Citrus Sinensis ID: 041914

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260----
Protein Sequence
MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR
Secondary Structure (PSIPRED)
ccccccccccccccccEEEEcccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEcccHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccEEcccccccccHHHHHHccccHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccccEEEEccccccc
Secondary Structure Prediction (SSPRO)
ccccccHHHHccccccEEEEcccccHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEcccccccccEcHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccEEEEEEcccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHcHHHHccccHHHHHHHHHccccccccccHHHHHHHHHHHHcHHHcHcccEEEEEccccccc
Coil and Loop (DISEMBL)
madssmcnaknklEGKVAIItggasgigeTTARLFADHGARMIVIADIQDELGRQVATsigvgkchyvhcdvtnecqVKALVDSTvqnygqldimfsnagilsssdqtvldldfSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAsvagscggkrrtdyhmSKHAVIGLVRSASvqlgvhgirvncvsphglatpltchaygmpadeveklfepqtplegvVLRAGHVADAVLFLACrdsefvtghdlvvdggflir
Flexible Loop (DISEMBL)
MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRdsefvtghdlvvdggflir
Low Complexity Region (SEG)
MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR
Disordered region (IsUnstruct)
*************EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI*
Disordered Region (DISOPRED)
***************KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV*KLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR
Disordered Region (DISEMBL)
*********KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR
Disordered Region (DISPRO)
***********KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	264	2.2.26 [Sep-21-2011]
Q94K41	257	Short-chain dehydrogenase	yes	no	0.939	0.964	0.54	4e-72
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.973	0.862	0.521	1e-68
O80714	258	Short-chain dehydrogenase	no	no	0.939	0.961	0.519	2e-67
F4J300	259	Short-chain dehydrogenase	no	no	0.931	0.949	0.525	3e-66
O80713	257	Short-chain dehydrogenase	no	no	0.928	0.953	0.515	4e-65
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	0.935	0.925	0.469	2e-55
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.981	0.854	0.432	2e-53
Q7FAE1	274	Momilactone A synthase OS	no	no	0.946	0.912	0.486	2e-50
P50160	336	Sex determination protein	N/A	no	0.939	0.738	0.425	6e-46
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.931	0.863	0.438	8e-45

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  271 bits (692), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 135/250 (54%), Positives = 178/250 (71%), Gaps = 2/250 (0%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GK+ IITGGASGIG  + RLF +HGAR +VI D+QDELG+ VA SIG  K  Y HCD
Sbjct: 5   RLDGKIVIITGGASGIGAESVRLFTEHGAR-VVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTNE +V+  V  TV+ YG+LD++FSNAG++     ++LDL+ +  DR  AIN+RG AA 
Sbjct: 64  VTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPF-VSILDLNLNELDRTIAINLRGTAAF 122

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           +KHAAR MVE G+RGSIVCT SVA    G     Y  SKH ++GL++SAS  LG +GIRV
Sbjct: 123 IKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRV 182

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P G+ATPL C+ + M  + VE+       L+G+VL+A HVA+A LFLA  +S +V+
Sbjct: 183 NGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVS 242

Query: 252 GHDLVVDGGF 261
           G +L VDGG+
Sbjct: 243 GQNLAVDGGY 252

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  259 bits (663), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 135/259 (52%), Positives = 179/259 (69%), Gaps = 2/259 (0%)

Query: 3   DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV 62
           + +M   +  L+GK+AIITGGASGIG    RLF DHGA+ +VI DIQ+ELG+ +A SIG+
Sbjct: 34  NKTMSGLRQVLDGKIAIITGGASGIGAEAVRLFTDHGAK-VVIVDIQEELGQNLAVSIGL 92

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
            K  +  C+VT+E  V+  V  TV+ +G+LD++FSNAG+L +   +VLDLD  AFDR  A
Sbjct: 93  DKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFG-SVLDLDLEAFDRTMA 151

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           +NVRG AA +KHAAR MV  G RGSIVCT S+A   GG     Y  SKHA++GL+RSA  
Sbjct: 152 VNVRGAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACA 211

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
            LG +GIRVN V+P+G+AT +T          +E+  E    L+GVVL+A H+A+A LFL
Sbjct: 212 GLGQYGIRVNGVAPYGVATGMTSAYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALFL 271

Query: 243 ACRDSEFVTGHDLVVDGGF 261
           A  DS +++G +LVVDGGF
Sbjct: 272 ASDDSVYISGQNLVVDGGF 290

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score =  255 bits (652), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 131/252 (51%), Positives = 175/252 (69%), Gaps = 4/252 (1%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +LEGK+ IITGGASGIG   ARLF DHGA+ +VI D+Q+ELG+ VA  IG  K  +  CD
Sbjct: 5   RLEGKIVIITGGASGIGADAARLFTDHGAK-VVIVDVQEELGQNVAVLIGKDKASFYRCD 63

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTNE +V+  V  TV+ +G+LD++FSNAG+L    ++ LD D   FDR+ A+NVRG AA 
Sbjct: 64  VTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPL-ESFLDFDLERFDRIMAVNVRGAAAF 122

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           +KHAAR MVE G RGSIVCT SV+   GG     Y  SKH ++GL+RSA   LG +GIRV
Sbjct: 123 IKHAARAMVEKGTRGSIVCTTSVSAEIGGGHHG-YTASKHGLVGLIRSACGDLGKYGIRV 181

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P+ +ATP+T H   +   ++E  F+ +  L+G+VL+A HVA   LFLA  DS +++
Sbjct: 182 NGVAPYAVATPMTSHDE-VTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYIS 240

Query: 252 GHDLVVDGGFLI 263
           G +L VDGG+ +
Sbjct: 241 GQNLAVDGGYTV 252

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score =  251 bits (642), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 135/257 (52%), Positives = 177/257 (68%), Gaps = 11/257 (4%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L+GK+ IITGGASGIG   ARLF DHGA+ +VI D+Q+ELG+ VA SIG+ K  +  C
Sbjct: 4   QRLDGKIVIITGGASGIGAEAARLFTDHGAK-VVIVDLQEELGQNVAVSIGLDKASFYRC 62

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+T+E +V+  V  TV+ +G+LD++FSNAG++     ++LDLD  AFDR  A+NVRG AA
Sbjct: 63  DITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHG-SILDLDLEAFDRTMAVNVRGAAA 121

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +KHAAR MV  G RGSIVCT SV    GG     Y  SKHA++GLVRSA   LG +GIR
Sbjct: 122 FIKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIR 181

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFE----PQTPLEGVVLRAGHVADAVLFLACRD 246
           VN V+P+G+AT LT +      +E  K+ E        L+GVVL+A HVADA LFLA  D
Sbjct: 182 VNGVAPYGVATGLTSY-----NEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDD 236

Query: 247 SEFVTGHDLVVDGGFLI 263
           S +++G +L VDGG+ +
Sbjct: 237 SVYISGQNLGVDGGYSV 253

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score =  248 bits (632), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 132/256 (51%), Positives = 173/256 (67%), Gaps = 11/256 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GK+AIITGGASGIG    RLF DHGA+ +VI D Q+ELG+ VA S+G  K  +  CD
Sbjct: 5   RLDGKIAIITGGASGIGAEAVRLFTDHGAK-VVIVDFQEELGQNVAVSVGKDKASFYRCD 63

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTNE +V+  V  TV+ YG+LD++FSNAG++     + LDL+   FDR  A+NVRG AA 
Sbjct: 64  VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG-SFLDLNLEQFDRTMAVNVRGAAAF 122

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           +KHAAR MVE G RGSIVCT SVA   GG     Y  SKHA++GLV+SA   LG +GIRV
Sbjct: 123 IKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRV 182

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP----LEGVVLRAGHVADAVLFLACRDS 247
           N V+P+ +AT +         +E  ++ E  +     L+GVVL+A HVA+A LFLA  DS
Sbjct: 183 NGVAPYAVATAINSR-----DEETVRMVEEYSAATGILKGVVLKARHVAEAALFLASDDS 237

Query: 248 EFVTGHDLVVDGGFLI 263
            +V+G +L VDGG+ +
Sbjct: 238 AYVSGQNLAVDGGYSV 253

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  215 bits (548), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/262 (46%), Positives = 169/262 (64%), Gaps = 15/262 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH--YVH 69
           +LEGKVA++TGGASGIGE+ ARLF +HGA+ I I D+QDELG+QV+  +G G  H  Y H
Sbjct: 2   RLEGKVALVTGGASGIGESIARLFIEHGAK-ICIVDVQDELGQQVSQRLG-GDPHACYFH 59

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT E  V+  VD T + YG +DIM +NAGI       + D DF+ F ++F INV G+ 
Sbjct: 60  CDVTVEDDVRRAVDFTAEKYGTIDIMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVF 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +KHAAR+M+   ++GSIV  ASV+    G     Y  +KHAV+GL +S + +LG HGI
Sbjct: 120 LGMKHAARIMIP-KMKGSIVSLASVSSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGI 178

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEK--------LFEPQTPLEGVVLRAGHVADAVLF 241
           RVNCVSP+ + T L+     +P  E+++               L+GV L    VA+AVL+
Sbjct: 179 RVNCVSPYAVPTRLSMPY--LPESEMQEDALRGFLTFVRSNANLKGVDLMPNDVAEAVLY 236

Query: 242 LACRDSEFVTGHDLVVDGGFLI 263
           LA  +S++V+G +LV+DGGF I
Sbjct: 237 LATEESKYVSGLNLVIDGGFSI 258

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  209 bits (532), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 119/275 (43%), Positives = 173/275 (62%), Gaps = 16/275 (5%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M +++      +LEGKVAIITGGA GIG+ T  LFA HGA  +VIAD+ +  G  +A S+
Sbjct: 20  MEETNTTLYPKRLEGKVAIITGGAHGIGKATVMLFARHGA-TVVIADVDNVAGSSLAKSL 78

Query: 61  GVGKCH----YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGIL--SSSDQTVLDLDF 114
              K      ++ CDV+ E  V+ LV+ TV  YG+LDI+F+NAG+L      +++LD D 
Sbjct: 79  SSHKTSPMVAFISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDA 138

Query: 115 SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
             FD +  +NVRG+   +KH AR M++ G +G I+ TASVAG  GG     Y  SKHA++
Sbjct: 139 DEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIV 198

Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA---------DEVEKLFEPQTPL 225
           GL ++A+ +LG +GIRVNC+SP G+AT +  +A+   +         +E+E+       L
Sbjct: 199 GLTKNAACELGKYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANL 258

Query: 226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
           +G  LRA  +A+A L+LA  +S++V GH+LVVDGG
Sbjct: 259 KGETLRANDIAEAALYLASDESKYVNGHNLVVDGG 293

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  199 bits (505), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/253 (48%), Positives = 158/253 (62%), Gaps = 3/253 (1%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           KL GKVA+ITGGASGIG  TARLF  HGAR +V+ADIQDELG  +   +G     YVHCD
Sbjct: 14  KLVGKVAVITGGASGIGACTARLFVKHGAR-VVVADIQDELGASLVAELGPDASSYVHCD 72

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTNE  V A VD  V  +G+LD+MF+NAG+       + +     F+R+ A+N+ G    
Sbjct: 73  VTNEGDVAAAVDHAVARFGKLDVMFNNAGVSGPPCFRMSECTKEDFERVLAVNLVGPFLG 132

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            KHAARVM     RGSI+ TAS++ S  G     Y  SKHA++G   +A+ +LG HGIRV
Sbjct: 133 TKHAARVMAPA-RRGSIISTASLSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRV 191

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV-VLRAGHVADAVLFLACRDSEFV 250
           NCVSP G+ATPL   A GM  + +E +      L+G   L+A  +A A LFLA  D  +V
Sbjct: 192 NCVSPAGVATPLARAAMGMDDEAIEAIMANSANLKGAGALKADDIAAAALFLASDDGRYV 251

Query: 251 TGHDLVVDGGFLI 263
           +G +L VDGG  +
Sbjct: 252 SGQNLRVDGGLSV 264

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score =  184 bits (467), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/280 (42%), Positives = 169/280 (60%), Gaps = 32/280 (11%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
             +L+GKVAI+TGGA GIGE   RLFA HGAR +VIADI D  G  +A+++G  +  +V 
Sbjct: 50  PKRLDGKVAIVTGGARGIGEAIVRLFAKHGAR-VVIADIDDAAGEALASALGP-QVSFVR 107

Query: 70  CDVTNECQVKALVDSTVQNYG-QLDIMFSNAGIL---SSSDQTVLDLDFSAFDRLFAINV 125
           CDV+ E  V+  VD  +  +G +LD+  +NAG+L   + + +++L  D + FDR+  +N 
Sbjct: 108 CDVSVEDDVRRAVDWALSRHGGRLDVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNA 167

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G A  +KHAAR M      GSIV  ASVA   GG     Y  SKHA++GL ++A+ +L 
Sbjct: 168 LGAALGMKHAARAMAPR-RAGSIVSVASVAAVLGGLGPHAYTASKHAIVGLTKNAACELR 226

Query: 186 VHGIRVNCVSPHGLATPLTCHAY---------------------GMPAD-EVEKLFE--- 220
            HG+RVNCVSP G+ATP+  +A+                      +P+D EVEK+ E   
Sbjct: 227 AHGVRVNCVSPFGVATPMLINAWRQGHDDATADADRDLDLDLDVTVPSDQEVEKMEEVVR 286

Query: 221 PQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
               L+G  LR   +A+AVLFLA  ++ +++GH+LVVDGG
Sbjct: 287 GLATLKGPTLRPRDIAEAVLFLASDEARYISGHNLVVDGG 326

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score =  180 bits (457), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/262 (43%), Positives = 158/262 (60%), Gaps = 16/262 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH----Y 67
           +L GKVA+ITGGA+GIGE+  RLF  HGA+ + I D+QD+LG +V  S+  G+      +
Sbjct: 17  RLLGKVALITGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGGEVCKSLLRGESKETAFF 75

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +H DV  E  +   VD  V+N+G LDI+ +NAG+  +    + +   S F+  F +NV+G
Sbjct: 76  IHGDVRVEDDISNAVDFAVKNFGTLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKG 135

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               +KHAARVM+    +GSIV   SV G  GG     Y  SKHAV+GL RS + +LG H
Sbjct: 136 AFLSMKHAARVMIPEK-KGSIVSLCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQH 194

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADE-VEKLF-------EPQTPLEGVVLRAGHVADAV 239
           GIRVNCVSP+ +AT L      +P +E  E  F            L+GV L    VA+AV
Sbjct: 195 GIRVNCVSPYAVATKLALAH--LPEEERTEDAFVGFRNFAAANANLKGVELTVDDVANAV 252

Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
           LFLA  DS +++G +L++DGGF
Sbjct: 253 LFLASDDSRYISGDNLMIDGGF 274

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
224135649	265	predicted protein [Populus trichocarpa]	0.988	0.984	0.739	1e-107
225456658	260	PREDICTED: momilactone A synthase [Vitis	0.977	0.992	0.754	1e-106
255540903	260	short chain alcohol dehydrogenase, putat	0.965	0.980	0.741	1e-104
147860589	426	hypothetical protein VITISV_039801 [Viti	0.928	0.575	0.760	1e-101
356508598	268	PREDICTED: momilactone A synthase-like [	0.984	0.970	0.720	2e-97
357497085	265	Short-chain alcohol dehydrogenase [Medic	0.988	0.984	0.659	4e-95
225456656	262	PREDICTED: momilactone A synthase [Vitis	0.981	0.988	0.664	7e-95
356509515	280	PREDICTED: momilactone A synthase-like [	0.954	0.9	0.694	3e-94
356519033	281	PREDICTED: sex determination protein tas	0.962	0.903	0.705	3e-94
357497135	264	Short-chain alcohol dehydrogenase [Medic	0.988	0.988	0.678	1e-92

>gi|224135649|ref|XP_002322126.1| predicted protein [Populus trichocarpa] gi|222869122|gb|EEF06253.1| predicted protein [Populus trichocarpa]

 Score =  392 bits (1008), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 193/261 (73%), Positives = 220/261 (84%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG 63
           SS  +  NKL GKVAIITGGASGIGE TARLFA HGA ++VIADIQDELG QVATSIG  
Sbjct: 5   SSTPSDNNKLAGKVAIITGGASGIGEATARLFAQHGALIVVIADIQDELGHQVATSIGQQ 64

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
           KC Y+HCDVT+E QVK+LV+ TV+N+G+LDIMFSNAGIL SSDQT+L+LD S FDRLFAI
Sbjct: 65  KCSYMHCDVTDEEQVKSLVEWTVKNFGRLDIMFSNAGILGSSDQTILNLDLSGFDRLFAI 124

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           N RGMA CVKHAARVMVE  +RGSIVCTASVA S GG+RRTDYHMSKHAV+GLVRSAS+Q
Sbjct: 125 NARGMATCVKHAARVMVEHRLRGSIVCTASVAASNGGRRRTDYHMSKHAVLGLVRSASMQ 184

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           LGVHGIRVNCVSP+GL TP+T HA+    +E+E ++E    L+G  L A HVADAVLFLA
Sbjct: 185 LGVHGIRVNCVSPYGLVTPMTLHAHRKGVEELENMYETNMSLKGAALTAKHVADAVLFLA 244

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
           C DSE VTGHDL+VDGG+ I+
Sbjct: 245 CNDSEMVTGHDLLVDGGYRIQ 265

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456658|ref|XP_002271524.1| PREDICTED: momilactone A synthase [Vitis vinifera]

 Score =  389 bits (998), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 197/261 (75%), Positives = 224/261 (85%), Gaps = 3/261 (1%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M +SS+C  KNKLEGKVAIITGGASGIGE TAR+F++HGAR I+IADIQDELG+ +A+SI
Sbjct: 1   MGESSVC--KNKLEGKVAIITGGASGIGEATARVFSEHGARAIIIADIQDELGQNLASSI 58

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
           G   C ++HCDVTNE QVK++V+ TVQ YGQLDIMFSNAGI++ SDQTVLDL+FSAFDRL
Sbjct: 59  GSHFCTFIHCDVTNEDQVKSMVEWTVQKYGQLDIMFSNAGIVNRSDQTVLDLEFSAFDRL 118

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           FA+NVRGMAACVKHAAR MV+ GV+G IVCTASVAGS G  RRTDY MSKHAV+GLVRSA
Sbjct: 119 FAVNVRGMAACVKHAARAMVDRGVKGCIVCTASVAGSHGMGRRTDYCMSKHAVVGLVRSA 178

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
           S QLG HGIRVNCVSPHG+ATP+ C A  M ADEVEK++E +T L+G VLRA HVADAVL
Sbjct: 179 SKQLGEHGIRVNCVSPHGIATPMMCKALEMEADEVEKVYEARTRLKG-VLRARHVADAVL 237

Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           FLA   S FVTGHDL VDGGF
Sbjct: 238 FLASDQSAFVTGHDLSVDGGF 258

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255540903|ref|XP_002511516.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223550631|gb|EEF52118.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  384 bits (986), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 189/255 (74%), Positives = 214/255 (83%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
           K KL GKVAIITGGASGIGE  ARL ADHGA M+VIADIQD++G+ VATSIG  KC YVH
Sbjct: 6   KKKLSGKVAIITGGASGIGEAAARLLADHGASMVVIADIQDQVGQDVATSIGTNKCSYVH 65

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT E QVK+LV+ TVQ++G+LDIMFSNAGIL SS+QTVLDLD SAFD LFAINVRGMA
Sbjct: 66  CDVTKEEQVKSLVEWTVQSFGKLDIMFSNAGILGSSEQTVLDLDLSAFDHLFAINVRGMA 125

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            CVK+AAR MVEGGVRGSIVCTASV GS G + RTDY MSKHAV+GLVR+ASVQLG HGI
Sbjct: 126 TCVKYAARAMVEGGVRGSIVCTASVGGSRGFRMRTDYTMSKHAVVGLVRAASVQLGGHGI 185

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RVN VSP+G+ATP+T + Y   A+EVE L+EP   L+GV  +A ++ADAVLFLAC +S  
Sbjct: 186 RVNSVSPYGVATPMTMNVYNKSAEEVESLYEPNMTLKGVATKARNIADAVLFLACDESAV 245

Query: 250 VTGHDLVVDGGFLIR 264
           VTGHDLVVDGGFL R
Sbjct: 246 VTGHDLVVDGGFLTR 260

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147860589|emb|CAN83971.1| hypothetical protein VITISV_039801 [Vitis vinifera]

 Score =  372 bits (956), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 187/246 (76%), Positives = 212/246 (86%), Gaps = 1/246 (0%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           KVAIITGGASGIGE TAR+F++HGAR I+IADIQDELG+ +A+SIG   C ++HCDVTNE
Sbjct: 180 KVAIITGGASGIGEATARVFSEHGARAIIIADIQDELGQNLASSIGSHFCTFIHCDVTNE 239

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
            QVK++V+ TVQ YGQLDIMFSNAGI++ SDQTVLDL+FSAFDRLFA+NVRGMAACVKHA
Sbjct: 240 DQVKSMVEWTVQKYGQLDIMFSNAGIVNRSDQTVLDLEFSAFDRLFAVNVRGMAACVKHA 299

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
           AR MV+ GV+G IVCTASVAGS G  RRTDY MSKHAV+GLVRSAS QLG HGIRVNCVS
Sbjct: 300 ARAMVDRGVKGCIVCTASVAGSHGMGRRTDYCMSKHAVVGLVRSASKQLGEHGIRVNCVS 359

Query: 196 PHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL 255
           PHG+ATP+ C A  M ADEVEK++E +T L+G VLRA HVADAVLFLA   S FVTGHDL
Sbjct: 360 PHGIATPMMCKALEMEADEVEKVYEARTRLKG-VLRARHVADAVLFLASDQSAFVTGHDL 418

Query: 256 VVDGGF 261
            VDGGF
Sbjct: 419 SVDGGF 424

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508598|ref|XP_003523042.1| PREDICTED: momilactone A synthase-like [Glycine max]

 Score =  360 bits (925), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 188/261 (72%), Positives = 209/261 (80%), Gaps = 1/261 (0%)

Query: 2   ADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG 61
           A+S   + + KL GKVAIITGGASGIGE TARLFA HGARM+VIADIQD+LG QVA SIG
Sbjct: 5   ANSIHNSGQKKLAGKVAIITGGASGIGEETARLFAHHGARMVVIADIQDDLGIQVAASIG 64

Query: 62  VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
             +C YV CDVT+E QVK LVDSTV  +GQLDIMFSNAGILS SDQT+LDLDFSA+DRL 
Sbjct: 65  SHRCSYVRCDVTDEDQVKNLVDSTVNAHGQLDIMFSNAGILSPSDQTILDLDFSAYDRLL 124

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
           A+N RG AACVKHAAR MVE  VRGSIVCTASV+ S GG RRTDY MSKHAV GL+R+AS
Sbjct: 125 AVNARGTAACVKHAARSMVERRVRGSIVCTASVSASHGGLRRTDYVMSKHAVKGLMRAAS 184

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAY-GMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
            QLG HG+RVNCVSP GL TPLT  A+  M   E++K +   + L+GV L   HVADAVL
Sbjct: 185 AQLGAHGVRVNCVSPSGLTTPLTRAAHAAMETKELQKQYAQSSRLKGVFLTPKHVADAVL 244

Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           FLAC DSEFVTGHDLVVDG F
Sbjct: 245 FLACGDSEFVTGHDLVVDGCF 265

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497085|ref|XP_003618831.1| Short-chain alcohol dehydrogenase [Medicago truncatula] gi|355493846|gb|AES75049.1| Short-chain alcohol dehydrogenase [Medicago truncatula]

 Score =  353 bits (906), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 172/261 (65%), Positives = 204/261 (78%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           MA++   N   +L GK+AI+TGGASGIGE TAR+FA+ G R++VIADIQDELG QVA SI
Sbjct: 1   MAEAPSSNTNLRLSGKIAIVTGGASGIGEATARVFANEGVRVVVIADIQDELGNQVAASI 60

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
           G  +C Y+HCDVT+E QVK LV STV  YGQ+DIMFSNAGI S +DQT+++LD S FDRL
Sbjct: 61  GSQRCTYIHCDVTDEDQVKNLVQSTVDTYGQVDIMFSNAGIASPTDQTIMELDMSQFDRL 120

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           FA+NV+GMA CVKHAAR MVEG +RGSIVCT SV+   GG R TDY MSKHAV+GL+R+A
Sbjct: 121 FAVNVQGMALCVKHAARAMVEGRIRGSIVCTGSVSCRQGGPRSTDYTMSKHAVLGLMRAA 180

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
           SVQL  HGIRVNCVSP GLATPLTC   GM  ++ ++ ++    LEGVVL   HVADAVL
Sbjct: 181 SVQLAAHGIRVNCVSPSGLATPLTCKLLGMSEEKTQETYQKYARLEGVVLTPKHVADAVL 240

Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           FL    +EF+TG DL VDGGF
Sbjct: 241 FLVSDQAEFITGLDLRVDGGF 261

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225456656|ref|XP_002267041.1| PREDICTED: momilactone A synthase [Vitis vinifera]

 Score =  352 bits (904), Expect = 7e-95,   Method: Compositional matrix adjust.
 Identities = 174/262 (66%), Positives = 209/262 (79%), Gaps = 3/262 (1%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M D +  N   KL+GKVAIITGGASGIGE TARLFADHGAR +V+ADIQDELGR VA SI
Sbjct: 1   MTDPTPFN--KKLQGKVAIITGGASGIGEATARLFADHGARAVVVADIQDELGRGVAESI 58

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
           G+ +C Y+HCDVT+E Q+KA+V+STV+ +GQLDIMFSNAG++S  DQT+L+LD SA D++
Sbjct: 59  GLHRCRYIHCDVTDEQQIKAMVESTVKMFGQLDIMFSNAGVMSMGDQTILELDLSASDKV 118

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           FA+N RGMAACVKHAAR MVEGGV+GSIVCTASVA + G  + TDY MSKHAV+GLVRSA
Sbjct: 119 FAVNARGMAACVKHAARAMVEGGVKGSIVCTASVAATVGNDKFTDYIMSKHAVLGLVRSA 178

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV-VLRAGHVADAV 239
           S QLG +GIRVNCVSP  +ATP+ C A+ M  +E EK F     L+G   ++  HV DA 
Sbjct: 179 SKQLGAYGIRVNCVSPTAVATPMLCSAFKMGVEEAEKFFVEDMDLKGRGAVQVRHVGDAA 238

Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
           LFLA  DSEF+TGH+L +DGGF
Sbjct: 239 LFLASDDSEFITGHNLAIDGGF 260

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356509515|ref|XP_003523493.1| PREDICTED: momilactone A synthase-like [Glycine max]

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 175/252 (69%), Positives = 200/252 (79%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ KVAI+TGGASGIGE TAR+FA+ GARM+V+ADIQDELG QVA SIG  +C Y+HCD
Sbjct: 18  RLKAKVAIVTGGASGIGEATARVFAEQGARMVVLADIQDELGNQVAASIGTQRCTYIHCD 77

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +E QV+ LV STV  YGQ+DIMFSNAGILS S QTV +LD S  DRLFA+NVRGMAAC
Sbjct: 78  VADEEQVQNLVQSTVDAYGQVDIMFSNAGILSPSQQTVPELDMSQLDRLFAVNVRGMAAC 137

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           VKHAAR M+EG VRGSIVCTASV GS GG   TDY MSKHAV+GL+RSASVQL  HGIRV
Sbjct: 138 VKHAARAMLEGRVRGSIVCTASVGGSHGGPNATDYIMSKHAVLGLMRSASVQLAEHGIRV 197

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           NCVSP+GLATPLTC   GM  +E ++++     L+GVVL   HVADAVLFL   DS FVT
Sbjct: 198 NCVSPNGLATPLTCKQRGMSEEEGQEVYRKYARLQGVVLTPKHVADAVLFLVSDDSAFVT 257

Query: 252 GHDLVVDGGFLI 263
             DL VDGGF +
Sbjct: 258 ALDLRVDGGFTL 269

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356519033|ref|XP_003528179.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]

 Score =  350 bits (898), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 180/255 (70%), Positives = 203/255 (79%), Gaps = 1/255 (0%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
           + KL GKVAIITGGASGIGE TA LFA HGA M+VIADIQD+LG  VA SI   +C YV 
Sbjct: 13  QKKLAGKVAIITGGASGIGEETACLFAQHGAGMVVIADIQDDLGNLVAASIASHRCSYVR 72

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT E QVK LVDSTV  +GQLDIMFSNAGILSSSDQT+LDL+ S +DRL A+N RGMA
Sbjct: 73  CDVTEEVQVKNLVDSTVNAHGQLDIMFSNAGILSSSDQTILDLNLSEYDRLLAVNARGMA 132

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
           ACVKHAAR +VE  VRGSIVCTASV+ S GG  RTDY MSKHAV GLVR+AS QLGVHG+
Sbjct: 133 ACVKHAARAIVERRVRGSIVCTASVSASHGGLWRTDYVMSKHAVKGLVRAASAQLGVHGV 192

Query: 190 RVNCVSPHGLATPLTCHAY-GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           RVNCVSP GLATPLT  A+  M   E++K +   + L+G+VL   H+ADAVLFLAC D E
Sbjct: 193 RVNCVSPSGLATPLTRGAHAAMETHELQKQYAQSSWLKGIVLTPKHIADAVLFLACGDLE 252

Query: 249 FVTGHDLVVDGGFLI 263
           FVTGHDLVVDG F++
Sbjct: 253 FVTGHDLVVDGSFVL 267

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357497135|ref|XP_003618856.1| Short-chain alcohol dehydrogenase [Medicago truncatula] gi|355493871|gb|AES75074.1| Short-chain alcohol dehydrogenase [Medicago truncatula]

 Score =  345 bits (885), Expect = 1e-92,   Method: Compositional matrix adjust.
 Identities = 177/261 (67%), Positives = 206/261 (78%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           MA++   N   +L GKVAI+TGGASGIGE TAR+FA+ G R++VIADIQDELG QVA SI
Sbjct: 1   MAEAPSTNTTLRLSGKVAIVTGGASGIGEATARVFANEGTRVVVIADIQDELGNQVAASI 60

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
           G  +C Y+HCDVT+E QVK LV STV  YGQLDIMFSNAGI+SS+ QT+++LD S  DRL
Sbjct: 61  GNQRCTYIHCDVTDEDQVKNLVQSTVNTYGQLDIMFSNAGIISSTAQTIMELDMSQLDRL 120

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           FA+NVRGM+ CVKHAAR MVEG VRGSIVCT SV GS GG R TDY MSKHAV+GL+R+A
Sbjct: 121 FAVNVRGMSLCVKHAARAMVEGHVRGSIVCTGSVGGSRGGSRSTDYTMSKHAVLGLMRAA 180

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
           SVQL  HGIRVN VSP+GLATPLTC   GM  +E ++ ++    LEGVVL   HVADAVL
Sbjct: 181 SVQLAAHGIRVNSVSPNGLATPLTCKLLGMSNEEAQENYKNYARLEGVVLTPKHVADAVL 240

Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           FL    +EFVTG DL+VDGGF
Sbjct: 241 FLVSNQAEFVTGLDLIVDGGF 261

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	264
UNIPROTKB|Q5C9I9	265	Q5C9I9 "(-)-isopiperitenol deh	0.962	0.958	0.6	4.1e-72
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.946	0.972	0.535	4e-67
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.977	0.865	0.526	3.2e-65
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.939	0.961	0.519	2.3e-64
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.939	0.957	0.533	2e-63
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.943	0.968	0.523	3.4e-61
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.939	0.818	0.454	1.1e-53
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.973	0.749	0.445	2.1e-52
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.946	0.816	0.45	6.5e-51
TAIR|locus:2088419	300	AT3G26760 [Arabidopsis thalian	0.946	0.833	0.421	1.1e-50

UNIPROTKB|Q5C9I9 Q5C9I9 "(-)-isopiperitenol dehydrogenase" [Mentha x piperita (taxid:34256)]

 Score = 729 (261.7 bits), Expect = 4.1e-72, P = 4.1e-72
 Identities = 153/255 (60%), Positives = 182/255 (71%)

Query:     6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
             M + K KL GKVAI+TGGASGIGE TARLFA+ GAR +VIAD+Q E G  VA SIG  +C
Sbjct:     1 MASVK-KLAGKVAIVTGGASGIGEVTARLFAERGARAVVIADMQPEKGGTVAESIGGRRC 59

Query:    66 HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
              YVHCD+T+E QV+++VD T   YG +D+MF NAG  S++ QTVLDLD + FDR+  +N 
Sbjct:    60 SYVHCDITDEQQVRSVVDWTAATYGGVDVMFCNAGTASATAQTVLDLDLAQFDRVMRVNA 119

Query:   126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
             RG AACVK AAR MVE G  G+I+CTAS      G   TDY MSK  V+GLVRSAS+QLG
Sbjct:   120 RGTAACVKQAARKMVELGRGGAIICTASATVHHAGPNLTDYIMSKCGVLGLVRSASLQLG 179

Query:   186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             VHGIRVN VSP  LATPLT       A +VE  +   T L+GV + A HVA+AV FLA  
Sbjct:   180 VHGIRVNSVSPTALATPLTATIGLRTAADVESFYGQVTSLKGVAITAEHVAEAVAFLASD 239

Query:   246 DSEFVTGHDLVVDGG 260
             ++ FVTGHDL VDGG
Sbjct:   240 EAAFVTGHDLAVDGG 254

GO:0000166 "nucleotide binding" evidence=IDA

GO:0018458 "isopiperitenol dehydrogenase activity" evidence=IDA

GO:0018459 "carveol dehydrogenase activity" evidence=IDA

GO:0031525 "menthol biosynthetic process" evidence=IDA

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 682 (245.1 bits), Expect = 4.0e-67, P = 4.0e-67
 Identities = 135/252 (53%), Positives = 179/252 (71%)

Query:    12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             +L+GK+ IITGGASGIG  + RLF +HGAR +VI D+QDELG+ VA SIG  K  Y HCD
Sbjct:     5 RLDGKIVIITGGASGIGAESVRLFTEHGAR-VVIVDVQDELGQNVAVSIGEDKASYYHCD 63

Query:    72 VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
             VTNE +V+  V  TV+ YG+LD++FSNAG++     ++LDL+ +  DR  AIN+RG AA 
Sbjct:    64 VTNETEVENAVKFTVEKYGKLDVLFSNAGVIEPF-VSILDLNLNELDRTIAINLRGTAAF 122

Query:   132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
             +KHAAR MVE G+RGSIVCT SVA    G     Y  SKH ++GL++SAS  LG +GIRV
Sbjct:   123 IKHAARAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRV 182

Query:   192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
             N V+P G+ATPL C+ + M  + VE+       L+G+VL+A HVA+A LFLA  +S +V+
Sbjct:   183 NGVAPFGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKARHVAEAALFLASDESAYVS 242

Query:   252 GHDLVVDGGFLI 263
             G +L VDGG+ +
Sbjct:   243 GQNLAVDGGYSV 254

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 664 (238.8 bits), Expect = 3.2e-65, P = 3.2e-65
 Identities = 138/262 (52%), Positives = 184/262 (70%)

Query:     3 DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV 62
             + +M   +  L+GK+AIITGGASGIG    RLF DHGA+ +VI DIQ+ELG+ +A SIG+
Sbjct:    34 NKTMSGLRQVLDGKIAIITGGASGIGAEAVRLFTDHGAK-VVIVDIQEELGQNLAVSIGL 92

Query:    63 GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
              K  +  C+VT+E  V+  V  TV+ +G+LD++FSNAG+L +   +VLDLD  AFDR  A
Sbjct:    93 DKASFYRCNVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFG-SVLDLDLEAFDRTMA 151

Query:   123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
             +NVRG AA +KHAAR MV  G RGSIVCT S+A   GG     Y  SKHA++GL+RSA  
Sbjct:   152 VNVRGAAAFIKHAARSMVASGTRGSIVCTTSIAAEIGGPGPHSYTASKHALLGLIRSACA 211

Query:   183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVADAVLF 241
              LG +GIRVN V+P+G+AT +T  AY   A ++ E+  E    L+GVVL+A H+A+A LF
Sbjct:   212 GLGQYGIRVNGVAPYGVATGMTS-AYNEEAVKMLEEYGEALGNLKGVVLKARHIAEAALF 270

Query:   242 LACRDSEFVTGHDLVVDGGFLI 263
             LA  DS +++G +LVVDGGF +
Sbjct:   271 LASDDSVYISGQNLVVDGGFSV 292

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 131/252 (51%), Positives = 175/252 (69%)

Query:    12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             +LEGK+ IITGGASGIG   ARLF DHGA+ +VI D+Q+ELG+ VA  IG  K  +  CD
Sbjct:     5 RLEGKIVIITGGASGIGADAARLFTDHGAK-VVIVDVQEELGQNVAVLIGKDKASFYRCD 63

Query:    72 VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
             VTNE +V+  V  TV+ +G+LD++FSNAG+L   + + LD D   FDR+ A+NVRG AA 
Sbjct:    64 VTNETEVEDAVKFTVEKHGKLDVLFSNAGVLEPLE-SFLDFDLERFDRIMAVNVRGAAAF 122

Query:   132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
             +KHAAR MVE G RGSIVCT SV+   GG     Y  SKH ++GL+RSA   LG +GIRV
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVSAEIGGGHH-GYTASKHGLVGLIRSACGDLGKYGIRV 181

Query:   192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
             N V+P+ +ATP+T H   +   ++E  F+ +  L+G+VL+A HVA   LFLA  DS +++
Sbjct:   182 NGVAPYAVATPMTSHDE-VTGKQLEDYFDAKGILKGMVLKASHVAQVALFLASDDSAYIS 240

Query:   252 GHDLVVDGGFLI 263
             G +L VDGG+ +
Sbjct:   241 GQNLAVDGGYTV 252

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 647 (232.8 bits), Expect = 2.0e-63, P = 2.0e-63
 Identities = 135/253 (53%), Positives = 176/253 (69%)

Query:    12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             +L+GK+ IITGGASGIG   ARLF DHGA+ +VI D+Q+ELG+ VA SIG+ K  +  CD
Sbjct:     5 RLDGKIVIITGGASGIGAEAARLFTDHGAK-VVIVDLQEELGQNVAVSIGLDKASFYRCD 63

Query:    72 VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
             +T+E +V+  V  TV+ +G+LD++FSNAG++     ++LDLD  AFDR  A+NVRG AA 
Sbjct:    64 ITDETEVENAVKFTVEKHGKLDVLFSNAGVMEPHG-SILDLDLEAFDRTMAVNVRGAAAF 122

Query:   132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
             +KHAAR MV  G RGSIVCT SV    GG     Y  SKHA++GLVRSA   LG +GIRV
Sbjct:   123 IKHAARSMVASGTRGSIVCTTSVTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRV 182

Query:   192 NCVSPHGLATPLTCHAYGMPADE-VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
             N V+P+G+AT LT  +Y     + VE        L+GVVL+A HVADA LFLA  DS ++
Sbjct:   183 NGVAPYGVATGLT--SYNEETVKMVEDYCSATAILKGVVLKARHVADAALFLASDDSVYI 240

Query:   251 TGHDLVVDGGFLI 263
             +G +L VDGG+ +
Sbjct:   241 SGQNLGVDGGYSV 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 626 (225.4 bits), Expect = 3.4e-61, P = 3.4e-61
 Identities = 132/252 (52%), Positives = 170/252 (67%)

Query:    12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             +L+GK+AIITGGASGIG    RLF DHGA+ +VI D Q+ELG+ VA S+G  K  +  CD
Sbjct:     5 RLDGKIAIITGGASGIGAEAVRLFTDHGAK-VVIVDFQEELGQNVAVSVGKDKASFYRCD 63

Query:    72 VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
             VTNE +V+  V  TV+ YG+LD++FSNAG++     + LDL+   FDR  A+NVRG AA 
Sbjct:    64 VTNEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG-SFLDLNLEQFDRTMAVNVRGAAAF 122

Query:   132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
             +KHAAR MVE G RGSIVCT SVA   GG     Y  SKHA++GLV+SA   LG +GIRV
Sbjct:   123 IKHAARAMVEKGTRGSIVCTTSVASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRV 182

Query:   192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
             N V+P+ +AT +           VE+       L+GVVL+A HVA+A LFLA  DS +V+
Sbjct:   183 NGVAPYAVATAINSRDEET-VRMVEEYSAATGILKGVVLKARHVAEAALFLASDDSAYVS 241

Query:   252 GHDLVVDGGFLI 263
             G +L VDGG+ +
Sbjct:   242 GQNLAVDGGYSV 253

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
 Identities = 120/264 (45%), Positives = 171/264 (64%)

Query:    12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH----Y 67
             +LEGKVAIITGGA GIG+ T  LFA HGA  +VIAD+ +  G  +A S+   K      +
Sbjct:    31 RLEGKVAIITGGAHGIGKATVMLFARHGAT-VVIADVDNVAGSSLAKSLSSHKTSPMVAF 89

Query:    68 VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQ--TVLDLDFSAFDRLFAINV 125
             + CDV+ E  V+ LV+ TV  YG+LDI+F+NAG+L    +  ++LD D   FD +  +NV
Sbjct:    90 ISCDVSVEADVENLVNVTVARYGRLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV 149

Query:   126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
             RG+   +KH AR M++ G +G I+ TASVAG  GG     Y  SKHA++GL ++A+ +LG
Sbjct:   150 RGVGLGMKHGARAMIKRGFKGCIISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELG 209

Query:   186 VHGIRVNCVSPHGLATPLTCHAYGMPA------DEVEKLFE---PQTPLEGVVLRAGHVA 236
              +GIRVNC+SP G+AT +  +A+   +      D+VE++ E       L+G  LRA  +A
Sbjct:   210 KYGIRVNCISPFGVATSMLVNAWRKTSGGDVEDDDVEEMEEFVRSLANLKGETLRANDIA 269

Query:   237 DAVLFLACRDSEFVTGHDLVVDGG 260
             +A L+LA  +S++V GH+LVVDGG
Sbjct:   270 EAALYLASDESKYVNGHNLVVDGG 293

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 118/265 (44%), Positives = 163/265 (61%)

Query:     2 ADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG 61
             + SS  +   KLEGKVA+ITGGASGIG+ TA  F  HGA+ ++IADIQ ++GR+    +G
Sbjct:    67 SSSSSHSTSRKLEGKVALITGGASGIGKATAGKFISHGAK-VIIADIQPQIGRETEQELG 125

Query:    62 VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
                C Y  CDVT E  +   VD  V  + +LDIM++NAGI   +  +++DLD + FD++ 
Sbjct:   126 PS-CAYFPCDVTKESDIANAVDFAVSLHTKLDIMYNNAGIPCKTPPSIVDLDLNVFDKVI 184

Query:   122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
               NVRG+ A +KHAARVM+     GSI+C  SV G  GG  +  Y +SK AVIG+VRS +
Sbjct:   185 NTNVRGVMAGIKHAARVMIPRN-SGSIICAGSVTGMMGGLAQHTYSVSKSAVIGIVRSTA 243

Query:   182 VQLGVHGIRVNCVSPHGLATPLTC----HAY-GMPADEVEKLFEPQTPLEGVVLRAGHVA 236
              +L  H IRVNC+SP  + T          Y G+    + ++ +    L G V     VA
Sbjct:   244 SELCKHRIRVNCISPFAITTSFVMDEMRQIYPGVDDSRLIQIVQSTGVLNGEVCEPTDVA 303

Query:   237 DAVLFLACRDSEFVTGHDLVVDGGF 261
             +A ++LA  DS++V GH+LVVDGGF
Sbjct:   304 NAAVYLASDDSKYVNGHNLVVDGGF 328

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 117/260 (45%), Positives = 162/260 (62%)

Query:     7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH 66
             C +K KLEGKVA+ITGGASG+G+ TA  F  HGAR +VIAD+  E G + A  +G  +  
Sbjct:    36 CTSK-KLEGKVALITGGASGLGKATASEFLRHGAR-VVIADLDAETGTKTAKELG-SEAE 92

Query:    67 YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSS-SDQTVLDLDFSAFDRLFAINV 125
             +V CDVT E  +   V+ TV+ YG+LD+M++NAGI+   +  ++  LD + F+R+  INV
Sbjct:    93 FVRCDVTVEADIAGAVEMTVERYGKLDVMYNNAGIVGPMTPASISQLDMTEFERVMRINV 152

Query:   126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
              G+ + +KHAA+ M+     G I+CT+SVAG  GG     Y +SK    G+V+SA+ +L 
Sbjct:   153 FGVVSGIKHAAKFMIPAR-SGCILCTSSVAGVTGGLAPHSYTISKFTTPGIVKSAASELC 211

Query:   186 VHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEP---QTPLEGVVLRAGHVADAVL 240
              HG+R+NC+SP  +ATPLT        P    EKL E       L+G       VA A L
Sbjct:   212 EHGVRINCISPGTVATPLTLSYLQKVFPKVSEEKLRETVKGMGELKGAECEEADVAKAAL 271

Query:   241 FLACRDSEFVTGHDLVVDGG 260
             +LA  D ++VTGH+LVVDGG
Sbjct:   272 YLASNDGKYVTGHNLVVDGG 291

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

TAIR|locus:2088419 AT3G26760 [Arabidopsis thaliana (taxid:3702)]

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 110/261 (42%), Positives = 163/261 (62%)

Query:     9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV 68
             +  KLEGKVA+ITGGASGIG+ TA  F   GA++I++ DI +E G  VAT +G    H++
Sbjct:    32 SSRKLEGKVAVITGGASGIGKATAEEFVSQGAQVIIV-DIDEEAGHMVATELG-SAAHFL 89

Query:    69 HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSS-SDQTVLDLDFSAFDRLFAINVRG 127
              CDVT E Q+   V++ V  +G+LD+M ++AGI  S S  ++ DLD   +D++  +NVRG
Sbjct:    90 RCDVTEEEQIAKAVETAVTRHGKLDVMLNSAGISCSISPPSIADLDMDTYDKVMRLNVRG 149

Query:   128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                 +KHAAR M+  G  GSI+C +S++G  GG     Y +SK  + G+V++ + +L  H
Sbjct:   150 TVLGIKHAARAMIPAG-SGSILCLSSISGLMGGLGPHAYSISKFTIPGVVKTVASELCKH 208

Query:   188 GIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
             G+R+NC+SP G+ TPLT   +        +  +++  +      L+G       VA A L
Sbjct:   209 GLRINCISPAGIPTPLTLRMFREAFAGHSIREEQLLAIVNATGELKGEKCEEIDVAKAAL 268

Query:   241 FLACRDSEFVTGHDLVVDGGF 261
             +LA  D++FVTGH+LVVDGGF
Sbjct:   269 YLASDDAKFVTGHNLVVDGGF 289

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0008270 "zinc ion binding" evidence=IDA

GO:0009733 "response to auxin stimulus" evidence=RCA

GO:0009741 "response to brassinosteroid stimulus" evidence=RCA

GO:0005739 "mitochondrion" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9X248	FABG_THEMA	1, ., 1, ., 1, ., 1, 0, 0	0.3582	0.9204	0.9878	yes	no
Q5TJF5	DHB8_CANFA	1, ., 1, ., 1, ., 6, 3	0.3148	0.8939	0.9111	yes	no
P46331	YXBG_BACSU	1, ., -, ., -, ., -	0.3618	0.9318	0.9010	yes	no
Q92506	DHB8_HUMAN	1, ., 1, ., 1, ., 6, 3	0.3068	0.9318	0.9425	yes	no
Q94K41	SDR3B_ARATH	1, ., 1, ., 1, ., -	0.54	0.9393	0.9649	yes	no
Q59787	DHSO_RHOSH	1, ., 1, ., 1, ., 1, 4	0.3320	0.9242	0.9531	yes	no
Q9PKF7	FABG_CHLMU	1, ., 1, ., 1, ., 1, 0, 0	0.3174	0.9090	0.9677	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	LOW CONFIDENCE prediction!
4th Layer	1.1.1.295	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	grail3.0005000301	hypothetical protein (265 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	gw1.4242.1.1	hypothetical protein (171 aa)			•						0.482
	eugene3.00081696	hypothetical protein (214 aa)			•						0.464

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	264
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	9e-90
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	3e-68
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-67
cd05233	234	cd05233, SDR_c, classical (c) SDRs	2e-59
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-58
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-57
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	2e-57
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	6e-54
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-52
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	3e-51
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	1e-50
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	6e-50
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	7e-50
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	1e-49
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	3e-49
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	8e-48
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	1e-47
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-47
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-46
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	2e-46
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	3e-46
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	5e-46
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	5e-46
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	4e-45
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	4e-45
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	4e-45
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	6e-43
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-43
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	2e-42
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	2e-42
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	1e-41
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	2e-41
PRK08265	261	PRK08265, PRK08265, short chain dehydrogenase; Pro	2e-41
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	2e-41
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	5e-41
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	3e-40
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	3e-40
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	8e-40
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	4e-39
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	5e-39
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	6e-39
PRK06500	249	PRK06500, PRK06500, short chain dehydrogenase; Pro	1e-38
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	1e-38
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	1e-38
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	2e-38
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	8e-38
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	8e-38
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	1e-37
PRK06701	290	PRK06701, PRK06701, short chain dehydrogenase; Pro	1e-37
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	3e-37
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	5e-37
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	7e-37
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	1e-36
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	2e-36
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	5e-36
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	5e-36
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	5e-36
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	5e-36
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-35
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	2e-35
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-35
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	1e-34
cd05359	242	cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_c	6e-34
cd05344	253	cd05344, BKR_like_SDR_like, putative beta-ketoacyl	8e-34
PRK06198	260	PRK06198, PRK06198, short chain dehydrogenase; Pro	1e-33
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-33
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	4e-33
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	8e-33
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-33
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	1e-32
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	2e-32
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	3e-32
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	4e-32
cd08930	250	cd08930, SDR_c8, classical (c) SDR, subgroup 8	6e-32
PRK13394	262	PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenas	1e-31
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	1e-31
PRK07069	251	PRK07069, PRK07069, short chain dehydrogenase; Val	1e-31
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-31
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	3e-31
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	3e-31
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	3e-31
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	6e-31
PRK06181	263	PRK06181, PRK06181, short chain dehydrogenase; Pro	8e-31
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	1e-30
PRK08063	250	PRK08063, PRK08063, enoyl-(acyl carrier protein) r	2e-30
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-30
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	4e-30
cd09761	242	cd09761, A3DFK9-like_SDR_c, Clostridium thermocell	4e-30
cd05332	257	cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxyste	4e-30
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	7e-30
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	1e-29
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-29
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	1e-29
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	3e-29
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	5e-29
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	2e-28
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	2e-28
cd08935	271	cd08935, mannonate_red_SDR_c, putative D-mannonate	3e-28
PRK07814	263	PRK07814, PRK07814, short chain dehydrogenase; Pro	4e-28
PRK08643	256	PRK08643, PRK08643, acetoin reductase; Validated	6e-28
TIGR04316	250	TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxyben	2e-27
cd05351	244	cd05351, XR_like_SDR_c, xylulose reductase-like, c	2e-27
cd08940	258	cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydroge	2e-27
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	2e-27
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	2e-27
TIGR03206	250	TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxy	3e-27
cd08934	243	cd08934, CAD_SDR_c, clavulanic acid dehydrogenase	4e-27
PRK08220	252	PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehy	8e-27
PRK05875	276	PRK05875, PRK05875, short chain dehydrogenase; Pro	1e-26
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	1e-26
PRK06077	252	PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-26
cd05337	255	cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl	8e-26
PRK08628	258	PRK08628, PRK08628, short chain dehydrogenase; Pro	8e-26
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	1e-25
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	2e-25
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	3e-25
PRK09135	249	PRK09135, PRK09135, pteridine reductase; Provision	3e-25
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	4e-25
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	4e-25
PRK08642	253	PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein)	4e-25
PRK07856	252	PRK07856, PRK07856, short chain dehydrogenase; Pro	5e-25
PRK07523	255	PRK07523, PRK07523, gluconate 5-dehydrogenase; Pro	9e-25
PRK05717	255	PRK05717, PRK05717, oxidoreductase; Validated	1e-24
PRK06128	300	PRK06128, PRK06128, oxidoreductase; Provisional	1e-24
PRK08261	450	PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-24
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	3e-24
PRK07666	239	PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-24
PRK12745	256	PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-prote	4e-24
TIGR03325	262	TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-	5e-24
COG0300	265	COG0300, DltE, Short-chain dehydrogenases of vario	7e-24
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	7e-24
cd08932	223	cd08932, HetN_like_SDR_c, HetN oxidoreductase-like	9e-24
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	2e-23
PRK09730	247	PRK09730, PRK09730, putative NAD(P)-binding oxidor	2e-23
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	3e-23
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	6e-23
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	8e-23
PRK07074	257	PRK07074, PRK07074, short chain dehydrogenase; Pro	9e-23
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	1e-22
PRK12742	237	PRK12742, PRK12742, oxidoreductase; Provisional	1e-22
PRK12824	245	PRK12824, PRK12824, acetoacetyl-CoA reductase; Pro	1e-22
cd05357	234	cd05357, PR_SDR_c, pteridine reductase (PR), class	2e-22
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	2e-22
cd05350	239	cd05350, SDR_c6, classical (c) SDR, subgroup 6	2e-22
PRK07024	257	PRK07024, PRK07024, short chain dehydrogenase; Pro	3e-22
PRK06949	258	PRK06949, PRK06949, short chain dehydrogenase; Pro	4e-22
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	6e-22
PRK08277	278	PRK08277, PRK08277, D-mannonate oxidoreductase; Pr	7e-22
cd05331	244	cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydroz	9e-22
cd05343	250	cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, c	1e-21
cd08942	250	cd08942, RhlG_SDR_c, RhlG and related beta-ketoacy	1e-21
PRK07985	294	PRK07985, PRK07985, oxidoreductase; Provisional	2e-21
pfam00106	167	pfam00106, adh_short, short chain dehydrogenase	4e-21
pfam13561	239	pfam13561, adh_short_C2, Enoyl-(Acyl carrier prote	4e-21
PRK07792	306	PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-21
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-20
PRK07791	286	PRK07791, PRK07791, short chain dehydrogenase; Pro	4e-20
cd08945	258	cd08945, PKR_SDR_c, Polyketide ketoreductase, clas	6e-20
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-19
cd08937	256	cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa	5e-19
TIGR01829	242	TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reducta	5e-19
cd05360	233	cd05360, SDR_c3, classical (c) SDR, subgroup 3	7e-19
cd05328	250	cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid de	9e-19
PRK07577	234	PRK07577, PRK07577, short chain dehydrogenase; Pro	3e-18
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	3e-18
cd09763	265	cd09763, DHRS1-like_SDR_c, human dehydrogenase/red	6e-18
PRK12859	256	PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-prote	6e-18
PRK06523	260	PRK06523, PRK06523, short chain dehydrogenase; Pro	2e-17
cd05346	249	cd05346, SDR_c5, classical (c) SDR, subgroup 5	2e-17
PRK12744	257	PRK12744, PRK12744, short chain dehydrogenase; Pro	3e-17
PRK07832	272	PRK07832, PRK07832, short chain dehydrogenase; Pro	5e-17
PRK12823	260	PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1	5e-17
PRK12936	245	PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-prote	5e-17
PRK08416	260	PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydro	6e-17
PRK12746	254	PRK12746, PRK12746, short chain dehydrogenase; Pro	3e-16
PRK07201	657	PRK07201, PRK07201, short chain dehydrogenase; Pro	3e-16
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	5e-16
PRK05866	293	PRK05866, PRK05866, short chain dehydrogenase; Pro	1e-15
PRK06179	270	PRK06179, PRK06179, short chain dehydrogenase; Pro	1e-15
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	3e-15
PRK09186	256	PRK09186, PRK09186, flagellin modification protein	7e-15
PRK07109	334	PRK07109, PRK07109, short chain dehydrogenase; Pro	7e-15
PRK12748	256	PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-prote	8e-15
PRK06101	240	PRK06101, PRK06101, short chain dehydrogenase; Pro	9e-15
cd05373	238	cd05373, SDR_c10, classical (c) SDR, subgroup 10	9e-15
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-14
cd05327	269	cd05327, retinol-DH_like_SDR_c_like, retinol dehyd	1e-14
PRK06914	280	PRK06914, PRK06914, short chain dehydrogenase; Pro	1e-14
PRK07454	241	PRK07454, PRK07454, short chain dehydrogenase; Pro	2e-14
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-14
cd05370	228	cd05370, SDR_c2, classical (c) SDR, subgroup 2	4e-14
PRK07041	230	PRK07041, PRK07041, short chain dehydrogenase; Pro	7e-14
cd05325	233	cd05325, carb_red_sniffer_like_SDR_c, carbonyl red	1e-13
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	1e-13
PRK06182	273	PRK06182, PRK06182, short chain dehydrogenase; Val	1e-13
PRK08278	273	PRK08278, PRK08278, short chain dehydrogenase; Pro	2e-13
PRK06196	315	PRK06196, PRK06196, oxidoreductase; Provisional	2e-13
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	2e-13
cd08953	436	cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup	3e-13
PRK07576	264	PRK07576, PRK07576, short chain dehydrogenase; Pro	5e-13
PRK05786	238	PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-13
PRK06720	169	PRK06720, PRK06720, hypothetical protein; Provisio	7e-13
PRK07677	252	PRK07677, PRK07677, short chain dehydrogenase; Pro	1e-12
PRK12747	252	PRK12747, PRK12747, short chain dehydrogenase; Pro	3e-12
cd11731	198	cd11731, Lin1944_like_SDR_c, Lin1944 and related p	3e-12
PRK06139	330	PRK06139, PRK06139, short chain dehydrogenase; Pro	5e-12
cd05367	241	cd05367, SPR-like_SDR_c, sepiapterin reductase (SP	5e-12
PRK07370	258	PRK07370, PRK07370, enoyl-(acyl carrier protein) r	9e-12
PRK06180	277	PRK06180, PRK06180, short chain dehydrogenase; Pro	2e-11
TIGR01831	239	TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-prote	3e-11
cd09762	243	cd09762, HSDL2_SDR_c, human hydroxysteroid dehydro	3e-11
PRK06125	259	PRK06125, PRK06125, short chain dehydrogenase; Pro	5e-11
PRK12938	246	PRK12938, PRK12938, acetyacetyl-CoA reductase; Pro	5e-11
PRK09291	257	PRK09291, PRK09291, short chain dehydrogenase; Pro	7e-11
cd05334	221	cd05334, DHPR_SDR_c_like, dihydropteridine reducta	9e-11
cd05354	235	cd05354, SDR_c7, classical (c) SDR, subgroup 7	2e-10
PRK08263	275	PRK08263, PRK08263, short chain dehydrogenase; Pro	3e-10
pfam08659	181	pfam08659, KR, KR domain	3e-10
PRK08594	257	PRK08594, PRK08594, enoyl-(acyl carrier protein) r	5e-10
PRK12428	241	PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydro	1e-09
PRK05693	274	PRK05693, PRK05693, short chain dehydrogenase; Pro	2e-09
PRK08264	238	PRK08264, PRK08264, short chain dehydrogenase; Val	4e-09
cd09810	311	cd09810, LPOR_like_SDR_c_like, light-dependent pro	6e-09
PRK08159	272	PRK08159, PRK08159, enoyl-(acyl carrier protein) r	7e-09
PRK06940	275	PRK06940, PRK06940, short chain dehydrogenase; Pro	7e-09
cd05356	239	cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxyst	9e-09
PRK09134	258	PRK09134, PRK09134, short chain dehydrogenase; Pro	1e-08
PRK09072	263	PRK09072, PRK09072, short chain dehydrogenase; Pro	1e-08
PRK07775	274	PRK07775, PRK07775, short chain dehydrogenase; Pro	2e-08
PRK05993	277	PRK05993, PRK05993, short chain dehydrogenase; Pro	2e-08
smart00822	180	smart00822, PKS_KR, This enzymatic domain is part	3e-08
PRK06197	306	PRK06197, PRK06197, short chain dehydrogenase; Pro	5e-08
COG3967	245	COG3967, DltE, Short-chain dehydrogenase involved	6e-08
cd05274	375	cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatt	9e-08
PRK07806	248	PRK07806, PRK07806, short chain dehydrogenase; Pro	1e-07
PRK08339	263	PRK08339, PRK08339, short chain dehydrogenase; Pro	2e-07
PRK08415	274	PRK08415, PRK08415, enoyl-(acyl carrier protein) r	4e-07
cd05361	242	cd05361, haloalcohol_DH_SDR_c-like, haloalcohol de	5e-07
cd09807	274	cd09807, retinol-DH_like_SDR_c, retinol dehydrogen	9e-07
cd09806	258	cd09806, type1_17beta-HSD-like_SDR_c, human estrog	9e-07
PRK10538	248	PRK10538, PRK10538, malonic semialdehyde reductase	3e-06
cd09809	284	cd09809, human_WWOX_like_SDR_c-like, human WWOX (W	4e-06
PRK07533	258	PRK07533, PRK07533, enoyl-(acyl carrier protein) r	9e-06
PRK07102	243	PRK07102, PRK07102, short chain dehydrogenase; Pro	1e-05
PRK06953	222	PRK06953, PRK06953, short chain dehydrogenase; Pro	2e-05
cd08951	260	cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13	6e-05
PRK06482	276	PRK06482, PRK06482, short chain dehydrogenase; Pro	6e-05
cd09805	281	cd09805, type2_17beta_HSD-like_SDR_c, human 17beta	6e-05
PRK06483	236	PRK06483, PRK06483, dihydromonapterin reductase; P	7e-05
PRK08340	259	PRK08340, PRK08340, glucose-1-dehydrogenase; Provi	7e-05
cd11730	206	cd11730, Tthb094_like_SDR_c, Tthb094 and related p	9e-05
PRK06505	271	PRK06505, PRK06505, enoyl-(acyl carrier protein) r	1e-04
PRK06924	251	PRK06924, PRK06924, short chain dehydrogenase; Pro	1e-04
PRK06603	260	PRK06603, PRK06603, enoyl-(acyl carrier protein) r	2e-04
PLN00015	308	PLN00015, PLN00015, protochlorophyllide reductase	3e-04
cd02266	186	cd02266, SDR, Short-chain dehydrogenases/reductase	4e-04
PRK08251	248	PRK08251, PRK08251, short chain dehydrogenase; Pro	0.002
cd08941	290	cd08941, 3KS_SDR_c, 3-keto steroid reductase, clas	0.002
cd09808	255	cd09808, DHRS-12_like_SDR_c-like, human dehydrogen	0.002
TIGR01289	314	TIGR01289, LPOR, light-dependent protochlorophylli	0.002
cd08955	376	cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (	0.002
PRK08703	239	PRK08703, PRK08703, short chain dehydrogenase; Pro	0.003
PRK08690	261	PRK08690, PRK08690, enoyl-(acyl carrier protein) r	0.003

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  265 bits (680), Expect = 9e-90
 Identities = 132/250 (52%), Positives = 170/250 (68%), Gaps = 2/250 (0%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GKVAIITGGASGIGE TARLFA HGAR +VIADI D+ G+ VA  +G     +VHCD
Sbjct: 1   RLDGKVAIITGGASGIGEATARLFAKHGAR-VVIADIDDDAGQAVAAELGDPDISFVHCD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT E  V+A VD+ V  +G+LDIMF+NAG+L +   ++L+     F+R+  +NV G    
Sbjct: 60  VTVEADVRAAVDTAVARFGRLDIMFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLG 119

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            KHAARVM+    +GSIV  ASVAG  GG     Y  SKHAV+GL RSA+ +LG HGIRV
Sbjct: 120 TKHAARVMIPAK-KGSIVSVASVAGVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRV 178

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           NCVSP+G+ATPL    +G+  + +E+       L+G  LR   +A AVL+LA  DS +V+
Sbjct: 179 NCVSPYGVATPLLTAGFGVEDEAIEEAVRGAANLKGTALRPEDIAAAVLYLASDDSRYVS 238

Query: 252 GHDLVVDGGF 261
           G +LVVDGG 
Sbjct: 239 GQNLVVDGGL 248

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  212 bits (541), Expect = 3e-68
 Identities = 114/259 (44%), Positives = 161/259 (62%), Gaps = 13/259 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHC 70
           +L GKVA++TGGA+GIGE+  RLF  HGA+ + I D+QD+LG+ V  S+G      + HC
Sbjct: 15  RLLGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGQNVCDSLGGEPNVCFFHC 73

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V   VD TV  +G LDIM +NAG+       + +++ S F+++F +NV+G+  
Sbjct: 74  DVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFL 133

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +KHAAR+M+    +GSIV   SVA + GG     Y  SKHAV+GL RS + +LG HGIR
Sbjct: 134 GMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIR 192

Query: 191 VNCVSPHGLATPLTCHAYGMPADE--------VEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           VNCVSP+ + T L   A+ +P DE                  L+GV L    VA+AVLFL
Sbjct: 193 VNCVSPYAVPTALAL-AH-LPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL 250

Query: 243 ACRDSEFVTGHDLVVDGGF 261
           A  ++ +++G +L++DGGF
Sbjct: 251 ASDEARYISGLNLMIDGGF 269

Length = 280

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  207 bits (530), Expect = 6e-67
 Identities = 100/256 (39%), Positives = 141/256 (55%), Gaps = 11/256 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCD 71
           LEGKVAI+TG +SGIGE  AR FA  GAR +V+ D  +E   +VA  I   G+   V  D
Sbjct: 3   LEGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAAD 61

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V++E  V+A V + ++ +G +DI+ +NAG  +  +  +LD+D + FDR+FA+NV+     
Sbjct: 62  VSDEADVEAAVAAALERFGSVDILVNNAGT-THRNGPLLDVDEAEFDRIFAVNVKSPYLW 120

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + A   M   G  G+IV  AS AG         Y+ SK AVI L ++ + +LG   IRV
Sbjct: 121 TQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRV 179

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSE 248
           N V+P  + T L     G P  E    F    PL     R G    +A+A LFLA  ++ 
Sbjct: 180 NAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLG----RLGTPEDIANAALFLASDEAS 235

Query: 249 FVTGHDLVVDGGFLIR 264
           ++TG  LVVDGG  + 
Sbjct: 236 WITGVTLVVDGGRCVG 251

Length = 251

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score =  188 bits (479), Expect = 2e-59
 Identities = 84/242 (34%), Positives = 132/242 (54%), Gaps = 9/242 (3%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTNEC 76
           A++TG +SGIG   AR  A  GA+ +V+AD  +E   ++A    +G     V  DV++E 
Sbjct: 1   ALVTGASSGIGRAIARRLAREGAK-VVLADRNEEALAELAAIEALGGNAVAVQADVSDEE 59

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
            V+ALV+  ++ +G+LDI+ +NAGI       + +L    +DR+  +N+ G+    + A 
Sbjct: 60  DVEALVEEALEEFGRLDILVNNAGIARPGP--LEELTDEDWDRVLDVNLTGVFLLTRAAL 117

Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
             M + G  G IV  +SVAG      +  Y  SK A+ GL RS +++L  +GIRVN V+P
Sbjct: 118 PHMKKQG-GGRIVNISSVAGLRPLPGQAAYAASKAALEGLTRSLALELAPYGIRVNAVAP 176

Query: 197 HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV 256
             + TP+         +E EK      PL G +     VA+AV+FLA  ++ ++TG  + 
Sbjct: 177 GLVDTPMLAKLGP---EEAEKELAAAIPL-GRLGTPEEVAEAVVFLASDEASYITGQVIP 232

Query: 257 VD 258
           VD
Sbjct: 233 VD 234

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  186 bits (475), Expect = 1e-58
 Identities = 84/254 (33%), Positives = 135/254 (53%), Gaps = 10/254 (3%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVH 69
           KL GKVAI+TG + GIG   A L A  GA++++  DI +E  +++   I    G    V 
Sbjct: 2   KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVK 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV++E  V+ LV+  V+ +G++DI+ +NAGI  S+   V D+    +DR+  +N+ G+ 
Sbjct: 62  ADVSSEEDVENLVEQIVEKFGKIDILVNNAGI--SNFGLVTDMTDEEWDRVIDVNLTGVM 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              ++A   M++    G IV  +S+ G  G      Y  SK AV    ++ + +L   GI
Sbjct: 120 LLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGI 178

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RVN V+P  + T +         ++ E L   + PL G + +   +A  VLFLA  D+ +
Sbjct: 179 RVNAVAPGAIDTEM---WSSFSEEDKEGL-AEEIPL-GRLGKPEEIAKVVLFLASDDASY 233

Query: 250 VTGHDLVVDGGFLI 263
           +TG  + VDGG+  
Sbjct: 234 ITGQIITVDGGWTC 247

Length = 247

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  184 bits (469), Expect = 1e-57
 Identities = 82/254 (32%), Positives = 134/254 (52%), Gaps = 17/254 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            L+GK A++TG + GIG   A   A  GA+ +VI D  +E    +A  +    G+   + 
Sbjct: 2   SLQGKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLV 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV++E  V+AL+++ V+ +G LDI+ +NAGI  + D  +  +    +DR+  +N+ G  
Sbjct: 61  FDVSDEAAVRALIEAAVEAFGALDILVNNAGI--TRDALLPRMSEEDWDRVIDVNLTGTF 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             V+ A   M++    G IV  +SV+G  G   +T+Y  +K  VIG  ++ +++L   GI
Sbjct: 119 NVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGI 177

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
            VN V+P  + T +T         E+ K    + PL     R G    VA+AV FLA   
Sbjct: 178 TVNAVAPGFIDTDMTEGLPEEVKAEILK----EIPLG----RLGQPEEVANAVAFLASDA 229

Query: 247 SEFVTGHDLVVDGG 260
           + ++TG  + V+GG
Sbjct: 230 ASYITGQVIPVNGG 243

Length = 246

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score =  183 bits (466), Expect = 2e-57
 Identities = 88/257 (34%), Positives = 135/257 (52%), Gaps = 13/257 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG----RQVATSIGVGKCHY 67
            L GKVA++TG +SGIG   AR  A  GAR++V A   +E             G G+   
Sbjct: 2   DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAA 61

Query: 68  VHCDVTN-ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
           V  DV++ E  V+ALV +  + +G++DI+ +NAGI    D  + +L    +DR+  +N+ 
Sbjct: 62  VAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGP-DAPLEELTEEDWDRVIDVNLL 120

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           G     + A  +M +      IV  +SVAG  G   +  Y  SK A+IGL ++ +++L  
Sbjct: 121 GAFLLTRAALPLMKKQ----RIVNISSVAGLGGPPGQAAYAASKAALIGLTKALALELAP 176

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            GIRVN V+P  + TP+T        + +++    + PL G +     VA AV FLA  +
Sbjct: 177 RGIRVNAVAPGYIDTPMTAALESAELEALKR-LAARIPL-GRLGTPEEVAAAVAFLASDE 234

Query: 247 -SEFVTGHDLVVDGGFL 262
            + ++TG  L VDGG L
Sbjct: 235 AASYITGQTLPVDGGLL 251

Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score =  174 bits (443), Expect = 6e-54
 Identities = 98/254 (38%), Positives = 143/254 (56%), Gaps = 11/254 (4%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N+L+GKVAI+TGGA G+G   ARL    GA+ +V++DI DE G+  A  +G     + H 
Sbjct: 1   NRLKGKVAIVTGGARGLGLAHARLLVAEGAK-VVLSDILDEEGQAAAAELG-DAARFFHL 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+E    A+VD+  + +G+LD++ +NAGIL+    TV       + RL  IN+ G+  
Sbjct: 59  DVTDEDGWTAVVDTAREAFGRLDVLVNNAGILTG--GTVETTTLEEWRRLLDINLTGVFL 116

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG--VHG 188
             +     M E G  GSI+  +S+ G  G      Y+ SK AV GL +SA+++     +G
Sbjct: 117 GTRAVIPPMKEAG-GGSIINMSSIEGLVGDPALAAYNASKGAVRGLTKSAALECATQGYG 175

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN V P  + TP+T     +   + E    P TP+ G       +A AV++LA  +S 
Sbjct: 176 IRVNSVHPGYIYTPMT---DELLIAQGEMGNYPNTPM-GRAGEPDEIAYAVVYLASDESS 231

Query: 249 FVTGHDLVVDGGFL 262
           FVTG +LVVDGG+ 
Sbjct: 232 FVTGSELVVDGGYT 245

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score =  169 bits (431), Expect = 4e-52
 Identities = 100/255 (39%), Positives = 143/255 (56%), Gaps = 15/255 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
             GKVA++TGGA+GIG  TA  FA  GA+ +V+AD     G +    I    G+  +V C
Sbjct: 5   FSGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAGGEETVALIREAGGEALFVAC 63

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGIL----SSSDQTVLDLDFSAFDRLFAINVR 126
           DVT + +VKALV+ T+  YG+LD  F+NAGI       ++ +  +     FD +  +NV+
Sbjct: 64  DVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAE-----FDAIMGVNVK 118

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           G+  C+K+   +M+  G  G+IV TASVAG     + + Y  SKHAVIGL +SA+++   
Sbjct: 119 GVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAK 177

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            GIRVN V P  + T +   AY     + E       P+ G + +   VA AVL+L    
Sbjct: 178 KGIRVNAVCPAVIDTDMFRRAYEADPRKAEFA-AAMHPV-GRIGKVEEVASAVLYLCSDG 235

Query: 247 SEFVTGHDLVVDGGF 261
           + F TGH L+VDGG 
Sbjct: 236 ASFTTGHALMVDGGA 250

Length = 253

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score =  167 bits (426), Expect = 3e-51
 Identities = 95/252 (37%), Positives = 130/252 (51%), Gaps = 10/252 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L G+VA+ITGG SGIG  TAR  A  GA  +V+ DI  E G+  A  +G     +V  
Sbjct: 3   QRLAGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEAGKAAADEVGG---LFVPT 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+E  V AL D+  + YG +DI F+NAGI    D ++L+    A+ R+  +N+  +  
Sbjct: 59  DVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYL 118

Query: 131 CVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
           C K A   MV  G +GSI+ TAS VA       +  Y  SK  V+ + R   VQ    GI
Sbjct: 119 CCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGI 177

Query: 190 RVNCVSPHGLATPLTCHAYGM-PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           RVN + P  + TPL    +   P     +L     P+ G       +A AV FLA  D+ 
Sbjct: 178 RVNALCPGPVNTPLLQELFAKDPERAARRLV--HVPM-GRFAEPEEIAAAVAFLASDDAS 234

Query: 249 FVTGHDLVVDGG 260
           F+T    +VDGG
Sbjct: 235 FITASTFLVDGG 246

Length = 255

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score =  165 bits (420), Expect = 1e-50
 Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 10/252 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC-- 70
           LEGKVAI+TG  +GIG   A   A  GAR +V+ADI     + V   I       +    
Sbjct: 1   LEGKVAIVTGAGAGIGAACAARLAREGAR-VVVADIDGGAAQAVVAQIA---GGALALRV 56

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+E QV AL +  V+ +G LD++ +NAG +  +   ++D D + +D+  AIN+RG   
Sbjct: 57  DVTDEQQVAALFERAVEEFGGLDLLVNNAGAMHLT-PAIIDTDLAVWDQTMAINLRGTFL 115

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C +HAA  M+  G  GSIV  +S+AG  G      Y  SK A+  L R+ + +L   GIR
Sbjct: 116 CCRHAAPRMIARG-GGSIVNLSSIAGQSGDPGYGAYGASKAAIRNLTRTLAAELRHAGIR 174

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT--PLEGVVLRAGHVADAVLFLACRDSE 248
            N ++P  + TPL           +           L+G + R   VA AV+FL   D+ 
Sbjct: 175 CNALAPGLIDTPLLLAKLAGFEGALGPGGFHLLIHQLQGRLGRPEDVAAAVVFLLSDDAS 234

Query: 249 FVTGHDLVVDGG 260
           F+TG  L VDGG
Sbjct: 235 FITGQVLCVDGG 246

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score =  164 bits (416), Expect = 6e-50
 Identities = 97/253 (38%), Positives = 138/253 (54%), Gaps = 5/253 (1%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +LEGKVAI+TG  SG GE  AR FA  GAR +VIADI  +   +VA  IG      +  
Sbjct: 1   MRLEGKVAIVTGAGSGFGEGIARRFAQEGAR-VVIADINADGAERVAADIG-EAAIAIQA 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT    V+A+V++ +  +G+LDI+ +NAGI +  ++ +L++D   FDR+FA+NV+ +  
Sbjct: 59  DVTKRADVEAMVEAALSKFGRLDILVNNAGI-THRNKPMLEVDEEEFDRVFAVNVKSIYL 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +     M E G  G I+  AS AG       T Y+ SK  V+   ++ +V+L    IR
Sbjct: 118 SAQALVPHMEEQG-GGVIINIASTAGLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIR 176

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VNC+ P    TPL     G    E    F    PL G +     +A+A L+LA  ++ F+
Sbjct: 177 VNCLCPVAGETPLLSMFMGEDTPENRAKFRATIPL-GRLSTPDDIANAALYLASDEASFI 235

Query: 251 TGHDLVVDGGFLI 263
           TG  L VDGG  I
Sbjct: 236 TGVALEVDGGRCI 248

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score =  164 bits (417), Expect = 7e-50
 Identities = 88/256 (34%), Positives = 142/256 (55%), Gaps = 10/256 (3%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQV-ATSIGVGKCHYVHC 70
           +LE KVA+ITG ++GIG+ +A   A  GA  ++  DI + +   V       GK    H 
Sbjct: 3   RLENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIAEAVSETVDKIKSNGGKAKAYHV 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+++E QVK       + +G++D++F+NAG+ +++ + + +     FD++ A+++RG   
Sbjct: 62  DISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAAGR-IHEYPVDVFDKIMAVDMRGTFL 120

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K    +M+E G  GSI+ T+S +G      R+ Y+ +K AVI   +S +++ G  GIR
Sbjct: 121 MTKMLLPLMMEQG--GSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIR 178

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLF-EPQ---TPLEGVVLRAGHVADAVLFLACRD 246
            N ++P  + TPL     G   DE  K F E Q   TPL G + +   VA  V+FLA  D
Sbjct: 179 ANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL-GRLGKPEEVAKLVVFLASDD 237

Query: 247 SEFVTGHDLVVDGGFL 262
           S F+TG  + +DGG +
Sbjct: 238 SSFITGETIRIDGGVM 253

Length = 272

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score =  163 bits (415), Expect = 1e-49
 Identities = 93/256 (36%), Positives = 136/256 (53%), Gaps = 12/256 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GKVA++TG ASGIGE  A  +   GAR +VIADI+    R  A  IG      V  D
Sbjct: 3   RLQGKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPARARLAALEIGPAAI-AVSLD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT +  +  +V + V+ +G +DI+F+NA +       +LD+   ++DRLFA+NV+G+   
Sbjct: 61  VTRQDSIDRIVAAAVERFGGIDILFNNAALFDM--APILDISRDSYDRLFAVNVKGLFFL 118

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++  AR MVE G  G I+  AS AG  G    + Y  +K AVI   +SA++ L  HGI V
Sbjct: 119 MQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINV 178

Query: 192 NCVSPHGLATP-------LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           N ++P  + TP       L       P  E ++L     PL G +     +    LFLA 
Sbjct: 179 NAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPL-GRMGVPDDLTGMALFLAS 237

Query: 245 RDSEFVTGHDLVVDGG 260
            D++++      VDGG
Sbjct: 238 ADADYIVAQTYNVDGG 253

Length = 257

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  162 bits (412), Expect = 3e-49
 Identities = 89/261 (34%), Positives = 131/261 (50%), Gaps = 15/261 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVG-KCHYVH 69
            L+GKVA++TG ASGIG   A   A  GA+ +VIAD+ DE     A ++   G K   V 
Sbjct: 1   MLKGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGVA 59

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVT+E  + A +D  V+ +G +DI+ +NAGI   +   + D     + ++ AI + G  
Sbjct: 60  MDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHVAP--IEDFPTEKWKKMIAIMLDGAF 117

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              K A  +M   G  G I+  ASV G  G   +  Y  +KH +IGL +  +++   HG+
Sbjct: 118 LTTKAALPIMKAQGG-GRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGV 176

Query: 190 RVNCVSPHGLATPLT-------CHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVADAVLF 241
            VN + P  + TPL            G+  +EV E +  P  P +        +AD  LF
Sbjct: 177 TVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVP-QKRFTTVEEIADYALF 235

Query: 242 LACRDSEFVTGHDLVVDGGFL 262
           LA   ++ VTG   VVDGG+ 
Sbjct: 236 LASFAAKGVTGQAWVVDGGWT 256

Length = 258

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score =  158 bits (402), Expect = 8e-48
 Identities = 84/257 (32%), Positives = 144/257 (56%), Gaps = 14/257 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADI---QDELGRQVATSIGVGKCHYV 68
            L+GKVAI+TGG+ GIG   AR  A+ GA + +I +     +E   ++A   GV K    
Sbjct: 5   SLKGKVAIVTGGSRGIGLAIARALAEAGADVAIIYNSAPRAEEKAEELAKKYGV-KTKAY 63

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDV+++  V+       +++G++DI+ +NAGI  +  +  LD  +  ++++  +N+ G+
Sbjct: 64  KCDVSSQESVEKTFKQIQKDFGKIDILIANAGI--TVHKPALDYTYEQWNKVIDVNLNGV 121

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD--YHMSKHAVIGLVRSASVQLGV 186
             C + AA++  + G +GS++ TAS++G+   + +    Y+ SK AVI L +S +V+   
Sbjct: 122 FNCAQAAAKIFKKQG-KGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAK 180

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
           + IRVN +SP  + T LT         E+ K +E   PL+ + L    +  A L+LA   
Sbjct: 181 YFIRVNSISPGYIDTDLTDFVDK----ELRKKWESYIPLKRIAL-PEELVGAYLYLASDA 235

Query: 247 SEFVTGHDLVVDGGFLI 263
           S + TG DL++DGG+  
Sbjct: 236 SSYTTGSDLIIDGGYTC 252

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score =  158 bits (402), Expect = 1e-47
 Identities = 80/257 (31%), Positives = 125/257 (48%), Gaps = 19/257 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHC 70
           LEG+VA++TG A GIG   A   A  GA  +++ DI  +     A  +    GK      
Sbjct: 4   LEGRVALVTGAARGIGRAIAVRLAADGAE-VIVVDICGDDAAATAELVEAAGGKARARQV 62

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +   +KA V + V+++G+LDI+ +NAGI         ++D   ++R+  +N+ G   
Sbjct: 63  DVRDRAALKAAVAAGVEDFGRLDILVANAGI--FPLTPFAEMDDEQWERVIDVNLTGTFL 120

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGVHGI 189
             + A   ++  G  G IV T+SVAG   G      Y  SK  ++G  R+ +++L    I
Sbjct: 121 LTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNI 179

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV-VLRAG---HVADAVLFLACR 245
            VN V P G+ TP+        A  +      +     + + R G    +A AVLFLA  
Sbjct: 180 TVNSVHPGGVDTPM--------AGNLGDAQWAEAIAAAIPLGRLGEPEDIAAAVLFLASD 231

Query: 246 DSEFVTGHDLVVDGGFL 262
           ++ ++TG  L VDGG  
Sbjct: 232 EARYITGQTLPVDGGAT 248

Length = 251

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score =  158 bits (401), Expect = 2e-47
 Identities = 82/260 (31%), Positives = 128/260 (49%), Gaps = 20/260 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            LEGKVA++TG + GIG   A   A  GA +++     +     +   IG   GK   V 
Sbjct: 2   SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQ 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV++   V+  VD     +G +DI+ +NAGI    D  ++ +    +DR+   N+ G+ 
Sbjct: 62  GDVSDAESVERAVDEAKAEFGGVDILVNNAGITR--DNLLMRMKEEDWDRVIDTNLTGVF 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              K  AR M++    G I+  +SV G  G   + +Y  SK  VIG  +S + +L   GI
Sbjct: 120 NLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGI 178

Query: 190 RVNCVSPHGLATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
            VN V+P  + T +T       A  ++V++    Q PL     R G    +A AV FLA 
Sbjct: 179 TVNAVAPGFIETDMT------DALPEDVKEAILAQIPLG----RLGQPEEIASAVAFLAS 228

Query: 245 RDSEFVTGHDLVVDGGFLIR 264
            ++ ++TG  L V+GG ++ 
Sbjct: 229 DEAAYITGQTLHVNGGMVMG 248

Length = 248

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score =  165 bits (419), Expect = 1e-46
 Identities = 91/259 (35%), Positives = 131/259 (50%), Gaps = 15/259 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCD 71
           L GKVA++TG A GIG+ TA+  A  GA  +V+AD+ +E     A  +G   +   V CD
Sbjct: 420 LAGKVALVTGAAGGIGKATAKRLAAEGAC-VVLADLDEEAAEAAAAELGGPDRALGVACD 478

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+E  V+A  +     +G +DI+ SNAGI  S    + +     + R F +N  G    
Sbjct: 479 VTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGP--IEETSDEDWRRSFDVNATGHFLV 536

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + A R+M   G+ GSIV  AS      G     Y  +K A + LVR  +++LG  GIRV
Sbjct: 537 AREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRV 596

Query: 192 NCVSPH------GLATPL----TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           N V+P       G+ T         AYG+  +E+E+ +  +  L+  V     VA+AV+F
Sbjct: 597 NGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLLKREVT-PEDVAEAVVF 655

Query: 242 LACRDSEFVTGHDLVVDGG 260
           LA       TG  + VDGG
Sbjct: 656 LASGLLSKTTGAIITVDGG 674

Length = 681

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score =  154 bits (392), Expect = 2e-46
 Identities = 76/247 (30%), Positives = 125/247 (50%), Gaps = 11/247 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           KVA++TG + GIG   A   A  GA+ + + D  +E   +    I    G    +  DV+
Sbjct: 1   KVALVTGASRGIGRAIALRLAAEGAK-VAVTDRSEEAAAETVEEIKALGGNAAALEADVS 59

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +   V+ALV+     +G +DI+ +NAGI  + D  ++ +    +D +  +N+ G+    +
Sbjct: 60  DREAVEALVEKVEAEFGPVDILVNNAGI--TRDNLLMRMSEEDWDAVINVNLTGVFNVTQ 117

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
              R M++    G I+  +SV G  G   + +Y  SK  VIG  +S + +L   GI VN 
Sbjct: 118 AVIRAMIKRR-SGRIINISSVVGLIGNPGQANYAASKAGVIGFTKSLAKELASRGITVNA 176

Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH 253
           V+P  + T +T        ++V++    Q PL G +     VA+AV FLA  D+ ++TG 
Sbjct: 177 VAPGFIDTDMT----DALPEKVKEKILKQIPL-GRLGTPEEVANAVAFLASDDASYITGQ 231

Query: 254 DLVVDGG 260
            L V+GG
Sbjct: 232 VLHVNGG 238

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score =  154 bits (392), Expect = 3e-46
 Identities = 89/259 (34%), Positives = 127/259 (49%), Gaps = 16/259 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
           + L GK A++TG A G+G   A   A+ GA  +   D      R++A ++    G+ H +
Sbjct: 3   SNLAGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAAEARELAAALEAAGGRAHAI 61

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+ +   V+   D+     G LD + +NAGI +S   T  +LD   +D +  +NVRG 
Sbjct: 62  AADLADPASVQRFFDAAAAALGGLDGLVNNAGITNSKSAT--ELDIDTWDAVMNVNVRGT 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              ++ A   + + G RG IV  AS     G  +   Y  SK AVIG+ RS + +LG  G
Sbjct: 120 FLMLRAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRG 178

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACR 245
           I VN ++P   AT  T  AY  PADE    +     LE    R     D   AVLFL   
Sbjct: 179 ITVNAIAPGLTATEAT--AYV-PADERHAYYLKGRALE----RLQVPDDVAGAVLFLLSD 231

Query: 246 DSEFVTGHDLVVDGGFLIR 264
            + FVTG  L V+GGF++ 
Sbjct: 232 AARFVTGQLLPVNGGFVMN 250

Length = 250

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score =  154 bits (390), Expect = 5e-46
 Identities = 98/255 (38%), Positives = 136/255 (53%), Gaps = 8/255 (3%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH-C 70
           +L G+VAI+TG  SGIG  TA+LFA  GAR +V+AD   E   +VA +I  G   +    
Sbjct: 2   RLAGRVAIVTGAGSGIGRATAKLFAREGAR-VVVADRDAEAAERVAAAIAAGGRAFARQG 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +   V+ALVD     +G+LD++ +NAG       TV+  D + +D +  +NV G+  
Sbjct: 61  DVGSAEAVEALVDFVAARWGRLDVLVNNAGF--GCGGTVVTTDEADWDAVMRVNVGGVFL 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K+A  +M   G  GSIV TAS     GG+ R  Y  SK A+  L R+ ++     GIR
Sbjct: 119 WAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIR 177

Query: 191 VNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           VN V+P  + TP     +   AD   + +    + P+      A  VA A LFLA  +S 
Sbjct: 178 VNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM-NRFGTAEEVAQAALFLASDESS 236

Query: 249 FVTGHDLVVDGGFLI 263
           F TG  LVVDGG+L 
Sbjct: 237 FATGTTLVVDGGWLA 251

Length = 252

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score =  154 bits (391), Expect = 5e-46
 Identities = 89/270 (32%), Positives = 137/270 (50%), Gaps = 21/270 (7%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M D+   +    L GKVA++TGGASGIG   A LFA  GAR + + D   E   +VA  +
Sbjct: 1   MTDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDR-SEDVAEVAAQL 58

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFD 118
             G    + CDV++   V+A V + +  +G++DI+ ++AG+  L+ +     D+    +D
Sbjct: 59  LGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALLAPA----EDVSEEDWD 114

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           +   IN++G     +   R M+  G  G IV  AS AG    +R   Y  SK  V+G+ +
Sbjct: 115 KTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVALERHVAYCASKAGVVGMTK 173

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP----QTPLEGVVLRAGH 234
             +++ G +GI VN +SP  + T L   A+     E  K   P      P E        
Sbjct: 174 VLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEE-------- 225

Query: 235 VADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
           +A A LFLA   +  +TG +LV+DGG+ I+
Sbjct: 226 IAAAALFLASDAAAMITGENLVIDGGYTIQ 255

Length = 255

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score =  152 bits (386), Expect = 4e-45
 Identities = 82/256 (32%), Positives = 129/256 (50%), Gaps = 10/256 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+G   ++TGGASGIG   A  FA+ GAR+ V    +  L    A   G  K      DV
Sbjct: 9   LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGA-KVTATVADV 67

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +  QV+ + D+ V+ +G LD++ +NAGI +     + ++    +++  A+N+ G     
Sbjct: 68  ADPAQVERVFDTAVERFGGLDVLVNNAGI-AGPTGGIDEITPEQWEQTLAVNLNGQFYFA 126

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A  ++   G  G I+  +SVAG  G   RT Y  SK AV+GLV+S +++LG  GIRVN
Sbjct: 127 RAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVN 186

Query: 193 CVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            + P  +  P             G+  DE+E+ +  +  L  +V     +A   LFLA  
Sbjct: 187 AILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLGRMV-EPEDIAATALFLASP 245

Query: 246 DSEFVTGHDLVVDGGF 261
            + ++TG  + VDG  
Sbjct: 246 AARYITGQAISVDGNV 261

Length = 264

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score =  152 bits (385), Expect = 4e-45
 Identities = 74/262 (28%), Positives = 122/262 (46%), Gaps = 22/262 (8%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHYVH 69
             +VA++ GG   +G       A+ G R + +ADI  E    VA  I    G G  +   
Sbjct: 1   MNQVAVVIGGGQTLGAFLCHGLAEEGYR-VAVADINSEKAANVAQEINAEYGEGMAYGFG 59

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D T+E  V AL     + +G++D++  NAGI  ++  T  D     FDR   +N+ G  
Sbjct: 60  ADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKAAFIT--DFQLGDFDRSLQVNLVGYF 117

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            C +  +R+M+  G++G I+   S +G  G K  + Y  +K   +GL +S ++ L  +GI
Sbjct: 118 LCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGI 177

Query: 190 RVNCVSPHG-LATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRA---GHVADA 238
            V+ +     L +P+            G+  DEVE+ +  + PL+    R      V + 
Sbjct: 178 TVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLK----RGCDYQDVLNM 233

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           +LF A   + + TG  + V GG
Sbjct: 234 LLFYASPKASYCTGQSINVTGG 255

Length = 259

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score =  152 bits (386), Expect = 4e-45
 Identities = 89/260 (34%), Positives = 130/260 (50%), Gaps = 19/260 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARM-IVIADIQDELGRQVATSI---GVGKCH 66
            KL+GK A+ITGG SGIG   A  FA  GA + I     +++   +    I   G  KC 
Sbjct: 22  GKLKGKKALITGGDSGIGRAVAIAFAREGADVAINYLPEEEDDAEETKKLIEEEGR-KCL 80

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            +  D+ +E   + LV   V+ +G+LDI+ +NA       +++ D+     ++ F  N+ 
Sbjct: 81  LIPGDLGDESFCRDLVKEVVKEFGKLDILVNNAAYQHPQ-ESIEDITTEQLEKTFRTNIF 139

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            M    K A   + +G    SI+ T SV    G     DY  +K A++   R  S+QL  
Sbjct: 140 SMFYLTKAALPHLKKGS---SIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAE 196

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
            GIRVN V+P  + TPL       P ++V + F  Q P+     RAG    VA A +FLA
Sbjct: 197 KGIRVNAVAPGPIWTPLI--PSSFPEEKVSE-FGSQVPMG----RAGQPAEVAPAYVFLA 249

Query: 244 CRDSEFVTGHDLVVDGGFLI 263
            +DS +VTG  L V+GG +I
Sbjct: 250 SQDSSYVTGQVLHVNGGEII 269

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score =  145 bits (369), Expect = 6e-43
 Identities = 75/245 (30%), Positives = 124/245 (50%), Gaps = 10/245 (4%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNE 75
           A++TG + GIG   A   A  GA++I+     +E   +V   +     K   V CDV++ 
Sbjct: 1   ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDR 60

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             VKA+V+   +  G +DI+ +NAGI  + D  ++ +    +D +   N+ G+    +  
Sbjct: 61  EDVKAVVEEIEEELGPIDILVNNAGI--TRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAV 118

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
            R+M++    G I+  +SV G  G   + +Y  SK  VIG  +S + +L    I VN V+
Sbjct: 119 LRIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNAVA 177

Query: 196 PHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL 255
           P  + T +T       +++V+K    Q PL G       VA+AV FLA  ++ ++TG  +
Sbjct: 178 PGFIDTDMT----DKLSEKVKKKILSQIPL-GRFGTPEEVANAVAFLASDEASYITGQVI 232

Query: 256 VVDGG 260
            VDGG
Sbjct: 233 HVDGG 237

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  145 bits (369), Expect = 7e-43
 Identities = 72/250 (28%), Positives = 129/250 (51%), Gaps = 10/250 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L G+VA++TG A G+G   A   A  GA ++V     +E   ++  ++     +   V  
Sbjct: 4   LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQA 63

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT++  ++A V + V+ +G++DI+ +NAGI    D+ + D+    +D +  +N+ G+  
Sbjct: 64  DVTDKAALEAAVAAAVERFGRIDILVNNAGIFE--DKPLADMSDDEWDEVIDVNLSGVFH 121

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++     M +    G IV  +SVAG  G   R++Y  +K  ++GL ++ + +L  +GI 
Sbjct: 122 LLRAVVPPMRKQRG-GRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGIT 180

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V+P  + T +         +E  +  + +TPL G       +A AV FL    S+++
Sbjct: 181 VNMVAPGDIDTDMK----EATIEEAREAKDAETPL-GRSGTPEDIARAVAFLCSDASDYI 235

Query: 251 TGHDLVVDGG 260
           TG  + V GG
Sbjct: 236 TGQVIEVTGG 245

Length = 249

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score =  144 bits (366), Expect = 2e-42
 Identities = 91/258 (35%), Positives = 129/258 (50%), Gaps = 19/258 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIGVG--KCHYV 68
           L GKVAIITG +SGIG  TA LFA  GAR+ +     + L   RQ     GV   K   V
Sbjct: 1   LSGKVAIITGSSSGIGAGTAILFARLGARLALTGRDAERLEETRQSCLQAGVSEKKILLV 60

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+T E     ++ +T+  +G+LDI+ +NAGIL+       D D   +D++  +N+R +
Sbjct: 61  VADLTEEEGQDRIISTTLAKFGRLDILVNNAGILAKG--GGEDQDIEEYDKVMNLNLRAV 118

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD----YHMSKHAVIGLVRSASVQL 184
               K A   +++   +G IV  +SVA    G R       Y +SK A+    R  +++L
Sbjct: 119 IYLTKLAVPHLIK--TKGEIVNVSSVA----GGRSFPGVLYYCISKAALDQFTRCTALEL 172

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFL 242
              G+RVN VSP  + T       GMP ++  K      +T   G       VA+A+ FL
Sbjct: 173 APKGVRVNSVSPGVIVTGFH-RRMGMPEEQYIKFLSRAKETHPLGRPGTVDEVAEAIAFL 231

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   S F+TG  L VDGG
Sbjct: 232 ASDASSFITGQLLPVDGG 249

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score =  152 bits (386), Expect = 2e-42
 Identities = 94/262 (35%), Positives = 128/262 (48%), Gaps = 18/262 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHYV 68
           L  +VA +TGGA GIG  TAR  A  GA  +V+AD+  E    VA  I    G G+   +
Sbjct: 412 LARRVAFVTGGAGGIGRETARRLAAEGAH-VVLADLNLEAAEAVAAEINGQFGAGRAVAL 470

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DVT+E  VKA        YG +DI+ +NAGI +SS     +     +     I   G 
Sbjct: 471 KMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATSSP--FEETTLQEWQLNLDILATGY 528

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               + A R M E G+ G+IV  AS      GK  + Y  +K A   L R  + + G +G
Sbjct: 529 FLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYG 588

Query: 189 IRVNCVSPHGLAT----------PLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA 238
           IRVN V+P  +                 AYG+PADE+E+ +  +T L+  +  A  +A+A
Sbjct: 589 IRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLLKRHIFPA-DIAEA 647

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           V FLA   SE  TG  + VDGG
Sbjct: 648 VFFLASSKSEKTTGCIITVDGG 669

Length = 676

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score =  142 bits (361), Expect = 1e-41
 Identities = 91/258 (35%), Positives = 128/258 (49%), Gaps = 19/258 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYV 68
            +L GKVAIITG +SGIG   A+LFA  GA+++V A  Q EL + VA   + G G+   +
Sbjct: 2   MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEG-GEAVAL 60

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV +E   KALV   V+ +G LDI F+NAG L      V ++    +    A N+   
Sbjct: 61  AGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSA 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAG-SCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               KH    M+  G  GS++ T++  G + G      Y  SK  +IGL +  + + G  
Sbjct: 120 FLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQ 178

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV-----VLRAGHVADAVLFL 242
           GIRVN + P G  TP+       P        E    + G+     + +   +A A LFL
Sbjct: 179 GIRVNALLPGGTDTPMGRAMGDTP--------EALAFVAGLHALKRMAQPEEIAQAALFL 230

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   + FVTG  L+VDGG
Sbjct: 231 ASDAASFVTGTALLVDGG 248

Length = 254

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score =  142 bits (360), Expect = 2e-41
 Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 21/258 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L+GKVA++TG + GIG   A   A+ GA +++ +  +++           G +     CD
Sbjct: 3   LKGKVALVTGASRGIGFGIASGLAEAGANIVINSRNEEKAEEAQQLIEKEGVEATAFTCD 62

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINVRGMA 129
           V++E  +KA V++  +++G++DI+ +NAGI+          +F    +  +  +N+ G+ 
Sbjct: 63  VSDEEAIKAAVEAIEEDFGKIDILVNNAGIIRRHPAE----EFPEAEWRDVIDVNLNGVF 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +  AR M++ G  G I+   S+    GG     Y  SK  V GL ++ + +   HGI
Sbjct: 119 FVSQAVARHMIKQG-HGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGI 177

Query: 190 RVNCVSPHGLATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLAC 244
           +VN ++P   AT +T      P   D++ K    + P      R G   D   A +FLA 
Sbjct: 178 QVNAIAPGYFATEMTEAVVADPEFNDDILK----RIPAG----RWGQPEDLVGAAVFLAS 229

Query: 245 RDSEFVTGHDLVVDGGFL 262
             S++V G  + VDGG+L
Sbjct: 230 DASDYVNGQIIFVDGGWL 247

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|236209 PRK08265, PRK08265, short chain dehydrogenase; Provisional

 Score =  142 bits (361), Expect = 2e-41
 Identities = 85/258 (32%), Positives = 119/258 (46%), Gaps = 26/258 (10%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L GKVAI+TGGA+ IG   AR     GAR + I DI  + G  VA S+G     ++  D+
Sbjct: 4   LAGKVAIVTGGATLIGAAVARALVAAGAR-VAIVDIDADNGAAVAASLGER-ARFIATDI 61

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNA------GILSSSDQTVLDLDFSAFDRLFAINVR 126
           T++  ++  V + V  +G++DI+ + A      G+ SS    +  LD         +N+ 
Sbjct: 62  TDDAAIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALD---------VNLV 112

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
             A   + A   +  GG  G+IV   S++       R  Y  SK A+  L RS ++ L  
Sbjct: 113 SAAMLAQAAHPHLARGG--GAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAP 170

Query: 187 HGIRVNCVSPHGLATPLTCHAYG---MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
            GIRVN VSP    + +     G     AD V   F       G V     VA  V FL 
Sbjct: 171 DGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLL----GRVGDPEEVAQVVAFLC 226

Query: 244 CRDSEFVTGHDLVVDGGF 261
              + FVTG D  VDGG+
Sbjct: 227 SDAASFVTGADYAVDGGY 244

Length = 261

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score =  142 bits (360), Expect = 2e-41
 Identities = 89/261 (34%), Positives = 127/261 (48%), Gaps = 16/261 (6%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR----QVATSIGVGKCHYVHC 70
            KVAIITG A GIG   A   A  G   IV+AD+  E       Q  +  G      V  
Sbjct: 2   SKVAIITGAAQGIGRAIAERLAADGFN-IVLADLNLEEAAKSTIQEISEAG-YNAVAVGA 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT++  V+AL+D  V+ +G  D+M +NAGI       +L +      +++A+NV G+  
Sbjct: 60  DVTDKDDVEALIDQAVEKFGSFDVMVNNAGIAPI--TPLLTITEEDLKKVYAVNVFGVLF 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ AAR   + G  G I+  +S+AG  G      Y  SK AV GL ++A+ +L   GI 
Sbjct: 118 GIQAAARQFKKLGHGGKIINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGIT 177

Query: 191 VNCVSPHGLATPL-------TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           VN  +P  + T +            G P  E    F    PL G +     VA  V FLA
Sbjct: 178 VNAYAPGIVKTEMWDYIDEEVGEIAGKPEGEGFAEFSSSIPL-GRLSEPEDVAGLVSFLA 236

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
             DS+++TG  ++VDGG + R
Sbjct: 237 SEDSDYITGQTILVDGGMVYR 257

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score =  141 bits (356), Expect = 5e-41
 Identities = 86/255 (33%), Positives = 126/255 (49%), Gaps = 12/255 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+GK A+ITG A GIG   A+ +   GAR + IADI  E  R  A  IG   C  +  DV
Sbjct: 1   LDGKTALITGSARGIGRAFAQAYVREGAR-VAIADINLEAARATAAEIGPAACA-ISLDV 58

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T++  +   V + V  +G +DI+ +NA +   +   ++D+   ++DRLFAINV G    +
Sbjct: 59  TDQASIDRCVAALVDRWGSIDILVNNAALFDLA--PIVDITRESYDRLFAINVSGTLFMM 116

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  AR M+  G  G I+  AS AG  G      Y  +K AVI L +SA + L  HGI VN
Sbjct: 117 QAVARAMIAQGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVN 176

Query: 193 CVSPHGLATP-------LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            ++P  +                  P  E ++L     P  G + RA  +    +FLA  
Sbjct: 177 AIAPGVVDGEHWDGVDAKFARYENRPRGEKKRLVGEAVPF-GRMGRAEDLTGMAIFLAST 235

Query: 246 DSEFVTGHDLVVDGG 260
           D++++      VDGG
Sbjct: 236 DADYIVAQTYNVDGG 250

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score =  139 bits (353), Expect = 3e-40
 Identities = 80/259 (30%), Positives = 123/259 (47%), Gaps = 15/259 (5%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKC 65
            N+L GKVA++TG A GIG   AR FA  GA  + +AD+   L  + A +I       + 
Sbjct: 2   MNRLAGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARV 60

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
             V  DVT+   V A V +  + +G LD++ +NAGI   +D   L +    + R FA+++
Sbjct: 61  LAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVFADP--LAMTDEDWRRCFAVDL 118

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G     +     MVE G RGSIV  AS            Y ++KH ++GL R+  ++  
Sbjct: 119 DGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYA 177

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
              +RVN ++P  + T LT   +      PA    +    Q      + R   VA   +F
Sbjct: 178 ARNVRVNAIAPGYIETQLT-EDWWNAQPDPAAARAETLALQPM--KRIGRPEEVAMTAVF 234

Query: 242 LACRDSEFVTGHDLVVDGG 260
           LA  ++ F+    + +DGG
Sbjct: 235 LASDEAPFINATCITIDGG 253

Length = 260

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score =  138 bits (351), Expect = 3e-40
 Identities = 75/264 (28%), Positives = 122/264 (46%), Gaps = 37/264 (14%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMI------------VIADIQDELGRQVATSI 60
           L GKVA++TG + GIG   A+  A  GA ++            V+A+I+   G+ +A   
Sbjct: 1   LAGKVALVTGASRGIGRAIAKRLARDGASVVVNYASSKAAAEEVVAEIEAAGGKAIA--- 57

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
                  V  DV++  QV  L D+  + +G +DI+ +NAG++      + +     FDR+
Sbjct: 58  -------VQADVSDPSQVARLFDAAEKAFGGVDILVNNAGVMLKK--PIAETSEEEFDRM 108

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           F +N +G    ++ AA+ + +G   G I+  +S   +        Y  SK AV    R  
Sbjct: 109 FTVNTKGAFFVLQEAAKRLRDG---GRIINISSSLTAAYTPNYGAYAGSKAAVEAFTRVL 165

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD--- 237
           + +LG  GI VN V+P  + T +    Y    +E  + +   +PL     R G   D   
Sbjct: 166 AKELGGRGITVNAVAPGPVDTDMF---YAGKTEEAVEGYAKMSPLG----RLGEPEDIAP 218

Query: 238 AVLFLACRDSEFVTGHDLVVDGGF 261
            V FLA  D  +V G  +  +GG+
Sbjct: 219 VVAFLASPDGRWVNGQVIRANGGY 242

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score =  138 bits (349), Expect = 8e-40
 Identities = 89/253 (35%), Positives = 129/253 (50%), Gaps = 11/253 (4%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVT 73
           GKVA++TGGASGIG   A+  A  GA  +V+ADI  E+  +VA +   G +   V CDVT
Sbjct: 1   GKVALVTGGASGIGLAIAKRLAAEGAA-VVVADIDPEIAEKVAEAAQGGPRALGVQCDVT 59

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +E QV++  +  V  +G LDI+ SNAGI +SS   + +     ++R   IN+ G     +
Sbjct: 60  SEAQVQSAFEQAVLEFGGLDIVVSNAGIATSS--PIAETSLEDWNRSMDINLTGHFLVSR 117

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            A R+M   G+ G+IV  AS      G     Y  +K A   L R  +++ G  GIRVN 
Sbjct: 118 EAFRIMKSQGIGGNIVFNASKNAVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNT 177

Query: 194 VSPH----GLATP--LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           V+P     G      +   A       +E+ +  +  L+  VL    VA+AV+ +A  D 
Sbjct: 178 VNPDAVFRGSKIWEGVWRAARAKAYGLLEEEYRTRNLLKREVL-PEDVAEAVVAMASEDF 236

Query: 248 EFVTGHDLVVDGG 260
              TG  + VDGG
Sbjct: 237 GKTTGAIVTVDGG 249

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score =  136 bits (344), Expect = 4e-39
 Identities = 82/258 (31%), Positives = 132/258 (51%), Gaps = 13/258 (5%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           KVA++TGGA GIG+  A   A  G   + +AD+ +E  ++ A  I    GK      DV+
Sbjct: 1   KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNEETAKETAKEINQAGGKAVAYKLDVS 59

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           ++ QV + +D   + +G  D+M +NAG+   +   +L++      +++ +NV+G+   ++
Sbjct: 60  DKDQVFSAIDQAAEKFGGFDVMVNNAGVAPIT--PILEITEEELKKVYNVNVKGVLFGIQ 117

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            AAR   + G  G I+  AS+AG  G    + Y  +K AV GL ++A+ +L   GI VN 
Sbjct: 118 AAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNA 177

Query: 194 VSPHGLATPL-------TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
             P  + TP+       T    G P  E  + F  +  L G       VA  V FLA  D
Sbjct: 178 YCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGLVSFLASED 236

Query: 247 SEFVTGHDLVVDGGFLIR 264
           S+++TG  ++VDGG +  
Sbjct: 237 SDYITGQSILVDGGMVYN 254

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score =  135 bits (342), Expect = 5e-39
 Identities = 91/252 (36%), Positives = 136/252 (53%), Gaps = 11/252 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L GK A+ITG ++GIG+  A  + + GA++ + A   D L +        G K   V CD
Sbjct: 7   LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCD 66

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V+   QV +++D      G +DI   NAGI++     +LD+    F RL   NV G+   
Sbjct: 67  VSQHQQVTSMLDQVTAELGGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVFLT 124

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            + AA+ MV+ G  G I+ TAS++G      ++ + Y  SK AVI L ++ +V+L  H I
Sbjct: 125 AQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKI 184

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RVN VSP  + T L       P  E + L+EP+ PL G + R   +A   L+LA   S +
Sbjct: 185 RVNSVSPGYILTELV-----EPYTEYQPLWEPKIPL-GRLGRPEELAGLYLYLASEASSY 238

Query: 250 VTGHDLVVDGGF 261
           +TG D+V+DGG+
Sbjct: 239 MTGSDIVIDGGY 250

Length = 253

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score =  136 bits (343), Expect = 6e-39
 Identities = 89/268 (33%), Positives = 133/268 (49%), Gaps = 21/268 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVI-------------ADIQDELGRQVATS 59
           LEGKVA ITG A G G   A   A  GA +I I                +++L       
Sbjct: 1   LEGKVAFITGAARGQGRAHAVRLAAEGADIIAIDLCAPLSDYPTYPLATREDLDETARLV 60

Query: 60  IGVG-KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             +G K      DV +  +V+A+V+  V+ +G+LD++ +NAG+LS       +L    +D
Sbjct: 61  EALGRKVLARKADVRDLAEVRAVVEDGVEQFGRLDVVVANAGVLSYG--RSWELSEEQWD 118

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
            +  IN+ G+    K     M+E G  GSI+ T+SVAG         Y  +KH ++GL +
Sbjct: 119 TVLDINLTGVWRTCKAVVPHMIERGNGGSIIITSSVAGLKALPGLAHYAAAKHGLVGLTK 178

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLT----CHAYGMPADEVEKLFEPQTPLEGVVLRAGH 234
           + + +L  +GIRVN + P+ + TP+          +   E  + F P  P+ G V     
Sbjct: 179 TLANELAEYGIRVNSIHPYSVDTPMIAPEAMREAFLKYPEAARAFMPALPVSGFV-PPED 237

Query: 235 VADAVLFLACRDSEFVTGHDLVVDGGFL 262
           VADAVL+LA  +S ++TGH L VD G L
Sbjct: 238 VADAVLWLASDESRYITGHQLPVDAGAL 265

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|235816 PRK06500, PRK06500, short chain dehydrogenase; Provisional

 Score =  135 bits (341), Expect = 1e-38
 Identities = 86/267 (32%), Positives = 127/267 (47%), Gaps = 40/267 (14%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVG 63
           ++L+GK A+ITGG SGIG  TAR F   GAR+ +       +   + ELG          
Sbjct: 2   SRLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALV----- 56

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
               +  D  +    KAL  +  + +G+LD +F NAG+  +    + D D + FDR F  
Sbjct: 57  ----IRADAGDVAAQKALAQALAEAFGRLDAVFINAGV--AKFAPLEDWDEAMFDRSFNT 110

Query: 124 NVRG----MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           NV+G    + A +   A          SIV   S+    G    + Y  SK A++ L ++
Sbjct: 111 NVKGPYFLIQALLPLLAN-------PASIVLNGSINAHIGMPNSSVYAASKAALLSLAKT 163

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAY---GMPADEVEKLFE---PQTPLEGVVLRAG 233
            S +L   GIRVN VSP  + TPL    Y   G+P   ++ +        PL G      
Sbjct: 164 LSGELLPRGIRVNAVSPGPVQTPL----YGKLGLPEATLDAVAAQIQALVPL-GRFGTPE 218

Query: 234 HVADAVLFLACRDSEFVTGHDLVVDGG 260
            +A AVL+LA  +S F+ G +++VDGG
Sbjct: 219 EIAKAVLYLASDESAFIVGSEIIVDGG 245

Length = 249

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score =  134 bits (340), Expect = 1e-38
 Identities = 88/257 (34%), Positives = 121/257 (47%), Gaps = 13/257 (5%)

Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY 67
           N      GK  ++TG +SGIG   A   A  GAR++  A     L R +A   G   C  
Sbjct: 2   NMAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR-LAGETG---CEP 57

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  DV ++    A + + +   G  D + + AGI  +S ++ LD+    FDR+ A+N RG
Sbjct: 58  LRLDVGDD----AAIRAALAAAGAFDGLVNCAGI--ASLESALDMTAEGFDRVMAVNARG 111

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
            A   +H AR M+  G  GSIV  +S A   G      Y  SK A+  + R   V+LG H
Sbjct: 112 AALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPH 171

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           GIRVN V+P    TP+   A+  P      L     PL G       VA  +LFL    +
Sbjct: 172 GIRVNSVNPTVTLTPMAAEAWSDPQKSGPML--AAIPL-GRFAEVDDVAAPILFLLSDAA 228

Query: 248 EFVTGHDLVVDGGFLIR 264
             V+G  L VDGG+  R
Sbjct: 229 SMVSGVSLPVDGGYTAR 245

Length = 245

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score =  134 bits (340), Expect = 1e-38
 Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 17/255 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV----IADIQDELGRQVATSIGVGKCHYV 68
           L+GKVA++TG +SGIG+  A   A  GA ++V      D  +E+  ++  ++G GK   V
Sbjct: 1   LKGKVALVTGASSGIGKAIAIRLATAGANVVVNYRSKEDAAEEVVEEI-KAVG-GKAIAV 58

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV+ E  V AL  S ++ +G LDI+ +NAG+    D +  ++    ++++  +N+ G 
Sbjct: 59  QADVSKEEDVVALFQSAIKEFGTLDILVNNAGL--QGDASSHEMTLEDWNKVIDVNLTGQ 116

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             C + A +   +  ++G I+  +SV          +Y  SK  V  + ++ + +    G
Sbjct: 117 FLCAREAIKRFRKSKIKGKIINMSSVHEKIPWPGHVNYAASKGGVKMMTKTLAQEYAPKG 176

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLACR 245
           IRVN ++P  + TP+   A+  P  E         P+     R G    +A A  +LA  
Sbjct: 177 IRVNAIAPGAINTPINAEAWDDP--EQRADLLSLIPMG----RIGEPEEIAAAAAWLASD 230

Query: 246 DSEFVTGHDLVVDGG 260
           ++ +VTG  L VDGG
Sbjct: 231 EASYVTGTTLFVDGG 245

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score =  134 bits (340), Expect = 2e-38
 Identities = 82/255 (32%), Positives = 129/255 (50%), Gaps = 19/255 (7%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ----VATSIGVGKCHYVHCD 71
           +VAI+T   SGIG+  A L A  G   I I    DE G +       S GV +      D
Sbjct: 3   QVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGV-RAEIRQLD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++  +    +D  +Q  G++D++ +NAG ++      LD+DF  + ++F ++V G   C
Sbjct: 61  LSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK--APFLDMDFDEWRKIFTVDVDGAFLC 118

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + AAR MV+ G  G I+   SV         + Y  +KHA+ GL ++ +++L  HGI V
Sbjct: 119 SQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILV 178

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSE 248
           N V+P  +ATP+     GM   +V+    P  PL     R G    +A  V +L    + 
Sbjct: 179 NAVAPGAIATPMN----GMDDSDVKPDSRPGIPLG----RPGDTHEIASLVAWLCSEGAS 230

Query: 249 FVTGHDLVVDGGFLI 263
           + TG  L+VDGGF++
Sbjct: 231 YTTGQSLIVDGGFML 245

Length = 256

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score =  133 bits (336), Expect = 8e-38
 Identities = 78/261 (29%), Positives = 125/261 (47%), Gaps = 23/261 (8%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDV 72
           GK A++TG ASGIG   AR  A  GA  +V+ D  +E     A   G   G   Y+  DV
Sbjct: 1   GKTALVTGAASGIGLAIARALAAAGAN-VVVNDFGEEGAEAAAKVAGDAGGSVIYLPADV 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL---DLDFSAFDRLFAINVRGMA 129
           T E ++  ++ +    +G LDI+ +NAGI     Q V    +     +DR+ A+ +    
Sbjct: 60  TKEDEIADMIAAAAAEFGGLDILVNNAGI-----QHVAPIEEFPPEDWDRIIAVMLTSAF 114

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             ++ A   M + G  G I+  AS  G      ++ Y  +KH +IGL +  ++++  HGI
Sbjct: 115 HTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAEHGI 173

Query: 190 RVNCVSPHGLATPLT-------CHAYGMPADEV--EKLFEPQTPLEGVVLRAGHVADAVL 240
            VN + P  + TPL            G+P ++V  E + + Q       +    VA+  L
Sbjct: 174 TVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLKGQP--TKRFVTVDEVAETAL 231

Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           +LA   +  +TG  +V+DGG+
Sbjct: 232 YLASDAAAQITGQAIVLDGGW 252

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score =  133 bits (335), Expect = 8e-38
 Identities = 83/252 (32%), Positives = 136/252 (53%), Gaps = 10/252 (3%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG---KCHYVHCDV 72
           KV +ITGG SG+G  TA   A  GA++ ++   ++ L    A  + +    +   +  DV
Sbjct: 4   KVVLITGGGSGLGLATAVRLAKEGAKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADV 63

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++E QV+A VD+TV+ +G++D  F+NAGI    + T  D     FD++ +IN+RG+   +
Sbjct: 64  SDEAQVEAYVDATVEQFGRIDGFFNNAGIEGKQNLTE-DFGADEFDKVVSINLRGVFYGL 122

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +   +VM E G  G IV TASV G  G   ++ Y  +KH V+GL R+++V+ G +GIR+N
Sbjct: 123 EKVLKVMREQGS-GMIVNTASVGGIRGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRIN 181

Query: 193 CVSPHGLATPLTCHAY----GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
            ++P  + TP+   +         +E  + F    P++        VA  V FL   D+ 
Sbjct: 182 AIAPGAILTPMVEGSLKQLGPENPEEAGEEFVSVNPMKRFG-EPEEVAAVVAFLLSDDAG 240

Query: 249 FVTGHDLVVDGG 260
           +V    + +DGG
Sbjct: 241 YVNAAVVPIDGG 252

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score =  132 bits (335), Expect = 1e-37
 Identities = 83/258 (32%), Positives = 127/258 (49%), Gaps = 20/258 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVH 69
            L GK A++TGG+ G+G   A    + GAR+++ A   +EL    A   ++G+    ++ 
Sbjct: 9   DLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGI-DALWIA 67

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV +E  ++ L + T++ +G +DI+ +NAG  ++      D    A+D++  +NVRG+ 
Sbjct: 68  ADVADEADIERLAEETLERFGHVDILVNNAG--ATWGAPAEDHPVEAWDKVMNLNVRGLF 125

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT----DYHMSKHAVIGLVRSASVQLG 185
              +  A+  +     G I+  ASVAG  G          Y+ SK AVI   R+ + + G
Sbjct: 126 LLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWG 185

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFL 242
            HGIRVN ++P    T +T    G      E L    TPL     R G   D   A L L
Sbjct: 186 PHGIRVNAIAPGFFPTKMT---RGTLERLGEDLLA-HTPLG----RLGDDEDLKGAALLL 237

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   S+ +TG  L VDGG
Sbjct: 238 ASDASKHITGQILAVDGG 255

Length = 259

>gnl|CDD|235853 PRK06701, PRK06701, short chain dehydrogenase; Provisional

 Score =  133 bits (337), Expect = 1e-37
 Identities = 86/256 (33%), Positives = 128/256 (50%), Gaps = 18/256 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHY 67
            KL+GKVA+ITGG SGIG   A LFA  GA + ++   + E   +    +   GV KC  
Sbjct: 42  GKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGV-KCLL 100

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  DV++E   K  V+ TV+  G+LDI+ +NA         + D+     D+ F  N+  
Sbjct: 101 IPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQQS-LEDITAEQLDKTFKTNIYS 159

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                K A   + +G    +I+ T S+ G  G +   DY  +K A+    RS +  L   
Sbjct: 160 YFHMTKAALPHLKQGS---AIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQK 216

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
           GIRVN V+P  + TPL    +    ++V + F   TP++    R G    +A A +FLA 
Sbjct: 217 GIRVNAVAPGPIWTPLIPSDF--DEEKVSQ-FGSNTPMQ----RPGQPEELAPAYVFLAS 269

Query: 245 RDSEFVTGHDLVVDGG 260
            DS ++TG  L V+GG
Sbjct: 270 PDSSYITGQMLHVNGG 285

Length = 290

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score =  131 bits (331), Expect = 3e-37
 Identities = 80/259 (30%), Positives = 120/259 (46%), Gaps = 22/259 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+ KVAI+TGG+ GIG+       + G+ +I   DI++                Y   DV
Sbjct: 4   LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINF-DIKEP---------SYNDVDYFKVDV 53

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           +N+ QV   +D  +  YG++DI+ +NAGI S     +  ++   +DR+  +NV G+    
Sbjct: 54  SNKEQVIKGIDYVISKYGRIDILVNNAGIESYG--AIHAVEEDEWDRIINVNVNGIFLMS 111

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K+    M++   +G I+  ASV      +    Y  SKHAV+GL RS +V      IR  
Sbjct: 112 KYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYA-PTIRCV 169

Query: 193 CVSPHGLATPLTCHA----YGMPADEVEKLFEP---QTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TPL   A     G   + VE+         P+   V +   VA  V FLA  
Sbjct: 170 AVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPM-KRVGKPEEVAYVVAFLASD 228

Query: 246 DSEFVTGHDLVVDGGFLIR 264
            + F+TG  + VDGG    
Sbjct: 229 LASFITGECVTVDGGLRAL 247

Length = 258

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score =  131 bits (331), Expect = 5e-37
 Identities = 82/271 (30%), Positives = 128/271 (47%), Gaps = 38/271 (14%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+GK+ I+TGG+SGIG    +    +GA  +V ADI                  +V  DV
Sbjct: 7   LQGKIIIVTGGSSGIGLAIVKELLANGAN-VVNADIHG-------GDGQHENYQFVPTDV 58

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD---------LDFSAFDRLFAI 123
           ++  +V   V   ++ +G++D + +NAGI  +  + ++D         L+ +AFD++F I
Sbjct: 59  SSAEEVNHTVAEIIEKFGRIDGLVNNAGI--NIPRLLVDEKDPAGKYELNEAAFDKMFNI 116

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           N +G+    +  AR MV+    G IV  +S AG  G + ++ Y  +K A+    RS + +
Sbjct: 117 NQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKE 175

Query: 184 LGVHGIRVNCVSP-----HGLATPLTCHAYGMPADE-VEKLFE-----PQTPLEGVVLRA 232
           LG H IRV  V+P      GL TP    A        VE+L          PL     R+
Sbjct: 176 LGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPLG----RS 231

Query: 233 GH---VADAVLFLACRDSEFVTGHDLVVDGG 260
           G    VAD V +L    + ++TG    + GG
Sbjct: 232 GKLSEVADLVCYLLSDRASYITGVTTNIAGG 262

Length = 266

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score =  130 bits (329), Expect = 7e-37
 Identities = 88/258 (34%), Positives = 128/258 (49%), Gaps = 18/258 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHC 70
           L GK+A++TG + GIGE  A+L A  GA +IV +   D   + VA +I    GK   + C
Sbjct: 6   LTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGC-QAVADAIVAAGGKAEALAC 64

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            +    Q+ AL     + +G+LDI+ +NA   +     +LD D  AF +   +N+RG   
Sbjct: 65  HIGEMEQIDALFAHIRERHGRLDILVNNAAA-NPYFGHILDTDLGAFQKTVDVNIRGYFF 123

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               A ++M E G  GSIV  ASV G   G  +  Y ++K AVI + ++ + +    GIR
Sbjct: 124 MSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIR 182

Query: 191 VNCVSPHGL-----ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           VN + P GL     A+ L  +      D + K      PL         +A AVL+LA  
Sbjct: 183 VNALLP-GLTDTKFASALFKN------DAILKQALAHIPL-RRHAEPSEMAGAVLYLASD 234

Query: 246 DSEFVTGHDLVVDGGFLI 263
            S + TG  L VDGG+L 
Sbjct: 235 ASSYTTGECLNVDGGYLS 252

Length = 252

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  135 bits (342), Expect = 1e-36
 Identities = 85/252 (33%), Positives = 129/252 (51%), Gaps = 12/252 (4%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT 73
           + +V ++TG A GIG    + FA  G + +V+AD   E  R+ A S+G    H +  DV+
Sbjct: 4   QSRVVLVTGAAGGIGRAACQRFARAGDQ-VVVADRNVERARERADSLG-PDHHALAMDVS 61

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +E Q++   +   + +G++D++ +NAG+   +    LD     F RL AIN+ G     +
Sbjct: 62  DEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAR 121

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            A R+M+E G   +IV  AS AG     +RT Y  SK AVI L RS + +    GIRVN 
Sbjct: 122 EALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNA 181

Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL----RAGHVADAVLFLACRDSEF 249
           V P  + T +      +   E     +P      + L    R   +A+AV FLA   + +
Sbjct: 182 VLPGYVRTQM------VAELERAGKLDPSAVRSRIPLGRLGRPEEIAEAVFFLASDQASY 235

Query: 250 VTGHDLVVDGGF 261
           +TG  LVVDGG+
Sbjct: 236 ITGSTLVVDGGW 247

Length = 520

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score =  129 bits (326), Expect = 2e-36
 Identities = 78/258 (30%), Positives = 120/258 (46%), Gaps = 22/258 (8%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT 73
           +G VA++TGGASG+G  T       GA++ VI D+ +  G  VA       C +V  DVT
Sbjct: 1   KGLVAVVTGGASGLGLATVERLLAQGAKV-VILDLPNSPGETVAKLGD--NCRFVPVDVT 57

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGI------LSSSDQTVLDLDFSAFDRLFAINVRG 127
           +E  VKA +      +G+LDI+ + AGI       +   Q    L+   F R+  +N+ G
Sbjct: 58  SEKDVKAALALAKAKFGRLDIVVNCAGIAVAAKTYNKKGQQPHSLE--LFQRVINVNLIG 115

Query: 128 MAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
               ++ AA  M +     GG RG I+ TASVA   G   +  Y  SK  ++G+    + 
Sbjct: 116 TFNVIRLAAGAMGKNEPDQGGERGVIINTASVAAFEGQIGQAAYSASKGGIVGMTLPIAR 175

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
            L   GIRV  ++P    TPL     G+P ++V      Q P    +      A  V  +
Sbjct: 176 DLAPQGIRVVTIAPGLFDTPLL---AGLP-EKVRDFLAKQVPFPSRLGDPAEYAHLVQHI 231

Query: 243 ACRDSEFVTGHDLVVDGG 260
              ++ ++ G  + +DG 
Sbjct: 232 I--ENPYLNGEVIRLDGA 247

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score =  128 bits (323), Expect = 5e-36
 Identities = 80/256 (31%), Positives = 127/256 (49%), Gaps = 15/256 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR----QVATSIGVGKCHY 67
            L+G+VA +TG  SGIG+  A   A  GA  + + D++ + G     +   + G  +   
Sbjct: 5   DLDGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAG-RRAIQ 62

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  DVT++  ++A V  T    G L +  + AGI ++      +++   +  +  IN+ G
Sbjct: 63  IAADVTSKADLRAAVARTEAELGALTLAVNAAGIANA--NPAEEMEEEQWQTVMDINLTG 120

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSC--GGKRRTDYHMSKHAVIGLVRSASVQLG 185
           +    +  AR M+E G  GSIV  AS++G     G  +  Y+ SK  VI L +S +++  
Sbjct: 121 VFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWV 179

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             GIRVN +SP   ATP+             KLFE QTP+   + +   +    +FL   
Sbjct: 180 GRGIRVNSISPGYTATPMNTRP---EMVHQTKLFEEQTPM-QRMAKVDEMVGPAVFLLSD 235

Query: 246 DSEFVTGHDLVVDGGF 261
            + F TG DL+VDGGF
Sbjct: 236 AASFCTGVDLLVDGGF 251

Length = 254

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score =  128 bits (323), Expect = 5e-36
 Identities = 73/237 (30%), Positives = 113/237 (47%), Gaps = 16/237 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
             L+GKVA+ITG +SGIGE TAR  A+ GA++++ A  ++ L   +A  IG G    +  
Sbjct: 2   TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERL-EALADEIGAGAALALAL 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+   V+A +++  + +G++DI+ +NAG+       + + D   +DR+   NV+G+  
Sbjct: 61  DVTDRAAVEAAIEALPEEFGRIDILVNNAGLALGDP--LDEADLDDWDRMIDTNVKGLLN 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +     MVE    G I+   S+AG         Y  +K AV         +L   GIR
Sbjct: 119 GTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIR 177

Query: 191 VNCVSPHGLATPL----TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           V  +SP  + T              AD+V K            L    +A+AVLF A
Sbjct: 178 VTVISPGLVETTEFSTVRFEGDDERADKVYKGGTA--------LTPEDIAEAVLFAA 226

Length = 246

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score =  128 bits (323), Expect = 5e-36
 Identities = 79/259 (30%), Positives = 128/259 (49%), Gaps = 24/259 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GKVA ITGG +GIG+  A+ FA+ GA + +     + L       +S   G+ H + C
Sbjct: 1   LKGKVAFITGGGTGIGKAIAKAFAELGASVAIAGRKPEVLEAAAEEISSATGGRAHPIQC 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAINVRGM 128
           DV +   V+A VD T++ +G++DI+ +NA    L+ ++     L  + F  +  I++ G 
Sbjct: 61  DVRDPEAVEAAVDETLKEFGKIDILINNAAGNFLAPAE----SLSPNGFKTVIDIDLNGT 116

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               K   + ++E    GSI+  ++     G   +     +K  V  L RS +V+ G +G
Sbjct: 117 FNTTKAVGKRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYG 176

Query: 189 IRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLRAG---HVADAVLF 241
           IRVN ++P  + T       GM    P+ + EK    + PL     R G    +A+  LF
Sbjct: 177 IRVNAIAPGPIPT-----TEGMERLAPSGKSEKKMIERVPLG----RLGTPEEIANLALF 227

Query: 242 LACRDSEFVTGHDLVVDGG 260
           L    + ++ G  LVVDGG
Sbjct: 228 LLSDAASYINGTTLVVDGG 246

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score =  127 bits (322), Expect = 5e-36
 Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 17/251 (6%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT 73
           +GKVA+IT  A GIG   A  FA  GA +I   DI +E  +++              DVT
Sbjct: 1   DGKVALITAAAQGIGRAIALAFAREGANVIA-TDINEEKLKELE---RGPGITTRVLDVT 56

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +    K  V +  +  G++D++F+ AG +     ++LD +   +D    +NVR M   +K
Sbjct: 57  D----KEQVAALAKEEGRIDVLFNCAGFVHHG--SILDCEDDDWDFAMNLNVRSMYLMIK 110

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
                M+     GSI+  +SVA S  G   R  Y  +K AVIGL +S +      GIR N
Sbjct: 111 AVLPKMLARK-DGSIINMSSVASSIKGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCN 169

Query: 193 CVSPHGLATPLT---CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
            + P  + TP       A   P +E  K F  + PL G +     VA   ++LA  +S +
Sbjct: 170 AICPGTVDTPSLEERIQAQPDP-EEALKAFAARQPL-GRLATPEEVAALAVYLASDESAY 227

Query: 250 VTGHDLVVDGG 260
           VTG  +V+DGG
Sbjct: 228 VTGTAVVIDGG 238

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score =  127 bits (321), Expect = 1e-35
 Identities = 85/264 (32%), Positives = 127/264 (48%), Gaps = 29/264 (10%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHC 70
           KL GK A+ITG   GIGE  AR+FA HGA  +++ DI  E+ +      G G +C  V  
Sbjct: 3   KLTGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVA 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI--NVRGM 128
           DV +   V A +    +  G++DI+ +NAG+          LD S  DR F I  N++G+
Sbjct: 62  DVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRLGSF----LDMSDEDRDFHIDINIKGV 117

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               K     M+     G IV  +SV G        T Y ++K A++GL +S +V+    
Sbjct: 118 WNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQS 176

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP-------LEGVVLR----AGHVA 236
           GIRVN + P  + TP+        A+ + +   P+ P        + + LR       V 
Sbjct: 177 GIRVNAICPGYVRTPM--------AESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVG 228

Query: 237 DAVLFLACRDSEFVTGHDLVVDGG 260
           +   FLA  +S ++TG   V+DGG
Sbjct: 229 ELAAFLASDESSYLTGTQNVIDGG 252

Length = 263

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score =  126 bits (318), Expect = 2e-35
 Identities = 66/250 (26%), Positives = 105/250 (42%), Gaps = 17/250 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           + L+GKV  ITGG  G+G  TA   A  GAR+ +I      L + +              
Sbjct: 3   HSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADA-LRIGGI 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+ +    +  VD   + +G+LD + + AG       T+ D D   +DR++ +NV+    
Sbjct: 62  DLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVW--GTIADGDADTWDRMYGVNVKTTLN 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K A   +   G  G IV   + A    G     Y  +K  V  L  + + +L   GI 
Sbjct: 120 ASKAALPALTASGG-GRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGIT 178

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V P  + TP   +   MP  +  +   P+            +A  + FL   +++ +
Sbjct: 179 VNAVLPSIIDTPP--NRADMPDADFSRWVTPE-----------QIAAVIAFLLSDEAQAI 225

Query: 251 TGHDLVVDGG 260
           TG  + VDGG
Sbjct: 226 TGASIPVDGG 235

Length = 239

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score =  126 bits (318), Expect = 3e-35
 Identities = 71/258 (27%), Positives = 117/258 (45%), Gaps = 15/258 (5%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYVHC 70
             +VA++ GG   +GE      A+ G   + +ADI  E   +VA  I      K +    
Sbjct: 1   MNQVAVVIGGGQTLGEFLCHGLAEAGYD-VAVADINSENAEKVADEINAEYGEKAYGFGA 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D TNE  V AL     + + ++D++  +AGI  S+  T  D +   FDR   +N+ G   
Sbjct: 60  DATNEQSVIALSKGVDEIFKRVDLLVYSAGIAKSAKIT--DFELGDFDRSLQVNLVGYFL 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C +  +++M+  G++G I+   S +G  G K  + Y  +K   +GL +S ++ L  HGI 
Sbjct: 118 CAREFSKLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEHGIT 177

Query: 191 VNCVSPHGLAT--------PLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           VN +    L          P      G+   EVE+ +  + PL         V + +LF 
Sbjct: 178 VNSLMLGNLLKSPMFQSLLPQYAKKLGIKESEVEQYYIDKVPL-KRGCDYQDVLNMLLFY 236

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   + + TG  + + GG
Sbjct: 237 ASPKASYCTGQSINITGG 254

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score =  124 bits (313), Expect = 1e-34
 Identities = 78/254 (30%), Positives = 124/254 (48%), Gaps = 14/254 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVI---ADIQDELGRQVATSIGV--GKCHY 67
           L+ +  +ITGG+ G+G   A   A  GA +IV+             VA  I    GK   
Sbjct: 4   LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALG 63

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  DV +    +A +D+ V+ +G+LDI+ +NAGI  ++D    +L    +D +  +N+ G
Sbjct: 64  LAFDVRDFAATRAALDAGVEEFGRLDILVNNAGI--ATDAAFAELSIEEWDDVIDVNLDG 121

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                + A   M+     G IV  ASVAG  G + + +Y  SK  +IGL ++ + +L   
Sbjct: 122 FFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPR 181

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           GI VN V+P  + TP+  +A   P + +        P++ +      VA  V FL    +
Sbjct: 182 GITVNAVAPGAINTPMADNA--APTEHLLNP----VPVQRLG-EPDEVAALVAFLVSDAA 234

Query: 248 EFVTGHDLVVDGGF 261
            +VTG  + VDGGF
Sbjct: 235 SYVTGQVIPVDGGF 248

Length = 249

>gnl|CDD|187617 cd05359, ChcA_like_SDR_c, 1-cyclohexenylcarbonyl_coenzyme A_reductase (ChcA)_like, classical (c) SDRs

 Score =  122 bits (309), Expect = 6e-34
 Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 8/248 (3%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNE 75
           A++TGG+ GIG+  A   A+ GA +++      +   +VA  I    GK   V  DV+  
Sbjct: 1   ALVTGGSRGIGKAIALRLAERGADVVINYRKSKDAAAEVAAEIEELGGKAVVVRADVSQP 60

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             V+ +  +  + +G+LD++ SNA   + + + + +L  + +D     N++ +  C + A
Sbjct: 61  QDVEEMFAAVKERFGRLDVLVSNAA--AGAFRPLSELTPAHWDAKMNTNLKALVHCAQQA 118

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
           A++M E G  G IV  +S+              +K A+  LVR  +V+LG  GIRVN VS
Sbjct: 119 AKLMRERG-GGRIVAISSLGSIRALPNYLAVGTAKAALEALVRYLAVELGPRGIRVNAVS 177

Query: 196 PHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL 255
           P  + T    H      D +E      TP  G V     VADAV FL    +  +TG  L
Sbjct: 178 PGVIDTDALAHFPN-REDLLEAAAA-NTPA-GRVGTPQDVADAVGFLCSDAARMITGQTL 234

Query: 256 VVDGGFLI 263
           VVDGG  I
Sbjct: 235 VVDGGLSI 242

This subgroup contains classical SDR proteins, including members identified as 1-cyclohexenylcarbonyl coenzyme A reductase. ChcA of Streptomyces collinus is implicated in the final reduction step of shikimic acid to ansatrienin. ChcA shows sequence similarity to the SDR family of NAD-binding proteins, but it lacks the conserved Tyr of the characteristic catalytic site. This subgroup also contains the NADH-dependent enoyl-[acyl-carrier-protein(ACP)] reductase FabL from Bacillus subtilis. This enzyme participates in bacterial fatty acid synthesis, in type II fatty-acid synthases and catalyzes the last step in each elongation cycle. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|187602 cd05344, BKR_like_SDR_like, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR)-like, SDR

 Score =  122 bits (309), Expect = 8e-34
 Identities = 71/255 (27%), Positives = 115/255 (45%), Gaps = 14/255 (5%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDV 72
           GKVA++T  +SGIG   AR  A  GAR + I     E   + A+ +  G      V  D+
Sbjct: 1   GKVALVTAASSGIGLAIARALAREGAR-VAICARNRENLERAASELRAGGAGVLAVVADL 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+   +  LV+     +G++DI+ +NAG          +L    +   F + +  +   V
Sbjct: 60  TDPEDIDRLVEKAGDAFGRVDILVNNAG--GPPPGPFAELTDEDWLEAFDLKLLSVIRIV 117

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +     M E G  G IV  +S+            ++++  +IGLV++ S +L   G+ VN
Sbjct: 118 RAVLPGMKERG-WGRIVNISSLTVKEPEPNLVLSNVARAGLIGLVKTLSRELAPDGVTVN 176

Query: 193 CVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + T              G+  +E EK    Q PL G V +   +A  + FLA  
Sbjct: 177 SVLPGYIDTERVRRLLEARAEKEGISVEEAEKEVASQIPL-GRVGKPEELAALIAFLASE 235

Query: 246 DSEFVTGHDLVVDGG 260
            + ++TG  ++VDGG
Sbjct: 236 KASYITGQAILVDGG 250

This subgroup resembles the SDR family, but does not have a perfect match to the NAD-binding motif or the catalytic tetrad characteristic of the SDRs. It includes the SDRs, Q9HYA2 from Pseudomonas aeruginosa PAO1 and APE0912 from Aeropyrum pernix K1. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|180462 PRK06198, PRK06198, short chain dehydrogenase; Provisional

 Score =  122 bits (307), Expect = 1e-33
 Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 18/250 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG--KCHYVHC 70
           L+GKVA++TGG  G+G   AR FA+ GA  +VI     E G   A  +     K  +V  
Sbjct: 4   LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQA 63

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG--- 127
           D+++    + +V +  + +G+LD + + AG+  +   T+LD     FDR FA+NVR    
Sbjct: 64  DLSDVEDCRRVVAAADEAFGRLDALVNAAGL--TDRGTILDTSPELFDRHFAVNVRAPFF 121

Query: 128 -MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            M   +K     M      G+IV   S++   G      Y  SK A+  L R+A+  L  
Sbjct: 122 LMQEAIKL----MRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLR 177

Query: 187 HGIRVNCVSPHGLATP----LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           + IRVN ++   +AT     +    +G P D +EK      P  G +L    VA AV FL
Sbjct: 178 NRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKA-AATQPF-GRLLDPDEVARAVAFL 235

Query: 243 ACRDSEFVTG 252
              +S  +TG
Sbjct: 236 LSDESGLMTG 245

Length = 260

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  121 bits (304), Expect = 3e-33
 Identities = 82/255 (32%), Positives = 134/255 (52%), Gaps = 18/255 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           + +GKVA+ITGG  GIG   A  F   GA++ V+ +  +   +++    GV     + CD
Sbjct: 4   RFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-REKGV---FTIKCD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           V N  QVK   +   + +G++D++ +NAGI  L   ++     D   ++++  IN+ G A
Sbjct: 60  VGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEE----FDEEKYNKMIKINLNG-A 114

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAG-SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               +    +++    G+IV  AS AG     +  T Y ++K  +I L R  + +LG +G
Sbjct: 115 IYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYG 174

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKL---FEPQTPLEGVVLRAGHVADAVLFLACR 245
           IRVN V+P  + T +T    G   +E EKL   F  +T L+    +   +A+ VLFLA  
Sbjct: 175 IRVNAVAPGWVETDMTLS--GKSQEEAEKLRELFRNKTVLK-TTGKPEDIANIVLFLASD 231

Query: 246 DSEFVTGHDLVVDGG 260
           D+ ++TG  +V DGG
Sbjct: 232 DARYITGQVIVADGG 246

Length = 255

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score =  121 bits (305), Expect = 4e-33
 Identities = 88/272 (32%), Positives = 118/272 (43%), Gaps = 33/272 (12%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVI-------ADIQDELGRQVATSIGVGK 64
            L G+VA+ITGG SGIG      F   GAR+ V+       A ++   G  V    G   
Sbjct: 3   WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEG--- 59

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI----LSSSDQTVLDLDFSAFDRL 120
                 DVT+    +  VD TV  +G+LD    NAGI     S  D     LD +AFD +
Sbjct: 60  ------DVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLD-TAFDEI 112

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           F +NV+G     K A   +      GS++ T S +    G     Y  SKHAV+GLVR  
Sbjct: 113 FNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQL 170

Query: 181 SVQLGVHGIRVNCVSPHGLATPLT-CHAYGMPADEV------EKLFEPQTPLEGVVLRAG 233
           + +L    IRVN V+P G  T L    + G     +        +    TPL     +  
Sbjct: 171 AYELAPK-IRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL-QFAPQPE 228

Query: 234 HVADAVLFLACR-DSEFVTGHDLVVDGGFLIR 264
                 + LA R +S  +TG  +  DGG  IR
Sbjct: 229 DHTGPYVLLASRRNSRALTGVVINADGGLGIR 260

Length = 263

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score =  124 bits (314), Expect = 8e-33
 Identities = 85/252 (33%), Positives = 128/252 (50%), Gaps = 16/252 (6%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
            +V  ITGGA GIG   A  FA  G R+++I D   E  +++A ++G  +   V  D+T+
Sbjct: 269 PRVVAITGGARGIGRAVADRFAAAGDRLLII-DRDAEGAKKLAEALG-DEHLSVQADITD 326

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGI----LSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           E  V++        +G+LD++ +NAGI      S +Q+  D     F R++ +N+ G  A
Sbjct: 327 EAAVESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAED-----FTRVYDVNLSGAFA 381

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C + AAR+M +GGV   IV   S+A       R  Y  SK AV  L RS + +    GIR
Sbjct: 382 CARAAARLMSQGGV---IVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIR 438

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V+P  + TP           + + +   + PL G +     VA+A+ FLA   + +V
Sbjct: 439 VNTVAPGYIETPAVLALKASGRADFDSIRR-RIPL-GRLGDPEEVAEAIAFLASPAASYV 496

Query: 251 TGHDLVVDGGFL 262
            G  L VDGG+ 
Sbjct: 497 NGATLTVDGGWT 508

Length = 520

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  119 bits (300), Expect = 9e-33
 Identities = 66/255 (25%), Positives = 114/255 (44%), Gaps = 23/255 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +   K  +ITG ASGIG   AR F   GA++  + D QD+           G  H++  D
Sbjct: 2   EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGV-DKQDK-------PDLSGNFHFLQLD 53

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           ++++      ++        +DI+ + AGIL    + +LD     +  +F  N+      
Sbjct: 54  LSDD------LEPLFDWVPSVDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLL 106

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +     M+E    G I+   S+A    G     Y  SKHA+ G  +  ++     GI+V
Sbjct: 107 TRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQV 165

Query: 192 NCVSPHGLATPLTC--HAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
             ++P  + TP+T      G  AD V +    +TP+         VA+  LFLA   +++
Sbjct: 166 FGIAPGAVKTPMTAADFEPGGLADWVAR----ETPI-KRWAEPEEVAELTLFLASGKADY 220

Query: 250 VTGHDLVVDGGFLIR 264
           + G  + +DGG+ ++
Sbjct: 221 MQGTIVPIDGGWTLK 235

Length = 235

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score =  119 bits (300), Expect = 1e-32
 Identities = 79/259 (30%), Positives = 124/259 (47%), Gaps = 18/259 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVH 69
           + + KVAI+TG A GIG+  A   A  GA  +V+ADI  E   +VA  I    G    V 
Sbjct: 3   RFDDKVAIVTGAAGGIGQAYAEALAREGAS-VVVADINAEGAERVAKQIVADGGTAIAVQ 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAINVRGM 128
            DV++    KA+ D+TV  +G +D + +NA I       +L  + +  + +  ++N+ G 
Sbjct: 62  VDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGA 121

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             C +   + M + G  G+IV  +S A          Y ++K  + GL +  + +LG   
Sbjct: 122 LVCTRAVYKHMAKRG-GGAIVNQSSTAAWLYS---NFYGLAKVGLNGLTQQLARELGGMN 177

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV---LFLACR 245
           IRVN ++P  + T  T      P + V  + +   PL     R G   D V   LFL   
Sbjct: 178 IRVNAIAPGPIDTEATRTV--TPKEFVADMVK-GIPLS----RMGTPEDLVGMCLFLLSD 230

Query: 246 DSEFVTGHDLVVDGGFLIR 264
           ++ ++TG    VDGG +IR
Sbjct: 231 EASWITGQIFNVDGGQIIR 249

Length = 250

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score =  119 bits (300), Expect = 2e-32
 Identities = 73/257 (28%), Positives = 126/257 (49%), Gaps = 13/257 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ---VATSIGVGKCHYV 68
           +L+G+ A+ITG + GIG   AR F   GA ++++A   D L +    +A      + H +
Sbjct: 6   RLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGL 65

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV+++   +A++D    ++  L I+ +NAG      +  +D     +  +F  N+   
Sbjct: 66  AADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR--KAAIDYTEDEWRGIFETNLFS- 122

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           A  +   A  +++     +IV   SV+G    +    Y M+K A++ + R+ +V+    G
Sbjct: 123 AFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDG 182

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLACRD 246
           IRVN V+P  + TPLT      P  + +   +   +TP+   V     VA AV FL    
Sbjct: 183 IRVNAVAPWYIRTPLT----SGPLSDPDYYEQVIERTPM-RRVGEPEEVAAAVAFLCMPA 237

Query: 247 SEFVTGHDLVVDGGFLI 263
           + ++TG  + VDGGFL 
Sbjct: 238 ASYITGQCIAVDGGFLR 254

Length = 257

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score =  118 bits (297), Expect = 3e-32
 Identities = 79/254 (31%), Positives = 131/254 (51%), Gaps = 10/254 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           LEGKVA++TG  +G+G+  A   A+ GA ++     +    +Q   ++G  +   +  D+
Sbjct: 3   LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALG-RRFLSLTADL 61

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINVRGMAA 130
           ++   +KALVDS V+ +G +DI+ +NAGI+  +D      +FS   +D +  +N++ +  
Sbjct: 62  SDIEAIKALVDSAVEEFGHIDILVNNAGIIRRADA----EEFSEKDWDDVMNVNLKSVFF 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + AA+  ++ G  G I+  AS+    GG R   Y  SKHAV GL +  + +    GI 
Sbjct: 118 LTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGIN 177

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN ++P  +AT  T     + ADE       +    G       +    +FLA   S++V
Sbjct: 178 VNAIAPGYMATNNT---QALRADEDRNAAILERIPAGRWGTPDDIGGPAVFLASSASDYV 234

Query: 251 TGHDLVVDGGFLIR 264
            G+ L VDGG+L R
Sbjct: 235 NGYTLAVDGGWLAR 248

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score =  118 bits (297), Expect = 4e-32
 Identities = 77/250 (30%), Positives = 127/250 (50%), Gaps = 9/250 (3%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCD 71
            KV I+TGG+ GIG    R F ++GA+ +V     +  G+ + + +   G G C +V CD
Sbjct: 9   DKVVIVTGGSRGIGRGIVRAFVENGAK-VVFCARGEAAGQALESELNRAGPGSCKFVPCD 67

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT E  +K L+  TV+ +G++D + +NAG      QT  +     F  L  +N+      
Sbjct: 68  VTKEEDIKTLISVTVERFGRIDCLVNNAG-WHPPHQTTDETSAQEFRDLLNLNLISYFLA 126

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K+A   + +   +G+I+  +S+ GS G K+   Y  +K A+  + ++ +V    +G+RV
Sbjct: 127 SKYALPHLRK--SQGNIINLSSLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRV 184

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQ-TPLEGVVLRAGHVADAVLFLACRDSEFV 250
           NC+SP  + TPL         D +  + E +   L G +        A LFLA  ++ F 
Sbjct: 185 NCISPGNIWTPLWEELAAQTPDTLATIKEGELAQLLGRMGTEAESGLAALFLAA-EATFC 243

Query: 251 TGHDLVVDGG 260
           TG DL++ GG
Sbjct: 244 TGIDLLLSGG 253

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187635 cd08930, SDR_c8, classical (c) SDR, subgroup 8

 Score =  117 bits (295), Expect = 6e-32
 Identities = 67/261 (25%), Positives = 124/261 (47%), Gaps = 25/261 (9%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYVHC 70
           E K+ +ITG A  IG+   +     GAR+I +ADI      Q+   +      +   +  
Sbjct: 1   EDKIILITGAAGLIGKAFCKALLSAGARLI-LADINAPALEQLKEELTNLYKNRVIALEL 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAINVRGMA 129
           D+T++  +K L++S ++ +G++DI+ +NA        +   +  +  ++ +  +N+ G  
Sbjct: 60  DITSKESIKELIESYLEKFGRIDILINNAYPSPKVWGSRFEEFPYEQWNEVLNVNLGGAF 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR----------TDYHMSKHAVIGLVRS 179
            C +   ++  + G +GSI+  AS+ G      R           +Y + K  +I L + 
Sbjct: 120 LCSQAFIKLFKKQG-KGSIINIASIYGVIAPDFRIYENTQMYSPVEYSVIKAGIIHLTKY 178

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
            +      GIRVN +SP G+           P++ +EK    + PL+  +L    +  A+
Sbjct: 179 LAKYYADTGIRVNAISPGGILNN-------QPSEFLEKY-TKKCPLKR-MLNPEDLRGAI 229

Query: 240 LFLACRDSEFVTGHDLVVDGG 260
           +FL    S +VTG +LV+DGG
Sbjct: 230 IFLLSDASSYVTGQNLVIDGG 250

This subgroup has a fairly well conserved active site tetrad and domain size of the classical SDRs, but has an atypical NAD-binding motif ([ST]G[GA]XGXXG). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|184025 PRK13394, PRK13394, 3-hydroxybutyrate dehydrogenase; Provisional

 Score =  117 bits (294), Expect = 1e-31
 Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 12/260 (4%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
           + L GK A++TG ASGIG+  A   A  GA  + IAD+  +    VA  I    GK   V
Sbjct: 3   SNLNGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGV 61

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DVTNE  V A +D   + +G +DI+ SNAGI   +   + +  F+ + ++ AI+V G 
Sbjct: 62  AMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIVN--PIENYSFADWKKMQAIHVDGA 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               K A + M +    G ++   SV        ++ Y  +KH ++GL R  + +   H 
Sbjct: 120 FLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHN 179

Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           +R + V P  + TPL            G+  +EV K       ++GV      VA  VLF
Sbjct: 180 VRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDGVFTTVEDVAQTVLF 239

Query: 242 LACRDSEFVTGHDLVVDGGF 261
           L+   S  +TG   VV  G+
Sbjct: 240 LSSFPSAALTGQSFVVSHGW 259

Length = 262

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score =  117 bits (295), Expect = 1e-31
 Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 9/208 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L GKV  ITGGA GIG  TAR  A  GAR + I D+ + L ++ A  +  G       D
Sbjct: 2   DLRGKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAEL--GLVVGGPLD 58

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+     A +D+   + G +D++ +NAG++       LD   +   R+  +NV G+   
Sbjct: 59  VTDPASFAAFLDAVEADLGPIDVLVNNAGVMPVG--PFLDEPDAVTRRILDVNVYGVILG 116

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K AA  MV  G RG +V  AS+AG         Y  SKHAV+G   +A ++L   G+ V
Sbjct: 117 SKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHV 175

Query: 192 NCVSPHGLATPL---TCHAYGMPADEVE 216
           + V P  + T L   T  A G    E E
Sbjct: 176 SVVLPSFVNTELIAGTGGAKGFKNVEPE 203

Length = 273

>gnl|CDD|180822 PRK07069, PRK07069, short chain dehydrogenase; Validated

 Score =  116 bits (293), Expect = 1e-31
 Identities = 83/254 (32%), Positives = 118/254 (46%), Gaps = 19/254 (7%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ-VATSI----GVGKCHYVHCDV 72
           A ITG A G+G   AR  A+ GA++ +  DI D  G    A  I    G G       DV
Sbjct: 2   AFITGAAGGLGRAIARRMAEQGAKVFL-TDINDAAGLDAFAAEINAAHGEGVAFAAVQDV 60

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+E Q +AL+       G L ++ +NAG+   S   +  ++   + R+ AINV  +    
Sbjct: 61  TDEAQWQALLAQAADAMGGLSVLVNNAGV--GSFGAIEQIELDEWRRVMAINVESIFLGC 118

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           KHA   +       SIV  +SVA        T Y+ SK AV  L +S ++     G+ V 
Sbjct: 119 KHALPYLRASQP-ASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDVR 177

Query: 193 CVSPH------GLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
           C S H      G+  P+      +  +E  +      PL G +     VA AVL+LA  +
Sbjct: 178 CNSIHPTFIRTGIVDPIFQR---LGEEEATRKLARGVPL-GRLGEPDDVAHAVLYLASDE 233

Query: 247 SEFVTGHDLVVDGG 260
           S FVTG +LV+DGG
Sbjct: 234 SRFVTGAELVIDGG 247

Length = 251

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score =  116 bits (292), Expect = 2e-31
 Identities = 67/193 (34%), Positives = 95/193 (49%), Gaps = 6/193 (3%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVHCDVT 73
           KVAIITGGASGIG  TA+L    GA+ + I D  +  G   ++       K  +V CDVT
Sbjct: 1   KVAIITGGASGIGLATAKLLLKKGAK-VAILDRNENPGAAAELQAINPKVKATFVQCDVT 59

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +  Q+ A     ++ +G++DI+ +NAGIL              +++   +N+ G+     
Sbjct: 60  SWEQLAAAFKKAIEKFGRVDILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTY 119

Query: 134 HAARVM--VEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS-ASVQLGVHGIR 190
            A   M   +GG  G IV   SVAG     +   Y  SKH V+G  RS A +     G+R
Sbjct: 120 LALHYMDKNKGGKGGVIVNIGSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVR 179

Query: 191 VNCVSPHGLATPL 203
           VN + P    TPL
Sbjct: 180 VNAICPGFTNTPL 192

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score =  116 bits (291), Expect = 3e-31
 Identities = 79/256 (30%), Positives = 121/256 (47%), Gaps = 21/256 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           +L+GK AIITG  +GIG+  A  FA  GA  +V++DI  +    V   I    G+     
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACR 66

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CD+T+E ++ AL D  +   G++DI+ +NAG          D+  + F R + +NV    
Sbjct: 67  CDITSEQELSALADFALSKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFF 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +  A  M + G  G I+   S+A        T Y  SK A   LVR+ +  LG   I
Sbjct: 124 HLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 190 RVNCVSP-----HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           RVN ++P       L + +T         E+E+     TP+   + +   +A+A LFL  
Sbjct: 183 RVNGIAPGAILTDALKSVIT--------PEIEQKMLQHTPI-RRLGQPQDIANAALFLCS 233

Query: 245 RDSEFVTGHDLVVDGG 260
             + +V+G  L V GG
Sbjct: 234 PAASWVSGQILTVSGG 249

Length = 255

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score =  115 bits (291), Expect = 3e-31
 Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 21/228 (9%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTN 74
           + +ITGG SGIG   A  FA  GA+ +VI DI ++   + A ++    GK HY  CDV+ 
Sbjct: 1   IVLITGGGSGIGRLLALEFAKRGAK-VVILDINEKGAEETANNVRKAGGKVHYYKCDVSK 59

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +V        +  G + I+ +NAG++  S + +L+L     ++ F +N        K 
Sbjct: 60  REEVYEAAKKIKKEVGDVTILINNAGVV--SGKKLLELPDEEIEKTFEVNTLAHFWTTKA 117

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL---GVHGIRV 191
               M+E    G IV  ASVAG        DY  SK A +G   S  ++L   G  GI+ 
Sbjct: 118 FLPDMLERN-HGHIVTIASVAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKT 176

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
             V P+ + T +                +   PL   +L   +VA+ +
Sbjct: 177 TLVCPYFINTGMFQG------------VKTPRPLLAPILEPEYVAEKI 212

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score =  115 bits (289), Expect = 3e-31
 Identities = 85/255 (33%), Positives = 127/255 (49%), Gaps = 27/255 (10%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTN 74
           VAI+TGGA+GIG+  A   A  GA  +VIAD++ E    VA +I    G+   + C+VT+
Sbjct: 1   VAIVTGGAAGIGKAIAGTLAKAGAS-VVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTS 59

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV----RGMAA 130
           E  ++A+V +TV  +G + I+ +NAG         + +    F+  F +N+    R    
Sbjct: 60  EQDLEAVVKATVSQFGGITILVNNAG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQL 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C  H    M + G  G+I+  +S++      R   Y  SK AV  + R+ +  LG  GIR
Sbjct: 119 CAPH----MQKAG-GGAILNISSMSSENKNVRIAAYGSSKAAVNHMTRNLAFDLGPKGIR 173

Query: 191 VNCVSP-----HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           VN V+P       LA+ LT         E+E+     TPL G +     +A+A LFL   
Sbjct: 174 VNAVAPGAVKTDALASVLT--------PEIERAMLKHTPL-GRLGEPEDIANAALFLCSP 224

Query: 246 DSEFVTGHDLVVDGG 260
            S +V+G  L V GG
Sbjct: 225 ASAWVSGQVLTVSGG 239

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 6e-31
 Identities = 66/189 (34%), Positives = 105/189 (55%), Gaps = 8/189 (4%)

Query: 13  LEGKVAIITGGA-SGIGETTARLFADHGARMIVIADIQ----DELGRQVATSIGVGKCHY 67
           L GKV ++T  A +GIG  TAR   + GAR +VI+DI      E   ++A  +G+G+   
Sbjct: 15  LAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEA 73

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           V CDVT+E QV AL+D+ V+  G+LD++ +NAG+   +   V+D+    + R+  + + G
Sbjct: 74  VVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQTP--VVDMTDDEWSRVLDVTLTG 131

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                + A R M   G  G IV  ASV G      +  Y  +K  V+ L R ++++   +
Sbjct: 132 TFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEY 191

Query: 188 GIRVNCVSP 196
           G+R+N V+P
Sbjct: 192 GVRINAVAP 200

Length = 262

>gnl|CDD|235726 PRK06181, PRK06181, short chain dehydrogenase; Provisional

 Score =  115 bits (289), Expect = 8e-31
 Identities = 76/251 (30%), Positives = 114/251 (45%), Gaps = 33/251 (13%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHCDV 72
           GKV IITG + GIG   A   A  GA++++ A  +  L          G G+   V  DV
Sbjct: 1   GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHG-GEALVVPTDV 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAA 130
           ++    + L+++ V  +G +DI+ +NAGI   S  D+     D S F+R+  +N  G   
Sbjct: 60  SDAEACERLIEAAVARFGGIDILVNNAGITMWSRFDELT---DLSVFERVMRVNYLGAVY 116

Query: 131 CVKHA-----ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
           C   A     A        RG IV  +S+AG  G   R+ Y  SKHA+ G   S  ++L 
Sbjct: 117 CTHAALPHLKAS-------RGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELA 169

Query: 186 VHGIRVNCVSPHGLATPLTCHAY---GMPADEVEKLFEPQTPL-EGVVLRAGHVADAVLF 241
             G+ V  V P  +AT +   A    G P          ++P+ E  ++ A   A+A+L 
Sbjct: 170 DDGVAVTVVCPGFVATDIRKRALDGDGKPL--------GKSPMQESKIMSAEECAEAILP 221

Query: 242 -LACRDSEFVT 251
            +A R    V 
Sbjct: 222 AIARRKRLLVM 232

Length = 263

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score =  114 bits (286), Expect = 1e-30
 Identities = 76/249 (30%), Positives = 118/249 (47%), Gaps = 10/249 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           +V ++TG + G+G   AR FA  GAR++V      E    VA   G  +   +  DV + 
Sbjct: 1   QVVLVTGASRGLGAAIARSFAREGARVVVNYYRSTESAEAVAAEAG-ERAIAIQADVRDR 59

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSD----QTVLDLDFSAFDRLFAINVRGMAAC 131
            QV+A+++    ++G +D + +NA I    D    +T   +D+  + +     V+G    
Sbjct: 60  DQVQAMIEEAKNHFGPVDTIVNNALIDFPFDPDQRKTFDTIDWEDYQQQLEGAVKGALNL 119

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++       E G  G ++   +           DY  +K A++G  R+ + +LG +GI V
Sbjct: 120 LQAVLPDFKERG-SGRVINIGTNLFQNPVVPYHDYTTAKAALLGFTRNMAKELGPYGITV 178

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N VS  GL   +T  +   P  EV       TPL G V     +ADAVLF A   +  VT
Sbjct: 179 NMVSG-GL-LKVTDASAATP-KEVFDAIAQTTPL-GKVTTPQDIADAVLFFASPWARAVT 234

Query: 252 GHDLVVDGG 260
           G +LVVDGG
Sbjct: 235 GQNLVVDGG 243

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|236145 PRK08063, PRK08063, enoyl-(acyl carrier protein) reductase; Provisional

 Score =  113 bits (284), Expect = 2e-30
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 12/252 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
             GKVA++TG + GIG+  A   A+ G  + V      +   + A  I   G  K   V 
Sbjct: 2   FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGR-KALAVK 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            +V +  ++K +     + +G+LD+  +NA   S   +  ++L+ S +D    IN + + 
Sbjct: 61  ANVGDVEKIKEMFAQIDEEFGRLDVFVNNAA--SGVLRPAMELEESHWDWTMNINAKALL 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            C + AA++M + G  G I+  +S+      +  T   +SK A+  L R  +V+L   GI
Sbjct: 119 FCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGI 177

Query: 190 RVNCVSPHGLATPLTCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
            VN VS   + T    H    P  +E+ +    +TP  G ++    VA+AVLFL   +++
Sbjct: 178 AVNAVSGGAVDTDALKH---FPNREELLEDARAKTP-AGRMVEPEDVANAVLFLCSPEAD 233

Query: 249 FVTGHDLVVDGG 260
            + G  ++VDGG
Sbjct: 234 MIRGQTIIVDGG 245

Length = 250

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  113 bits (284), Expect = 3e-30
 Identities = 80/272 (29%), Positives = 132/272 (48%), Gaps = 44/272 (16%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVH 69
            L+GKVAI+TGG +G+G+  A   A  GA  I+I          R++    G  K  +V 
Sbjct: 12  SLDGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHGTNWDETRRLIEKEG-RKVTFVQ 69

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGI------LSSSD---QTVLDLDFSAFDRL 120
            D+T     + +V   ++ +G++DI+ +NAG       L   D     V+D++ ++   +
Sbjct: 70  VDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNS---V 126

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           + ++           A+VM + G  G I+  AS+    GGK    Y  SKH V GL ++ 
Sbjct: 127 YHLSQA--------VAKVMAKQG-SGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAF 177

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR--AGH---- 234
           + +L  + I+VN ++P  + T  T     + AD+           + ++ R  AG     
Sbjct: 178 ANELAAYNIQVNAIAPGYIKTANTAP---IRADKNRN--------DEILKRIPAGRWGEP 226

Query: 235 --VADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
             +  A +FLA R S++V GH L VDGG+L+R
Sbjct: 227 DDLMGAAVFLASRASDYVNGHILAVDGGWLVR 258

Length = 258

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score =  112 bits (283), Expect = 4e-30
 Identities = 77/254 (30%), Positives = 116/254 (45%), Gaps = 9/254 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L G+VA++TG A G+G   AR  A  GA ++V       L   VA     G     +  D
Sbjct: 9   LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFD 68

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           + +E  V A        +G+LDI+ +N G  +   + + +LD +A   L   ++      
Sbjct: 69  IADEEAVAAAFARIDAEHGRLDILVNNVG--ARDRRPLAELDDAAIRALLETDLVAPILL 126

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + AA+ M   G  G I+   S+AG         Y  +K  + GL+R+ + + G HGI  
Sbjct: 127 SRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITS 185

Query: 192 NCVSPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           N ++P   AT        M AD  V      +TPL G   R   +A A +FLA   + +V
Sbjct: 186 NAIAPGYFATETNA---AMAADPAVGPWLAQRTPL-GRWGRPEEIAGAAVFLASPAASYV 241

Query: 251 TGHDLVVDGGFLIR 264
            GH L VDGG+ + 
Sbjct: 242 NGHVLAVDGGYSVH 255

Length = 256

>gnl|CDD|187662 cd09761, A3DFK9-like_SDR_c, Clostridium thermocellum A3DFK9-like, a putative carbohydrate or polyalcohol metabolizing SDR, classical (c) SDRs

 Score =  112 bits (282), Expect = 4e-30
 Identities = 76/256 (29%), Positives = 122/256 (47%), Gaps = 23/256 (8%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
           GKVAI+TGG  GIG+     F + G + +V ADI +E G   A + G     +VH DV +
Sbjct: 1   GKVAIVTGGGHGIGKQICLDFLEAGDK-VVFADIDEERGADFAEAEGP-NLFFVHGDVAD 58

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
           E  VK +V + ++  G++D++ +NA   S     +  L    +DR+ ++N+ G     ++
Sbjct: 59  ETLVKFVVYAMLEKLGRIDVLVNNAARGSK--GILSSLLLEEWDRILSVNLTGPYELSRY 116

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
               +++    G I+  AS            Y  SK  ++ L  + ++ LG   IRVNC+
Sbjct: 117 CRDELIKNK--GRIINIASTRAFQSEPDSEAYAASKGGLVALTHALAMSLGPD-IRVNCI 173

Query: 195 SPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHV------ADAVLFLACRDSE 248
           SP  + T           ++ E    P T  +     AG V      A+ VLFL  +D+ 
Sbjct: 174 SPGWINT----------TEQQEFTAAPLTQEDHAQHPAGRVGTPKDIANLVLFLCQQDAG 223

Query: 249 FVTGHDLVVDGGFLIR 264
           F+TG   +VDGG   +
Sbjct: 224 FITGETFIVDGGMTKK 239

This subgroup includes a putative carbohydrate or polyalcohol metabolizing SDR (A3DFK9) from Clostridium thermocellum. Its members have a TGXXXGXG classical-SDR glycine-rich NAD-binding motif, and some have a canonical SDR active site tetrad (A3DFK9 lacks the upstream Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|187593 cd05332, 11beta-HSD1_like_SDR_c, 11beta-hydroxysteroid dehydrogenase type 1 (11beta-HSD1)-like, classical (c) SDRs

 Score =  113 bits (284), Expect = 4e-30
 Identities = 68/221 (30%), Positives = 99/221 (44%), Gaps = 21/221 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GKV IITG +SGIGE  A   A  GAR+++ A  ++ L    +    +G    H V  
Sbjct: 1   LQGKVVIITGASSGIGEELAYHLARLGARLVLSARREERLEEVKSECLELGAPSPHVVPL 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+++    + +V+  ++ +G LDI+ +NAGI  S      D       ++  +N  G  A
Sbjct: 61  DMSDLEDAEQVVEEALKLFGGLDILINNAGI--SMRSLFHDTSIDVDRKIMEVNYFGPVA 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K A   ++E   +GSIV  +S+AG  G   RT Y  SKHA+ G   S   +L    I 
Sbjct: 119 LTKAALPHLIERS-QGSIVVVSSIAGKIGVPFRTAYAASKHALQGFFDSLRAELSEPNIS 177

Query: 191 VNCVSP----------------HGLATPLTCHAYGMPADEV 215
           V  V P                   A      A GM  +E 
Sbjct: 178 VTVVCPGLIDTNIAMNALSGDGSMSAKMDDTTANGMSPEEC 218

Human 11beta_HSD1 catalyzes the NADP(H)-dependent interconversion of cortisone and cortisol. This subgroup also includes human dehydrogenase/reductase SDR family member 7C (DHRS7C) and DHRS7B. These proteins have the GxxxGxG nucleotide binding motif and S-Y-K catalytic triad characteristic of the SDRs, but have an atypical C-terminal domain that contributes to homodimerization contacts. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score =  112 bits (282), Expect = 7e-30
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 11/252 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHC 70
           LEGKV +ITGG++G+G   A  F    A++++     +E    VA  I    G+   V  
Sbjct: 5   LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKG 64

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  L+ + V+ +G LD+M +NAGI ++     + L+   ++++   N+ G   
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLE--DWNKVINTNLTGAFL 122

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+I+  +SV           Y  SK  V  +  + +++    GIR
Sbjct: 123 GSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIR 182

Query: 191 VNCVSPHGLATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           VN + P  + TP+    +  P    +VE +     P+ G + +   +A    +LA  ++ 
Sbjct: 183 VNNIGPGAINTPINAEKFADPKQRADVESMI----PM-GYIGKPEEIAAVAAWLASSEAS 237

Query: 249 FVTGHDLVVDGG 260
           +VTG  L  DGG
Sbjct: 238 YVTGITLFADGG 249

Length = 261

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score =  112 bits (281), Expect = 1e-29
 Identities = 71/249 (28%), Positives = 108/249 (43%), Gaps = 28/249 (11%)

Query: 20  ITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQ 77
           ITG ASG+G   A  +A  G R + +AD+ +E G +    +    G   Y  CDV +  Q
Sbjct: 5   ITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQ 63

Query: 78  VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
           + AL  +  + +G +D++ +NAG+ S       +L    +D   AIN+ G+    K    
Sbjct: 64  LTALAQACEEKWGGIDVIVNNAGVASGG--FFEELSLEDWDWQIAINLMGVVKGCKAFLP 121

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH 197
           +       G IV  AS+AG   G   + Y+++K  V+ L  +  V+L    I V+ V P 
Sbjct: 122 LFKRQKS-GRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPS 180

Query: 198 GLATPLTCHAYG-MPADE--VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD 254
              T L     G  PA +  V KL       E   + A  +AD +             + 
Sbjct: 181 FFQTNLLDSFRGPNPAMKAQVGKLL------EKSPITAADIADYI-------------YQ 221

Query: 255 LVVDGGFLI 263
            V  G FLI
Sbjct: 222 QVAKGEFLI 230

Length = 270

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  111 bits (280), Expect = 1e-29
 Identities = 79/259 (30%), Positives = 134/259 (51%), Gaps = 20/259 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHC 70
            L+ KV +ITGGA G+G   A   A  GA++ +I   Q++L   VA    +G +      
Sbjct: 2   DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAA 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILS------SSDQTVLD-LDFSAFDRLFAI 123
           +VT+E  V+A      +++GQL+ + +NAGIL       + D  V   +    F  +  +
Sbjct: 62  NVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDV 121

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASV--AGSCGGKRRTDYHMSKHAVIGLVRSAS 181
           N+ G+  C + AA  M+E G +G I+  +S+  AG+ G   +T+Y  SK  V  +  + +
Sbjct: 122 NLTGVFLCGREAAAKMIESGSKGVIINISSIARAGNMG---QTNYSASKAGVAAMTVTWA 178

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
            +L  +GIRV  ++P  + T +T     M  + +E+L E   P+ G +     +A  V F
Sbjct: 179 KELARYGIRVAAIAPGVIETEMTA---AMKPEALERL-EKMIPV-GRLGEPEEIAHTVRF 233

Query: 242 LACRDSEFVTGHDLVVDGG 260
           +   ++++VTG  L +DGG
Sbjct: 234 II--ENDYVTGRVLEIDGG 250

Length = 253

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score =  111 bits (280), Expect = 1e-29
 Identities = 86/263 (32%), Positives = 117/263 (44%), Gaps = 16/263 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L+G+VA+ITGG SG+G      F   GA++ V+ D   E   ++    G      V  D
Sbjct: 1   WLKGEVALITGGGSGLGRALVERFVAEGAKVAVL-DRSAEKVAELRADFG-DAVVGVEGD 58

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGI---LSSSDQTVLDLDFSAFDRLFAINVRGM 128
           V +    +  V   V+ +G+LD    NAGI    +S      +    AFD LF INV+G 
Sbjct: 59  VRSLADNERAVARCVERFGKLDCFIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGY 118

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               K A   +      GS++ T S AG   G     Y  SKHAV+GLV+  + +L  H 
Sbjct: 119 ILGAKAALPALYAT--EGSVIFTVSNAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH- 175

Query: 189 IRVNCVSPHGLATPLTCHA-YGMPADEVEKLFEPQ-----TPLEGVVLRAGHVADAVLFL 242
           IRVN V+P G+ T L   A  G     +             PL G          A +FL
Sbjct: 176 IRVNGVAPGGMVTDLRGPASLGQGETSISTPPLDDMLKSILPL-GFAPEPEDYTGAYVFL 234

Query: 243 ACR-DSEFVTGHDLVVDGGFLIR 264
           A R D+   TG  +  DGG  +R
Sbjct: 235 ASRGDNRPATGTVINYDGGMGVR 257

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score =  110 bits (277), Expect = 3e-29
 Identities = 75/257 (29%), Positives = 118/257 (45%), Gaps = 18/257 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY-VHCD 71
           LEGK A++TGG  GIG       A  GA +   A  Q EL   +      G       CD
Sbjct: 4   LEGKTALVTGGTKGIGYAIVEELAGLGAEVYTCARNQKELDECLTEWREKGFKVEGSVCD 63

Query: 72  VTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINVRGM 128
           V++  + + L+D+   ++ G+L+I+ +NAG     +      D++   +  + + N    
Sbjct: 64  VSSRSERQELMDTVASHFGGKLNILVNNAGTNIRKEAK----DYTEEDYSLIMSTNFEAA 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               + A  ++   G  G+IV  +SVAG         Y  +K A+  L RS + +     
Sbjct: 120 YHLSRLAHPLLKASG-NGNIVFISSVAGVIAVPSGAPYGATKGALNQLTRSLACEWAKDN 178

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           IRVN V+P  +ATPL         + ++K+ E +TPL+    R G    VA  V FL   
Sbjct: 179 IRVNAVAPWVIATPLVEPVIQQK-ENLDKVIE-RTPLK----RFGEPEEVAALVAFLCMP 232

Query: 246 DSEFVTGHDLVVDGGFL 262
            + ++TG  + VDGG  
Sbjct: 233 AASYITGQIIAVDGGLT 249

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score =  109 bits (275), Expect = 5e-29
 Identities = 87/250 (34%), Positives = 124/250 (49%), Gaps = 10/250 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           KV +ITG + GIG  TA L A  G  + +          + A ++    G+   V  DV 
Sbjct: 3   KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVA 62

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           NE  V A+ D+    +G+LD + +NAGI++ S   + D+D +   R+F  NV G   C +
Sbjct: 63  NEADVIAMFDAVQSAFGRLDALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAR 121

Query: 134 HAARVMV--EGGVRGSIVCTASVAGSCGGKRR-TDYHMSKHAVIGLVRSASVQLGVHGIR 190
            AAR +    GG  G+IV  +S+A   G      DY  SK AV  L    + +LG HG+R
Sbjct: 122 EAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGVR 181

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V P  + T +  HA G       +L   QTPL G    A  VA+ +++L    + +V
Sbjct: 182 VNAVRPGLIETEI--HASGGQPGRAARL-GAQTPL-GRAGEADEVAETIVWLLSDAASYV 237

Query: 251 TGHDLVVDGG 260
           TG  L V GG
Sbjct: 238 TGALLDVGGG 247

Length = 248

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score =  108 bits (271), Expect = 2e-28
 Identities = 79/256 (30%), Positives = 130/256 (50%), Gaps = 14/256 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L GKVAIITG  +G+G+  A   A  GA ++ +   +    +    ++G  K H++  D+
Sbjct: 6   LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGR-KFHFITADL 64

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
             +  + ++V   V+  G +DI+ +NAGI+   D  +L+     +D +  IN + +    
Sbjct: 65  IQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQD--LLEFGNKDWDDVININQKTVFFLS 122

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  A+  V+ G  G I+  AS+    GG R   Y  SK AV+GL R+ + +L  + I VN
Sbjct: 123 QAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVN 182

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV-VLRAG---HVADAVLFLACRDSE 248
            ++P  +AT  T     + AD        +  LE +   R G    +A   +FL+   S+
Sbjct: 183 AIAPGYMATDNTA---ALRADTARN----EAILERIPASRWGTPDDLAGPAIFLSSSASD 235

Query: 249 FVTGHDLVVDGGFLIR 264
           +VTG+ L VDGG+L R
Sbjct: 236 YVTGYTLAVDGGWLAR 251

Length = 251

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 2e-28
 Identities = 87/254 (34%), Positives = 125/254 (49%), Gaps = 17/254 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L  KVAI+TG + GIG   AR  A  G  + V          ++   I    G+   V  
Sbjct: 3   LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQA 62

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +   V  L D+    +G++D++ +NAG++     T+ D D   FDR  A N+RG   
Sbjct: 63  DVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPLG--TIADFDLEDFDRTIATNLRGAFV 120

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ AAR + +GG R   + T+ +A    G     Y  SK AV GLV   + +L   GI 
Sbjct: 121 VLREAARHLGQGG-RIINLSTSVIALPLPGY--GPYAASKAAVEGLVHVLANELRGRGIT 177

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VN V+P  +AT L  +  G  A+++++L     PLE    R G    +A AV FLA  D 
Sbjct: 178 VNAVAPGPVATELFFN--GKSAEQIDQL-AGLAPLE----RLGTPEEIAAAVAFLAGPDG 230

Query: 248 EFVTGHDLVVDGGF 261
            +V G  L V+GGF
Sbjct: 231 AWVNGQVLRVNGGF 244

Length = 245

>gnl|CDD|187640 cd08935, mannonate_red_SDR_c, putative D-mannonate oxidoreductase, classical (c) SDR

 Score =  108 bits (271), Expect = 3e-28
 Identities = 73/272 (26%), Positives = 121/272 (44%), Gaps = 29/272 (10%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+ KVA+ITGG   +G   AR  A  GA++  +   Q++  +     T++G G+   +  
Sbjct: 3   LKNKVAVITGGTGVLGGAMARALAQAGAKVAALGRNQEKGDKVAKEITALG-GRAIALAA 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAG------------ILSSSDQTVLDLDFSAFD 118
           DV +   ++   +  V  +G +DI+ + AG                ++Q   DLD   ++
Sbjct: 62  DVLDRASLERAREEIVAQFGTVDILINGAGGNHPDATTDPEHYEPETEQNFFDLDEEGWE 121

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
            +F +N+ G     +   + M+E    GSI+  +S+       +   Y  +K AV    +
Sbjct: 122 FVFDLNLNGSFLPSQVFGKDMLEQK-GGSIINISSMNAFSPLTKVPAYSAAKAAVSNFTQ 180

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAY----GMPADEVEKLFEPQTPLEGVVLRAGH 234
             +V+    G+RVN ++P    TP          G   D   K+   +TP+     R G 
Sbjct: 181 WLAVEFATTGVRVNAIAPGFFVTPQNRKLLINPDGSYTDRSNKILG-RTPMG----RFGK 235

Query: 235 VAD---AVLFLACRD-SEFVTGHDLVVDGGFL 262
             +   A+LFLA    S FVTG  + VDGGF 
Sbjct: 236 PEELLGALLFLASEKASSFVTGVVIPVDGGFS 267

D-mannonate oxidoreductase catalyzes the NAD-dependent interconversion of D-mannonate and D-fructuronate. This subgroup includes Bacillus subtitils UxuB/YjmF, a putative D-mannonate oxidoreductase; the B. subtilis UxuB gene is part of a putative ten-gene operon (the Yjm operon) involved in hexuronate catabolism. Escherichia coli UxuB does not belong to this subgroup. This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 271

>gnl|CDD|181131 PRK07814, PRK07814, short chain dehydrogenase; Provisional

 Score =  107 bits (270), Expect = 4e-28
 Identities = 73/254 (28%), Positives = 116/254 (45%), Gaps = 15/254 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVG-KCHYVH 69
           +L+ +VA++TG   G+G   A  FA+ GA +++ A  + +L  +VA  I   G + H V 
Sbjct: 7   RLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQL-DEVAEQIRAAGRRAHVVA 65

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+ +      L    V+ +G+LDI+ +N G   +    +L          F  NV    
Sbjct: 66  ADLAHPEATAGLAGQAVEAFGRLDIVVNNVG--GTMPNPLLSTSTKDLADAFTFNVATAH 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
           A    A  +M+E    GS++  +S  G   G+    Y  +K A+    R A++ L    I
Sbjct: 124 ALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCPR-I 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
           RVN ++P  + T  +        DE+    E  TPL     R G    +A A ++LA   
Sbjct: 183 RVNAIAPGSILT--SALEVVAANDELRAPMEKATPLR----RLGDPEDIAAAAVYLASPA 236

Query: 247 SEFVTGHDLVVDGG 260
             ++TG  L VDGG
Sbjct: 237 GSYLTGKTLEVDGG 250

Length = 263

>gnl|CDD|181518 PRK08643, PRK08643, acetoin reductase; Validated

 Score =  107 bits (268), Expect = 6e-28
 Identities = 79/257 (30%), Positives = 121/257 (47%), Gaps = 15/257 (5%)

Query: 14  EGKVAIITGGASGIGETTA-RLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHC 70
             KVA++TG   GIG   A RL  D     + I D  +E  +  A  +    GK   V  
Sbjct: 1   MSKVALVTGAGQGIGFAIAKRLVEDGFK--VAIVDYNEETAQAAADKLSKDGGKAIAVKA 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++  QV A V   V  +G L+++ +NAG+  ++   +  +    FD+++ INV G+  
Sbjct: 59  DVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPTT--PIETITEEQFDKVYNINVGGVIW 116

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ A     + G  G I+   S AG  G      Y  +K AV GL ++A+  L   GI 
Sbjct: 117 GIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGIT 176

Query: 191 VNCVSPHGLATPL-------TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           VN  +P  + TP+            G P +   + F     L G +     VA+ V FLA
Sbjct: 177 VNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITL-GRLSEPEDVANCVSFLA 235

Query: 244 CRDSEFVTGHDLVVDGG 260
             DS+++TG  ++VDGG
Sbjct: 236 GPDSDYITGQTIIVDGG 252

Length = 256

>gnl|CDD|213929 TIGR04316, dhbA_paeA, 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase

 Score =  105 bits (265), Expect = 2e-27
 Identities = 71/252 (28%), Positives = 109/252 (43%), Gaps = 15/252 (5%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC---DVTN 74
            ++TG A GIG   AR  A+ GAR+  + D   E   ++   +     +       DV +
Sbjct: 1   VLVTGAAQGIGYAVARALAEAGARVAAV-DRNFEQLLELVADLR-RYGYPFATYKLDVAD 58

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
              V  +V    + YG +D++ + AGIL      +  L    +   FA+N  G+    + 
Sbjct: 59  SAAVDEVVQRLEREYGPIDVLVNVAGILRLGA--IDSLSDEDWQATFAVNTFGVFNVSQA 116

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
            +  M      G+IV   S A +        Y  SK A+  L +   ++L  +GIR N V
Sbjct: 117 VSPRMKRRR-SGAIVTVGSNAANVPRMGMAAYAASKAALTMLTKCLGLELAPYGIRCNVV 175

Query: 195 SPHGLATPLTCHAYGMPADEVE------KLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           SP    T +    +     E +      + F    PL G +     +A+AVLFLA   + 
Sbjct: 176 SPGSTDTEMQRQLWNDEYGEQQVIAGSPEQFRLGIPL-GKIAEPSDIANAVLFLASDLAS 234

Query: 249 FVTGHDLVVDGG 260
            +T HDLVVDGG
Sbjct: 235 HITMHDLVVDGG 246

Members of this family are 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase (EC 1.3.1.28), the third enzyme in the biosynthesis of 2,3-dihydroxybenzoic acid (DHB) from chorismate. The first two enzymes are isochorismate synthase (EC 5.4.4.2) and isochorismatase (EC 3.3.2.1). Synthesis is often followed by adenylation by the enzyme DHBA-AMP ligase (EC 2.7.7.58) to activate (DHB) for a non-ribosomal peptide synthetase. Length = 250

>gnl|CDD|187609 cd05351, XR_like_SDR_c, xylulose reductase-like, classical (c) SDRs

 Score =  105 bits (264), Expect = 2e-27
 Identities = 81/251 (32%), Positives = 125/251 (49%), Gaps = 14/251 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
             GK A++TG   GIG  T +  A  GAR++ ++  Q +L   V    G+     V  D+
Sbjct: 5   FAGKRALVTGAGKGIGRATVKALAKAGARVVAVSRTQADLDSLVRECPGI---EPVCVDL 61

Query: 73  T-NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +  +   +AL      + G +D++ +NA +  +  Q  L++   AFDR F +NVR +   
Sbjct: 62  SDWDATEEALG-----SVGPVDLLVNNAAV--AILQPFLEVTKEAFDRSFDVNVRAVIHV 114

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +  AR M+  GV GSIV  +S A        T Y  +K A+  L +  +++LG H IRV
Sbjct: 115 SQIVARGMIARGVPGSIVNVSSQASQRALTNHTVYCSTKAALDMLTKVMALELGPHKIRV 174

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +    +  P ++ +K+   + PL G       V +A+LFL    S   T
Sbjct: 175 NSVNPTVVMTDMGRDNWSDP-EKAKKMLN-RIPL-GKFAEVEDVVNAILFLLSDKSSMTT 231

Query: 252 GHDLVVDGGFL 262
           G  L VDGGFL
Sbjct: 232 GSTLPVDGGFL 242

Members of this subgroup include proteins identified as L-xylulose reductase (XR) and carbonyl reductase; they are members of the SDR family. XR, catalyzes the NADP-dependent reduction of L-xyulose and other sugars. Tetrameric mouse carbonyl reductase is involved in the metabolism of biogenic and xenobiotic carbonyl compounds. This subgroup also includes tetrameric chicken liver D-erythrulose reductase, which catalyzes the reduction of D-erythrulose to D-threitol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 244

>gnl|CDD|187644 cd08940, HBDH_SDR_c, d-3-hydroxybutyrate dehydrogenase (HBDH), classical (c) SDRs

 Score =  105 bits (265), Expect = 2e-27
 Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 21/264 (7%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIV-----IADIQDELGRQVATSIGVGKCHYVH 69
           GKVA++TG  SGIG   AR  A  GA +++      A+I+       A   GV K  Y  
Sbjct: 2   GKVALVTGSTSGIGLGIARALAAAGANIVLNGFGDAAEIEAVRAGLAAKH-GV-KVLYHG 59

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D++    ++ +V    + +G +DI+ +NAGI   +   + D     +D + A+N+  + 
Sbjct: 60  ADLSKPAAIEDMVAYAQRQFGGVDILVNNAGIQHVA--PIEDFPTEKWDAIIALNLSAVF 117

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A   M + G  G I+  ASV G      ++ Y  +KH V+GL +  +++    G+
Sbjct: 118 HTTRLALPHMKKQGW-GRIINIASVHGLVASANKSAYVAAKHGVVGLTKVVALETAGTGV 176

Query: 190 RVNCVSPHGLATPLT-------CHAYGMPADEV--EKLFEPQTPLEGVVLRAGHVADAVL 240
             N + P  + TPL            G+P ++   E L E Q   +   +    + D  +
Sbjct: 177 TCNAICPGWVLTPLVEKQISALAQKNGVPQEQAARELLLEKQPSKQ--FVTPEQLGDTAV 234

Query: 241 FLACRDSEFVTGHDLVVDGGFLIR 264
           FLA   +  +TG  + VDGG+  +
Sbjct: 235 FLASDAASQITGTAVSVDGGWTAQ 258

DHBDH, an NAD+ -dependent enzyme, catalyzes the interconversion of D-3-hydroxybutyrate and acetoacetate. It is a classical SDR, with the canonical NAD-binding motif and active site tetrad. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score =  105 bits (265), Expect = 2e-27
 Identities = 73/223 (32%), Positives = 102/223 (45%), Gaps = 14/223 (6%)

Query: 20  ITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV- 78
           ITG ASGIG  TA LFA  G R +   DI +     +A  +G G       DVT+     
Sbjct: 6   ITGAASGIGRATALLFAAEGWR-VGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWD 64

Query: 79  KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV 138
            AL D      G+LD++F+NAGIL        D+   A DR+  INV+G+     HAA  
Sbjct: 65  AALADFAAATGGRLDVLFNNAGILRGGPFE--DIPLEAHDRVIDINVKGVLNGA-HAALP 121

Query: 139 MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG 198
            ++      ++ T+S +   G      Y  +K AV GL  +  ++   HGIRV  V P  
Sbjct: 122 YLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLF 181

Query: 199 LATP-LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
           + T  L   +  + A   ++L        GV L    VA+AV 
Sbjct: 182 VDTAMLDGTSNEVDAGSTKRL--------GVRLTPEDVAEAVW 216

Length = 260

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score =  105 bits (263), Expect = 2e-27
 Identities = 69/255 (27%), Positives = 127/255 (49%), Gaps = 17/255 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           +L GKVAI+TGGA GIG+      A  GA++++  +   E    +   +G      + V 
Sbjct: 3   QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQ 62

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV+       LV+  V ++G++DI+ +NAGI  + D+T   L+   ++R+  +N+  + 
Sbjct: 63  ADVSKVEDANRLVEEAVNHFGKVDILVNNAGI--TRDRTFKKLNREDWERVIDVNLSSVF 120

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
                    + E    G I+  +S+ G  GG  +T+Y  +K  ++G  +S +++L    +
Sbjct: 121 NTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNV 179

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
            VN + P  + T +      +P +  +K+   + P +    R G    +A  V++L CRD
Sbjct: 180 TVNAICPGFIDTEMVAE---VPEEVRQKIV-AKIPKK----RFGQADEIAKGVVYL-CRD 230

Query: 247 SEFVTGHDLVVDGGF 261
             ++TG  L ++GG 
Sbjct: 231 GAYITGQQLNINGGL 245

Length = 247

>gnl|CDD|132250 TIGR03206, benzo_BadH, 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

 Score =  105 bits (263), Expect = 3e-27
 Identities = 82/255 (32%), Positives = 118/255 (46%), Gaps = 13/255 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+ K AI+TGG  GIG  T R FA+ GA++ V  D+  E   +VA  I    G      C
Sbjct: 1   LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVF-DLNREAAEKVAADIRAKGGNAQAFAC 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+T+   V   V +  Q  G +D++ +NAG            +   ++RL AIN+ G A 
Sbjct: 60  DITDRDSVDTAVAAAEQALGPVDVLVNNAGW--DKFGPFTKTEPPLWERLIAINLTG-AL 116

Query: 131 CVKHA-ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            + HA    MVE G  G IV  AS A   G      Y   K  ++   ++ + +   HGI
Sbjct: 117 HMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGI 175

Query: 190 RVNCVSPHGLATPL---TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            VN V P    T L    C     P +++ + F    PL G + +   +  A+LF +  D
Sbjct: 176 TVNVVCPGPTDTALLDDICGGAENP-EKLREAFTRAIPL-GRLGQPDDLPGAILFFSSDD 233

Query: 247 SEFVTGHDLVVDGGF 261
           + F+TG  L V GG 
Sbjct: 234 ASFITGQVLSVSGGL 248

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. Length = 250

>gnl|CDD|187639 cd08934, CAD_SDR_c, clavulanic acid dehydrogenase (CAD), classical (c) SDR

 Score =  104 bits (262), Expect = 4e-27
 Identities = 74/233 (31%), Positives = 111/233 (47%), Gaps = 14/233 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYVH 69
           L+GKVA++TG +SGIGE TAR  A  GA + + A   D  + L  ++      GK   + 
Sbjct: 1   LQGKVALVTGASSGIGEATARALAAEGAAVAIAARRVDRLEALADELEAE--GGKALVLE 58

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVT+E QV A V+ TV+  G+LDI+ +NAGI+      V D D + + R+   N+ G+ 
Sbjct: 59  LDVTDEQQVDAAVERTVEALGRLDILVNNAGIMLLG--PVEDADTTDWTRMIDTNLLGLM 116

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
               HAA        +G+IV  +SVAG    +    Y+ +K  V         ++   G+
Sbjct: 117 Y-TTHAALPHHLLRNKGTIVNISSVAGRVAVRNSAVYNATKFGVNAFSEGLRQEVTERGV 175

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVADAVLF 241
           RV  + P  + T L  H       E  E+       L+     A  +A AV +
Sbjct: 176 RVVVIEPGTVDTELRDHITHTITKEAYEERISTIRKLQ-----AEDIAAAVRY 223

CAD catalyzes the NADP-dependent reduction of clavulanate-9-aldehyde to clavulanic acid, a beta-lactamase inhibitor. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|236190 PRK08220, PRK08220, 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

 Score =  104 bits (261), Expect = 8e-27
 Identities = 72/263 (27%), Positives = 103/263 (39%), Gaps = 36/263 (13%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA-DIQ--DELGRQVATSIGVGKCHYVH 69
             GK   +TG A GIG   A  F + GA+  VI  D     +     AT           
Sbjct: 6   FSGKTVWVTGAAQGIGYAVALAFVEAGAK--VIGFDQAFLTQEDYPFAT---------FV 54

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV++   V  +    +   G LD++ + AGIL       L  +   + + FA+N  G  
Sbjct: 55  LDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDE--DWQQTFAVNAGGAF 112

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +            G+IV   S A          Y  SK A+  L +   ++L  +G+
Sbjct: 113 NLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGV 171

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT------------PLEGVVLRAGHVAD 237
           R N VSP    T +      +  DE     E Q             PL G + R   +A+
Sbjct: 172 RCNVVSPGSTDTDMQ---RTLWVDEDG---EQQVIAGFPEQFKLGIPL-GKIARPQEIAN 224

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
           AVLFLA   +  +T  D+VVDGG
Sbjct: 225 AVLFLASDLASHITLQDIVVDGG 247

Length = 252

>gnl|CDD|180300 PRK05875, PRK05875, short chain dehydrogenase; Provisional

 Score =  104 bits (261), Expect = 1e-26
 Identities = 80/258 (31%), Positives = 125/258 (48%), Gaps = 14/258 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR---QVATSIGVGKCHYVH 69
            + +  ++TGG SGIG+  A      GA ++++    D+L     ++    G G   Y  
Sbjct: 5   FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEP 64

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVT+E QV   VD+    +G+L  +   AG  S +   +  +D  A+ R   +NV G  
Sbjct: 65  ADVTDEDQVARAVDAATAWHGRLHGVVHCAG-GSETIGPITQIDSDAWRRTVDLNVNGTM 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +KHAAR +V GG  GS V  +S+A S   +    Y ++K AV  L++ A+ +LG   +
Sbjct: 124 YVLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWV 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV---LFLACRD 246
           RVN + P  + T L       P  E+   +   TPL     R G V D     +FL    
Sbjct: 183 RVNSIRPGLIRTDLVAPITESP--ELSADYRACTPLP----RVGEVEDVANLAMFLLSDA 236

Query: 247 SEFVTGHDLVVDGGFLIR 264
           + ++TG  + VDGG ++R
Sbjct: 237 ASWITGQVINVDGGHMLR 254

Length = 276

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score =  103 bits (258), Expect = 1e-26
 Identities = 56/194 (28%), Positives = 85/194 (43%), Gaps = 10/194 (5%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG------KCHYV 68
           GK  +ITGG+SGIG+  A+     GA +I++A  + +L  +    I         K  Y+
Sbjct: 1   GKHVLITGGSSGIGKALAKELVKEGANVIIVARSESKL-EEAVEEIEAEANASGQKVSYI 59

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+++  +V+      V+  G  D++ + AGI         DL    F+R   +N  G 
Sbjct: 60  SADLSDYEEVEQAFAQAVEKGGPPDLVVNCAGISIPGL--FEDLTAEEFERGMDVNYFGS 117

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
                    +M E    G IV  +S A   G    + Y  SK A+ GL  S   +L  + 
Sbjct: 118 LNVAHAVLPLMKEQR-PGHIVFVSSQAALVGIYGYSAYCPSKFALRGLAESLRQELKPYN 176

Query: 189 IRVNCVSPHGLATP 202
           IRV+ V P    TP
Sbjct: 177 IRVSVVYPPDTDTP 190

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|235693 PRK06077, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  102 bits (257), Expect = 2e-26
 Identities = 75/261 (28%), Positives = 118/261 (45%), Gaps = 25/261 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQV------ATSIGVGKCH 66
           L+ KV ++TG   GIG   A   A  G+ ++V A  + E   +           G+G   
Sbjct: 4   LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIG--- 60

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            V  DV+     + L  +T+  YG  DI+ +NAG+   S    L++D    D+  + + +
Sbjct: 61  -VLADVSTREGCETLAKATIDRYGVADILVNNAGLGLFS--PFLNVDDKLIDKHISTDFK 117

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            +  C +  A+ M EG   G+IV  ASVAG       + Y   K AVI L +  +++L  
Sbjct: 118 SVIYCSQELAKEMREG---GAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP 174

Query: 187 HGIRVNCVSPHGLATPLTCHAY---GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
             IRVN ++P  + T L    +   GM   E    F  +  L G +L    VA+ V  + 
Sbjct: 175 K-IRVNAIAPGFVKTKLGESLFKVLGMSEKE----FAEKFTLMGKILDPEEVAEFVAAIL 229

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
               E +TG   V+D G  ++
Sbjct: 230 --KIESITGQVFVLDSGESLK 248

Length = 252

>gnl|CDD|187596 cd05337, BKR_1_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 1, classical (c) SDR

 Score =  101 bits (253), Expect = 8e-26
 Identities = 77/260 (29%), Positives = 115/260 (44%), Gaps = 21/260 (8%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVG-KCHYVHCDVTN 74
           VAI+TG + GIG   A   A  G  + +     D+     VA  +  G +  Y   D+  
Sbjct: 3   VAIVTGASRGIGRAIATELAARGFDIAINDLPDDDQATEVVAEVLAAGRRAIYFQADIGE 62

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
               +AL+D   +++G+LD + +NAGI       +LDL   +FDRL AIN+RG     + 
Sbjct: 63  LSDHEALLDQAWEDFGRLDCLVNNAGIAVRPRGDLLDLTEDSFDRLIAINLRGPFFLTQA 122

Query: 135 AARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            AR MVE      G   SI+   S+        R +Y +SK  +    R  + +L   GI
Sbjct: 123 VARRMVEQPDRFDGPHRSIIFVTSINAYLVSPNRGEYCISKAGLSMATRLLAYRLADEGI 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEV--EKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
            V+ + P  + T +T      P  E   E +     P+     R G    +A AV  LA 
Sbjct: 183 AVHEIRPGLIHTDMT-----APVKEKYDELIAAGLVPIR----RWGQPEDIAKAVRTLAS 233

Query: 245 RDSEFVTGHDLVVDGGFLIR 264
               + TG  + +DGG  +R
Sbjct: 234 GLLPYSTGQPINIDGGLSMR 253

This subgroup includes Escherichia coli CFT073 FabG. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 255

>gnl|CDD|181508 PRK08628, PRK08628, short chain dehydrogenase; Provisional

 Score =  101 bits (254), Expect = 8e-26
 Identities = 72/258 (27%), Positives = 111/258 (43%), Gaps = 19/258 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIA--DIQDELGRQVATSIGVGKCHYVH 69
            L+ KV I+TGGASGIG   +   A+ GA  ++       DE   ++       +   V 
Sbjct: 4   NLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQV- 62

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+T++ Q +  V+ TV  +G++D + +NAG+   +D   L+    AF      N+    
Sbjct: 63  -DLTDDAQCRDAVEQTVAKFGRIDGLVNNAGV---NDGVGLEAGREAFVASLERNLIHYY 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
               +    +     RG+IV  +S     G    + Y  +K A + L R  +V L   G+
Sbjct: 119 VMAHYCLPHLKAS--RGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGV 176

Query: 190 RVNCVSPHGLATPLTCHAY-----GMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           RVN V P  + TPL    Y          +        + PL   +  A  +AD  +FL 
Sbjct: 177 RVNAVIPAEVMTPL----YENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLL 232

Query: 244 CRDSEFVTGHDLVVDGGF 261
              S   TG  L VDGG+
Sbjct: 233 SERSSHTTGQWLFVDGGY 250

Length = 258

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score =  101 bits (252), Expect = 1e-25
 Identities = 82/265 (30%), Positives = 123/265 (46%), Gaps = 40/265 (15%)

Query: 16  KVAIITGGASGIGETTARLFADHG------------ARMIVIADIQDELGRQVATSIGVG 63
           KV IITG + GIG  TA L A+ G            A   V+  I+ + G  +A      
Sbjct: 3   KVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALA------ 56

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD-LDFSAFDRLFA 122
               V  DV +E  V  L ++  +  G+LD + +NAGIL +  Q  L+ +D +   R+FA
Sbjct: 57  ----VAADVADEADVLRLFEAVDRELGRLDALVNNAGILEA--QMRLEQMDAARLTRIFA 110

Query: 123 INVRGMAACVKHAARVMV--EGGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRS 179
            NV G   C + A + M    GG  G+IV  +S+A   G      DY  SK A+  +   
Sbjct: 111 TNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIG 170

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG----HV 235
            + ++   GIRVN V P  + T +  HA G     V+++        G+ +  G     V
Sbjct: 171 LAKEVAAEGIRVNAVRPGVIYTEI--HASGGEPGRVDRV------KAGIPMGRGGTAEEV 222

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGG 260
           A A+L+L   ++ + TG  + V GG
Sbjct: 223 ARAILWLLSDEASYTTGTFIDVSGG 247

Length = 248

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score =  100 bits (251), Expect = 2e-25
 Identities = 77/261 (29%), Positives = 118/261 (45%), Gaps = 25/261 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG--KCHYVHC 70
           L GK  +ITG A GIG   A   A++GA  I+I DI  E        +     K H    
Sbjct: 7   LAGKNILITGSAQGIGFLLATGLAEYGAE-IIINDITAERAELAVAKLRQEGIKAHAAPF 65

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +VT++ +V+A ++   ++ G +D++ +NAGI         +     ++ + A+N   +  
Sbjct: 66  NVTHKQEVEAAIEHIEKDIGPIDVLINNAGI--QRRHPFTEFPEQEWNDVIAVNQTAVFL 123

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +  AR MV+    G I+   S+    G    T Y  SK AV  L R   V+L  H I+
Sbjct: 124 VSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQ 182

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR--AGHVAD------AVLFL 242
           VN ++P    T +T           + L E +     +  R  A    D      A +FL
Sbjct: 183 VNGIAPGYFKTEMT-----------KALVEDEAFTAWLCKRTPAARWGDPQELIGAAVFL 231

Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
           + + S+FV GH L VDGG L+
Sbjct: 232 SSKASDFVNGHLLFVDGGMLV 252

Length = 254

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 99.7 bits (249), Expect = 3e-25
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 4/194 (2%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+GKVA+ITGG+ GIG   A      G ++ + A  Q EL    A     G    +  DV
Sbjct: 4   LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADV 63

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +E  V+  VD+ V  +G LD++ +NAG+       V +L    +  +   N+ G    +
Sbjct: 64  RDEADVQRAVDAIVAAFGGLDVLIANAGV--GHFAPVEELTPEEWRLVIDTNLTGAFYTI 121

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K A   +  GG  G I+  +S+AG+        Y+ SK  ++G   +A + L  +GI+V+
Sbjct: 122 KAAVPALKRGG--GYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVS 179

Query: 193 CVSPHGLATPLTCH 206
            + P  +AT    H
Sbjct: 180 TIMPGSVATHFNGH 193

Length = 237

>gnl|CDD|181668 PRK09135, PRK09135, pteridine reductase; Provisional

 Score = 99.6 bits (249), Expect = 3e-25
 Identities = 78/265 (29%), Positives = 116/265 (43%), Gaps = 43/265 (16%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIV-----IAD---IQDELGRQVATSIGVGKC 65
             KVA+ITGGA  IG   AR     G R+ +      A+   +  EL      S      
Sbjct: 5   SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAA--- 61

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAIN 124
             +  D+ +   +  LV + V  +G+LD + +NA   SS   T L  +  + +D LFA N
Sbjct: 62  --LQADLLDPDALPELVAACVAAFGRLDALVNNA---SSFYPTPLGSITEAQWDDLFASN 116

Query: 125 VRG-----MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           ++       AA  +   +       RG+IV    +      K    Y  +K A+  L RS
Sbjct: 117 LKAPFFLSQAAAPQLRKQ-------RGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRS 169

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL-FEPQTPLEGVVLRAG---HV 235
            +++L    +RVN V+P  +  P      G   DE  +     +TPL+    R G    +
Sbjct: 170 LALELAPE-VRVNAVAPGAILWPED----GNSFDEEARQAILARTPLK----RIGTPEDI 220

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGG 260
           A+AV FL   D+ F+TG  L VDGG
Sbjct: 221 AEAVRFLL-ADASFITGQILAVDGG 244

Length = 249

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score =  100 bits (250), Expect = 4e-25
 Identities = 73/256 (28%), Positives = 121/256 (47%), Gaps = 12/256 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L+GKV +++G   G+G T A   A  GA +++ A   + L    A    +G +   V  D
Sbjct: 3   LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTD 62

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +T+E Q   LV   ++ +G++D + +NA  + S  + + D DF+ +  +  +NV G    
Sbjct: 63  ITDEDQCANLVALALERFGRVDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRL 121

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +     + E G  GSIV   S+       +   Y M+K A++   +S + +LG  GIRV
Sbjct: 122 TQAFTPALAESG--GSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRV 179

Query: 192 NCVSPHGL-ATPL------TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           N V+P  +   PL          YG+  +++       + L   +     VA AVLFLA 
Sbjct: 180 NSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDEVASAVLFLAS 238

Query: 245 RDSEFVTGHDLVVDGG 260
             +  +TG  L V+ G
Sbjct: 239 DLARAITGQTLDVNCG 254

Length = 258

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score =   99 bits (249), Expect = 4e-25
 Identities = 79/255 (30%), Positives = 119/255 (46%), Gaps = 12/255 (4%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYV 68
           ++ L  KVA++T    GIG   AR  A  GA ++V +  Q  + R VAT  G G      
Sbjct: 5   RDPLANKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGT 64

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            C V      + LV + V  +G +DI+ SNA + +     +LD     +D++  +NV+  
Sbjct: 65  VCHVGKAEDRERLVATAVNLHGGVDILVSNAAV-NPFFGNILDSTEEVWDKILDVNVKAT 123

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           A   K     M + G  GS+V  +SVA          Y++SK A++GL ++ + +L    
Sbjct: 124 ALMTKAVVPEMEKRG-GGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRN 182

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           IRVNC++P GL       A  M     E + E        + R G     A  V FL   
Sbjct: 183 IRVNCLAP-GLIKTSFSSALWMDKAVEESMKETLR-----IRRLGQPEDCAGIVSFLCSE 236

Query: 246 DSEFVTGHDLVVDGG 260
           D+ ++TG  +VV GG
Sbjct: 237 DASYITGETVVVGGG 251

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|181517 PRK08642, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 99.8 bits (249), Expect = 4e-25
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 11/254 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           ++  +  ++TGG+ G+G   AR FA  GAR++V     ++    +A  +G  +   +  D
Sbjct: 2   QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG-DRAIALQAD 60

Query: 72  VTNECQVKALVDSTVQNYGQ-LDIMFSNAGILSSSD----QTVLDLDFSAFDRLFAINVR 126
           VT+  QV+A+  +  +++G+ +  + +NA    S D    +   D+ +  F +    +V+
Sbjct: 61  VTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVK 120

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           G    ++ A   M E G  G I+   +           DY  +K A++GL R+ + +LG 
Sbjct: 121 GALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGP 179

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
           +GI VN VS  GL    T  A     DEV  L    TPL   V      ADAVLF A   
Sbjct: 180 YGITVNMVS-GGLLR--TTDASAATPDEVFDLIAATTPL-RKVTTPQEFADAVLFFASPW 235

Query: 247 SEFVTGHDLVVDGG 260
           +  VTG +LVVDGG
Sbjct: 236 ARAVTGQNLVVDGG 249

Length = 253

>gnl|CDD|236116 PRK07856, PRK07856, short chain dehydrogenase; Provisional

 Score = 99.2 bits (248), Expect = 5e-25
 Identities = 73/250 (29%), Positives = 113/250 (45%), Gaps = 17/250 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+V ++TGG  GIG   AR F   GA ++V        GR+   ++      +   DV
Sbjct: 4   LTGRVVLVTGGTRGIGAGIARAFLAAGATVVV-------CGRRAPETVDGRPAEFHAADV 56

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +  QV ALVD+ V+ +G+LD++ +NAG   S      +      +++  +N+       
Sbjct: 57  RDPDQVAALVDAIVERHGRLDVLVNNAG--GSPYALAAEASPRFHEKIVELNLLAPLLVA 114

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A  VM +    GSIV   SV+G         Y  +K  ++ L RS +V+     +RVN
Sbjct: 115 QAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVN 173

Query: 193 CVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
            V    + T  +   YG       V        PL G +     +A A LFLA   + +V
Sbjct: 174 AVVVGLVRTEQSELHYGDAEGIAAVAATV----PL-GRLATPADIAWACLFLASDLASYV 228

Query: 251 TGHDLVVDGG 260
           +G +L V GG
Sbjct: 229 SGANLEVHGG 238

Length = 252

>gnl|CDD|236040 PRK07523, PRK07523, gluconate 5-dehydrogenase; Provisional

 Score = 98.7 bits (246), Expect = 9e-25
 Identities = 81/254 (31%), Positives = 117/254 (46%), Gaps = 17/254 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L G+ A++TG + GIG   A   A  GA +I+      +L     +  G G   H +  D
Sbjct: 8   LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFD 67

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF--SAFDRLFAINVRGMA 129
           VT+   V+A +D+     G +DI+ +NAG+     +T L+ DF   AF+RL   N+  + 
Sbjct: 68  VTDHDAVRAAIDAFEAEIGPIDILVNNAGM---QFRTPLE-DFPADAFERLLRTNISSVF 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +  AR M+  G  G I+  ASV  +        Y  +K AV  L +  +     HG+
Sbjct: 124 YVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGL 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACRD 246
           + N ++P    TPL       P  E     E +TP      R G V +   A +FLA   
Sbjct: 183 QCNAIAPGYFDTPLNAALVADP--EFSAWLEKRTPAG----RWGKVEELVGACVFLASDA 236

Query: 247 SEFVTGHDLVVDGG 260
           S FV GH L VDGG
Sbjct: 237 SSFVNGHVLYVDGG 250

Length = 255

>gnl|CDD|168204 PRK05717, PRK05717, oxidoreductase; Validated

 Score = 98.4 bits (245), Expect = 1e-24
 Identities = 79/261 (30%), Positives = 119/261 (45%), Gaps = 21/261 (8%)

Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
           M        G+VA++TG A GIG   A      G + +V+AD+  E G +VA ++G    
Sbjct: 1   MSEPNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSKVAKALG-ENA 58

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
            ++  DV +E QV A V   +  +G+LD +  NA I    + T+  L  + ++R+ A+N+
Sbjct: 59  WFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNL 118

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G     KH A  +      G+IV  AS            Y  SK  ++ L  + ++ LG
Sbjct: 119 TGPMLLAKHCAPYL--RAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLG 176

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE------GVVLRAGHVADAV 239
              IRVN VSP  +             D  ++  EP +  +      G V     VA  V
Sbjct: 177 PE-IRVNAVSPGWIDA----------RDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAMV 225

Query: 240 LFLACRDSEFVTGHDLVVDGG 260
            +L  R + FVTG + VVDGG
Sbjct: 226 AWLLSRQAGFVTGQEFVVDGG 246

Length = 255

>gnl|CDD|180413 PRK06128, PRK06128, oxidoreductase; Provisional

 Score = 99.5 bits (248), Expect = 1e-24
 Identities = 81/268 (30%), Positives = 123/268 (45%), Gaps = 36/268 (13%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMI-------------VIADIQDELGRQVAT 58
           +L+G+ A+ITG  SGIG  TA  FA  GA +              V+  IQ E GR+   
Sbjct: 52  RLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE-GRKAVA 110

Query: 59  SIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             G         D+ +E   + LV+  V+  G LDI+ + AG  ++    + D+    FD
Sbjct: 111 LPG---------DLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAVKD-IADITTEQFD 160

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
             F  NV  M    K A   +  G    SI+ T S+          DY  +K A++   +
Sbjct: 161 ATFKTNVYAMFWLCKAAIPHLPPG---ASIINTGSIQSYQPSPTLLDYASTKAAIVAFTK 217

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---V 235
           + + Q+   GIRVN V+P  + TPL     G P +++   F  +TP++    R G    +
Sbjct: 218 ALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQPPEKIPD-FGSETPMK----RPGQPVEM 271

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFLI 263
           A   + LA ++S +VTG    V GG L+
Sbjct: 272 APLYVLLASQESSYVTGEVFGVTGGLLL 299

Length = 300

>gnl|CDD|236207 PRK08261, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score =  101 bits (253), Expect = 1e-24
 Identities = 63/197 (31%), Positives = 105/197 (53%), Gaps = 15/197 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADI---QDELGRQVATSIGVGKCHYVH 69
           L GKVA++TG A GIG   A + A  GA ++ + D+    + L   VA  +G G    + 
Sbjct: 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCL-DVPAAGEAL-AAVANRVG-GTA--LA 262

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+T       + +   + +G LDI+  NAGI  + D+T+ ++D + +D + A+N+    
Sbjct: 263 LDITAPDAPARIAEHLAERHGGLDIVVHNAGI--TRDKTLANMDEARWDSVLAVNLLAPL 320

Query: 130 ACVKH--AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
              +   AA  + +GG    IV  +S++G  G + +T+Y  SK  VIGLV++ +  L   
Sbjct: 321 RITEALLAAGALGDGG---RIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAER 377

Query: 188 GIRVNCVSPHGLATPLT 204
           GI +N V+P  + T +T
Sbjct: 378 GITINAVAPGFIETQMT 394

Length = 450

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 97.4 bits (243), Expect = 3e-24
 Identities = 80/263 (30%), Positives = 122/263 (46%), Gaps = 25/263 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           L+GK+A+ITG + GIG   A+ +A  GA  IV  DI  EL   G      +G+ + H   
Sbjct: 8   LKGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGI-EAHGYV 65

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT+E  V+A+V    +  G +DI+ +NAGI+      +L++    F ++  I++    
Sbjct: 66  CDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKRI--PMLEMSAEDFRQVIDIDLNAPF 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              K     M++ G  G I+   S+    G +  + Y  +K  +  L ++ + + G   I
Sbjct: 124 IVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 182

Query: 190 RVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AV 239
           + N + P  +ATP T             P D+       +TP      R G   D     
Sbjct: 183 QCNGIGPGYIATPQTAPLRELQADGSRHPFDQ---FIIAKTPAA----RWGDPEDLAGPA 235

Query: 240 LFLACRDSEFVTGHDLVVDGGFL 262
           +FLA   S FV GH L VDGG L
Sbjct: 236 VFLASDASNFVNGHILYVDGGIL 258

Length = 265

>gnl|CDD|236074 PRK07666, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.1 bits (242), Expect = 3e-24
 Identities = 62/198 (31%), Positives = 99/198 (50%), Gaps = 16/198 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
           L+GK A+ITG   GIG   A   A  G  + ++A  ++ L + VA  +   GV K     
Sbjct: 5   LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENL-KAVAEEVEAYGV-KVVIAT 62

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV++  +V A ++      G +DI+ +NAGI  S     L+LD + ++++  +N+ G  
Sbjct: 63  ADVSDYEEVTAAIEQLKNELGSIDILINNAGI--SKFGKFLELDPAEWEKIIQVNLMG-- 118

Query: 130 ACVKHAARV----MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
             V +A R     M+E    G I+  +S AG  G    + Y  SK  V+GL  S   ++ 
Sbjct: 119 --VYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVR 175

Query: 186 VHGIRVNCVSPHGLATPL 203
            H IRV  ++P  +AT +
Sbjct: 176 KHNIRVTALTPSTVATDM 193

Length = 239

>gnl|CDD|237188 PRK12745, PRK12745, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 97.0 bits (242), Expect = 4e-24
 Identities = 72/257 (28%), Positives = 111/257 (43%), Gaps = 15/257 (5%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA----TSIGVGKCHYVHCD 71
            VA++TGG  GIG   AR  A  G   + I D  D+           ++GV +  +   D
Sbjct: 3   PVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGV-EVIFFPAD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +    +A++D+    +G++D + +NAG+       +LDL   +FDR+ AIN+RG    
Sbjct: 61  VADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFL 120

Query: 132 VKHAARVMV-----EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            +  A+ M+     E     SIV  +SV        R +Y +SK  +    +  + +L  
Sbjct: 121 TQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAE 180

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            GI V  V P  + T +T         + + L                VA AV  LA  D
Sbjct: 181 EGIGVYEVRPGLIKTDMTAPV----TAKYDALIAKGLVPMPRWGEPEDVARAVAALASGD 236

Query: 247 SEFVTGHDLVVDGGFLI 263
             + TG  + VDGG  I
Sbjct: 237 LPYSTGQAIHVDGGLSI 253

Length = 256

>gnl|CDD|132368 TIGR03325, BphB_TodD, cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

 Score = 96.8 bits (241), Expect = 5e-24
 Identities = 86/264 (32%), Positives = 125/264 (47%), Gaps = 18/264 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+G+V ++TGGASG+G      F   GAR+ V+   +   G Q   +        V  D
Sbjct: 2   RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLD--KSAAGLQELEAAHGDAVVGVEGD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTV---LDLDFSAFDRLFAINVRGM 128
           V +    K  V   V  +G++D +  NAGI   S   V    D    AFD +F INV+G 
Sbjct: 60  VRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGY 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              VK A   +V    RGS++ T S AG         Y  +KHAV+GLV+  + +L  + 
Sbjct: 120 LLAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY- 176

Query: 189 IRVNCVSPHGLATPLT-CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD------AVLF 241
           +RVN V+P G+++ L    + GM    +  +  P   +   VL  G + D      A +F
Sbjct: 177 VRVNGVAPGGMSSDLRGPKSLGMADKSISTV--PLGDMLKSVLPIGRMPDAEEYTGAYVF 234

Query: 242 LACR-DSEFVTGHDLVVDGGFLIR 264
            A R D+   TG  L  DGG  +R
Sbjct: 235 FATRGDTVPATGAVLNYDGGMGVR 258

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. Length = 262

>gnl|CDD|223377 COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]

 Score = 96.5 bits (241), Expect = 7e-24
 Identities = 57/234 (24%), Positives = 98/234 (41%), Gaps = 16/234 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD---ELGRQVATSIGVGKCHY 67
             ++GK A+ITG +SGIG   A+  A  G  +I++A  +D    L +++    GV +   
Sbjct: 2   GPMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGV-EVEV 60

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  D+++   ++ L D   +  G +D++ +NAG    +    L+L     + +  +N+  
Sbjct: 61  IPADLSDPEALERLEDELKERGGPIDVLVNNAGF--GTFGPFLELSLDEEEEMIQLNILA 118

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           +    K     MVE G  G I+   S AG         Y  +K  V+    +   +L   
Sbjct: 119 LTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGT 177

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           G++V  V P    T     A G     +            +VL    VA+A L 
Sbjct: 178 GVKVTAVCPGPTRTEF-FDAKGSDVYLLSPGE--------LVLSPEDVAEAALK 222

Length = 265

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 96.1 bits (240), Expect = 7e-24
 Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 19/217 (8%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIA------DIQDELGRQVATSIGVGKCHYVH 69
           KV +ITG +SGIG   A   A  G    VIA       ++                  + 
Sbjct: 1   KVVLITGCSSGIGLALALALAAQG--YRVIATARNPDKLESLGELLNDN------LEVLE 52

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVT+E  +KA V   ++ +G++D++ +NAG        + +        LF +NV G  
Sbjct: 53  LDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFG--PLEETSIEEVRELFEVNVFGPL 110

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +    +M + G  G IV  +SVAG         Y  SK A+  L  S  ++L   GI
Sbjct: 111 RVTRAFLPLMRKQG-SGRIVNVSSVAGLVPTPFLGPYCASKAALEALSESLRLELAPFGI 169

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE 226
           +V  + P  + T          +   +    P  P  
Sbjct: 170 KVTIIEPGPVRTGFA--DNAAGSALEDPEISPYAPER 204

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|212493 cd08932, HetN_like_SDR_c, HetN oxidoreductase-like, classical (c) SDR

 Score = 95.1 bits (237), Expect = 9e-24
 Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 14/193 (7%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ----VATSIGVGKCHYVHCD 71
           KVA++TG + GIG   AR  A  G R+ +         R      A S   G    V  D
Sbjct: 1   KVALVTGASRGIGIEIARALARDGYRVSL-------GLRNPEDLAALSASGGDVEAVPYD 53

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
             +    +ALVD+    +G++D++  NAGI      T+ +   +  +  F+INV   A  
Sbjct: 54  ARDPEDARALVDALRDRFGRIDVLVHNAGI--GRPTTLREGSDAELEAHFSINVIAPAEL 111

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +     + E G  G +V   S++G         Y  SK A+  L  +   +   HG+RV
Sbjct: 112 TRALLPALREAG-SGRVVFLNSLSGKRVLAGNAGYSASKFALRALAHALRQEGWDHGVRV 170

Query: 192 NCVSPHGLATPLT 204
           + V P  + TP+ 
Sbjct: 171 SAVCPGFVDTPMA 183

This subgroup includes Anabaena sp. strain PCC 7120 HetN, a putative oxidoreductase involved in heterocyst differentiation, and related proteins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 223

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 96.2 bits (240), Expect = 2e-23
 Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 16/193 (8%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-DELGRQVATSIGVG-KCHYV 68
               GKVA+ITG ASG G   AR+ A  G + +V+AD+Q D L R VA     G +   V
Sbjct: 2   KDFAGKVAVITGAASGFGLAFARIGAALGMK-LVLADVQQDALDRAVAELRAQGAEVLGV 60

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS---DQTVLDLDFSAFDRLFAINV 125
             DV++  QV+AL D+ ++ +G + ++F+NAG+ +     + ++ D ++     +  +N+
Sbjct: 61  RTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEW-----VLGVNL 115

Query: 126 RGMAACVKHAARVMVEGG-----VRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
            G+   V+    +M+          G IV TAS+AG         Y++SKHAV+ L  + 
Sbjct: 116 WGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETL 175

Query: 181 SVQLGVHGIRVNC 193
              L +   +V  
Sbjct: 176 YQDLSLVTDQVGA 188

Length = 287

>gnl|CDD|182051 PRK09730, PRK09730, putative NAD(P)-binding oxidoreductase; Provisional

 Score = 94.9 bits (236), Expect = 2e-23
 Identities = 79/253 (31%), Positives = 123/253 (48%), Gaps = 16/253 (6%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
            +A++TGG+ GIG  TA L A  G  + V         ++V   I    GK   +  D++
Sbjct: 2   AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADIS 61

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +E QV A+  +  Q+   L  + +NAGIL +   TV +L     +R+ + NV G   C +
Sbjct: 62  DENQVVAMFTAIDQHDEPLAALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCR 120

Query: 134 HAARVMV--EGGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            A + M    GG  G+IV  +S A   G      DY  SK A+  L    S+++   GIR
Sbjct: 121 EAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQGIR 180

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VNCV P  + T +  HA G     V+++ +   P++    R G    VA A+++L    +
Sbjct: 181 VNCVRPGFIYTEM--HASGGEPGRVDRV-KSNIPMQ----RGGQPEEVAQAIVWLLSDKA 233

Query: 248 EFVTGHDLVVDGG 260
            +VTG  + + GG
Sbjct: 234 SYVTGSFIDLAGG 246

Length = 247

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 95.4 bits (238), Expect = 3e-23
 Identities = 54/196 (27%), Positives = 93/196 (47%), Gaps = 6/196 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L GKV ++TG A GIG   AR     GA++ ++   + EL   +A  +G   +   V  D
Sbjct: 7   LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAEL-AALAAELGGDDRVLTVVAD 65

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   ++A  +  V+ +G +D++ +NAGI S    +V  +D  AF R+  +N+ G+   
Sbjct: 66  VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGG--SVAQVDPDAFRRVIDVNLLGVFHT 123

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           V+     ++E   RG ++  +S+A          Y  SK  V     +  +++  HG+ V
Sbjct: 124 VRATLPALIE--RRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTV 181

Query: 192 NCVSPHGLATPLTCHA 207
                  + T L   A
Sbjct: 182 GSAYLSWIDTDLVRDA 197

Length = 296

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 93.3 bits (232), Expect = 6e-23
 Identities = 62/189 (32%), Positives = 90/189 (47%), Gaps = 5/189 (2%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN- 74
           K   ITG ASGIG  TA LFA +G  + +  DI ++    +A  +G         DVT+ 
Sbjct: 1   KAIFITGAASGIGRETALLFARNGWFVGLY-DIDEDGLAALAAELGAENVVAGALDVTDR 59

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
                AL D      G+LD +F+NAG+         D+  +A DR+  INV+G+     +
Sbjct: 60  AAWAAALADFAAATGGRLDALFNNAGVGRGG--PFEDVPLAAHDRMVDINVKGVLNGA-Y 116

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
           AA   ++      ++ TAS +   G      Y  +K AV GL  +  V+   HGIRV  V
Sbjct: 117 AALPYLKATPGARVINTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRVADV 176

Query: 195 SPHGLATPL 203
            P  + TP+
Sbjct: 177 WPWFVDTPI 185

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 97.0 bits (242), Expect = 8e-23
 Identities = 63/213 (29%), Positives = 95/213 (44%), Gaps = 13/213 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
             GK+ ++TG  SGIG  TA  FA  GA  +V +DI +    + A  I       H    
Sbjct: 313 FSGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRV 371

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGI-LSSSDQTVLDLDFSA--FDRLFAINVRG 127
           DV++   ++A  +     +G  DI+ +NAGI ++        LD SA  +DR+  +N+ G
Sbjct: 372 DVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMAGG-----FLDTSAEDWDRVLDVNLWG 426

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           +    +   R MVE G  G IV  AS A     +    Y  SK AV+ L      +L   
Sbjct: 427 VIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAA 486

Query: 188 GIRVNCVSPHGLATPLTCHAY--GMPADEVEKL 218
           GI V  + P  + T +       G  A++  + 
Sbjct: 487 GIGVTAICPGFVDTNIVATTRFAGADAEDEARR 519

Length = 582

>gnl|CDD|180823 PRK07074, PRK07074, short chain dehydrogenase; Provisional

 Score = 93.3 bits (232), Expect = 9e-23
 Identities = 71/251 (28%), Positives = 118/251 (47%), Gaps = 15/251 (5%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           + A++TG A GIG+  AR F   G R ++  DI        A ++G  +   V CD+T+ 
Sbjct: 3   RTALVTGAAGGIGQALARRFLAAGDR-VLALDIDAAALAAFADALGDARFVPVACDLTDA 61

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             + A + +     G +D++ +NAG   ++  ++ D   +++    A+N+     CV+  
Sbjct: 62  ASLAAALANAAAERGPVDVLVANAGAARAA--SLHDTTPASWRADNALNLEAAYLCVEAV 119

Query: 136 ARVMVEGGVRGSIVCTASVAG-SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
              M++   RG++V   SV G +  G     Y  +K  +I   +  +V+ G  GIR N V
Sbjct: 120 LEGMLKRS-RGAVVNIGSVNGMAALG--HPAYSAAKAGLIHYTKLLAVEYGRFGIRANAV 176

Query: 195 SPHGLATPLTCHAYGMPADEVEKLFEPQT---PLEGVVLRAGHVADAVLFLACRDSEFVT 251
           +P  + T     A+        ++FE      PL+        VA+AVLFLA   +  +T
Sbjct: 177 APGTVKTQ----AWEARVAANPQVFEELKKWYPLQDFA-TPDDVANAVLFLASPAARAIT 231

Query: 252 GHDLVVDGGFL 262
           G  L VDGG  
Sbjct: 232 GVCLPVDGGLT 242

Length = 257

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 93.4 bits (232), Expect = 1e-22
 Identities = 74/258 (28%), Positives = 129/258 (50%), Gaps = 18/258 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           LEGKVA++TG  +G+G+  A   A+ G  ++ I  ++     +  T++G  +   +  D+
Sbjct: 8   LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALG-RRFLSLTADL 66

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINVRGMAA 130
                + AL++  V  +G +DI+ +NAG++   D     ++FS   +D +  +N++ +  
Sbjct: 67  RKIDGIPALLERAVAEFGHIDILVNNAGLIRREDA----IEFSEKDWDDVMNLNIKSVFF 122

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + AA+  +  G  G I+  AS+    GG R   Y  SK  V+G+ R  + +   H I 
Sbjct: 123 MSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNIN 182

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVE-KLFEPQTPLEGVVLRAGHVAD---AVLFLACRD 246
           VN ++P  +AT  T     + ADE        + P      R G  +D    V+FLA   
Sbjct: 183 VNAIAPGYMATNNTQ---QLRADEQRSAEILDRIPAG----RWGLPSDLMGPVVFLASSA 235

Query: 247 SEFVTGHDLVVDGGFLIR 264
           S+++ G+ + VDGG+L R
Sbjct: 236 SDYINGYTIAVDGGWLAR 253

Length = 253

>gnl|CDD|183714 PRK12742, PRK12742, oxidoreductase; Provisional

 Score = 92.5 bits (230), Expect = 1e-22
 Identities = 76/262 (29%), Positives = 103/262 (39%), Gaps = 39/262 (14%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
               GK  ++ GG+ GIG    R F   GA +        +   ++A   G      V  
Sbjct: 2   GAFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGA---TAVQT 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D  +    +  V   V+  G LDI+  NAGI    D   L+LD    DRLF IN+     
Sbjct: 59  DSAD----RDAVIDVVRKSGALDILVVNAGIAVFGDA--LELDADDIDRLFKINIHAPYH 112

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR-----TDYHMSKHAVIGLVRSASVQLG 185
               AAR M EG   G I+    + GS  G R        Y  SK A+ G+ R  +   G
Sbjct: 113 ASVEAARQMPEG---GRII----IIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFG 165

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL------RAGHVADAV 239
             GI +N V P  + T         PA+       P   +    +      R   VA  V
Sbjct: 166 PRGITINVVQPGPIDTDAN------PAN------GPMKDMMHSFMAIKRHGRPEEVAGMV 213

Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
            +LA  ++ FVTG    +DG F
Sbjct: 214 AWLAGPEASFVTGAMHTIDGAF 235

Length = 237

>gnl|CDD|183773 PRK12824, PRK12824, acetoacetyl-CoA reductase; Provisional

 Score = 92.5 bits (230), Expect = 1e-22
 Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 28/257 (10%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVI--------ADIQDELGRQVATSIGVGKCHY 67
           K+A++TG   GIG   AR   + G R+I           D  +E G          +   
Sbjct: 3   KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTED------QVRL 56

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
              DVT+  +    +    +  G +DI+ +NAGI  + D     +    ++ +   N+  
Sbjct: 57  KELDVTDTEECAEALAEIEEEEGPVDILVNNAGI--TRDSVFKRMSHQEWNDVINTNLNS 114

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           +    +     M E G  G I+  +SV G  G   +T+Y  +K  +IG  ++ + +   +
Sbjct: 115 VFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARY 173

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLAC 244
           GI VNC++P  +ATP+      M  + ++ +   Q P++    R G    +A AV FL  
Sbjct: 174 GITVNCIAPGYIATPM---VEQMGPEVLQSIVN-QIPMK----RLGTPEEIAAAVAFLVS 225

Query: 245 RDSEFVTGHDLVVDGGF 261
             + F+TG  + ++GG 
Sbjct: 226 EAAGFITGETISINGGL 242

Length = 245

>gnl|CDD|187615 cd05357, PR_SDR_c, pteridine reductase (PR), classical (c) SDRs

 Score = 92.3 bits (230), Expect = 2e-22
 Identities = 71/252 (28%), Positives = 110/252 (43%), Gaps = 25/252 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIA-DIQDELGRQVATSIGVG-KCHYVHCDVT 73
            VA++TG A  IG   A   A  G R++V     + E  R       +      V  D++
Sbjct: 1   AVALVTGAAKRIGRAIAEALAAEGYRVVVHYNRSEAEAQRLKDELNALRNSAVLVQADLS 60

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +      LV +  + +G+ D++ +NA         +      A+  LF IN++     ++
Sbjct: 61  DFAACADLVAAAFRAFGRCDVLVNNASAF--YPTPLGQGSEDAWAELFGINLKAPYLLIQ 118

Query: 134 HAARVMVEGGVRGSIV--CTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
             AR  + G   GSI+    A             Y MSK A+ GL RSA+++L  + IRV
Sbjct: 119 AFAR-RLAGSRNGSIINIIDAMTDR--PLTGYFAYCMSKAALEGLTRSAALELAPN-IRV 174

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLACRDSE 248
           N ++P      L      M A+  E     + PL+    R      +ADAV+FL   DS 
Sbjct: 175 NGIAP-----GLILLPEDMDAEYRENA-LRKVPLK----RRPSAEEIADAVIFLL--DSN 222

Query: 249 FVTGHDLVVDGG 260
           ++TG  + VDGG
Sbjct: 223 YITGQIIKVDGG 234

Pteridine reductases (PRs), members of the SDR family, catalyzes the NAD-dependent reduction of folic acid, dihydrofolate and related compounds. In Leishmania, pteridine reductase (PTR1) acts to circumvent the anti-protozoan drugs that attack dihydrofolate reductase activity. Proteins in this subgroup have an N-terminal NAD-binding motif and a YxxxK active site motif, but have an Asp instead of the usual upstream catalytic Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 234

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 92.1 bits (229), Expect = 2e-22
 Identities = 61/197 (30%), Positives = 89/197 (45%), Gaps = 16/197 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---------- 62
           L GKVA +TG + GIG   A   A  GA ++V A    E     A S+            
Sbjct: 1   LSGKVAFVTGASRGIGRAIALRLAKAGATVVVAAKTASEGDNGSAKSLPGTIEETAEEIE 60

Query: 63  ---GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
              G+   +  DV +E QV+ALV++TV  +G+LDI+ +NAG +  S   V D     FD 
Sbjct: 61  AAGGQALPIVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWLS--LVEDTPAKRFDL 118

Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           +  +N+RG     + A   MV+ G  G I+  +        +    Y   K  +  L   
Sbjct: 119 MQRVNLRGTYLLSQAALPHMVKAGQ-GHILNISPPLSLRPARGDVAYAAGKAGMSRLTLG 177

Query: 180 ASVQLGVHGIRVNCVSP 196
            + +L  HGI VN + P
Sbjct: 178 LAAELRRHGIAVNSLWP 194

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187608 cd05350, SDR_c6, classical (c) SDR, subgroup 6

 Score = 92.0 bits (229), Expect = 2e-22
 Identities = 61/196 (31%), Positives = 87/196 (44%), Gaps = 4/196 (2%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA-TSIGVGKCHYVHCDVTNEC 76
            +ITG +SGIG   AR FA  G  + + A   D L    A              DVT+E 
Sbjct: 1   VLITGASSGIGRALAREFAKAGYNVALAARRTDRLDELKAELLNPNPSVEVEILDVTDEE 60

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
           + + ++       G LD++  NAG+      ++ DL F AF      N+ G AA ++ A 
Sbjct: 61  RNQLVIAELEAELGGLDLVIINAGV--GKGTSLGDLSFKAFRETIDTNLLGAAAILEAAL 118

Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
                 G RG +V  +SVA   G      Y  SK A+  L  S    +   GIRV  ++P
Sbjct: 119 PQFRAKG-RGHLVLISSVAALRGLPGAAAYSASKAALSSLAESLRYDVKKRGIRVTVINP 177

Query: 197 HGLATPLTCHAYGMPA 212
             + TPLT + + MP 
Sbjct: 178 GFIDTPLTANMFTMPF 193

These proteins are members of the classical SDR family, with a canonical active site tetrad and a fairly well conserved typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|235910 PRK07024, PRK07024, short chain dehydrogenase; Provisional

 Score = 91.9 bits (229), Expect = 3e-22
 Identities = 62/193 (32%), Positives = 88/193 (45%), Gaps = 3/193 (1%)

Query: 20  ITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVK 79
           ITG +SGIG+  AR +A  GA + ++A   D L    A      +      DV +   + 
Sbjct: 7   ITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALA 66

Query: 80  ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVM 139
           A     +  +G  D++ +NAGI S    T    D + F  +   N  GM A  +     M
Sbjct: 67  AAAADFIAAHGLPDVVIANAGI-SVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPM 125

Query: 140 VEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGL 199
                RG++V  ASVAG  G      Y  SK A I  + S  V+L   G+RV  ++P  +
Sbjct: 126 RAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYI 184

Query: 200 ATPLTCH-AYGMP 211
            TP+T H  Y MP
Sbjct: 185 RTPMTAHNPYPMP 197

Length = 257

>gnl|CDD|180773 PRK06949, PRK06949, short chain dehydrogenase; Provisional

 Score = 91.7 bits (228), Expect = 4e-22
 Identities = 83/263 (31%), Positives = 134/263 (50%), Gaps = 26/263 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEGKVA++TG +SG+G   A++ A  GA+ +V+A  + E  +++   I    G  H V  
Sbjct: 7   LEGKVALVTGASSGLGARFAQVLAQAGAK-VVLASRRVERLKELRAEIEAEGGAAHVVSL 65

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+   +KA V       G +DI+ +N+G+  S+ Q ++D+  + FD +F  N RG   
Sbjct: 66  DVTDYQSIKAAVAHAETEAGTIDILVNNSGV--STTQKLVDVTPADFDFVFDTNTRGAFF 123

Query: 131 CVKHAARVMV-----EGGVR--GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
             +  A+ M+      G  +  G I+  ASVAG     +   Y MSK AV+ + R+ +++
Sbjct: 124 VAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALE 183

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVAD---A 238
            G HGI VN + P  + T +  H +    ++ +KL    P+        R G   D    
Sbjct: 184 WGRHGINVNAICPGYIDTEINHHHWE--TEQGQKLVSMLPRK-------RVGKPEDLDGL 234

Query: 239 VLFLACRDSEFVTGHDLVVDGGF 261
           +L LA  +S+F+ G  +  D GF
Sbjct: 235 LLLLAADESQFINGAIISADDGF 257

Length = 258

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 91.2 bits (227), Expect = 6e-22
 Identities = 65/267 (24%), Positives = 120/267 (44%), Gaps = 46/267 (17%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
            +G+V ++TG   G+G   A  FA+ GA+ +V+ D+  +         G GK       V
Sbjct: 3   FDGRVVLVTGAGGGLGRAYALAFAERGAK-VVVNDLGGDRK-------GSGKSSSAADKV 54

Query: 73  TNECQVKA-----------------LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFS 115
            +E  +KA                 +V + +  +G++DI+ +NAGIL   D++   +   
Sbjct: 55  VDE--IKAAGGKAVANYDSVEDGEKIVKTAIDAFGRVDILVNNAGIL--RDRSFAKMSEE 110

Query: 116 AFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            +D +  ++++G     + A   M +    G I+ T+S AG  G   + +Y  +K  ++G
Sbjct: 111 DWDLVMRVHLKGSFKVTRAAWPYMRKQK-FGRIINTSSAAGLYGNFGQANYSAAKLGLLG 169

Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHV 235
           L  + +++   + I  N ++P    + +T     MP D  +             L+  +V
Sbjct: 170 LSNTLAIEGAKYNITCNTIAPAA-GSRMTETV--MPEDLFDA------------LKPEYV 214

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFL 262
           A  VL+L C +S  VTG    V  G++
Sbjct: 215 APLVLYL-CHESCEVTGGLFEVGAGWI 240

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|236216 PRK08277, PRK08277, D-mannonate oxidoreductase; Provisional

 Score = 91.5 bits (228), Expect = 7e-22
 Identities = 75/272 (27%), Positives = 117/272 (43%), Gaps = 30/272 (11%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+GKVA+ITGG   +G   A+  A  GA+ + I D   E    V   I    G+   V  
Sbjct: 8   LKGKVAVITGGGGVLGGAMAKELARAGAK-VAILDRNQEKAEAVVAEIKAAGGEALAVKA 66

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAG-------------ILSSSDQTVLDLDFSAF 117
           DV ++  ++      ++++G  DI+ + AG              L    +T  DLD   F
Sbjct: 67  DVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGF 126

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
           + +F +N+ G     +  A+ MV     G+I+  +S+       +   Y  +K A+    
Sbjct: 127 EFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISSMNAFTPLTKVPAYSAAKAAISNFT 185

Query: 178 RSASVQLGVHGIRVNCVSPHGLAT----PLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG 233
           +  +V     GIRVN ++P    T     L  +  G   +   K+    TP+     R G
Sbjct: 186 QWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILA-HTPMG----RFG 240

Query: 234 HVAD---AVLFLACRD-SEFVTGHDLVVDGGF 261
              +    +L+LA    S FVTG  L VDGGF
Sbjct: 241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGF 272

Length = 278

>gnl|CDD|187592 cd05331, DH-DHB-DH_SDR_c, 2,3 dihydro-2,3 dihydrozybenzoate dehydrogenases, classical (c) SDRs

 Score = 90.6 bits (225), Expect = 9e-22
 Identities = 70/254 (27%), Positives = 111/254 (43%), Gaps = 26/254 (10%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVI---ADIQDELGRQVATSIGVGKCHYVHCDVTN 74
            I+TG A GIG   AR     GA +I +     +  E G  +              DV +
Sbjct: 1   VIVTGAAQGIGRAVARHLLQAGATVIALDLPFVLLLEYGDPLRL---------TPLDVAD 51

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGIL--SSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
              V+ +    +  +G +D + + AG+L   ++D     L    +++ FA+NV G+   +
Sbjct: 52  AAAVREVCSRLLAEHGPIDALVNCAGVLRPGATDP----LSTEDWEQTFAVNVTGVFNLL 107

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  A  M +    G+IV  AS A          Y  SK A+  L +   ++L  +G+R N
Sbjct: 108 QAVAPHMKDRR-TGAIVTVASNAAHVPRISMAAYGASKAALASLSKCLGLELAPYGVRCN 166

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKL------FEPQTPLEGVVLRAGHVADAVLFLACRD 246
            VSP    T +    +       + +      F    PL G + +   +A+AVLFLA   
Sbjct: 167 VVSPGSTDTAMQRTLWHDEDGAAQVIAGVPEQFRLGIPL-GKIAQPADIANAVLFLASDQ 225

Query: 247 SEFVTGHDLVVDGG 260
           +  +T HDLVVDGG
Sbjct: 226 AGHITMHDLVVDGG 239

2,3 dihydro-2,3 dihydrozybenzoate dehydrogenase shares the characteristics of the classical SDRs. This subgroup includes Escherichai coli EntA which catalyzes the NAD+-dependent oxidation of 2,3-dihydro-2,3-dihydroxybenzoate to 2,3-dihydroxybenzoate during biosynthesis of the siderophore Enterobactin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187601 cd05343, Mgc4172-like_SDR_c, human Mgc4172-like, classical (c) SDRs

 Score = 90.6 bits (225), Expect = 1e-21
 Identities = 62/254 (24%), Positives = 109/254 (42%), Gaps = 17/254 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV--H 69
           +  G+VA++TG + GIG   AR    HG +++  A   D++    A     G        
Sbjct: 3   RWRGRVALVTGASVGIGAAVARALVQHGMKVVGCARRVDKIEALAAECQSAGYPTLFPYQ 62

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CD++NE Q+ ++  +    +  +D+  +NAG+       +L      +  +F +NV  ++
Sbjct: 63  CDLSNEEQILSMFSAIRTQHQGVDVCINNAGLARPE--PLLSGKTEGWKEMFDVNVLALS 120

Query: 130 ACVKHAARVMVEGGV-RGSIVCTASVAGS--CGGKRRTDYHMSKHAVIGL---VRSASVQ 183
            C + A + M E  V  G I+   S++G           Y  +KHAV  L   +R    +
Sbjct: 121 ICTREAYQSMKERNVDDGHIININSMSGHRVPPVSVFHFYAATKHAVTALTEGLRQELRE 180

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
              H IR   +SP  + T      +    ++    +E   P     L+   VA+AVL+  
Sbjct: 181 AKTH-IRATSISPGLVETEFAFKLHDNDPEKAAATYE-SIP----CLKPEDVANAVLY-V 233

Query: 244 CRDSEFVTGHDLVV 257
                 V  HD+++
Sbjct: 234 LSTPPHVQIHDILL 247

Human Mgc4172-like proteins, putative SDRs. These proteins are members of the SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|187646 cd08942, RhlG_SDR_c, RhlG and related beta-ketoacyl reductases, classical (c) SDRs

 Score = 90.2 bits (224), Expect = 1e-21
 Identities = 67/254 (26%), Positives = 115/254 (45%), Gaps = 13/254 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           + GK+ ++TGG+ GIG   A+ F + GAR+I+ A   +            G+C  +  D+
Sbjct: 4   VAGKIVLVTGGSRGIGRMIAQGFLEAGARVIISARKAEACADAAEELSAYGECIAIPADL 63

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++E  ++ALV    +   +LD++ +NAG  ++    +     S +D++  INV+ +    
Sbjct: 64  SSEEGIEALVARVAERSDRLDVLVNNAG--ATWGAPLEAFPESGWDKVMDINVKSVFFLT 121

Query: 133 KHAARVMVEGGVRG---SIVCTASVAGSCG-GKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           +    ++           ++   S+AG    G     Y  SK AV  L R  + +L    
Sbjct: 122 QALLPLLRAAATAENPARVINIGSIAGIVVSGLENYSYGASKAAVHQLTRKLAKELAGEH 181

Query: 189 IRVNCVSPHGLATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
           I VN ++P    + +T      PA  +  EK      PL G   R   +A   + LA R 
Sbjct: 182 ITVNAIAPGRFPSKMTAFLLNDPAALEAEEK----SIPL-GRWGRPEDMAGLAIMLASRA 236

Query: 247 SEFVTGHDLVVDGG 260
             ++TG  + VDGG
Sbjct: 237 GAYLTGAVIPVDGG 250

Pseudomonas aeruginosa RhlG is an SDR-family beta-ketoacyl reductase involved in Rhamnolipid biosynthesis. RhlG is similar to but distinct from the FabG family of beta-ketoacyl-acyl carrier protein (ACP) of type II fatty acid synthesis. RhlG and related proteins are classical SDRs, with a canonical active site tetrad and glycine-rich NAD(P)-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181188 PRK07985, PRK07985, oxidoreductase; Provisional

 Score = 90.8 bits (225), Expect = 2e-21
 Identities = 76/264 (28%), Positives = 122/264 (46%), Gaps = 34/264 (12%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIV------------IADIQDELGRQVATS 59
           +L+ + A++TGG SGIG   A  +A  GA + +            +  I +E GR+    
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLL 105

Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
            G         D+++E   ++LV    +  G LDIM   AG    +   + DL    F +
Sbjct: 106 PG---------DLSDEKFARSLVHEAHKALGGLDIMALVAG-KQVAIPDIADLTSEQFQK 155

Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
            FAINV  +    + A  ++ +G    SI+ T+S+          DY  +K A++   R 
Sbjct: 156 TFAINVFALFWLTQEAIPLLPKGA---SIITTSSIQAYQPSPHLLDYAATKAAILNYSRG 212

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VA 236
            + Q+   GIRVN V+P  + T L     G   D++ + F  QTP++    RAG    +A
Sbjct: 213 LAKQVAEKGIRVNIVAPGPIWTALQISG-GQTQDKIPQ-FGQQTPMK----RAGQPAELA 266

Query: 237 DAVLFLACRDSEFVTGHDLVVDGG 260
              ++LA ++S +VT     V GG
Sbjct: 267 PVYVYLASQESSYVTAEVHGVCGG 290

Length = 294

>gnl|CDD|215720 pfam00106, adh_short, short chain dehydrogenase

 Score = 86.8 bits (216), Expect = 4e-21
 Identities = 46/179 (25%), Positives = 72/179 (40%), Gaps = 23/179 (12%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIV----------IADIQDELGRQVATSIGVGKC 65
              +ITGG  G+G   AR  A  GAR +V           A++  EL    A        
Sbjct: 1   GTVLITGGTGGLGLALARWLAAEGARHLVLVSRRGPAPGAAELVAELEALGAEV------ 54

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
               CDV +   + AL+ +     G LD +  NAG+L   D  + +L    F+R+ A  V
Sbjct: 55  TVAACDVADRDALAALLAALPAALGPLDGVVHNAGVL--DDGPLEELTPERFERVLAPKV 112

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
            G      +   +  +  + G+ V  +SVAG  G   + +Y  +  A+  L      + 
Sbjct: 113 TGAW----NLHELTRDLDL-GAFVLFSSVAGVLGSPGQANYAAANAALDALAEHRRAEG 166

This family contains a wide variety of dehydrogenases. Length = 167

>gnl|CDD|222222 pfam13561, adh_short_C2, Enoyl-(Acyl carrier protein) reductase

 Score = 88.4 bits (220), Expect = 4e-21
 Identities = 65/257 (25%), Positives = 107/257 (41%), Gaps = 38/257 (14%)

Query: 22  GGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKCHYVHCDVTN 74
              + I    A+  A+ GA +++            DEL +++   +       +  DVT+
Sbjct: 3   ADDNSIAWAIAKAAAEEGAEVVLTTWPPALRMGAVDELAKELPADV-------IPLDVTS 55

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT--VLDLDFSAFDRLFAINVRGMAACV 132
           +  +  L +   ++ G++D +  +  +     +    LD     F +   I+     +  
Sbjct: 56  DEDIDELFEKVKEDGGKIDFLVHSIAMSPEIRKGKPYLDTSREGFLKALDISAYSFISLA 115

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRT-----DYHMSKHAVIGLVRSASVQLGVH 187
           K A  +M EGG   SIV  + +A       R         ++K A+  L R  + +LG  
Sbjct: 116 KAAKPLMNEGG---SIVALSYIAA-----ERVFPGYGGMGVAKAALESLARYLAYELGRK 167

Query: 188 GIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           GIRVN +S    A P  T    G+   D++ +  E   PL G    A  VA+A  FL   
Sbjct: 168 GIRVNTIS----AGPTKTTAGSGIGGFDKMVEYAEEMAPL-GRNASAEEVANAAAFL-LS 221

Query: 246 D-SEFVTGHDLVVDGGF 261
           D +  +TG  L VDGGF
Sbjct: 222 DLARGITGQILYVDGGF 238

Length = 239

>gnl|CDD|181120 PRK07792, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 89.1 bits (221), Expect = 9e-21
 Identities = 78/257 (30%), Positives = 117/257 (45%), Gaps = 22/257 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL-GRQVATSIGV--GKCHYVH 69
           L GKVA++TG A+G+G   A   A  GA  +V+ D+   L    V   I     K   V 
Sbjct: 10  LSGKVAVVTGAAAGLGRAEALGLARLGA-TVVVNDVASALDASDVLDEIRAAGAKAVAVA 68

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D++       LV +T    G LDI+ +NAGI    D+ + ++    +D + A+++RG  
Sbjct: 69  GDISQRATADELV-ATAVGLGGLDIVVNNAGITR--DRMLFNMSDEEWDAVIAVHLRGHF 125

Query: 130 ACVKHAA-----RVMVEGG-VRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
              ++AA     +    GG V G IV T+S AG  G   + +Y  +K  +  L  SA+  
Sbjct: 126 LLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARA 185

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           LG +G+R N + P    T +T   +G   D      +P +P         HV   V FLA
Sbjct: 186 LGRYGVRANAICPRA-RTAMTADVFGDAPDVEAGGIDPLSP--------EHVVPLVQFLA 236

Query: 244 CRDSEFVTGHDLVVDGG 260
              +  V G   +V G 
Sbjct: 237 SPAAAEVNGQVFIVYGP 253

Length = 306

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 86.4 bits (214), Expect = 2e-20
 Identities = 69/228 (30%), Positives = 103/228 (45%), Gaps = 23/228 (10%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           K A++TG + GIGE TARL    G R+ + A  +DE     A +  +     +  DV +E
Sbjct: 1   KAALVTGASRGIGEATARLLHAEGYRVGICA--RDEARLAAAAAQELEGVLGLAGDVRDE 58

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             V+  VD+  + +G LD + +NAG+     + V +L    +  +   N+ G   C+  A
Sbjct: 59  ADVRRAVDAMEEAFGGLDALVNNAGV--GVMKPVEELTPEEWRLVLDTNLTGAFYCIHKA 116

Query: 136 A-RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
           A  ++  GG  G+IV   S+AG    K    Y+ SK  ++GL  +A + L    IRV  V
Sbjct: 117 APALLRRGG--GTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIRVVNV 174

Query: 195 SPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
            P  + T       G P  +  K            L    VA AVLF 
Sbjct: 175 MPGSVDT----GFAGSPEGQAWK------------LAPEDVAQAVLFA 206

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|236099 PRK07791, PRK07791, short chain dehydrogenase; Provisional

 Score = 86.7 bits (215), Expect = 4e-20
 Identities = 75/274 (27%), Positives = 126/274 (45%), Gaps = 47/274 (17%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMI--------------------VIADIQDEL 52
           L+G+V I+TG   GIG   A  FA  GAR++                    V+ +I    
Sbjct: 4   LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAG 63

Query: 53  GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL 112
           G  VA             D+ +      LVD+ V+ +G LD++ +NAGIL   D+ + ++
Sbjct: 64  GEAVANG----------DDIADWDGAANLVDAAVETFGGLDVLVNNAGIL--RDRMIANM 111

Query: 113 DFSAFDRLFAINVRGMAACVKHAA---RVMVEGG--VRGSIVCTASVAGSCGGKRRTDYH 167
               +D + A++++G  A ++HAA   R   + G  V   I+ T+S AG  G   + +Y 
Sbjct: 112 SEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYS 171

Query: 168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK-LFEPQTPLE 226
            +K  +  L   A+ +LG +G+ VN ++P    T +T   +     + E+  F+   P  
Sbjct: 172 AAKAGIAALTLVAAAELGRYGVTVNAIAPAA-RTRMTETVFAEMMAKPEEGEFDAMAP-- 228

Query: 227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
                  +V+  V++L   +S  VTG    V+GG
Sbjct: 229 ------ENVSPLVVWLGSAESRDVTGKVFEVEGG 256

Length = 286

>gnl|CDD|187649 cd08945, PKR_SDR_c, Polyketide ketoreductase, classical (c) SDR

 Score = 85.7 bits (212), Expect = 6e-20
 Identities = 72/263 (27%), Positives = 109/263 (41%), Gaps = 30/263 (11%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKCHYV 68
           +VA++TG  SGIG   AR     G R+ V       +A    EL      + G       
Sbjct: 4   EVALVTGATSGIGLAIARRLGKEGLRVFVCARGEEGLATTVKELREAGVEADGRT----- 58

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDV +  +++ALV + V  YG +D++ +NAG         L  +   +  +   N+ G+
Sbjct: 59  -CDVRSVPEIEALVAAAVARYGPIDVLVNNAGRSGGGATAELADEL--WLDVVETNLTGV 115

Query: 129 AACVKHAARVMVEGGVR----GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
               K    V+  GG+     G I+  AS  G  G      Y  SKH V+G  ++  ++L
Sbjct: 116 FRVTK---EVLKAGGMLERGTGRIINIASTGGKQGVVHAAPYSASKHGVVGFTKALGLEL 172

Query: 185 GVHGIRVNCVSPHGLATPLTCH-------AYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
              GI VN V P  + TP+           + +  +E       + PL G  +    VA 
Sbjct: 173 ARTGITVNAVCPGFVETPMAASVREHYADIWEVSTEEAFDRITARVPL-GRYVTPEEVAG 231

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
            V +L    +  VT   L V GG
Sbjct: 232 MVAYLIGDGAAAVTAQALNVCGG 254

Polyketide ketoreductase (KR) is a classical SDR with a characteristic NAD-binding pattern and active site tetrad. Aromatic polyketides include various aromatic compounds of pharmaceutical interest. Polyketide KR, part of the type II polyketide synthase (PKS) complex, is comprised of stand-alone domains that resemble the domains found in fatty acid synthase and multidomain type I PKS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 258

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 10/202 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH--YVHCDVT 73
           KVA++TG   GIG    R  A  G   +++     E G+     +        +   DVT
Sbjct: 1   KVALVTGANRGIGFEIVRQLAKSGPGTVILTARDVERGQAAVEKLRAEGLSVRFHQLDVT 60

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGI-LSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++  ++A  D   + YG LDI+ +NAGI     D +    +          N  G    V
Sbjct: 61  DDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDSTPTRE--QARETMKTNFFG-TVDV 117

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             A   +++    G IV  +S  GS      + Y +SK A+  L R  + +L   GI+VN
Sbjct: 118 TQALLPLLKKSPAGRIVNVSSGLGSLT----SAYGVSKAALNALTRILAKELKETGIKVN 173

Query: 193 CVSPHGLATPLTCHAYGMPADE 214
              P  + T +         +E
Sbjct: 174 ACCPGWVKTDMGGGKAPKTPEE 195

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187642 cd08937, DHB_DH-like_SDR_c, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase (DHB DH)-like, classical (c) SDR

 Score = 83.3 bits (206), Expect = 5e-19
 Identities = 76/267 (28%), Positives = 116/267 (43%), Gaps = 32/267 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVH 69
           + EGKV ++TG A GIG   A   A  GAR +++ D   EL  +V   I       H   
Sbjct: 1   RFEGKVVVVTGAAQGIGRGVAERLAGEGAR-VLLVDR-SELVHEVLAEILAAGDAAHVHT 58

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILS------SSDQTVLDLDFSAFDRLF 121
            D+      + +V + V+ +G++D++ +N G  I +        +Q   ++  S F  L+
Sbjct: 59  ADLETYAGAQGVVRAAVERFGRVDVLINNVGGTIWAKPYEHYEEEQIEAEIRRSLFPTLW 118

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
                    C +     M+E   +G IV  +S+A    G  R  Y  +K  V  L  S +
Sbjct: 119 ---------CCRAVLPHMLERQ-QGVIVNVSSIATR--GIYRIPYSAAKGGVNALTASLA 166

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYG-MPADEVEKL----FEPQTPLEGVVLRAG--- 233
            +    GIRVN V+P G   P         P  E EK+       QT    ++ R G   
Sbjct: 167 FEHARDGIRVNAVAPGGTEAPPRKIPRNAAPMSEQEKVWYQRIVDQTLDSSLMGRYGTID 226

Query: 234 HVADAVLFLACRDSEFVTGHDLVVDGG 260
               A+LFLA  ++ ++TG  L V GG
Sbjct: 227 EQVRAILFLASDEASYITGTVLPVGGG 253

DHB DH (aka 1,2-dihydroxycyclohexa-3,5-diene-1-carboxylate dehydrogenase) catalyzes the NAD-dependent conversion of 1,2-dihydroxycyclohexa-3,4-diene carboxylate to a catechol. This subgroup also contains Pseudomonas putida F1 CmtB, 2,3-dihydroxy-2,3-dihydro-p-cumate dehydrogenase, the second enzyme in the pathway for catabolism of p-cumate catabolism. This subgroup shares the glycine-rich NAD-binding motif of the classical SDRs and shares the same catalytic triad; however, the upstream Asn implicated in cofactor binding or catalysis in other SDRs is generally substituted by a Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|188169 TIGR01829, AcAcCoA_reduct, acetoacetyl-CoA reductase

 Score = 83.2 bits (206), Expect = 5e-19
 Identities = 65/247 (26%), Positives = 111/247 (44%), Gaps = 10/247 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           ++A++TGG  GIG    +  A  G R+       +E         G        V  DV+
Sbjct: 1   RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVS 60

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +    KA V       G +D++ +NAGI  + D T   + +  +  +   N+  +    +
Sbjct: 61  SFESCKAAVAKVEAELGPIDVLVNNAGI--TRDATFKKMTYEQWSAVIDTNLNSVFNVTQ 118

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
                M E G  G I+  +SV G  G   +T+Y  +K  +IG  ++ + +    G+ VN 
Sbjct: 119 PVIDGMRERGW-GRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT 177

Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH 253
           +SP  +AT +      M  D +  +   Q P+ G + R   +A AV FLA  ++ ++TG 
Sbjct: 178 ISPGYIATDMV---MAMREDVLNSI-VAQIPV-GRLGRPEEIAAAVAFLASEEAGYITGA 232

Query: 254 DLVVDGG 260
            L ++GG
Sbjct: 233 TLSINGG 239

This model represent acetoacetyl-CoA reductase, a member of the family short-chain-alcohol dehydrogenases. Note that, despite the precision implied by the enzyme name, the reaction of EC 1.1.1.36 is defined more generally as (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. Length = 242

>gnl|CDD|187618 cd05360, SDR_c3, classical (c) SDR, subgroup 3

 Score = 82.4 bits (204), Expect = 7e-19
 Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 26/236 (11%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYVHCDVT 73
           V +ITG +SGIG  TA  FA+ GA++++ A   +   EL R+V      G+   V  DV 
Sbjct: 2   VVVITGASSGIGRATALAFAERGAKVVLAARSAEALHELAREVREL--GGEAIAVVADVA 59

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN----VRGMA 129
           +  QV+   D+ V+ +G++D   +NAG+  +      D+    F R+F +N    V G  
Sbjct: 60  DAAQVERAADTAVERFGRIDTWVNNAGV--AVFGRFEDVTPEEFRRVFDVNYLGHVYGTL 117

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG- 188
           A + H  R        G+++   S+ G      +  Y  SKHAV G   S   +L   G 
Sbjct: 118 AALPHLRR-----RGGGALINVGSLLGYRSAPLQAAYSASKHAVRGFTESLRAELAHDGA 172

Query: 189 -IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
            I V  V P  + TP   HA       + K  +P+ P    + +   VA+A++  A
Sbjct: 173 PISVTLVQPTAMNTPFFGHA----RSYMGK--KPKPP--PPIYQPERVAEAIVRAA 220

These proteins are members of the classical SDR family, with a canonical active site triad (and also active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 233

>gnl|CDD|187589 cd05328, 3alpha_HSD_SDR_c, alpha hydroxysteroid dehydrogenase (3alpha_HSD), classical (c) SDRs

 Score = 82.5 bits (204), Expect = 9e-19
 Identities = 63/274 (22%), Positives = 101/274 (36%), Gaps = 62/274 (22%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           +ITG ASGIG  TA L  D G  +I I D+++                 V  D++     
Sbjct: 3   VITGAASGIGAATAELLEDAGHTVIGI-DLREA---------------DVIADLSTPEGR 46

Query: 79  KALVDS-TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
            A +     +  G LD + + AG+      TV  L       +  +N  G+ A ++ A  
Sbjct: 47  AAAIADVLARCSGVLDGLVNCAGV---GGTTVAGL-------VLKVNYFGLRALME-ALL 95

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRR---------------------------TDYHMSK 170
             +  G   + V  +S+AG+   + +                             Y  SK
Sbjct: 96  PRLRKGHGPAAVVVSSIAGAGWAQDKLELAKALAAGTEARAVALAEHAGQPGYLAYAGSK 155

Query: 171 HAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEG 227
            A+    R  +       G+RVN V+P  + TP+       P   + V+    P     G
Sbjct: 156 EALTVWTRRRAATWLYGAGVRVNTVAPGPVETPILQAFLQDPRGGESVDAFVTPM----G 211

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                  +A  + FLA   + ++ G +L VDGG 
Sbjct: 212 RRAEPDEIAPVIAFLASDAASWINGANLFVDGGL 245

Bacterial 3-alpha_HSD, which catalyzes the NAD-dependent oxidoreduction of hydroxysteroids, is a dimeric member of the classical SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|181044 PRK07577, PRK07577, short chain dehydrogenase; Provisional

 Score = 80.5 bits (199), Expect = 3e-18
 Identities = 69/250 (27%), Positives = 112/250 (44%), Gaps = 21/250 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA--DIQDELGRQVATSIGVGKCHYVHC 70
           +  +  ++TG   GIG   +   A+ G ++I IA   I D  G   A            C
Sbjct: 1   MSSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDFPGELFA------------C 48

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+ +  Q  A +    + +  +D + +N GI  +  Q +  +D +A   ++ +NVR    
Sbjct: 49  DLADIEQTAATLAQINEIHP-VDAIVNNVGI--ALPQPLGKIDLAALQDVYDLNVRAAVQ 105

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +     M     +G IV   S A   G   RT Y  +K A++G  R+ +++L  +GI 
Sbjct: 106 VTQAFLEGMKLRE-QGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGIT 163

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V+P  + T L      + ++E EK      P+  +      VA A+ FL   D+ F+
Sbjct: 164 VNAVAPGPIETELFRQTRPVGSEE-EKRVLASIPMRRLG-TPEEVAAAIAFLLSDDAGFI 221

Query: 251 TGHDLVVDGG 260
           TG  L VDGG
Sbjct: 222 TGQVLGVDGG 231

Length = 234

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 81.5 bits (201), Expect = 3e-18
 Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 12/211 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADI-QDELGRQVATSIGVG-KCHYVHC 70
             G+ A+ITGGASGIG  T   FA  GAR +V+ D+ +  L + V      G   H V C
Sbjct: 4   FPGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMC 62

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +  +V  L D   +  G +D++FSNAGI+      ++++    +  +  +++ G   
Sbjct: 63  DVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGG--PIVEMTHDDWRWVIDVDLWGSIH 120

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            V+     ++E G  G +V TAS AG         Y ++K+ V+GL  + + ++   GI 
Sbjct: 121 TVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIG 180

Query: 191 VNCVSPHGLATPLTCH-------AYGMPADE 214
           V+ + P  + T L  +       A    +  
Sbjct: 181 VSVLCPMVVETNLVANSERIRGAACAQSSTT 211

Length = 275

>gnl|CDD|187664 cd09763, DHRS1-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) -like, classical (c) SDRs

 Score = 80.6 bits (199), Expect = 6e-18
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 16/202 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA-DIQDELGRQVATSIGV--GKCHYVH 69
           L GK+A++TG + GIG   A    + GA + +    I  +L    A  I    GKC  V 
Sbjct: 1   LSGKIALVTGASRGIGRGIALQLGEAGATVYITGRTILPQL-PGTAEEIEARGGKCIPVR 59

Query: 70  CDVTNECQVKAL---VDSTVQNYGQLDIMFSNA-----GILSSSDQTVLDLDFSAFDRLF 121
           CD +++ +V+AL   V    Q  G+LDI+ +NA      IL    +   +   + +D + 
Sbjct: 60  CDHSDDDEVEALFERVAREQQ--GRLDILVNNAYAAVQLILVGVAKPFWEEPPTIWDDIN 117

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            + +R   AC  +AA +MV+ G +G IV  +S  G         Y + K A+  +    +
Sbjct: 118 NVGLRAHYACSVYAAPLMVKAG-KGLIVIISST-GGLEYLFNVAYGVGKAAIDRMAADMA 175

Query: 182 VQLGVHGIRVNCVSPHGLATPL 203
            +L  HG+ V  + P  + T L
Sbjct: 176 HELKPHGVAVVSLWPGFVRTEL 197

This subgroup includes human DHRS1 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 265

>gnl|CDD|183797 PRK12859, PRK12859, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 80.6 bits (199), Expect = 6e-18
 Identities = 67/270 (24%), Positives = 113/270 (41%), Gaps = 35/270 (12%)

Query: 11  NKLEGKVAIITGG--ASGIGETTARLFADHGARMI--------------VIADIQDELGR 54
           N+L+ KVA++TG     GIG    +  A+ GA +               V  D Q +L  
Sbjct: 2   NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQE 61

Query: 55  QVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF 114
           ++  + GV K   +  D+T     K L++   +  G   I+ +NA   +++D + L  + 
Sbjct: 62  ELLKN-GV-KVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAE- 118

Query: 115 SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
              D+ + +NVR         AR   +    G I+   S            Y  +K A+ 
Sbjct: 119 -ELDKHYMVNVRATTLLSSQFAR-GFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAID 176

Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH 234
            L  S + ++   GI VN ++P    T       G   +E+++   P  P      R G 
Sbjct: 177 ALTSSLAAEVAHLGITVNAINPGPTDT-------GWMTEEIKQGLLPMFPFG----RIGE 225

Query: 235 VADA---VLFLACRDSEFVTGHDLVVDGGF 261
             DA   + FLA  ++E++TG  +  +GGF
Sbjct: 226 PKDAARLIKFLASEEAEWITGQIIHSEGGF 255

Length = 256

>gnl|CDD|180604 PRK06523, PRK06523, short chain dehydrogenase; Provisional

 Score = 79.2 bits (196), Expect = 2e-17
 Identities = 67/268 (25%), Positives = 105/268 (39%), Gaps = 35/268 (13%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L GK A++TGG  GIG  T     + GAR++  A       R     +      +V  
Sbjct: 5   LELAGKRALVTGGTKGIGAATVARLLEAGARVVTTA-------RSRPDDL-PEGVEFVAA 56

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+T      A+  + ++  G +DI+    G  S+       L    +     +N+  +AA
Sbjct: 57  DLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNL--LAA 114

Query: 131 CVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRR-------TDYHMSKHAVIGLVRSAS 181
                A +  M+  G  G I+   S+       RR       T Y  +K A+    +S S
Sbjct: 115 VRLDRALLPGMIARG-SGVIIHVTSIQ------RRLPLPESTTAYAAAKAALSTYSKSLS 167

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCH-----AYGMPADEVEKLFEPQTPLEGVVL----RA 232
            ++   G+RVN VSP  + T          A     D           L G+ L      
Sbjct: 168 KEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPLGRPAEP 227

Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGG 260
             VA+ + FLA   +  +TG + V+DGG
Sbjct: 228 EEVAELIAFLASDRAASITGTEYVIDGG 255

Length = 260

>gnl|CDD|187604 cd05346, SDR_c5, classical (c) SDR, subgroup 5

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 61/240 (25%), Positives = 112/240 (46%), Gaps = 25/240 (10%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIA-------DIQDELGRQVATSIGVGKCHYV 68
           K  +ITG +SGIGE TAR FA  GA++I+         ++ DELG +    +       +
Sbjct: 1   KTVLITGASSGIGEATARRFAKAGAKLILTGRRAERLQELADELGAKFPVKV-----LPL 55

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV++   ++A +++  + +  +DI+ +NAG+    D    + D   ++ +   NV+G+
Sbjct: 56  QLDVSDRESIEAALENLPEEFRDIDILVNNAGLALGLD-PAQEADLEDWETMIDTNVKGL 114

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGS---CGGKRRTDYHMSKHAVIGLVRSASVQLG 185
               +    +M+    +G I+   S+AG     GG     Y  +K AV     +    L 
Sbjct: 115 LNVTRLILPIMIARN-QGHIINLGSIAGRYPYAGG---NVYCATKAAVRQFSLNLRKDLI 170

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             GIRV  + P  + T  +   +    ++ +K++E   P     L    +A+ +L++A R
Sbjct: 171 GTGIRVTNIEPGLVETEFSLVRFHGDKEKADKVYEGVEP-----LTPEDIAETILWVASR 225

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|183716 PRK12744, PRK12744, short chain dehydrogenase; Provisional

 Score = 78.6 bits (194), Expect = 3e-17
 Identities = 70/274 (25%), Positives = 117/274 (42%), Gaps = 27/274 (9%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVI----ADIQDELGRQV 56
           MAD S       L+GKV +I GGA  +G   AR  A  GA+ + I    A  + +    V
Sbjct: 1   MADHS-------LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETV 53

Query: 57  ATSIGVG-KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG-ILSSSDQTVLDLDF 114
           A     G K      D+T    V+ L D     +G+ DI  +  G +L      ++++  
Sbjct: 54  AAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLKKP---IVEISE 110

Query: 115 SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
           + +D +FA+N +     +K A R + + G   ++V T+ +         + Y  SK  V 
Sbjct: 111 AEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLV-TSLLGAFTPF--YSAYAGSKAPVE 167

Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG- 233
              R+AS + G  GI V  V P  + TP     Y     E     +    L     + G 
Sbjct: 168 HFTRAASKEFGARGISVTAVGPGPMDTPFF---YPQEGAEAVAYHKTAAAL-SPFSKTGL 223

Query: 234 -HVADAVLFLACRDSE--FVTGHDLVVDGGFLIR 264
             + D V F+    ++  ++TG  ++++GG+  +
Sbjct: 224 TDIEDIVPFIRFLVTDGWWITGQTILINGGYTTK 257

Length = 257

>gnl|CDD|181139 PRK07832, PRK07832, short chain dehydrogenase; Provisional

 Score = 78.2 bits (193), Expect = 5e-17
 Identities = 54/192 (28%), Positives = 79/192 (41%), Gaps = 6/192 (3%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCH-YVHCDV 72
           K   +TG ASGIG  TA   A  GA  + + D   +   Q         G    +   D+
Sbjct: 1   KRCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDI 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++   V A        +G +D++ + AGI  S+  TV  L    + R+  +N+ G    +
Sbjct: 60  SDYDAVAAFAADIHAAHGSMDVVMNIAGI--SAWGTVDRLTHEQWRRMVDVNLMGPIHVI 117

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +     MV  G  G +V  +S AG         Y  SK  + GL       L  HGI V+
Sbjct: 118 ETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVS 177

Query: 193 CVSPHGLATPLT 204
            V P  + TPL 
Sbjct: 178 VVVPGAVKTPLV 189

Length = 272

>gnl|CDD|183772 PRK12823, benD, 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

 Score = 77.7 bits (192), Expect = 5e-17
 Identities = 77/281 (27%), Positives = 120/281 (42%), Gaps = 52/281 (18%)

Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKC 65
               +  GKV ++TG A GIG   A   A  GAR +V+ D + EL  +VA  +    G+ 
Sbjct: 1   MMNQRFAGKVVVVTGAAQGIGRGVALRAAAEGAR-VVLVD-RSELVHEVAAELRAAGGEA 58

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILS------SSDQTVLDLDFSAF 117
             +  D+      +A + + V+ +G++D++ +N G  I +        +Q   ++  S F
Sbjct: 59  LALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLF 118

Query: 118 DRLFAINVRGMAACVKHAA-RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
             L+         C   A    M+  G  G+IV  +S+A    G  R  Y  +K  V  L
Sbjct: 119 PTLW--------CC--RAVLPHMLAQG-GGAIVNVSSIA--TRGINRVPYSAAKGGVNAL 165

Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE-----GVV-- 229
             S + +   HGIRVN V+P G            P   V +   PQ+  E      +V  
Sbjct: 166 TASLAFEYAEHGIRVNAVAPGGTEA---------PPRRVPRNAAPQSEQEKAWYQQIVDQ 216

Query: 230 -------LRAGHV---ADAVLFLACRDSEFVTGHDLVVDGG 260
                   R G +     A+LFLA  ++ ++TG  L V GG
Sbjct: 217 TLDSSLMKRYGTIDEQVAAILFLASDEASYITGTVLPVGGG 257

Length = 260

>gnl|CDD|171820 PRK12936, PRK12936, 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

 Score = 77.6 bits (191), Expect = 5e-17
 Identities = 66/258 (25%), Positives = 118/258 (45%), Gaps = 24/258 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFAD-------HGARMIVIADIQDELGRQVATSIGVGKC 65
           L G+ A++TG + GIGE  ARL          HG R+  +  +  ELG +V         
Sbjct: 4   LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKI------- 56

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
                ++++  +VKAL      +   +DI+ +NAGI  + D   + +    +D +  +N+
Sbjct: 57  --FPANLSDRDEVKALGQKAEADLEGVDILVNNAGI--TKDGLFVRMSDEDWDSVLEVNL 112

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
                  +     M+     G I+   SV G  G   + +Y  SK  +IG  +S + ++ 
Sbjct: 113 TATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIA 171

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
              + VNCV+P  + + +T    G   D+ ++      P++ +      VA AV +LA  
Sbjct: 172 TRNVTVNCVAPGFIESAMT----GKLNDKQKEAIMGAIPMKRMG-TGAEVASAVAYLASS 226

Query: 246 DSEFVTGHDLVVDGGFLI 263
           ++ +VTG  + V+GG  +
Sbjct: 227 EAAYVTGQTIHVNGGMAM 244

Length = 245

>gnl|CDD|181417 PRK08416, PRK08416, 7-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 77.9 bits (192), Expect = 6e-17
 Identities = 71/270 (26%), Positives = 116/270 (42%), Gaps = 31/270 (11%)

Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVI----ADIQDELGRQVATSIGVG 63
           N  N+++GK  +I+GG  GIG+     FA  G  +        +  +++   +    G+ 
Sbjct: 1   NMSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGI- 59

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL--- 120
           K      ++      K L     +++ ++D   SNA I   S + V+   ++ F RL   
Sbjct: 60  KAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAII---SGRAVVG-GYTKFMRLKPK 115

Query: 121 -----FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
                +   V       + AA+ M + G  GSI+  +S       +    +  SK AV  
Sbjct: 116 GLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIENYAGHGTSKAAVET 174

Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAG 233
           +V+ A+ +LG   IRVN VS      P+   A     +  EV+   E  +PL     R G
Sbjct: 175 MVKYAATELGEKNIRVNAVS----GGPIDTDALKAFTNYEEVKAKTEELSPLN----RMG 226

Query: 234 H---VADAVLFLACRDSEFVTGHDLVVDGG 260
               +A A LFL    + ++TG  +VVDGG
Sbjct: 227 QPEDLAGACLFLCSEKASWLTGQTIVVDGG 256

Length = 260

>gnl|CDD|183718 PRK12746, PRK12746, short chain dehydrogenase; Provisional

 Score = 75.5 bits (185), Expect = 3e-16
 Identities = 70/261 (26%), Positives = 118/261 (45%), Gaps = 20/261 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV----IADIQDELGRQVATSIGVGKCHYV 68
           L+GKVA++TG + GIG   A   A+ GA + +         DE  R++ ++   GK   +
Sbjct: 4   LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN--GGKAFLI 61

Query: 69  HCDVTNECQVKALVDSTVQNY------GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
             D+ +   VK LV+             ++DI+ +NAGI   +  T+ +     FD + A
Sbjct: 62  EADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGI--GTQGTIENTTEEIFDEIMA 119

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           +N++     ++    ++      G ++  +S     G      Y +SK A+  +    + 
Sbjct: 120 VNIKAPFFLIQQTLPLL---RAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAK 176

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
            LG  GI VN + P    T +       P  E+   F   + + G + +   +ADAV FL
Sbjct: 177 HLGERGITVNTIMPGYTKTDINAKLLDDP--EIRN-FATNSSVFGRIGQVEDIADAVAFL 233

Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
           A  DS +VTG  + V GGF +
Sbjct: 234 ASSDSRWVTGQIIDVSGGFCL 254

Length = 254

>gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional

 Score = 77.7 bits (192), Expect = 3e-16
 Identities = 53/184 (28%), Positives = 84/184 (45%), Gaps = 24/184 (13%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT--SIGVGKCHY 67
           +  L GKV +ITG +SGIG  TA   A+ GA + ++A   + L   VA   + G G  H 
Sbjct: 366 RGPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKG-GTAHA 424

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG------ILSSSDQTVLDLDFSAFDRLF 121
             CD+T+   V   V   +  +G +D + +NAG      + +S+D+      F  ++R  
Sbjct: 425 YTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDR------FHDYERTM 478

Query: 122 AIN----VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
           A+N    VR +   + H    M E    G +V  +S+       R + Y  SK A+    
Sbjct: 479 AVNYFGAVRLILGLLPH----MRERR-FGHVVNVSSIGVQTNAPRFSAYVASKAALDAFS 533

Query: 178 RSAS 181
             A+
Sbjct: 534 DVAA 537

Length = 657

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 75.1 bits (185), Expect = 5e-16
 Identities = 70/288 (24%), Positives = 113/288 (39%), Gaps = 71/288 (24%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT---SIGVGKCHYVH 69
           LEG+VA++TGG+SGIG  T  L  + GA + +    ++ L    A         +     
Sbjct: 6   LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAAR 65

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLD-----LDFSAFDRLFA 122
           CDV +E  V A   +    +G +D++ +NAG   +S+   T  D     L+   F  +  
Sbjct: 66  CDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINP 125

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM-----SKHAVIGLV 177
                       A   ++      SIVC  S+        + + HM     ++  ++ LV
Sbjct: 126 TR----------AFLPLLRASAAASIVCVNSLLA-----LQPEPHMVATSAARAGLLNLV 170

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE-----KLFEPQT--------- 223
           +S + +L   G+RVN +              G+    VE     + +E +          
Sbjct: 171 KSLATELAPKGVRVNSIL------------LGL----VESGQWRRRYEARADPGQSWEAW 214

Query: 224 ----------PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                     PL G + R    A A+ FLA   S + TG  + V GGF
Sbjct: 215 TAALARKKGIPL-GRLGRPDEAARALFFLASPLSSYTTGSHIDVSGGF 261

Length = 265

>gnl|CDD|235631 PRK05866, PRK05866, short chain dehydrogenase; Provisional

 Score = 74.4 bits (183), Expect = 1e-15
 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 18/211 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYVH 69
           L GK  ++TG +SGIGE  A  FA  GA ++ +A   D+ D +  ++  + G      V 
Sbjct: 38  LTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDA--MAVP 95

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD-LD-FSAFDRLFAINVRG 127
           CD+++   V ALV    +  G +DI+ +NAG   S  + + + LD +   +R   +N   
Sbjct: 96  CDLSDLDAVDALVADVEKRIGGVDILINNAG--RSIRRPLAESLDRWHDVERTMVLNYYA 153

Query: 128 MAACVKHAARVMVEGGVRGSIVCTAS---VAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
               ++  A  M+E G  G I+  A+   ++ +      + Y+ SK A+  + R    + 
Sbjct: 154 PLRLIRGLAPGMLERG-DGHIINVATWGVLSEAS--PLFSVYNASKAALSAVSRVIETEW 210

Query: 185 GVHGIRVNCVSPHGLATPLTC--HAY-GMPA 212
           G  G+    +    +ATP+     AY G+PA
Sbjct: 211 GDRGVHSTTLYYPLVATPMIAPTKAYDGLPA 241

Length = 293

>gnl|CDD|235725 PRK06179, PRK06179, short chain dehydrogenase; Provisional

 Score = 74.2 bits (183), Expect = 1e-15
 Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 24/190 (12%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT 73
             KVA++TG +SGIG  TA   A  G R+           R  A +  +     +  DVT
Sbjct: 3   NSKVALVTGASSGIGRATAEKLARAGYRVF-------GTSRNPARAAPIPGVELLELDVT 55

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGIL-------SSSDQTVLDLDFSAFDRLFAINVR 126
           ++  V+A VD  +   G++D++ +NAG+        SS  Q            LF  NV 
Sbjct: 56  DDASVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQ---------ALFDTNVF 106

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           G+    +     M   G  G I+  +SV G         Y  SKHAV G   S   ++  
Sbjct: 107 GILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQ 165

Query: 187 HGIRVNCVSP 196
            GIRV+ V P
Sbjct: 166 FGIRVSLVEP 175

Length = 270

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 73.0 bits (179), Expect = 3e-15
 Identities = 70/271 (25%), Positives = 111/271 (40%), Gaps = 33/271 (12%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGKCHYV 68
            A++TG A  IG + A      G R+++         + +  EL  +   S    +    
Sbjct: 3   AAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLS 62

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI-----LSSSDQTVLDLDFSAFD----R 119
           +         +A++D+  + +G+ D++ +NA       L   D      D  + +     
Sbjct: 63  NSATLFSR-CEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAE 121

Query: 120 LFAINVRGMAACVK-HAARVMVEGGV-RG---SIV--CTASVAGSCGGKRRTDYHMSKHA 172
           LF  N       +K  A R        R    SIV  C A       G   T Y M+KHA
Sbjct: 122 LFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLG--FTMYTMAKHA 179

Query: 173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRA 232
           + GL RSA+++L    IRVN V+P     P       MP +  E  +  + PL      A
Sbjct: 180 LEGLTRSAALELAPLQIRVNGVAPGLSLLPD-----AMPFEVQED-YRRKVPLGQREASA 233

Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
             +AD V+FL    ++++TG  + VDGG  +
Sbjct: 234 EQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|236399 PRK09186, PRK09186, flagellin modification protein A; Provisional

 Score = 71.9 bits (177), Expect = 7e-15
 Identities = 58/278 (20%), Positives = 107/278 (38%), Gaps = 54/278 (19%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC-- 70
           L+GK  +ITG    IG    +   + G   ++ ADI  E   ++  S+G           
Sbjct: 2   LKGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESLGKEFKSKKLSLV 60

Query: 71  --DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS-DQTVLDLDFSAFDRLFAINVRG 127
             D+T++  ++  +  + + YG++D   + A   +    +   D+    F+   ++++  
Sbjct: 61  ELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGS 120

Query: 128 ----MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK----RRTDYHMS------KHAV 173
                    K+  +   +GG  G++V  +S+ G    K      T           K  +
Sbjct: 121 SFLFSQQFAKYFKK---QGG--GNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGI 175

Query: 174 IGLVRSASVQLGVHGIRVNCVSPHGL----------ATPLTCHAYGMPADEVEKLFEPQT 223
           I L +  +       IRVNCVSP G+          A    C+  GM             
Sbjct: 176 IHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAFLNAYKKCCNGKGM------------- 222

Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                 L    +   ++FL    S+++TG +++VD GF
Sbjct: 223 ------LDPDDICGTLVFLLSDQSKYITGQNIIVDDGF 254

Length = 256

>gnl|CDD|235935 PRK07109, PRK07109, short chain dehydrogenase; Provisional

 Score = 72.6 bits (179), Expect = 7e-15
 Identities = 60/248 (24%), Positives = 103/248 (41%), Gaps = 40/248 (16%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIA-------DIQDELGRQVATSIGVGK 64
            +  +V +ITG ++G+G  TAR FA  GA+++++A        +  E+      ++    
Sbjct: 5   PIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEAL---- 60

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
              V  DV +   V+A  D   +  G +D   +NA +  +      D+    F R+  + 
Sbjct: 61  --AVVADVADAEAVQAAADRAEEELGPIDTWVNNAMV--TVFGPFEDVTPEEFRRVTEVT 116

Query: 125 ----VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
               V G  A ++H    M     RG+I+   S         ++ Y  +KHA+ G   S 
Sbjct: 117 YLGVVHGTLAALRH----MRPRD-RGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSL 171

Query: 181 SVQLGVHG--IRVNCVSPHGLATPLTCHAYG-MP--ADEVEKLFEPQTPLEGVVLRAGHV 235
             +L   G  + V  V P  + TP    A   +P     V  +++P+            V
Sbjct: 172 RCELLHDGSPVSVTMVQPPAVNTPQFDWARSRLPVEPQPVPPIYQPEV-----------V 220

Query: 236 ADAVLFLA 243
           ADA+L+ A
Sbjct: 221 ADAILYAA 228

Length = 334

>gnl|CDD|237189 PRK12748, PRK12748, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 71.6 bits (176), Expect = 8e-15
 Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 39/271 (14%)

Query: 12  KLEGKVAIITGGA--SGIGETTARLFADHGARMIV-------------IADIQDELGRQV 56
            L  K+A++TG +  +GIG    R  A  G  +               + D +  L ++ 
Sbjct: 2   PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEE 61

Query: 57  ATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
             S GV +C ++  D++       +  +  +  G   I+ +NA    S+   + +L    
Sbjct: 62  IESYGV-RCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNA--AYSTHTRLEELTAEQ 118

Query: 117 FDRLFAINVRG-MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD--YHMSKHAV 173
            D+ +A+NVR  M      A +   +G   G I+   S  G   G    +  Y  +K A+
Sbjct: 119 LDKHYAVNVRATMLLSSAFAKQY--DGKAGGRIINLTS--GQSLGPMPDELAYAATKGAI 174

Query: 174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG 233
               +S + +L   GI VN V+P    T       G   +E++    P+ P      R G
Sbjct: 175 EAFTKSLAPELAEKGITVNAVNPGPTDT-------GWITEELKHHLVPKFPQG----RVG 223

Query: 234 HVADA---VLFLACRDSEFVTGHDLVVDGGF 261
              DA   + FL   +++++TG  +  +GGF
Sbjct: 224 EPVDAARLIAFLVSEEAKWITGQVIHSEGGF 254

Length = 256

>gnl|CDD|180399 PRK06101, PRK06101, short chain dehydrogenase; Provisional

 Score = 71.4 bits (175), Expect = 9e-15
 Identities = 58/196 (29%), Positives = 83/196 (42%), Gaps = 12/196 (6%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC 76
             +ITG  SGIG+  A  +A  G ++I     Q  L      S  +     +  DVT+  
Sbjct: 3   AVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANI---FTLAFDVTDHP 59

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
             KA +          ++   NAG     D   +D    A  R+F +NV G+A C++   
Sbjct: 60  GTKAALSQLPF---IPELWIFNAGDCEYMDDGKVDATLMA--RVFNVNVLGVANCIE-GI 113

Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
           +  +  G R  IV   S+A      R   Y  SK AV    R+  + L   GI V  V P
Sbjct: 114 QPHLSCGHRVVIV--GSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFP 171

Query: 197 HGLATPLT-CHAYGMP 211
             +ATPLT  + + MP
Sbjct: 172 GFVATPLTDKNTFAMP 187

Length = 240

>gnl|CDD|187631 cd05373, SDR_c10, classical (c) SDR, subgroup 10

 Score = 71.3 bits (175), Expect = 9e-15
 Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 5/177 (2%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTN 74
           VA + G   G+G   AR FA  G  + + A  + +L   +   I    G    V  D  +
Sbjct: 1   VAAVVGAGDGLGAAIARRFAAEGFSVALAARREAKLEALLVDIIRDAGGSAKAVPTDARD 60

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
           E +V AL D   +  G L+++  NAG  ++    +L+     F++++ +   G     + 
Sbjct: 61  EDEVIALFDLIEEEIGPLEVLVYNAG--ANVWFPILETTPRVFEKVWEMAAFGGFLAARE 118

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           AA+ M+  G RG+I+ T + A   G      +  +K A+  L +S + +LG  GI V
Sbjct: 119 AAKRMLARG-RGTIIFTGATASLRGRAGFAAFAGAKFALRALAQSMARELGPKGIHV 174

This subgroup resembles the classical SDRs, but has an incomplete match to the canonical glycine rich NAD-binding motif and lacks the typical active site tetrad (instead of the critical active site Tyr, it has Phe, but contains the nearby Lys). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 238

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 77/270 (28%), Positives = 112/270 (41%), Gaps = 40/270 (14%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDE-LGRQVATSI-GVGKCHYV 68
           LEGK  +I G A+   I    A+  A+ GA +      Q E L ++V      +G    +
Sbjct: 4   LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTY--QGERLEKRVEELAEELGSDLVL 61

Query: 69  HCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
            CDVTN+  + AL  +  + +G+LD     I F+    L       LD     F     I
Sbjct: 62  PCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGD---YLDTSREGFLIAMDI 118

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL------- 176
           +     A  K A  +M  G   GSI+ T +  GS     R    +  + V+G+       
Sbjct: 119 SAYSFTALAKAARPLMNNG---GSIL-TLTYLGS----ERV---VPNYNVMGVAKAALEA 167

Query: 177 -VRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEGVVLRAG 233
            VR  +  LG  GIRVN +S    A P+ T  A G+    ++ K  E   PL    +   
Sbjct: 168 SVRYLAADLGKEGIRVNAIS----AGPIRTLAASGIGDFRKMLKENEANAPL-RRNVTIE 222

Query: 234 HVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
            V +   FL    S  +TG  + VD G+ I
Sbjct: 223 EVGNTAAFLLSDLSSGITGEIIYVDSGYHI 252

Length = 259

>gnl|CDD|212492 cd05327, retinol-DH_like_SDR_c_like, retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

 Score = 71.5 bits (176), Expect = 1e-14
 Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 9/117 (7%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHYVHC 70
           GKV +ITG  SGIG+ TAR  A  GA  ++IA   +E G + A  I    G  K   +  
Sbjct: 1   GKVVVITGANSGIGKETARELAKRGAH-VIIACRNEEKGEEAAAEIKKETGNAKVEVIQL 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           D+++   V+   +  +  + +LDI+ +NAGI++   +   D     F+  FA+N  G
Sbjct: 60  DLSSLASVRQFAEEFLARFPRLDILINNAGIMAPPRRLTKD----GFELQFAVNYLG 112

Classical SDR subgroup containing retinol-DHs, LPORs, and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Pchlide reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14, dehydrogenase/reductase SDR family member (DHRS)-12 , -13 and -X (a DHRS on chromosome X), and WWOX (WW domain-containing oxidoreductase), as well as a Neurospora crassa SDR encoded by the blue light inducible bli-4 gene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 269

>gnl|CDD|180744 PRK06914, PRK06914, short chain dehydrogenase; Provisional

 Score = 71.6 bits (176), Expect = 1e-14
 Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 11/188 (5%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIA-----DIQDELGRQVATSIGVGKCHYV 68
             K+AI+TG +SG G  T    A  G    VIA     + Q+ L  Q             
Sbjct: 2   NKKIAIVTGASSGFGLLTTLELAKKGYL--VIATMRNPEKQENLLSQATQLNLQQNIKVQ 59

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DVT++  +       ++  G++D++ +NAG   ++   V ++    + + F  NV G 
Sbjct: 60  QLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAG--YANGGFVEEIPVEEYRKQFETNVFGA 116

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
            +  +     M +    G I+  +S++G  G    + Y  SK+A+ G   S  ++L   G
Sbjct: 117 ISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFG 175

Query: 189 IRVNCVSP 196
           I V  + P
Sbjct: 176 IDVALIEP 183

Length = 280

>gnl|CDD|180984 PRK07454, PRK07454, short chain dehydrogenase; Provisional

 Score = 70.0 bits (172), Expect = 2e-14
 Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 27/235 (11%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVATSIGVGKCHYVHCDVT 73
             A+ITG +SGIG+ TA  FA  G  + ++A  QD L        S GV K      D++
Sbjct: 7   PRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGV-KAAAYSIDLS 65

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           N   +   +   ++ +G  D++ +NAG+  +    +L++  S +  +  +N+  +  C  
Sbjct: 66  NPEAIAPGIAELLEQFGCPDVLINNAGMAYTGP--LLEMPLSDWQWVIQLNLTSVFQCCS 123

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRT-----DYHMSKHAVIGLVRSASVQLGVHG 188
                M   G  G I+  +S+A      R        Y +SK A+    +  + +   HG
Sbjct: 124 AVLPGMRARG-GGLIINVSSIAA-----RNAFPQWGAYCVSKAALAAFTKCLAEEERSHG 177

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           IRV  ++   + TPL         + V+  F+        +L    VA  +L LA
Sbjct: 178 IRVCTITLGAVNTPL------WDTETVQADFD-----RSAMLSPEQVAQTILHLA 221

Length = 241

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 69.5 bits (170), Expect = 4e-14
 Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 12/215 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
           L  ++ ++TG + GIG   A  +A +GA +I++   +++L RQVA  I   G  +  +  
Sbjct: 2   LNDRIILVTGASDGIGREAALTYARYGATVILLGRNEEKL-RQVADHINEEGGRQPQWFI 60

Query: 70  CDVTNEC--QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAINVR 126
            D+        + L      NY +LD +  NAG+L   D   L + +   +  +  +NV 
Sbjct: 61  LDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLG--DVCPLSEQNPQVWQDVXQVNVN 118

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                +  A   ++     GS+V T+S  G  G      Y +SK A  GL +  + +   
Sbjct: 119 -ATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAVSKFATEGLXQVLADEYQQ 177

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
             +RVNC++P G  T +   A+  P ++ +KL  P
Sbjct: 178 RNLRVNCINPGGTRTAMRASAF--PTEDPQKLKTP 210

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|187628 cd05370, SDR_c2, classical (c) SDR, subgroup 2

 Score = 69.3 bits (170), Expect = 4e-14
 Identities = 53/214 (24%), Positives = 80/214 (37%), Gaps = 18/214 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           KL G   +ITGG SGIG   AR F + G  +I+    ++ L         +   H +  D
Sbjct: 2   KLTGNTVLITGGTSGIGLALARKFLEAGNTVIITGRREERLAEAKKE---LPNIHTIVLD 58

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +   V+AL ++ +  Y  LDI+ +NAGI    D      D    D     N+ G    
Sbjct: 59  VGDAESVEALAEALLSEYPNLDILINNAGIQRPIDLRDPASDLDKADTEIDTNLIG---- 114

Query: 132 VKHAARVMVEGGVR---GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
                +  +    +    +IV  +S            Y  +K A+     +   QL   G
Sbjct: 115 PIRLIKAFLPHLKKQPEATIVNVSSGLAFVPMAANPVYCATKAALHSYTLALRHQLKDTG 174

Query: 189 IRVNCVSPHGLATPLT--------CHAYGMPADE 214
           + V  + P  + T L              MP DE
Sbjct: 175 VEVVEIVPPAVDTELHEERRNPDGGTPRKMPLDE 208

Short-chain dehydrogenases/reductases (SDRs, aka Tyrosine-dependent oxidoreductases) are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 228

>gnl|CDD|235914 PRK07041, PRK07041, short chain dehydrogenase; Provisional

 Score = 68.5 bits (168), Expect = 7e-14
 Identities = 67/245 (27%), Positives = 98/245 (40%), Gaps = 22/245 (8%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           ++ GG+SGIG   AR FA  GAR+ + +  +D L        G         D+T+E  V
Sbjct: 1   LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAV 60

Query: 79  KALVDSTVQNYGQLD-IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
            A         G  D ++ + A         V  L  +A          G A  V  AAR
Sbjct: 61  DAF----FAEAGPFDHVVITAADTPGGP---VRALPLAAAQAAMDSKFWG-AYRVARAAR 112

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH 197
           +       GS+   +  A                A+  L R  +++L    +RVN VSP 
Sbjct: 113 I----APGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELA--PVRVNTVSPG 166

Query: 198 GLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL 255
            + TPL      +  D  E +F    +      V +   VA+A+LFLA   + F TG  +
Sbjct: 167 LVDTPLWS---KLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLA--ANGFTTGSTV 221

Query: 256 VVDGG 260
           +VDGG
Sbjct: 222 LVDGG 226

Length = 230

>gnl|CDD|187586 cd05325, carb_red_sniffer_like_SDR_c, carbonyl reductase sniffer-like, classical (c) SDRs

 Score = 68.1 bits (167), Expect = 1e-13
 Identities = 56/213 (26%), Positives = 88/213 (41%), Gaps = 17/213 (7%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC--HYVHCDVTNE 75
            +ITG + GIG    R     G    VIA  +D        ++G      H +  DVT+E
Sbjct: 1   VLITGASRGIGLELVRQLLARGNN-TVIATCRDPSAATELAALGASHSRLHILELDVTDE 59

Query: 76  CQ--VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
                +A+  +       LD++ +NAGIL S      ++D      +F +NV G     +
Sbjct: 60  IAESAEAV--AERLGDAGLDVLINNAGILHSYG-PASEVDSEDLLEVFQVNVLGPLLLTQ 116

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRR---TDYHMSKHAVIGLVRSASVQLGVHGIR 190
            A   ++  G R  I+  +S  GS G         Y  SK A+  L +S +V+L   GI 
Sbjct: 117 -AFLPLLLKGARAKIINISSRVGSIGDNTSGGWYSYRASKAALNMLTKSLAVELKRDGIT 175

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           V  + P  + T +     G P  + +    P+ 
Sbjct: 176 VVSLHPGWVRTDM-----GGPFAKNKGPITPEE 203

Sniffer is an NADPH-dependent carbonyl reductase of the classical SDR family. Studies in Drosophila melanogaster implicate Sniffer in the prevention of neurodegeneration due to aging and oxidative-stress. This subgroup also includes Rhodococcus sp. AD45 IsoH, which is an NAD-dependent 1-hydroxy-2-glutathionyl-2-methyl-3-butene dehydrogenase involved in isoprene metabolism, Aspergillus nidulans StcE encoded by a gene which is part of a proposed sterigmatocystin biosynthesis gene cluster, Bacillus circulans SANK 72073 BtrF encoded by a gene found in the butirosin biosynthesis gene cluster, and Aspergillus parasiticus nor-1 involved in the biosynthesis of aflatoxins. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 233

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 33/263 (12%)

Query: 15  GKVAIITGGAS--GIGETTARLFADHGARMIV--IADIQDELGRQVATSIGVGKCHYVHC 70
           GK  +ITG A+   I    A+   + GA +      +   +   ++A  +G      + C
Sbjct: 1   GKRILITGIANDRSIAWGIAKALHEAGAELAFTYQPEALRKRVEKLAERLG-ESALVLPC 59

Query: 71  DVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
           DV+N+ ++K L     +++G+LD     I F+            LD     F +   I+ 
Sbjct: 60  DVSNDEEIKELFAEVKKDWGKLDGLVHSIAFAPK---VQLKGPFLDTSRKGFLKALDISA 116

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH---MS--KHAVIGLVRSA 180
             + +  K A  +M  GG   SIV  + +        R       M   K A+   VR  
Sbjct: 117 YSLVSLAKAALPIMNPGG---SIVTLSYLGS-----ERVVPGYNVMGVAKAALESSVRYL 168

Query: 181 SVQLGVHGIRVNCVSPHGLATPL-TCHAYGMPA-DEVEKLFEPQTPLEGVVLRAGHVADA 238
           + +LG  GIRVN +S    A P+ T  A G+   D++ +  E + PL   V  A  V + 
Sbjct: 169 AYELGRKGIRVNAIS----AGPIKTLAASGITGFDKMLEYSEQRAPLGRNVT-AEEVGNT 223

Query: 239 VLFLACRDSEFVTGHDLVVDGGF 261
             FL    S  +TG  + VDGG+
Sbjct: 224 AAFLLSDLSSGITGEIIYVDGGY 246

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180448 PRK06182, PRK06182, short chain dehydrogenase; Validated

 Score = 68.4 bits (168), Expect = 1e-13
 Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 16/191 (8%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           KVA++TG +SGIG+ TAR  A  G  +   A   D++    +  +     H +  DVT+E
Sbjct: 4   KVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGV-----HPLSLDVTDE 58

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             +KA VD+ +   G++D++ +NAG    S   + D+      R F +N+ G A   +  
Sbjct: 59  ASIKAAVDTIIAEEGRIDVLVNNAGY--GSYGAIEDVPIDEARRQFEVNLFGAARLTQLV 116

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTD----YHMSKHAVIGLVRSASVQLGVHGIRV 191
              M      G I+  +S+    GGK  T     YH +K A+ G   +  +++   GI V
Sbjct: 117 LPHMRAQR-SGRIINISSM----GGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDV 171

Query: 192 NCVSPHGLATP 202
             + P G+ T 
Sbjct: 172 VVIEPGGIKTE 182

Length = 273

>gnl|CDD|181349 PRK08278, PRK08278, short chain dehydrogenase; Provisional

 Score = 68.0 bits (167), Expect = 2e-13
 Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 12/133 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR------QVATSI---GVG 63
           L GK   ITG + GIG   A   A  GA +++ A   +   +        A  I   G G
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAG-G 62

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
           +   +  DV +E QV A V   V+ +G +DI  +NA  ++ +     D     FD +  I
Sbjct: 63  QALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINLT--GTEDTPMKRFDLMQQI 120

Query: 124 NVRGMAACVKHAA 136
           NVRG     +   
Sbjct: 121 NVRGTFLVSQACL 133

Length = 273

>gnl|CDD|235736 PRK06196, PRK06196, oxidoreductase; Provisional

 Score = 68.6 bits (168), Expect = 2e-13
 Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 30/211 (14%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L GK AI+TGG SG+G  T R  A  GA +IV A  + ++ R+     G+     V  D+
Sbjct: 24  LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPAR-RPDVAREALA--GIDGVEVVMLDL 80

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +   V+A  +  + +  ++DI+ +NAG+++  +  V D     ++  FA N  G  A V
Sbjct: 81  ADLESVRAFAERFLDSGRRIDILINNAGVMACPETRVGD----GWEAQFATNHLGHFALV 136

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS---------KHAVIGLVRSASVQ 183
                 +  G   G+ V    VA S  G RR+              K    G  ++A+  
Sbjct: 137 NLLWPALAAGA--GARV----VALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANAL 190

Query: 184 LGVH--------GIRVNCVSPHGLATPLTCH 206
             VH        G+R   V P G+ TPL  H
Sbjct: 191 FAVHLDKLGKDQGVRAFSVHPGGILTPLQRH 221

Length = 315

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 67.6 bits (166), Expect = 2e-13
 Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 25/229 (10%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKC 65
             + L+ ++ ++TG   GIG   A  +A HGA +I++   +++L   V   I   G  + 
Sbjct: 6   KPDLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKL-EAVYDEIEAAGGPQP 64

Query: 66  HYVHCDV----TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD-LDFSAFDRL 120
             +  D+        Q   L D+  + +G+LD +  NAG+L   +   ++  D   +  +
Sbjct: 65  AIIPLDLLTATPQNYQ--QLADTIEEQFGRLDGVLHNAGLL--GELGPMEQQDPEVWQDV 120

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT---DYHMSKHAVIGLV 177
             +NV       +    ++++     S+V T+S   S G + R     Y +SK A  G++
Sbjct: 121 MQVNVNATFMLTQALLPLLLKSP-AASLVFTSS---SVGRQGRANWGAYAVSKFATEGMM 176

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE 226
           +  + +     +RVNC++P G  T +   A+  P ++ +KL   +TP +
Sbjct: 177 QVLADEYQGTNLRVNCINPGGTRTAMRASAF--PGEDPQKL---KTPED 220

Length = 247

>gnl|CDD|187656 cd08953, KR_2_SDR_x, ketoreductase (KR), subgroup 2, complex (x) SDRs

 Score = 68.2 bits (167), Expect = 3e-13
 Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 14/160 (8%)

Query: 14  EGKVAIITGGASGIGETTARLFADH-GARMIVI------ADIQDELGRQVATSIGVGKCH 66
            G V ++TGGA GIG   AR  A   GAR++++       + + +     A      +  
Sbjct: 204 PGGVYLVTGGAGGIGRALARALARRYGARLVLLGRSPLPPEEEWKAQTLAALEALGARVL 263

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
           Y+  DVT+   V+ L++   + YG +D +   AG+L   D  +       F+ + A  V 
Sbjct: 264 YISADVTDAAAVRRLLEKVRERYGAIDGVIHAAGVL--RDALLAQKTAEDFEAVLAPKVD 321

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY 166
           G+    +  A   ++       V  +SV+   GG  + DY
Sbjct: 322 GLLNLAQALADEPLD-----FFVLFSSVSAFFGGAGQADY 356

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes both KR domains of the Bacillus subtilis Pks J,-L, and PksM, and all three KR domains of PksN, components of the megacomplex bacillaene synthase, which synthesizes the antibiotic bacillaene. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 436

>gnl|CDD|236056 PRK07576, PRK07576, short chain dehydrogenase; Provisional

 Score = 66.5 bits (163), Expect = 5e-13
 Identities = 74/272 (27%), Positives = 111/272 (40%), Gaps = 51/272 (18%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY-VHC 70
              GK  ++ GG SGI    A+ FA  GA + V +  Q+++   VA     G     V  
Sbjct: 6   DFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSA 65

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNA---------GILSSSDQTVLDLDFSAFDRLF 121
           DV +   V+A        +G +D++ S A         G+ ++  +TV+D+D      L 
Sbjct: 66  DVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDL-----LG 120

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA------VIG 175
             NV  + A      R    G     I  +A  A            M  H       V  
Sbjct: 121 TFNV--LKAAYPLLRR---PGASIIQI--SAPQAF-------VPMPMQAHVCAAKAGVDM 166

Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLR 231
           L R+ +++ G  GIRVN + P  +A        GM    P+ E++       PL+    R
Sbjct: 167 LTRTLALEWGPEGIRVNSIVPGPIAG-----TEGMARLAPSPELQAAVAQSVPLK----R 217

Query: 232 AG---HVADAVLFLACRDSEFVTGHDLVVDGG 260
            G    +A+A LFLA   + ++TG  L VDGG
Sbjct: 218 NGTKQDIANAALFLASDMASYITGVVLPVDGG 249

Length = 264

>gnl|CDD|235608 PRK05786, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 65.9 bits (161), Expect = 7e-13
 Identities = 56/250 (22%), Positives = 109/250 (43%), Gaps = 18/250 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GK   I G + G+G   A      GA++ + +  +++L R   T    G  HYV  D
Sbjct: 2   RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGD 61

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V++    + +++   +    +D +    G     + TV   +FS  + +   +++     
Sbjct: 62  VSSTESARNVIEKAAKVLNAIDGLVVTVG--GYVEDTV--EEFSGLEEMLTNHIKIPLYA 117

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           V  + R + EG    SIV  +S++G       +  Y ++K  +   V   + +L   GIR
Sbjct: 118 VNASLRFLKEG---SSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIR 174

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN ++P  ++             ++ KL +   P E         A  +++L   ++++V
Sbjct: 175 VNGIAPTTISGDFEP---ERNWKKLRKLGDDMAPPE-------DFAKVIIWLLTDEADWV 224

Query: 251 TGHDLVVDGG 260
            G  + VDGG
Sbjct: 225 DGVVIPVDGG 234

Length = 238

>gnl|CDD|180669 PRK06720, PRK06720, hypothetical protein; Provisional

 Score = 64.6 bits (157), Expect = 7e-13
 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 5/95 (5%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA---TSIGVGKCH 66
           K KL GKVAI+TGG  GIG  TA L A  GA++IV  DI  E G+      T++G G+  
Sbjct: 11  KMKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIV-TDIDQESGQATVEEITNLG-GEAL 68

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI 101
           +V  D+  +   + ++  T+  + ++D++F NAG+
Sbjct: 69  FVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGL 103

Length = 169

>gnl|CDD|181077 PRK07677, PRK07677, short chain dehydrogenase; Provisional

 Score = 65.5 bits (160), Expect = 1e-12
 Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 34/262 (12%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDV 72
            KV IITGG+SG+G+  A+ FA+ GA +++    +++L  +    I    G+   V  DV
Sbjct: 1   EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKL-EEAKLEIEQFPGQVLTVQMDV 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            N   V+ +V+   + +G++D + +NA    +  ++    DL  + ++ +  I + G   
Sbjct: 60  RNPEDVQKMVEQIDEKFGRIDALINNAAGNFICPAE----DLSVNGWNSVIDIVLNGTFY 115

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV-HGI 189
           C +   +  +E G++G+I+   +      G        +K  V+ + R+ +V+ G  +GI
Sbjct: 116 CSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGI 175

Query: 190 RVNCVSPHGLATPLTCHAYGMPADE---VEKLFEPQTP----LEGVVL-RAG---HVADA 238
           RVN ++P              P +     +KL+E +      ++ V L R G    +A  
Sbjct: 176 RVNAIAPG-------------PIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAGL 222

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
             FL   ++ ++ G  + +DGG
Sbjct: 223 AYFLLSDEAAYINGTCITMDGG 244

Length = 252

>gnl|CDD|183719 PRK12747, PRK12747, short chain dehydrogenase; Provisional

 Score = 64.7 bits (157), Expect = 3e-12
 Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 16/256 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+GKVA++TG + GIG   A+  A+ GA + +    + E   +    I    G    +  
Sbjct: 2   LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGA 61

Query: 71  DVTNECQVKAL---VDSTVQNY---GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
           ++ +   V+AL   +D+ +QN     + DI+ +NAGI       + +     FDR+ ++N
Sbjct: 62  NLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI--GPGAFIEETTEQFFDRMVSVN 119

Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
            +     ++ A   + +      I+  +S A          Y M+K A+  +  + + QL
Sbjct: 120 AKAPFFIIQQALSRLRDN---SRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQL 176

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           G  GI VN + P  + T +      + +D + K +         +     +AD   FLA 
Sbjct: 177 GARGITVNAILPGFIKTDMNAE---LLSDPMMKQYATTISAFNRLGEVEDIADTAAFLAS 233

Query: 245 RDSEFVTGHDLVVDGG 260
            DS +VTG  + V GG
Sbjct: 234 PDSRWVTGQLIDVSGG 249

Length = 252

>gnl|CDD|212497 cd11731, Lin1944_like_SDR_c, Lin1944 and related proteins, classical (c) SDRs

 Score = 63.8 bits (156), Expect = 3e-12
 Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 36/211 (17%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ 77
            I+ G    IG   A+L + HG  +I       +                   D+T+E  
Sbjct: 1   IIVIGATGTIGLAVAQLLSAHGHEVITAGRSSGD----------------YQVDITDEAS 44

Query: 78  VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
           +KAL +      G  D + S AG    +     +L  + F R     + G    V+H   
Sbjct: 45  IKALFEKV----GHFDAIVSTAGDAEFAPLA--ELTDADFQRGLNSKLLGQINLVRHGLP 98

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH 197
            + +G   GSI  T+ +                 A+ G VR+A+++L   GIR+N VSP 
Sbjct: 99  YLNDG---GSITLTSGILAQRPIPGGAAAATVNGALEGFVRAAAIEL-PRGIRINAVSPG 154

Query: 198 GLATPLTCHAYG--------MPADEVEKLFE 220
            +   L   AYG        +PA++V K + 
Sbjct: 155 VVEESL--EAYGDFFPGFEPVPAEDVAKAYV 183

Lin1944 protein from Listeria Innocua is a classical SDR, it contains a glycine-rich motif similar to the canonical motif of the SDR NAD(P)-binding site. However, the typical SDR active site residues are absent in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 198

>gnl|CDD|235713 PRK06139, PRK06139, short chain dehydrogenase; Provisional

 Score = 64.7 bits (158), Expect = 5e-12
 Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 1/94 (1%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHY 67
               L G V +ITG +SGIG+ TA  FA  GAR+++ A  ++ L         +G +   
Sbjct: 1   MMGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLV 60

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI 101
           V  DVT+  QVKAL        G++D+  +N G+
Sbjct: 61  VPTDVTDADQVKALATQAASFGGRIDVWVNNVGV 94

Length = 330

>gnl|CDD|187625 cd05367, SPR-like_SDR_c, sepiapterin reductase (SPR)-like, classical (c) SDRs

 Score = 63.5 bits (155), Expect = 5e-12
 Identities = 28/143 (19%), Positives = 61/143 (42%), Gaps = 3/143 (2%)

Query: 17  VAIITGGASGIGETTARLFA--DHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
           V I+TG + GIG   A         + ++++A  ++ L           +   V  D+++
Sbjct: 1   VIILTGASRGIGRALAEELLKRGSPSVVVLLARSEEPLQELKEELRPGLRVTTVKADLSD 60

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
              V+ L+++  +  G+ D++ +NAG L      +  +D     + F +N+         
Sbjct: 61  AAGVEQLLEAIRKLDGERDLLINNAGSLGPV-SKIEFIDLDELQKYFDLNLTSPVCLTST 119

Query: 135 AARVMVEGGVRGSIVCTASVAGS 157
             R   + G++ ++V  +S A  
Sbjct: 120 LLRAFKKRGLKKTVVNVSSGAAV 142

Human SPR, a member of the SDR family, catalyzes the NADP-dependent reduction of sepiaptern to 7,8-dihydrobiopterin (BH2). In addition to SPRs, this subgroup also contains Bacillus cereus yueD, a benzil reductase, which catalyzes the stereospecific reduction of benzil to (S)-benzoin. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 241

>gnl|CDD|180949 PRK07370, PRK07370, enoyl-(acyl carrier protein) reductase; Validated

 Score = 63.2 bits (154), Expect = 9e-12
 Identities = 78/271 (28%), Positives = 121/271 (44%), Gaps = 39/271 (14%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGR----------QVATSI 60
           L GK A++TG A+   I    A+     GA  + I  + DE GR           +  S+
Sbjct: 4   LTGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSL 62

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA---- 116
                 ++ CDV ++ Q++   ++  Q +G+LDI+      L+ + +  L  DFSA    
Sbjct: 63  ------FLPCDVQDDAQIEETFETIKQKWGKLDILVH---CLAFAGKEELIGDFSATSRE 113

Query: 117 -FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            F R   I+   +A   K A  +M EG   GSIV T +  G  G +   +Y++   A   
Sbjct: 114 GFARALEISAYSLAPLCKAAKPLMSEG---GSIV-TLTYLG--GVRAIPNYNVMGVAKAA 167

Query: 176 L---VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRA 232
           L   VR  + +LG   IRVN +S   + T L   A G   D +  + E + PL   V + 
Sbjct: 168 LEASVRYLAAELGPKNIRVNAISAGPIRT-LASSAVGGILDMIHHV-EEKAPLRRTVTQT 225

Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
             V +   FL    +  +TG  + VD G+ I
Sbjct: 226 -EVGNTAAFLLSDLASGITGQTIYVDAGYCI 255

Length = 258

>gnl|CDD|180446 PRK06180, PRK06180, short chain dehydrogenase; Provisional

 Score = 62.6 bits (153), Expect = 2e-11
 Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 9/190 (4%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT 73
             K  +ITG +SG G   A+     G R  V+  ++ E  R    ++   +      DVT
Sbjct: 3   SMKTWLITGVSSGFGRALAQAALAAGHR--VVGTVRSEAARADFEALHPDRALARLLDVT 60

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +   + A+V      +G +D++ +NAG     + +++ L        R F +NV G  A 
Sbjct: 61  DFDAIDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLA----EMRRQFEVNVFGAVAM 116

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K     M     RG IV   S+ G         Y  SK A+ G+  S + ++   GI V
Sbjct: 117 TKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHV 175

Query: 192 NCVSPHGLAT 201
             V P    T
Sbjct: 176 TAVEPGSFRT 185

Length = 277

>gnl|CDD|130890 TIGR01831, fabG_rel, 3-oxoacyl-(acyl-carrier-protein) reductase, putative

 Score = 61.1 bits (148), Expect = 3e-11
 Identities = 59/248 (23%), Positives = 103/248 (41%), Gaps = 14/248 (5%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNEC 76
           ++TG + GIG   A   A  G  + V           V ++I    G    +  DV +  
Sbjct: 2   LVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRV 61

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
             + L+++ +  +G    +  NAGI  + D     L    +D +   N+ G    +    
Sbjct: 62  ACRTLLEADIAEHGAYYGVVLNAGI--TRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCT 119

Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
             M+     G I+  ASV+G  G + + +Y  +K  +IG  ++ +V+L    I VNC++P
Sbjct: 120 MPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAP 179

Query: 197 HGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD 254
             + T        M A+    L E     P+  +  +   VA    FL    + +VT   
Sbjct: 180 GLIDT-------EMLAEVEHDLDEALKTVPMNRMG-QPAEVASLAGFLMSDGASYVTRQV 231

Query: 255 LVVDGGFL 262
           + V+GG +
Sbjct: 232 ISVNGGMV 239

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187663 cd09762, HSDL2_SDR_c, human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 61.3 bits (149), Expect = 3e-11
 Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 10/129 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------GK 64
           L GK   ITG + GIG+  A   A  GA +++ A   +   +   T            GK
Sbjct: 1   LAGKTLFITGASRGIGKAIALKAARDGANVVIAAKTAEPHPKLPGTIYTAAEEIEAAGGK 60

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
                 D+ +E QV+A V+  V+ +G +DI+ +NA  +S +    LD     +D +  +N
Sbjct: 61  ALPCIVDIRDEDQVRAAVEKAVEKFGGIDILVNNASAISLTG--TLDTPMKRYDLMMGVN 118

Query: 125 VRGMAACVK 133
            RG   C K
Sbjct: 119 TRGTYLCSK 127

This subgroup includes human HSDL2 and related protens. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|235703 PRK06125, PRK06125, short chain dehydrogenase; Provisional

 Score = 61.2 bits (149), Expect = 5e-11
 Identities = 74/269 (27%), Positives = 111/269 (41%), Gaps = 40/269 (14%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVG-KCHY 67
            L GK  +ITG + GIG   A  FA  G  + ++A   D L      +  + GV    H 
Sbjct: 4   HLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHA 63

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  D+++    + L        G +DI+ +NAG +      + D+D +A+   + + V G
Sbjct: 64  L--DLSSPEAREQLAAE----AGDIDILVNNAGAIPGG--GLDDVDDAAWRAGWELKVFG 115

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY---HMSKHAVIGLVRSASVQL 184
                + A   M   G  G IV   +V G+ G     DY        A++   R+   + 
Sbjct: 116 YIDLTRLAYPRMKARG-SGVIV---NVIGAAGENPDADYICGSAGNAALMAFTRALGGKS 171

Query: 185 GVHGIRVNCVSPHGLATP-----LTCHAYGMPADEV--EKLFE------PQTPLEGVVLR 231
              G+RV  V+P  +AT      L   A     DE   ++L        P TP E     
Sbjct: 172 LDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEE----- 226

Query: 232 AGHVADAVLFLACRDSEFVTGHDLVVDGG 260
              VAD V FLA   S + +G  + VDGG
Sbjct: 227 ---VADLVAFLASPRSGYTSGTVVTVDGG 252

Length = 259

>gnl|CDD|171822 PRK12938, PRK12938, acetyacetyl-CoA reductase; Provisional

 Score = 60.8 bits (147), Expect = 5e-11
 Identities = 65/260 (25%), Positives = 107/260 (41%), Gaps = 34/260 (13%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIV-----------IADIQDELGRQVATSIGVGK 64
           ++A +TGG  GIG +  +     G +++              + Q  LG     S G   
Sbjct: 4   RIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEG--- 60

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
                 +V +    KA  D      G++D++ +NAGI  + D     +    +  +   N
Sbjct: 61  ------NVGDWDSTKAAFDKVKAEVGEIDVLVNNAGI--TRDVVFRKMTREDWTAVIDTN 112

Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           +  +    K     MVE G  G I+  +SV G  G   +T+Y  +K  + G   S + ++
Sbjct: 113 LTSLFNVTKQVIDGMVERGW-GRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 171

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLF 241
              G+ VN VSP  + T +      +  D +EK+     P    V R G    +   V +
Sbjct: 172 ATKGVTVNTVSPGYIGTDMV---KAIRPDVLEKIV-ATIP----VRRLGSPDEIGSIVAW 223

Query: 242 LACRDSEFVTGHDLVVDGGF 261
           LA  +S F TG D  ++GG 
Sbjct: 224 LASEESGFSTGADFSLNGGL 243

Length = 246

>gnl|CDD|181762 PRK09291, PRK09291, short chain dehydrogenase; Provisional

 Score = 60.4 bits (147), Expect = 7e-11
 Identities = 52/184 (28%), Positives = 77/184 (41%), Gaps = 12/184 (6%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVHCDV 72
            K  +ITG  SG G   A   A  G  +I    I  ++   R  A   G+        D+
Sbjct: 2   SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLA-LRVEKLDL 60

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+        +  V      D++ +NAGI  +    V+D+       LF  NV G     
Sbjct: 61  TDAIDRAQAAEWDV------DVLLNNAGIGEAG--AVVDIPVELVRELFETNVFGPLELT 112

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +   R MV  G +G +V T+S+AG   G     Y  SKHA+  +  +   +L   GI+V 
Sbjct: 113 QGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVA 171

Query: 193 CVSP 196
            V+P
Sbjct: 172 TVNP 175

Length = 257

>gnl|CDD|187595 cd05334, DHPR_SDR_c_like, dihydropteridine reductase (DHPR), classical (c) SDRs

 Score = 59.6 bits (145), Expect = 9e-11
 Identities = 54/241 (22%), Positives = 88/241 (36%), Gaps = 30/241 (12%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
            +V ++ GG   +G    + F   G  +  I D+ +    +   SI V            
Sbjct: 1   ARVVLVYGGRGALGSAVVQAFKSRGWWVASI-DLAE--NEEADASIIVLD---SDSFTEQ 54

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             QV   V S  +  G++D +   AG  +             +D ++  N+         
Sbjct: 55  AKQV---VASVARLSGKVDALICVAGGWAGGS-AKSKSFVKNWDLMWKQNLWTSFIASHL 110

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--HGIRVN 192
           A + ++ GG+   +V T + A          Y  +K AV  L +S + +      G   N
Sbjct: 111 ATKHLLSGGL---LVLTGAKAALEPTPGMIGYGAAKAAVHQLTQSLAAENSGLPAGSTAN 167

Query: 193 CVSPHGLATPLTCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
            + P  L TP    A  MP AD     F   TPLE        +A+ +LF A   +   +
Sbjct: 168 AILPVTLDTPANRKA--MPDAD-----FSSWTPLE-------FIAELILFWASGAARPKS 213

Query: 252 G 252
           G
Sbjct: 214 G 214

Dihydropteridine reductase is an NAD-binding protein related to the SDRs. It converts dihydrobiopterin into tetrahydrobiopterin, a cofactor necessary in catecholamines synthesis. Dihydropteridine reductase has the YXXXK of these tyrosine-dependent oxidoreductases, but lacks the typical upstream Asn and Ser catalytic residues. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 221

>gnl|CDD|187612 cd05354, SDR_c7, classical (c) SDR, subgroup 7

 Score = 59.0 bits (143), Expect = 2e-10
 Identities = 49/199 (24%), Positives = 79/199 (39%), Gaps = 8/199 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           ++ K  ++TG   GIG+        HGA+  V A ++D        +    K   +  DV
Sbjct: 1   IKDKTVLVTGANRGIGKAFVESLLAHGAKK-VYAAVRDPGSAAHLVAKYGDKVVPLRLDV 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+   +KA           +D++ +NAG+L  +   + +    A  +   +NV G+    
Sbjct: 60  TDPESIKAAAAQA----KDVDVVINNAGVLKPAT-LLEEGALEALKQEMDVNVFGLLRLA 114

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  A V+   G  G+IV   SVA          Y  SK A   L +    +L   G  V 
Sbjct: 115 QAFAPVLKANG-GGAIVNLNSVASLKNFPAMGTYSASKSAAYSLTQGLRAELAAQGTLVL 173

Query: 193 CVSPHGLATPLTCHAYGMP 211
            V P  + T +     G P
Sbjct: 174 SVHPGPIDTRMA-AGAGGP 191

These proteins are members of the classical SDR family, with a canonical active site triad (and also an active site Asn) and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 235

>gnl|CDD|181334 PRK08263, PRK08263, short chain dehydrogenase; Provisional

 Score = 58.9 bits (143), Expect = 3e-10
 Identities = 53/219 (24%), Positives = 91/219 (41%), Gaps = 25/219 (11%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIA-------DIQDELGRQVATSIGVGKCHY 67
            KV  ITG + G G        + G R++  A       D+ ++ G ++           
Sbjct: 3   EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLP--------- 53

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  DVT+   V A V++ V+++G+LDI+ +NAG        + ++  S        N  G
Sbjct: 54  LALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLFG--MIEEVTESEARAQIDTNFFG 111

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                +     + E    G I+  +S+ G         YH SK A+ G+  + + ++   
Sbjct: 112 ALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEF 170

Query: 188 GIRVNCVSPHGLATPL----TCHAYGMPA-DEV-EKLFE 220
           GI+V  V P G +T         A  + A D + E+L E
Sbjct: 171 GIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE 209

Length = 275

>gnl|CDD|219957 pfam08659, KR, KR domain

 Score = 57.5 bits (140), Expect = 3e-10
 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 14/154 (9%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA------TSIGVGKCHYVHCDV 72
           ++TGG  G+G   AR  A+ GAR +V+         +         + G  +   V CDV
Sbjct: 4   LVTGGLGGLGLELARWLAERGARHLVLLSRSGAPDPEAEALLAELEARGA-EVTVVACDV 62

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++   V+AL+     +   L  +   AG+L   D  + ++    F R+ A  V G  A  
Sbjct: 63  SDRDAVRALLAEIRADGPPLRGVIHAAGVL--RDALLANMTAEDFARVLAPKVTG--AWN 118

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY 166
            H A            V  +S+AG  G   + +Y
Sbjct: 119 LHEA---TRDRPLDFFVLFSSIAGVLGSPGQANY 149

This enzymatic domain is part of bacterial polyketide synthases and catalyzes the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 181

>gnl|CDD|236308 PRK08594, PRK08594, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 58.2 bits (141), Expect = 5e-10
 Identities = 75/277 (27%), Positives = 124/277 (44%), Gaps = 52/277 (18%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQV---ATSIGVGKCHY 67
           LEGK  ++ G A+   I    AR   + GA+++      + L ++V   A ++   +   
Sbjct: 5   LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLV-FTYAGERLEKEVRELADTLEGQESLL 63

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGIL------SSSDQTVLDLDFSA 116
           + CDVT++ ++ A  ++  +  G +      I F+N   L      +S D  +L  + SA
Sbjct: 64  LPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISA 123

Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           +          + A  + A ++M EGG   SIV    +    GG+R     +  + V+G+
Sbjct: 124 YS---------LTAVAREAKKLMTEGG---SIVTLTYL----GGERV----VQNYNVMGV 163

Query: 177 VRS---ASVQ-----LGVHGIRVNCVSPHGLATPL-TCHAYGMPA-DEVEKLFEPQTPLE 226
            ++   ASV+     LG  GIRVN +S    A P+ T  A G+   + + K  E + PL 
Sbjct: 164 AKASLEASVKYLANDLGKDGIRVNAIS----AGPIRTLSAKGVGGFNSILKEIEERAPLR 219

Query: 227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
                   V D   FL    S  VTG ++ VD G+ I
Sbjct: 220 RTT-TQEEVGDTAAFLFSDLSRGVTGENIHVDSGYHI 255

Length = 257

>gnl|CDD|237099 PRK12428, PRK12428, 3-alpha-hydroxysteroid dehydrogenase; Provisional

 Score = 56.9 bits (138), Expect = 1e-09
 Identities = 63/259 (24%), Positives = 102/259 (39%), Gaps = 59/259 (22%)

Query: 31  TARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG 90
           TARL    GAR+I + D      R+   ++      ++  D+ +   + A V       G
Sbjct: 1   TARLLRFLGARVIGV-DR-----REPGMTLD----GFIQADLGDPASIDAAV---AALPG 47

Query: 91  QLDIMFSNAGILSSSD-QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIV 149
           ++D +F+ AG+  ++  + V             +N  G+    +     M  GG   +IV
Sbjct: 48  RIDALFNIAGVPGTAPVELVA-----------RVNFLGLRHLTEALLPRMAPGG---AIV 93

Query: 150 CTASVAGSCGGKRR---------------------------TDYHMSKHAVIGL-VRSAS 181
             AS+AG+   +R                            T Y +SK A+I   +R A 
Sbjct: 94  NVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALILWTMRQAQ 153

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
              G  GIRVNCV+P  + TP+      M   E   +      + G    A   A  ++F
Sbjct: 154 PWFGARGIRVNCVAPGPVFTPILGDFRSMLGQER--VDSDAKRM-GRPATADEQAAVLVF 210

Query: 242 LACRDSEFVTGHDLVVDGG 260
           L    + ++ G +L VDGG
Sbjct: 211 LCSDAARWINGVNLPVDGG 229

Length = 241

>gnl|CDD|168186 PRK05693, PRK05693, short chain dehydrogenase; Provisional

 Score = 56.7 bits (137), Expect = 2e-09
 Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 17/221 (7%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
            V +ITG +SGIG   A  F   G  +   A   +++    A          V  DV + 
Sbjct: 2   PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTA-----VQLDVNDG 56

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             +  L +     +G LD++ +NAG    +   +LD    A  R F  NV  +    +  
Sbjct: 57  AALARLAEELEAEHGGLDVLINNAGY--GAMGPLLDGGVEAMRRQFETNVFAVVGVTRAL 114

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
             ++     RG +V   SV+G         Y  SK AV  L  +  ++L   G++V  V 
Sbjct: 115 FPLLRRS--RGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQ 172

Query: 196 PHGLATPLTCHAYGMPADEVEKLFEPQTPL----EGVVLRA 232
           P  +A+    +A    + E E+L   Q+P     E +  RA
Sbjct: 173 PGAIASQFASNA----SREAEQLLAEQSPWWPLREHIQARA 209

Length = 274

>gnl|CDD|181335 PRK08264, PRK08264, short chain dehydrogenase; Validated

 Score = 55.3 bits (134), Expect = 4e-09
 Identities = 49/207 (23%), Positives = 76/207 (36%), Gaps = 15/207 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT-SIGVGKCHYVHC 70
            ++GKV ++TG   GIG          GA  +  A       R   + +    +   +  
Sbjct: 3   DIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAA------ARDPESVTDLGPRVVPLQL 56

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+   V A  ++       + I+ +NAGI  +    +L+ D  A       N  G  A
Sbjct: 57  DVTDPASVAAAAEAA----SDVTILVNNAGIFRTGS-LLLEGDEDALRAEMETNYFGPLA 111

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +  A V+   G  G+IV   SV           Y  SK A   L ++   +L   G R
Sbjct: 112 MARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTR 170

Query: 191 VNCVSPHGLATPLTCHAYG--MPADEV 215
           V  V P  + T +            +V
Sbjct: 171 VLGVHPGPIDTDMAAGLDAPKASPADV 197

Length = 238

>gnl|CDD|187670 cd09810, LPOR_like_SDR_c_like, light-dependent protochlorophyllide reductase (LPOR)-like, classical (c)-like SDRs

 Score = 55.2 bits (133), Expect = 6e-09
 Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 21/161 (13%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY--VHCDVT 73
              +ITG +SG+G   A+  A  G   +V+A        Q A  +G+ K  Y  +HCD+ 
Sbjct: 2   GTVVITGASSGLGLAAAKALARRGEWHVVMACRDFLKAEQAAQEVGMPKDSYSVLHCDLA 61

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAIN------- 124
           +   V+  VD+  +    LD +  NA +   + +      F+A  F+    +N       
Sbjct: 62  SLDSVRQFVDNFRRTGRPLDALVCNAAVYLPTAKEPR---FTADGFELTVGVNHLGHFLL 118

Query: 125 VRGMAACVKHA----ARVMVEGGVRGSIVCTASVAGSCGGK 161
              +   ++ +     R+++ G +  +     ++AG+   +
Sbjct: 119 TNLLLEDLQRSENASPRIVIVGSITHN---PNTLAGNVPPR 156

Classical SDR-like subgroup containing LPOR and related proteins. Protochlorophyllide (Pchlide) reductases act in chlorophyll biosynthesis. There are distinct enzymes that catalyze Pchlide reduction in light or dark conditions. Light-dependent reduction is via an NADP-dependent SDR, LPOR. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 311

>gnl|CDD|181260 PRK08159, PRK08159, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 54.8 bits (132), Expect = 7e-09
 Identities = 76/271 (28%), Positives = 114/271 (42%), Gaps = 32/271 (11%)

Query: 6   MCNAKNKLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQV---ATSI 60
           M  A   + GK  +I G A+   I    A+     GA  +      D L ++V   A  +
Sbjct: 1   MAQASGLMAGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAEL 59

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFS 115
           G       HCDVT+E  + A+ ++  + +G+LD     I FS+   L       +D    
Sbjct: 60  GAFVA--GHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDEL---TGRYVDTSRD 114

Query: 116 AFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH---MSKHA 172
            F     I+V    A  + A ++M +G   GSI+ T +  G+   K    Y+   ++K A
Sbjct: 115 NFTMTMDISVYSFTAVAQRAEKLMTDG---GSIL-TLTYYGA--EKVMPHYNVMGVAKAA 168

Query: 173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVL 230
           +   V+  +V LG   IRVN +S    A P+   A     D   + K  E   PL   V 
Sbjct: 169 LEASVKYLAVDLGPKNIRVNAIS----AGPIKTLAASGIGDFRYILKWNEYNAPLRRTVT 224

Query: 231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
               V D+ L+L    S  VTG    VD G+
Sbjct: 225 IE-EVGDSALYLLSDLSRGVTGEVHHVDSGY 254

Length = 272

>gnl|CDD|180766 PRK06940, PRK06940, short chain dehydrogenase; Provisional

 Score = 55.0 bits (133), Expect = 7e-09
 Identities = 70/287 (24%), Positives = 110/287 (38%), Gaps = 69/287 (24%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH---CDV 72
           +V ++ G A GIG+  AR       + +++AD  +E     A ++       V     DV
Sbjct: 3   EVVVVIG-AGGIGQAIARRVG--AGKKVLLADYNEENLEAAAKTLR-EAGFDVSTQEVDV 58

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSS--SDQTVLDLDFSAFDRLFAINVRGMAA 130
           ++   VKAL   T Q  G +  +   AG+  S  S + +L +D           + G A 
Sbjct: 59  SSRESVKALAA-TAQTLGPVTGLVHTAGVSPSQASPEAILKVD-----------LYGTAL 106

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD-------------- 165
            ++   +V+  GG   + V  AS +G                  T+              
Sbjct: 107 VLEEFGKVIAPGG---AGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIE 163

Query: 166 -----YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-ADEVEKLF 219
                Y ++K A    V + +V+ G  G R+N +SP  ++TPL       P  D    +F
Sbjct: 164 DSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMF 223

Query: 220 E------PQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
                  P TP E        +A    FL      F+TG D +VDGG
Sbjct: 224 AKSPAGRPGTPDE--------IAALAEFLMGPRGSFITGSDFLVDGG 262

Length = 275

>gnl|CDD|187614 cd05356, 17beta-HSD1_like_SDR_c, 17-beta-hydroxysteroid dehydrogenases (17beta-HSDs) types -1, -3, and -12, -like, classical (c) SDRs

 Score = 54.1 bits (131), Expect = 9e-09
 Identities = 46/196 (23%), Positives = 78/196 (39%), Gaps = 12/196 (6%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCD 71
           G  A++TG   GIG+  A   A  G  +I+I+  Q++L   VA  I      +   +  D
Sbjct: 1   GTWAVVTGATDGIGKAYAEELAKRGFNVILISRTQEKL-DAVAKEIEEKYGVETKTIAAD 59

Query: 72  VTNECQV-KALVDSTVQNYGQLDIMF--SNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            +    + + +          LDI    +N GI  S  +  L+        +  +NV   
Sbjct: 60  FSAGDDIYERIEKELE----GLDIGILVNNVGISHSIPEYFLETPEDELQDIINVNVMAT 115

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               +     MV+   +G+IV  +S AG         Y  SK  +    R+   +    G
Sbjct: 116 LKMTRLILPGMVKRK-KGAIVNISSFAGLIPTPLLATYSASKAFLDFFSRALYEEYKSQG 174

Query: 189 IRVNCVSPHGLATPLT 204
           I V  + P+ +AT ++
Sbjct: 175 IDVQSLLPYLVATKMS 190

This subgroup includes various 17-beta-hydroxysteroid dehydrogenases and 3-ketoacyl-CoA reductase, these are members of the SDR family, and contain the canonical active site tetrad and glycine-rich NAD-binding motif of the classical SDRs. 3-ketoacyl-CoA reductase (KAR, aka 17beta-HSD type 12, encoded by HSD17B12) acts in fatty acid elongation; 17beta- hydroxysteroid dehydrogenases are isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. 17beta-estradiol dehydrogenase (aka 17beta-HSD type 1, encoded by HSD17B1) converts estrone to estradiol. Estradiol is the predominant female sex hormone. 17beta-HSD type 3 (aka testosterone 17-beta-dehydrogenase 3, encoded by HSD17B3) catalyses the reduction of androstenedione to testosterone, it also accepts estrogens as substrates. This subgroup also contains a putative steroid dehydrogenase let-767 from Caenorhabditis elegans, mutation in which results in hypersensitivity to cholesterol limitation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 239

>gnl|CDD|236389 PRK09134, PRK09134, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 62/259 (23%), Positives = 99/259 (38%), Gaps = 39/259 (15%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           + A++TG A  IG   A   A HG  + V  +   +    +A  I     +   +  D+ 
Sbjct: 10  RAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLA 69

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +E +V+ALV       G + ++ +NA +      +      +++DR  A N+R      +
Sbjct: 70  DEAEVRALVARASAALGPITLLVNNASLF--EYDSAASFTRASWDRHMATNLRAPFVLAQ 127

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTD--------YHMSKHAVIGLVRSASVQLG 185
             AR +     RG +V            +R          Y +SK A+    R+ +  L 
Sbjct: 128 AFARALPA-DARGLVVNMID--------QRVWNLNPDFLSYTLSKAALWTATRTLAQALA 178

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG----HVADAVLF 241
              IRVN + P G   P           +  + F  Q       L  G     +A AV +
Sbjct: 179 PR-IRVNAIGP-GPTLP--------SGRQSPEDFARQH--AATPLGRGSTPEEIAAAVRY 226

Query: 242 LACRDSEFVTGHDLVVDGG 260
           L    S  VTG  + VDGG
Sbjct: 227 LLDAPS--VTGQMIAVDGG 243

Length = 258

>gnl|CDD|236372 PRK09072, PRK09072, short chain dehydrogenase; Provisional

 Score = 53.8 bits (130), Expect = 1e-08
 Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 4/192 (2%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L+ K  ++TG + GIG+  A   A  GAR++++    ++L    A     G+  +V  D
Sbjct: 2   DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVAD 61

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +T+E   +A++    +  G ++++ +NAG+  +    + D D  A +RL A+N+      
Sbjct: 62  LTSEAGREAVLAR-AREMGGINVLINNAGV--NHFALLEDQDPEAIERLLALNLTAPMQL 118

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +    ++        +V   S  GS G      Y  SK A+ G   +   +L   G+RV
Sbjct: 119 TRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRV 177

Query: 192 NCVSPHGLATPL 203
             ++P    T +
Sbjct: 178 LYLAPRATRTAM 189

Length = 263

>gnl|CDD|181113 PRK07775, PRK07775, short chain dehydrogenase; Provisional

 Score = 53.6 bits (129), Expect = 2e-08
 Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 21/236 (8%)

Query: 18  AIITGGASGIGETTARLFADHG------ARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           A++ G +SGIG  TA   A  G      AR +   +  +EL  ++  + G G+      D
Sbjct: 13  ALVAGASSGIGAATAIELAAAGFPVALGARRV---EKCEELVDKI-RADG-GEAVAFPLD 67

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   VK+ V    +  G+++++ S AG        + ++    F+    I++ G    
Sbjct: 68  VTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYFG--KLHEISTEQFESQVQIHLVGANRL 125

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
                  M+E   RG ++   S            Y  +K  +  +V +  ++L   G+R 
Sbjct: 126 ATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRA 184

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL----EGVVLRAGHVADAVLFLA 243
           + V P      LT   + +PA+ +  + E             LRA  +A A+ F+A
Sbjct: 185 SIVHP---GPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASDLARAITFVA 237

Length = 274

>gnl|CDD|180343 PRK05993, PRK05993, short chain dehydrogenase; Provisional

 Score = 53.1 bits (128), Expect = 2e-08
 Identities = 51/198 (25%), Positives = 84/198 (42%), Gaps = 19/198 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           +  +ITG +SGIG   AR     G R+      ++++    A  +   +   +  D    
Sbjct: 5   RSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGL---EAFQL--DYAEP 59

Query: 76  CQVKALVDSTVQ-NYGQLDIMFSN-----AGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
             + ALV   ++ + G+LD +F+N      G +        DL   A    F  N  G  
Sbjct: 60  ESIAALVAQVLELSGGRLDALFNNGAYGQPGAVE-------DLPTEALRAQFEANFFGWH 112

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +    VM + G +G IV  +S+ G    K R  Y+ SK A+ GL  +  ++L   GI
Sbjct: 113 DLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGI 171

Query: 190 RVNCVSPHGLATPLTCHA 207
            V+ + P  + T    +A
Sbjct: 172 HVSLIEPGPIETRFRANA 189

Length = 277

>gnl|CDD|214833 smart00822, PKS_KR, This enzymatic domain is part of bacterial polyketide synthases

 Score = 52.1 bits (126), Expect = 3e-08
 Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 19/123 (15%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVI-----------ADIQDELGRQVATSIGVGK 64
              +ITGG  G+G   AR  A+ GAR +V+           A +  EL    A       
Sbjct: 1   GTYLITGGLGGLGRALARWLAERGARRLVLLSRSGPDAPGAAALLAELEAAGAR------ 54

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
              V CDV +   + A++ +     G L  +   AG+L   D  +  L    F  + A  
Sbjct: 55  VTVVACDVADRDALAAVLAAIPAVEGPLTGVIHAAGVL--DDGVLASLTPERFAAVLAPK 112

Query: 125 VRG 127
             G
Sbjct: 113 AAG 115

It catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. Length = 180

>gnl|CDD|235737 PRK06197, PRK06197, short chain dehydrogenase; Provisional

 Score = 52.3 bits (126), Expect = 5e-08
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 9/114 (7%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH----YVHC 70
           G+VA++TG  +G+G  TA   A  GA  +V+A    + G+  A  I              
Sbjct: 16  GRVAVVTGANTGLGYETAAALAAKGAH-VVLAVRNLDKGKAAAARITAATPGADVTLQEL 74

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
           D+T+   V+A  D+    Y ++D++ +NAG++ +  QT  D     F+  F  N
Sbjct: 75  DLTSLASVRAAADALRAAYPRIDLLINNAGVMYTPKQTTAD----GFELQFGTN 124

Length = 306

>gnl|CDD|226476 COG3967, DltE, Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

 Score = 52.0 bits (125), Expect = 6e-08
 Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           K  G   +ITGGASGIG   A+ F + G  +I+    ++ L    A +  +   H   CD
Sbjct: 2   KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEI---HTEVCD 58

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN----VRG 127
           V +    + LV+   + Y  L+++ +NAGI  + D T  +      ++  A N    +R 
Sbjct: 59  VADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRL 118

Query: 128 MAACVKH 134
            A  + H
Sbjct: 119 TALLLPH 125

Length = 245

>gnl|CDD|187582 cd05274, KR_FAS_SDR_x, ketoreductase (KR) and fatty acid synthase (FAS), complex (x) SDRs

 Score = 52.0 bits (125), Expect = 9e-08
 Identities = 35/118 (29%), Positives = 51/118 (43%), Gaps = 17/118 (14%)

Query: 19  IITGGASGIGETTARLFADHGARMIVI---------ADIQDELGRQVATSIGVGKCHYVH 69
           +ITGG  G+G   AR  A  GAR +V+         A  +  L R     +       V 
Sbjct: 154 LITGGLGGLGLLVARWLAARGARHLVLLSRRGPAPRAAARAALLRAGGARV-----SVVR 208

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           CDVT+   + AL+   +   G L  +   AG+L   D  + +L  +AF  + A  V G
Sbjct: 209 CDVTDPAALAALLAE-LAAGGPLAGVIHAAGVL--RDALLAELTPAAFAAVLAAKVAG 263

Ketoreductase, a module of the multidomain polyketide synthase (PKS), has 2 subdomains, each corresponding to a SDR family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerize but is composed of 2 subdomains, each resembling an SDR monomer. The active site resembles that of typical SDRs, except that the usual positions of the catalytic Asn and Tyr are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular PKSs are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) FAS. In some instances, such as porcine FAS, an enoyl reductase (ER) module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consist of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthase uses a dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-KR, forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-ER. Polyketide synthesis also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP-binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 375

>gnl|CDD|181126 PRK07806, PRK07806, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 1e-07
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHC 70
          L GK A++TG + GIG  TA++ A  GA ++V    +     +V   I    G+   V  
Sbjct: 4  LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGA 63

Query: 71 DVTNECQVKALVDSTVQNYGQLDIMFSNA 99
          D+T+E  V AL+D+  + +G LD +  NA
Sbjct: 64 DLTDEESVAALMDTAREEFGGLDALVLNA 92

Length = 248

>gnl|CDD|169389 PRK08339, PRK08339, short chain dehydrogenase; Provisional

 Score = 50.6 bits (121), Expect = 2e-07
 Identities = 63/269 (23%), Positives = 109/269 (40%), Gaps = 34/269 (12%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIGVGKCHYVHC 70
           L GK+A  T  + GIG   AR+ A  GA +I+++  ++ L   R+   S       Y+  
Sbjct: 6   LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVA 65

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+T    ++  V   ++N G+ DI F + G         +++    ++    + +     
Sbjct: 66  DLTKREDLERTVKE-LKNIGEPDIFFFSTG--GPKPGYFMEMSMEDWEGAVKLLLYPAVY 122

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +     M   G  G I+ + SVA           ++ + ++ GLVR+ + +LG  GI 
Sbjct: 123 LTRALVPAMERKGF-GRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGIT 181

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL--------------RAGH-- 234
           VN + P  + T           D V +L + +   EG  +              R G   
Sbjct: 182 VNGIMPGIIRT-----------DRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLGEPE 230

Query: 235 -VADAVLFLACRDSEFVTGHDLVVDGGFL 262
            +   V FLA     ++ G  + VDGG L
Sbjct: 231 EIGYLVAFLASDLGSYINGAMIPVDGGRL 259

Length = 263

>gnl|CDD|181416 PRK08415, PRK08415, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 49.7 bits (119), Expect = 4e-07
 Identities = 68/266 (25%), Positives = 112/266 (42%), Gaps = 32/266 (12%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQV---ATSIGVGKCHY 67
           ++GK  +I G A+   I    A+   + GA +     + + L ++V   A  +G    + 
Sbjct: 3   MKGKKGLIVGVANNKSIAYGIAKACFEQGAELA-FTYLNEALKKRVEPIAQELGSDYVY- 60

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
              DV+     K+L +S  ++ G++D     + F+    L  S    L+    AF+    
Sbjct: 61  -ELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGS---FLETSKEAFNIAME 116

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM---SKHAVIGLVRS 179
           I+V  +    +    ++ +G      V T S  G  G K    Y++   +K A+   VR 
Sbjct: 117 ISVYSLIELTRALLPLLNDGAS----VLTLSYLG--GVKYVPHYNVMGVAKAALESSVRY 170

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVAD 237
            +V LG  GIRVN +S    A P+   A     D   + K  E   PL+  V     V +
Sbjct: 171 LAVDLGKKGIRVNAIS----AGPIKTLAASGIGDFRMILKWNEINAPLKKNV-SIEEVGN 225

Query: 238 AVLFLACRDSEFVTGHDLVVDGGFLI 263
           + ++L    S  VTG    VD G+ I
Sbjct: 226 SGMYLLSDLSSGVTGEIHYVDAGYNI 251

Length = 274

>gnl|CDD|187619 cd05361, haloalcohol_DH_SDR_c-like, haloalcohol dehalogenase, classical (c) SDRs

 Score = 49.1 bits (117), Expect = 5e-07
 Identities = 47/193 (24%), Positives = 78/193 (40%), Gaps = 24/193 (12%)

Query: 81  LVDSTVQNYGQLDIMFSN---AGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
           LVD+ +Q  G +D++ SN      ++  D T       AF+   A+++   A      A+
Sbjct: 62  LVDAVLQAGGAIDVLVSNDYIPRPMNPIDGTSEADIRQAFE---ALSIFPFALLQAAIAQ 118

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH 197
           +   GG  GSI+   S          + Y  ++ A + L  S + +L    I V  + P+
Sbjct: 119 MKKAGG--GSIIFITSAVPKKPLAYNSLYGPARAAAVALAESLAKELSRDNILVYAIGPN 176

Query: 198 GLATPLTCHAYGMPADEVEKLFEPQ--------TPLEGVVLRAGHVADAVLFLACRDSEF 249
              +P        P  + E    P+         PL G + R   +   V FLA R ++ 
Sbjct: 177 FFNSP-----TYFPTSDWEN--NPELRERVKRDVPL-GRLGRPDEMGALVAFLASRRADP 228

Query: 250 VTGHDLVVDGGFL 262
           +TG      GG+L
Sbjct: 229 ITGQFFAFAGGYL 241

Dehalogenases cleave carbon-halogen bonds. Haloalcohol dehalogenase show low sequence similarity to short-chain dehydrogenases/reductases (SDRs). Like the SDRs, haloalcohol dehalogenases have a conserved catalytic triad (Ser-Tyr-Lys/Arg), and form a Rossmann fold. However, the normal classical SDR NAD(P)-binding motif (TGXXGXG) and NAD-binding function is replaced with a halide binding site, allowing the enzyme to catalyze a dehalogenation reaction. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 242

>gnl|CDD|212495 cd09807, retinol-DH_like_SDR_c, retinol dehydrogenases (retinol-DHs), classical (c) SDRs

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYV---HC 70
           GK  IITG  +GIG+ TAR  A  GAR +++A        + A  I      H V   H 
Sbjct: 1   GKTVIITGANTGIGKETARELARRGAR-VIMACRDMAKCEEAAAEIRRDTLNHEVIVRHL 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGIL 102
           D+ +   ++A     +    +LD++ +NAG++
Sbjct: 60  DLASLKSIRAFAAEFLAEEDRLDVLINNAGVM 91

Classical SDR-like subgroup containing retinol-DHs and related proteins. Retinol is processed by a medium chain alcohol dehydrogenase followed by retinol-DHs. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. This subgroup includes the human proteins: retinol dehydrogenase -12, -13 ,and -14. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 274

>gnl|CDD|187666 cd09806, type1_17beta-HSD-like_SDR_c, human estrogenic 17beta-hydroxysteroid dehydrogenase type 1 (type 1 17beta-HSD)-like, classical (c) SDRs

 Score = 48.6 bits (116), Expect = 9e-07
 Identities = 57/213 (26%), Positives = 91/213 (42%), Gaps = 10/213 (4%)

Query: 16  KVAIITGGASGIG-ETTARLFADHGARMIVIADIQD--ELGRQVATSIGV--GKCHYVHC 70
            V +ITG +SGIG     RL +D   R  V A ++D  + GR    +  +  G    +  
Sbjct: 1   TVVLITGCSSGIGLHLAVRLASDPSKRFKVYATMRDLKKKGRLWEAAGALAGGTLETLQL 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +   V A V+   +    +D++  NAG+        L  D  A   +F +NV G   
Sbjct: 61  DVCDSKSVAAAVERVTE--RHVDVLVCNAGVGLLGPLEALSED--AMASVFDVNVFGTVR 116

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++     M   G  G I+ T+SV G  G      Y  SK A+ GL  S +VQL    + 
Sbjct: 117 MLQAFLPDMKRRG-SGRILVTSSVGGLQGLPFNDVYCASKFALEGLCESLAVQLLPFNVH 175

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           ++ +    + T       G P + +++  +  T
Sbjct: 176 LSLIECGPVHTAFMEKVLGSPEEVLDRTADDIT 208

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical SDR subgroup includes human type 1 17beta-HSD, human retinol dehydrogenase 8, zebrafish photoreceptor associated retinol dehydrogenase type 2, and a chicken ovary-specific 17beta-hydroxysteroid dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 258

>gnl|CDD|182531 PRK10538, PRK10538, malonic semialdehyde reductase; Provisional

 Score = 47.1 bits (112), Expect = 3e-06
 Identities = 56/246 (22%), Positives = 103/246 (41%), Gaps = 46/246 (18%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKCHYVH 69
           + ++TG  +G GE   R F   G ++I        + +++DELG  +         +   
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNL---------YIAQ 52

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGI---LSSSDQTVLDLDFSAFDRLFAINVR 126
            DV N   ++ ++ S    +  +D++ +NAG+   L  + +  ++     ++ +   N +
Sbjct: 53  LDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVE----DWETMIDTNNK 108

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGS---CGGKRRTDYHMSKHAVIGLVRSASVQ 183
           G+    +     MVE    G I+   S AGS    GG     Y  +K      VR  S+ 
Sbjct: 109 GLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNV---YGATK----AFVRQFSLN 160

Query: 184 L--GVHG--IRVNCVSPHGL--ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
           L   +HG  +RV  + P GL   T  +   +     + EK ++    L         V++
Sbjct: 161 LRTDLHGTAVRVTDIEP-GLVGGTEFSNVRFKGDDGKAEKTYQNTVALT-----PEDVSE 214

Query: 238 AVLFLA 243
           AV ++A
Sbjct: 215 AVWWVA 220

Length = 248

>gnl|CDD|187669 cd09809, human_WWOX_like_SDR_c-like, human WWOX (WW domain-containing oxidoreductase)-like, classical (c)-like SDRs

 Score = 46.8 bits (111), Expect = 4e-06
 Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 3/94 (3%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQ---DELGRQVATSIGVGKCHYVHCD 71
           GKV IITG  SGIG  TAR FA HGA +I+             ++       +   +  D
Sbjct: 1   GKVIIITGANSGIGFETARSFALHGAHVILACRNMSRASAAVSRILEEWHKARVEAMTLD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS 105
           + +   V+   ++       L ++  NA + +  
Sbjct: 61  LASLRSVQRFAEAFKAKNSPLHVLVCNAAVFALP 94

Classical-like SDR domain of human WWOX and related proteins. Proteins in this subfamily share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 284

>gnl|CDD|181020 PRK07533, PRK07533, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 45.3 bits (108), Expect = 9e-06
 Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 48/274 (17%)

Query: 13  LEGKVAIITGGASG--IGETTARLFADHGARMIVIADIQDE-------LGRQVATSIGVG 63
           L GK  ++ G A+   I    AR F   GA  + +  + D+       L  ++   I   
Sbjct: 8   LAGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPI--- 63

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAFD 118
              ++  DV    Q++A+     + +G+LD     I F+    L      V+D     F 
Sbjct: 64  ---FLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGR---VVDCSREGFA 117

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM---SKHAVIG 175
               ++        + A  +M  GG   S++ T S  G+   K   +Y++    K A+  
Sbjct: 118 LAMDVSCHSFIRMARLAEPLMTNGG---SLL-TMSYYGA--EKVVENYNLMGPVKAALES 171

Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP------ADEVEKLFEPQTPLEGVV 229
            VR  + +LG  GIRV+ +SP  L T     A G+        D  E+      PL  +V
Sbjct: 172 SVRYLAAELGPKGIRVHAISPGPLKTRA---ASGIDDFDALLEDAAER-----APLRRLV 223

Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
                V     FLA   +  +TG+ L +DGG+ I
Sbjct: 224 -DIDDVGAVAAFLASDAARRLTGNTLYIDGGYHI 256

Length = 258

>gnl|CDD|180838 PRK07102, PRK07102, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 1e-05
 Identities = 51/188 (27%), Positives = 74/188 (39%), Gaps = 10/188 (5%)

Query: 20  ITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNEC 76
           I G  S I    AR +A  GAR+ + A   + L  ++A  +   G         D+ +  
Sbjct: 6   IIGATSDIARACARRYAAAGARLYLAARDVERL-ERLADDLRARGAVAVSTHELDILDTA 64

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
              A +DS        DI+    G L   DQ   + D +   R F  N  G  A +   A
Sbjct: 65  SHAAFLDSLP---ALPDIVLIAVGTL--GDQAACEADPALALREFRTNFEGPIALLTLLA 119

Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
                 G  G+IV  +SVAG  G      Y  +K A+   +     +L   G+ V  V P
Sbjct: 120 NRFEARG-SGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKP 178

Query: 197 HGLATPLT 204
             + TP+T
Sbjct: 179 GFVRTPMT 186

Length = 243

>gnl|CDD|180774 PRK06953, PRK06953, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 2e-05
 Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 14/172 (8%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           K  +I G + GIG    R +   G R  VIA  +D        ++G  +   +  DV + 
Sbjct: 2   KTVLIVGASRGIGREFVRQYRADGWR--VIATARDAAALAALQALG-AEALAL--DVADP 56

Query: 76  CQVKAL---VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG-MAAC 131
             V  L   +D        LD     AG+     + V  +    FD +   NV G M   
Sbjct: 57  ASVAGLAWKLDGE-----ALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLL 111

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
                 V   GGV   +       G   G     Y  SK A+   +R+AS+Q
Sbjct: 112 PILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQ 163

Length = 222

>gnl|CDD|187654 cd08951, DR_C-13_KR_SDR_c_like, daunorubicin C-13 ketoreductase (KR), classical (c)-like SDRs

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 28/113 (24%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 20  ITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKCHYVHCDV 72
           ITG + G+G   AR     G  +++        AD +          IG         D+
Sbjct: 12  ITGSSDGLGLAAARTLLHQGHEVVLHARSQKRAADAKAACPGAAGVLIG---------DL 62

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
           ++  + + L D  V   G+ D +  NAGILS  ++   D        + A+NV
Sbjct: 63  SSLAETRKLADQ-VNAIGRFDAVIHNAGILSGPNRKTPDTGIP---AMVAVNV 111

Daunorubicin is a clinically important therapeutic compound used in some cancer treatments. Daunorubicin C-13 ketoreductase is member of the classical SDR family with a canonical glycine-rich NAD(P)-binding motif, but lacking a complete match to the active site tetrad characteristic of this group. The critical Tyr, plus the Lys and upstream Asn are present, but the catalytic Ser is replaced, generally by Gln. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 260

>gnl|CDD|235813 PRK06482, PRK06482, short chain dehydrogenase; Provisional

 Score = 43.2 bits (102), Expect = 6e-05
 Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 24/219 (10%)

Query: 15  GKVAIITGGASGIG-ETTARLFA--DHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            K   ITG +SG G   T RL A  D  A  +   D  D+L  +    + V +      D
Sbjct: 2   SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQL-----D 56

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGI-LSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           VT+   V+A+VD      G++D++ SNAG  L  + + + D   +   R    N+ G   
Sbjct: 57  VTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSD---AQIRRQIDTNLIGSIQ 113

Query: 131 CVKHA-ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            ++ A   +  +GG  G IV  +S  G       + YH +K  + G V + + ++   GI
Sbjct: 114 VIRAALPHLRRQGG--GRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGI 171

Query: 190 RVNCVSP--------HGLATPLTCHAY-GMPADEVEKLF 219
               V P         GL       AY   P  ++ +  
Sbjct: 172 EFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRAL 210

Length = 276

>gnl|CDD|187665 cd09805, type2_17beta_HSD-like_SDR_c, human 17beta-hydroxysteroid dehydrogenase type 2 (type 2 17beta-HSD)-like, classical (c) SDRs

 Score = 43.0 bits (102), Expect = 6e-05
 Identities = 48/204 (23%), Positives = 74/204 (36%), Gaps = 31/204 (15%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR-----QVATSIGVGKCHYVHC 70
           K  +ITG  SG G   A+     G    V+A    + G      +   S    +   +  
Sbjct: 1   KAVLITGCDSGFGNLLAKKLDSLG--FTVLAGCLTKNGPGAKELRRVCS---DRLRTLQL 55

Query: 71  DVTNECQVKAL---VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           DVT   Q+K     V   V   G L  + +NAGIL       L L    + +   +N+ G
Sbjct: 56  DVTKPEQIKRAAQWVKEHVGEKG-LWGLVNNAGILGFGGDEEL-LPMDDYRKCMEVNLFG 113

Query: 128 -------MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
                      ++ A         +G +V  +S+ G         Y  SK AV     S 
Sbjct: 114 TVEVTKAFLPLLRRA---------KGRVVNVSSMGGRVPFPAGGAYCASKAAVEAFSDSL 164

Query: 181 SVQLGVHGIRVNCVSPHGLATPLT 204
             +L   G++V+ + P    T +T
Sbjct: 165 RRELQPWGVKVSIIEPGNFKTGIT 188

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. This classical-SDR subgroup includes the human proteins: type 2 17beta-HSD, type 6 17beta-HSD, type 2 11beta-HSD, dehydrogenase/reductase SDR family member 9, short-chain dehydrogenase/reductase family 9C member 7, 3-hydroxybutyrate dehydrogenase type 1, and retinol dehydrogenase 5. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 281

>gnl|CDD|180586 PRK06483, PRK06483, dihydromonapterin reductase; Provisional

 Score = 42.6 bits (101), Expect = 7e-05
 Identities = 58/255 (22%), Positives = 85/255 (33%), Gaps = 41/255 (16%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQ----DELGRQVATSIGVGKCHYVHCDVTN 74
           +ITG    IG   A      G  +IV         D L +  A  I          D + 
Sbjct: 6   LITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCI--------QADFST 57

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
              + A +D   Q+   L  +  NA    +        D     R+  I+V         
Sbjct: 58  NAGIMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLAD--VLARMMQIHVNAPYLLNLA 115

Query: 135 AARVMVEGGVRGS--IVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
              ++   G   S  I  T  V    G  +   Y  SK A+  +  S + +L    ++VN
Sbjct: 116 LEDLLRGHGHAASDIIHITDYVV-EKGSDKHIAYAASKAALDNMTLSFAAKLAPE-VKVN 173

Query: 193 CVSP-------HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            ++P          A      AY   A  + K      P E  ++      D V +L   
Sbjct: 174 SIAPALILFNEGDDA------AYRQKA--LAKSLLKIEPGEEEII------DLVDYLL-- 217

Query: 246 DSEFVTGHDLVVDGG 260
            S +VTG  L VDGG
Sbjct: 218 TSCYVTGRSLPVDGG 232

Length = 236

>gnl|CDD|169390 PRK08340, PRK08340, glucose-1-dehydrogenase; Provisional

 Score = 42.9 bits (101), Expect = 7e-05
 Identities = 50/249 (20%), Positives = 103/249 (41%), Gaps = 9/249 (3%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           ++T  + GIG   AR     GAR+++ +  ++ L + +      G+ + V  D++++  +
Sbjct: 4   LVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDL 63

Query: 79  KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV 138
           K LV    +  G +D +  NAG +      + +  +S +     +++           + 
Sbjct: 64  KNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQA 123

Query: 139 MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG 198
            +E  ++G +V  +SV+            +++  ++ L +  S   G  GIR   V    
Sbjct: 124 WLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGS 183

Query: 199 LATP-------LTCHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
             TP             G+  +E  E+    +TPL     R   +   + FL   ++E++
Sbjct: 184 FDTPGARENLARIAEERGVSFEETWEREVLERTPL-KRTGRWEELGSLIAFLLSENAEYM 242

Query: 251 TGHDLVVDG 259
            G  +V DG
Sbjct: 243 LGSTIVFDG 251

Length = 259

>gnl|CDD|212496 cd11730, Tthb094_like_SDR_c, Tthb094 and related proteins, classical (c) SDRs

 Score = 42.1 bits (99), Expect = 9e-05
 Identities = 50/202 (24%), Positives = 76/202 (37%), Gaps = 27/202 (13%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIA-DIQD--ELGRQVATSIGVGKCHYVHCDVTN 74
           A+I G   GIG   AR  A  G R+++   D      L  +V              DV  
Sbjct: 1   ALILGATGGIGRALARALAGRGWRLLLSGRDAGALAGLAAEVGALA-------RPADVAA 53

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
           E +V AL     Q  G LD++   AG +      +     +A+ R+   N+ G A  +KH
Sbjct: 54  ELEVWAL----AQELGPLDLLVYAAGAILGK--PLARTKPAAWRRILDANLTGAALVLKH 107

Query: 135 AARVMVEGG---VRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           A  ++  G      G+      + G         Y  +K A+   V  A  +  V G+R+
Sbjct: 108 ALALLAAGARLVFLGAYPELVMLPGLSA------YAAAKAALEAYVEVARKE--VRGLRL 159

Query: 192 NCVSPHGLATPLTCHAYGMPAD 213
             V P  + T L      +P  
Sbjct: 160 TLVRPPAVDTGLWAPPGRLPKG 181

Tthb094 from Thermus Thermophilus is a classical SDR which binds NADP. Members of this subgroup contain the YXXXK active site characteristic of SDRs. Also, an upstream Asn residue of the canonical catalytic tetrad is partially conserved in this subgroup of proteins of undetermined function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 206

>gnl|CDD|180596 PRK06505, PRK06505, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 40/270 (14%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQV---ATSIGVGKCHY 67
           ++GK  +I G A+   I    A+  A  GA +       + LG++V   A S+G     +
Sbjct: 5   MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQ-GEALGKRVKPLAESLG---SDF 60

Query: 68  V-HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-----DLDFSAFDRLF 121
           V  CDV +   V A+ ++  + +G+LD +    G    SD+  L     D     F R  
Sbjct: 61  VLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGF---SDKNELKGRYADTTRENFSRTM 117

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT--DYH---MSKHAVIGL 176
            I+        K AA++M +GG        + +  + GG  R   +Y+   ++K A+   
Sbjct: 118 VISCFSFTEIAKRAAKLMPDGG--------SMLTLTYGGSTRVMPNYNVMGVAKAALEAS 169

Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ---TPLEGVVLRAG 233
           VR  +   G  GIRVN +S    A P+   A G    +   +F  Q   +PL   V    
Sbjct: 170 VRYLAADYGPQGIRVNAIS----AGPVRTLA-GAGIGDARAIFSYQQRNSPLRRTV-TID 223

Query: 234 HVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
            V  + L+L    S  VTG    VD G+ I
Sbjct: 224 EVGGSALYLLSDLSSGVTGEIHFVDSGYNI 253

Length = 271

>gnl|CDD|180753 PRK06924, PRK06924, short chain dehydrogenase; Provisional

 Score = 42.0 bits (99), Expect = 1e-04
 Identities = 19/91 (20%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           +  IITG + G+GE  A    + G  +I I+  +++   ++A         +   D+ + 
Sbjct: 2   RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLA-EQYNSNLTFHSLDLQDV 60

Query: 76  CQVKAL---VDSTVQNYGQLDIMF-SNAGIL 102
            +++     + S++Q      I   +NAG++
Sbjct: 61  HELETNFNEILSSIQEDNVSSIHLINNAGMV 91

Length = 251

>gnl|CDD|168626 PRK06603, PRK06603, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 41.1 bits (96), Expect = 2e-04
 Identities = 69/266 (25%), Positives = 116/266 (43%), Gaps = 32/266 (12%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVI--ADIQDELGRQVATSIGVGKCHYV 68
           L+GK  +ITG A+   I    A+L   HGA +     +++ ++  + +A  IG   C++V
Sbjct: 6   LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIG---CNFV 62

Query: 69  -HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-----DLDFSAFDRLFA 122
              DVTN   +  L D   + +G  D +      ++ +D+  L     D     F     
Sbjct: 63  SELDVTNPKSISNLFDDIKEKWGSFDFLLHG---MAFADKNELKGRYVDTSLENFHNSLH 119

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM---SKHAVIGLVRS 179
           I+   +    + A  +M +GG   SIV T +  G+   K   +Y++   +K A+   V+ 
Sbjct: 120 ISCYSLLELSRSAEALMHDGG---SIV-TLTYYGA--EKVIPNYNVMGVAKAALEASVKY 173

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVAD 237
            +  +G + IRVN +S    A P+   A     D   + K      PL+    +   V  
Sbjct: 174 LANDMGENNIRVNAIS----AGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQE-DVGG 228

Query: 238 AVLFLACRDSEFVTGHDLVVDGGFLI 263
           A ++L    S+ VTG    VD G+ I
Sbjct: 229 AAVYLFSELSKGVTGEIHYVDCGYNI 254

Length = 260

>gnl|CDD|177654 PLN00015, PLN00015, protochlorophyllide reductase

 Score = 41.2 bits (97), Expect = 3e-04
 Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV--HCDVTNEC 76
           IITG +SG+G  TA+  A+ G   +V+A        + A S G+ K  Y   H D+ +  
Sbjct: 1   IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLD 60

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGI 101
            V+  VD+  ++   LD++  NA +
Sbjct: 61  SVRQFVDNFRRSGRPLDVLVCNAAV 85

Length = 308

>gnl|CDD|187535 cd02266, SDR, Short-chain dehydrogenases/reductases (SDR)

 Score = 39.8 bits (93), Expect = 4e-04
 Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 3/121 (2%)

Query: 92  LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCT 151
            D++  NA I    D  ++DL  S  +R    NV G    ++ A  +M      G  +  
Sbjct: 32  RDVVVHNAAI--LDDGRLIDLTGSRIERAIRANVVGTRRLLEAARELMKAKR-LGRFILI 88

Query: 152 ASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP 211
           +SVAG  G      Y  SK A+ GL +  + +   +G+    V+    A          P
Sbjct: 89  SSVAGLFGAPGLGGYAASKAALDGLAQQWASEGWGNGLPATAVACGTWAGSGMAKGPVAP 148

Query: 212 A 212
            
Sbjct: 149 E 149

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase (KR) domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 186

>gnl|CDD|181324 PRK08251, PRK08251, short chain dehydrogenase; Provisional

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 51/209 (24%), Positives = 78/209 (37%), Gaps = 25/209 (11%)

Query: 16  KVAIITGGASGIGETTARLFADHGA-------RMIVIADIQDEL-----GRQVATSIGVG 63
           +  +ITG +SG+G   AR FA  G        R   + +++ EL     G +VA +    
Sbjct: 3   QKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVA---- 58

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
                  DV +  QV  +        G LD +  NAGI       +    F A       
Sbjct: 59  -----ALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGI--GKGARLGTGKFWANKATAET 111

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASV 182
           N     A  + A  +  E G  G +V  +SV+   G    +  Y  SK  V  L      
Sbjct: 112 NFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRA 170

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMP 211
           +L    I+V+ + P  + + +   A   P
Sbjct: 171 ELAKTPIKVSTIEPGYIRSEMNAKAKSTP 199

Length = 248

>gnl|CDD|187645 cd08941, 3KS_SDR_c, 3-keto steroid reductase, classical (c) SDRs

 Score = 38.9 bits (91), Expect = 0.002
 Identities = 32/154 (20%), Positives = 53/154 (34%), Gaps = 23/154 (14%)

Query: 16  KVAIITGGASGIGETTA-RLFA--DHGARMIVI----------ADIQDELGRQVATSIGV 62
           KV ++TG  SG+G     RL A  D    + +I          A  +  L       +  
Sbjct: 2   KVVLVTGANSGLGLAICERLLAEDDENPELTLILACRNLQRAEAACRALLASHPDARVVF 61

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAF-DRLF 121
               YV  D++N   V A      + Y +LD ++ NAGI+ +     +        + LF
Sbjct: 62  D---YVLVDLSNMVSVFAAAKELKKRYPRLDYLYLNAGIMPNPGIDWIGAIKEVLTNPLF 118

Query: 122 AINVRGMAACVKHAARVMVEGGVR----GSIVCT 151
           A+         +    +           G +  T
Sbjct: 119 AVTNPTYKI--QAEGLLSQGDKATEDGLGEVFQT 150

3-keto steroid reductase (in concert with other enzymes) catalyzes NADP-dependent sterol C-4 demethylation, as part of steroid biosynthesis. 3-keto reductase is a classical SDR, with a well conserved canonical active site tetrad and fairly well conserved characteristic NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 290

>gnl|CDD|187668 cd09808, DHRS-12_like_SDR_c-like, human dehydrogenase/reductase SDR family member (DHRS)-12/FLJ13639-like, classical (c)-like SDRs

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 9/124 (7%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQD---ELGRQVATSIGVGKCHYVH-C 70
           G+  +ITG  SGIG+  A   A  G  + ++   Q    E  +++ T  G     ++H  
Sbjct: 1   GRSFLITGANSGIGKAAALAIAKRGGTVHMVCRNQTRAEEARKEIETESGNQNI-FLHIV 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+++  QV   V+   +   +L ++ +NAG + +  +   D      ++ FA N  G   
Sbjct: 60  DMSDPKQVWEFVEEFKEEGKKLHVLINNAGCMVNKRELTED----GLEKNFATNTLGTYI 115

Query: 131 CVKH 134
              H
Sbjct: 116 LTTH 119

Classical SDR-like subgroup containing human DHRS-12/FLJ13639, the 36K protein of zebrafish CNS myelin, and related proteins. DHRS-12/FLJ13639 is expressed in neurons and oligodendrocytes in the human cerebral cortex. Proteins in this subgroup share the glycine-rich NAD-binding motif of the classical SDRs, have a partial match to the canonical active site tetrad, but lack the typical active site Ser. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 255

>gnl|CDD|200089 TIGR01289, LPOR, light-dependent protochlorophyllide reductase

 Score = 38.7 bits (90), Expect = 0.002
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY--VHCDVTNE 75
            IITG +SG+G   A+  A  G   +++A        Q A S+G+ K  Y  +H D+ + 
Sbjct: 6   VIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSL 65

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGI 101
             V+  V    ++   LD +  NA +
Sbjct: 66  DSVRQFVQQFRESGRPLDALVCNAAV 91

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form [Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 314

>gnl|CDD|187658 cd08955, KR_2_FAS_SDR_x, beta-ketoacyl reductase (KR) domain of fatty acid synthase (FAS), subgroup 2, complex (x)

 Score = 38.4 bits (90), Expect = 0.002
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 19  IITGGASGIGETTARLFADHGARMIVI-------ADIQDELGRQVATSIGVGKCHYVHCD 71
           +ITGG  G+G   A    + GAR +V+       A  +  +         V     +  D
Sbjct: 153 LITGGLGGLGLLVAEWLVERGARHLVLTGRRAPSAAARQAIAALEEAGAEV---VVLAAD 209

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           V++   + A +     +   L  +   AG+L   D  + + D+  F ++ A  V+G
Sbjct: 210 VSDRDALAAALAQIRASLPPLRGVIHAAGVL--DDGVLANQDWERFRKVLAPKVQG 263

Ketoreductase, a module of the multidomain polyketide synthase, has 2 subdomains, each corresponding to a short-chain dehydrogenases/reductase (SDR) family monomer. The C-terminal subdomain catalyzes the NADPH-dependent reduction of the beta-carbonyl of a polyketide to a hydroxyl group, a step in the biosynthesis of polyketides, such as erythromycin. The N-terminal subdomain, an interdomain linker, is a truncated Rossmann fold which acts to stabilizes the catalytic subdomain. Unlike typical SDRs, the isolated domain does not oligomerizes but is composed of 2 subdomains, each resembling an SDR monomer. In some instances, as in porcine FAS, an enoyl reductase (a Rossman fold NAD binding domain of the MDR family) module is inserted between the sub-domains. The active site resembles that of typical SDRs, except that the usual positions of the catalytic asparagine and tyrosine are swapped, so that the canonical YXXXK motif changes to YXXXN. Modular polyketide synthases are multifunctional structures in which the makeup recapitulates that found in (and may have evolved from) fatty acid synthase. In some instances, such as porcine FAS , an enoyl reductase module is inserted between the sub-domains. Fatty acid synthesis occurs via the stepwise elongation of a chain (which is attached to acyl carrier protein, ACP) with 2-carbon units. Eukaryotic systems consists of large, multifunctional synthases (type I) while bacterial, type II systems, use single function proteins. Fungal fatty acid synthesis uses dodecamer of 6 alpha and 6 beta subunits. In mammalian type FAS cycles, ketoacyl synthase forms acetoacetyl-ACP which is reduced by the NADP-dependent beta-ketoacyl reductase (KR), forming beta-hydroxyacyl-ACP, which is in turn dehydrated by dehydratase to a beta-enoyl intermediate, which is reduced by NADP-dependent beta-enoyl reductase (ER). Polyketide syntheses also proceeds via the addition of 2-carbon units as in fatty acid synthesis. The complex SDR NADP binding motif, GGXGXXG, is often present, but is not strictly conserved in each instance of the module. This subfamily includes the KR domain of the Lyngbya majuscule Jam J, -K, and #L which are encoded on the jam gene cluster and are involved in the synthesis of the Jamaicamides (neurotoxins); Lyngbya majuscule Jam P belongs to a different KR_FAS_SDR_x subfamily. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type KRs have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 376

>gnl|CDD|169556 PRK08703, PRK08703, short chain dehydrogenase; Provisional

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 15/40 (37%), Positives = 25/40 (62%)

Query: 13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL 52
          L  K  ++TG + G+GE  A+ +A  GA +I++A  Q +L
Sbjct: 4  LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKL 43

Length = 239

>gnl|CDD|169553 PRK08690, PRK08690, enoyl-(acyl carrier protein) reductase; Provisional

 Score = 37.6 bits (87), Expect = 0.003
 Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 34/268 (12%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH 66
           L+GK  +ITG  S      GI +      A+     +V  D  +E  R++A  +      
Sbjct: 4   LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVV--DKLEERVRKMAAELDSELVF 61

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF------SAFDRL 120
              CDV ++ ++  +     +++  LD +  + G    + +  L  DF       AF+  
Sbjct: 62  --RCDVASDDEINQVFADLGKHWDGLDGLVHSIGF---APKEALSGDFLDSISREAFNTA 116

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH---MSKHAVIGLV 177
             I+   + A  K AAR M+ G  R S +   S  G+   +   +Y+   M+K ++   +
Sbjct: 117 HEISAYSLPALAK-AARPMMRG--RNSAIVALSYLGAV--RAIPNYNVMGMAKASLEAGI 171

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMPA-DEVEKLFEPQTPLEGVVLRAGHV 235
           R  +  LG  GIR N +S    A P+ T  A G+    ++        PL   V     V
Sbjct: 172 RFTAACLGKEGIRCNGIS----AGPIKTLAASGIADFGKLLGHVAAHNPLRRNV-TIEEV 226

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFLI 263
            +   FL    S  +TG    VDGG+ I
Sbjct: 227 GNTAAFLLSDLSSGITGEITYVDGGYSI 254

Length = 261

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	264
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07063	260	short chain dehydrogenase; Provisional	100.0
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	100.0
KOG0725	270	consensus Reductases with broad range of substrate	100.0
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06114	254	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	100.0
PRK05867	253	short chain dehydrogenase; Provisional	100.0
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	100.0
PRK07062	265	short chain dehydrogenase; Provisional	100.0
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK07478	254	short chain dehydrogenase; Provisional	100.0
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	100.0
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08340	259	glucose-1-dehydrogenase; Provisional	100.0
PRK08589	272	short chain dehydrogenase; Validated	100.0
PRK08265	261	short chain dehydrogenase; Provisional	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK08277	278	D-mannonate oxidoreductase; Provisional	100.0
PRK08085	254	gluconate 5-dehydrogenase; Provisional	100.0
PRK06398	258	aldose dehydrogenase; Validated	100.0
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	100.0
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	100.0
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	100.0
PRK06172	253	short chain dehydrogenase; Provisional	100.0
PRK07791	286	short chain dehydrogenase; Provisional	100.0
PRK12747	252	short chain dehydrogenase; Provisional	100.0
PRK07985	294	oxidoreductase; Provisional	100.0
PRK07523	255	gluconate 5-dehydrogenase; Provisional	100.0
PLN02253	280	xanthoxin dehydrogenase	100.0
PRK06841	255	short chain dehydrogenase; Provisional	100.0
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK06128	300	oxidoreductase; Provisional	100.0
PRK08936	261	glucose-1-dehydrogenase; Provisional	100.0
COG0300	265	DltE Short-chain dehydrogenases of various substra	100.0
PRK07035	252	short chain dehydrogenase; Provisional	100.0
PRK08643	256	acetoin reductase; Validated	100.0
PRK07067	257	sorbitol dehydrogenase; Provisional	100.0
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06125	259	short chain dehydrogenase; Provisional	100.0
PRK08303	305	short chain dehydrogenase; Provisional	100.0
PRK07097	265	gluconate 5-dehydrogenase; Provisional	100.0
PRK08226	263	short chain dehydrogenase; Provisional	100.0
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	100.0
PRK07856	252	short chain dehydrogenase; Provisional	100.0
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07831	262	short chain dehydrogenase; Provisional	100.0
PRK12743	256	oxidoreductase; Provisional	100.0
PRK09242	257	tropinone reductase; Provisional	100.0
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	100.0
PRK06523	260	short chain dehydrogenase; Provisional	100.0
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	100.0
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	100.0
PRK07677	252	short chain dehydrogenase; Provisional	100.0
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	100.0
PRK06124	256	gluconate 5-dehydrogenase; Provisional	100.0
PRK06483	236	dihydromonapterin reductase; Provisional	100.0
PRK06701	290	short chain dehydrogenase; Provisional	100.0
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK06940	275	short chain dehydrogenase; Provisional	100.0
PRK05717	255	oxidoreductase; Validated	100.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	100.0
PRK12938	246	acetyacetyl-CoA reductase; Provisional	100.0
PRK08628	258	short chain dehydrogenase; Provisional	100.0
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	100.0
PRK12939	250	short chain dehydrogenase; Provisional	100.0
PRK07576	264	short chain dehydrogenase; Provisional	100.0
PRK06500	249	short chain dehydrogenase; Provisional	100.0
PRK12742	237	oxidoreductase; Provisional	100.0
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK12744	257	short chain dehydrogenase; Provisional	100.0
PRK07890	258	short chain dehydrogenase; Provisional	100.0
PRK12937	245	short chain dehydrogenase; Provisional	100.0
TIGR02415	254	23BDH acetoin reductases. One member of this famil	100.0
PRK06949	258	short chain dehydrogenase; Provisional	100.0
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	100.0
PRK06138	252	short chain dehydrogenase; Provisional	100.0
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	100.0
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	100.0
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	100.0
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06057	255	short chain dehydrogenase; Provisional	100.0
PRK12935	247	acetoacetyl-CoA reductase; Provisional	100.0
PRK05872	296	short chain dehydrogenase; Provisional	100.0
PRK08278	273	short chain dehydrogenase; Provisional	100.0
PRK12824	245	acetoacetyl-CoA reductase; Provisional	100.0
PRK07814	263	short chain dehydrogenase; Provisional	100.0
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK08213	259	gluconate 5-dehydrogenase; Provisional	100.0
PRK06484	520	short chain dehydrogenase; Validated	100.0
PRK09186	256	flagellin modification protein A; Provisional	100.0
PRK07069	251	short chain dehydrogenase; Validated	100.0
PRK07774	250	short chain dehydrogenase; Provisional	100.0
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	100.0
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	100.0
PRK05875	276	short chain dehydrogenase; Provisional	100.0
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	100.0
PRK06947	248	glucose-1-dehydrogenase; Provisional	100.0
PRK08862	227	short chain dehydrogenase; Provisional	100.0
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	100.0
PRK05884	223	short chain dehydrogenase; Provisional	100.0
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	100.0
PRK06198	260	short chain dehydrogenase; Provisional	100.0
PRK07060	245	short chain dehydrogenase; Provisional	100.0
PRK06123	248	short chain dehydrogenase; Provisional	100.0
PRK06139	330	short chain dehydrogenase; Provisional	100.0
PRK05876	275	short chain dehydrogenase; Provisional	100.0
PRK12746	254	short chain dehydrogenase; Provisional	100.0
PRK09134	258	short chain dehydrogenase; Provisional	100.0
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	100.0
PRK05599	246	hypothetical protein; Provisional	100.0
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	100.0
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	100.0
PRK07577	234	short chain dehydrogenase; Provisional	100.0
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08703	239	short chain dehydrogenase; Provisional	100.0
PRK12827	249	short chain dehydrogenase; Provisional	100.0
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	100.0
PRK07074	257	short chain dehydrogenase; Provisional	100.0
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK07832	272	short chain dehydrogenase; Provisional	100.0
PRK07109	334	short chain dehydrogenase; Provisional	100.0
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06182	273	short chain dehydrogenase; Validated	100.0
PRK12828	239	short chain dehydrogenase; Provisional	100.0
PRK07825	273	short chain dehydrogenase; Provisional	100.0
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	100.0
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK12829	264	short chain dehydrogenase; Provisional	100.0
PRK07041	230	short chain dehydrogenase; Provisional	100.0
PRK09009	235	C factor cell-cell signaling protein; Provisional	100.0
PRK06924	251	short chain dehydrogenase; Provisional	100.0
PRK06196	315	oxidoreductase; Provisional	100.0
PRK08263	275	short chain dehydrogenase; Provisional	100.0
PRK08324	681	short chain dehydrogenase; Validated	100.0
PRK09135	249	pteridine reductase; Provisional	100.0
PLN00015	308	protochlorophyllide reductase	100.0
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	100.0
PLN02780	320	ketoreductase/ oxidoreductase	100.0
COG1028	251	FabG Dehydrogenases with different specificities (	100.0
PRK05993	277	short chain dehydrogenase; Provisional	100.0
PRK05855	582	short chain dehydrogenase; Validated	100.0
PRK07454	241	short chain dehydrogenase; Provisional	100.0
PRK06180	277	short chain dehydrogenase; Provisional	100.0
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	100.0
PRK10538	248	malonic semialdehyde reductase; Provisional	100.0
PRK05866	293	short chain dehydrogenase; Provisional	100.0
PRK07024	257	short chain dehydrogenase; Provisional	100.0
PRK05650	270	short chain dehydrogenase; Provisional	100.0
PRK07806	248	short chain dehydrogenase; Provisional	100.0
PRK05854	313	short chain dehydrogenase; Provisional	100.0
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	100.0
PRK06194	287	hypothetical protein; Provisional	100.0
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	100.0
PRK09072	263	short chain dehydrogenase; Provisional	100.0
PRK06914	280	short chain dehydrogenase; Provisional	100.0
PRK07775	274	short chain dehydrogenase; Provisional	100.0
PRK06197	306	short chain dehydrogenase; Provisional	100.0
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK06179	270	short chain dehydrogenase; Provisional	100.0
PRK07904	253	short chain dehydrogenase; Provisional	100.0
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	100.0
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	100.0
PRK08267	260	short chain dehydrogenase; Provisional	100.0
PRK07578	199	short chain dehydrogenase; Provisional	100.0
PRK08251	248	short chain dehydrogenase; Provisional	100.0
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	100.0
PRK06482	276	short chain dehydrogenase; Provisional	100.0
KOG1611	249	consensus Predicted short chain-type dehydrogenase	100.0
PRK05693	274	short chain dehydrogenase; Provisional	100.0
PRK06181	263	short chain dehydrogenase; Provisional	100.0
PRK07453	322	protochlorophyllide oxidoreductase; Validated	100.0
KOG1208	314	consensus Dehydrogenases with different specificit	100.0
PRK07023	243	short chain dehydrogenase; Provisional	100.0
PRK07326	237	short chain dehydrogenase; Provisional	100.0
PRK07102	243	short chain dehydrogenase; Provisional	100.0
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	100.0
PRK07201	657	short chain dehydrogenase; Provisional	100.0
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	100.0
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	100.0
PRK06101	240	short chain dehydrogenase; Provisional	100.0
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	100.0
PRK08264	238	short chain dehydrogenase; Validated	100.0
PRK08177	225	short chain dehydrogenase; Provisional	100.0
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.98
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.97
PRK12367	245	short chain dehydrogenase; Provisional	99.97
PRK06953	222	short chain dehydrogenase; Provisional	99.97
PRK08017	256	oxidoreductase; Provisional	99.97
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.97
PRK09291	257	short chain dehydrogenase; Provisional	99.97
PRK08219	227	short chain dehydrogenase; Provisional	99.97
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.96
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.94
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.92
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.92
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.92
PLN03209	576	translocon at the inner envelope of chloroplast su	99.91
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.91
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.91
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.88
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.88
PLN02653	340	GDP-mannose 4,6-dehydratase	99.88
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.87
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.87
PLN02214	342	cinnamoyl-CoA reductase	99.86
PLN02572	442	UDP-sulfoquinovose synthase	99.86
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.86
PLN02650	351	dihydroflavonol-4-reductase	99.85
PLN00198	338	anthocyanidin reductase; Provisional	99.84
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.84
PRK06720	169	hypothetical protein; Provisional	99.84
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.83
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.83
PLN02583	297	cinnamoyl-CoA reductase	99.83
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.83
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.83
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.82
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.82
PLN02240	352	UDP-glucose 4-epimerase	99.82
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.8
PLN02686	367	cinnamoyl-CoA reductase	99.8
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	99.78
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.78
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.77
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	99.77
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.76
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	99.76
PLN02427	386	UDP-apiose/xylose synthase	99.75
TIGR01746	367	Thioester-redct thioester reductase domain. It has	99.75
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	99.73
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	99.73
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	99.72
PLN02260	668	probable rhamnose biosynthetic enzyme	99.72
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	99.72
PLN02206	442	UDP-glucuronate decarboxylase	99.72
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	99.71
PLN02695	370	GDP-D-mannose-3',5'-epimerase	99.69
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.68
PLN02166	436	dTDP-glucose 4,6-dehydratase	99.68
CHL00194	317	ycf39 Ycf39; Provisional	99.67
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	99.66
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	99.66
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	99.66
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	99.65
PLN02996	491	fatty acyl-CoA reductase	99.59
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	99.59
PRK07201	657	short chain dehydrogenase; Provisional	99.58
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	99.58
PRK05865	854	hypothetical protein; Provisional	99.57
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	99.57
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	99.56
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	99.54
PLN02778	298	3,5-epimerase/4-reductase	99.48
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	99.47
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	99.43
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	99.42
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	99.41
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	99.4
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	99.4
PRK08309	177	short chain dehydrogenase; Provisional	99.38
COG3320	382	Putative dehydrogenase domain of multifunctional n	99.34
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	99.33
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	99.32
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	99.31
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.3
PRK12320	699	hypothetical protein; Provisional	99.3
PLN02503	605	fatty acyl-CoA reductase 2	99.3
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	99.28
PLN02260	668	probable rhamnose biosynthetic enzyme	99.27
PLN00016	378	RNA-binding protein; Provisional	99.25
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	99.19
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	99.19
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	99.16
COG4982	866	3-oxoacyl-[acyl-carrier protein]	98.89
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	98.85
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	98.84
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	98.72
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	98.67
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	98.65
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	98.63
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	98.63
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	98.63
PRK12548	289	shikimate 5-dehydrogenase; Provisional	98.6
COG2910	211	Putative NADH-flavin reductase [General function p	98.59
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	98.57
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	98.5
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	98.39
PLN00106	323	malate dehydrogenase	98.35
PRK09620	229	hypothetical protein; Provisional	98.33
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	98.1
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	98.09
PF04127	185	DFP: DNA / pantothenate metabolism flavoprotein; I	98.01
KOG2774	366	consensus NAD dependent epimerase [General functio	97.97
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.97
KOG4039	238	consensus Serine/threonine kinase TIP30/CC3 [Signa	97.96
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	97.91
PRK14982	340	acyl-ACP reductase; Provisional	97.89
PTZ00325	321	malate dehydrogenase; Provisional	97.87
cd01336	325	MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli	97.87
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	97.69
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	97.59
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	97.57
TIGR01758	324	MDH_euk_cyt malate dehydrogenase, NAD-dependent. T	97.46
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	97.43
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	97.39
cd00704	323	MDH Malate dehydrogenase. Malate dehydrogenase (MD	97.37
cd01338	322	MDH_choloroplast_like Chloroplast-like malate dehy	97.34
PRK13982	475	bifunctional SbtC-like/phosphopantothenoylcysteine	97.33
PRK06849	389	hypothetical protein; Provisional	97.32
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	97.28
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	97.26
KOG2733	423	consensus Uncharacterized membrane protein [Functi	97.23
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.21
PRK02472	447	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	97.21
PRK05086	312	malate dehydrogenase; Provisional	97.15
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	97.15
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	97.14
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.06
TIGR00715	256	precor6x_red precorrin-6x reductase. This enzyme w	96.91
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.89
PRK08306	296	dipicolinate synthase subunit A; Reviewed	96.85
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	96.84
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	96.83
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.82
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	96.82
PF12242	78	Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2	96.78
PF00056	141	Ldh_1_N: lactate/malate dehydrogenase, NAD binding	96.77
COG2130	340	Putative NADP-dependent oxidoreductases [General f	96.69
PRK00066	315	ldh L-lactate dehydrogenase; Reviewed	96.67
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	96.64
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	96.62
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	96.61
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	96.61
PLN00203	519	glutamyl-tRNA reductase	96.6
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.6
cd05291	306	HicDH_like L-2-hydroxyisocapronate dehydrogenases	96.59
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.53
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	96.5
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	96.5
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	96.49
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	96.48
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	96.47
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.46
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.46
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.45
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	96.45
PTZ00117	319	malate dehydrogenase; Provisional	96.41
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	96.38
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	96.34
PRK15116	268	sulfur acceptor protein CsdL; Provisional	96.34
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	96.33
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.32
cd05294	309	LDH-like_MDH_nadp A lactate dehydrogenases-like st	96.3
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	96.29
PF01113	124	DapB_N: Dihydrodipicolinate reductase, N-terminus;	96.28
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	96.26
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	96.23
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	96.19
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	96.17
COG3007	398	Uncharacterized paraquat-inducible protein B [Func	96.16
TIGR01772	312	MDH_euk_gproteo malate dehydrogenase, NAD-dependen	96.16
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	96.12
COG3268	382	Uncharacterized conserved protein [Function unknow	96.12
PRK09496	453	trkA potassium transporter peripheral membrane com	96.06
KOG4288	283	consensus Predicted oxidoreductase [General functi	96.06
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.02
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	95.98
COG0569	225	TrkA K+ transport systems, NAD-binding component [	95.98
PRK05690	245	molybdopterin biosynthesis protein MoeB; Provision	95.97
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.96
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	95.93
cd00757	228	ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1	95.93
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	95.92
PLN02928	347	oxidoreductase family protein	95.89
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.82
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	95.81
cd00650	263	LDH_MDH_like NAD-dependent, lactate dehydrogenase-	95.77
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	95.76
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	95.69
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	95.65
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.65
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	95.65
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	95.55
PTZ00082	321	L-lactate dehydrogenase; Provisional	95.54
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.53
PRK04308	445	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	95.52
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.52
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	95.51
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	95.5
TIGR01759	323	MalateDH-SF1 malate dehydrogenase. This model repr	95.44
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	95.43
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	95.39
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	95.35
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.33
cd01337	310	MDH_glyoxysomal_mitochondrial Glyoxysomal and mito	95.24
PLN00112	444	malate dehydrogenase (NADP); Provisional	95.23
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.23
PLN02968	381	Probable N-acetyl-gamma-glutamyl-phosphate reducta	95.22
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	95.21
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.19
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.19
cd05191	86	NAD_bind_amino_acid_DH NAD(P) binding domain of am	95.17
PRK06932	314	glycerate dehydrogenase; Provisional	95.14
COG2085	211	Predicted dinucleotide-binding enzymes [General fu	95.11
PRK05442	326	malate dehydrogenase; Provisional	95.1
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.07
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.06
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	95.03
cd05211	217	NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of	95.01
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	94.96
PRK09288	395	purT phosphoribosylglycinamide formyltransferase 2	94.95
PRK05597	355	molybdopterin biosynthesis protein MoeB; Validated	94.94
PRK12480	330	D-lactate dehydrogenase; Provisional	94.92
PF01118	121	Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi	94.87
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	94.85
PRK07574	385	formate dehydrogenase; Provisional	94.77
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	94.74
cd05293	312	LDH_1 A subgroup of L-lactate dehydrogenases. L-la	94.7
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	94.69
COG0039	313	Mdh Malate/lactate dehydrogenases [Energy producti	94.69
PRK14968	188	putative methyltransferase; Provisional	94.66
PRK13243	333	glyoxylate reductase; Reviewed	94.65
PLN02827	378	Alcohol dehydrogenase-like	94.62
PRK08223	287	hypothetical protein; Validated	94.62
cd01483	143	E1_enzyme_family Superfamily of activating enzymes	94.61
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.61
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.56
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.55
PRK06223	307	malate dehydrogenase; Reviewed	94.54
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	94.53
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	94.52
PRK00048	257	dihydrodipicolinate reductase; Provisional	94.52
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.52
PRK06487	317	glycerate dehydrogenase; Provisional	94.52
PLN02178	375	cinnamyl-alcohol dehydrogenase	94.52
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.49
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	94.47
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.47
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	94.46
PRK09496	453	trkA potassium transporter peripheral membrane com	94.45
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	94.44
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	94.43
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	94.38
PRK06719	157	precorrin-2 dehydrogenase; Validated	94.37
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	94.35
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	94.34
PRK14874	334	aspartate-semialdehyde dehydrogenase; Provisional	94.33
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	94.31
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.3
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.3
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	94.28
cd01492	197	Aos1_SUMO Ubiquitin activating enzyme (E1) subunit	94.28
cd01489	312	Uba2_SUMO Ubiquitin activating enzyme (E1) subunit	94.26
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.25
PLN02586	360	probable cinnamyl alcohol dehydrogenase	94.24
PLN02602	350	lactate dehydrogenase	94.22
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	94.22
PF12076	164	Wax2_C: WAX2 C-terminal domain; InterPro: IPR02194	94.2
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	94.18
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.16
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.16
PLN02740	381	Alcohol dehydrogenase-like	94.11
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.1
PTZ00354	334	alcohol dehydrogenase; Provisional	94.05
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.04
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	94.04
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	94.04
PRK08655	437	prephenate dehydrogenase; Provisional	94.01
TIGR01915	219	npdG NADPH-dependent F420 reductase. This model re	93.99
PLN02494	477	adenosylhomocysteinase	93.97
TIGR01763	305	MalateDH_bact malate dehydrogenase, NAD-dependent.	93.97
cd05292	308	LDH_2 A subgroup of L-lactate dehydrogenases. L-la	93.96
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	93.95
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	93.84
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	93.84
cd05290	307	LDH_3 A subgroup of L-lactate dehydrogenases. L-la	93.8
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	93.77
cd01076	227	NAD_bind_1_Glu_DH NAD(P) binding domain of glutama	93.76
COG1648	210	CysG Siroheme synthase (precorrin-2 oxidase/ferroc	93.76
PTZ00075	476	Adenosylhomocysteinase; Provisional	93.75

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=5.2e-52  Score=312.56  Aligned_cols=247  Identities=32%  Similarity=0.463  Sum_probs=219.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..++..|+++||||++|||+++++.|+++|++|++..++.....+.....-..+....+.||+++.++++..+++..+.+
T Consensus         9 ~~r~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~   88 (256)
T KOG1200|consen    9 VQRLMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSL   88 (256)
T ss_pred             HHHHhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhc
Confidence            34578899999999999999999999999999887777766544444333333566789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCCCCCCchhhc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      |.+++||||||+..+.  .+-....++|++++.+|+.|.|+.+|++...|...+ ...+|||+||+.+..+.-+...|++
T Consensus        89 g~psvlVncAGItrD~--~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAA  166 (256)
T KOG1200|consen   89 GTPSVLVNCAGITRDG--LLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAA  166 (256)
T ss_pred             CCCcEEEEcCcccccc--ceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhh
Confidence            9999999999999876  788899999999999999999999999999854432 1459999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+++.+|+|+.|+|++++|||||+|+||++.|||+...    ++...+.+..-.|+ +|+..+||||+.+.||+|+.++
T Consensus       167 sK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~m----p~~v~~ki~~~iPm-gr~G~~EevA~~V~fLAS~~ss  241 (256)
T KOG1200|consen  167 SKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAM----PPKVLDKILGMIPM-GRLGEAEEVANLVLFLASDASS  241 (256)
T ss_pred             hcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhc----CHHHHHHHHccCCc-cccCCHHHHHHHHHHHhccccc
Confidence            999999999999999999999999999999999999765    34556666777888 9999999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      |+||+.+.+|||+.|
T Consensus       242 YiTG~t~evtGGl~m  256 (256)
T KOG1200|consen  242 YITGTTLEVTGGLAM  256 (256)
T ss_pred             cccceeEEEeccccC
Confidence            999999999999875

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.6e-49  Score=325.46  Aligned_cols=249  Identities=24%  Similarity=0.324  Sum_probs=213.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|+++++++++++. +
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~-~   82 (263)
T PRK08339          4 IDLSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELK-N   82 (263)
T ss_pred             cCCCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHH-h
Confidence            357899999999999999999999999999988888876654333222211  2468899999999999999999986 5


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|+|++++ .|+||++||..+..+.+.+..|++
T Consensus        83 ~g~iD~lv~nag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~-~g~Ii~isS~~~~~~~~~~~~y~a  159 (263)
T PRK08339         83 IGEPDIFFFSTGGPKPG--YFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKG-FGRIIYSTSVAIKEPIPNIALSNV  159 (263)
T ss_pred             hCCCcEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcCccccCCCCcchhhHH
Confidence            89999999999986543  788899999999999999999999999999998876 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +|+|+++|+++++.|++++|||||+|+||+++|++.....       ....++..+.+....|. +|+.+|||++++++|
T Consensus       160 sKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~f  238 (263)
T PRK08339        160 VRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPL-GRLGEPEEIGYLVAF  238 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCc-ccCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999864321       11122333444555676 899999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++...++||+++.+|||+.++
T Consensus       239 L~s~~~~~itG~~~~vdgG~~~~  261 (263)
T PRK08339        239 LASDLGSYINGAMIPVDGGRLNS  261 (263)
T ss_pred             HhcchhcCccCceEEECCCcccc
Confidence            99999999999999999999764

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-48  Score=322.20  Aligned_cols=248  Identities=29%  Similarity=0.437  Sum_probs=212.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+..+......+. ...++.++++|++++++++++++++.+.++
T Consensus         4 ~~l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   82 (251)
T PRK12481          4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEA-LGRKFHFITADLIQQKDIDSIVSQAVEVMG   82 (251)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHH-cCCeEEEEEeCCCCHHHHHHHHHHHHHHcC
Confidence            4688999999999999999999999999999888777543222211111 124688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.++++|++.+++|+.+++.+++.++|.|.+++..|+||++||..+..+.+....|++||
T Consensus        83 ~iD~lv~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  160 (251)
T PRK12481         83 HIDILINNAGIIRRQ--DLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASK  160 (251)
T ss_pred             CCCEEEECCCcCCCC--CcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHH
Confidence            999999999987654  778899999999999999999999999999998754358999999999999888899999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|++.++.|++++||+||+|+||+++|++......  .+...+......|. +++.+||||++++.||+++...++
T Consensus       161 ~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~-~~~~~peeva~~~~~L~s~~~~~~  237 (251)
T PRK12481        161 SAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRA--DTARNEAILERIPA-SRWGTPDDLAGPAIFLSSSASDYV  237 (251)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhccc--ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999998764321  12222223345566 789999999999999999999999


Q ss_pred             eccEEEecCeeecC
Q 041914          251 TGHDLVVDGGFLIR  264 (264)
Q Consensus       251 ~G~~i~~dgG~~~~  264 (264)
                      +|++|.+|||+++|
T Consensus       238 ~G~~i~vdgg~~~~  251 (251)
T PRK12481        238 TGYTLAVDGGWLAR  251 (251)
T ss_pred             CCceEEECCCEecC
Confidence            99999999999876

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2.5e-48  Score=321.04  Aligned_cols=244  Identities=22%  Similarity=0.228  Sum_probs=209.4

Q ss_pred             cCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+++|+++||||+  +|||++++++|+++|++|++++|+ .+..+.+.+. ...++.++++|++|+++++++++++.+++
T Consensus         4 ~l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~-~~~~~~~~~~-~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (252)
T PRK06079          4 ILSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQN-DRMKKSLQKL-VDEEDLLVECDVASDESIERAFATIKERV   81 (252)
T ss_pred             ccCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCc-hHHHHHHHhh-ccCceeEEeCCCCCHHHHHHHHHHHHHHh
Confidence            3789999999999  899999999999999998888776 3333333332 22467889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           90 GQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++|+||||||+..+.  ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   .|+||+++|..+..+.+.+..|+
T Consensus        82 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~~Y~  158 (252)
T PRK06079         82 GKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNP---GASIVTLTYFGSERAIPNYNVMG  158 (252)
T ss_pred             CCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhccc---CceEEEEeccCccccCCcchhhH
Confidence            9999999999986532  247788999999999999999999999999999964   47999999999998889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|+++++.|++++||+||+|+||+++|++.....  ..++..+.+....|. +++.+||||++++.||++++.
T Consensus       159 asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedva~~~~~l~s~~~  235 (252)
T PRK06079        159 IAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIK--GHKDLLKESDSRTVD-GVGVTIEEVGNTAAFLLSDLS  235 (252)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCC--ChHHHHHHHHhcCcc-cCCCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999864331  122333334445566 889999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      ++++|+++.+|||+.+
T Consensus       236 ~~itG~~i~vdgg~~~  251 (252)
T PRK06079        236 TGVTGDIIYVDKGVHL  251 (252)
T ss_pred             ccccccEEEeCCceec
Confidence            9999999999999875

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.6e-48  Score=321.19  Aligned_cols=244  Identities=24%  Similarity=0.316  Sum_probs=204.8

Q ss_pred             CCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++|++|||||++  |||+++|++|+++|++|+++.|+.. ..+...+... .+...++++|++|.++++++++++.+++
T Consensus         5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~-~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~   83 (271)
T PRK06505          5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEA-LGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKW   83 (271)
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchH-HHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            6799999999996  9999999999999999888777543 2222222211 1233578999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           90 GQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      |++|+||||||+....  ..++.+.+.++|++++++|+.+++++++.++|+|.+   .|+||+++|..+..+.|.+..|+
T Consensus        84 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~  160 (271)
T PRK06505         84 GKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD---GGSMLTLTYGGSTRVMPNYNVMG  160 (271)
T ss_pred             CCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc---CceEEEEcCCCccccCCccchhh
Confidence            9999999999986432  136778999999999999999999999999999974   47999999999988889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|++.....  .............|. +++.+|||++++++||+++..
T Consensus       161 asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~peeva~~~~fL~s~~~  237 (271)
T PRK06505        161 VAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIG--DARAIFSYQQRNSPL-RRTVTIDEVGGSALYLLSDLS  237 (271)
T ss_pred             hhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCc--chHHHHHHHhhcCCc-cccCCHHHHHHHHHHHhCccc
Confidence            99999999999999999999999999999999999864321  111222233344566 788999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      .++||+.|.+|||+.+
T Consensus       238 ~~itG~~i~vdgG~~~  253 (271)
T PRK06505        238 SGVTGEIHFVDSGYNI  253 (271)
T ss_pred             cccCceEEeecCCccc
Confidence            9999999999999865

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.5e-47  Score=319.63  Aligned_cols=243  Identities=22%  Similarity=0.262  Sum_probs=203.6

Q ss_pred             CCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCch--hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           13 LEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQD--ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        13 l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++|++|||||+  +|||+++|++|+++|++|+++.|+.+  +..+.+.+.... . .++++|++|.++++++++++.++
T Consensus         3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~-~-~~~~~Dv~d~~~v~~~~~~i~~~   80 (274)
T PRK08415          3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGS-D-YVYELDVSKPEHFKSLAESLKKD   80 (274)
T ss_pred             cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCC-c-eEEEecCCCHHHHHHHHHHHHHH
Confidence            678999999997  89999999999999999888777642  122222222222 3 67899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|+||||||+....  ..++.+.+.++|++++++|+.+++++++.++|.|.+   .|+||++||..+..+.+.+..|
T Consensus        81 ~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~---~g~Iv~isS~~~~~~~~~~~~Y  157 (274)
T PRK08415         81 LGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLND---GASVLTLSYLGGVKYVPHYNVM  157 (274)
T ss_pred             cCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhcc---CCcEEEEecCCCccCCCcchhh
Confidence            99999999999986431  236788999999999999999999999999999975   4799999999999888999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+.+|+++++.|++++||+||+|+||+++|++.....  ..+..........|. +++.+||||+++++||+++.
T Consensus       158 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~pl-~r~~~pedva~~v~fL~s~~  234 (274)
T PRK08415        158 GVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIG--DFRMILKWNEINAPL-KKNVSIEEVGNSGMYLLSDL  234 (274)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccc--hhhHHhhhhhhhCch-hccCCHHHHHHHHHHHhhhh
Confidence            999999999999999999999999999999999998754321  111111222234566 78999999999999999998


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..++||+++.+|||+.+
T Consensus       235 ~~~itG~~i~vdGG~~~  251 (274)
T PRK08415        235 SSGVTGEIHYVDAGYNI  251 (274)
T ss_pred             hhcccccEEEEcCcccc
Confidence            99999999999999865

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-47  Score=315.79  Aligned_cols=246  Identities=23%  Similarity=0.258  Sum_probs=205.0

Q ss_pred             cCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++|++|||||++  |||+++|++|+++|++|++..|+ ++..+.+.+.... +...++++|++|+++++++++++.++
T Consensus         5 ~~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~-~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~   83 (260)
T PRK06603          5 LLQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQS-EVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEK   83 (260)
T ss_pred             ccCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCc-hHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHH
Confidence            36789999999997  99999999999999998777665 3222222222211 22346799999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|+||||+|+....  ..++.+.+.++|++.+++|+.+++.+++.++|+|++   .|+||++||..+..+.+.+..|
T Consensus        84 ~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y  160 (260)
T PRK06603         84 WGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHD---GGSIVTLTYYGAEKVIPNYNVM  160 (260)
T ss_pred             cCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CceEEEEecCccccCCCcccch
Confidence            99999999999975421  136778999999999999999999999999999964   4799999999998888999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.....  ..++..+......|. +|+.+|||++++++||+++.
T Consensus       161 ~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedva~~~~~L~s~~  237 (260)
T PRK06603        161 GVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIG--DFSTMLKSHAATAPL-KRNTTQEDVGGAAVYLFSEL  237 (260)
T ss_pred             hhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCC--CcHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999754321  112222333345576 78999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..++||++|.+|||+.++
T Consensus       238 ~~~itG~~i~vdgG~~~~  255 (260)
T PRK06603        238 SKGVTGEIHYVDCGYNIM  255 (260)
T ss_pred             cccCcceEEEeCCccccc
Confidence            999999999999998763

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.2e-47  Score=315.22  Aligned_cols=249  Identities=24%  Similarity=0.290  Sum_probs=210.0

Q ss_pred             ccccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCch--hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQD--ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         9 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      |++++++|+++||||+  +|||+++|++|+++|++|+++.|+..  +..+++.+.....++.++++|++|++++++++++
T Consensus         1 ~~~~~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   80 (257)
T PRK08594          1 MMLSLEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFET   80 (257)
T ss_pred             CccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHH
Confidence            3567899999999997  89999999999999999888876532  2233444443334688999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~  162 (264)
                      +.+++|++|++|||||+....  ..++.+.+.++|++.+++|+.+++.+++.++|+|.+   .|+||++||..+..+.+.
T Consensus        81 ~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~isS~~~~~~~~~  157 (257)
T PRK08594         81 IKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTE---GGSIVTLTYLGGERVVQN  157 (257)
T ss_pred             HHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhccc---CceEEEEcccCCccCCCC
Confidence            999999999999999976431  236778999999999999999999999999999964   479999999999999899


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      +..|++||+|+++|+++++.|++++||+||+|+||+++|++......  .++..+.+....|. +++.+|||+++.++||
T Consensus       158 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~p~~va~~~~~l  234 (257)
T PRK08594        158 YNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGG--FNSILKEIEERAPL-RRTTTQEEVGDTAAFL  234 (257)
T ss_pred             CchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhcc--ccHHHHHHhhcCCc-cccCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999997543211  11222223344566 7889999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++..+++||+++.+|||+.+
T Consensus       235 ~s~~~~~~tG~~~~~dgg~~~  255 (257)
T PRK08594        235 FSDLSRGVTGENIHVDSGYHI  255 (257)
T ss_pred             cCcccccccceEEEECCchhc
Confidence            999999999999999999864

>PRK07063 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.8e-47  Score=314.81  Aligned_cols=250  Identities=30%  Similarity=0.403  Sum_probs=214.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++++|++|++++.++++++.
T Consensus         2 ~~~l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   81 (260)
T PRK07063          2 MNRLAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAE   81 (260)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3458899999999999999999999999999988888876554433333222   3468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||.....  +..+.+.++|++.+++|+.+++.++++++|+|.+++ .++||++||..+..+.++...|
T Consensus        82 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  158 (260)
T PRK07063         82 EAFGPLDVLVNNAGINVFA--DPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERG-RGSIVNIASTHAFKIIPGCFPY  158 (260)
T ss_pred             HHhCCCcEEEECCCcCCCC--ChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhC-CeEEEEECChhhccCCCCchHH
Confidence            9999999999999986544  566788999999999999999999999999998776 6899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +++|+|+++|++.++.|++++||+||+|+||+++|++.......  ..+..........|. +++.+|+|++++++||++
T Consensus       159 ~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~~~~va~~~~fl~s  237 (260)
T PRK07063        159 PVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM-KRIGRPEEVAMTAVFLAS  237 (260)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999986543211  112222233344566 789999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...++||++|.+|||+++
T Consensus       238 ~~~~~itG~~i~vdgg~~~  256 (260)
T PRK07063        238 DEAPFINATCITIDGGRSV  256 (260)
T ss_pred             ccccccCCcEEEECCCeee
Confidence            9999999999999999875

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-47  Score=315.46  Aligned_cols=246  Identities=21%  Similarity=0.248  Sum_probs=205.1

Q ss_pred             cCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++|++|||||  ++|||+++|++|+++|++|++..|.. ...+.+.+.... +....++||++|+++++++++++.++
T Consensus         3 ~~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (261)
T PRK08690          3 FLQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKH   81 (261)
T ss_pred             ccCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHH
Confidence            378999999997  67999999999999999987776643 222333332221 34567899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCC---CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           89 YGQLDIMFSNAGILSSSD---QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      ++++|+||||||+.....   ..+++.+.++|++++++|+.+++++++.++|.|+++  .|+||++||..+..+.+++..
T Consensus        82 ~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~~~~~~~~~~~~  159 (261)
T PRK08690         82 WDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYLGAVRAIPNYNV  159 (261)
T ss_pred             hCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEcccccccCCCCccc
Confidence            999999999999875321   124567889999999999999999999999999754  479999999999989999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++|+|+.+|++.++.|++++||+||+|+||+++|++.....  ..++..+.+....|. +|+.+|||||+++.||+++
T Consensus       160 Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~peevA~~v~~l~s~  236 (261)
T PRK08690        160 MGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIA--DFGKLLGHVAAHNPL-RRNVTIEEVGNTAAFLLSD  236 (261)
T ss_pred             chhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCC--chHHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999865431  112333333445676 7899999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ...++||++|.+|||+.+
T Consensus       237 ~~~~~tG~~i~vdgG~~~  254 (261)
T PRK08690        237 LSSGITGEITYVDGGYSI  254 (261)
T ss_pred             ccCCcceeEEEEcCCccc
Confidence            999999999999999864

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=100.00  E-value=3e-47  Score=315.60  Aligned_cols=247  Identities=24%  Similarity=0.313  Sum_probs=206.3

Q ss_pred             ccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCch--hhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQD--ELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        11 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      +++.+|+++||||+  +|||+++|++|+++|++|+++.++.+  +..+.+.+.... ..+.++++|++|+++++++++++
T Consensus         2 ~~l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   81 (258)
T PRK07370          2 LDLTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETI   81 (258)
T ss_pred             cccCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHH
Confidence            46789999999986  89999999999999999877765432  111222222111 34678999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      .++++++|+||||||+....  ..++.+.+.++|++++++|+.+++.+++.++|.|++   .|+||++||..+..+.+++
T Consensus        82 ~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~  158 (258)
T PRK07370         82 KQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYLGGVRAIPNY  158 (258)
T ss_pred             HHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEeccccccCCccc
Confidence            99999999999999976421  236788999999999999999999999999999975   4799999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++......  .++..+.+....|. +|+.+|||+++++.||+
T Consensus       159 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~~~dva~~~~fl~  235 (258)
T PRK07370        159 NVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGG--ILDMIHHVEEKAPL-RRTVTQTEVGNTAAFLL  235 (258)
T ss_pred             chhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhcccc--chhhhhhhhhcCCc-CcCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999998643211  12222333334566 78999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++...++||+++.+|||+.+
T Consensus       236 s~~~~~~tG~~i~vdgg~~~  255 (258)
T PRK07370        236 SDLASGITGQTIYVDAGYCI  255 (258)
T ss_pred             ChhhccccCcEEEECCcccc
Confidence            99999999999999999864

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=100.00  E-value=1.1e-46  Score=311.30  Aligned_cols=250  Identities=38%  Similarity=0.601  Sum_probs=213.4

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ++..|.||+++|||+++|||+++|++|++.|++|++.+|+.+...+...+...    ..++..+.||+++++++++++++
T Consensus         2 ~~~~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~   81 (270)
T KOG0725|consen    2 SGGRLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEF   81 (270)
T ss_pred             CCccCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHH
Confidence            35679999999999999999999999999999988888888776555544432    24689999999999999999999


Q ss_pred             HHHh-cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHH-HHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC
Q 041914           85 TVQN-YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR-GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        85 ~~~~-~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~  162 (264)
                      ..++ +|++|+||||||...... ++.+.+.++|++++++|+. +.+.+.+.+.|++++++ .+.|+++||..+..+.++
T Consensus        82 ~~~~~~GkidiLvnnag~~~~~~-~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~-gg~I~~~ss~~~~~~~~~  159 (270)
T KOG0725|consen   82 AVEKFFGKIDILVNNAGALGLTG-SILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSK-GGSIVNISSVAGVGPGPG  159 (270)
T ss_pred             HHHHhCCCCCEEEEcCCcCCCCC-ChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcC-CceEEEEeccccccCCCC
Confidence            9998 699999999999987653 7999999999999999999 57777777777777766 899999999999988666


Q ss_pred             C-chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh---HHHHhh--cCCCCCCCCCCCChHHHH
Q 041914          163 R-TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA---DEVEKL--FEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       163 ~-~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~edva  236 (264)
                      . ..|+++|+|+++|+|.+|.|++++|||||+|+||++.|++ . ......   ++..+.  .....|. +|+..|+|++
T Consensus       160 ~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~-~-~~~~~~~~~~~~~~~~~~~~~~p~-gr~g~~~eva  236 (270)
T KOG0725|consen  160 SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSL-R-AAGLDDGEMEEFKEATDSKGAVPL-GRVGTPEEVA  236 (270)
T ss_pred             CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCc-c-ccccccchhhHHhhhhcccccccc-CCccCHHHHH
Confidence            5 8999999999999999999999999999999999999998 2 112121   233332  3344566 9999999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +.+.||++++.+|++|++|.+|||+++
T Consensus       237 ~~~~fla~~~asyitG~~i~vdgG~~~  263 (270)
T KOG0725|consen  237 EAAAFLASDDASYITGQTIIVDGGFTV  263 (270)
T ss_pred             HhHHhhcCcccccccCCEEEEeCCEEe
Confidence            999999999888999999999999986

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.3e-46  Score=311.84  Aligned_cols=246  Identities=22%  Similarity=0.288  Sum_probs=207.6

Q ss_pred             cccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhh--HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIGVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+++++|++|||||+  +|||++++++|+++|++|+++.|+.+..  .+.+.+..  ....++++|++|.++++++++++
T Consensus         5 ~~~~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~   82 (258)
T PRK07533          5 LLPLAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--DAPIFLPLDVREPGQLEAVFARI   82 (258)
T ss_pred             ccccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--ccceEEecCcCCHHHHHHHHHHH
Confidence            345789999999998  5999999999999999988887764321  22222222  23568899999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      .++++++|+||||||+....  ..++.+.+.++|++++++|+.+++++++.++|+|++   .|+||++||..+..+.+.+
T Consensus        83 ~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~---~g~Ii~iss~~~~~~~~~~  159 (258)
T PRK07533         83 AEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTN---GGSLLTMSYYGAEKVVENY  159 (258)
T ss_pred             HHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhcc---CCEEEEEeccccccCCccc
Confidence            99999999999999986431  236788999999999999999999999999999964   4799999999998888899


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|+++|+|+.+|+++++.|++++||+||+|+||+++|++......  .++..+.+....|. +++.+|+|+++.++||+
T Consensus       160 ~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~p~dva~~~~~L~  236 (258)
T PRK07533        160 NLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDD--FDALLEDAAERAPL-RRLVDIDDVGAVAAFLA  236 (258)
T ss_pred             hhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCC--cHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999998754321  12222333445676 78999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++..+++|+.+.+|||+.+
T Consensus       237 s~~~~~itG~~i~vdgg~~~  256 (258)
T PRK07533        237 SDAARRLTGNTLYIDGGYHI  256 (258)
T ss_pred             ChhhccccCcEEeeCCcccc
Confidence            99899999999999999864

>PRK06114 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-46  Score=310.81  Aligned_cols=248  Identities=32%  Similarity=0.468  Sum_probs=212.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +++++++|++|||||++|||+++|++|+++|++|+++.|+.++..+.+.+.+.  ..++.++++|++|++++.++++++.
T Consensus         2 ~~~~~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~   81 (254)
T PRK06114          2 QLFDLDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTE   81 (254)
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            56779999999999999999999999999999998888876543333333332  2367889999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC--CCc
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK--RRT  164 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~--~~~  164 (264)
                      +.++++|+||||+|+....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.+  ...
T Consensus        82 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~  158 (254)
T PRK06114         82 AELGALTLAVNAAGIANAN--PAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENG-GGSIVNIASMSGIIVNRGLLQA  158 (254)
T ss_pred             HHcCCCCEEEECCCCCCCC--ChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCCcc
Confidence            9999999999999987654  778899999999999999999999999999998876 78999999999876554  368


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+++|+|+++|+++++.|++++||+||+|+||+++|++....   ...+..+.+....|. +|+.+|||+++.++||++
T Consensus       159 ~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~---~~~~~~~~~~~~~p~-~r~~~~~dva~~~~~l~s  234 (254)
T PRK06114        159 HYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP---EMVHQTKLFEEQTPM-QRMAKVDEMVGPAVFLLS  234 (254)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc---cchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcC
Confidence            8999999999999999999999999999999999999986431   111222334455676 889999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +..+++||++|.+|||+.+
T Consensus       235 ~~~~~~tG~~i~~dgg~~~  253 (254)
T PRK06114        235 DAASFCTGVDLLVDGGFVC  253 (254)
T ss_pred             ccccCcCCceEEECcCEec
Confidence            9999999999999999874

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=100.00  E-value=2.5e-46  Score=294.60  Aligned_cols=228  Identities=32%  Similarity=0.454  Sum_probs=201.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..+++|+++|||||+|||.++|++|++.|++|+++.|+.+.+ ++++.++..+++.++.+|++|.++++.+++.+.++|+
T Consensus         2 ~~~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL-~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g   80 (246)
T COG4221           2 TTLKGKVALITGASSGIGEATARALAEAGAKVVLAARREERL-EALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG   80 (246)
T ss_pred             CCCCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHH-HHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC
Confidence            456789999999999999999999999999999999987776 4455555446789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||.....  ++.+.+.++|++++++|+.|.++.+++++|.|.+++ .|.||++||+.+..+.|+...|+++|
T Consensus        81 ~iDiLvNNAGl~~g~--~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~-~G~IiN~~SiAG~~~y~~~~vY~ATK  157 (246)
T COG4221          81 RIDILVNNAGLALGD--PLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERK-SGHIINLGSIAGRYPYPGGAVYGATK  157 (246)
T ss_pred             cccEEEecCCCCcCC--hhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcC-CceEEEeccccccccCCCCccchhhH
Confidence            999999999988764  899999999999999999999999999999999998 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++..|++.|+.|+..++|||.+|.||.+.|+.+........++..+.....    ...++|+|+|+.+.|.++..
T Consensus       158 ~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~~~~y~~----~~~l~p~dIA~~V~~~~~~P  229 (246)
T COG4221         158 AAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERADKVYKG----GTALTPEDIAEAVLFAATQP  229 (246)
T ss_pred             HHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhHHHHhcc----CCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999988877766554333333332111    44679999999999998754

>PRK05867 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-46  Score=310.02  Aligned_cols=244  Identities=38%  Similarity=0.589  Sum_probs=207.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.+.  ..++.++.+|++|+++++++++++.+.
T Consensus         5 ~~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (253)
T PRK05867          5 FDLHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEK-LADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAE   83 (253)
T ss_pred             ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45889999999999999999999999999998888877655433 333322  246788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-C-CCchh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-K-RRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-~-~~~~y  166 (264)
                      ++++|+||||+|.....  ++.+.+.++|++++++|+.+++.+++.++|.|.+++..++||++||..+..+. + .+..|
T Consensus        84 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y  161 (253)
T PRK05867         84 LGGIDIAVCNAGIITVT--PMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHY  161 (253)
T ss_pred             hCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccch
Confidence            99999999999987554  77889999999999999999999999999999876535799999998876433 3 45789


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++|+|+++|+++++.|++++||+||+|+||+++|++....     .+..+.+....|. +++.+|+|||++++||+++.
T Consensus       162 ~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~-----~~~~~~~~~~~~~-~r~~~p~~va~~~~~L~s~~  235 (253)
T PRK05867        162 CASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPY-----TEYQPLWEPKIPL-GRLGRPEELAGLYLYLASEA  235 (253)
T ss_pred             HHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccc-----hHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999986532     1222233344566 78999999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..++||++|.+|||+.+
T Consensus       236 ~~~~tG~~i~vdgG~~~  252 (253)
T PRK05867        236 SSYMTGSDIVIDGGYTC  252 (253)
T ss_pred             cCCcCCCeEEECCCccC
Confidence            99999999999999864

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=3e-46  Score=310.09  Aligned_cols=251  Identities=25%  Similarity=0.342  Sum_probs=214.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ++.++++|++|||||++|||++++++|+++|++|+++.++..+..+.+.+.+.   ..++.++++|++|+++++++++++
T Consensus         2 ~~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   81 (260)
T PRK08416          2 MSNEMKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKI   81 (260)
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999988887765544443333321   246889999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCC----CCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSS----SDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      .+.++++|+||||||+...    ...++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+
T Consensus        82 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~  160 (260)
T PRK08416         82 DEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVG-GGSIISLSSTGNLVYIE  160 (260)
T ss_pred             HHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccC-CEEEEEEeccccccCCC
Confidence            9999999999999987532    123677888999999999999999999999999998876 68999999999988889


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      .+..|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ..++..+.+....|. +++.+|+|++++++|
T Consensus       161 ~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~--~~~~~~~~~~~~~~~-~r~~~p~~va~~~~~  237 (260)
T PRK08416        161 NYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFT--NYEEVKAKTEELSPL-NRMGQPEDLAGACLF  237 (260)
T ss_pred             CcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhcc--CCHHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999865432  123333344445566 789999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeec
Q 041914          242 LACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |+++...+++|+.+.+|||+.+
T Consensus       238 l~~~~~~~~~G~~i~vdgg~~~  259 (260)
T PRK08416        238 LCSEKASWLTGQTIVVDGGTTF  259 (260)
T ss_pred             HcChhhhcccCcEEEEcCCeec
Confidence            9999899999999999999876

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.6e-46  Score=311.30  Aligned_cols=244  Identities=24%  Similarity=0.296  Sum_probs=203.4

Q ss_pred             cCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCch--hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQD--ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++|++|||||+  +|||+++|++|+++|++|+++.|+..  +..+.+.+..  +....+++|++|+++++++++++.+
T Consensus         7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~   84 (272)
T PRK08159          7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAEL--GAFVAGHCDVTDEASIDAVFETLEK   84 (272)
T ss_pred             cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhc--CCceEEecCCCCHHHHHHHHHHHHH
Confidence            4678999999997  89999999999999999877766532  2222222222  2356789999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           88 NYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      +++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.+++.++|+|++   .|+||++||..+..+.|.+..
T Consensus        85 ~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~iss~~~~~~~p~~~~  161 (272)
T PRK08159         85 KWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTD---GGSILTLTYYGAEKVMPHYNV  161 (272)
T ss_pred             hcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCcchh
Confidence            999999999999986532  236778999999999999999999999999999964   479999999998888899999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+.+|+++++.|++++||+||+|+||+++|++.....  ..+..........|. +|+.+|||+|++++||+++
T Consensus       162 Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~peevA~~~~~L~s~  238 (272)
T PRK08159        162 MGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIG--DFRYILKWNEYNAPL-RRTVTIEEVGDSALYLLSD  238 (272)
T ss_pred             hhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCC--cchHHHHHHHhCCcc-cccCCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999998764321  111111222224566 7889999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ...++||++|.+|||+.+
T Consensus       239 ~~~~itG~~i~vdgG~~~  256 (272)
T PRK08159        239 LSRGVTGEVHHVDSGYHV  256 (272)
T ss_pred             cccCccceEEEECCCcee
Confidence            999999999999999875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.5e-46  Score=309.49  Aligned_cols=244  Identities=23%  Similarity=0.239  Sum_probs=201.2

Q ss_pred             cCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCch--hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQD--ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++|++|||||  ++|||+++|++|+++|++|+++.+...  +..+.+.+..  +...++++|++|+++++++++++.+
T Consensus         3 ~l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~   80 (260)
T PRK06997          3 FLAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--GSDLVFPCDVASDEQIDALFASLGQ   80 (260)
T ss_pred             ccCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhc--CCcceeeccCCCHHHHHHHHHHHHH
Confidence            478999999996  689999999999999999877764322  2222222222  2235789999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCC---CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           88 NYGQLDIMFSNAGILSSSD---QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +++++|+||||||+.....   ..+++.+.++|++.+++|+.+++++++.++|+|.+   .|+||++||..+..+.+.+.
T Consensus        81 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~---~g~Ii~iss~~~~~~~~~~~  157 (260)
T PRK06997         81 HWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERVVPNYN  157 (260)
T ss_pred             HhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCC---CceEEEEeccccccCCCCcc
Confidence            9999999999999864321   12456889999999999999999999999999943   47999999999988889999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|++||+|+.+|+++++.|++++||+||+|+||+++|++.....  ..++..+.+....|. ++..+||||++++.||++
T Consensus       158 ~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedva~~~~~l~s  234 (260)
T PRK06997        158 TMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIK--DFGKILDFVESNAPL-RRNVTIEEVGNVAAFLLS  234 (260)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhcccc--chhhHHHHHHhcCcc-cccCCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999998754321  112222233334566 789999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...++||++|.+|||+.+
T Consensus       235 ~~~~~itG~~i~vdgg~~~  253 (260)
T PRK06997        235 DLASGVTGEITHVDSGFNA  253 (260)
T ss_pred             ccccCcceeEEEEcCChhh
Confidence            9999999999999999754

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=100.00  E-value=1.5e-45  Score=304.66  Aligned_cols=247  Identities=27%  Similarity=0.435  Sum_probs=210.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|++||||+++|||++++++|+++|++|+++.+...+ ..+.+.+ . ..++.++++|++|.++++++++++.+++
T Consensus         6 ~~l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~-~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (253)
T PRK08993          6 FSLEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTA-L-GRRFLSLTADLRKIDGIPALLERAVAEF   83 (253)
T ss_pred             cCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHh-c-CCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            36889999999999999999999999999998777654322 1222221 1 2367889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||||.....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+++..|+||++||..+..+.+....|+++
T Consensus        84 ~~~D~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~s  161 (253)
T PRK08993         84 GHIDILVNNAGLIRRE--DAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTAS  161 (253)
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHH
Confidence            9999999999986544  67889999999999999999999999999999876435899999999999988889999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|++++++.++.|+.++||+||+|+||+++|++......  .+.....+....|. +++.+|+|+++.+.||+++...+
T Consensus       162 Kaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~p~eva~~~~~l~s~~~~~  238 (253)
T PRK08993        162 KSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRA--DEQRSAEILDRIPA-GRWGLPSDLMGPVVFLASSASDY  238 (253)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhcc--chHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999998754321  12222233345566 78999999999999999999999


Q ss_pred             eeccEEEecCeeecC
Q 041914          250 VTGHDLVVDGGFLIR  264 (264)
Q Consensus       250 ~~G~~i~~dgG~~~~  264 (264)
                      ++|+++.+|||+.+|
T Consensus       239 ~~G~~~~~dgg~~~~  253 (253)
T PRK08993        239 INGYTIAVDGGWLAR  253 (253)
T ss_pred             ccCcEEEECCCEecC
Confidence            999999999999886

>PRK07062 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-45  Score=306.95  Aligned_cols=250  Identities=25%  Similarity=0.360  Sum_probs=213.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++++|++|.++++++++++.
T Consensus         3 ~~~l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T PRK07062          3 QIQLEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVE   82 (265)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHH
Confidence            4578999999999999999999999999999998888876655433322221   2368889999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|
T Consensus        83 ~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y  159 (265)
T PRK07062         83 ARFGGVDMLVNNAGQGRVS--TFADTTDDAWRDELELKYFSVINPTRAFLPLLRASA-AASIVCVNSLLALQPEPHMVAT  159 (265)
T ss_pred             HhcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CcEEEEeccccccCCCCCchHh
Confidence            9999999999999986544  788899999999999999999999999999998876 6899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC------CChHHHHhhc--CCCCCCCCCCCChHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG------MPADEVEKLF--EPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~~edva~~  238 (264)
                      +++|+|+.+|+++++.|++++||+||+|+||+++|++......      ...+...+.+  ....|. +++.+|+|++++
T Consensus       160 ~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~~va~~  238 (265)
T PRK07062        160 SAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPL-GRLGRPDEAARA  238 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCc-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999998643211      1112222211  234566 789999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeec
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++||+++...++||++|.+|||+..
T Consensus       239 ~~~L~s~~~~~~tG~~i~vdgg~~~  263 (265)
T PRK07062        239 LFFLASPLSSYTTGSHIDVSGGFAR  263 (265)
T ss_pred             HHHHhCchhcccccceEEEcCceEe
Confidence            9999998899999999999999864

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=7.6e-46  Score=306.87  Aligned_cols=247  Identities=25%  Similarity=0.235  Sum_probs=204.6

Q ss_pred             cccCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCc-hhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQ-DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      |.++++|+++||||  ++|||++++++|+++|++|+++.|+. ++..+.+.+.... ++.++++|++|+++++++++++.
T Consensus         2 ~~~~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~i~~~~~~~~   80 (256)
T PRK07889          2 MGLLEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPE-PAPVLELDVTNEEHLASLADRVR   80 (256)
T ss_pred             cccccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCC-CCcEEeCCCCCHHHHHHHHHHHH
Confidence            45588999999999  89999999999999999988877654 3333444443332 56789999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           87 QNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +.++++|+||||||+....  ..++.+.++++|++.+++|+.+++.+++.++|+|++   .|+||++++.. ..+.+.+.
T Consensus        81 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~---~g~Iv~is~~~-~~~~~~~~  156 (256)
T PRK07889         81 EHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNE---GGSIVGLDFDA-TVAWPAYD  156 (256)
T ss_pred             HHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhccc---CceEEEEeecc-cccCCccc
Confidence            9999999999999986432  125778899999999999999999999999999974   47999998653 45567788


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ..++..+.+....|..+++.+|+|||+.++||++
T Consensus       157 ~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~~~~~~~p~evA~~v~~l~s  234 (256)
T PRK07889        157 WMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIP--GFELLEEGWDERAPLGWDVKDPTPVARAVVALLS  234 (256)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhccc--CcHHHHHHHHhcCccccccCCHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999865432  1122233334455663368999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|+++.+|||+.+
T Consensus       235 ~~~~~~tG~~i~vdgg~~~  253 (256)
T PRK07889        235 DWFPATTGEIVHVDGGAHA  253 (256)
T ss_pred             cccccccceEEEEcCceec
Confidence            9899999999999999864

>PRK07478 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-45  Score=304.87  Aligned_cols=248  Identities=36%  Similarity=0.529  Sum_probs=211.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|++|||||++|||++++++|+++|++|++++|+.++..+...+... ..++.++.+|++++++++++++++.+++
T Consensus         2 ~~~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T PRK07478          2 MRLNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERF   81 (254)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999988888876655433332222 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~  168 (264)
                      +++|+||||||+.... .++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+. .+.+++..|++
T Consensus        82 ~~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~  159 (254)
T PRK07478         82 GGLDIAFNNAGTLGEM-GPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARG-GGSLIFTSTFVGHTAGFPGMAAYAA  159 (254)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEechHhhccCCCCcchhHH
Confidence            9999999999986432 3677889999999999999999999999999998876 7899999999886 57788999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ||++++.|++.++.|++++||+||+|+||+++|++......  .++.........|. +++.+|+|+++.++||+++...
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~  236 (254)
T PRK07478        160 SKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGD--TPEALAFVAGLHAL-KRMAQPEEIAQAALFLASDAAS  236 (254)
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccC--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999999998754321  12222333334455 7889999999999999998899


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||+++
T Consensus       237 ~~~G~~~~~dgg~~~  251 (254)
T PRK07478        237 FVTGTALLVDGGVSI  251 (254)
T ss_pred             CCCCCeEEeCCchhc
Confidence            999999999999764

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=100.00  E-value=1.2e-45  Score=310.12  Aligned_cols=248  Identities=21%  Similarity=0.244  Sum_probs=201.8

Q ss_pred             ccccCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh----------CCC----cEEEEEecC
Q 041914            9 AKNKLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----------GVG----KCHYVHCDV   72 (264)
Q Consensus         9 ~~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~----------~~~----~~~~~~~D~   72 (264)
                      ..++|+||++|||||  ++|||+++|+.|+++|++|++ .|+...+.+...+..          ..+    ....+++|+
T Consensus         3 ~~~~l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~   81 (303)
T PLN02730          3 LPIDLRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDA   81 (303)
T ss_pred             CCcCCCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecce
Confidence            345699999999999  899999999999999999776 665444322211111          001    146788998


Q ss_pred             --CC------------------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHH
Q 041914           73 --TN------------------ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV  132 (264)
Q Consensus        73 --s~------------------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~  132 (264)
                        ++                  .++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++.++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~  161 (303)
T PLN02730         82 VFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLL  161 (303)
T ss_pred             ecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence              43                  4489999999999999999999999865432247889999999999999999999999


Q ss_pred             HHHHHHHHcCCCCcEEEEecCCCCCCCCCCC-chhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCC
Q 041914          133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRR-TDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGM  210 (264)
Q Consensus       133 ~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~  210 (264)
                      |.++|.|++   .|+||++||..+..+.+++ ..|++||+|+++|+++++.|+++ +|||||+|+||+++|+|.... ..
T Consensus       162 ~~~~p~m~~---~G~II~isS~a~~~~~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~-~~  237 (303)
T PLN02730        162 QHFGPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI-GF  237 (303)
T ss_pred             HHHHHHHhc---CCEEEEEechhhcCCCCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc-cc
Confidence            999999976   3799999999998888865 48999999999999999999986 799999999999999987542 11


Q ss_pred             ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          211 PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                       .++.........|. +++.+|+|+++.++||+++...+++|+.+.+|||+++
T Consensus       238 -~~~~~~~~~~~~pl-~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG~~~  288 (303)
T PLN02730        238 -IDDMIEYSYANAPL-QKELTADEVGNAAAFLASPLASAITGATIYVDNGLNA  288 (303)
T ss_pred             -cHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCccCCEEEECCCccc
Confidence             12222222334465 6889999999999999999999999999999999875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.6e-45  Score=305.63  Aligned_cols=244  Identities=20%  Similarity=0.266  Sum_probs=201.7

Q ss_pred             CCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++|++|||||++  |||+++|++|+++|++|+++.|+ .+..+.+.+... .+...++++|++|+++++++++++.+.+
T Consensus         4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   82 (262)
T PRK07984          4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQN-DKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVW   82 (262)
T ss_pred             cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecc-hhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhc
Confidence            6899999999986  99999999999999998777765 222222222221 1346788999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCC---CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           90 GQLDIMFSNAGILSSSD---QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +++|+||||||+.....   .++.+.+.++|++.+++|+.+++.+++.++|.|.+   +|+||++||..+..+.+.+..|
T Consensus        83 g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~g~Iv~iss~~~~~~~~~~~~Y  159 (262)
T PRK07984         83 PKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNVM  159 (262)
T ss_pred             CCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcC---CcEEEEEecCCCCCCCCCcchh
Confidence            99999999999764321   12567889999999999999999999999986643   4799999999998888999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|+|+++.|++++||+||+|+||+++|++.....  ......+......|. +++.+||||+++++||+++.
T Consensus       160 ~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedva~~~~~L~s~~  236 (262)
T PRK07984        160 GLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK--DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLCSDL  236 (262)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCC--chHHHHHHHHHcCCC-cCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999998754221  112222223334566 78999999999999999998


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+++.+|||+.+
T Consensus       237 ~~~itG~~i~vdgg~~~  253 (262)
T PRK07984        237 SAGISGEVVHVDGGFSI  253 (262)
T ss_pred             cccccCcEEEECCCccc
Confidence            99999999999999764

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=2e-45  Score=304.94  Aligned_cols=246  Identities=20%  Similarity=0.284  Sum_probs=208.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||++|||++++++|+++|++|+++.|+.+...+...+....+++.++++|++|.++++++++++.++++++|+||
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            69999999999999999999999998888887665544333332234678899999999999999999999999999999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      ||+|.......++.+.+.++|.+.+++|+.+++.+++.++|.|.++...|+||++||..+..+.++...|+++|+|+++|
T Consensus        82 ~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~  161 (259)
T PRK08340         82 WNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQL  161 (259)
T ss_pred             ECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHH
Confidence            99998653334677889999999999999999999999999987432268999999999999999999999999999999


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHH-HHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADE-VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+++.|++++||+||+|+||+++|++.....       ....++ ..+.+....|. +|+.+|||||++++||+++..+
T Consensus       162 ~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~fL~s~~~~  240 (259)
T PRK08340        162 AKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPL-KRTGRWEELGSLIAFLLSENAE  240 (259)
T ss_pred             HHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCc-cCCCCHHHHHHHHHHHcCcccc
Confidence            99999999999999999999999999864321       111122 22333445676 8899999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      ++||+++.+|||+.+
T Consensus       241 ~itG~~i~vdgg~~~  255 (259)
T PRK08340        241 YMLGSTIVFDGAMTR  255 (259)
T ss_pred             cccCceEeecCCcCC
Confidence            999999999999864

>PRK08589 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.1e-45  Score=305.19  Aligned_cols=246  Identities=33%  Similarity=0.576  Sum_probs=209.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+ ++..+...+... ..++.++++|++++++++++++++.+.++
T Consensus         3 ~l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (272)
T PRK08589          3 RLENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG   81 (272)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5789999999999999999999999999999888887 544333333322 24688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+.... .++.+.+.+.|++++++|+.+++.+++.++|+|++++  ++||++||..+..+.++...|++||
T Consensus        82 ~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK  158 (272)
T PRK08589         82 RVDVLFNNAGVDNAA-GRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG--GSIINTSSFSGQAADLYRSGYNAAK  158 (272)
T ss_pred             CcCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEeCchhhcCCCCCCchHHHHH
Confidence            999999999986432 3677889999999999999999999999999998754  7999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHH----HhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV----EKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +|+++|++.++.|++++||+||+|+||+++|++.........+..    ........|. +++.+|+|+++.++||+++.
T Consensus       159 aal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~  237 (272)
T PRK08589        159 GAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPL-GRLGKPEEVAKLVVFLASDD  237 (272)
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCC-CCCcCHHHHHHHHHHHcCch
Confidence            999999999999999999999999999999998764432211111    1111223455 78899999999999999988


Q ss_pred             CCCeeccEEEecCeee
Q 041914          247 SEFVTGHDLVVDGGFL  262 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~  262 (264)
                      ..+++|++|.+|||+.
T Consensus       238 ~~~~~G~~i~vdgg~~  253 (272)
T PRK08589        238 SSFITGETIRIDGGVM  253 (272)
T ss_pred             hcCcCCCEEEECCCcc
Confidence            9999999999999975

>PRK08265 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-45  Score=303.08  Aligned_cols=245  Identities=30%  Similarity=0.401  Sum_probs=207.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|++++|+.++..+. .+.. ..++.++++|++|++++.++++++.+.++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   79 (261)
T PRK08265          2 IGLAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAV-AASL-GERARFIATDITDDAAIERAVATVVARFG   79 (261)
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHh-CCeeEEEEecCCCHHHHHHHHHHHHHHhC
Confidence            457899999999999999999999999999988888876544333 3332 23688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||+|.....  . .+.+.++|++.+++|+.+++.+++.++|.|+ ++ .++||++||..+..+.+++..|+++|
T Consensus        80 ~id~lv~~ag~~~~~--~-~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~-~g~ii~isS~~~~~~~~~~~~Y~asK  154 (261)
T PRK08265         80 RVDILVNLACTYLDD--G-LASSRADWLAALDVNLVSAAMLAQAAHPHLA-RG-GGAIVNFTSISAKFAQTGRWLYPASK  154 (261)
T ss_pred             CCCEEEECCCCCCCC--c-CcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh-cC-CcEEEEECchhhccCCCCCchhHHHH
Confidence            999999999986543  2 3578899999999999999999999999997 44 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|++.++.|++++||++|+|+||+++|++....................|. +++.+|+|+|++++||+++...++
T Consensus       155 aa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~~~~l~s~~~~~~  233 (261)
T PRK08265        155 AAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLL-GRVGDPEEVAQVVAFLCSDAASFV  233 (261)
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCC-CCccCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999987543221111111112223466 789999999999999999889999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.|.+|||+++
T Consensus       234 tG~~i~vdgg~~~  246 (261)
T PRK08265        234 TGADYAVDGGYSA  246 (261)
T ss_pred             cCcEEEECCCeec
Confidence            9999999999875

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=1.6e-46  Score=308.38  Aligned_cols=235  Identities=34%  Similarity=0.522  Sum_probs=207.4

Q ss_pred             CCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCccEEEEc
Q 041914           22 GGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLDIMFSN   98 (264)
Q Consensus        22 Gas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~id~lv~~   98 (264)
                      |++  +|||+++|++|+++|++|+++.|+.++..+.+.+........++++|++++++++++++++.+.+ |++|+||||
T Consensus         1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~   80 (241)
T PF13561_consen    1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNN   80 (241)
T ss_dssp             STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEE
T ss_pred             CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEec
Confidence            566  99999999999999999999999888764444444432223369999999999999999999999 999999999


Q ss_pred             CCCCCC--CCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           99 AGILSS--SDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        99 ag~~~~--~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      +|....  ...++.+.+.++|++.+++|+.+++.++|+++|+|++   .|+||++||..+..+.+++..|+++|+|+++|
T Consensus        81 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gsii~iss~~~~~~~~~~~~y~~sKaal~~l  157 (241)
T PF13561_consen   81 AGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKK---GGSIINISSIAAQRPMPGYSAYSASKAALEGL  157 (241)
T ss_dssp             EESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH---EEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHH
T ss_pred             ccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCCcccccchhhcccCccchhhHHHHHHHHHH
Confidence            998765  2358888999999999999999999999999998887   47999999999999999999999999999999


Q ss_pred             HHHHHHHhCc-CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEE
Q 041914          177 VRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL  255 (264)
Q Consensus       177 ~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i  255 (264)
                      +|++|.||++ +|||||+|+||++.|++.....  ..++..+.+....|. +|+.+|||||++++||+++..+++|||+|
T Consensus       158 ~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~--~~~~~~~~~~~~~pl-~r~~~~~evA~~v~fL~s~~a~~itG~~i  234 (241)
T PF13561_consen  158 TRSLAKELAPKKGIRVNAVSPGPIETPMTERIP--GNEEFLEELKKRIPL-GRLGTPEEVANAVLFLASDAASYITGQVI  234 (241)
T ss_dssp             HHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHH--THHHHHHHHHHHSTT-SSHBEHHHHHHHHHHHHSGGGTTGTSEEE
T ss_pred             HHHHHHHhccccCeeeeeecccceeccchhccc--cccchhhhhhhhhcc-CCCcCHHHHHHHHHHHhCccccCccCCeE
Confidence            9999999999 9999999999999999865442  245566677777888 88899999999999999999999999999


Q ss_pred             EecCeee
Q 041914          256 VVDGGFL  262 (264)
Q Consensus       256 ~~dgG~~  262 (264)
                      .+|||++
T Consensus       235 ~vDGG~s  241 (241)
T PF13561_consen  235 PVDGGFS  241 (241)
T ss_dssp             EESTTGG
T ss_pred             EECCCcC
Confidence            9999985

...

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=100.00  E-value=1.3e-44  Score=303.05  Aligned_cols=254  Identities=27%  Similarity=0.359  Sum_probs=214.4

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...+++++|+++||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++|++++..+++++.
T Consensus         3 ~~~~~~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (278)
T PRK08277          3 PNLFSLKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQIL   82 (278)
T ss_pred             CceeccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            345578899999999999999999999999999988888875544333222222 2468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCC-------------CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           87 QNYGQLDIMFSNAGILSSS-------------DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~-------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      ++++++|++|||+|...+.             ..++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||
T Consensus        83 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS  161 (278)
T PRK08277         83 EDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRK-GGNIINISS  161 (278)
T ss_pred             HHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcc
Confidence            9999999999999975432             12577889999999999999999999999999998876 789999999


Q ss_pred             CCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---ChHHHHhhcCCCCCCCCCCC
Q 041914          154 VAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---PADEVEKLFEPQTPLEGVVL  230 (264)
Q Consensus       154 ~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~  230 (264)
                      ..+..+.++...|+++|+|++.|+++++.|++++||+||+|+||+++|++.......   ...+..+.+....|. +|+.
T Consensus       162 ~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~  240 (278)
T PRK08277        162 MNAFTPLTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHTPM-GRFG  240 (278)
T ss_pred             chhcCCCCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccCCc-cCCC
Confidence            999999999999999999999999999999999999999999999999986533211   112222333445666 8899


Q ss_pred             ChHHHHHHHHHHhCC-CCCCeeccEEEecCeeec
Q 041914          231 RAGHVADAVLFLACR-DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       231 ~~edva~~~~~l~s~-~~~~~~G~~i~~dgG~~~  263 (264)
                      +|+|+|++++||+++ ...++||++|.+|||++.
T Consensus       241 ~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG~~~  274 (278)
T PRK08277        241 KPEELLGTLLWLADEKASSFVTGVVLPVDGGFSA  274 (278)
T ss_pred             CHHHHHHHHHHHcCccccCCcCCCEEEECCCeec
Confidence            999999999999998 899999999999999875

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-44  Score=299.52  Aligned_cols=248  Identities=29%  Similarity=0.380  Sum_probs=214.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++.+|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|.++++++++++.++
T Consensus         4 ~~~l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (254)
T PRK08085          4 LFSLAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKD   83 (254)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHh
Confidence            3468899999999999999999999999999988888876554333322222 236788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.++...|++
T Consensus        84 ~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  160 (254)
T PRK08085         84 IGPIDVLINNAGIQRRH--PFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQ-AGKIINICSMQSELGRDTITPYAA  160 (254)
T ss_pred             cCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEccchhccCCCCCcchHH
Confidence            99999999999986544  788899999999999999999999999999998766 689999999999888889999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++++++.++.|++++||++|+|+||+++|++......  .++..+.+....|. +++.+||||++++.||+++.+.
T Consensus       161 sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~--~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~~~~~  237 (254)
T PRK08085        161 SKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVE--DEAFTAWLCKRTPA-ARWGDPQELIGAAVFLSSKASD  237 (254)
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhcc--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999998754321  22333444455676 8899999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      ++||+.+.+|||+..
T Consensus       238 ~i~G~~i~~dgg~~~  252 (254)
T PRK08085        238 FVNGHLLFVDGGMLV  252 (254)
T ss_pred             CCcCCEEEECCCeee
Confidence            999999999999875

>PRK06398 aldose dehydrogenase; Validated

Probab=100.00  E-value=1.3e-44  Score=299.84  Aligned_cols=238  Identities=32%  Similarity=0.471  Sum_probs=206.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+++||++|||||++|||++++++|+++|++|+++.|+..+.          .++.++++|++|+++++++++++.++++
T Consensus         2 ~~l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~   71 (258)
T PRK06398          2 LGLKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYG   71 (258)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            368899999999999999999999999999988888765432          1578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++++++|+.+++.+++.++|+|.+++ .++||++||..+..+.+++..|+++|
T Consensus        72 ~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  148 (258)
T PRK06398         72 RIDILVNNAGIESYG--AIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQD-KGVIINIASVQSFAVTRNAAAYVTSK  148 (258)
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEeCcchhccCCCCCchhhhhH
Confidence            999999999986543  788899999999999999999999999999998766 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC----CChHHH---HhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----MPADEV---EKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      +|+++|++.++.|+++. |+||+|+||+++|++......    ...+..   ...+....|. +++.+|+|++++++||+
T Consensus       149 aal~~~~~~la~e~~~~-i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~eva~~~~~l~  226 (258)
T PRK06398        149 HAVLGLTRSIAVDYAPT-IRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPM-KRVGKPEEVAYVVAFLA  226 (258)
T ss_pred             HHHHHHHHHHHHHhCCC-CEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCc-CCCcCHHHHHHHHHHHc
Confidence            99999999999999875 999999999999998754321    111111   1222334466 78899999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++...+++|+++.+|||+..
T Consensus       227 s~~~~~~~G~~i~~dgg~~~  246 (258)
T PRK06398        227 SDLASFITGECVTVDGGLRA  246 (258)
T ss_pred             CcccCCCCCcEEEECCcccc
Confidence            99899999999999999864

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-44  Score=299.20  Aligned_cols=247  Identities=30%  Similarity=0.478  Sum_probs=212.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++++|++|||||++|||++++++|+++|++|+++.|+ .+. +.+.+...  ..++.++++|+++.++++++++++.+
T Consensus        10 ~~~l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~   87 (258)
T PRK06935         10 FFSLDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNW-DETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALE   87 (258)
T ss_pred             cccCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHH-HHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            446889999999999999999999999999998888887 322 22222221  24688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+.+..|+
T Consensus        88 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  164 (258)
T PRK06935         88 EFGKIDILVNNAGTIRRA--PLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQG-SGKIINIASMLSFQGGKFVPAYT  164 (258)
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcC-CeEEEEECCHHhccCCCCchhhH
Confidence            999999999999986543  777889999999999999999999999999998877 78999999999998889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+++++|+++++.|++++||+||+|+||+++|++......  .+...+......|. +++.+|+|+++.+.||+++..
T Consensus       165 asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~  241 (258)
T PRK06935        165 ASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRA--DKNRNDEILKRIPA-GRWGEPDDLMGAAVFLASRAS  241 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhccc--ChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcChhh
Confidence            999999999999999999999999999999999998654321  11222223334565 789999999999999999999


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      .+++|++|.+|||+++|
T Consensus       242 ~~~~G~~i~~dgg~~~~  258 (258)
T PRK06935        242 DYVNGHILAVDGGWLVR  258 (258)
T ss_pred             cCCCCCEEEECCCeecC
Confidence            99999999999999887

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=100.00  E-value=3.5e-44  Score=295.53  Aligned_cols=247  Identities=29%  Similarity=0.463  Sum_probs=209.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||.+++++|+++|++|+++.|+..+......+.. ..++.++++|+++.+++.++++++.+.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (248)
T TIGR01832         2 SLEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEAL-GRRFLSLTADLSDIEAIKALVDSAVEEFGH   80 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhc-CCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999998888876432211111111 246889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.++|++++++|+.+++.+++.++|.|.+++..++||++||..+..+.+....|+++|+
T Consensus        81 ~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKa  158 (248)
T TIGR01832        81 IDILVNNAGIIRRA--DAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKH  158 (248)
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHH
Confidence            99999999987654  6778899999999999999999999999999976543579999999999888888999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +++++++.++.|++++||+||+|+||+++|++...... . ......+....|. +++.+|||+|+++++|+++...+++
T Consensus       159 a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~~~~  235 (248)
T TIGR01832       159 GVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRA-D-EDRNAAILERIPA-GRWGTPDDIGGPAVFLASSASDYVN  235 (248)
T ss_pred             HHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhcccc-C-hHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccCcC
Confidence            99999999999999999999999999999998654322 1 1222223334565 7899999999999999998899999


Q ss_pred             ccEEEecCeeecC
Q 041914          252 GHDLVVDGGFLIR  264 (264)
Q Consensus       252 G~~i~~dgG~~~~  264 (264)
                      |+++.+|||+.+|
T Consensus       236 G~~i~~dgg~~~~  248 (248)
T TIGR01832       236 GYTLAVDGGWLAR  248 (248)
T ss_pred             CcEEEeCCCEecC
Confidence            9999999999876

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3.2e-44  Score=297.08  Aligned_cols=244  Identities=31%  Similarity=0.499  Sum_probs=208.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++.+|+++||||++|||+++|++|+++|++|+++.++.++..+.+.+.    .+.++++|++|+++++++++++.+.++
T Consensus         3 ~~l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~~   78 (255)
T PRK06463          3 MRFKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK----GVFTIKCDVGNRDQVKKSKEVVEKEFG   78 (255)
T ss_pred             CCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC----CCeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            3578999999999999999999999999999888877765544444322    467899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-CCCCCchhhch
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-GGKRRTDYHMS  169 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~~~~~~~y~~s  169 (264)
                      ++|+||||+|+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+.. +.++...|++|
T Consensus        79 ~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~as  155 (255)
T PRK06463         79 RVDVLVNNAGIMYLM--PFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSK-NGAIVNIASNAGIGTAAEGTTFYAIT  155 (255)
T ss_pred             CCCEEEECCCcCCCC--ChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHhCCCCCCCccHhHHH
Confidence            999999999986543  777889999999999999999999999999998766 78999999998874 45677889999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      |+|+++|+++++.|++++||+||+|+||+++|++....... ..+.....+....|. +++.+|+|+++.+++|+++...
T Consensus       156 Kaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~~  234 (255)
T PRK06463        156 KAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVL-KTTGKPEDIANIVLFLASDDAR  234 (255)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCc-CCCcCHHHHHHHHHHHcChhhc
Confidence            99999999999999999999999999999999987432111 112233334445566 7889999999999999998899


Q ss_pred             CeeccEEEecCeee
Q 041914          249 FVTGHDLVVDGGFL  262 (264)
Q Consensus       249 ~~~G~~i~~dgG~~  262 (264)
                      +++|+.|.+|||..
T Consensus       235 ~~~G~~~~~dgg~~  248 (255)
T PRK06463        235 YITGQVIVADGGRI  248 (255)
T ss_pred             CCCCCEEEECCCee
Confidence            99999999999975

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-44  Score=298.91  Aligned_cols=246  Identities=34%  Similarity=0.493  Sum_probs=206.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+++|++|||||++|||++++++|+++|++|+++.|+.++. +.+.+... .++.++++|++|.++++++++++.+.+++
T Consensus         3 ~~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (263)
T PRK06200          3 WLHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKL-ASLRQRFG-DHVLVVEGDVTSYADNQRAVDQTVDAFGK   80 (263)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHhC-CcceEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            36899999999999999999999999999988888876544 33333322 35788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHH----HHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSA----FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~----~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +|+||||||+.... .++.+.+.++    |++++++|+.+++.+++.++|.|+++  .++||+++|..+..+.++...|+
T Consensus        81 id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~  157 (263)
T PRK06200         81 LDCFVGNAGIWDYN-TSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKAS--GGSMIFTLSNSSFYPGGGGPLYT  157 (263)
T ss_pred             CCEEEECCCCcccC-CCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhc--CCEEEEECChhhcCCCCCCchhH
Confidence            99999999986432 2555666665    89999999999999999999998764  48999999999999988999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-C------CChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-G------MPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      +||+|++.|++.++.|+++ +|+||+|+||+++|++..... .      ...++..+.+....|. +++.+|+|+++.++
T Consensus       158 ~sK~a~~~~~~~la~el~~-~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~eva~~~~  235 (263)
T PRK06200        158 ASKHAVVGLVRQLAYELAP-KIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL-QFAPQPEDHTGPYV  235 (263)
T ss_pred             HHHHHHHHHHHHHHHHHhc-CcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC-CCCCCHHHHhhhhh
Confidence            9999999999999999988 499999999999999864211 0      0112223344555677 89999999999999


Q ss_pred             HHhCCC-CCCeeccEEEecCeeecC
Q 041914          241 FLACRD-SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       241 ~l~s~~-~~~~~G~~i~~dgG~~~~  264 (264)
                      ||+++. ..++||++|.+|||+.+|
T Consensus       236 fl~s~~~~~~itG~~i~vdgG~~~~  260 (263)
T PRK06200        236 LLASRRNSRALTGVVINADGGLGIR  260 (263)
T ss_pred             heecccccCcccceEEEEcCceeec
Confidence            999988 999999999999999875

>PRK06172 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.9e-44  Score=294.34  Aligned_cols=249  Identities=39%  Similarity=0.592  Sum_probs=215.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|+++||||+++||.+++++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.+++.++++++.+.+
T Consensus         3 ~~l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~   82 (253)
T PRK06172          3 MTFSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAY   82 (253)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999998888876654433332222 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .+++|++||..+..+.+++..|+++
T Consensus        83 g~id~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~s  160 (253)
T PRK06172         83 GRLDYAFNNAGIEIEQ-GRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQG-GGAIVNTASVAGLGAAPKMSIYAAS  160 (253)
T ss_pred             CCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhccCCCCCchhHHH
Confidence            9999999999986543 2577889999999999999999999999999998776 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+++++|++.++.|+.++||+|++|+||+++|++...... ..++..+.+....|. ++..+|+|+++.+++|+++...+
T Consensus       161 Kaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~p~~ia~~~~~l~~~~~~~  238 (253)
T PRK06172        161 KHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYE-ADPRKAEFAAAMHPV-GRIGKVEEVASAVLYLCSDGASF  238 (253)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcc-cChHHHHHHhccCCC-CCccCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999999765432 123344445555666 78899999999999999998999


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.|.+|||+++
T Consensus       239 ~~G~~i~~dgg~~~  252 (253)
T PRK06172        239 TTGHALMVDGGATA  252 (253)
T ss_pred             cCCcEEEECCCccC
Confidence            99999999999875

>PRK07791 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.5e-44  Score=300.80  Aligned_cols=241  Identities=28%  Similarity=0.411  Sum_probs=201.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc---------hhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ---------DELGRQVATSIG-VGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~   81 (264)
                      .+++|++|||||++|||++++++|+++|++|+++.++.         +...+...+... ..++.++++|++|.+++.++
T Consensus         3 ~l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~   82 (286)
T PRK07791          3 LLDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL   82 (286)
T ss_pred             ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence            47899999999999999999999999999988877654         333222222222 24678899999999999999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-----CCcEEEEecCCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-----VRGSIVCTASVAG  156 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-----~~~~iv~iss~~~  156 (264)
                      ++++.+.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|+++.     ..|+||++||..+
T Consensus        83 ~~~~~~~~g~id~lv~nAG~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~  160 (286)
T PRK07791         83 VDAAVETFGGLDVLVNNAGILRDR--MIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAG  160 (286)
T ss_pred             HHHHHHhcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhh
Confidence            999999999999999999987544  788899999999999999999999999999997642     1379999999999


Q ss_pred             CCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCC-CCCCChHHH
Q 041914          157 SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE-GVVLRAGHV  235 (264)
Q Consensus       157 ~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~edv  235 (264)
                      ..+.+++..|++||+|+++|+++++.|++++||+||+|+|| +.|++.....    +.    .....+.. .+..+|||+
T Consensus       161 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~~----~~----~~~~~~~~~~~~~~pedv  231 (286)
T PRK07791        161 LQGSVGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETVF----AE----MMAKPEEGEFDAMAPENV  231 (286)
T ss_pred             CcCCCCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhhH----HH----HHhcCcccccCCCCHHHH
Confidence            99999999999999999999999999999999999999999 8888753211    11    11111221 146799999


Q ss_pred             HHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          236 ADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       236 a~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++++||+++...+++|++|.+|||+.+
T Consensus       232 a~~~~~L~s~~~~~itG~~i~vdgG~~~  259 (286)
T PRK07791        232 SPLVVWLGSAESRDVTGKVFEVEGGKIS  259 (286)
T ss_pred             HHHHHHHhCchhcCCCCcEEEEcCCceE
Confidence            9999999999999999999999999864

>PRK12747 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.9e-44  Score=294.98  Aligned_cols=243  Identities=26%  Similarity=0.362  Sum_probs=201.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHh--
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQN--   88 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~--   88 (264)
                      +++|++|||||++|||++++++|+++|++|+++.++..+..+.....+ . ...+..+++|+++.+++..+++++.+.  
T Consensus         2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (252)
T PRK12747          2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   81 (252)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence            468999999999999999999999999997776544333333332222 1 235778999999999999999988753  


Q ss_pred             --cC--CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           89 --YG--QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        89 --~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                        ++  ++|+||||||+....  ++.+.+.++|++++++|+.+++.+++.++|.|++   .++||++||..+..+.++..
T Consensus        82 ~~~g~~~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~  156 (252)
T PRK12747         82 NRTGSTKFDILINNAGIGPGA--FIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFI  156 (252)
T ss_pred             hhcCCCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhc---CCeEEEECCcccccCCCCch
Confidence              34  899999999986433  6788899999999999999999999999999975   47999999999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|++||+++++|+++++.|++++||+||+|+||+++|++......  .+..........|. +++.+|+|+++++.||++
T Consensus       157 ~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  233 (252)
T PRK12747        157 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS--DPMMKQYATTISAF-NRLGEVEDIADTAAFLAS  233 (252)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc--CHHHHHHHHhcCcc-cCCCCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999999998754321  11222222222344 788999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|+.|.+|||+.+
T Consensus       234 ~~~~~~~G~~i~vdgg~~~  252 (252)
T PRK12747        234 PDSRWVTGQLIDVSGGSCL  252 (252)
T ss_pred             ccccCcCCcEEEecCCccC
Confidence            8899999999999999864

>PRK07985 oxidoreductase; Provisional

Probab=100.00  E-value=7.2e-44  Score=300.60  Aligned_cols=245  Identities=28%  Similarity=0.360  Sum_probs=207.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch-hhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD-ELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.++.. +..+.+.+...  ..++.++.+|++|.+++.++++++.+.
T Consensus        46 ~~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  125 (294)
T PRK07985         46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKA  125 (294)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            588999999999999999999999999999887765432 22233333321  236788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||||..... .++.+.+.++|++.+++|+.+++.++++++|+|++   .++||++||..+..+.+....|++
T Consensus       126 ~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~iSS~~~~~~~~~~~~Y~a  201 (294)
T PRK07985        126 LGGLDIMALVAGKQVAI-PDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPK---GASIITTSSIQAYQPSPHLLDYAA  201 (294)
T ss_pred             hCCCCEEEECCCCCcCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhc---CCEEEEECCchhccCCCCcchhHH
Confidence            99999999999975322 36788899999999999999999999999999965   479999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+|+++|++.++.|++++||+||+|+||+++|++.....  ..++....+....|. +++.+|||||++++||++++..
T Consensus       202 sKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~--~~~~~~~~~~~~~~~-~r~~~pedva~~~~fL~s~~~~  278 (294)
T PRK07985        202 TKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG--QTQDKIPQFGQQTPM-KRAGQPAELAPVYVYLASQESS  278 (294)
T ss_pred             HHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccC--CCHHHHHHHhccCCC-CCCCCHHHHHHHHHhhhChhcC
Confidence            9999999999999999999999999999999999853221  122333334455666 7889999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|++|.+|||+.+
T Consensus       279 ~itG~~i~vdgG~~~  293 (294)
T PRK07985        279 YVTAEVHGVCGGEHL  293 (294)
T ss_pred             CccccEEeeCCCeeC
Confidence            999999999999875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-43  Score=293.77  Aligned_cols=247  Identities=30%  Similarity=0.433  Sum_probs=214.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++|++|||||+++||++++++|+++|++|+++.|+.++..+....... ..++.++++|++|.++++++++++.+.++
T Consensus         7 ~~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   86 (255)
T PRK07523          7 DLTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIG   86 (255)
T ss_pred             CCCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            58899999999999999999999999999988888876554333222212 23588999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|.....  ++.+.+.++|++.+++|+.+++++++.+.+.|.+++ .++||++||..+..+.++...|+++|
T Consensus        87 ~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~~sK  163 (255)
T PRK07523         87 PIDILVNNAGMQFRT--PLEDFPADAFERLLRTNISSVFYVGQAVARHMIARG-AGKIINIASVQSALARPGIAPYTATK  163 (255)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEEccchhccCCCCCccHHHHH
Confidence            999999999987654  788899999999999999999999999999998876 78999999999988899999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.+++.++.|++++||+||+|+||+++|++......  .+.....+....|. +++..|+|+|++++||++++..++
T Consensus       164 ~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  240 (255)
T PRK07523        164 GAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVA--DPEFSAWLEKRTPA-GRWGKVEELVGACVFLASDASSFV  240 (255)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhcc--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCc
Confidence            999999999999999999999999999999998754321  12333444455666 789999999999999999989999


Q ss_pred             eccEEEecCeeecC
Q 041914          251 TGHDLVVDGGFLIR  264 (264)
Q Consensus       251 ~G~~i~~dgG~~~~  264 (264)
                      +|+.|.+|||+.++
T Consensus       241 ~G~~i~~~gg~~~~  254 (255)
T PRK07523        241 NGHVLYVDGGITAS  254 (255)
T ss_pred             cCcEEEECCCeecc
Confidence            99999999998764

>PLN02253 xanthoxin dehydrogenase

Probab=100.00  E-value=1.5e-43  Score=297.03  Aligned_cols=252  Identities=42%  Similarity=0.689  Sum_probs=209.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++++|++|||||++|||++++++|+++|++|+++.++.+... .+.+.+. ..++.++++|++|.++++++++++.+.
T Consensus        13 ~~~l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~   91 (280)
T PLN02253         13 SQRLLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQ-NVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDK   91 (280)
T ss_pred             ccccCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHH
Confidence            34578999999999999999999999999999888887655433 3333332 236889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||.......++.+.+.++|++++++|+.++++++++++|.|.+++ .|+|++++|..+..+.++...|++
T Consensus        92 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~Y~~  170 (280)
T PLN02253         92 FGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLK-KGSIVSLCSVASAIGGLGPHAYTG  170 (280)
T ss_pred             hCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CceEEEecChhhcccCCCCcccHH
Confidence            9999999999998654333678899999999999999999999999999998766 689999999999888888889999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHH----HhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEV----EKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      +|++++.|++.++.|++++||+||+++||+++|++........  ....    ........+..++..+|+|++++++||
T Consensus       171 sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~dva~~~~~l  250 (280)
T PLN02253        171 SKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKGVELTVDDVANAVLFL  250 (280)
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcCCCCCHHHHHHHHHhh
Confidence            9999999999999999999999999999999999754321111  0111    111122233335668999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++...+++|+.|.+|||+.+
T Consensus       251 ~s~~~~~i~G~~i~vdgG~~~  271 (280)
T PLN02253        251 ASDEARYISGLNLMIDGGFTC  271 (280)
T ss_pred             cCcccccccCcEEEECCchhh
Confidence            999999999999999999763

>PRK06841 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-43  Score=293.27  Aligned_cols=254  Identities=33%  Similarity=0.529  Sum_probs=215.9

Q ss_pred             CCCcccccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHH
Q 041914            1 MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKA   80 (264)
Q Consensus         1 ~~~~~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~   80 (264)
                      |........++++.+|++|||||+++||.+++++|+++|++|+++.|+... .+. .......++.++++|+++++++++
T Consensus         1 ~~~~~~~~~~~~~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~-~~~-~~~~~~~~~~~~~~Dl~~~~~~~~   78 (255)
T PRK06841          1 MTDTKQFDLAFDLSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDV-AEV-AAQLLGGNAKGLVCDVSDSQSVEA   78 (255)
T ss_pred             CCCcccchhhcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH-HHH-HHHhhCCceEEEEecCCCHHHHHH
Confidence            333334445577899999999999999999999999999998888876543 222 222333467789999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 041914           81 LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG  160 (264)
Q Consensus        81 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~  160 (264)
                      +++++.+.++++|++|||+|.....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.
T Consensus        79 ~~~~~~~~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~  155 (255)
T PRK06841         79 AVAAVISAFGRIDILVNSAGVALLA--PAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAG-GGKIVNLASQAGVVAL  155 (255)
T ss_pred             HHHHHHHHhCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcC-CceEEEEcchhhccCC
Confidence            9999999999999999999987544  677889999999999999999999999999998876 7899999999999999


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      +....|+++|++++.+++.++.|++++||++|+|+||+++|++......   ....+.+....|. +++.+|+|+++.++
T Consensus       156 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~va~~~~  231 (255)
T PRK06841        156 ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWA---GEKGERAKKLIPA-GRFAYPEEIAAAAL  231 (255)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccc---hhHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            9999999999999999999999999999999999999999998654321   1112223344565 78999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeec
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +|+++...+++|++|.+|||+.+
T Consensus       232 ~l~~~~~~~~~G~~i~~dgg~~~  254 (255)
T PRK06841        232 FLASDAAAMITGENLVIDGGYTI  254 (255)
T ss_pred             HHcCccccCccCCEEEECCCccC
Confidence            99999999999999999999876

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=1.8e-44  Score=302.93  Aligned_cols=249  Identities=21%  Similarity=0.252  Sum_probs=195.0

Q ss_pred             ccccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCc--------hhhHHHHHh--hhCCC-----cEEEEEec
Q 041914            9 AKNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQ--------DELGRQVAT--SIGVG-----KCHYVHCD   71 (264)
Q Consensus         9 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~--------~~~~~~~~~--~~~~~-----~~~~~~~D   71 (264)
                      ++.+++||++||||++  +|||+++|+.|+++|++|++..+.+        ....+....  .....     ++..+..|
T Consensus         2 ~~~~~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d   81 (299)
T PRK06300          2 LKIDLTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDAS   81 (299)
T ss_pred             CCcCCCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhh
Confidence            4677899999999995  9999999999999999987755331        000000000  00000     01112233


Q ss_pred             CCCH------------------HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHH
Q 041914           72 VTNE------------------CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK  133 (264)
Q Consensus        72 ~s~~------------------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  133 (264)
                      +++.                  ++++++++++.+++|++|+||||||.......++.+.+.++|++++++|+.+++++++
T Consensus        82 ~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~  161 (299)
T PRK06300         82 FDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLS  161 (299)
T ss_pred             cCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHH
Confidence            3332                  4689999999999999999999999754323478899999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEecCCCCCCCCCCCc-hhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCC
Q 041914          134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRT-DYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMP  211 (264)
Q Consensus       134 ~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~-~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~  211 (264)
                      +++|+|++   .|+||+++|..+..+.+++. .|++||+|+++|+++++.|+++ +|||||+|+||++.|++.....  .
T Consensus       162 a~~p~m~~---~G~ii~iss~~~~~~~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~--~  236 (299)
T PRK06300        162 HFGPIMNP---GGSTISLTYLASMRAVPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG--F  236 (299)
T ss_pred             HHHHHhhc---CCeEEEEeehhhcCcCCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc--c
Confidence            99999975   46899999999988888765 8999999999999999999987 5999999999999999864321  1


Q ss_pred             hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          212 ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .+...+......|. ++..+|||+++.++||+++...++||+++.+|||+.+
T Consensus       237 ~~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  287 (299)
T PRK06300        237 IERMVDYYQDWAPL-PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHGANV  287 (299)
T ss_pred             cHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCCcce
Confidence            12222333344566 7889999999999999999999999999999999875

>PRK06128 oxidoreductase; Provisional

Probab=100.00  E-value=1.8e-43  Score=299.18  Aligned_cols=247  Identities=30%  Similarity=0.407  Sum_probs=209.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.+..+. ..+...+.+.  ..++.++++|++|.++++++++++.+
T Consensus        51 ~~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~  130 (300)
T PRK06128         51 GRLQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVK  130 (300)
T ss_pred             cccCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHH
Confidence            35889999999999999999999999999998777665432 2222222221  23678899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||..... .++.+.+.++|++.+++|+.+++++++.++|+|++   .++||++||..+..+.+++..|+
T Consensus       131 ~~g~iD~lV~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~  206 (300)
T PRK06128        131 ELGGLDILVNIAGKQTAV-KDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPP---GASIINTGSIQSYQPSPTLLDYA  206 (300)
T ss_pred             HhCCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCc---CCEEEEECCccccCCCCCchhHH
Confidence            999999999999986432 36888999999999999999999999999999965   46999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||++++.|++.++.++.++||+||+|+||+++|++.... .. .++....+....|. +++..|+|++.+++||+++..
T Consensus       207 asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~-~~-~~~~~~~~~~~~p~-~r~~~p~dva~~~~~l~s~~~  283 (300)
T PRK06128        207 STKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSG-GQ-PPEKIPDFGSETPM-KRPGQPVEMAPLYVLLASQES  283 (300)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccC-CC-CHHHHHHHhcCCCC-CCCcCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999986432 11 23333444455676 789999999999999999889


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      .+++|+.|.+|||+.++
T Consensus       284 ~~~~G~~~~v~gg~~~~  300 (300)
T PRK06128        284 SYVTGEVFGVTGGLLLS  300 (300)
T ss_pred             cCccCcEEeeCCCEeCc
Confidence            99999999999999764

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-43  Score=291.83  Aligned_cols=249  Identities=28%  Similarity=0.472  Sum_probs=214.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++++|++|||||++|||+++|++|+++|++|+++.|+..+..+...+.+.  ..++.++++|++|.+++.++++++.+
T Consensus         2 ~~~~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~   81 (261)
T PRK08936          2 YSDLEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVK   81 (261)
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            3458899999999999999999999999999988888866554444443332  24678899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|+|.+++..++||++||..+..+.+++..|+
T Consensus        82 ~~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~  159 (261)
T PRK08936         82 EFGTLDVMINNAGIENAV--PSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYA  159 (261)
T ss_pred             HcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccH
Confidence            999999999999987654  677889999999999999999999999999998765368999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+|++.|++.++.++.++||+||+|+||+++|++......  .++....+....|. +++.+|+|+++.+.||+++..
T Consensus       160 ~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~s~~~  236 (261)
T PRK08936        160 ASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFA--DPKQRADVESMIPM-GYIGKPEEIAAVAAWLASSEA  236 (261)
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccC--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999998653321  12222333345566 789999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      .+++|++|.+|||+.+
T Consensus       237 ~~~~G~~i~~d~g~~~  252 (261)
T PRK08936        237 SYVTGITLFADGGMTL  252 (261)
T ss_pred             CCccCcEEEECCCccc
Confidence            9999999999999864

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=100.00  E-value=9.3e-44  Score=287.85  Aligned_cols=223  Identities=25%  Similarity=0.340  Sum_probs=197.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ...++++||||||+|||+++|++|+++|++|++++|+.+++.+..++....  .++.++++|+++++++.++.+++.++.
T Consensus         3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~   82 (265)
T COG0300           3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG   82 (265)
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence            356899999999999999999999999999999999988876555544432  478999999999999999999999998


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      ..||+||||||.....  ++.+.++++.++++++|+.++..+++.++|.|.+++ .|.||+++|..+..|.|..+.|++|
T Consensus        83 ~~IdvLVNNAG~g~~g--~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~-~G~IiNI~S~ag~~p~p~~avY~AT  159 (265)
T COG0300          83 GPIDVLVNNAGFGTFG--PFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERG-AGHIINIGSAAGLIPTPYMAVYSAT  159 (265)
T ss_pred             CcccEEEECCCcCCcc--chhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCcchHHHHHH
Confidence            8999999999998876  899999999999999999999999999999999988 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |+++.+|+++|+.|++++||+|.+++||++.|+++... +..       .....+ ...+++||++|+..+..+...
T Consensus       160 Ka~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~~-~~~-------~~~~~~-~~~~~~~~~va~~~~~~l~~~  227 (265)
T COG0300         160 KAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDAK-GSD-------VYLLSP-GELVLSPEDVAEAALKALEKG  227 (265)
T ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccccc-ccc-------cccccc-hhhccCHHHHHHHHHHHHhcC
Confidence            99999999999999999999999999999999988511 000       011112 256789999999999988654

>PRK07035 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.8e-43  Score=290.10  Aligned_cols=247  Identities=33%  Similarity=0.479  Sum_probs=212.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|+++.++++++++++.+.+
T Consensus         4 ~~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   83 (252)
T PRK07035          4 FDLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERH   83 (252)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            468899999999999999999999999999998888876554333333222 2357889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|.... ..++.+.+.++|++.+++|+.+++.++++++|+|++++ .++|+++||..+..+.+++..|++|
T Consensus        84 ~~id~li~~ag~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  161 (252)
T PRK07035         84 GRLDILVNNAAANPY-FGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQG-GGSIVNVASVNGVSPGDFQGIYSIT  161 (252)
T ss_pred             CCCCEEEECCCcCCC-CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CcEEEEECchhhcCCCCCCcchHHH
Confidence            999999999997532 23677889999999999999999999999999998776 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+++++|+++++.|+.++||+|++|+||+++|++......  .+...+......|. +++.+|||+|+.++||+++...+
T Consensus       162 K~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  238 (252)
T PRK07035        162 KAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFK--NDAILKQALAHIPL-RRHAEPSEMAGAVLYLASDASSY  238 (252)
T ss_pred             HHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccC--CHHHHHHHHccCCC-CCcCCHHHHHHHHHHHhCccccC
Confidence            9999999999999999999999999999999998755432  12333333444565 78899999999999999999999


Q ss_pred             eeccEEEecCeee
Q 041914          250 VTGHDLVVDGGFL  262 (264)
Q Consensus       250 ~~G~~i~~dgG~~  262 (264)
                      ++|+++.+|||++
T Consensus       239 ~~g~~~~~dgg~~  251 (252)
T PRK07035        239 TTGECLNVDGGYL  251 (252)
T ss_pred             ccCCEEEeCCCcC
Confidence            9999999999974

>PRK08643 acetoin reductase; Validated

Probab=100.00  E-value=3.9e-43  Score=290.66  Aligned_cols=247  Identities=29%  Similarity=0.464  Sum_probs=209.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++++++++++++++.++++++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            68999999999999999999999999988888876554333332222 24678899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|+....  ++.+.+.++|++.+++|+.+++.+++.+++.|++.+..++||++||..+..+.++...|+++|+++
T Consensus        82 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  159 (256)
T PRK08643         82 VVVNNAGVAPTT--PIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAV  159 (256)
T ss_pred             EEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHH
Confidence            999999986544  788889999999999999999999999999998754357999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +.|++.++.|++++||+||+|+||+++|++......       .+.......+....|. +++.+|||+++.++||+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~L~~~~  238 (256)
T PRK08643        160 RGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITL-GRLSEPEDVANCVSFLAGPD  238 (256)
T ss_pred             HHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999998754211       1111112223344555 78899999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..++||++|.+|||+.+.
T Consensus       239 ~~~~~G~~i~vdgg~~~~  256 (256)
T PRK08643        239 SDYITGQTIIVDGGMVFH  256 (256)
T ss_pred             ccCccCcEEEeCCCeecC
Confidence            999999999999999864

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=100.00  E-value=4.7e-43  Score=290.38  Aligned_cols=249  Identities=35%  Similarity=0.543  Sum_probs=213.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +.+.+|++|||||+++||++++++|+++|++|+++.|+.+...+. .+... .++.++++|++|+++++++++++.+.++
T Consensus         2 ~~l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (257)
T PRK07067          2 MRLQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLA-ALEIG-PAAIAVSLDVTRQDSIDRIVAAAVERFG   79 (257)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            358899999999999999999999999999988888876654333 33322 3578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.+++.|.+++..++||++||..+..+.++...|++||
T Consensus        80 ~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK  157 (257)
T PRK07067         80 GIDILFNNAALFDMA--PILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATK  157 (257)
T ss_pred             CCCEEEECCCcCCCC--CcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhH
Confidence            999999999987543  778889999999999999999999999999998754357999999999888889999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ++++.|++.++.|+.++||++|+|.||+++|++.....       .....+....+....|. +++.+|+|+|++++||+
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  236 (257)
T PRK07067        158 AAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPL-GRMGVPDDLTGMALFLA  236 (257)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCC-CCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999864321       11122223334445666 88999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeecC
Q 041914          244 CRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++...+++|++|.+|||..++
T Consensus       237 s~~~~~~~g~~~~v~gg~~~~  257 (257)
T PRK07067        237 SADADYIVAQTYNVDGGNWMS  257 (257)
T ss_pred             CcccccccCcEEeecCCEeCC
Confidence            998999999999999998875

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.7e-43  Score=290.27  Aligned_cols=240  Identities=24%  Similarity=0.335  Sum_probs=205.3

Q ss_pred             ccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCc----------hhhHHHHHhhhC--CCcEEEEEecCCCHH
Q 041914           11 NKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQ----------DELGRQVATSIG--VGKCHYVHCDVTNEC   76 (264)
Q Consensus        11 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~D~s~~~   76 (264)
                      .+|+||++|||||+  +|||+++|++|+++|++|+++.+..          .+....+.+...  ..++.++++|++|.+
T Consensus         2 ~~l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~   81 (256)
T PRK12859          2 NQLKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQND   81 (256)
T ss_pred             CCcCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence            46899999999999  5999999999999999987765321          111122222222  246889999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ++.++++++.+.++++|++|||||.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .|+||++||..+
T Consensus        82 ~i~~~~~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~  158 (256)
T PRK12859         82 APKELLNKVTEQLGYPHILVNNAAYSTNN--DFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKS-GGRIINMTSGQF  158 (256)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEEccccc
Confidence            99999999999999999999999986544  788999999999999999999999999999998766 789999999999


Q ss_pred             CCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          157 SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       157 ~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                      ..+.+++..|+++|+++++|+++++.+++++||+||+|+||+++|++..       +...+.+....|. +++.+|+|++
T Consensus       159 ~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~-------~~~~~~~~~~~~~-~~~~~~~d~a  230 (256)
T PRK12859        159 QGPMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT-------EEIKQGLLPMFPF-GRIGEPKDAA  230 (256)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC-------HHHHHHHHhcCCC-CCCcCHHHHH
Confidence            9999999999999999999999999999999999999999999998642       1222333344555 7788999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +.+.+|+++...+++|++|.+|||+
T Consensus       231 ~~~~~l~s~~~~~~~G~~i~~dgg~  255 (256)
T PRK12859        231 RLIKFLASEEAEWITGQIIHSEGGF  255 (256)
T ss_pred             HHHHHHhCccccCccCcEEEeCCCc
Confidence            9999999998999999999999996

>PRK06125 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.3e-43  Score=290.43  Aligned_cols=246  Identities=26%  Similarity=0.307  Sum_probs=206.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++++|++||||+++|||++++++|+++|++|++++|+.++..+...+...  ..++.++++|++|++++.+++++    
T Consensus         3 ~~~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~----   78 (259)
T PRK06125          3 LHLAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAE----   78 (259)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHH----
Confidence            457899999999999999999999999999988888876654333222221  24678899999999999888764    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.++|++++++|+.+++++++.++|.|.+++ .++||+++|..+..+.+.+..|++
T Consensus        79 ~g~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~y~a  155 (259)
T PRK06125         79 AGDIDILVNNAGAIPGG--GLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARG-SGVIVNVIGAAGENPDADYICGSA  155 (259)
T ss_pred             hCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEecCccccCCCCCchHhHH
Confidence            47899999999987543  788999999999999999999999999999998876 689999999999988888899999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC------CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG------MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      +|+|+++|+++++.|+.++||+||+|+||+++|++......      ...++....+....|. +++.+|+|++++++||
T Consensus       156 sk~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l  234 (259)
T PRK06125        156 GNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPL-GRPATPEEVADLVAFL  234 (259)
T ss_pred             HHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCc-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999997543210      0112222333445566 7889999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++...++||+.|.+|||+..|
T Consensus       235 ~~~~~~~~~G~~i~vdgg~~~~  256 (259)
T PRK06125        235 ASPRSGYTSGTVVTVDGGISAR  256 (259)
T ss_pred             cCchhccccCceEEecCCeeec
Confidence            9988999999999999998764

>PRK08303 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-43  Score=298.40  Aligned_cols=246  Identities=21%  Similarity=0.250  Sum_probs=196.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch---------hhHHHHHhhhC--CCcEEEEEecCCCHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD---------ELGRQVATSIG--VGKCHYVHCDVTNECQ   77 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~D~s~~~~   77 (264)
                      +|.++++|++|||||++|||+++|++|++.|++|++++|+..         +..+.+.+.+.  ..++.++++|++|+++
T Consensus         2 ~~~~l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~   81 (305)
T PRK08303          2 MMKPLRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQ   81 (305)
T ss_pred             CCcCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            566789999999999999999999999999999888888642         12222223222  2357889999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcC-CCCC--CCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           78 VKALVDSTVQNYGQLDIMFSNA-GILS--SSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~a-g~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      ++++++++.++++++|+||||+ |...  ....++.+.+.++|++++++|+.+++.+++.++|+|.+++ .|+||++||.
T Consensus        82 v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~-~g~IV~isS~  160 (305)
T PRK08303         82 VRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRP-GGLVVEITDG  160 (305)
T ss_pred             HHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCC-CcEEEEECCc
Confidence            9999999999999999999999 7531  1123678889999999999999999999999999998765 6899999997


Q ss_pred             CCCC---CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCC
Q 041914          155 AGSC---GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR  231 (264)
Q Consensus       155 ~~~~---~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (264)
                      .+..   +.++...|++||+|+.+|+++++.|+++.||+||+|+||+++|+|.........+...+.. ...|..++..+
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~p~~~~~~~  239 (305)
T PRK08303        161 TAEYNATHYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDAL-AKEPHFAISET  239 (305)
T ss_pred             cccccCcCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhh-ccccccccCCC
Confidence            6543   3345678999999999999999999999999999999999999986432111111111111 23453366779


Q ss_pred             hHHHHHHHHHHhCCCC-CCeeccEEE
Q 041914          232 AGHVADAVLFLACRDS-EFVTGHDLV  256 (264)
Q Consensus       232 ~edva~~~~~l~s~~~-~~~~G~~i~  256 (264)
                      |||++++++||+++.. .++||++|.
T Consensus       240 peevA~~v~fL~s~~~~~~itG~~l~  265 (305)
T PRK08303        240 PRYVGRAVAALAADPDVARWNGQSLS  265 (305)
T ss_pred             HHHHHHHHHHHHcCcchhhcCCcEEE
Confidence            9999999999999774 589999875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=8.9e-43  Score=290.03  Aligned_cols=252  Identities=28%  Similarity=0.417  Sum_probs=214.8

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...+++.+|++||||++++||++++++|+++|++|+++.|+.++..+....... ..++.++++|++|.++++++++++.
T Consensus         3 ~~~~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   82 (265)
T PRK07097          3 ENLFSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIE   82 (265)
T ss_pred             ccccCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999988887776555333322222 2368899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||+|+....  ++.+.+.++|++++++|+.+++.+++.++|+|++++ .++||++||..+..+.+++..|
T Consensus        83 ~~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  159 (265)
T PRK07097         83 KEVGVIDILVNNAGIIKRI--PMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAY  159 (265)
T ss_pred             HhCCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCccccCCCCCCccH
Confidence            9999999999999987654  788899999999999999999999999999998876 7899999999998888999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC----ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      +++|++++.|+++++.+++++||+||+|+||+++|++.......    ......+......|. +++.+|+|+++.+++|
T Consensus       160 ~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l  238 (265)
T PRK07097        160 AAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPA-ARWGDPEDLAGPAVFL  238 (265)
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCc-cCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999987543210    111222333344555 7889999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++...+++|+.+.+|||++.
T Consensus       239 ~~~~~~~~~g~~~~~~gg~~~  259 (265)
T PRK07097        239 ASDASNFVNGHILYVDGGILA  259 (265)
T ss_pred             hCcccCCCCCCEEEECCCcee
Confidence            998889999999999999763

>PRK08226 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-42  Score=289.00  Aligned_cols=248  Identities=31%  Similarity=0.482  Sum_probs=209.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++.+|+++||||++|||++++++|+++|++|++++|+.. ..+...+... ..++.++++|++++++++++++++.+++
T Consensus         2 ~~~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   80 (263)
T PRK08226          2 GKLTGKTALITGALQGIGEGIARVFARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE   80 (263)
T ss_pred             CCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence            3578999999999999999999999999999888887653 2222222222 2467889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC-CCCCCCCchhhc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG-SCGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~-~~~~~~~~~y~~  168 (264)
                      +++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|+|.+++ .++||++||..+ ..+.+.+..|++
T Consensus        81 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~Y~~  157 (263)
T PRK08226         81 GRIDILVNNAGVCRLG--SFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARK-DGRIVMMSSVTGDMVADPGETAYAL  157 (263)
T ss_pred             CCCCEEEECCCcCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhcccCCCCcchHHH
Confidence            9999999999987544  778889999999999999999999999999998765 689999999887 456678899999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC----CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +|++++++++.++.+++++||+||+|+||+++|++......    ...+.....+....|. +++.+|+|+++.++||++
T Consensus       158 sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~~~~l~~  236 (263)
T PRK08226        158 TKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL-RRLADPLEVGELAAFLAS  236 (263)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999998754321    1122333344445566 788999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|++|.+|||+++
T Consensus       237 ~~~~~~~g~~i~~dgg~~~  255 (263)
T PRK08226        237 DESSYLTGTQNVIDGGSTL  255 (263)
T ss_pred             chhcCCcCceEeECCCccc
Confidence            8899999999999999875

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=100.00  E-value=2.6e-43  Score=292.75  Aligned_cols=246  Identities=33%  Similarity=0.494  Sum_probs=201.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|+++||||++|||++++++|+++|++|+++.|+.+.. +.+.+.. ..++.++++|++|.+++.++++++.+.+++
T Consensus         2 ~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~-~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (262)
T TIGR03325         2 RLKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGL-QELEAAH-GDAVVGVEGDVRSLDDHKEAVARCVAAFGK   79 (262)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHhhc-CCceEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999988888766543 3333221 236788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCH----HHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDF----SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~----~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +|+||||||+.... .++.+.+.    ++|++.+++|+.+++.++++++|.|.++  .+++|+++|..+..+.++...|+
T Consensus        80 id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~~sS~~~~~~~~~~~~Y~  156 (262)
T TIGR03325        80 IDCLIPNAGIWDYS-TALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS--RGSVIFTISNAGFYPNGGGPLYT  156 (262)
T ss_pred             CCEEEECCCCCccC-CccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc--CCCEEEEeccceecCCCCCchhH
Confidence            99999999975322 13433433    5799999999999999999999999764  37899999999998888889999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-CCCh-----HHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-GMPA-----DEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      ++|+|+++|++.++.|++++ |+||+|+||+++|+|..... ....     ....+.+....|. +|+.+|+|++++++|
T Consensus       157 ~sKaa~~~l~~~la~e~~~~-irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~eva~~~~~  234 (262)
T TIGR03325       157 AAKHAVVGLVKELAFELAPY-VRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPI-GRMPDAEEYTGAYVF  234 (262)
T ss_pred             HHHHHHHHHHHHHHHhhccC-eEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCC-CCCCChHHhhhheee
Confidence            99999999999999999986 99999999999999864321 0000     0112223344566 899999999999999


Q ss_pred             HhCCC-CCCeeccEEEecCeeecC
Q 041914          242 LACRD-SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~-~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++. ..++||++|.+|||+.++
T Consensus       235 l~s~~~~~~~tG~~i~vdgg~~~~  258 (262)
T TIGR03325       235 FATRGDTVPATGAVLNYDGGMGVR  258 (262)
T ss_pred             eecCCCcccccceEEEecCCeeec
Confidence            99874 678999999999998764

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK07856 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=287.05  Aligned_cols=239  Identities=30%  Similarity=0.395  Sum_probs=207.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++       ......+.++++|++++++++++++++.+.++
T Consensus         2 ~~~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~-------~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   74 (252)
T PRK07856          2 LDLTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE-------TVDGRPAEFHAADVRDPDQVAALVDAIVERHG   74 (252)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh-------hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46889999999999999999999999999998888887543       11223678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|+....  ++.+.+.++|++.+++|+.+++.+++.+.|.|.++...++||++||..+..+.+++..|+++|
T Consensus        75 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK  152 (252)
T PRK07856         75 RLDVLVNNAGGSPYA--LAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAK  152 (252)
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHH
Confidence            999999999986543  677889999999999999999999999999998753258999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +++++|++.++.|++++ |++|+|+||+++|++......  .++....+....|. +++.+|||+++.++||+++...++
T Consensus       153 ~a~~~l~~~la~e~~~~-i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~p~~va~~~~~L~~~~~~~i  228 (252)
T PRK07856        153 AGLLNLTRSLAVEWAPK-VRVNAVVVGLVRTEQSELHYG--DAEGIAAVAATVPL-GRLATPADIAWACLFLASDLASYV  228 (252)
T ss_pred             HHHHHHHHHHHHHhcCC-eEEEEEEeccccChHHhhhcc--CHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999987 999999999999998654321  12222334445566 788999999999999999889999


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                      +|+.|.+|||..
T Consensus       229 ~G~~i~vdgg~~  240 (252)
T PRK07856        229 SGANLEVHGGGE  240 (252)
T ss_pred             cCCEEEECCCcc
Confidence            999999999974

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2.1e-42  Score=285.61  Aligned_cols=246  Identities=31%  Similarity=0.450  Sum_probs=208.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+++|++|||||++|||+++++.|+++|++|+++.++..+..+.+..... .++.++++|++|++++.++++++.+.+++
T Consensus         2 ~l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   80 (253)
T PRK08642          2 QISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELG-DRAIALQADVTDREQVQAMFATATEHFGK   80 (253)
T ss_pred             CCCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhC-CceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            46789999999999999999999999999988777665544444443333 46888999999999999999999998887


Q ss_pred             -ccEEEEcCCCCCC----CCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           92 -LDIMFSNAGILSS----SDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        92 -id~lv~~ag~~~~----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                       +|++|||+|....    ...++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||+++|..+..+.+++..|
T Consensus        81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~Y  159 (253)
T PRK08642         81 PITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQG-FGRIINIGTNLFQNPVVPYHDY  159 (253)
T ss_pred             CCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCccch
Confidence             9999999986421    123677889999999999999999999999999998766 6899999998887777788899


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++|++++.|++.++.+++++||+||+|+||+++|++....   ..++....+....|. +++.+|+|+++++.||+++.
T Consensus       160 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~  235 (253)
T PRK08642        160 TTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAA---TPDEVFDLIAATTPL-RKVTTPQEFADAVLFFASPW  235 (253)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhcc---CCHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHcCch
Confidence            99999999999999999999999999999999999865422   223333444455666 78999999999999999988


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+.|.+|||+.+
T Consensus       236 ~~~~~G~~~~vdgg~~~  252 (253)
T PRK08642        236 ARAVTGQNLVVDGGLVM  252 (253)
T ss_pred             hcCccCCEEEeCCCeec
Confidence            99999999999999865

>PRK07831 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-42  Score=286.98  Aligned_cols=244  Identities=30%  Similarity=0.493  Sum_probs=208.4

Q ss_pred             cCCCcEEEEeCCCC-hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh---hCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGAS-GIGETTARLFADHGARMIVIADIQDELGRQVATS---IGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGas~-giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++|++|||||++ |||+++++.|+++|++|+++.|+.++..+...+.   ....++.++++|++++++++++++++.+
T Consensus        14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   93 (262)
T PRK07831         14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE   93 (262)
T ss_pred             ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            46789999999985 9999999999999999888777665443332222   1223688899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+....++|++++|..+..+.+++..|+
T Consensus        94 ~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~  171 (262)
T PRK07831         94 RLGRLDVLVNNAGLGGQT--PVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYA  171 (262)
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchH
Confidence            999999999999986543  788899999999999999999999999999998754358999999999998889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+|+++|++.++.|++++||+||+|+||+++|++.....   .++..+.+....|. ++..+|+|++++++||+++..
T Consensus       172 ~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~---~~~~~~~~~~~~~~-~r~~~p~~va~~~~~l~s~~~  247 (262)
T PRK07831        172 AAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVT---SAELLDELAAREAF-GRAAEPWEVANVIAFLASDYS  247 (262)
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCccccccc---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchh
Confidence            99999999999999999999999999999999999865431   22333333344565 789999999999999999999


Q ss_pred             CCeeccEEEecCee
Q 041914          248 EFVTGHDLVVDGGF  261 (264)
Q Consensus       248 ~~~~G~~i~~dgG~  261 (264)
                      .++||++|.+|+|+
T Consensus       248 ~~itG~~i~v~~~~  261 (262)
T PRK07831        248 SYLTGEVVSVSSQH  261 (262)
T ss_pred             cCcCCceEEeCCCC
Confidence            99999999999986

>PRK12743 oxidoreductase; Provisional

Probab=100.00  E-value=3e-42  Score=285.43  Aligned_cols=243  Identities=30%  Similarity=0.505  Sum_probs=209.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||++|||++++++|+++|++|+++.+++.+..+.+.+...  ..++.++++|+++.++++++++++.+.++++
T Consensus         2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12743          2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRI   81 (256)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999988887766554444433332  2468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||+|.....  ++.+.+.++|++.+++|+.+++.++++++++|.+++..++||++||..+..+.++...|+++|++
T Consensus        82 d~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a  159 (256)
T PRK12743         82 DVLVNNAGAMTKA--PFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHA  159 (256)
T ss_pred             CEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHH
Confidence            9999999987543  67788999999999999999999999999999775435899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      ++.+++.++.+++++||++|+|+||+++|++....    .++.........|. ++..+|+|+++++.||+++...+++|
T Consensus       160 ~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~----~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~G  234 (256)
T PRK12743        160 LGGLTKAMALELVEHGILVNAVAPGAIATPMNGMD----DSDVKPDSRPGIPL-GRPGDTHEIASLVAWLCSEGASYTTG  234 (256)
T ss_pred             HHHHHHHHHHHhhhhCeEEEEEEeCCccCcccccc----ChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccccCcCC
Confidence            99999999999999999999999999999986432    12222223344555 67889999999999999988999999


Q ss_pred             cEEEecCeeecC
Q 041914          253 HDLVVDGGFLIR  264 (264)
Q Consensus       253 ~~i~~dgG~~~~  264 (264)
                      +++.+|||++++
T Consensus       235 ~~~~~dgg~~~~  246 (256)
T PRK12743        235 QSLIVDGGFMLA  246 (256)
T ss_pred             cEEEECCCcccc
Confidence            999999998753

>PRK09242 tropinone reductase; Provisional

Probab=100.00  E-value=3.1e-42  Score=285.52  Aligned_cols=247  Identities=28%  Similarity=0.423  Sum_probs=213.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ++++++|+++||||++|||++++++|+++|++|+++.|+.++..+...+..   ...++.++++|+++++++.++++++.
T Consensus         4 ~~~~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   83 (257)
T PRK09242          4 RWRLDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVE   83 (257)
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            456889999999999999999999999999998888887665433332221   13478899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||+|.....  ++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.++...|
T Consensus        84 ~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y  160 (257)
T PRK09242         84 DHWDGLHILVNNAGGNIRK--AAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHA-SSAIVNIGSVSGLTHVRSGAPY  160 (257)
T ss_pred             HHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CceEEEECccccCCCCCCCcch
Confidence            9999999999999986543  677889999999999999999999999999998766 6899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++|++++.|++.++.|+.++||++|+|+||+++|++......  .++..+......|. ++..+|+|++++++||+++.
T Consensus       161 ~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~  237 (257)
T PRK09242        161 GMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLS--DPDYYEQVIERTPM-RRVGEPEEVAAAVAFLCMPA  237 (257)
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccC--ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999998764422  23333333345565 78889999999999999988


Q ss_pred             CCCeeccEEEecCeee
Q 041914          247 SEFVTGHDLVVDGGFL  262 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~  262 (264)
                      ..+++|+.+.+|||++
T Consensus       238 ~~~~~g~~i~~~gg~~  253 (257)
T PRK09242        238 ASYITGQCIAVDGGFL  253 (257)
T ss_pred             cccccCCEEEECCCeE
Confidence            8899999999999975

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=100.00  E-value=4.2e-42  Score=284.43  Aligned_cols=246  Identities=31%  Similarity=0.438  Sum_probs=209.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|+++||||++|||++++++|+++|++++++.|+.+...+...+... ..++.++.+|++|.+++.++++.+.+.
T Consensus         6 ~~~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~   85 (255)
T PRK06113          6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSK   85 (255)
T ss_pred             ccCcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999988888776554332222221 236788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|...+.  ++ +.+.++|++.+++|+.+++++++.++|+|.+.+ .++||++||..+..+.+++..|++
T Consensus        86 ~~~~d~li~~ag~~~~~--~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~  161 (255)
T PRK06113         86 LGKVDILVNNAGGGGPK--PF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_pred             cCCCCEEEECCCCCCCC--CC-CCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCcchhHH
Confidence            99999999999986543  44 688999999999999999999999999998765 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+|+++|++.++.++.+.||+||+|+||+++|++.....   .++.........|. +++.+|+|+++++++|+++...
T Consensus       162 sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~  237 (255)
T PRK06113        162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI---TPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSPAAS  237 (255)
T ss_pred             HHHHHHHHHHHHHHHhhhhCeEEEEEeccccccccccccc---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            9999999999999999999999999999999999875432   12233333444565 6789999999999999998899


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||...
T Consensus       238 ~~~G~~i~~~gg~~~  252 (255)
T PRK06113        238 WVSGQILTVSGGGVQ  252 (255)
T ss_pred             CccCCEEEECCCccc
Confidence            999999999999654

>PRK06523 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-42  Score=288.43  Aligned_cols=244  Identities=25%  Similarity=0.327  Sum_probs=207.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..++++|++|||||++|||++++++|+++|++|+++.|+..+.        ...++.++++|++|+++++++++++.+.+
T Consensus         4 ~~~~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--------~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   75 (260)
T PRK06523          4 FLELAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--------LPEGVEFVAADLTTAEGCAAVARAVLERL   75 (260)
T ss_pred             CcCCCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--------cCCceeEEecCCCCHHHHHHHHHHHHHHc
Confidence            3468899999999999999999999999999988888875431        12357889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC-CCchhhc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~  168 (264)
                      +++|++|||||.......++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+ +...|++
T Consensus        76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~ii~isS~~~~~~~~~~~~~Y~~  154 (260)
T PRK06523         76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARG-SGVIIHVTSIQRRLPLPESTTAYAA  154 (260)
T ss_pred             CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CcEEEEEecccccCCCCCCcchhHH
Confidence            999999999997643334677889999999999999999999999999998876 68999999999988755 7899999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhh---cCCCCCCCCCCCChHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKL---FEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~---~~~~~~~~~~~~~~edva~~  238 (264)
                      +|++++.|++.++.+++++||++|+|+||+++|++.....       ....++....   .....|. ++..+|+|++++
T Consensus       155 sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~va~~  233 (260)
T PRK06523        155 AKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL-GRPAEPEEVAEL  233 (260)
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc-CCCCCHHHHHHH
Confidence            9999999999999999999999999999999999864321       0111121111   1233566 788899999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeec
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +.||+++..++++|+.|.+|||+..
T Consensus       234 ~~~l~s~~~~~~~G~~~~vdgg~~~  258 (260)
T PRK06523        234 IAFLASDRAASITGTEYVIDGGTVP  258 (260)
T ss_pred             HHHHhCcccccccCceEEecCCccC
Confidence            9999999999999999999999864

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=7.4e-42  Score=283.68  Aligned_cols=245  Identities=24%  Similarity=0.358  Sum_probs=201.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.. .. ...+.+ . ..++.++++|++|.+++.++++++.+.
T Consensus         4 ~~~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK12823          4 QRFAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VH-EVAAELRAAGGEALALTADLETYAGAQAAMAAAVEA   81 (260)
T ss_pred             cccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HH-HHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHH
Confidence            3478999999999999999999999999999888877642 22 222222 2 246788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||.... ..++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..  ++...|++
T Consensus        82 ~~~id~lv~nAg~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~--~~~~~Y~~  157 (260)
T PRK12823         82 FGRIDVLINNVGGTIW-AKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQG-GGAIVNVSSIATRG--INRVPYSA  157 (260)
T ss_pred             cCCCeEEEECCccccC-CCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEcCccccC--CCCCccHH
Confidence            9999999999996532 23778899999999999999999999999999998876 68999999987642  35678999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-----C----CChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-----G----MPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-----~----~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      ||+|++.|++.++.|++++||+||+|+||+++|++.....     .    ...+..........|. +++.+|||+++++
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  236 (260)
T PRK12823        158 AKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM-KRYGTIDEQVAAI  236 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc-ccCCCHHHHHHHH
Confidence            9999999999999999999999999999999998632110     0    0012222333445566 7889999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +||+++...+++|+.+.+|||.+
T Consensus       237 ~~l~s~~~~~~~g~~~~v~gg~~  259 (260)
T PRK12823        237 LFLASDEASYITGTVLPVGGGDL  259 (260)
T ss_pred             HHHcCcccccccCcEEeecCCCC
Confidence            99999888999999999999964

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-42  Score=289.14  Aligned_cols=241  Identities=30%  Similarity=0.452  Sum_probs=205.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.++.....        ..++.++++|++|+++++++++++.+.+++
T Consensus         6 ~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~--------~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (266)
T PRK06171          6 NLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ--------HENYQFVPTDVSSAEEVNHTVAEIIEKFGR   77 (266)
T ss_pred             cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc--------cCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            578999999999999999999999999999888887665431        125778999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCC-------CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           92 LDIMFSNAGILSSSD-------QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        92 id~lv~~ag~~~~~~-------~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +|++|||||......       .++.+.+.++|++++++|+.+++.+++.++|+|.+++ .++||++||..+..+.++..
T Consensus        78 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~  156 (266)
T PRK06171         78 IDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQH-DGVIVNMSSEAGLEGSEGQS  156 (266)
T ss_pred             CCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCCc
Confidence            999999999764321       1345689999999999999999999999999998766 68999999999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCccc-Cccccccc--------CCChHHHHhhcCC--CCCCCCCCCChH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLA-TPLTCHAY--------GMPADEVEKLFEP--QTPLEGVVLRAG  233 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~~~~e  233 (264)
                      .|+++|+++++|++.++.|++++||+||+|+||+++ |++.....        ....++..+.+..  ..|. +++.+||
T Consensus       157 ~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~  235 (266)
T PRK06171        157 CYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTIPL-GRSGKLS  235 (266)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccccC-CCCCCHH
Confidence            999999999999999999999999999999999997 66532111        1112233333333  4576 8999999


Q ss_pred             HHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          234 HVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       234 dva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |||+++.||+++..+++||++|.+|||+.
T Consensus       236 eva~~~~fl~s~~~~~itG~~i~vdgg~~  264 (266)
T PRK06171        236 EVADLVCYLLSDRASYITGVTTNIAGGKT  264 (266)
T ss_pred             HhhhheeeeeccccccceeeEEEecCccc
Confidence            99999999999999999999999999975

>PRK07677 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.5e-42  Score=282.12  Aligned_cols=245  Identities=24%  Similarity=0.406  Sum_probs=204.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+..+..+...+.. ...++.++++|++|+++++++++++.+.++++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            5899999999999999999999999998888877654433222221 124688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|....  .++.+.+.++|++.+++|+.++++++++++|+|.++...++||++||..+..+.+....|+++|+|+
T Consensus        81 ~lI~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~  158 (252)
T PRK07677         81 ALINNAAGNFI--CPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGV  158 (252)
T ss_pred             EEEECCCCCCC--CCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHH
Confidence            99999997543  3777899999999999999999999999999987654368999999999998888899999999999


Q ss_pred             HHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          174 IGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       174 ~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      ++|++.++.|+.+ +||++|+|+||+++|+........ .++..+.+....|. +++.+|+|+++++.||+++...+++|
T Consensus       159 ~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~g  236 (252)
T PRK07677        159 LAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWE-SEEAAKRTIQSVPL-GRLGTPEEIAGLAYFLLSDEAAYING  236 (252)
T ss_pred             HHHHHHHHHHhCcccCeEEEEEeecccccccccccccC-CHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCccccccCC
Confidence            9999999999975 699999999999996432211111 23333344445566 78999999999999999988889999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      +.+.+|||+.+
T Consensus       237 ~~~~~~gg~~~  247 (252)
T PRK07677        237 TCITMDGGQWL  247 (252)
T ss_pred             CEEEECCCeec
Confidence            99999999875

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2e-44  Score=266.98  Aligned_cols=244  Identities=28%  Similarity=0.381  Sum_probs=213.6

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |..+|.|+++++||+..|||+++++.|++.|++|+.++|+++++....++. . ..+..+..|+++.+.+.+.+..    
T Consensus         1 M~t~laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~-p-~~I~Pi~~Dls~wea~~~~l~~----   74 (245)
T KOG1207|consen    1 MKTSLAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET-P-SLIIPIVGDLSAWEALFKLLVP----   74 (245)
T ss_pred             CcccccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC-C-cceeeeEecccHHHHHHHhhcc----
Confidence            345789999999999999999999999999999999999988875554433 2 2488899999987666665543    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      .+.+|.||||||+....  ++.+++.+.|++.|++|+.+++...|...+-+..+...|.||++||.++..+..+...||+
T Consensus        75 v~pidgLVNNAgvA~~~--pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYca  152 (245)
T KOG1207|consen   75 VFPIDGLVNNAGVATNH--PFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCA  152 (245)
T ss_pred             cCchhhhhccchhhhcc--hHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEee
Confidence            36899999999997765  9999999999999999999999999997777776666889999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+|+++++|++|.|+++++||||++.|-.+.|.|-+.-+.  .+.-...+....|. +|+..++||+++++||+|+.++
T Consensus       153 tKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWS--DP~K~k~mL~riPl-~rFaEV~eVVnA~lfLLSd~ss  229 (245)
T KOG1207|consen  153 TKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWS--DPDKKKKMLDRIPL-KRFAEVDEVVNAVLFLLSDNSS  229 (245)
T ss_pred             cHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccC--CchhccchhhhCch-hhhhHHHHHHhhheeeeecCcC
Confidence            99999999999999999999999999999999999765543  33444556677888 8999999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      ..||+++.++|||+.
T Consensus       230 mttGstlpveGGfs~  244 (245)
T KOG1207|consen  230 MTTGSTLPVEGGFSN  244 (245)
T ss_pred             cccCceeeecCCccC
Confidence            999999999999975

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-42  Score=282.49  Aligned_cols=248  Identities=30%  Similarity=0.440  Sum_probs=214.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.++++|+++||||+++||++++++|+++|++|+++.|+.+...+...+... ..++.++++|+++++++.++++++.+.
T Consensus         6 ~~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   85 (256)
T PRK06124          6 RFSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAE   85 (256)
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            4558999999999999999999999999999988888876554333222222 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .+++|++||..+..+.++...|++
T Consensus        86 ~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~  162 (256)
T PRK06124         86 HGRLDILVNNVGARDRR--PLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQG-YGRIIAITSIAGQVARAGDAVYPA  162 (256)
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEeechhccCCCCccHhHH
Confidence            99999999999986543  788899999999999999999999999999998776 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.+++.++.|+++.||++++|+||+++|++.....  ..++....+....|. +++.+|+|++.++++|+++..+
T Consensus       163 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~  239 (256)
T PRK06124        163 AKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMA--ADPAVGPWLAQRTPL-GRWGRPEEIAGAAVFLASPAAS  239 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhc--cChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccC
Confidence            9999999999999999999999999999999999864332  123333444455565 7889999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.+.+|||+.+
T Consensus       240 ~~~G~~i~~dgg~~~  254 (256)
T PRK06124        240 YVNGHVLAVDGGYSV  254 (256)
T ss_pred             CcCCCEEEECCCccc
Confidence            999999999999865

>PRK06483 dihydromonapterin reductase; Provisional

Probab=100.00  E-value=7.9e-42  Score=279.61  Aligned_cols=234  Identities=19%  Similarity=0.203  Sum_probs=198.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.++..+.+.+.    .+.++.+|++|.++++++++++.+.++++|+
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   77 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDGLRA   77 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCCccE
Confidence            589999999999999999999999999999888766543333221    3678999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +|||||.....  ...+.+.++|++++++|+.+++.+++.++|.|++++ ..++||++||..+..+.+++..|+++|+++
T Consensus        78 lv~~ag~~~~~--~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal  155 (236)
T PRK06483         78 IIHNASDWLAE--KPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAAL  155 (236)
T ss_pred             EEECCccccCC--CcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHH
Confidence            99999986543  456778999999999999999999999999998743 147999999999988888999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      ++|++.++.|+++ +||||+|+||++.|+..      ..+...+......|. ++...|+|+++++.||++  ..++||+
T Consensus       156 ~~l~~~~a~e~~~-~irvn~v~Pg~~~~~~~------~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~--~~~~~G~  225 (236)
T PRK06483        156 DNMTLSFAAKLAP-EVKVNSIAPALILFNEG------DDAAYRQKALAKSLL-KIEPGEEEIIDLVDYLLT--SCYVTGR  225 (236)
T ss_pred             HHHHHHHHHHHCC-CcEEEEEccCceecCCC------CCHHHHHHHhccCcc-ccCCCHHHHHHHHHHHhc--CCCcCCc
Confidence            9999999999987 59999999999977532      112222233334565 778899999999999996  6799999


Q ss_pred             EEEecCeeecC
Q 041914          254 DLVVDGGFLIR  264 (264)
Q Consensus       254 ~i~~dgG~~~~  264 (264)
                      +|.+|||+.+|
T Consensus       226 ~i~vdgg~~~~  236 (236)
T PRK06483        226 SLPVDGGRHLK  236 (236)
T ss_pred             EEEeCcccccC
Confidence            99999999987

>PRK06701 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-41  Score=286.40  Aligned_cols=247  Identities=33%  Similarity=0.490  Sum_probs=211.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.++++|++|||||+++||.+++++|+++|++|+++.|+..+..+.+.+.+.  ..++.++.+|+++.+++.++++++.+
T Consensus        41 ~~~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~  120 (290)
T PRK06701         41 SGKLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVR  120 (290)
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            5678899999999999999999999999999988888876543333333332  23688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||..... .++.+.+.++|++.+++|+.+++.+++++++.|++   .+++|++||..+..+.+.+..|+
T Consensus       121 ~~~~iD~lI~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~---~g~iV~isS~~~~~~~~~~~~Y~  196 (290)
T PRK06701        121 ELGRLDILVNNAAFQYPQ-QSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQ---GSAIINTGSITGYEGNETLIDYS  196 (290)
T ss_pred             HcCCCCEEEECCcccCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhh---CCeEEEEecccccCCCCCcchhH
Confidence            999999999999986442 36788999999999999999999999999999965   46999999999998888999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+|++.|+++++.++.++||++++|+||+++|++.....  . ++....+....+. +++.+|+|+++++++|+++..
T Consensus       197 ~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~--~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~ll~~~~  272 (290)
T PRK06701        197 ATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF--D-EEKVSQFGSNTPM-QRPGQPEELAPAYVFLASPDS  272 (290)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc--C-HHHHHHHHhcCCc-CCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999765431  1 2222334445565 778999999999999999989


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      .+++|++|.+|||+.++
T Consensus       273 ~~~~G~~i~idgg~~~~  289 (290)
T PRK06701        273 SYITGQMLHVNGGVIVN  289 (290)
T ss_pred             CCccCcEEEeCCCcccC
Confidence            99999999999998754

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.1e-42  Score=282.00  Aligned_cols=195  Identities=31%  Similarity=0.425  Sum_probs=174.7

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH---HHhhhCCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ---VATSIGVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~---~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+.++.+|+|+|||||+|||.++|.+|+++|++++++.|+.+++.+.   +.+.....+++.++||++|.+++.++++.+
T Consensus         6 ~~e~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~   85 (282)
T KOG1205|consen    6 FMERLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWA   85 (282)
T ss_pred             cHHHhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHH
Confidence            45678999999999999999999999999999988888887765433   222222235999999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .+.||++|+||||||+....  .+++.+.+++.++|++|++|++++++.++|+|++++ .|+||+++|+.|+.+.|....
T Consensus        86 ~~~fg~vDvLVNNAG~~~~~--~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~-~GhIVvisSiaG~~~~P~~~~  162 (282)
T KOG1205|consen   86 IRHFGRVDVLVNNAGISLVG--FLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN-DGHIVVISSIAGKMPLPFRSI  162 (282)
T ss_pred             HHhcCCCCEEEecCcccccc--ccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC-CCeEEEEeccccccCCCcccc
Confidence            99999999999999998843  788899999999999999999999999999999987 899999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCC--ceEEEeeCCcccCcccccc
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHG--IRVNCVSPHGLATPLTCHA  207 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~  207 (264)
                      |++||+|+.+|+.+|+.|+.+.+  |++ .|+||+|+|++....
T Consensus       163 Y~ASK~Al~~f~etLR~El~~~~~~i~i-~V~PG~V~Te~~~~~  205 (282)
T KOG1205|consen  163 YSASKHALEGFFETLRQELIPLGTIIII-LVSPGPIETEFTGKE  205 (282)
T ss_pred             cchHHHHHHHHHHHHHHHhhccCceEEE-EEecCceeecccchh
Confidence            99999999999999999999877  566 999999999976543

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.7e-42  Score=310.66  Aligned_cols=244  Identities=32%  Similarity=0.476  Sum_probs=208.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.+|++|||||++|||+++|++|+++|++|+++.|+.++.. .+.+... .++..+++|++|+++++++++++.+.+++
T Consensus       266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  343 (520)
T PRK06484        266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAK-KLAEALG-DEHLSVQADITDEAAVESAFAQIQARWGR  343 (520)
T ss_pred             ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhC-CceeEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            357999999999999999999999999999888888765443 3333332 35678999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+.... .++.+.+.++|++++++|+.+++++++.++|+|.  + .|+||++||..+..+.+++..|+++|+
T Consensus       344 id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~Y~asKa  419 (520)
T PRK06484        344 LDVLVNNAGIAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLMS--Q-GGVIVNLGSIASLLALPPRNAYCASKA  419 (520)
T ss_pred             CCEEEECCCCcCCC-CChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhc--c-CCEEEEECchhhcCCCCCCchhHHHHH
Confidence            99999999986432 3678899999999999999999999999999993  2 589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      ++++|++.++.|++++||+||+|+||+++|++........ +...+.+....|. +++.+|||+|+.++||+++...+++
T Consensus       420 al~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~dia~~~~~l~s~~~~~~~  497 (520)
T PRK06484        420 AVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASG-RADFDSIRRRIPL-GRLGDPEEVAEAIAFLASPAASYVN  497 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhcccc-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999875432211 1112223344565 7889999999999999998899999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |+.|.+|||+..
T Consensus       498 G~~i~vdgg~~~  509 (520)
T PRK06484        498 GATLTVDGGWTA  509 (520)
T ss_pred             CcEEEECCCccC
Confidence            999999999754

>PRK06940 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-42  Score=285.18  Aligned_cols=233  Identities=24%  Similarity=0.344  Sum_probs=189.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +|+++|||+ +|||++++++|+ +|++|++++|+.++..+...+... ..++.++++|++|.+++.++++++ ++++++|
T Consensus         2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~-~~~g~id   78 (275)
T PRK06940          2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATA-QTLGPVT   78 (275)
T ss_pred             CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHH-HhcCCCC
Confidence            589999998 699999999996 899988888876544333222222 236888999999999999999998 5678999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-------------  160 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-------------  160 (264)
                      +||||||+..         +.++|++++++|+.+++++++.++|.|.+   .+++|+++|..+..+.             
T Consensus        79 ~li~nAG~~~---------~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~~~~~~~~  146 (275)
T PRK06940         79 GLVHTAGVSP---------SQASPEAILKVDLYGTALVLEEFGKVIAP---GGAGVVIASQSGHRLPALTAEQERALATT  146 (275)
T ss_pred             EEEECCCcCC---------chhhHHHHHHHhhHHHHHHHHHHHHHHhh---CCCEEEEEecccccCcccchhhhcccccc
Confidence            9999999742         12579999999999999999999999975   3578899998876542             


Q ss_pred             -----------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC
Q 041914          161 -----------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT  223 (264)
Q Consensus       161 -----------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  223 (264)
                                       +++..|++||+|++.+++.++.|++++||+||+|+||+++|++.........++..+......
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~  226 (275)
T PRK06940        147 PTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS  226 (275)
T ss_pred             ccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC
Confidence                             246789999999999999999999999999999999999999864322111122222333445


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |. +++.+|||+|++++||+++..+++||+.|.+|||+.+
T Consensus       227 p~-~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~~~  265 (275)
T PRK06940        227 PA-GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGATA  265 (275)
T ss_pred             Cc-ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCeEE
Confidence            66 7899999999999999999999999999999999864

>PRK05717 oxidoreductase; Validated

Probab=100.00  E-value=5e-41  Score=277.98  Aligned_cols=246  Identities=29%  Similarity=0.438  Sum_probs=206.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ...+++||+++||||+++||++++++|+++|++|+++.++..+..+. .+... .++.++++|+++.+++.++++++.++
T Consensus         4 ~~~~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~-~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (255)
T PRK05717          4 PNPGHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKV-AKALG-ENAWFIAMDVADEAQVAAGVAEVLGQ   81 (255)
T ss_pred             CCcccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHHcC-CceEEEEccCCCHHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999988887765444332 22222 36789999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||||.......++.+.+.++|++.+++|+.+++.++++++|+|.++  .++||++||..+..+.+....|++
T Consensus        82 ~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~ii~~sS~~~~~~~~~~~~Y~~  159 (255)
T PRK05717         82 FGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAH--NGAIVNLASTRARQSEPDTEAYAA  159 (255)
T ss_pred             hCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CcEEEEEcchhhcCCCCCCcchHH
Confidence            999999999999875543477788999999999999999999999999999765  479999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.|++.++.++.. +|+|++|+||+++|++.....   ............|. ++..+|+|+++.+.+|+++...
T Consensus       160 sKaa~~~~~~~la~~~~~-~i~v~~i~Pg~i~t~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~  234 (255)
T PRK05717        160 SKGGLLALTHALAISLGP-EIRVNAVSPGWIDARDPSQRR---AEPLSEADHAQHPA-GRVGTVEDVAAMVAWLLSRQAG  234 (255)
T ss_pred             HHHHHHHHHHHHHHHhcC-CCEEEEEecccCcCCcccccc---chHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCchhc
Confidence            999999999999999986 599999999999999754321   11122222234455 7889999999999999988888


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.+.+|||+..
T Consensus       235 ~~~g~~~~~~gg~~~  249 (255)
T PRK05717        235 FVTGQEFVVDGGMTR  249 (255)
T ss_pred             CccCcEEEECCCceE
Confidence            999999999999763

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4.4e-41  Score=277.36  Aligned_cols=250  Identities=38%  Similarity=0.546  Sum_probs=214.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++++++|||||+++||.+++++|+++|++|+++.|+..+..+.........++.++++|++|+++++++++++.+++++
T Consensus         2 ~~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (251)
T PRK07231          2 RLEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGS   81 (251)
T ss_pred             CcCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            57899999999999999999999999999988888887654433332222346889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.++++|.+++ .++||++||..+..+.++...|+.+|+
T Consensus        82 ~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~sk~  159 (251)
T PRK07231         82 VDILVNNAGTTHRN-GPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEG-GGAIVNVASTAGLRPRPGLGWYNASKG  159 (251)
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhcCCCCCchHHHHHHH
Confidence            99999999986543 3677889999999999999999999999999998766 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +++.+++.++.++++.||++++++||++.|++.........++....+....|. +++.+|+|+++++++|+++...+++
T Consensus       160 ~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  238 (251)
T PRK07231        160 AVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPL-GRLGTPEDIANAALFLASDEASWIT  238 (251)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCC-CCCcCHHHHHHHHHHHhCccccCCC
Confidence            999999999999999999999999999999987654322212333334445555 7889999999999999998888999


Q ss_pred             ccEEEecCeeecC
Q 041914          252 GHDLVVDGGFLIR  264 (264)
Q Consensus       252 G~~i~~dgG~~~~  264 (264)
                      |+.+.+|||..++
T Consensus       239 g~~~~~~gg~~~~  251 (251)
T PRK07231        239 GVTLVVDGGRCVG  251 (251)
T ss_pred             CCeEEECCCccCc
Confidence            9999999998764

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=100.00  E-value=5.6e-41  Score=277.07  Aligned_cols=241  Identities=27%  Similarity=0.367  Sum_probs=208.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++++|++||||++++||.+++++|+++|++|+++.|+.      ..  ....++.++++|+++.++++++++++.++++
T Consensus         4 ~~~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~------~~--~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   75 (252)
T PRK08220          4 MDFSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF------LT--QEDYPFATFVLDVSDAAAVAQVCQRLLAETG   75 (252)
T ss_pred             cCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch------hh--hcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            558899999999999999999999999999988888865      11  1123678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|
T Consensus        76 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~ss~~~~~~~~~~~~Y~~sK  152 (252)
T PRK08220         76 PLDVLVNAAGILRMG--ATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQR-SGAIVTVGSNAAHVPRIGMAAYGASK  152 (252)
T ss_pred             CCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECCchhccCCCCCchhHHHH
Confidence            999999999987654  778889999999999999999999999999998876 68999999999998888999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh------HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA------DEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ++++.|++.++.|++++||+||++.||+++|++.........      ....+.+....|. +++.+|+|+|+++++|++
T Consensus       153 ~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  231 (252)
T PRK08220        153 AALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPL-GKIARPQEIANAVLFLAS  231 (252)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCC-cccCCHHHHHHHHHHHhc
Confidence            999999999999999999999999999999998654321111      0011223334455 789999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|+++.+|||++|
T Consensus       232 ~~~~~~~g~~i~~~gg~~~  250 (252)
T PRK08220        232 DLASHITLQDIVVDGGATL  250 (252)
T ss_pred             chhcCccCcEEEECCCeec
Confidence            9899999999999999876

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=100.00  E-value=7.4e-41  Score=275.42  Aligned_cols=243  Identities=22%  Similarity=0.333  Sum_probs=206.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++|+++|||+++|||++++++|+++|++|+++.++.....+...+.. . ..++..+.+|++|.+++.++++++.+.++
T Consensus         1 ~~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (246)
T PRK12938          1 MSQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG   80 (246)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence            468999999999999999999999999997776554433322222222 2 23678889999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||+|.....  ++.+.+.++|++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.+++..|+++|
T Consensus        81 ~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~y~~sK  157 (246)
T PRK12938         81 EIDVLVNNAGITRDV--VFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAK  157 (246)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEechhccCCCCCChhHHHHH
Confidence            999999999986543  788899999999999999999999999999998766 68999999999998989999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|++.++.++.+.||++|+|+||+++|++.....    ++..+.+....|. .++.+++|+++.+.||+++...++
T Consensus       158 ~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~v~~~~~~l~~~~~~~~  232 (246)
T PRK12938        158 AGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR----PDVLEKIVATIPV-RRLGSPDEIGSIVAWLASEESGFS  232 (246)
T ss_pred             HHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcC----hHHHHHHHhcCCc-cCCcCHHHHHHHHHHHcCcccCCc
Confidence            99999999999999999999999999999999875431    2222333334455 678899999999999999889999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.+.+|||+.+
T Consensus       233 ~g~~~~~~~g~~~  245 (246)
T PRK12938        233 TGADFSLNGGLHM  245 (246)
T ss_pred             cCcEEEECCcccC
Confidence            9999999999764

>PRK08628 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.3e-41  Score=277.77  Aligned_cols=248  Identities=27%  Similarity=0.377  Sum_probs=206.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.+.. +...+... ..++.++++|++++++++++++++.+.
T Consensus         2 ~~~l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (258)
T PRK08628          2 DLNLKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAK   80 (258)
T ss_pred             CCCcCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            3568999999999999999999999999999988888876554 32222221 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  .+.+.+ ++|++.+++|+.+++.+++.++|.|++.  .++|+++||..+..+.+++..|++
T Consensus        81 ~~~id~vi~~ag~~~~~--~~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~iv~~ss~~~~~~~~~~~~Y~~  155 (258)
T PRK08628         81 FGRIDGLVNNAGVNDGV--GLEAGR-EAFVASLERNLIHYYVMAHYCLPHLKAS--RGAIVNISSKTALTGQGGTSGYAA  155 (258)
T ss_pred             cCCCCEEEECCcccCCC--cccCCH-HHHHHHHhhhhHHHHHHHHHHHHHhhcc--CcEEEEECCHHhccCCCCCchhHH
Confidence            99999999999975433  444444 9999999999999999999999998764  479999999999999899999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ||++++++++.++.|+.++||++|+|+||+++|++...+...  .............|...++.+|+|+++.+++++++.
T Consensus       156 sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~  235 (258)
T PRK08628        156 AKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEIADTAVFLLSER  235 (258)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999999986543211  112222222233454347889999999999999998


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+.+.+|||++.
T Consensus       236 ~~~~~g~~~~~~gg~~~  252 (258)
T PRK08628        236 SSHTTGQWLFVDGGYVH  252 (258)
T ss_pred             hccccCceEEecCCccc
Confidence            89999999999999864

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.1e-40  Score=282.82  Aligned_cols=245  Identities=30%  Similarity=0.405  Sum_probs=202.7

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ..+..++++|++|||||++|||++++++|+++|++|+++.+......+...+.+.  ..++.++++|++|.+++.+++++
T Consensus         4 ~~~~~~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~   83 (306)
T PRK07792          4 TTNTTDLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVAT   83 (306)
T ss_pred             ccCCcCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHH
Confidence            4456789999999999999999999999999999988877654433333333322  34788999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC------CCcEEEEecCCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG------VRGSIVCTASVAGSC  158 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~------~~~~iv~iss~~~~~  158 (264)
                      +.+ ++++|+||||||+....  .+.+.+.++|++.+++|+.+++++++.++|+|+++.      ..|+||++||..+..
T Consensus        84 ~~~-~g~iD~li~nAG~~~~~--~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~  160 (306)
T PRK07792         84 AVG-LGGLDIVVNNAGITRDR--MLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLV  160 (306)
T ss_pred             HHH-hCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccccc
Confidence            998 99999999999987654  678899999999999999999999999999997531      137999999999998


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      +.++...|+++|+++++|++.++.|++++||+||+|+|| ..|+|........ .+...  ..     ....+|||+++.
T Consensus       161 ~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg-~~t~~~~~~~~~~-~~~~~--~~-----~~~~~pe~va~~  231 (306)
T PRK07792        161 GPVGQANYGAAKAGITALTLSAARALGRYGVRANAICPR-ARTAMTADVFGDA-PDVEA--GG-----IDPLSPEHVVPL  231 (306)
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCC-CCCchhhhhcccc-chhhh--hc-----cCCCCHHHHHHH
Confidence            888999999999999999999999999999999999999 4888764322111 11000  00     123489999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeec
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +.||+++...+++|++|.+|||+..
T Consensus       232 v~~L~s~~~~~~tG~~~~v~gg~~~  256 (306)
T PRK07792        232 VQFLASPAAAEVNGQVFIVYGPMVT  256 (306)
T ss_pred             HHHHcCccccCCCCCEEEEcCCeEE
Confidence            9999998888999999999999753

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-40  Score=276.49  Aligned_cols=246  Identities=27%  Similarity=0.457  Sum_probs=207.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|++|||||+++||.+++++|+++|++|+++.|+.....+...+..   ...++.++.+|+++.+++.++++++.+.+++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999998888877554433222221   1136889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..+++|++||..+..+.+....|++||+
T Consensus        82 id~vv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKa  159 (259)
T PRK12384         82 VDLLVYNAGIAKAA--FITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKF  159 (259)
T ss_pred             CCEEEECCCcCCCC--CcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHH
Confidence            99999999987654  7888999999999999999999999999999987543579999999988888888899999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcc-cCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGL-ATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v-~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      |++++++.++.|++++||+||+|+||++ .+++.....       ..+.++..+.+....|. +++.+++|+++++++|+
T Consensus       160 a~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dv~~~~~~l~  238 (259)
T PRK12384        160 GGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPL-KRGCDYQDVLNMLLFYA  238 (259)
T ss_pred             HHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcc-cCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999975 666654221       11233444444445666 78999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++...+++|++|.+|||..+
T Consensus       239 ~~~~~~~~G~~~~v~~g~~~  258 (259)
T PRK12384        239 SPKASYCTGQSINVTGGQVM  258 (259)
T ss_pred             CcccccccCceEEEcCCEEe
Confidence            98888999999999999865

>PRK12939 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-40  Score=273.59  Aligned_cols=247  Identities=33%  Similarity=0.480  Sum_probs=212.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |.++++|+++||||+++||++++++|+++|++|+++.|+.++......+... ..++.++++|++|.++++++++++.+.
T Consensus         2 ~~~~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (250)
T PRK12939          2 ASNLAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAA   81 (250)
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999988887776554433332222 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.++|++.++.|+.+++.+++.++|+|.+++ .+++|++||..+..+.+....|++
T Consensus        82 ~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~y~~  158 (250)
T PRK12939         82 LGGLDGLVNNAGITNSK--SATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSG-RGRIVNLASDTALWGAPKLGAYVA  158 (250)
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEECchhhccCCCCcchHHH
Confidence            99999999999987654  677889999999999999999999999999998866 789999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.+++.++.+++.++|+++.|.||+++|++......   ......+....|. .++.+++|+++++++++++..+
T Consensus       159 sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  234 (250)
T PRK12939        159 SKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPA---DERHAYYLKGRAL-ERLQVPDDVAGAVLFLLSDAAR  234 (250)
T ss_pred             HHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCC---hHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCcccc
Confidence            99999999999999999999999999999999998754321   1223333344555 7789999999999999988888


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||++|
T Consensus       235 ~~~G~~i~~~gg~~~  249 (250)
T PRK12939        235 FVTGQLLPVNGGFVM  249 (250)
T ss_pred             CccCcEEEECCCccc
Confidence            999999999999987

>PRK07576 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-40  Score=276.68  Aligned_cols=248  Identities=25%  Similarity=0.328  Sum_probs=207.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +|+++++|++|||||++|||.+++++|+++|++|+++.|+.++..+...+... ..+++++++|++++++++++++++.+
T Consensus         3 ~~~~~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~   82 (264)
T PRK07576          3 TMFDFAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIAD   82 (264)
T ss_pred             ccccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            44679999999999999999999999999999988888876654333222221 23578899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.++++++|.|+++  .++||++||..+..+.+++..|+
T Consensus        83 ~~~~iD~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~--~g~iv~iss~~~~~~~~~~~~Y~  158 (264)
T PRK07576         83 EFGPIDVLVSGAAGNFPA--PAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRP--GASIIQISAPQAFVPMPMQAHVC  158 (264)
T ss_pred             HcCCCCEEEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCEEEEECChhhccCCCCccHHH
Confidence            999999999999876443  67888999999999999999999999999999754  47999999999988889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|++++.|+++++.|+.++||++++|+||+++ |+......  +.+.....+....|. ++..+|+|+++.+++|+++.
T Consensus       159 asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~  235 (264)
T PRK07576        159 AAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLA--PSPELQAAVAQSVPL-KRNGTKQDIANAALFLASDM  235 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcc--cCHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcChh
Confidence            999999999999999999999999999999997 55333221  122222333334555 77889999999999999988


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+.+.+|||+.+
T Consensus       236 ~~~~~G~~~~~~gg~~~  252 (264)
T PRK07576        236 ASYITGVVLPVDGGWSL  252 (264)
T ss_pred             hcCccCCEEEECCCccc
Confidence            88999999999999753

>PRK06500 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-40  Score=273.87  Aligned_cols=243  Identities=34%  Similarity=0.507  Sum_probs=205.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+|+++||||+++||++++++|+++|++|+++.|+.+... ...+... .++.++++|++|.+++..+++.+.+.+++
T Consensus         3 ~~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (249)
T PRK06500          3 RLQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLE-AARAELG-ESALVIRADAGDVAAQKALAQALAEAFGR   80 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHH-HHHHHhC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            577899999999999999999999999999888877654433 3333332 36788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.++|++.+++|+.+++.++++++|+|.+   .+++|+++|..+..+.+....|+++|+
T Consensus        81 id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~i~~~S~~~~~~~~~~~~Y~~sK~  155 (249)
T PRK06500         81 LDAVFINAGVAKFA--PLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLAN---PASIVLNGSINAHIGMPNSSVYAASKA  155 (249)
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEechHhccCCCCccHHHHHHH
Confidence            99999999987543  6778899999999999999999999999999865   468999999888888889999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      +++++++.++.|++++||++++++||+++|++.....  ....+.....+....|. .++.+|+|+++++++|+++...+
T Consensus       156 a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  234 (249)
T PRK06500        156 ALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPL-GRFGTPEEIAKAVLYLASDESAF  234 (249)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccC
Confidence            9999999999999999999999999999999865321  11122232333334455 67889999999999999988899


Q ss_pred             eeccEEEecCeee
Q 041914          250 VTGHDLVVDGGFL  262 (264)
Q Consensus       250 ~~G~~i~~dgG~~  262 (264)
                      ++|+.|.+|||+.
T Consensus       235 ~~g~~i~~~gg~~  247 (249)
T PRK06500        235 IVGSEIIVDGGMS  247 (249)
T ss_pred             ccCCeEEECCCcc
Confidence            9999999999964

>PRK12742 oxidoreductase; Provisional

Probab=100.00  E-value=1.6e-40  Score=271.98  Aligned_cols=233  Identities=30%  Similarity=0.408  Sum_probs=194.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.++..+..+.+....   .+.++.+|++|.+++.++++    .+++
T Consensus         3 ~~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~---~~~~~~~D~~~~~~~~~~~~----~~~~   75 (237)
T PRK12742          3 AFTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQET---GATAVQTDSADRDAVIDVVR----KSGA   75 (237)
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHh---CCeEEecCCCCHHHHHHHHH----HhCC
Confidence            5789999999999999999999999999998777665544333333322   34678899999998877765    3578


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK  170 (264)
                      +|++|||+|.....  +..+.++++|++.+++|+.+++.+++.+++.|++   .+++|++||..+. .+.++...|+++|
T Consensus        76 id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y~~sK  150 (237)
T PRK12742         76 LDILVVNAGIAVFG--DALELDADDIDRLFKINIHAPYHASVEAARQMPE---GGRIIIIGSVNGDRMPVAGMAAYAASK  150 (237)
T ss_pred             CcEEEECCCCCCCC--CcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhc---CCeEEEEeccccccCCCCCCcchHHhH
Confidence            99999999987543  5677899999999999999999999999999964   4799999999884 5778899999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.+++.++.+++++||+||+|+||+++|++.....     ...+......|. +++.+|+|+++.+.||+++...++
T Consensus       151 aa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~-----~~~~~~~~~~~~-~~~~~p~~~a~~~~~l~s~~~~~~  224 (237)
T PRK12742        151 SALQGMARGLARDFGPRGITINVVQPGPIDTDANPANG-----PMKDMMHSFMAI-KRHGRPEEVAGMVAWLAGPEASFV  224 (237)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCcccCCcccccc-----HHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccCcc
Confidence            99999999999999999999999999999999864321     112222334455 788999999999999999999999


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                      +|++|.+|||+.
T Consensus       225 ~G~~~~~dgg~~  236 (237)
T PRK12742        225 TGAMHTIDGAFG  236 (237)
T ss_pred             cCCEEEeCCCcC
Confidence            999999999974

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=2e-40  Score=273.45  Aligned_cols=245  Identities=28%  Similarity=0.407  Sum_probs=206.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +.++++|||||+++||++++++|+++|++|+++..+..+..+.+.+...  ..++.++++|++|++++.++++++.+.++
T Consensus         2 ~~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (250)
T PRK08063          2 FSGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG   81 (250)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999977654433333333333322  24688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||+|.....  ++.+.+.++|++.+++|+.+++.++++++|+|++++ .++||++||..+..+.+++..|+++|
T Consensus        82 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~y~~sK  158 (250)
T PRK08063         82 RLDVFVNNAASGVLR--PAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVG-GGKIISLSSLGSIRYLENYTTVGVSK  158 (250)
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCccHHHHHH
Confidence            999999999987554  788899999999999999999999999999998876 78999999998888888899999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|+++++.++.+.||++++|.||++.|++.....  .............|. ++.++++|+++.+++++++...++
T Consensus       159 ~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~~~~~~  235 (250)
T PRK08063        159 AALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFP--NREELLEDARAKTPA-GRMVEPEDVANAVLFLCSPEADMI  235 (250)
T ss_pred             HHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhcc--CchHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCchhcCc
Confidence            99999999999999999999999999999999865432  112233333334444 678999999999999998888899


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.+.+|||..+
T Consensus       236 ~g~~~~~~gg~~~  248 (250)
T PRK08063        236 RGQTIIVDGGRSL  248 (250)
T ss_pred             cCCEEEECCCeee
Confidence            9999999999875

>PRK12744 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.6e-40  Score=275.33  Aligned_cols=248  Identities=24%  Similarity=0.389  Sum_probs=195.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch---hhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD---ELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .++++|++|||||++|||+++++.|+++|++|+++.++..   +..+...+.+.  ..++.++++|++++++++++++++
T Consensus         4 ~~l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~   83 (257)
T PRK12744          4 HSLKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDA   83 (257)
T ss_pred             CCCCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHH
Confidence            3467899999999999999999999999999777765432   22222222221  236888999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .+.++++|++|||||.....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+   .+++++++|.....+.+.+..
T Consensus        84 ~~~~~~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~~~iv~~~ss~~~~~~~~~~~  158 (257)
T PRK12744         84 KAAFGRPDIAINTVGKVLKK--PIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLND---NGKIVTLVTSLLGAFTPFYSA  158 (257)
T ss_pred             HHhhCCCCEEEECCcccCCC--CcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhcc---CCCEEEEecchhcccCCCccc
Confidence            99999999999999986553  6778899999999999999999999999999975   357776643333345678899


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC-CCCCCChHHHHHHHHHHhC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL-EGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~edva~~~~~l~s  244 (264)
                      |++||+|++.|+++++.|+.++||+|++++||++.|++....................|. ..++.+|+|+++.+.||++
T Consensus       159 Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~  238 (257)
T PRK12744        159 YAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTDIEDIVPFIRFLVT  238 (257)
T ss_pred             chhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCCHHHHHHHHHHhhc
Confidence            999999999999999999999999999999999999976432211100110111111222 1368899999999999998


Q ss_pred             CCCCCeeccEEEecCeeecC
Q 041914          245 RDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~~  264 (264)
                      + ..+++|+++.+|||+.+|
T Consensus       239 ~-~~~~~g~~~~~~gg~~~~  257 (257)
T PRK12744        239 D-GWWITGQTILINGGYTTK  257 (257)
T ss_pred             c-cceeecceEeecCCccCC
Confidence            5 679999999999999875

>PRK07890 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-40  Score=274.80  Aligned_cols=248  Identities=28%  Similarity=0.381  Sum_probs=210.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+.+|++|||||++|||++++++|+++|++|+++.|+.++..+ +.....  ..++.++.+|++|+++++++++++.+++
T Consensus         2 ~l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (258)
T PRK07890          2 LLKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDE-VAAEIDDLGRRALAVPTDITDEDQCANLVALALERF   80 (258)
T ss_pred             ccCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            3678999999999999999999999999998888887655433 333322  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.+.+.|.+.  .++||++||..+..+.+++..|+++
T Consensus        81 g~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~s  157 (258)
T PRK07890         81 GRVDALVNNAFRVPSM-KPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHSQPKYGAYKMA  157 (258)
T ss_pred             CCccEEEECCccCCCC-CCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccCCCCcchhHHH
Confidence            9999999999976442 367788999999999999999999999999999765  3699999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      |++++.+++.++.+++++||++++++||++.|++.....       ....++....+....|. +++.+|+|++++++++
T Consensus       158 K~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~~l  236 (258)
T PRK07890        158 KGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDL-KRLPTDDEVASAVLFL  236 (258)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCc-cccCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999754321       11223333333344555 6788999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++...+++|+++.+|||.+++
T Consensus       237 ~~~~~~~~~G~~i~~~gg~~~~  258 (258)
T PRK07890        237 ASDLARAITGQTLDVNCGEYHH  258 (258)
T ss_pred             cCHhhhCccCcEEEeCCccccC
Confidence            9987889999999999998763

>PRK12937 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-40  Score=271.72  Aligned_cols=241  Identities=32%  Similarity=0.453  Sum_probs=207.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|+++||||+++||++++++|+++|++++++.++.++..+...+.+.  ..++.++++|+++.++++++++++.+.+
T Consensus         2 ~~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (245)
T PRK12937          2 TLSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAF   81 (245)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            57889999999999999999999999999988887766544343333322  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|.....  ++.+.+.++|++++++|+.+++.+++.++|.|.+   .++||++||..+..+.+++..|+++
T Consensus        82 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~Y~~s  156 (245)
T PRK12937         82 GRIDVLVNNAGVMPLG--TIADFDLEDFDRTIATNLRGAFVVLREAARHLGQ---GGRIINLSTSVIALPLPGYGPYAAS  156 (245)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhcc---CcEEEEEeeccccCCCCCCchhHHH
Confidence            9999999999987543  7778899999999999999999999999999865   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.|++.++.++++.||++++++||+++|++....  .. +.....+....|. ++..+|+|+++.+.||+++...+
T Consensus       157 K~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~--~~-~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~  232 (245)
T PRK12937        157 KAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNG--KS-AEQIDQLAGLAPL-ERLGTPEEIAAAVAFLAGPDGAW  232 (245)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhccc--CC-HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999986432  11 2223344455566 78889999999999999988899


Q ss_pred             eeccEEEecCee
Q 041914          250 VTGHDLVVDGGF  261 (264)
Q Consensus       250 ~~G~~i~~dgG~  261 (264)
                      ++|++|.+|||+
T Consensus       233 ~~g~~~~~~~g~  244 (245)
T PRK12937        233 VNGQVLRVNGGF  244 (245)
T ss_pred             ccccEEEeCCCC
Confidence            999999999986

>TIGR02415 23BDH acetoin reductases

Probab=100.00  E-value=3.9e-40  Score=272.34  Aligned_cols=245  Identities=31%  Similarity=0.473  Sum_probs=208.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      |+++|||++++||.+++++|+++|++|+++.|+.....+...+... ..++.++.+|++|++++.++++++.++++++|+
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~   80 (254)
T TIGR02415         1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV   80 (254)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999988888875544333333222 236889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      ||||+|.....  ++.+.+.++|++.+++|+.+++.+++.+++.|++.+..+++|++||..+..+.+....|+++|++++
T Consensus        81 vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  158 (254)
T TIGR02415        81 MVNNAGVAPIT--PILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVR  158 (254)
T ss_pred             EEECCCcCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHH
Confidence            99999986554  7888999999999999999999999999999988653579999999999999999999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-------ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-------PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      .|++.++.++++.||++++++||+++|++.......       +..+....+....+. +++.+|||+++++.||+++..
T Consensus       159 ~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~  237 (254)
T TIGR02415       159 GLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIAL-GRPSEPEDVAGLVSFLASEDS  237 (254)
T ss_pred             HHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCC-CCCCCHHHHHHHHHhhccccc
Confidence            999999999999999999999999999986533211       111222223334555 788999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      .+++|+++.+|||+.+
T Consensus       238 ~~~~g~~~~~d~g~~~  253 (254)
T TIGR02415       238 DYITGQSILVDGGMVY  253 (254)
T ss_pred             CCccCcEEEecCCccC
Confidence            9999999999999875

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06949 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.4e-40  Score=272.61  Aligned_cols=247  Identities=30%  Similarity=0.447  Sum_probs=210.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++++|+++||||+++||++++++|+++|++|+++.|+.++..+...+.. ...+++++.+|+++.+++.++++++.+.
T Consensus         4 ~~~~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (258)
T PRK06949          4 SINLEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETE   83 (258)
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHh
Confidence            345889999999999999999999999999998888887665433322221 1246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-------CcEEEEecCCCCCCCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-------RGSIVCTASVAGSCGGK  161 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-------~~~iv~iss~~~~~~~~  161 (264)
                      ++++|++|||+|.....  ++.+.+.++|+.++++|+.+++.+++.++|.|.++..       .+++|+++|..+..+.+
T Consensus        84 ~~~~d~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~  161 (258)
T PRK06949         84 AGTIDILVNNSGVSTTQ--KLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLP  161 (258)
T ss_pred             cCCCCEEEECCCCCCCC--CcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCC
Confidence            99999999999986543  6778889999999999999999999999999986541       47999999999988888


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      ....|+++|++++.+++.++.+++++||+|++|+||+++|++......   ++....+....|. ++..+|+|+++.++|
T Consensus       162 ~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~-~~~~~p~~~~~~~~~  237 (258)
T PRK06949        162 QIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE---TEQGQKLVSMLPR-KRVGKPEDLDGLLLL  237 (258)
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC---hHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            899999999999999999999999999999999999999998754321   1222333344555 789999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeee
Q 041914          242 LACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |+++...+++|+.|.+|||+.
T Consensus       238 l~~~~~~~~~G~~i~~dgg~~  258 (258)
T PRK06949        238 LAADESQFINGAIISADDGFG  258 (258)
T ss_pred             HhChhhcCCCCcEEEeCCCCC
Confidence            999999999999999999973

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=100.00  E-value=2.7e-40  Score=270.92  Aligned_cols=236  Identities=22%  Similarity=0.375  Sum_probs=201.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +|||||++|||.+++++|+++|++|+++.++..+..+...+.+.  ..++.++++|++|.+++.++++++.+.++++|++
T Consensus         1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l   80 (239)
T TIGR01831         1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV   80 (239)
T ss_pred             CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            58999999999999999999999988888776544444443332  2468899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHH-HHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA-RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l-~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      |||+|.....  ++.+.+.++|++++++|+.+++++++.++ |.+++++ .++||++||..+..+.+++..|+++|++++
T Consensus        81 i~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~  157 (239)
T TIGR01831        81 VLNAGITRDA--AFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQ-GGRIITLASVSGVMGNRGQVNYSAAKAGLI  157 (239)
T ss_pred             EECCCCCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcC-CeEEEEEcchhhccCCCCCcchHHHHHHHH
Confidence            9999987654  67778999999999999999999999875 5555445 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccE
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD  254 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~  254 (264)
                      .++++++.|++++||++++++||+++|++.....    +. .+......|. +++.+|+|+++.++||+++...+++|+.
T Consensus       158 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~g~~  231 (239)
T TIGR01831       158 GATKALAVELAKRKITVNCIAPGLIDTEMLAEVE----HD-LDEALKTVPM-NRMGQPAEVASLAGFLMSDGASYVTRQV  231 (239)
T ss_pred             HHHHHHHHHHhHhCeEEEEEEEccCccccchhhh----HH-HHHHHhcCCC-CCCCCHHHHHHHHHHHcCchhcCccCCE
Confidence            9999999999999999999999999999875431    11 2222334566 7889999999999999999999999999


Q ss_pred             EEecCeee
Q 041914          255 LVVDGGFL  262 (264)
Q Consensus       255 i~~dgG~~  262 (264)
                      +.+|||++
T Consensus       232 ~~~~gg~~  239 (239)
T TIGR01831       232 ISVNGGMV  239 (239)
T ss_pred             EEecCCcC
Confidence            99999974

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK06138 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-40  Score=270.00  Aligned_cols=248  Identities=37%  Similarity=0.555  Sum_probs=211.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||+++||.+++++|+++|++|+++.|+.+...+...+.....++.++++|++|+++++++++++.+++++
T Consensus         2 ~~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~   81 (252)
T PRK06138          2 RLAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGR   81 (252)
T ss_pred             CCCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            57899999999999999999999999999988888886654433333222346889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||+|.....  ++.+.+.+++++.+++|+.+++.+++.++|.|++++ .++|+++||..+..+.++...|+.+|+
T Consensus        82 id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~sS~~~~~~~~~~~~Y~~sK~  158 (252)
T PRK06138         82 LDVLVNNAGFGCGG--TVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQG-GGSIVNTASQLALAGGRGRAAYVASKG  158 (252)
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCCccHHHHHHH
Confidence            99999999987654  677889999999999999999999999999998876 689999999999888889999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      +++.+++.++.|+.+.||++++++||.+.|++.......  ..+..........+. .++.+++|+++.+++++.+...+
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~  237 (252)
T PRK06138        159 AIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPM-NRFGTAEEVAQAALFLASDESSF  237 (252)
T ss_pred             HHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcC
Confidence            999999999999999999999999999999987654321  122222223223344 56789999999999999988899


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.+.+|||+++
T Consensus       238 ~~g~~~~~~~g~~~  251 (252)
T PRK06138        238 ATGTTLVVDGGWLA  251 (252)
T ss_pred             ccCCEEEECCCeec
Confidence            99999999999875

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=4e-40  Score=269.28  Aligned_cols=233  Identities=25%  Similarity=0.449  Sum_probs=198.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+|+++|||++++||++++++|+++|++|+++.|+.....        ..++.++++|++++      ++++.+.+++
T Consensus         2 ~l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--------~~~~~~~~~D~~~~------~~~~~~~~~~   67 (235)
T PRK06550          2 EFMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL--------SGNFHFLQLDLSDD------LEPLFDWVPS   67 (235)
T ss_pred             CCCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc--------CCcEEEEECChHHH------HHHHHHhhCC
Confidence            578999999999999999999999999999888887654321        13578899999987      4555556689


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|..... .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|+.+|+
T Consensus        68 id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~  145 (235)
T PRK06550         68 VDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERK-SGIIINMCSIASFVAGGGGAAYTASKH  145 (235)
T ss_pred             CCEEEECCCCCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcccHHHHH
Confidence            99999999976432 3677889999999999999999999999999998776 689999999999988899999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +++.|++.++.|++++||++|+|+||+++|++.....  ..+.....+....|. +++.+|||+|+.++||+++...+++
T Consensus       146 a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~s~~~~~~~  222 (235)
T PRK06550        146 ALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADF--EPGGLADWVARETPI-KRWAEPEEVAELTLFLASGKADYMQ  222 (235)
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEeeCCccCccccccc--CchHHHHHHhccCCc-CCCCCHHHHHHHHHHHcChhhccCC
Confidence            9999999999999999999999999999999764322  122233333445566 7889999999999999998889999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |+++.+|||+++
T Consensus       223 g~~~~~~gg~~~  234 (235)
T PRK06550        223 GTIVPIDGGWTL  234 (235)
T ss_pred             CcEEEECCceec
Confidence            999999999876

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=100.00  E-value=1e-39  Score=269.19  Aligned_cols=247  Identities=30%  Similarity=0.460  Sum_probs=211.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      |++|++|||||+++||++++++|+++|++|+++.|+.....+...+... ..++.++++|++|.++++++++++.+++++
T Consensus         1 ~~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~   80 (250)
T TIGR03206         1 LKDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP   80 (250)
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5689999999999999999999999999988888776544332222221 246889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.+++.|++.+ .+++|++||..+..+.+....|+.+|+
T Consensus        81 ~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~iss~~~~~~~~~~~~Y~~sK~  157 (250)
T TIGR03206        81 VDVLVNNAGWDKFG--PFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERG-AGRIVNIASDAARVGSSGEAVYAACKG  157 (250)
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEECchhhccCCCCCchHHHHHH
Confidence            99999999986443  677889999999999999999999999999998766 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      +++.++++++.++.+.||+++.++||+++|++.......  ........+....|. +++.+++|+|+++.+|++++..+
T Consensus       158 a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  236 (250)
T TIGR03206       158 GLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPL-GRLGQPDDLPGAILFFSSDDASF  236 (250)
T ss_pred             HHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCc-cCCcCHHHHHHHHHHHcCcccCC
Confidence            999999999999998899999999999999986544321  222333444455565 78899999999999999999999


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|++|.+|||+.+
T Consensus       237 ~~g~~~~~~~g~~~  250 (250)
T TIGR03206       237 ITGQVLSVSGGLTM  250 (250)
T ss_pred             CcCcEEEeCCCccC
Confidence            99999999999864

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=100.00  E-value=1.2e-39  Score=267.77  Aligned_cols=243  Identities=26%  Similarity=0.445  Sum_probs=206.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||+++||++++++|+++|+.|++..|+.++..+ +..... .++.++.+|+++.++++++++++.+.++
T Consensus         2 ~~~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T PRK12936          2 FDLSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEA-LAAELG-ERVKIFPANLSDRDEVKALGQKAEADLE   79 (245)
T ss_pred             cCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHhC-CceEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            46788999999999999999999999999987766666554433 322222 3678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|...+.  ++.+.+.++|++.+++|+.+++++++.+.+.+.+++ .+++|++||..+..+.+....|+++|
T Consensus        80 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sk  156 (245)
T PRK12936         80 GVDILVNNAGITKDG--LFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRR-YGRIINITSVVGVTGNPGQANYCASK  156 (245)
T ss_pred             CCCEEEECCCCCCCC--ccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhC-CCEEEEECCHHhCcCCCCCcchHHHH
Confidence            999999999987654  677888999999999999999999999999887765 68999999999999989999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +++..+++.++.++.+.||++++++||+++|++.....    +...+......|. .++.+|+|+++.+.+|+++...++
T Consensus       157 ~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~ia~~~~~l~~~~~~~~  231 (245)
T PRK12936        157 AGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLN----DKQKEAIMGAIPM-KRMGTGAEVASAVAYLASSEAAYV  231 (245)
T ss_pred             HHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccC----hHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcCccccCc
Confidence            99999999999999999999999999999999765431    1222222334455 678899999999999998888899


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|++|.+|||+++
T Consensus       232 ~G~~~~~~~g~~~  244 (245)
T PRK12936        232 TGQTIHVNGGMAM  244 (245)
T ss_pred             CCCEEEECCCccc
Confidence            9999999999875

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=100.00  E-value=6.6e-40  Score=273.07  Aligned_cols=240  Identities=27%  Similarity=0.367  Sum_probs=192.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHH----HHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQV----KALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~----~~~~~~~~~~   88 (264)
                      ++++||||++|||++++++|+++|++|+++.|+..+..+.+.+.+.   ..++.++++|++|.+++    +++++++.+.
T Consensus         2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~   81 (267)
T TIGR02685         2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA   81 (267)
T ss_pred             CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence            6899999999999999999999999988877765544444433332   23567899999998755    5666666678


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCH-----------HHHHHHHhhHHHHHHHHHHHHHHHHHcC-----CCCcEEEEec
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDF-----------SAFDRLFAINVRGMAACVKHAARVMVEG-----GVRGSIVCTA  152 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~~~~iv~is  152 (264)
                      ++++|+||||||...+.  ++.+.+.           ++|.+++++|+.+++.+++.++|+|+..     +..++|++++
T Consensus        82 ~g~iD~lv~nAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~  159 (267)
T TIGR02685        82 FGRCDVLVNNASAFYPT--PLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLC  159 (267)
T ss_pred             cCCceEEEECCccCCCC--cccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEeh
Confidence            89999999999986543  3333333           3689999999999999999999999643     1246899999


Q ss_pred             CCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCCh
Q 041914          153 SVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRA  232 (264)
Q Consensus       153 s~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (264)
                      |..+..+.+++..|++||+|+++|+++++.|+++.||+|++|+||+++|+...     .. ...+.+....|...+..+|
T Consensus       160 s~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~  233 (267)
T TIGR02685       160 DAMTDQPLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM-----PF-EVQEDYRRKVPLGQREASA  233 (267)
T ss_pred             hhhccCCCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc-----ch-hHHHHHHHhCCCCcCCCCH
Confidence            99999888999999999999999999999999999999999999999876321     11 1112222334553577899


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +|+++.++||+++..++++|+.+.+|||+.+
T Consensus       234 ~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~  264 (267)
T TIGR02685       234 EQIADVVIFLVSPKAKYITGTCIKVDGGLSL  264 (267)
T ss_pred             HHHHHHHHHHhCcccCCcccceEEECCceec
Confidence            9999999999999899999999999999876

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.5e-39  Score=269.23  Aligned_cols=239  Identities=23%  Similarity=0.322  Sum_probs=203.1

Q ss_pred             cCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCc-----------hhhHHHHHhhhC--CCcEEEEEecCCCHH
Q 041914           12 KLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQ-----------DELGRQVATSIG--VGKCHYVHCDVTNEC   76 (264)
Q Consensus        12 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~~--~~~~~~~~~D~s~~~   76 (264)
                      ++++|++|||||++  |||.+++++|+++|++|+++.|+.           .+... +.....  ..+++++++|+++.+
T Consensus         2 ~l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~   80 (256)
T PRK12748          2 PLMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVL-LKEEIESYGVRCEHMEIDLSQPY   80 (256)
T ss_pred             CCCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHH-HHHHHHhcCCeEEEEECCCCCHH
Confidence            46789999999994  999999999999999988888762           11111 222221  246889999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ++.++++++.+.++++|++|||+|+....  ++.+.+++++++.+++|+.+++.+++.+++.|.++. .++||++||..+
T Consensus        81 ~~~~~~~~~~~~~g~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~  157 (256)
T PRK12748         81 APNRVFYAVSERLGDPSILINNAAYSTHT--RLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKA-GGRIINLTSGQS  157 (256)
T ss_pred             HHHHHHHHHHHhCCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CeEEEEECCccc
Confidence            99999999999999999999999986554  788889999999999999999999999999997765 689999999999


Q ss_pred             CCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          157 SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       157 ~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                      ..+.++...|+++|++++++++.++.|+...||++++++||+++|++...       .....+....+. .++.+|+|++
T Consensus       158 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~-------~~~~~~~~~~~~-~~~~~~~~~a  229 (256)
T PRK12748        158 LGPMPDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE-------ELKHHLVPKFPQ-GRVGEPVDAA  229 (256)
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh-------hHHHhhhccCCC-CCCcCHHHHH
Confidence            88888999999999999999999999999999999999999999986431       112222233344 6778999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +.+.+|+++...+++|+++.+|||+.
T Consensus       230 ~~~~~l~~~~~~~~~g~~~~~d~g~~  255 (256)
T PRK12748        230 RLIAFLVSEEAKWITGQVIHSEGGFS  255 (256)
T ss_pred             HHHHHHhCcccccccCCEEEecCCcc
Confidence            99999999988999999999999973

>PRK06057 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-39  Score=269.49  Aligned_cols=244  Identities=36%  Similarity=0.574  Sum_probs=204.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+++|+++||||++|||.+++++|+++|++|+++.|+..+..+ ..+...   ..++++|++++++++++++++.+.+++
T Consensus         4 ~~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~-~~~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~   79 (255)
T PRK06057          4 RLAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKA-AADEVG---GLFVPTDVTDEDAVNALFDTAAETYGS   79 (255)
T ss_pred             cCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHH-HHHHcC---CcEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            3789999999999999999999999999998888886554332 222222   257899999999999999999999899


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-CCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sK  170 (264)
                      +|++|||+|...+...++.+.+.+.|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+. +++..|+++|
T Consensus        80 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~g~iv~~sS~~~~~g~~~~~~~Y~~sK  158 (255)
T PRK06057         80 VDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQG-KGSIINTASFVAVMGSATSQISYTASK  158 (255)
T ss_pred             CCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhC-CcEEEEEcchhhccCCCCCCcchHHHH
Confidence            9999999998654334677889999999999999999999999999998766 6899999998776655 4778899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.+++.++.++.++||++++|+||+++|++.........+..... ....|. +++.+|+|+++++.+|+++...++
T Consensus       159 aal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~  236 (255)
T PRK06057        159 GGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARR-LVHVPM-GRFAEPEEIAAAVAFLASDDASFI  236 (255)
T ss_pred             HHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHH-HhcCCC-CCCcCHHHHHHHHHHHhCccccCc
Confidence            999999999999999999999999999999998765433222222222 223455 688999999999999999999999


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                      +|+.|.+|||+.
T Consensus       237 ~g~~~~~~~g~~  248 (255)
T PRK06057        237 TASTFLVDGGIS  248 (255)
T ss_pred             cCcEEEECCCee
Confidence            999999999975

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=1.4e-39  Score=268.06  Aligned_cols=243  Identities=27%  Similarity=0.512  Sum_probs=204.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|+++||||+++||.+++++|+++|++|+++.++..+..+...+.+.  ..++.++++|+++++++.++++++.+.+
T Consensus         3 ~~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (247)
T PRK12935          3 QLNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHF   82 (247)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999987766654444333333332  2368899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|.....  .+.+.+.+.+++.+++|+.+++.+++.++|.|.+++ .+++|++||..+..+.+++..|+++
T Consensus        83 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  159 (247)
T PRK12935         83 GKVDILVNNAGITRDR--TFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAE-EGRIISISSIIGQAGGFGQTNYSAA  159 (247)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchhhcCCCCCCcchHHH
Confidence            9999999999987553  677889999999999999999999999999998766 6899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++++++.++.++.+.||+++.++||+++|++....   . +..........+. +++..|||+++++++++.+ ..+
T Consensus       160 K~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~edva~~~~~~~~~-~~~  233 (247)
T PRK12935        160 KAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEV---P-EEVRQKIVAKIPK-KRFGQADEIAKGVVYLCRD-GAY  233 (247)
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhc---c-HHHHHHHHHhCCC-CCCcCHHHHHHHHHHHcCc-ccC
Confidence            99999999999999999999999999999999876532   1 2222222223343 6789999999999999965 458


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.+.+|||+++
T Consensus       234 ~~g~~~~i~~g~~~  247 (247)
T PRK12935        234 ITGQQLNINGGLYM  247 (247)
T ss_pred             ccCCEEEeCCCccC
Confidence            99999999999864

>PRK05872 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-40  Score=275.78  Aligned_cols=236  Identities=25%  Similarity=0.352  Sum_probs=200.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.++++|++|||||++|||++++++|+++|++|++++|+.++..+ +.+.+. ...+..+++|++|.++++++++++.+.
T Consensus         4 ~~~l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~-~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   82 (296)
T PRK05872          4 MTSLAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAA-LAAELGGDDRVLTVVADVTDLAAMQAAAEEAVER   82 (296)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999998888887665433 333333 345777889999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|+....  ++.+.+.++|++++++|+.+++++++.++|.|.++  .|+||++||..+..+.++...|++
T Consensus        83 ~g~id~vI~nAG~~~~~--~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  158 (296)
T PRK05872         83 FGGIDVVVANAGIASGG--SVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIER--RGYVLQVSSLAAFAAAPGMAAYCA  158 (296)
T ss_pred             cCCCCEEEECCCcCCCc--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc--CCEEEEEeCHhhcCCCCCchHHHH
Confidence            99999999999987644  78899999999999999999999999999999774  479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC--CCCCCCCCChHHHHHHHHHHhCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ--TPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ||+++++|+++++.|++++||+|++++||+++|++.......  ......+...  .|. ++..+|||+++.+++++++.
T Consensus       159 sKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~--~~~~~~~~~~~~~p~-~~~~~~~~va~~i~~~~~~~  235 (296)
T PRK05872        159 SKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADAD--LPAFRELRARLPWPL-RRTTSVEKCAAAFVDGIERR  235 (296)
T ss_pred             HHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhcccc--chhHHHHHhhCCCcc-cCCCCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999987643211  1111112111  234 67889999999999999988


Q ss_pred             CCCeecc
Q 041914          247 SEFVTGH  253 (264)
Q Consensus       247 ~~~~~G~  253 (264)
                      ..+++|.
T Consensus       236 ~~~i~~~  242 (296)
T PRK05872        236 ARRVYAP  242 (296)
T ss_pred             CCEEEch
Confidence            8888775

>PRK08278 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.7e-40  Score=272.88  Aligned_cols=236  Identities=25%  Similarity=0.286  Sum_probs=199.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh------HHHHHhhh--CCCcEEEEEecCCCHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL------GRQVATSI--GVGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      +++++|++|||||++|||.+++++|+++|++|++++|+.++.      .+...+.+  ...++.++++|+++++++.+++
T Consensus         2 ~~~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~   81 (273)
T PRK08278          2 MSLSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAV   81 (273)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHH
Confidence            457889999999999999999999999999998888875431      12222222  1246889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--  160 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--  160 (264)
                      +++.+.++++|+||||+|.....  ++.+.+.++|++++++|+.+++.+++.++|+|++++ .++|++++|..+..+.  
T Consensus        82 ~~~~~~~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~  158 (273)
T PRK08278         82 AKAVERFGGIDICVNNASAINLT--GTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSE-NPHILTLSPPLNLDPKWF  158 (273)
T ss_pred             HHHHHHhCCCCEEEECCCCcCCC--CcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcC-CCEEEEECCchhcccccc
Confidence            99999999999999999986554  678889999999999999999999999999998876 6899999999888776  


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCC-cccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH-GLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      +++..|++||++++.|++.++.|++++||+||+|+|| .++|++......           ...+. ++..+|+++++.+
T Consensus       159 ~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~~~~-----------~~~~~-~~~~~p~~va~~~  226 (273)
T PRK08278        159 APHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRNLLG-----------GDEAM-RRSRTPEIMADAA  226 (273)
T ss_pred             CCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHhccc-----------ccccc-cccCCHHHHHHHH
Confidence            8889999999999999999999999999999999999 588876543211           11122 5678999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++|+++...+++|+.+ +|++..
T Consensus       227 ~~l~~~~~~~~~G~~~-~~~~~~  248 (273)
T PRK08278        227 YEILSRPAREFTGNFL-IDEEVL  248 (273)
T ss_pred             HHHhcCccccceeEEE-eccchh
Confidence            9999988889999877 687753

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=100.00  E-value=2.4e-39  Score=266.05  Aligned_cols=240  Identities=26%  Similarity=0.414  Sum_probs=207.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++||||++++||++++++|+++|++|+++.|+..+..+.......  ..++.++++|++|.+++.++++++.++++++|
T Consensus         3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id   82 (245)
T PRK12824          3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD   82 (245)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999988888875433333222221  24688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|.....  ++.+.+.++|++.+++|+.+++++++.++|.|++.+ .++||++||..+..+.++...|+++|+++
T Consensus        83 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~Y~~sK~a~  159 (245)
T PRK12824         83 ILVNNAGITRDS--VFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQG-YGRIINISSVNGLKGQFGQTNYSAAKAGM  159 (245)
T ss_pred             EEEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC-CeEEEEECChhhccCCCCChHHHHHHHHH
Confidence            999999987544  678889999999999999999999999999998766 78999999999999989999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      ++|++.++.++++.||+++++.||++.|++.....    +.....+....|. ++..+++|+++++.+|+++...+++|+
T Consensus       160 ~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~G~  234 (245)
T PRK12824        160 IGFTKALASEGARYGITVNCIAPGYIATPMVEQMG----PEVLQSIVNQIPM-KRLGTPEEIAAAVAFLVSEAAGFITGE  234 (245)
T ss_pred             HHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcC----HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccccCccCc
Confidence            99999999999999999999999999999865432    2333333444555 678899999999999998888899999


Q ss_pred             EEEecCeeec
Q 041914          254 DLVVDGGFLI  263 (264)
Q Consensus       254 ~i~~dgG~~~  263 (264)
                      .+.+|||+.|
T Consensus       235 ~~~~~~g~~~  244 (245)
T PRK12824        235 TISINGGLYM  244 (245)
T ss_pred             EEEECCCeec
Confidence            9999999987

>PRK07814 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-39  Score=268.12  Aligned_cols=246  Identities=27%  Similarity=0.410  Sum_probs=208.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++.+|+++++++.++++++.+.+
T Consensus         6 ~~~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   85 (263)
T PRK07814          6 FRLDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF   85 (263)
T ss_pred             ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999998888876554333222221 2468889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||.....  ++.+.+.++|++.+++|+.+++.+++.+.|.|.+....+++|++||..+..+.++...|+++
T Consensus        86 ~~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  163 (263)
T PRK07814         86 GRLDIVVNNVGGTMPN--PLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTA  163 (263)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHH
Confidence            9999999999986543  67788999999999999999999999999999874326899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.+++.++.|+.+ +|++|+|+||++.|++.....  ........+....|. .+..+|||+++.++|++++...+
T Consensus       164 K~a~~~~~~~~~~e~~~-~i~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  239 (263)
T PRK07814        164 KAALAHYTRLAALDLCP-RIRVNAIAPGSILTSALEVVA--ANDELRAPMEKATPL-RRLGDPEDIAAAAVYLASPAGSY  239 (263)
T ss_pred             HHHHHHHHHHHHHHHCC-CceEEEEEeCCCcCchhhhcc--CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999987 699999999999999764321  122333333334455 66789999999999999988899


Q ss_pred             eeccEEEecCeee
Q 041914          250 VTGHDLVVDGGFL  262 (264)
Q Consensus       250 ~~G~~i~~dgG~~  262 (264)
                      ++|+.+.+|||+.
T Consensus       240 ~~g~~~~~~~~~~  252 (263)
T PRK07814        240 LTGKTLEVDGGLT  252 (263)
T ss_pred             cCCCEEEECCCcc
Confidence            9999999999965

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-39  Score=268.85  Aligned_cols=250  Identities=31%  Similarity=0.423  Sum_probs=208.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.++++|++|||||+++||.+++++|+++|++|+++.|+.++..+...+... ..++.++++|++|.++++++++++.+.
T Consensus         2 ~~~~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   81 (262)
T PRK13394          2 MSNLNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAER   81 (262)
T ss_pred             cccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999988888876554433333222 236788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHH-HcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVM-VEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~-~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++++|+||||+|.....  ++.+.+.+.|++.+++|+.+++.+++.+++.| ++.+ .++||++||..+..+.++...|+
T Consensus        82 ~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~y~  158 (262)
T PRK13394         82 FGSVDILVSNAGIQIVN--PIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDR-GGVVIYMGSVHSHEASPLKSAYV  158 (262)
T ss_pred             cCCCCEEEECCccCCCC--chhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcC-CcEEEEEcchhhcCCCCCCcccH
Confidence            99999999999987544  67778899999999999999999999999999 6555 68999999999988888889999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-------ChHH-HHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-------PADE-VEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      ++|++++.+++.++.++++.+|+++++.||++.|++.......       ..++ ....+....+. +++++++|+++++
T Consensus       159 ~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~  237 (262)
T PRK13394        159 TAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVD-GVFTTVEDVAQTV  237 (262)
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCC-CCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999975432110       1111 11223333444 7899999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeeec
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++++.....++|+.|.+|||+.+
T Consensus       238 ~~l~~~~~~~~~g~~~~~~~g~~~  261 (262)
T PRK13394        238 LFLSSFPSAALTGQSFVVSHGWFM  261 (262)
T ss_pred             HHHcCccccCCcCCEEeeCCceec
Confidence            999988778899999999999865

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=100.00  E-value=3.7e-39  Score=267.39  Aligned_cols=245  Identities=32%  Similarity=0.506  Sum_probs=206.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||+++||.+++++|+++|++|+++.|+.++......+... ..++.++++|++|+++++++++++.+.+
T Consensus         8 ~~~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~   87 (259)
T PRK08213          8 FDLSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF   87 (259)
T ss_pred             hCcCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999988888876544333222222 2367889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHH-HHcCCCCcEEEEecCCCCCCCCCC----Cc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV-MVEGGVRGSIVCTASVAGSCGGKR----RT  164 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~-~~~~~~~~~iv~iss~~~~~~~~~----~~  164 (264)
                      +++|++|||+|.....  +..+.+.+.|++.+++|+.+++.+++++.|+ |.+++ .+++|++||..+..+.++    ..
T Consensus        88 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~-~~~~v~~sS~~~~~~~~~~~~~~~  164 (259)
T PRK08213         88 GHVDILVNNAGATWGA--PAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRG-YGRIINVASVAGLGGNPPEVMDTI  164 (259)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcC-CeEEEEECChhhccCCCccccCcc
Confidence            9999999999986543  6777899999999999999999999999998 76655 689999999877665543    48


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+++|++++.+++.++.++.++||++++++||+++|++.....    +...+.+....|. .++.+|+|+++.+.+|++
T Consensus       165 ~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~  239 (259)
T PRK08213        165 AYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTL----ERLGEDLLAHTPL-GRLGDDEDLKGAALLLAS  239 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhh----HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            89999999999999999999999999999999999999764331    2223334445565 678899999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|+.+.+|||+++
T Consensus       240 ~~~~~~~G~~~~~~~~~~~  258 (259)
T PRK08213        240 DASKHITGQILAVDGGVSA  258 (259)
T ss_pred             ccccCccCCEEEECCCeec
Confidence            9999999999999999865

>PRK06484 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.9e-39  Score=294.22  Aligned_cols=247  Identities=33%  Similarity=0.521  Sum_probs=208.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +.++|++|||||++|||++++++|+++|++|+++.|+.++..+.. +... .++.++++|++|+++++++++++.+++++
T Consensus         2 ~~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (520)
T PRK06484          2 KAQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERA-DSLG-PDHHALAMDVSDEAQIREGFEQLHREFGR   79 (520)
T ss_pred             CCCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhC-CceeEEEeccCCHHHHHHHHHHHHHHhCC
Confidence            357899999999999999999999999999888888766554433 3222 35778999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+..+...++.+.+.++|++++++|+.+++.++++++|+|.+++..++||++||..+..+.+.+..|+++|+
T Consensus        80 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKa  159 (520)
T PRK06484         80 IDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKA  159 (520)
T ss_pred             CCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHH
Confidence            99999999985433346778999999999999999999999999999987652349999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      ++++|++.++.|+.+.||+|++|+||+++|++........... ........|. +++.+|+|+++.+.+|+++...+++
T Consensus       160 al~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~va~~v~~l~~~~~~~~~  237 (520)
T PRK06484        160 AVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLD-PSAVRSRIPL-GRLGRPEEIAEAVFFLASDQASYIT  237 (520)
T ss_pred             HHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhh-hHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCcc
Confidence            9999999999999999999999999999999875432111101 1112223444 6788999999999999999899999


Q ss_pred             ccEEEecCeee
Q 041914          252 GHDLVVDGGFL  262 (264)
Q Consensus       252 G~~i~~dgG~~  262 (264)
                      |+.+.+|||+.
T Consensus       238 G~~~~~~gg~~  248 (520)
T PRK06484        238 GSTLVVDGGWT  248 (520)
T ss_pred             CceEEecCCee
Confidence            99999999975

>PRK09186 flagellin modification protein A; Provisional

Probab=100.00  E-value=3e-39  Score=267.35  Aligned_cols=241  Identities=21%  Similarity=0.365  Sum_probs=198.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++|++|||||++|||+++++.|+++|++|+++.|+.+...+...+..   ....+.++++|++|++++.++++++.+.+
T Consensus         2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   81 (256)
T PRK09186          2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY   81 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence            568999999999999999999999999998888877655433333221   12346678999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCC-CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--------
Q 041914           90 GQLDIMFSNAGILSSS-DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--------  160 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--------  160 (264)
                      +++|++||||+..... ..++.+.+.+.|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.        
T Consensus        82 ~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~  160 (256)
T PRK09186         82 GKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQG-GGNLVNISSIYGVVAPKFEIYEGT  160 (256)
T ss_pred             CCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcC-CceEEEEechhhhccccchhcccc
Confidence            9999999999865321 23677899999999999999999999999999998876 6899999998765432        


Q ss_pred             --CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          161 --KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       161 --~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                        .....|+++|+++++|++.++.|+.+.||+++.++||.+.++..        ......+....+. .++++|+|+|+.
T Consensus       161 ~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~--------~~~~~~~~~~~~~-~~~~~~~dva~~  231 (256)
T PRK09186        161 SMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP--------EAFLNAYKKCCNG-KGMLDPDDICGT  231 (256)
T ss_pred             ccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC--------HHHHHHHHhcCCc-cCCCCHHHhhhh
Confidence              12346999999999999999999999999999999999987642        1122222233343 678899999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeec
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++++++...+++|+.+.+|||+++
T Consensus       232 ~~~l~~~~~~~~~g~~~~~~~g~~~  256 (256)
T PRK09186        232 LVFLLSDQSKYITGQNIIVDDGFSL  256 (256)
T ss_pred             HhheeccccccccCceEEecCCccC
Confidence            9999998899999999999999864

>PRK07069 short chain dehydrogenase; Validated

Probab=100.00  E-value=5.8e-39  Score=264.77  Aligned_cols=242  Identities=31%  Similarity=0.443  Sum_probs=204.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++||||++|||+++++.|+++|++|+++.|+..+..+.+.+.+.    ...+..+++|++|.++++++++++.+.++++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            79999999999999999999999988888873443333333322    12456789999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|.....  ++.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+++..|+++|+++
T Consensus        82 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~  158 (251)
T PRK07069         82 VLVNNAGVGSFG--AIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQ-PASIVNISSVAAFKAEPDYTAYNASKAAV  158 (251)
T ss_pred             EEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEecChhhccCCCCCchhHHHHHHH
Confidence            999999987654  778889999999999999999999999999998876 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCC--ceEEEeeCCcccCcccccccC-CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          174 IGLVRSASVQLGVHG--IRVNCVSPHGLATPLTCHAYG-MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       174 ~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +.|+++++.|+++++  |++++|+||+++|++...... ...++....+....|. +++.+|+|+++.+++|+++...++
T Consensus       159 ~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~~  237 (251)
T PRK07069        159 ASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPL-GRLGEPDDVAHAVLYLASDESRFV  237 (251)
T ss_pred             HHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCC-CCCcCHHHHHHHHHHHcCccccCc
Confidence            999999999997765  999999999999998754321 1222233333344555 678899999999999999889999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.+.+|||+..
T Consensus       238 ~g~~i~~~~g~~~  250 (251)
T PRK07069        238 TGAELVIDGGICA  250 (251)
T ss_pred             cCCEEEECCCeec
Confidence            9999999999763

>PRK07774 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.8e-39  Score=263.36  Aligned_cols=246  Identities=28%  Similarity=0.448  Sum_probs=205.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      |+++++|++|||||+++||++++++|+++|++|+++.|..+...+ +.+.. . ..++.++.+|++|.++++++++++.+
T Consensus         1 ~~~~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   79 (250)
T PRK07774          1 MGRFDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAER-VAKQIVADGGTAIAVQVDVSDPDSAKAMADATVS   79 (250)
T ss_pred             CcccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            356789999999999999999999999999998888887654433 32222 2 23578899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCC-CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           88 NYGQLDIMFSNAGILSSS-DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      .++++|+||||+|+.... ..++.+.++++|++.+++|+.+++.++++++|.|.+.+ .++||++||..+..   +...|
T Consensus        80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~---~~~~Y  155 (250)
T PRK07774         80 AFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRG-GGAIVNQSSTAAWL---YSNFY  155 (250)
T ss_pred             HhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC-CcEEEEEecccccC---Ccccc
Confidence            999999999999986532 23677789999999999999999999999999998766 68999999988764   45679


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||++++.+++.++.++...||++++++||+++|++....   ..+..........|. .+..+|+|+++.+++++++.
T Consensus       156 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~~  231 (250)
T PRK07774        156 GLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTV---TPKEFVADMVKGIPL-SRMGTPEDLVGMCLFLLSDE  231 (250)
T ss_pred             HHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCcccccc---CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999999999986543   122333333344454 56789999999999999876


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ....+|+++++|+|.+|+
T Consensus       232 ~~~~~g~~~~v~~g~~~~  249 (250)
T PRK07774        232 ASWITGQIFNVDGGQIIR  249 (250)
T ss_pred             hhCcCCCEEEECCCeecc
Confidence            677899999999999885

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=4.3e-39  Score=260.14  Aligned_cols=219  Identities=28%  Similarity=0.403  Sum_probs=187.4

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ...+.+|++||||||++|||+++|.+|+++|+.+++..-+.+...+...+....++++.+.||+++.+++.+.++++++.
T Consensus        32 ~~k~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e  111 (300)
T KOG1201|consen   32 PLKSVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKE  111 (300)
T ss_pred             chhhccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHh
Confidence            34568999999999999999999999999999855655555544444333332258999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      .|++|+||||||+....  ++.+.+.+++++.+++|+.|+|+++|+|+|.|.+.. +|+||.++|+.|..+.++...|++
T Consensus       112 ~G~V~ILVNNAGI~~~~--~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~-~GHIV~IaS~aG~~g~~gl~~Yca  188 (300)
T KOG1201|consen  112 VGDVDILVNNAGIVTGK--KLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENN-NGHIVTIASVAGLFGPAGLADYCA  188 (300)
T ss_pred             cCCceEEEeccccccCC--CccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcC-CceEEEehhhhcccCCccchhhhh
Confidence            99999999999998776  899999999999999999999999999999999988 899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhC---cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          169 SKHAVIGLVRSASVQLG---VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       169 sK~al~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ||+|+.+|.+++..|+.   .+||+...++|+.++|.|+....  +       +...    --.++|+.+|+.++.-+
T Consensus       189 SK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgmf~~~~--~-------~~~l----~P~L~p~~va~~Iv~ai  253 (300)
T KOG1201|consen  189 SKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGMFDGAT--P-------FPTL----APLLEPEYVAKRIVEAI  253 (300)
T ss_pred             hHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccccCCCC--C-------Cccc----cCCCCHHHHHHHHHHHH
Confidence            99999999999999985   45699999999999999986410  0       1111    23468889998887755

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=100.00  E-value=1.8e-39  Score=268.77  Aligned_cols=239  Identities=19%  Similarity=0.207  Sum_probs=192.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHH----cCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFAD----HGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++|||||++|||++++++|++    .|++|+++.|+.+...+...+...   ..++.++++|++|.++++++++++.+.+
T Consensus         2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~   81 (256)
T TIGR01500         2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP   81 (256)
T ss_pred             EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence            689999999999999999997    799988888876654433322222   2368899999999999999999998877


Q ss_pred             CC----ccEEEEcCCCCCCCCCCccCC-CHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCCCCCC
Q 041914           90 GQ----LDIMFSNAGILSSSDQTVLDL-DFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        90 ~~----id~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~~~~~  163 (264)
                      +.    .|+||||||..........+. +.++|++.+++|+.+++.+++.++|.|+++. ..++||++||..+..+.+++
T Consensus        82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~  161 (256)
T TIGR01500        82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGW  161 (256)
T ss_pred             ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCc
Confidence            64    369999999764322223333 5789999999999999999999999998652 24799999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-PADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|+|....... ..++....+....|. +++.+|||+|+.+++|
T Consensus       162 ~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~eva~~~~~l  240 (256)
T TIGR01500       162 ALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK-GKLVDPKVSAQKLLSL  240 (256)
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc-CCCCCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999987533111 111222233334455 7889999999999999


Q ss_pred             hCCCCCCeeccEEEe
Q 041914          243 ACRDSEFVTGHDLVV  257 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~  257 (264)
                      ++ ..+++||++++.
T Consensus       241 ~~-~~~~~~G~~~~~  254 (256)
T TIGR01500       241 LE-KDKFKSGAHVDY  254 (256)
T ss_pred             Hh-cCCcCCcceeec
Confidence            96 578999999875

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK05875 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.7e-38  Score=265.83  Aligned_cols=247  Identities=30%  Similarity=0.428  Sum_probs=209.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++++|++||||++++||.+++++|+++|++|+++.|+.++......+...   ..++.++++|++|++++.++++++.++
T Consensus         4 ~~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   83 (276)
T PRK05875          4 SFQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAW   83 (276)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            47789999999999999999999999999988888876554333222211   246888999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|..... .++.+.+.++|++.+++|+.+++.+++++++.|.+++ .++|+++||..+..+.++...|++
T Consensus        84 ~~~~d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~~sS~~~~~~~~~~~~Y~~  161 (276)
T PRK05875         84 HGRLHGVVHCAGGSETI-GPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGG-GGSFVGISSIAASNTHRWFGAYGV  161 (276)
T ss_pred             cCCCCEEEECCCcccCC-CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhcCCCCCCcchHH
Confidence            99999999999976432 3677789999999999999999999999999998766 689999999999988888999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.+++.++.++...+|++++|+||+++|++......  .+.....+....|. .++.+|+|+++++.+|+++...
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  238 (276)
T PRK05875        162 TKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITE--SPELSADYRACTPL-PRVGEVEDVANLAMFLLSDAAS  238 (276)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEecCccCCcccccccc--CHHHHHHHHcCCCC-CCCcCHHHHHHHHHHHcCchhc
Confidence            99999999999999999999999999999999998754321  12222223334455 7788999999999999998888


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      .++|+++.+|||+.+
T Consensus       239 ~~~g~~~~~~~g~~~  253 (276)
T PRK05875        239 WITGQVINVDGGHML  253 (276)
T ss_pred             CcCCCEEEECCCeec
Confidence            999999999999876

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.4e-38  Score=263.33  Aligned_cols=244  Identities=28%  Similarity=0.357  Sum_probs=205.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|++|||||+++||.+++++|+++|++|+++.|+..+..+...+...  ..++.++++|+++++++.++++++.+.++++
T Consensus         2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (256)
T PRK12745          2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI   81 (256)
T ss_pred             CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence            37999999999999999999999999998888876544333333322  2468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-----CcEEEEecCCCCCCCCCCCchhh
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-----RGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      |++|||+|.......++.+.+.+.|++.+++|+.+++.+++.+++.|.++..     .+++|++||..+..+.++...|+
T Consensus        82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~  161 (256)
T PRK12745         82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYC  161 (256)
T ss_pred             CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccH
Confidence            9999999987554457788899999999999999999999999999987541     35799999999998888999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC-CCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE-PQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      .+|+++++|++.++.++.++||++++++||++.|++.....    +.....+. ...|. .++.+|+|+++++.+++++.
T Consensus       162 ~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~d~a~~i~~l~~~~  236 (256)
T PRK12745        162 ISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVT----AKYDALIAKGLVPM-PRWGEPEDVARAVAALASGD  236 (256)
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccc----hhHHhhhhhcCCCc-CCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999998764321    11122221 13454 67889999999999999888


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+.|++|||+++
T Consensus       237 ~~~~~G~~~~i~gg~~~  253 (256)
T PRK12745        237 LPYSTGQAIHVDGGLSI  253 (256)
T ss_pred             ccccCCCEEEECCCeec
Confidence            88999999999999876

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-38  Score=262.30  Aligned_cols=241  Identities=34%  Similarity=0.480  Sum_probs=199.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++|||||++|||.++++.|+++|++|+++.++..+..+...+.+.  ..++.+++||+++.++++++++++.+.++++|
T Consensus         3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   82 (248)
T PRK06947          3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD   82 (248)
T ss_pred             cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence            7899999999999999999999999987776555444333333322  24688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCC-CchhhchH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKR-RTDYHMSK  170 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~-~~~y~~sK  170 (264)
                      ++|||+|..... .++.+.+.++|++.+++|+.+++.+++.+++.|..++  ..++||++||..+..+.+. +..|+++|
T Consensus        83 ~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK  161 (248)
T PRK06947         83 ALVNNAGIVAPS-MPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSK  161 (248)
T ss_pred             EEEECCccCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhH
Confidence            999999987543 3677889999999999999999999999999987542  1468999999988777664 56899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +++++|++.++.++++.||+|+.|+||+++|++.... ..  ++.........|. ++..+|||+++.+++++++..+++
T Consensus       162 ~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~-~~--~~~~~~~~~~~~~-~~~~~~e~va~~~~~l~~~~~~~~  237 (248)
T PRK06947        162 GAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASG-GQ--PGRAARLGAQTPL-GRAGEADEVAETIVWLLSDAASYV  237 (248)
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeccCccccccccc-CC--HHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCccccCc
Confidence            9999999999999999999999999999999986431 11  1222223334455 678899999999999999888999


Q ss_pred             eccEEEecCee
Q 041914          251 TGHDLVVDGGF  261 (264)
Q Consensus       251 ~G~~i~~dgG~  261 (264)
                      +|++|.+|||.
T Consensus       238 ~G~~~~~~gg~  248 (248)
T PRK06947        238 TGALLDVGGGR  248 (248)
T ss_pred             CCceEeeCCCC
Confidence            99999999983

>PRK08862 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-39  Score=260.12  Aligned_cols=222  Identities=18%  Similarity=0.184  Sum_probs=184.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++|+++||||++|||++++++|+++|++|+++.|+.++..+...+... ..++..+.+|++|+++++++++++.++++
T Consensus         2 ~~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (227)
T PRK08862          2 DIKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN   81 (227)
T ss_pred             CCCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            57899999999999999999999999999988888876655443333222 24678899999999999999999999998


Q ss_pred             -CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           91 -QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        91 -~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                       ++|++|||+|..... .++.+.+.++|.+.+++|+.+++.+++.++|+|++++.+|+||++||..+.   +++..|+++
T Consensus        82 ~~iD~li~nag~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~---~~~~~Y~as  157 (227)
T PRK08862         82 RAPDVLVNNWTSSPLP-SLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH---QDLTGVESS  157 (227)
T ss_pred             CCCCEEEECCccCCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC---CCcchhHHH
Confidence             999999999865432 378889999999999999999999999999999875436899999997643   567889999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+.+|+++++.|++++||+||+|+||+++|+...     ..+.+.+.             .||++.++.||++  +.+
T Consensus       158 Kaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~-----~~~~~~~~-------------~~~~~~~~~~l~~--~~~  217 (227)
T PRK08862        158 NALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGEL-----DAVHWAEI-------------QDELIRNTEYIVA--NEY  217 (227)
T ss_pred             HHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCcc-----CHHHHHHH-------------HHHHHhheeEEEe--ccc
Confidence            999999999999999999999999999999998321     11111111             1799999999996  779


Q ss_pred             eeccEEEe
Q 041914          250 VTGHDLVV  257 (264)
Q Consensus       250 ~~G~~i~~  257 (264)
                      +||+.|..
T Consensus       218 ~tg~~~~~  225 (227)
T PRK08862        218 FSGRVVEA  225 (227)
T ss_pred             ccceEEee
Confidence            99998763

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=100.00  E-value=1.9e-38  Score=260.22  Aligned_cols=240  Identities=26%  Similarity=0.409  Sum_probs=205.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++|||||+++||++++++|+++|++|+++.|+..+..+......  ...++.++.+|++|+++++++++++.+.++++|
T Consensus         1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (242)
T TIGR01829         1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID   80 (242)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence            689999999999999999999999998888874433333222222  124688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|...+.  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+++..|+++|+++
T Consensus        81 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~sk~a~  157 (242)
T TIGR01829        81 VLVNNAGITRDA--TFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERG-WGRIINISSVNGQKGQFGQTNYSAAKAGM  157 (242)
T ss_pred             EEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCcchhHHHHHHH
Confidence            999999987554  677889999999999999999999999999998876 68999999999998889999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      +.|++.++.++.+.||+++++.||++.|++.....    +.....+....|. .++.+|+|+++.+.+|++++..+++|+
T Consensus       158 ~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~G~  232 (242)
T TIGR01829       158 IGFTKALAQEGATKGVTVNTISPGYIATDMVMAMR----EDVLNSIVAQIPV-GRLGRPEEIAAAVAFLASEEAGYITGA  232 (242)
T ss_pred             HHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccc----hHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCccCC
Confidence            99999999999999999999999999999865321    2223333344565 678899999999999999888899999


Q ss_pred             EEEecCeeec
Q 041914          254 DLVVDGGFLI  263 (264)
Q Consensus       254 ~i~~dgG~~~  263 (264)
                      +|.+|||+++
T Consensus       233 ~~~~~gg~~~  242 (242)
T TIGR01829       233 TLSINGGLYM  242 (242)
T ss_pred             EEEecCCccC
Confidence            9999999875

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>PRK05884 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.8e-39  Score=260.40  Aligned_cols=215  Identities=20%  Similarity=0.283  Sum_probs=178.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++||||++|||++++++|+++|++|+++.|+.++..+ +.+..   .+.++++|++|+++++++++++.+   ++|++|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~-~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~---~id~lv   74 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEV-AAKEL---DVDAIVCDNTDPASLEEARGLFPH---HLDTIV   74 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhc---cCcEEecCCCCHHHHHHHHHHHhh---cCcEEE
Confidence            58999999999999999999999998888887655433 22222   356789999999999999887753   699999


Q ss_pred             EcCCCCCCC----CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           97 SNAGILSSS----DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        97 ~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      ||+|.....    ..++.+ +.++|++++++|+.+++++++.++|.|++   .|+||+++|..    .+....|+++|+|
T Consensus        75 ~~ag~~~~~~~~~~~~~~~-~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~Iv~isS~~----~~~~~~Y~asKaa  146 (223)
T PRK05884         75 NVPAPSWDAGDPRTYSLAD-TANAWRNALDATVLSAVLTVQSVGDHLRS---GGSIISVVPEN----PPAGSAEAAIKAA  146 (223)
T ss_pred             ECCCccccCCCCcccchhc-CHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCeEEEEecCC----CCCccccHHHHHH
Confidence            999853211    113444 57899999999999999999999999965   47999999976    3566889999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      +++|++.++.|++++||+||+|+||+++|++....             ...|.    .+|+|+++.+.||+++...+++|
T Consensus       147 l~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~~-------------~~~p~----~~~~~ia~~~~~l~s~~~~~v~G  209 (223)
T PRK05884        147 LSNWTAGQAAVFGTRGITINAVACGRSVQPGYDGL-------------SRTPP----PVAAEIARLALFLTTPAARHITG  209 (223)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccCchhhhhc-------------cCCCC----CCHHHHHHHHHHHcCchhhccCC
Confidence            99999999999999999999999999999864211             11232    28999999999999999999999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      +++.+|||++.
T Consensus       210 ~~i~vdgg~~~  220 (223)
T PRK05884        210 QTLHVSHGALA  220 (223)
T ss_pred             cEEEeCCCeec
Confidence            99999999874

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-38  Score=262.66  Aligned_cols=247  Identities=32%  Similarity=0.480  Sum_probs=210.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++|++||||++++||.+++++|+++|++|+++.|+.++..+...+... ..+++++.+|++|+++++++++++.+.++.
T Consensus         2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (258)
T PRK12429          2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG   81 (258)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5679999999999999999999999999998998887665443333322 346889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.+++++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|+
T Consensus        82 ~d~vi~~a~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~~~k~  158 (258)
T PRK12429         82 VDILVNNAGIQHVA--PIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQG-GGRIINMASVHGLVGSAGKAAYVSAKH  158 (258)
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcC-CeEEEEEcchhhccCCCCcchhHHHHH
Confidence            99999999987654  677889999999999999999999999999999877 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChH-HHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPAD-EVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      +++.+++.++.++++.||++++++||++.|++......       .+.. .....+....+. +++++++|+|+.+.+++
T Consensus       159 a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~  237 (258)
T PRK12429        159 GLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQ-KRFTTVEEIADYALFLA  237 (258)
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCc-cccCCHHHHHHHHHHHc
Confidence            99999999999999999999999999999987643211       1111 112233333444 67999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .+....++|+++.+|||+.+
T Consensus       238 ~~~~~~~~g~~~~~~~g~~~  257 (258)
T PRK12429        238 SFAAKGVTGQAWVVDGGWTA  257 (258)
T ss_pred             CccccCccCCeEEeCCCEec
Confidence            88788899999999999875

>PRK06198 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=262.27  Aligned_cols=249  Identities=29%  Similarity=0.406  Sum_probs=206.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..+++|+++||||+++||++++++|+++|++ |+++.|+.++......+... ..++.++++|+++++++.++++.+.++
T Consensus         2 ~~~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (260)
T PRK06198          2 GRLDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEA   81 (260)
T ss_pred             CCCCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999 88888775544332222211 236788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.+.|++.+++|+.+++.+++.++|.|.+++..+++|++||..+..+.++...|++
T Consensus        82 ~g~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~  159 (260)
T PRK06198         82 FGRLDALVNAAGLTDRG--TILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCA  159 (260)
T ss_pred             hCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHH
Confidence            99999999999987543  6778899999999999999999999999999987543589999999999888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +|+++++|++.++.|+...||+++.++||++.|++.......   ....+........|. ++..+++|+++.+++|+++
T Consensus       160 sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~  238 (260)
T PRK06198        160 SKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPF-GRLLDPDEVARAVAFLLSD  238 (260)
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCc-cCCcCHHHHHHHHHHHcCh
Confidence            999999999999999999999999999999999874321100   111222222233444 6788999999999999998


Q ss_pred             CCCCeeccEEEecCeee
Q 041914          246 DSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~  262 (264)
                      ...+++|+.|.+|||.+
T Consensus       239 ~~~~~~G~~~~~~~~~~  255 (260)
T PRK06198        239 ESGLMTGSVIDFDQSVW  255 (260)
T ss_pred             hhCCccCceEeECCccc
Confidence            88899999999999853

>PRK07060 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-38  Score=260.93  Aligned_cols=243  Identities=35%  Similarity=0.533  Sum_probs=202.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++++++++++|||++++||+++++.|+++|++|+++.|+.++..+ +.+..   ...++.+|+++.+++.++++.    
T Consensus         3 ~~~~~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-~~~~~---~~~~~~~D~~~~~~v~~~~~~----   74 (245)
T PRK07060          3 MAFDFSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDR-LAGET---GCEPLRLDVGDDAAIRAALAA----   74 (245)
T ss_pred             cccccCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh---CCeEEEecCCCHHHHHHHHHH----
Confidence            4456889999999999999999999999999998888887654432 22221   356789999999988887765    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  +..+.+.++|++.+++|+.+++.+++++++.+.+++..++||++||..+..+.+....|+.
T Consensus        75 ~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~  152 (245)
T PRK07060         75 AGAFDGLVNCAGIASLE--SALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCA  152 (245)
T ss_pred             hCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHH
Confidence            46899999999987544  6677899999999999999999999999999976543479999999999989899999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.+++.++.++.+.||++++++||++.|++......  .......+....|. +++.+++|+++++++++++...
T Consensus       153 sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~  229 (245)
T PRK07060        153 SKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWS--DPQKSGPMLAAIPL-GRFAEVDDVAAPILFLLSDAAS  229 (245)
T ss_pred             HHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhcc--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCcccC
Confidence            99999999999999999999999999999999998643221  11222223333455 7889999999999999998889


Q ss_pred             CeeccEEEecCeeecC
Q 041914          249 FVTGHDLVVDGGFLIR  264 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~~  264 (264)
                      +++|+.|.+|||+++|
T Consensus       230 ~~~G~~~~~~~g~~~~  245 (245)
T PRK07060        230 MVSGVSLPVDGGYTAR  245 (245)
T ss_pred             CccCcEEeECCCccCC
Confidence            9999999999999987

>PRK06123 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3e-38  Score=260.17  Aligned_cols=242  Identities=30%  Similarity=0.410  Sum_probs=200.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||+++||.+++++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|.+++.++++++.++++++
T Consensus         2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   81 (248)
T PRK06123          2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL   81 (248)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence            47999999999999999999999999977776555443333333322  2367889999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCC-Cchhhch
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKR-RTDYHMS  169 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~-~~~y~~s  169 (264)
                      |+||||+|..... .++.+.++++|++.+++|+.+++.+++.+++.|.++.  ..++||++||..+..+.+. +..|+++
T Consensus        82 d~li~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~s  160 (248)
T PRK06123         82 DALVNNAGILEAQ-MRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAAS  160 (248)
T ss_pred             CEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHH
Confidence            9999999986543 2577889999999999999999999999999997642  2478999999988887776 4679999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+++++|++.++.++.++||++++|+||.+.|++....   ..+.....+....|. ++..+|+|+++++++|+++...+
T Consensus       161 Kaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~---~~~~~~~~~~~~~p~-~~~~~~~d~a~~~~~l~~~~~~~  236 (248)
T PRK06123        161 KGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASG---GEPGRVDRVKAGIPM-GRGGTAEEVARAILWLLSDEASY  236 (248)
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhcc---CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            99999999999999999999999999999999975432   112222333444566 67789999999999999988889


Q ss_pred             eeccEEEecCee
Q 041914          250 VTGHDLVVDGGF  261 (264)
Q Consensus       250 ~~G~~i~~dgG~  261 (264)
                      ++|+.+++|||.
T Consensus       237 ~~g~~~~~~gg~  248 (248)
T PRK06123        237 TTGTFIDVSGGR  248 (248)
T ss_pred             ccCCEEeecCCC
Confidence            999999999984

>PRK06139 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-38  Score=270.33  Aligned_cols=225  Identities=28%  Similarity=0.347  Sum_probs=190.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.++.+|++|||||++|||++++++|+++|++|+++.|+.+.+.+...+... ..++.++.+|++|.++++++++++.+.
T Consensus         2 ~~~l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~   81 (330)
T PRK06139          2 MGPLHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF   81 (330)
T ss_pred             CcCCCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999988888876655433322222 246788999999999999999999998


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++++ .|+||+++|..+..+.|+...|++
T Consensus        82 ~g~iD~lVnnAG~~~~~--~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~-~g~iV~isS~~~~~~~p~~~~Y~a  158 (330)
T PRK06139         82 GGRIDVWVNNVGVGAVG--RFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQG-HGIFINMISLGGFAAQPYAAAYSA  158 (330)
T ss_pred             cCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhcCCCCCchhHHH
Confidence            89999999999987654  788999999999999999999999999999999877 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcC-CceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          169 SKHAVIGLVRSASVQLGVH-GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ||+++.+|+++++.|+.+. ||+|++|+||+++|++........    ..   ...+. ....+||++|+.+++++..
T Consensus       159 sKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~~----~~---~~~~~-~~~~~pe~vA~~il~~~~~  228 (330)
T PRK06139        159 SKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANYT----GR---RLTPP-PPVYDPRRVAKAVVRLADR  228 (330)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCcccccccccc----cc---cccCC-CCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999874 899999999999999864321100    00   01111 3467999999999999854

>PRK05876 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.7e-38  Score=264.25  Aligned_cols=233  Identities=26%  Similarity=0.367  Sum_probs=190.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|.+++.++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (275)
T PRK05876          2 DGFPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLL   81 (275)
T ss_pred             CCcCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999988888776655443332222 2368889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..|+||++||..+..+.++...|+++
T Consensus        82 g~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (275)
T PRK05876         82 GHVDVVFSNAGIVVGG--PIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVA  159 (275)
T ss_pred             CCCCEEEECCCcCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHH
Confidence            9999999999987554  78889999999999999999999999999999876545899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHH----HhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV----EKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++++|++.++.|++++||++++|+||+++|++............    ........+....+++|+|+|+.++..+..
T Consensus       160 K~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~  239 (275)
T PRK05876        160 KYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA  239 (275)
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence            9999999999999999999999999999999998643211000000    000111122224578999999999987743

>PRK12746 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.4e-38  Score=258.42  Aligned_cols=244  Identities=27%  Similarity=0.406  Sum_probs=202.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe-cCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIA-DIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++++++||||+++||.+++++|+++|++|+++. |+.++..+....... ..++.++++|++|++++.++++++.+.+
T Consensus         3 ~~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~   82 (254)
T PRK12746          3 NLDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNEL   82 (254)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHh
Confidence            46789999999999999999999999999976654 544433333222222 2368889999999999999999998877


Q ss_pred             ------CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           90 ------GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        90 ------~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                            +++|++|||+|.....  ++.+.+.+.|++++++|+.+++++++.++|.|.+   .+++|++||..+..+.+++
T Consensus        83 ~~~~~~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~~v~~sS~~~~~~~~~~  157 (254)
T PRK12746         83 QIRVGTSEIDILVNNAGIGTQG--TIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRA---EGRVINISSAEVRLGFTGS  157 (254)
T ss_pred             ccccCCCCccEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECCHHhcCCCCCC
Confidence                  4799999999986543  6788899999999999999999999999999865   4699999999999899999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|+++|++++.+++.++.++.+.|+++++++||+++|++......  .+..........+. ++..+++|+++.+.+++
T Consensus       158 ~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~  234 (254)
T PRK12746        158 IAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLD--DPEIRNFATNSSVF-GRIGQVEDIADAVAFLA  234 (254)
T ss_pred             cchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhcc--ChhHHHHHHhcCCc-CCCCCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999998754321  12222222223333 67889999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++...+++|+.++++||++|
T Consensus       235 ~~~~~~~~g~~~~i~~~~~~  254 (254)
T PRK12746        235 SSDSRWVTGQIIDVSGGFCL  254 (254)
T ss_pred             CcccCCcCCCEEEeCCCccC
Confidence            88778899999999999865

>PRK09134 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-37  Score=257.85  Aligned_cols=239  Identities=24%  Similarity=0.316  Sum_probs=199.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ...+|++|||||++|||++++++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|.+++.++++++.+.+
T Consensus         6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~   85 (258)
T PRK09134          6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAAL   85 (258)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            45789999999999999999999999999988877765444333333321  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||.....  ++.+.+.++|++++++|+.+++.+++.+++.|.+.. .+++|+++|..+..+.+.+..|+++
T Consensus        86 ~~iD~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~~s~~~~~~~p~~~~Y~~s  162 (258)
T PRK09134         86 GPITLLVNNASLFEYD--SAASFTRASWDRHMATNLRAPFVLAQAFARALPADA-RGLVVNMIDQRVWNLNPDFLSYTLS  162 (258)
T ss_pred             CCCCEEEECCcCCCCC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECchhhcCCCCCchHHHHH
Confidence            9999999999987654  677889999999999999999999999999998765 6899999998888888888899999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++++++.++.++.+. |++++++||++.|+...     ....... .....+. ++..+|+|+|++++++++  ..+
T Consensus       163 K~a~~~~~~~la~~~~~~-i~v~~i~PG~v~t~~~~-----~~~~~~~-~~~~~~~-~~~~~~~d~a~~~~~~~~--~~~  232 (258)
T PRK09134        163 KAALWTATRTLAQALAPR-IRVNAIGPGPTLPSGRQ-----SPEDFAR-QHAATPL-GRGSTPEEIAAAVRYLLD--APS  232 (258)
T ss_pred             HHHHHHHHHHHHHHhcCC-cEEEEeecccccCCccc-----ChHHHHH-HHhcCCC-CCCcCHHHHHHHHHHHhc--CCC
Confidence            999999999999999775 99999999999886421     1122222 1223344 677899999999999996  457


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.+.+|||.++
T Consensus       233 ~~g~~~~i~gg~~~  246 (258)
T PRK09134        233 VTGQMIAVDGGQHL  246 (258)
T ss_pred             cCCCEEEECCCeec
Confidence            89999999999764

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=100.00  E-value=6.6e-40  Score=253.26  Aligned_cols=233  Identities=27%  Similarity=0.370  Sum_probs=196.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH--HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++++||.+++||+.+|||++++++|+++|..++++..+.++..  .++++......+.|++||+++..+++++++++..+
T Consensus         1 m~~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~   80 (261)
T KOG4169|consen    1 MDLTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILAT   80 (261)
T ss_pred             CcccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHH
Confidence            4789999999999999999999999999999888887766532  34444445568999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +|.+|++||+||+..+.          +|++.+++|+.|.++.++.++|+|.++.  ..|-|||+||+.|+.|.|....|
T Consensus        81 fg~iDIlINgAGi~~dk----------d~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY  150 (261)
T KOG4169|consen   81 FGTIDILINGAGILDDK----------DWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVY  150 (261)
T ss_pred             hCceEEEEcccccccch----------hHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhh
Confidence            99999999999997643          7999999999999999999999998753  56899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHH--hCcCCceEEEeeCCcccCcccccccC-C----ChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQ--LGVHGIRVNCVSPHGLATPLTCHAYG-M----PADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e--~~~~~i~v~~v~pG~v~t~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      ++||+++.+|+|++|..  |.+.||+++++|||++.|++...... .    ..+...+.+. ..|    ..+|++++..+
T Consensus       151 ~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~-~~~----~q~~~~~a~~~  225 (261)
T KOG4169|consen  151 AASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALE-RAP----KQSPACCAINI  225 (261)
T ss_pred             hhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHH-Hcc----cCCHHHHHHHH
Confidence            99999999999999875  67889999999999999998776522 1    1122222222 112    34788999999


Q ss_pred             HHHhCCCCCCeeccEEEecCee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +..+..   ..||+.+.+|.|.
T Consensus       226 v~aiE~---~~NGaiw~v~~g~  244 (261)
T KOG4169|consen  226 VNAIEY---PKNGAIWKVDSGS  244 (261)
T ss_pred             HHHHhh---ccCCcEEEEecCc
Confidence            998843   7899999999886

>PRK05599 hypothetical protein; Provisional

Probab=100.00  E-value=5.4e-38  Score=258.50  Aligned_cols=224  Identities=17%  Similarity=0.191  Sum_probs=186.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++++||||++|||+++|++|+ +|++|++++|+.++..+...+....  ..+.++++|++|+++++++++++.+.++++|
T Consensus         1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   79 (246)
T PRK05599          1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS   79 (246)
T ss_pred             CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence            579999999999999999999 5999888888766554333332222  2478899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|+....  +..+.+.+++.+.+++|+.+++.+++.++|.|.+++.+|+||++||..+..+.+++..|+++|+|+
T Consensus        80 ~lv~nag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~  157 (246)
T PRK05599         80 LAVVAFGILGDQ--ERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGL  157 (246)
T ss_pred             EEEEecCcCCCc--hhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHH
Confidence            999999986543  455677888999999999999999999999998754258999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      ++|+++++.|++++||+||+++||+++|++.....               +. ....+|||+|+.++++++....   ++
T Consensus       158 ~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~---------------~~-~~~~~pe~~a~~~~~~~~~~~~---~~  218 (246)
T PRK05599        158 DAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK---------------PA-PMSVYPRDVAAAVVSAITSSKR---ST  218 (246)
T ss_pred             HHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC---------------CC-CCCCCHHHHHHHHHHHHhcCCC---Cc
Confidence            99999999999999999999999999999753221               10 1135899999999999976432   55


Q ss_pred             EEEecCee
Q 041914          254 DLVVDGGF  261 (264)
Q Consensus       254 ~i~~dgG~  261 (264)
                      .+.+++++
T Consensus       219 ~~~~~~~~  226 (246)
T PRK05599        219 TLWIPGRL  226 (246)
T ss_pred             eEEeCccH
Confidence            67777664

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=2e-37  Score=255.71  Aligned_cols=244  Identities=30%  Similarity=0.484  Sum_probs=201.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.++++||||++++||.++++.|+++|++|+++.|+..+..+...+... ..++.++++|+++.++++++++.+.+.++
T Consensus         2 ~~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (253)
T PRK08217          2 DLKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFG   81 (253)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            47899999999999999999999999999988888776554333332222 24688899999999999999999998889


Q ss_pred             CccEEEEcCCCCCCCC------CCc-cCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           91 QLDIMFSNAGILSSSD------QTV-LDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~------~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++|++|||+|......      ..+ .+.+.++|+.++++|+.+++.+++.++|.|.+....+.|+++||.. ..+.++.
T Consensus        82 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~-~~~~~~~  160 (253)
T PRK08217         82 QLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIA-RAGNMGQ  160 (253)
T ss_pred             CCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEcccc-ccCCCCC
Confidence            9999999999765321      112 6778899999999999999999999999998764367899999875 4577788


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|+++|+++++++++++.++.++||++++++||+++|++....    .+...+.+....|. +++.+|+|+++.+.+|+
T Consensus       161 ~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~----~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~  235 (253)
T PRK08217        161 TNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAM----KPEALERLEKMIPV-GRLGEPEEIAHTVRFII  235 (253)
T ss_pred             chhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc----CHHHHHHHHhcCCc-CCCcCHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999987543    12333334444565 67889999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +  ..+++|++|.+|||+.|
T Consensus       236 ~--~~~~~g~~~~~~gg~~~  253 (253)
T PRK08217        236 E--NDYVTGRVLEIDGGLRL  253 (253)
T ss_pred             c--CCCcCCcEEEeCCCccC
Confidence            5  46889999999999875

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=100.00  E-value=8.3e-38  Score=288.99  Aligned_cols=250  Identities=34%  Similarity=0.472  Sum_probs=208.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...+.+|++|||||++|||++++++|+++|++|+++.|+.+.......+..   ....+..+++|++|.+++.++++++.
T Consensus       409 ~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~  488 (676)
T TIGR02632       409 EKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVA  488 (676)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            345789999999999999999999999999998888887655433222222   22367889999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++|+||||||.....  ++.+.+.++|+..+++|+.+++.+++.+++.|++++..++||++||..+..+.++...|
T Consensus       489 ~~~g~iDilV~nAG~~~~~--~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY  566 (676)
T TIGR02632       489 LAYGGVDIVVNNAGIATSS--PFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAY  566 (676)
T ss_pred             HhcCCCcEEEECCCCCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHH
Confidence            9999999999999986544  77888999999999999999999999999999876535799999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc--ccccc--------cCCChHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP--LTCHA--------YGMPADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~--~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                      +++|++++++++.++.|+++.||+||+|+||.+.++  ++...        .....++..+.+....+. ++.++|||||
T Consensus       567 ~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l-~r~v~peDVA  645 (676)
T TIGR02632       567 SAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTLL-KRHIFPADIA  645 (676)
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCCc-CCCcCHHHHH
Confidence            999999999999999999999999999999998642  32111        011122333334445566 7889999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +++.+|+++...++||++|.+|||+.
T Consensus       646 ~av~~L~s~~~~~~TG~~i~vDGG~~  671 (676)
T TIGR02632       646 EAVFFLASSKSEKTTGCIITVDGGVP  671 (676)
T ss_pred             HHHHHHhCCcccCCcCcEEEECCCch
Confidence            99999998888899999999999974

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=2.9e-37  Score=253.85  Aligned_cols=244  Identities=33%  Similarity=0.538  Sum_probs=208.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|++||||++++||++++++|+++|++|+++.|+..+..+...+...  ..++.++++|+++.+++.++++++.+.+
T Consensus         2 ~~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   81 (248)
T PRK05557          2 SLEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEF   81 (248)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46789999999999999999999999999988888876654333333332  2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++||++|.....  +..+.+.+.+++.+++|+.+++.+.+.+++.+.+.+ .+++|++||..+..+.++...|+.+
T Consensus        82 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~iss~~~~~~~~~~~~y~~s  158 (248)
T PRK05557         82 GGVDILVNNAGITRDN--LLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQR-SGRIINISSVVGLMGNPGQANYAAS  158 (248)
T ss_pred             CCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEEcccccCcCCCCCchhHHH
Confidence            9999999999987654  667788999999999999999999999999998766 6799999999888888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.+++.++.++++.+|++++++||+++|++....   . +..........+. +++.+++|+++++.+|+.+...+
T Consensus       159 k~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  233 (248)
T PRK05557        159 KAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDAL---P-EDVKEAILAQIPL-GRLGQPEEIASAVAFLASDEAAY  233 (248)
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEecCccCCcccccc---C-hHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcccCC
Confidence            99999999999999999999999999999999886533   1 2222233333444 67789999999999999887889


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.|++|||++|
T Consensus       234 ~~g~~~~i~~~~~~  247 (248)
T PRK05557        234 ITGQTLHVNGGMVM  247 (248)
T ss_pred             ccccEEEecCCccC
Confidence            99999999999987

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=100.00  E-value=6.8e-38  Score=242.41  Aligned_cols=246  Identities=26%  Similarity=0.292  Sum_probs=214.5

Q ss_pred             ccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..|+||++||+|-.  ..|++.||+.|.++|+++.+.+..+ ++.+...+..+. +...+++||+++.++++++++++++
T Consensus         2 g~L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~   80 (259)
T COG0623           2 GLLEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKK   80 (259)
T ss_pred             CccCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHH
Confidence            46899999999964  6999999999999999966655543 555554444432 3457899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           88 NYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      +||++|+|||+-+..+..  ...+.|.+.+.|...+++..++...+.+++.|.|..   .|.++.++-..+....|.+..
T Consensus        81 ~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~---ggSiltLtYlgs~r~vPnYNv  157 (259)
T COG0623          81 KWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNN---GGSILTLTYLGSERVVPNYNV  157 (259)
T ss_pred             hhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCC---CCcEEEEEeccceeecCCCch
Confidence            999999999999987632  357778999999999999999999999999999987   579999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      .+.+|++|++-+|.+|.+++++|||||.|+.||+.|--.+...  .+...........|. +|.++.|||++..+||+|+
T Consensus       158 MGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~--~f~~~l~~~e~~aPl-~r~vt~eeVG~tA~fLlSd  234 (259)
T COG0623         158 MGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIG--DFRKMLKENEANAPL-RRNVTIEEVGNTAAFLLSD  234 (259)
T ss_pred             hHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccc--cHHHHHHHHHhhCCc-cCCCCHHHhhhhHHHHhcc
Confidence            9999999999999999999999999999999999997554332  356666677777888 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      -.+.+||+++.+|+||.+
T Consensus       235 LssgiTGei~yVD~G~~i  252 (259)
T COG0623         235 LSSGITGEIIYVDSGYHI  252 (259)
T ss_pred             hhcccccceEEEcCCcee
Confidence            999999999999999975

>PRK07577 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-37  Score=253.23  Aligned_cols=233  Identities=27%  Similarity=0.368  Sum_probs=198.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|++|||||+++||++++++|+++|++|+++.|+..+.      .    ...++++|++|.++++++++++.+.+ ++|
T Consensus         2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------~----~~~~~~~D~~~~~~~~~~~~~~~~~~-~~d   70 (234)
T PRK07577          2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------F----PGELFACDLADIEQTAATLAQINEIH-PVD   70 (234)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------c----CceEEEeeCCCHHHHHHHHHHHHHhC-CCc
Confidence            578999999999999999999999999999888876541      0    12478999999999999999998876 689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||.. ..+.+....|+++|+++
T Consensus        71 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~  146 (234)
T PRK07577         71 AIVNNVGIALPQ--PLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLRE-QGRIVNICSRA-IFGALDRTSYSAAKSAL  146 (234)
T ss_pred             EEEECCCCCCCC--ChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcccc-ccCCCCchHHHHHHHHH
Confidence            999999987654  777889999999999999999999999999998876 68999999985 45667889999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      ++|++.++.|+++.||++++|+||++.|++....... .++.........|. ++..+|+|++..+++|+++...+++|+
T Consensus       147 ~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~a~~~~~l~~~~~~~~~g~  224 (234)
T PRK07577        147 VGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPV-GSEEEKRVLASIPM-RRLGTPEEVAAAIAFLLSDDAGFITGQ  224 (234)
T ss_pred             HHHHHHHHHHHHhhCcEEEEEecCcccCccccccccc-chhHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCcccCCccce
Confidence            9999999999999999999999999999987543211 12222223334455 667899999999999998888899999


Q ss_pred             EEEecCeeec
Q 041914          254 DLVVDGGFLI  263 (264)
Q Consensus       254 ~i~~dgG~~~  263 (264)
                      .+.+|||..|
T Consensus       225 ~~~~~g~~~~  234 (234)
T PRK07577        225 VLGVDGGGSL  234 (234)
T ss_pred             EEEecCCccC
Confidence            9999999754

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=3e-37  Score=254.75  Aligned_cols=242  Identities=29%  Similarity=0.383  Sum_probs=199.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++++++++|||||+++||++++++|+++|++|+++.++..+......... . ..++.++.+|+++++++.++++++.+.
T Consensus         2 ~~~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (252)
T PRK06077          2 YSLKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDR   81 (252)
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHH
Confidence            55778999999999999999999999999998777765433222222221 1 235778999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.+.+.+++.+++|+.+++.+++.++|.|++   .+++|++||..+..+.++...|++
T Consensus        82 ~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~  156 (252)
T PRK06077         82 YGVADILVNNAGLGLFS--PFLNVDDKLIDKHISTDFKSVIYCSQELAKEMRE---GGAIVNIASVAGIRPAYGLSIYGA  156 (252)
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhc---CcEEEEEcchhccCCCCCchHHHH
Confidence            99999999999986554  6777889999999999999999999999999976   469999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC---CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG---MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +|++++.+++.++.++++ +|+++.+.||+++|++......   ...+....    ..+..+++++|||+|++++++++ 
T Consensus       157 sK~~~~~~~~~l~~~~~~-~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~dva~~~~~~~~-  230 (252)
T PRK06077        157 MKAAVINLTKYLALELAP-KIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAE----KFTLMGKILDPEEVAEFVAAILK-  230 (252)
T ss_pred             HHHHHHHHHHHHHHHHhc-CCEEEEEeeCCccChHHHhhhhcccccHHHHHH----hcCcCCCCCCHHHHHHHHHHHhC-
Confidence            999999999999999988 9999999999999997643221   11111111    11222678999999999999995 


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                       ....+|+.+.+|+|++|.
T Consensus       231 -~~~~~g~~~~i~~g~~~~  248 (252)
T PRK06077        231 -IESITGQVFVLDSGESLK  248 (252)
T ss_pred             -ccccCCCeEEecCCeecc
Confidence             346899999999998863

>PRK08703 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-37  Score=253.02  Aligned_cols=232  Identities=18%  Similarity=0.235  Sum_probs=195.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCC--HHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTN--ECQVKALVDSTV   86 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~--~~~~~~~~~~~~   86 (264)
                      .+|++|+++||||++|||++++++|+++|++|++++|+.+.......+...  ...+.++++|+++  .+++.++++++.
T Consensus         2 ~~l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~   81 (239)
T PRK08703          2 ATLSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIA   81 (239)
T ss_pred             CCCCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHH
Confidence            357899999999999999999999999999998888887654333322211  2356788999986  678999999999


Q ss_pred             Hhc-CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           87 QNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        87 ~~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      +.+ +++|++|||||..... .++.+.+.++|++.+++|+.+++.+++.++|.|.+.+ .+++++++|..+..+.+++..
T Consensus        82 ~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~  159 (239)
T PRK08703         82 EATQGKLDGIVHCAGYFYAL-SPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSP-DASVIFVGESHGETPKAYWGG  159 (239)
T ss_pred             HHhCCCCCEEEEeccccccC-CCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCC-CCEEEEEeccccccCCCCccc
Confidence            888 8899999999976432 3778899999999999999999999999999998766 689999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcC-CceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVH-GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      |++||++++.|++.++.|+.++ +|+|++|.||+++|++.......   +        . . .+..+++|++..++|+++
T Consensus       160 Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~~~~---~--------~-~-~~~~~~~~~~~~~~~~~~  226 (239)
T PRK08703        160 FGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKSHPG---E--------A-K-SERKSYGDVLPAFVWWAS  226 (239)
T ss_pred             hHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCccccccCCC---C--------C-c-cccCCHHHHHHHHHHHhC
Confidence            9999999999999999999887 69999999999999976432110   0        0 0 234589999999999999


Q ss_pred             CCCCCeeccEEEe
Q 041914          245 RDSEFVTGHDLVV  257 (264)
Q Consensus       245 ~~~~~~~G~~i~~  257 (264)
                      +...++||++|.+
T Consensus       227 ~~~~~~~g~~~~~  239 (239)
T PRK08703        227 AESKGRSGEIVYL  239 (239)
T ss_pred             ccccCcCCeEeeC
Confidence            9999999999875

>PRK12827 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-37  Score=254.55  Aligned_cols=242  Identities=31%  Similarity=0.493  Sum_probs=202.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc---hhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ---DELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .++++++++||||+++||++++++|+++|++|+++.+..   .+..+.+.+...  ..++.++.+|++|.++++++++++
T Consensus         2 ~~~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   81 (249)
T PRK12827          2 ASLDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAG   81 (249)
T ss_pred             CCcCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            456789999999999999999999999999988866532   222233333322  246889999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHH-HHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA-RVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l-~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      .+.++++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.+. +.|+++. .+++|++||..+..+.+++.
T Consensus        82 ~~~~~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~  158 (249)
T PRK12827         82 VEEFGRLDILVNNAGIATDA--AFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARR-GGRIVNIASVAGVRGNRGQV  158 (249)
T ss_pred             HHHhCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCC-CeEEEEECCchhcCCCCCCc
Confidence            99989999999999987654  77888999999999999999999999999 6665555 67999999999998889999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+.+|++++.+++.++.++++.||++++++||+++|++.....   ..   .......|. .+..+++|+++.++++++
T Consensus       159 ~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~---~~---~~~~~~~~~-~~~~~~~~va~~~~~l~~  231 (249)
T PRK12827        159 NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA---PT---EHLLNPVPV-QRLGEPDEVAALVAFLVS  231 (249)
T ss_pred             hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccc---hH---HHHHhhCCC-cCCcCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999764321   11   122223444 556799999999999998


Q ss_pred             CCCCCeeccEEEecCeee
Q 041914          245 RDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~  262 (264)
                      +...+++|+.+.+|||++
T Consensus       232 ~~~~~~~g~~~~~~~g~~  249 (249)
T PRK12827        232 DAASYVTGQVIPVDGGFC  249 (249)
T ss_pred             cccCCccCcEEEeCCCCC
Confidence            888899999999999974

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=100.00  E-value=4.9e-37  Score=253.14  Aligned_cols=245  Identities=33%  Similarity=0.540  Sum_probs=208.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+|++|||||++++|++++++|+++|++|+++.|+.++......+.... .++.++.+|++|.++++++++++.++++
T Consensus         3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (251)
T PRK12826          3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFG   82 (251)
T ss_pred             CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            467899999999999999999999999999988888866544433333222 3588999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhch
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMS  169 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~s  169 (264)
                      ++|++|||+|.....  ++.+.+.+++++.++.|+.+++.+++.++|.|.+++ .+++|++||..+. .+.++...|+.+
T Consensus        83 ~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~ii~~ss~~~~~~~~~~~~~y~~s  159 (251)
T PRK12826         83 RLDILVANAGIFPLT--PFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAG-GGRIVLTSSVAGPRVGYPGLAHYAAS  159 (251)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechHhhccCCCCccHHHHH
Confidence            999999999987654  677889999999999999999999999999998876 6899999999988 788889999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.+++.++.++++.|++++.+.||.+.|++......   ......+....|. +++.+++|+++++++++++...+
T Consensus       160 K~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  235 (251)
T PRK12826        160 KAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGD---AQWAEAIAAAIPL-GRLGEPEDIAAAVLFLASDEARY  235 (251)
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCc---hHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999899999999999999997654321   1112223334455 57889999999999999888889


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.|.+|||+++
T Consensus       236 ~~g~~~~~~~g~~~  249 (251)
T PRK12826        236 ITGQTLPVDGGATL  249 (251)
T ss_pred             cCCcEEEECCCccC
Confidence            99999999999875

>PRK07074 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.4e-37  Score=253.62  Aligned_cols=242  Identities=28%  Similarity=0.409  Sum_probs=203.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|++|||||+++||++++++|+++|++|+++.|+.++.. .+.+.....++.++++|+.|.+++.++++++.++++++|+
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   80 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALA-AFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV   80 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            579999999999999999999999999888887765543 3333333346889999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      +|||+|.....  ++.+.+.++|.+.+++|+.+++.+++++++.+.+++ .++||++||..+..+ .+...|+.+|++++
T Consensus        81 vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~  156 (257)
T PRK07074         81 LVANAGAARAA--SLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRS-RGAVVNIGSVNGMAA-LGHPAYSAAKAGLI  156 (257)
T ss_pred             EEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhcCC-CCCcccHHHHHHHH
Confidence            99999987654  677889999999999999999999999999998776 689999999876543 45678999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccE
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD  254 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~  254 (264)
                      .+++.++.+++++||++++++||++.|++........ +..........|. .+++.++|+++++++|+++...+++|+.
T Consensus       157 ~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~d~a~~~~~l~~~~~~~~~g~~  234 (257)
T PRK07074        157 HYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAAN-PQVFEELKKWYPL-QDFATPDDVANAVLFLASPAARAITGVC  234 (257)
T ss_pred             HHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccC-hHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCchhcCcCCcE
Confidence            9999999999999999999999999999865432222 2222322233454 7889999999999999988788999999


Q ss_pred             EEecCeeec
Q 041914          255 LVVDGGFLI  263 (264)
Q Consensus       255 i~~dgG~~~  263 (264)
                      +.+|||+..
T Consensus       235 ~~~~~g~~~  243 (257)
T PRK07074        235 LPVDGGLTA  243 (257)
T ss_pred             EEeCCCcCc
Confidence            999999864

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.7e-37  Score=251.07  Aligned_cols=243  Identities=32%  Similarity=0.500  Sum_probs=205.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEE-ecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVI-ADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +|.+|++|||||+++||.+++++|+++|++|+++ .|+.++.......... ..++.++.+|++|++++.++++++.+.+
T Consensus         2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T PRK05565          2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF   81 (247)
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            4778999999999999999999999999998887 6655443332222211 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++||++|....  .++.+.+.++|++.+++|+.+++.+++.++|.+.+++ .+++|++||..+..+.+....|+.+
T Consensus        82 ~~id~vi~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~s  158 (247)
T PRK05565         82 GKIDILVNNAGISNF--GLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRK-SGVIVNISSIWGLIGASCEVLYSAS  158 (247)
T ss_pred             CCCCEEEECCCcCCC--CChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCHhhccCCCCccHHHHH
Confidence            999999999998743  3677889999999999999999999999999998876 6899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.+++.++.++.+.||++++++||+++|++......   .. ...+....+. .+..+++|+++.+++++++....
T Consensus       159 K~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~---~~-~~~~~~~~~~-~~~~~~~~va~~~~~l~~~~~~~  233 (247)
T PRK05565        159 KGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSE---ED-KEGLAEEIPL-GRLGKPEEIAKVVLFLASDDASY  233 (247)
T ss_pred             HHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccCh---HH-HHHHHhcCCC-CCCCCHHHHHHHHHHHcCCccCC
Confidence            9999999999999999999999999999999987654321   11 1111123333 56789999999999999998999


Q ss_pred             eeccEEEecCeee
Q 041914          250 VTGHDLVVDGGFL  262 (264)
Q Consensus       250 ~~G~~i~~dgG~~  262 (264)
                      ++|+.+.+|+|++
T Consensus       234 ~~g~~~~~~~~~~  246 (247)
T PRK05565        234 ITGQIITVDGGWT  246 (247)
T ss_pred             ccCcEEEecCCcc
Confidence            9999999999975

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=6.1e-37  Score=273.00  Aligned_cols=241  Identities=29%  Similarity=0.372  Sum_probs=202.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++++||||+++|||++++++|+++|++|+++.+... +..+.+....   ...++.+|++|.++++++++.+.+.++
T Consensus       207 ~~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~---~~~~~~~Dv~~~~~~~~~~~~~~~~~g  283 (450)
T PRK08261        207 PLAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRV---GGTALALDITAPDAPARIAEHLAERHG  283 (450)
T ss_pred             CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEeCCCHHHHHHHHHHHHHhCC
Confidence            467999999999999999999999999999888877432 2222222222   235789999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|+....  .+.+.+.++|++++++|+.+++++.+.+++.+..+. .++||++||..+..+.+++..|+++|
T Consensus       284 ~id~vi~~AG~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~g~iv~~SS~~~~~g~~~~~~Y~asK  360 (450)
T PRK08261        284 GLDIVVHNAGITRDK--TLANMDEARWDSVLAVNLLAPLRITEALLAAGALGD-GGRIVGVSSISGIAGNRGQTNYAASK  360 (450)
T ss_pred             CCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCChHHHHHH
Confidence            999999999987654  788899999999999999999999999999665444 68999999999998999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +++++|++.++.+++++||++|+|+||+++|++...... ...+....   ..+. .+...|+|+++++.||+++...++
T Consensus       361 aal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~-~~~~~~~~---~~~l-~~~~~p~dva~~~~~l~s~~~~~i  435 (450)
T PRK08261        361 AGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPF-ATREAGRR---MNSL-QQGGLPVDVAETIAWLASPASGGV  435 (450)
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccch-hHHHHHhh---cCCc-CCCCCHHHHHHHHHHHhChhhcCC
Confidence            999999999999999999999999999999998754311 11122222   2233 566789999999999999999999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      ||++|.+|||-+|
T Consensus       436 tG~~i~v~g~~~~  448 (450)
T PRK08261        436 TGNVVRVCGQSLL  448 (450)
T ss_pred             CCCEEEECCCccc
Confidence            9999999999765

>PRK07832 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.9e-37  Score=254.62  Aligned_cols=242  Identities=24%  Similarity=0.295  Sum_probs=198.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |+++||||++|||++++++|+++|++|+++.|+.+...+...+...  .....++++|++|++++.++++++.+.++++|
T Consensus         1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (272)
T PRK07832          1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD   80 (272)
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            5799999999999999999999999988887766544333222221  12355689999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+.+..++||++||..+..+.+....|+++|+++
T Consensus        81 ~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~  158 (272)
T PRK07832         81 VVMNIAGISAWG--TVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGL  158 (272)
T ss_pred             EEEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHH
Confidence            999999987544  678899999999999999999999999999997653258999999999988889999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC----ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      ++|++.++.|++++||+|++|+||+++|++.......    ..+...... .. .. ++..+|||+|+.+++++. ..++
T Consensus       159 ~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~~~~~vA~~~~~~~~-~~~~  234 (272)
T PRK07832        159 RGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWV-DR-FR-GHAVTPEKAAEKILAGVE-KNRY  234 (272)
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHH-Hh-cc-cCCCCHHHHHHHHHHHHh-cCCe
Confidence            9999999999999999999999999999987543211    111111111 11 12 567899999999999995 5789


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.+.+++|+++
T Consensus       235 ~~~~~~~~~~~~~~  248 (272)
T PRK07832        235 LVYTSPDIRALYWF  248 (272)
T ss_pred             EEecCcchHHHHHH
Confidence            99999999998765

>PRK07109 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.3e-36  Score=258.98  Aligned_cols=225  Identities=26%  Similarity=0.326  Sum_probs=189.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|+++||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++|.++++++++++.+++
T Consensus         4 ~~l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~   83 (334)
T PRK07109          4 KPIGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEEL   83 (334)
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHC
Confidence            457889999999999999999999999999988888876554333322222 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|.....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.+....|+++
T Consensus        84 g~iD~lInnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~as  160 (334)
T PRK07109         84 GPIDTWVNNAMVTVFG--PFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRD-RGAIIQVGSALAYRSIPLQSAYCAA  160 (334)
T ss_pred             CCCCEEEECCCcCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEeCChhhccCCCcchHHHHH
Confidence            9999999999986544  788899999999999999999999999999999876 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCc--CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGV--HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |+++++|+++++.|+..  .+|++++|+||.++|++.....    .. .  -....|. .+..+|||+|+.++++++..
T Consensus       161 K~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~----~~-~--~~~~~~~-~~~~~pe~vA~~i~~~~~~~  231 (334)
T PRK07109        161 KHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR----SR-L--PVEPQPV-PPIYQPEVVADAILYAAEHP  231 (334)
T ss_pred             HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh----hh-c--cccccCC-CCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999975  4799999999999999764221    00 0  0111223 56779999999999999754

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=5.9e-36  Score=246.08  Aligned_cols=244  Identities=29%  Similarity=0.485  Sum_probs=207.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++..|++|||||+++||++++++|+++|++|+++.++..+..+.+.+...  ..+++++.+|++|++++.++++++.+.+
T Consensus         3 ~~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (249)
T PRK12825          3 SLMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERF   82 (249)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHc
Confidence            34568999999999999999999999999987777776655444443332  2468899999999999999999999988


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +.+|++||++|.....  ++.+.+.+++++.+++|+.+++.+++.++|++++.+ .+++|++||..+..+.+++..|+.+
T Consensus        83 ~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~i~~SS~~~~~~~~~~~~y~~s  159 (249)
T PRK12825         83 GRIDILVNNAGIFEDK--PLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQR-GGRIVNISSVAGLPGWPGRSNYAAA  159 (249)
T ss_pred             CCCCEEEECCccCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECccccCCCCCCchHHHHH
Confidence            9999999999976543  677789999999999999999999999999998876 6899999999999888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++++++.++.++.+.||+++.++||.+.|++......   ...... ....|. ++..+++|+++.+.+++++....
T Consensus       160 K~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~---~~~~~~-~~~~~~-~~~~~~~dva~~~~~~~~~~~~~  234 (249)
T PRK12825        160 KAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIE---EAREAK-DAETPL-GRSGTPEDIARAVAFLCSDASDY  234 (249)
T ss_pred             HHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccc---hhHHhh-hccCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            9999999999999999889999999999999998654321   111111 112344 66889999999999999888889


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      .+|++|.+|||+.+
T Consensus       235 ~~g~~~~i~~g~~~  248 (249)
T PRK12825        235 ITGQVIEVTGGVDV  248 (249)
T ss_pred             cCCCEEEeCCCEee
Confidence            99999999999876

>PRK06182 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.3e-36  Score=254.11  Aligned_cols=223  Identities=27%  Similarity=0.344  Sum_probs=187.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++|+++|||+++|||++++++|+++|++|+++.|+.++..+ +..    ..+.++.+|++|.++++++++++.+.++++|
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~-~~~----~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id   76 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMED-LAS----LGVHPLSLDVTDEASIKAAVDTIIAEEGRID   76 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHh----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            57999999999999999999999999998888887654422 221    2477899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||+|+....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|+++
T Consensus        77 ~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sKaa~  153 (273)
T PRK06182         77 VLVNNAGYGSYG--AIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQR-SGRIINISSMGGKIYTPLGAWYHATKFAL  153 (273)
T ss_pred             EEEECCCcCCCC--chhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhcCCCCCccHhHHHHHHH
Confidence            999999987554  788899999999999999999999999999998876 68999999999888888888999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--------CCChHH----HHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--------GMPADE----VEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--------~~~~~~----~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      ++|+++++.|+++.||++++|+||+++|++.....        .....+    ..+.+....+. +++.+|+|+|+.+++
T Consensus       154 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vA~~i~~  232 (273)
T PRK06182        154 EGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYGS-GRLSDPSVIADAISK  232 (273)
T ss_pred             HHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhcc-ccCCCHHHHHHHHHH
Confidence            99999999999999999999999999999753211        000111    11122222233 678899999999999


Q ss_pred             HhCC
Q 041914          242 LACR  245 (264)
Q Consensus       242 l~s~  245 (264)
                      +++.
T Consensus       233 ~~~~  236 (273)
T PRK06182        233 AVTA  236 (273)
T ss_pred             HHhC
Confidence            9974

>PRK12828 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=246.41  Aligned_cols=237  Identities=27%  Similarity=0.408  Sum_probs=203.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++++|++|||||+++||++++++|+++|++|+++.|+..+..+...+... .....+.+|++|.+++.++++++.+.+
T Consensus         2 ~~~~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~   80 (239)
T PRK12828          2 EHSLQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQF   80 (239)
T ss_pred             CCCCCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHh
Confidence            4568899999999999999999999999999998898877655444333322 246678899999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++||++|.....  ++.+.+.+++++.+++|+.+++.+++.++|.+.+++ .+++|++||..+..+.++...|+.+
T Consensus        81 ~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~y~~s  157 (239)
T PRK12828         81 GRLDALVNIAGAFVWG--TIADGDADTWDRMYGVNVKTTLNASKAALPALTASG-GGRIVNIGAGAALKAGPGMGAYAAA  157 (239)
T ss_pred             CCcCEEEECCcccCcC--ChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcC-CCEEEEECchHhccCCCCcchhHHH
Confidence            9999999999986543  677789999999999999999999999999998766 7899999999998888889999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.+++.++.++.+.||+++.+.||++.+++.....  +          ..+. ..+.+++|+++++.+++++...+
T Consensus       158 k~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~~--~----------~~~~-~~~~~~~dva~~~~~~l~~~~~~  224 (239)
T PRK12828        158 KAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRADM--P----------DADF-SRWVTPEQIAAVIAFLLSDEAQA  224 (239)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhcC--C----------chhh-hcCCCHHHHHHHHHHHhCccccc
Confidence            999999999999999888999999999999998543211  0          0111 34678999999999999877778


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.+.+|||+++
T Consensus       225 ~~g~~~~~~g~~~~  238 (239)
T PRK12828        225 ITGASIPVDGGVAL  238 (239)
T ss_pred             ccceEEEecCCEeC
Confidence            99999999999986

>PRK07825 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-36  Score=251.13  Aligned_cols=217  Identities=32%  Similarity=0.396  Sum_probs=187.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++++++|||||++|||++++++|+++|++|+++.|+.+...+ +.+...  ++.++.+|++|++++.++++++.+.+++
T Consensus         2 ~~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~-~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~   78 (273)
T PRK07825          2 DLRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKE-TAAELG--LVVGGPLDVTDPASFAAFLDAVEADLGP   78 (273)
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhc--cceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999999999999999999999999998888776555433 332222  4778999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|+....  ++.+.+.+++++++++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|+++|+
T Consensus        79 id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  155 (273)
T PRK07825         79 IDVLVNNAGVMPVG--PFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRG-RGHVVNVASLAGKIPVPGMATYCASKH  155 (273)
T ss_pred             CCEEEECCCcCCCC--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCEEEEEcCccccCCCCCCcchHHHHH
Confidence            99999999987654  788889999999999999999999999999999877 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +++.|++.++.|+++.||++++|+||++.|++......             .. .....+|+|+|+.++.++.+...
T Consensus       156 a~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~~~-------------~~-~~~~~~~~~va~~~~~~l~~~~~  218 (273)
T PRK07825        156 AVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGTGG-------------AK-GFKNVEPEDVAAAIVGTVAKPRP  218 (273)
T ss_pred             HHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccccc-------------cc-CCCCCCHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999997642210             00 12457999999999999875433

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=100.00  E-value=7.5e-36  Score=245.58  Aligned_cols=241  Identities=29%  Similarity=0.400  Sum_probs=196.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHH-hhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA-TSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++|||||+++||++++++|+++|++|+++.++..+..++.. +... ...+..+++|++|+++++++++++.+.++++|
T Consensus         2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id   81 (247)
T PRK09730          2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA   81 (247)
T ss_pred             CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence            689999999999999999999999997765444333323222 2222 23678899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCC-CchhhchH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKR-RTDYHMSK  170 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~-~~~y~~sK  170 (264)
                      ++|||+|..... .++.+.+.++|+..+++|+.+++.+++.+++.|.++.  ..+++|++||..+..+.+. +..|+++|
T Consensus        82 ~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK  160 (247)
T PRK09730         82 ALVNNAGILFTQ-CTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASK  160 (247)
T ss_pred             EEEECCCCCCCC-CccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHH
Confidence            999999976432 3677889999999999999999999999999998642  2478999999988877765 46899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.+++.++.++.+.||++++++||.+.|++.....   .+..........|. .+..+|+|+++.+++++++...++
T Consensus       161 ~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~~~~~~  236 (247)
T PRK09730        161 GAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGG---EPGRVDRVKSNIPM-QRGGQPEEVAQAIVWLLSDKASYV  236 (247)
T ss_pred             HHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCC---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHhhcChhhcCc
Confidence            99999999999999999999999999999999754321   12222223334455 567799999999999999888899


Q ss_pred             eccEEEecCee
Q 041914          251 TGHDLVVDGGF  261 (264)
Q Consensus       251 ~G~~i~~dgG~  261 (264)
                      +|+.+.+|||.
T Consensus       237 ~g~~~~~~g~~  247 (247)
T PRK09730        237 TGSFIDLAGGK  247 (247)
T ss_pred             cCcEEecCCCC
Confidence            99999999984

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=100.00  E-value=1.3e-35  Score=243.78  Aligned_cols=244  Identities=31%  Similarity=0.523  Sum_probs=206.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+|++|||||+++||.+++++|+++|++|+++.|+..+......+.. ...++.++.+|++|++++.++++++.+.++
T Consensus         2 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (246)
T PRK05653          2 SLQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFG   81 (246)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4567899999999999999999999999998888887655433222222 124688999999999999999999998889


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      .+|++||++|.....  +..+.+.+++++.++.|+.+++.+++.+.|+|.+.+ .+++|++||..+..+.++...|+.+|
T Consensus        82 ~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk  158 (246)
T PRK05653         82 ALDILVNNAGITRDA--LLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKAR-YGRIVNISSVSGVTGNPGQTNYSAAK  158 (246)
T ss_pred             CCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECcHHhccCCCCCcHhHhHH
Confidence            999999999986654  667789999999999999999999999999998766 68999999999888888899999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.+++.++.++.+.|+++++++||.+.+++....    .....+......|. +++.+++|+++.+++++++...++
T Consensus       159 ~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~~~~~~~~~  233 (246)
T PRK05653        159 AGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGL----PEEVKAEILKEIPL-GRLGQPEEVANAVAFLASDAASYI  233 (246)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhh----hHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCc
Confidence            9999999999999998899999999999999876431    12222223334454 678899999999999998888899


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.|.+|||+++
T Consensus       234 ~g~~~~~~gg~~~  246 (246)
T PRK05653        234 TGQVIPVNGGMYM  246 (246)
T ss_pred             cCCEEEeCCCeeC
Confidence            9999999999875

>PRK12829 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-35  Score=246.94  Aligned_cols=251  Identities=32%  Similarity=0.503  Sum_probs=206.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++.++++|++|||||+++||++++++|+++|++|+++.|+.+.. +.+.+.....++.++.+|++|+++++++++++.+.
T Consensus         5 ~~~~~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   83 (264)
T PRK12829          5 LLKPLDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAAL-AATAARLPGAKVTATVADVADPAQVERVFDTAVER   83 (264)
T ss_pred             HhhccCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            45568899999999999999999999999999988888865543 33333332225788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++||++|..... .+..+.+.++|++.+++|+.+++.+++.+++.+...+..++++++||..+..+.+.+..|+.
T Consensus        84 ~~~~d~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~  162 (264)
T PRK12829         84 FGGLDVLVNNAGIAGPT-GGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAA  162 (264)
T ss_pred             hCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHH
Confidence            99999999999987332 36677899999999999999999999999999887652278999999988888888899999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +|++++.+++.++.++++.+++++++.||++.|++......       ..............|. +++.+++|+++++.+
T Consensus       163 ~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~  241 (264)
T PRK12829        163 SKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISL-GRMVEPEDIAATALF  241 (264)
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCC-CCCCCHHHHHHHHHH
Confidence            99999999999999998889999999999999997643321       1111111122223344 578999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeee
Q 041914          242 LACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++++...+++|+.|.+|||..
T Consensus       242 l~~~~~~~~~g~~~~i~~g~~  262 (264)
T PRK12829        242 LASPAARYITGQAISVDGNVE  262 (264)
T ss_pred             HcCccccCccCcEEEeCCCcc
Confidence            998777889999999999964

>PRK07041 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.5e-36  Score=245.14  Aligned_cols=229  Identities=28%  Similarity=0.358  Sum_probs=186.3

Q ss_pred             EEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 041914           19 IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSN   98 (264)
Q Consensus        19 lItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~~   98 (264)
                      |||||+++||++++++|+++|++|+++.|+.++......+.....+++++.+|++|++++.++++++    +++|+||||
T Consensus         1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~----~~id~li~~   76 (230)
T PRK07041          1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA----GPFDHVVIT   76 (230)
T ss_pred             CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc----CCCCEEEEC
Confidence            6999999999999999999999988888875544332222212346889999999999999888753    789999999


Q ss_pred             CCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHHHH
Q 041914           99 AGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR  178 (264)
Q Consensus        99 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~  178 (264)
                      +|.....  ++.+.+.++|++++++|+.+++++++  .+.+.+   .++||++||..+..+.++...|+++|+++++|++
T Consensus        77 ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~--~~~~~~---~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~  149 (230)
T PRK07041         77 AADTPGG--PVRALPLAAAQAAMDSKFWGAYRVAR--AARIAP---GGSLTFVSGFAAVRPSASGVLQGAINAALEALAR  149 (230)
T ss_pred             CCCCCCC--ChhhCCHHHHHHHHHHHHHHHHHHHh--hhhhcC---CeEEEEECchhhcCCCCcchHHHHHHHHHHHHHH
Confidence            9987654  77788999999999999999999999  445532   5799999999999999999999999999999999


Q ss_pred             HHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEec
Q 041914          179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVD  258 (264)
Q Consensus       179 ~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~d  258 (264)
                      .++.|+.+  |++++++||+++|++....................|. ++..+|+|+++++++|+++  .+++|+.+.+|
T Consensus       150 ~la~e~~~--irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~--~~~~G~~~~v~  224 (230)
T PRK07041        150 GLALELAP--VRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA-RRVGQPEDVANAILFLAAN--GFTTGSTVLVD  224 (230)
T ss_pred             HHHHHhhC--ceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhcC--CCcCCcEEEeC
Confidence            99999975  9999999999999986533221112222223334455 6778999999999999973  58999999999


Q ss_pred             Ceeec
Q 041914          259 GGFLI  263 (264)
Q Consensus       259 gG~~~  263 (264)
                      ||+.+
T Consensus       225 gg~~~  229 (230)
T PRK07041        225 GGHAI  229 (230)
T ss_pred             CCeec
Confidence            99865

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=100.00  E-value=3.4e-36  Score=246.05  Aligned_cols=222  Identities=20%  Similarity=0.256  Sum_probs=181.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++++||||++|||++++++|+++|  ..++...|.....       ....+++++++|+++.++++++.    ++++++|
T Consensus         1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~-------~~~~~~~~~~~Dls~~~~~~~~~----~~~~~id   69 (235)
T PRK09009          1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD-------FQHDNVQWHALDVTDEAEIKQLS----EQFTQLD   69 (235)
T ss_pred             CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc-------cccCceEEEEecCCCHHHHHHHH----HhcCCCC
Confidence            479999999999999999999985  4444444433221       11246789999999999888754    4567999


Q ss_pred             EEEEcCCCCCCC----CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---CCCCCchh
Q 041914           94 IMFSNAGILSSS----DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---GGKRRTDY  166 (264)
Q Consensus        94 ~lv~~ag~~~~~----~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y  166 (264)
                      ++|||+|.....    ..++++.+.+.|++.+++|+.+++.+++.++|.|++++ .++++++||..+..   +.+++..|
T Consensus        70 ~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~~~i~~iss~~~~~~~~~~~~~~~Y  148 (235)
T PRK09009         70 WLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSE-SAKFAVISAKVGSISDNRLGGWYSY  148 (235)
T ss_pred             EEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccC-CceEEEEeecccccccCCCCCcchh
Confidence            999999987532    23677889999999999999999999999999998766 67999998866532   34667899


Q ss_pred             hchHHHHHHHHHHHHHHhCc--CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          167 HMSKHAVIGLVRSASVQLGV--HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +++|+++++|++.++.|+++  .+|+|++|+||+++|++....            ....|. ++..+|||+++.++++++
T Consensus       149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~------------~~~~~~-~~~~~~~~~a~~~~~l~~  215 (235)
T PRK09009        149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF------------QQNVPK-GKLFTPEYVAQCLLGIIA  215 (235)
T ss_pred             hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch------------hhcccc-CCCCCHHHHHHHHHHHHH
Confidence            99999999999999999986  689999999999999986432            112233 567899999999999999


Q ss_pred             CCCCCeeccEEEecCeee
Q 041914          245 RDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~  262 (264)
                      +..++++|+.+.+|||+.
T Consensus       216 ~~~~~~~g~~~~~~g~~~  233 (235)
T PRK09009        216 NATPAQSGSFLAYDGETL  233 (235)
T ss_pred             cCChhhCCcEEeeCCcCC
Confidence            888899999999999974

>PRK06924 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-36  Score=248.53  Aligned_cols=240  Identities=15%  Similarity=0.186  Sum_probs=193.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC--c-
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ--L-   92 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~--i-   92 (264)
                      |++|||||++|||++++++|+++|++|++++|+..+..+.+.+.. ..+++++++|+++.++++++++++.+.++.  + 
T Consensus         2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   80 (251)
T PRK06924          2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQY-NSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS   80 (251)
T ss_pred             cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhcc-CCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence            689999999999999999999999999888887644333333222 246889999999999999999999877653  2 


Q ss_pred             -cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           93 -DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        93 -d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                       +++|||+|...+. .++.+.+.++|.+.+++|+.+++.+++.++|+|++.+..++||++||..+..+.+++..|+++|+
T Consensus        81 ~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKa  159 (251)
T PRK06924         81 SIHLINNAGMVAPI-KPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKA  159 (251)
T ss_pred             ceEEEEcceecccC-cccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHH
Confidence             2899999986543 36888999999999999999999999999999987542579999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHH--HHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          172 AVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADE--VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       172 al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +++.|++.++.|++  +.||+|++|.||+++|++.........+.  ..+.+....+. +++.+|+|+|+.+++|+++. 
T Consensus       160 a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~-  237 (251)
T PRK06924        160 GLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEE-GKLLSPEYVAKALRNLLETE-  237 (251)
T ss_pred             HHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhc-CCcCCHHHHHHHHHHHHhcc-
Confidence            99999999999975  56899999999999999865321111110  11122222334 67899999999999999863 


Q ss_pred             CCeeccEEEecC
Q 041914          248 EFVTGHDLVVDG  259 (264)
Q Consensus       248 ~~~~G~~i~~dg  259 (264)
                      .+++|+.+.+|+
T Consensus       238 ~~~~G~~~~v~~  249 (251)
T PRK06924        238 DFPNGEVIDIDE  249 (251)
T ss_pred             cCCCCCEeehhh
Confidence            799999999885

>PRK06196 oxidoreductase; Provisional

Probab=100.00  E-value=5.3e-36  Score=255.22  Aligned_cols=240  Identities=25%  Similarity=0.267  Sum_probs=186.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|++++|+.+...+...+ +.  .+.++++|++|.++++++++++.+.++
T Consensus        22 ~~l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~-l~--~v~~~~~Dl~d~~~v~~~~~~~~~~~~   98 (315)
T PRK06196         22 HDLSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAG-ID--GVEVVMLDLADLESVRAFAERFLDSGR   98 (315)
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hh--hCeEEEccCCCHHHHHHHHHHHHhcCC
Confidence            457899999999999999999999999999998888876554333222 22  367899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------  158 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------  158 (264)
                      ++|+||||||+....    .+.+.++|+..+++|+.+++.+++.++|.|++++ .++||++||..+..            
T Consensus        99 ~iD~li~nAg~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~~~~~~  173 (315)
T PRK06196         99 RIDILINNAGVMACP----ETRVGDGWEAQFATNHLGHFALVNLLWPALAAGA-GARVVALSSAGHRRSPIRWDDPHFTR  173 (315)
T ss_pred             CCCEEEECCCCCCCC----CccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCeEEEECCHHhccCCCCccccCccC
Confidence            999999999986432    3456778999999999999999999999998876 68999999976532            


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC-CCCCCCCCCCChHHHHH
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE-PQTPLEGVVLRAGHVAD  237 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~edva~  237 (264)
                      +.+++..|+.||++++.|++.++.+++++||++++|+||++.|++....... ......... ...|...++.+|+|+|.
T Consensus       174 ~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~  252 (315)
T PRK06196        174 GYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPRE-EQVALGWVDEHGNPIDPGFKTPAQGAA  252 (315)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChh-hhhhhhhhhhhhhhhhhhcCCHhHHHH
Confidence            3345678999999999999999999999999999999999999986543210 000001111 01122125679999999


Q ss_pred             HHHHHhCCCCCCeeccEEEecC
Q 041914          238 AVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       238 ~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      .++||++......+|..+..|.
T Consensus       253 ~~~~l~~~~~~~~~~g~~~~~~  274 (315)
T PRK06196        253 TQVWAATSPQLAGMGGLYCEDC  274 (315)
T ss_pred             HHHHHhcCCccCCCCCeEeCCC
Confidence            9999997544434444444443

>PRK08263 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-35  Score=248.94  Aligned_cols=238  Identities=23%  Similarity=0.247  Sum_probs=193.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|++|||||+++||++++++|+++|++|+++.|+.++.. .+.+.. ...+.++++|++|+++++++++++.+.++++|
T Consensus         2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~-~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   79 (275)
T PRK08263          2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLA-DLAEKY-GDRLLPLALDVTDRAAVFAAVETAVEHFGRLD   79 (275)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHhc-cCCeeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999888888765543 232222 23678899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .+++|++||..+..+.+....|+++|+++
T Consensus        80 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~  156 (275)
T PRK08263         80 IVVNNAGYGLFG--MIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQR-SGHIIQISSIGGISAFPMSGIYHASKWAL  156 (275)
T ss_pred             EEEECCCCcccc--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhcCCCCCccHHHHHHHHH
Confidence            999999987654  788899999999999999999999999999998876 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhhcCCCCCCCCCC-CChHHHHHHHHHHhCCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKLFEPQTPLEGVV-LRAGHVADAVLFLACRDS  247 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~edva~~~~~l~s~~~  247 (264)
                      +.+++.++.++++.||+++.++||+++|++........     .+.....+....+. +++ .+|+|+++.+++++.+. 
T Consensus       157 ~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~p~dva~~~~~l~~~~-  234 (275)
T PRK08263        157 EGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSE-RSVDGDPEAAAEALLKLVDAE-  234 (275)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHh-ccCCCCHHHHHHHHHHHHcCC-
Confidence            99999999999999999999999999999874221110     11111112111222 455 89999999999999754 


Q ss_pred             CCeeccEEEecC
Q 041914          248 EFVTGHDLVVDG  259 (264)
Q Consensus       248 ~~~~G~~i~~dg  259 (264)
                       ...++++...+
T Consensus       235 -~~~~~~~~~~~  245 (275)
T PRK08263        235 -NPPLRLFLGSG  245 (275)
T ss_pred             -CCCeEEEeCch
Confidence             34455555444

>PRK08324 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.7e-35  Score=274.79  Aligned_cols=249  Identities=33%  Similarity=0.476  Sum_probs=210.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..+.||++|||||+|+||++++++|+++|++|+++.|+.+.......+......+.++.+|++|.+++.++++++.+.++
T Consensus       418 ~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g  497 (681)
T PRK08324        418 KPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFG  497 (681)
T ss_pred             cCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            34689999999999999999999999999998888887665433322222224688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|.....  ++.+.+.++|++.+++|+.+++.+++.+++.|++++..++||++||..+..+.++...|+++|
T Consensus       498 ~iDvvI~~AG~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asK  575 (681)
T PRK08324        498 GVDIVVSNAGIAISG--PIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAK  575 (681)
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHH
Confidence            999999999987654  788899999999999999999999999999998866348999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcc--cCccccccc--------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGL--ATPLTCHAY--------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v--~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      ++++.+++.++.++++.||++|+|+||.+  .|++.....        +...++..+.+....+. ++.++++|++++++
T Consensus       576 aa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-~~~v~~~DvA~a~~  654 (681)
T PRK08324        576 AAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNLL-KREVTPEDVAEAVV  654 (681)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCCc-CCccCHHHHHHHHH
Confidence            99999999999999999999999999999  787654221        11222222334444455 67899999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeee
Q 041914          241 FLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +++++.....+|+.+.+|||..
T Consensus       655 ~l~s~~~~~~tG~~i~vdgG~~  676 (681)
T PRK08324        655 FLASGLLSKTTGAIITVDGGNA  676 (681)
T ss_pred             HHhCccccCCcCCEEEECCCch
Confidence            9998778899999999999975

>PRK09135 pteridine reductase; Provisional

Probab=100.00  E-value=4.4e-35  Score=241.19  Aligned_cols=242  Identities=28%  Similarity=0.386  Sum_probs=199.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..++++|||||+++||++++++|+++|++|+++.|+.++..+.+.....   ...+.++.+|++|.+++.++++++.+++
T Consensus         4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~   83 (249)
T PRK09135          4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF   83 (249)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            4679999999999999999999999999999888876544443333221   2357889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|.....  ++.+.+.+++++.+++|+.+++.+++++.|++.++  .+.++++++..+..+.++...|+.+
T Consensus        84 ~~~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Y~~s  159 (249)
T PRK09135         84 GRLDALVNNASSFYPT--PLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQ--RGAIVNITDIHAERPLKGYPVYCAA  159 (249)
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhC--CeEEEEEeChhhcCCCCCchhHHHH
Confidence            9999999999987654  67778889999999999999999999999998765  4788998988888888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.+++.++.++.+ +|+++++.||++.|++.....  . ...........+. .+..+++|+++++.+++.+ ..+
T Consensus       160 K~~~~~~~~~l~~~~~~-~i~~~~v~pg~~~~~~~~~~~--~-~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~~-~~~  233 (249)
T PRK09135        160 KAALEMLTRSLALELAP-EVRVNAVAPGAILWPEDGNSF--D-EEARQAILARTPL-KRIGTPEDIAEAVRFLLAD-ASF  233 (249)
T ss_pred             HHHHHHHHHHHHHHHCC-CCeEEEEEeccccCccccccC--C-HHHHHHHHhcCCc-CCCcCHHHHHHHHHHHcCc-ccc
Confidence            99999999999999965 799999999999999854321  1 2222223333344 5667899999999998864 567


Q ss_pred             eeccEEEecCeeecC
Q 041914          250 VTGHDLVVDGGFLIR  264 (264)
Q Consensus       250 ~~G~~i~~dgG~~~~  264 (264)
                      .+|++|++++|...+
T Consensus       234 ~~g~~~~i~~g~~~~  248 (249)
T PRK09135        234 ITGQILAVDGGRSLT  248 (249)
T ss_pred             ccCcEEEECCCeecc
Confidence            899999999998654

>PLN00015 protochlorophyllide reductase

Probab=100.00  E-value=6.8e-36  Score=253.72  Aligned_cols=237  Identities=18%  Similarity=0.178  Sum_probs=187.3

Q ss_pred             EEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           19 IITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        19 lItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |||||++|||++++++|+++| ++|+++.|+.++..+ +.+.+.  ..++.++++|++|.++++++++++.+.++++|+|
T Consensus         1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l   79 (308)
T PLN00015          1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAER-AAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL   79 (308)
T ss_pred             CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHH-HHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence            699999999999999999999 998888876654433 333332  2467889999999999999999999888999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-CcEEEEecCCCCCCC---------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-RGSIVCTASVAGSCG---------------  159 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-~~~iv~iss~~~~~~---------------  159 (264)
                      |||||+.... .++.+.+.++|++.+++|+.+++.+++.++|.|.+++. .++||++||..+..+               
T Consensus        80 InnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~  158 (308)
T PLN00015         80 VCNAAVYLPT-AKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDL  158 (308)
T ss_pred             EECCCcCCCC-CCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhh
Confidence            9999986432 25567899999999999999999999999999987531 379999999876421               


Q ss_pred             --------------------CCCCchhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcc-cCcccccccCCChHHHHh
Q 041914          160 --------------------GKRRTDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGL-ATPLTCHAYGMPADEVEK  217 (264)
Q Consensus       160 --------------------~~~~~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~  217 (264)
                                          .+++..|++||+|+..+++.+++++.+ .||+|++|+||++ .|+|....... ......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-~~~~~~  237 (308)
T PLN00015        159 RGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPL-FRLLFP  237 (308)
T ss_pred             hhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHH-HHHHHH
Confidence                                124567999999999999999999975 6999999999999 78887542111 000000


Q ss_pred             hcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          218 LFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       218 ~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      .+ ...+. +++.+||+.|+.+++++++.....+|+++..||+
T Consensus       238 ~~-~~~~~-~~~~~pe~~a~~~~~l~~~~~~~~~G~~~~~~g~  278 (308)
T PLN00015        238 PF-QKYIT-KGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNGG  278 (308)
T ss_pred             HH-HHHHh-cccccHHHhhhhhhhhccccccCCCccccccCCc
Confidence            00 11122 4678999999999999988777899999998886

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=3.9e-35  Score=241.56  Aligned_cols=234  Identities=22%  Similarity=0.350  Sum_probs=198.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCC--CHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVT--NECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s--~~~~~~~~~~~~~~   87 (264)
                      .+++|+++|||++++||.+++++|+++|++|+++.|+.++..+...+...  ..++.++.+|++  +.+++.++++.+.+
T Consensus         9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~   88 (247)
T PRK08945          9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEE   88 (247)
T ss_pred             ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHH
Confidence            46899999999999999999999999999999888887654433332222  235667777875  78999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||..... .++.+.+.+.|++.+++|+.+++.+++.++|+|.+++ .++||++||..+..+.+++..|+
T Consensus        89 ~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~-~~~iv~~ss~~~~~~~~~~~~Y~  166 (247)
T PRK08945         89 QFGRLDGVLHNAGLLGEL-GPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSP-AASLVFTSSSVGRQGRANWGAYA  166 (247)
T ss_pred             HhCCCCEEEECCcccCCC-CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEEccHhhcCCCCCCcccH
Confidence            999999999999986543 3677888999999999999999999999999998876 68999999999998889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|++++.+++.++.++...||++++++||+++|++......           . ... .++.+|+|+++.+.+++++..
T Consensus       167 ~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~~~-----------~-~~~-~~~~~~~~~~~~~~~~~~~~~  233 (247)
T PRK08945        167 VSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASAFP-----------G-EDP-QKLKTPEDIMPLYLYLMGDDS  233 (247)
T ss_pred             HHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhhcC-----------c-ccc-cCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999987532211           0 111 457799999999999999889


Q ss_pred             CCeeccEEEecCe
Q 041914          248 EFVTGHDLVVDGG  260 (264)
Q Consensus       248 ~~~~G~~i~~dgG  260 (264)
                      .+++|+++...-|
T Consensus       234 ~~~~g~~~~~~~~  246 (247)
T PRK08945        234 RRKNGQSFDAQPG  246 (247)
T ss_pred             cccCCeEEeCCCC
Confidence            9999999887644

>PLN02780 ketoreductase/ oxidoreductase

Probab=100.00  E-value=2.3e-35  Score=251.19  Aligned_cols=212  Identities=20%  Similarity=0.245  Sum_probs=170.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .|++++||||++|||+++|++|+++|++|++++|+.++..+...+...   ..++..+.+|+++  ++.+.++++.+.++
T Consensus        52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~~  129 (320)
T PLN02780         52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETIE  129 (320)
T ss_pred             cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHhc
Confidence            589999999999999999999999999999988887665443332221   2367889999985  22333444444433


Q ss_pred             --CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-C-CCCCchh
Q 041914           91 --QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-G-GKRRTDY  166 (264)
Q Consensus        91 --~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~-~~~~~~y  166 (264)
                        ++|++|||||+......++.+.+.+++++.+++|+.+++.+++.++|.|.+++ .|+||++||..+.. + .|....|
T Consensus       130 ~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~a~~~~~~~p~~~~Y  208 (320)
T PLN02780        130 GLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRK-KGAIINIGSGAAIVIPSDPLYAVY  208 (320)
T ss_pred             CCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCccchHH
Confidence              56799999998754333678899999999999999999999999999998877 79999999999864 3 5788999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ++||+++++|+++++.|++++||+|++|+||+++|+|.....            ..    -...+||++|+.++..+.
T Consensus       209 ~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~~------------~~----~~~~~p~~~A~~~~~~~~  270 (320)
T PLN02780        209 AATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIRR------------SS----FLVPSSDGYARAALRWVG  270 (320)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccccC------------CC----CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999864110            00    113589999999998875

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=100.00  E-value=9.5e-35  Score=239.76  Aligned_cols=242  Identities=37%  Similarity=0.580  Sum_probs=198.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhC-C--CcEEEEEecCCC-HHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIG-V--GKCHYVHCDVTN-ECQVKALVDSTV   86 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~-~--~~~~~~~~D~s~-~~~~~~~~~~~~   86 (264)
                      .+.+|++|||||++|||+++|+.|+++|+.|+++.++.+. ..+.+.+... .  ..+.+.++|+++ .++++.+++.+.
T Consensus         2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~   81 (251)
T COG1028           2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAE   81 (251)
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHH
Confidence            4678999999999999999999999999998888887664 2222222211 1  257788899998 999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC-ch
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR-TD  165 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~-~~  165 (264)
                      +.+|++|++|||||+.... .++.+.+.++|++++++|+.+++.+++.+.|.+++   . +||++||..+. +.++. ..
T Consensus        82 ~~~g~id~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~---~-~Iv~isS~~~~-~~~~~~~~  155 (251)
T COG1028          82 EEFGRIDILVNNAGIAGPD-APLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK---Q-RIVNISSVAGL-GGPPGQAA  155 (251)
T ss_pred             HHcCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh---C-eEEEECCchhc-CCCCCcch
Confidence            9999999999999997652 27888999999999999999999999988888883   4 99999999999 87774 99


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+++|++.++.|++++||++++|+||++.|++........... ........+. .++..|+++++.+.++.+.
T Consensus       156 Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  233 (251)
T COG1028         156 YAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAELEA-LKRLAARIPL-GRLGTPEEVAAAVAFLASD  233 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCcchhhhhhhhhhH-HHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999886543221000 1111111143 4788999999999999876


Q ss_pred             C-CCCeeccEEEecCee
Q 041914          246 D-SEFVTGHDLVVDGGF  261 (264)
Q Consensus       246 ~-~~~~~G~~i~~dgG~  261 (264)
                      . ..+++|+.+.+|||+
T Consensus       234 ~~~~~~~g~~~~~~~~~  250 (251)
T COG1028         234 EAASYITGQTLPVDGGL  250 (251)
T ss_pred             chhccccCCEEEeCCCC
Confidence            4 778999999999986

>PRK05993 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.8e-35  Score=246.44  Aligned_cols=224  Identities=24%  Similarity=0.306  Sum_probs=183.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~id   93 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.+... .+.+    ..+.++.+|++|.++++++++++.+.+ +++|
T Consensus         4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~-~l~~----~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id   78 (277)
T PRK05993          4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVA-ALEA----EGLEAFQLDYAEPESIAALVAQVLELSGGRLD   78 (277)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH----CCceEEEccCCCHHHHHHHHHHHHHHcCCCcc
Confidence            589999999999999999999999999888888765542 2222    246789999999999999999997766 6899


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||||.....  ++.+.+.+++++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++||+++
T Consensus        79 ~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~a~  155 (277)
T PRK05993         79 ALFNNGAYGQPG--AVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQG-QGRIVQCSSILGLVPMKYRGAYNASKFAI  155 (277)
T ss_pred             EEEECCCcCCCC--CcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcC-CCEEEEECChhhcCCCCccchHHHHHHHH
Confidence            999999987654  788899999999999999999999999999999877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---------Ch--HHH---HhhcCCCCCCCCCCCChHHHHHHH
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---------PA--DEV---EKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~--~~~---~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      ++|+++++.|++++||+|++|+||+++|++.......         ..  +..   ...............+||++++.+
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~i  235 (277)
T PRK05993        156 EGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEGGGSKSRFKLGPEAVYAVL  235 (277)
T ss_pred             HHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHhhhhccccCCCHHHHHHHH
Confidence            9999999999999999999999999999987532110         00  000   000111111112356899999999


Q ss_pred             HHHhCCC
Q 041914          240 LFLACRD  246 (264)
Q Consensus       240 ~~l~s~~  246 (264)
                      +..+.++
T Consensus       236 ~~a~~~~  242 (277)
T PRK05993        236 LHALTAP  242 (277)
T ss_pred             HHHHcCC
Confidence            9988654

>PRK05855 short chain dehydrogenase; Validated

Probab=100.00  E-value=4.2e-35  Score=268.94  Aligned_cols=234  Identities=26%  Similarity=0.302  Sum_probs=192.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..+.++++|||||++|||++++++|+++|++|++++|+.++..+...+... ..++.++++|++|++++.++++++.+.+
T Consensus       311 ~~~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  390 (582)
T PRK05855        311 GPFSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEH  390 (582)
T ss_pred             ccCCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhc
Confidence            456789999999999999999999999999988888876554333222221 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|.+++..|+||++||..+..+.++...|++|
T Consensus       391 g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~s  468 (582)
T PRK05855        391 GVPDIVVNNAGIGMAG--GFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATS  468 (582)
T ss_pred             CCCcEEEECCccCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHH
Confidence            9999999999987654  78889999999999999999999999999999886535899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHH--hhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVE--KLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++++|+++++.|++++||+|++|+||+++|+|.......  ..+...  .......+. .+..+|||+|+.+++.+..
T Consensus       469 Kaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~va~~~~~~~~~  547 (582)
T PRK05855        469 KAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQ-RRGYGPEKVAKAIVDAVKR  547 (582)
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhcc-ccCCCHHHHHHHHHHHHHc
Confidence            99999999999999999999999999999999987643211  111100  001111112 3456899999999999975


Q ss_pred             CC
Q 041914          246 DS  247 (264)
Q Consensus       246 ~~  247 (264)
                      ..
T Consensus       548 ~~  549 (582)
T PRK05855        548 NK  549 (582)
T ss_pred             CC
Confidence            43

>PRK07454 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=237.95  Aligned_cols=226  Identities=25%  Similarity=0.337  Sum_probs=190.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++|+++||||+++||++++++|+++|++|+++.|+.++..+ +.+...  ..++.++.+|+++.+++.++++++.+++++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEA-LAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGC   83 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35899999999999999999999999998888887655433 322221  246889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.+++++.+++|+.+++.+++.++|+|.+++ .++||++||..+..+.+++..|+.+|+
T Consensus        84 id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (241)
T PRK07454         84 PDVLINNAGMAYTG--PLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARG-GGLIINVSSIAARNAFPQWGAYCVSKA  160 (241)
T ss_pred             CCEEEECCCccCCC--chhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCcCCCCccHHHHHHH
Confidence            99999999987654  677889999999999999999999999999998876 689999999999989899999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +++.+++.++.++++.||++++|.||+++|++.....      ..    ..... .+..+|+|+|+.+++|++++...+.
T Consensus       161 ~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~~------~~----~~~~~-~~~~~~~~va~~~~~l~~~~~~~~~  229 (241)
T PRK07454        161 ALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTET------VQ----ADFDR-SAMLSPEQVAQTILHLAQLPPSAVI  229 (241)
T ss_pred             HHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccccc------cc----ccccc-ccCCCHHHHHHHHHHHHcCCcccee
Confidence            9999999999999999999999999999999853210      00    00111 3567999999999999987766665


Q ss_pred             ccE
Q 041914          252 GHD  254 (264)
Q Consensus       252 G~~  254 (264)
                      +..
T Consensus       230 ~~~  232 (241)
T PRK07454        230 EDL  232 (241)
T ss_pred             eeE
Confidence            543

>PRK06180 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-35  Score=243.27  Aligned_cols=227  Identities=22%  Similarity=0.228  Sum_probs=187.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|++|||||+||||++++++|+++|++|+++.|+.++.. .+.+.. ..++.++.+|++|.+++.++++++.+.++++|
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~-~l~~~~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d   80 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARA-DFEALH-PDRALARLLDVTDFDAIDAVVADAEATFGPID   80 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHH-HHHhhc-CCCeeEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999999999999999999999999988888765542 222221 23678899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||||.....  ++.+.+.++|++++++|+.+++++++.++|+|++++ .++||++||..+..+.+++..|+++|+++
T Consensus        81 ~vv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~  157 (277)
T PRK06180         81 VLVNNAGYGHEG--AIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARR-RGHIVNITSMGGLITMPGIGYYCGSKFAL  157 (277)
T ss_pred             EEEECCCccCCc--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccC-CCEEEEEecccccCCCCCcchhHHHHHHH
Confidence            999999987554  788899999999999999999999999999998876 68999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---ChHHHHh---h---cCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---PADEVEK---L---FEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~---~---~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +.+++.++.|+++.||++++|+||++.|++.......   ..++...   .   .....+. .++.+|+|+++++++++.
T Consensus       158 ~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~~l~  236 (277)
T PRK06180        158 EGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSG-KQPGDPAKAAQAILAAVE  236 (277)
T ss_pred             HHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhcc-CCCCCHHHHHHHHHHHHc
Confidence            9999999999999999999999999999875422111   1111111   0   0011122 557799999999999986


Q ss_pred             CC
Q 041914          245 RD  246 (264)
Q Consensus       245 ~~  246 (264)
                      ..
T Consensus       237 ~~  238 (277)
T PRK06180        237 SD  238 (277)
T ss_pred             CC
Confidence            54

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=100.00  E-value=1.8e-34  Score=238.39  Aligned_cols=244  Identities=30%  Similarity=0.486  Sum_probs=201.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||+++||++++++|+++|++|+++.|+.+...+ +.+...  ..++.++.+|++|.+++.++++++.+.++++
T Consensus         1 ~~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   79 (255)
T TIGR01963         1 GKTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEA-AAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGL   79 (255)
T ss_pred             CCEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4789999999999999999999999998888887655433 333321  2468899999999999999999999988999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |++|||++.....  +..+.+.++++++++.|+.+++.+++.++|.|++.+ .+++|++||..+..+.+.+..|+.+|++
T Consensus        80 d~vi~~a~~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~~~~~~y~~sk~a  156 (255)
T TIGR01963        80 DILVNNAGIQHVA--PIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG-WGRIINIASAHGLVASPFKSAYVAAKHG  156 (255)
T ss_pred             CEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CeEEEEEcchhhcCCCCCCchhHHHHHH
Confidence            9999999987543  566778999999999999999999999999998776 6799999999888888899999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHH-HHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADE-VEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ++.+++.++.++.+.+|+++.++||.+.+++......       ..... ....+....+. +.+++++|++++++++++
T Consensus       157 ~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~a~~~~~~~~  235 (255)
T TIGR01963       157 LIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPT-KRFVTVDEVAETALFLAS  235 (255)
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCcc-ccCcCHHHHHHHHHHHcC
Confidence            9999999999998889999999999999987532210       11111 11112223333 568999999999999998


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +....++|+++.+|||+..
T Consensus       236 ~~~~~~~g~~~~~~~g~~~  254 (255)
T TIGR01963       236 DAAAGITGQAIVLDGGWTA  254 (255)
T ss_pred             ccccCccceEEEEcCcccc
Confidence            7667889999999999853

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=100.00  E-value=1.9e-34  Score=237.68  Aligned_cols=231  Identities=20%  Similarity=0.305  Sum_probs=188.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++++||||++|||.++++.|+++|++|+++.|+.++... +.+... .++.++++|++|.+++.++++++.+.++++|++
T Consensus         1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   78 (248)
T PRK10538          1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQE-LKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVL   78 (248)
T ss_pred             CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhc-cceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            468999999999999999999999999888887655433 333222 367889999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||+|..... .++.+.+.++|++++++|+.+++.+++.++|.|++.+ .+++|++||..+..+.++...|+++|+++++
T Consensus        79 i~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~  156 (248)
T PRK10538         79 VNNAGLALGL-EPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_pred             EECCCccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEECCcccCCCCCCCchhHHHHHHHHH
Confidence            9999975422 2667789999999999999999999999999998876 6899999999998888899999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccc-cCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccE
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHA-YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD  254 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~  254 (264)
                      |++.++.++.+++|++++|.||++.+++.... ...........+..     ...++|+|+|++++++++....+.+++.
T Consensus       157 ~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~dvA~~~~~l~~~~~~~~~~~~  231 (248)
T PRK10538        157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQN-----TVALTPEDVSEAVWWVATLPAHVNINTL  231 (248)
T ss_pred             HHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHhhccc-----cCCCCHHHHHHHHHHHhcCCCcccchhh
Confidence            99999999999999999999999985554322 11111111111111     2346999999999999987766766665


Q ss_pred             E
Q 041914          255 L  255 (264)
Q Consensus       255 i  255 (264)
                      .
T Consensus       232 ~  232 (248)
T PRK10538        232 E  232 (248)
T ss_pred             c
Confidence            4

>PRK05866 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1e-34  Score=244.75  Aligned_cols=220  Identities=25%  Similarity=0.327  Sum_probs=181.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++++|+++||||++|||+++|++|+++|++|++++|+.+...+...+... ..++.++++|++|.+++.++++++.+.
T Consensus        35 ~~~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  114 (293)
T PRK05866         35 PVDLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKR  114 (293)
T ss_pred             CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            4567899999999999999999999999999998888876554332222221 246789999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCC--CHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-CCCCCch
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDL--DFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-GGKRRTD  165 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~~~~~~~  165 (264)
                      ++++|++|||||+....  ++.+.  +++++++.+++|+.+++.+++.++|.|++++ .++||++||..+.. +.++...
T Consensus       115 ~g~id~li~~AG~~~~~--~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~p~~~~  191 (293)
T PRK05866        115 IGGVDILINNAGRSIRR--PLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERG-DGHIINVATWGVLSEASPLFSV  191 (293)
T ss_pred             cCCCCEEEECCCCCCCc--chhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCCcch
Confidence            99999999999987554  44432  4688999999999999999999999998877 78999999987654 4677889


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++|+|+++|+++++.|++++||++++++||+++|++......         .. .    ....+||++|+.++..+..
T Consensus       192 Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~~~---------~~-~----~~~~~pe~vA~~~~~~~~~  257 (293)
T PRK05866        192 YNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPTKA---------YD-G----LPALTADEAAEWMVTAART  257 (293)
T ss_pred             HHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccccc---------cc-C----CCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999999999999999999999998642110         00 0    1246999999999998854


Q ss_pred             C
Q 041914          246 D  246 (264)
Q Consensus       246 ~  246 (264)
                      .
T Consensus       258 ~  258 (293)
T PRK05866        258 R  258 (293)
T ss_pred             C
Confidence            3

>PRK07024 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=240.25  Aligned_cols=215  Identities=29%  Similarity=0.364  Sum_probs=181.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +|++|||||++|||.+++++|+++|++|+++.|+.+... .+.+.... .++.++++|++|.+++.++++++.++++.+|
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id   80 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQ-AFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD   80 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence            479999999999999999999999999888888765543 33333322 2688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|..... ....+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|++||+++
T Consensus        81 ~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~asK~a~  158 (257)
T PRK07024         81 VVIANAGISVGT-LTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAAR-RGTLVGIASVAGVRGLPGAGAYSASKAAA  158 (257)
T ss_pred             EEEECCCcCCCc-cccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCCcchHHHHHHH
Confidence            999999986533 1333378899999999999999999999999998877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +.|++.++.|++++||++++++||+++|++.....              .+. ....+|+++++.++..+.+..
T Consensus       159 ~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~--------------~~~-~~~~~~~~~a~~~~~~l~~~~  217 (257)
T PRK07024        159 IKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHNP--------------YPM-PFLMDADRFAARAARAIARGR  217 (257)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCCCcCchhhcCC--------------CCC-CCccCHHHHHHHHHHHHhCCC
Confidence            99999999999999999999999999998753210              011 224689999999999886543

>PRK05650 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.1e-34  Score=242.06  Aligned_cols=223  Identities=25%  Similarity=0.334  Sum_probs=187.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      |+++||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|++++..+++++.++++++|+
T Consensus         1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~   80 (270)
T PRK05650          1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV   80 (270)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5799999999999999999999999988888876654443333322 246888999999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      ||||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|++++
T Consensus        81 lI~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~  157 (270)
T PRK05650         81 IVNNAGVASGG--FFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQK-SGRIVNIASMAGLMQGPAMSSYNVAKAGVV  157 (270)
T ss_pred             EEECCCCCCCC--CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCC-CCEEEEECChhhcCCCCCchHHHHHHHHHH
Confidence            99999987654  778889999999999999999999999999998876 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChH--HHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +|+++++.|+.+.||++++|+||+++|++..........  ........     ...++++|+|+.++..+.+.
T Consensus       158 ~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~vA~~i~~~l~~~  226 (270)
T PRK05650        158 ALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLE-----KSPITAADIADYIYQQVAKG  226 (270)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhh-----cCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999987654322111  11111111     33468999999999988643

>PRK07806 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-35  Score=242.13  Aligned_cols=236  Identities=23%  Similarity=0.248  Sum_probs=186.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.+|+++||||++|||++++++|+++|++|+++.|+..+..+.+...+.  ..++.++++|++|++++.++++++.+.+
T Consensus         3 ~~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (248)
T PRK07806          3 DLPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEF   82 (248)
T ss_pred             CCCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence            46789999999999999999999999999988888865433333332221  2367889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----CCCCCCc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----CGGKRRT  164 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----~~~~~~~  164 (264)
                      +++|++|||+|.....     +.   +++..+++|+.+++++++.+.|+|.+   .+++|++||..+.     .+.+.+.
T Consensus        83 ~~~d~vi~~ag~~~~~-----~~---~~~~~~~vn~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~~~~~  151 (248)
T PRK07806         83 GGLDALVLNASGGMES-----GM---DEDYAMRLNRDAQRNLARAALPLMPA---GSRVVFVTSHQAHFIPTVKTMPEYE  151 (248)
T ss_pred             CCCcEEEECCCCCCCC-----CC---CcceeeEeeeHHHHHHHHHHHhhccC---CceEEEEeCchhhcCccccCCcccc
Confidence            9999999999864321     11   25678999999999999999999864   4699999996543     2335567


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+.+|++++.+++.++.++++.||++++|.||++.|++.........+.....  ...|. +++.+|+|++++++++++
T Consensus       152 ~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~dva~~~~~l~~  228 (248)
T PRK07806        152 PVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEA--RREAA-GKLYTVSEFAAEVARAVT  228 (248)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHH--HHhhh-cccCCHHHHHHHHHHHhh
Confidence            899999999999999999999999999999999999986543221111111111  12344 689999999999999996


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                        ..+++|++|.++||..+
T Consensus       229 --~~~~~g~~~~i~~~~~~  245 (248)
T PRK07806        229 --APVPSGHIEYVGGADYF  245 (248)
T ss_pred             --ccccCccEEEecCccce
Confidence              55889999999998653

>PRK05854 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.5e-35  Score=247.09  Aligned_cols=243  Identities=21%  Similarity=0.197  Sum_probs=185.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+.+++||+++||||++|||++++++|+++|++|++++|+.++..+...+..   ...++.++++|++|.++++++++++
T Consensus         8 ~~~~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~   87 (313)
T PRK05854          8 TVPDLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQL   87 (313)
T ss_pred             cCcccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHH
Confidence            3567899999999999999999999999999999888888765544433332   2246889999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------  159 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------  159 (264)
                      .+.++++|+||||||+...   +..+.+.++|+..+++|+.+++.+++.++|.|++.  .++||++||..+..+      
T Consensus        88 ~~~~~~iD~li~nAG~~~~---~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~~~~~~~~~  162 (313)
T PRK05854         88 RAEGRPIHLLINNAGVMTP---PERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAARRGAINWDD  162 (313)
T ss_pred             HHhCCCccEEEECCccccC---CccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhcCCCcCccc
Confidence            9999999999999998653   33456788999999999999999999999999764  479999999977543      


Q ss_pred             ------CCCCchhhchHHHHHHHHHHHHHHh--CcCCceEEEeeCCcccCcccccccCC--ChHHHH-hhcCCCCCCCCC
Q 041914          160 ------GKRRTDYHMSKHAVIGLVRSASVQL--GVHGIRVNCVSPHGLATPLTCHAYGM--PADEVE-KLFEPQTPLEGV  228 (264)
Q Consensus       160 ------~~~~~~y~~sK~al~~~~~~la~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~-~~~~~~~~~~~~  228 (264)
                            .+++..|+.||+|+..|++.++.++  .+.||+||+++||++.|++.......  ...... ..+.........
T Consensus       163 ~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (313)
T PRK05854        163 LNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTNLLAARPEVGRDKDTLMVRLIRSLSARGFL  242 (313)
T ss_pred             ccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccCccccccccccchhHHHHHHHHHHhhcccc
Confidence                  2456789999999999999999864  46789999999999999987542110  001111 111100000012


Q ss_pred             CCChHHHHHHHHHHhCCCCCCeeccEEEe
Q 041914          229 VLRAGHVADAVLFLACRDSEFVTGHDLVV  257 (264)
Q Consensus       229 ~~~~edva~~~~~l~s~~~~~~~G~~i~~  257 (264)
                      +.++++.+...++++.... ..+|..+.-
T Consensus       243 ~~~~~~ga~~~l~~a~~~~-~~~g~~~~~  270 (313)
T PRK05854        243 VGTVESAILPALYAATSPD-AEGGAFYGP  270 (313)
T ss_pred             cCCHHHHHHHhhheeeCCC-CCCCcEECC
Confidence            3488888998988875322 224666543

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=100.00  E-value=3.3e-34  Score=234.55  Aligned_cols=237  Identities=31%  Similarity=0.497  Sum_probs=199.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +||||++++||.+++++|+++|++|+++.|+..+......+...  ..+++++.+|++|.++++++++++.++++++|++
T Consensus         1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (239)
T TIGR01830         1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL   80 (239)
T ss_pred             CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            58999999999999999999999988888876433333322222  2368899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      ||++|.....  ++.+.+.+.+++.+++|+.+++.+++.+.+.+.+.+ .++++++||..+..+.+.+..|+++|++++.
T Consensus        81 i~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~  157 (239)
T TIGR01830        81 VNNAGITRDN--LLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQR-SGRIINISSVVGLMGNAGQANYAASKAGVIG  157 (239)
T ss_pred             EECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEECCccccCCCCCCchhHHHHHHHHH
Confidence            9999986543  567788899999999999999999999999997765 6899999999988888999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEE
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL  255 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i  255 (264)
                      +++.++.++...|++++.+.||++.|++....   . ......+....|. .++.+++|+++.+++++.+...+++|+.+
T Consensus       158 ~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~g~~~  232 (239)
T TIGR01830       158 FTKSLAKELASRNITVNAVAPGFIDTDMTDKL---S-EKVKKKILSQIPL-GRFGTPEEVANAVAFLASDEASYITGQVI  232 (239)
T ss_pred             HHHHHHHHHhhcCeEEEEEEECCCCChhhhhc---C-hHHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCcccCCcCCCEE
Confidence            99999999998999999999999999875432   1 2222222334444 67889999999999999877788999999


Q ss_pred             EecCeee
Q 041914          256 VVDGGFL  262 (264)
Q Consensus       256 ~~dgG~~  262 (264)
                      ++|+|++
T Consensus       233 ~~~~g~~  239 (239)
T TIGR01830       233 HVDGGMY  239 (239)
T ss_pred             EeCCCcC
Confidence            9999974

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06194 hypothetical protein; Provisional

Probab=100.00  E-value=2.2e-34  Score=242.16  Aligned_cols=233  Identities=27%  Similarity=0.380  Sum_probs=186.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++|.++++++++.+.+.+
T Consensus         2 ~~~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~   81 (287)
T PRK06194          2 KDFAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF   81 (287)
T ss_pred             cCCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            356789999999999999999999999999988888765544333333222 2368889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCC-----cEEEEecCCCCCCCCCCCc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVR-----GSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~-----~~iv~iss~~~~~~~~~~~  164 (264)
                      +++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.++...     ++||++||..+..+.++..
T Consensus        82 g~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~  159 (287)
T PRK06194         82 GAVHLLFNNAGVGAGG--LVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMG  159 (287)
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCc
Confidence            9999999999997654  77888999999999999999999999999999876522     7999999999999989999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCc--CCceEEEeeCCcccCcccccccCCChHH-----------HHhhcCCCCCCCCCCCC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGV--HGIRVNCVSPHGLATPLTCHAYGMPADE-----------VEKLFEPQTPLEGVVLR  231 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~  231 (264)
                      .|+++|++++.|++.++.+++.  .+|+++++.||++.|++.......+...           ........... ....+
T Consensus       160 ~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s  238 (287)
T PRK06194        160 IYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIAQAMSQKAVG-SGKVT  238 (287)
T ss_pred             chHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHHHHHHHhhhh-ccCCC
Confidence            9999999999999999999874  5699999999999999875432111100           00000000000 12369


Q ss_pred             hHHHHHHHHHHhCCC
Q 041914          232 AGHVADAVLFLACRD  246 (264)
Q Consensus       232 ~edva~~~~~l~s~~  246 (264)
                      ++|+|+.++.++.+.
T Consensus       239 ~~dva~~i~~~~~~~  253 (287)
T PRK06194        239 AEEVAQLVFDAIRAG  253 (287)
T ss_pred             HHHHHHHHHHHHHcC
Confidence            999999999987544

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.3e-36  Score=224.03  Aligned_cols=243  Identities=30%  Similarity=0.464  Sum_probs=209.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .+|-+.||||+.+|+|++.+++|+++|++|+++.-.+.+.... ..++. +++.|.+.|+++++++..+++..+.+||++
T Consensus         7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~v-akelg-~~~vf~padvtsekdv~aala~ak~kfgrl   84 (260)
T KOG1199|consen    7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADV-AKELG-GKVVFTPADVTSEKDVRAALAKAKAKFGRL   84 (260)
T ss_pred             hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHH-HHHhC-CceEEeccccCcHHHHHHHHHHHHhhccce
Confidence            4788999999999999999999999999977766555544333 33333 378999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCC----CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----CCCcEEEEecCCCCCCCCCCC
Q 041914           93 DIMFSNAGILSSSD----QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-----GVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        93 d~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~~~~iv~iss~~~~~~~~~~  163 (264)
                      |.+|||||+.....    +.-...+.|+|++.+++|+.++|+.++...-.|-++     +.+|.||+..|+.++.+.-+.
T Consensus        85 d~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq  164 (260)
T KOG1199|consen   85 DALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ  164 (260)
T ss_pred             eeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch
Confidence            99999999765431    133346889999999999999999999999888754     236899999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      .+|++||.++.+|+.-+++.++..|||++.|.||.++||+....    ++....++....|...|+..|.|.++.+-.+.
T Consensus       165 aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllssl----pekv~~fla~~ipfpsrlg~p~eyahlvqaii  240 (260)
T KOG1199|consen  165 AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSL----PEKVKSFLAQLIPFPSRLGHPHEYAHLVQAII  240 (260)
T ss_pred             hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhh----hHHHHHHHHHhCCCchhcCChHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998644    45556666677787789999999999999998


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                        +..++||++|.+||-.-|
T Consensus       241 --enp~lngevir~dgalrm  258 (260)
T KOG1199|consen  241 --ENPYLNGEVIRFDGALRM  258 (260)
T ss_pred             --hCcccCCeEEEecceecC
Confidence              688999999999997644

>PRK09072 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.1e-34  Score=238.43  Aligned_cols=221  Identities=24%  Similarity=0.352  Sum_probs=186.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++++++|||||++|||++++++|+++|++|++++|+.++..+...+.....++.++++|++|.+++..+++.+.+ +++
T Consensus         2 ~~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~-~~~   80 (263)
T PRK09072          2 DLKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE-MGG   80 (263)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh-cCC
Confidence            4678999999999999999999999999999888887665443333321234788999999999999999999876 789


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.+++++.+++|+.+++.+++.++|+|.+++ .+++|+++|..+..+.++...|+.+|+
T Consensus        81 id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  157 (263)
T PRK09072         81 INVLINNAGVNHFA--LLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQP-SAMVVNVGSTFGSIGYPGYASYCASKF  157 (263)
T ss_pred             CCEEEECCCCCCcc--ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEecChhhCcCCCCccHHHHHHH
Confidence            99999999986543  778889999999999999999999999999998876 689999999999989899999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++.++++.++.++.+.||+|++++||+++|++.....        .....  ....+..+|+|+|+.+++++...
T Consensus       158 a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~~--------~~~~~--~~~~~~~~~~~va~~i~~~~~~~  222 (263)
T PRK09072        158 ALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEAV--------QALNR--ALGNAMDDPEDVAAAVLQAIEKE  222 (263)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEecCcccccchhhhc--------ccccc--cccCCCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999998754221        01110  11135679999999999999654

>PRK06914 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-34  Score=241.09  Aligned_cols=241  Identities=21%  Similarity=0.271  Sum_probs=193.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+|++|||||+++||+++++.|+++|++|++++|+.+.......+...   ..++.++.+|++|+++++. ++++.+.++
T Consensus         2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~   80 (280)
T PRK06914          2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG   80 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence            578999999999999999999999999988888876554333222211   2468899999999999999 999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|...+.  .+.+.+.+++++.+++|+.+++.+++.++|.|++.+ .+++|++||..+..+.++...|+.+|
T Consensus        81 ~id~vv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~vsS~~~~~~~~~~~~Y~~sK  157 (280)
T PRK06914         81 RIDLLVNNAGYANGG--FVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQK-SGKIINISSISGRVGFPGLSPYVSSK  157 (280)
T ss_pred             CeeEEEECCcccccC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEECcccccCCCCCCchhHHhH
Confidence            999999999987654  677889999999999999999999999999998876 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---------ChHHHHhhcCC--CCCCCCCCCChHHHHHHH
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---------PADEVEKLFEP--QTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~edva~~~  239 (264)
                      ++++.|+++++.+++++||+++.++||+++|++.......         ...........  ..+. +++.+|+|+|+++
T Consensus       158 ~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~  236 (280)
T PRK06914        158 YALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGS-DTFGNPIDVANLI  236 (280)
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhh-hccCCHHHHHHHH
Confidence            9999999999999999999999999999999976432110         00011111000  1122 5678999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++++++....   ..+.++.|..
T Consensus       237 ~~~~~~~~~~---~~~~~~~~~~  256 (280)
T PRK06914        237 VEIAESKRPK---LRYPIGKGVK  256 (280)
T ss_pred             HHHHcCCCCC---cccccCCchH
Confidence            9999755332   3567665543

>PRK07775 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.7e-34  Score=237.41  Aligned_cols=231  Identities=21%  Similarity=0.246  Sum_probs=187.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+|+++||||+++||++++++|+++|++|+++.|+.+...+...+... ..++.++++|+++.+++.++++++.+.++
T Consensus         7 ~~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   86 (274)
T PRK07775          7 HPDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALG   86 (274)
T ss_pred             CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46678999999999999999999999999988888876544332222211 24688899999999999999999999899


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|.....  +..+.++++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|+.+|
T Consensus        87 ~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  163 (274)
T PRK07775         87 EIEVLVSGAGDTYFG--KLHEISTEQFESQVQIHLVGANRLATAVLPGMIERR-RGDLIFVGSDVALRQRPHMGAYGAAK  163 (274)
T ss_pred             CCCEEEECCCcCCCc--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCCcchHHHHH
Confidence            999999999986554  677789999999999999999999999999998766 68999999999988888889999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC--CCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++++.+++.++.++.+.||++++++||+++|++.................  ..... +++++++|+|++++++++..
T Consensus       164 ~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~~~~~~~  240 (274)
T PRK07775        164 AGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARH-DYFLRASDLARAITFVAETP  240 (274)
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhccccc-ccccCHHHHHHHHHHHhcCC
Confidence            99999999999999989999999999999998643221110111111111  11122 56899999999999999753

>PRK06197 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-34  Score=245.32  Aligned_cols=241  Identities=21%  Similarity=0.196  Sum_probs=186.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+.++++|++|||||++|||+++|++|+++|++|+++.|+.++..+...+..   ...++.++++|++|.++++++++++
T Consensus        10 ~~~~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~   89 (306)
T PRK06197         10 DIPDQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADAL   89 (306)
T ss_pred             ccccCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            3568899999999999999999999999999998888887665443332222   1246889999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-------
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-------  158 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-------  158 (264)
                      .++++++|+||||||+....    .+.+.++++..+++|+.+++.+++.++|.|++.+ .++||++||..+..       
T Consensus        90 ~~~~~~iD~li~nAg~~~~~----~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~-~~~iV~vSS~~~~~~~~~~~~  164 (306)
T PRK06197         90 RAAYPRIDLLINNAGVMYTP----KQTTADGFELQFGTNHLGHFALTGLLLDRLLPVP-GSRVVTVSSGGHRIRAAIHFD  164 (306)
T ss_pred             HhhCCCCCEEEECCccccCC----CccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCC-CCEEEEECCHHHhccCCCCcc
Confidence            99999999999999986432    3456778999999999999999999999998866 68999999986432       


Q ss_pred             ------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEe--eCCcccCcccccccCCChHHHHhhcCCCCCCCCCCC
Q 041914          159 ------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV--SPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL  230 (264)
Q Consensus       159 ------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v--~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (264)
                            +.++...|+.||++++.|++.++.++++.|++++++  +||+++|++....... .......+.   |  ....
T Consensus       165 ~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~-~~~~~~~~~---~--~~~~  238 (306)
T PRK06197        165 DLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRA-LRPVATVLA---P--LLAQ  238 (306)
T ss_pred             ccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHH-HHHHHHHHH---h--hhcC
Confidence                  234567899999999999999999999888877765  6999999987643211 111111111   1  1124


Q ss_pred             ChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ++++-+..+++++. +....+|..+..||+.
T Consensus       239 ~~~~g~~~~~~~~~-~~~~~~g~~~~~~~~~  268 (306)
T PRK06197        239 SPEMGALPTLRAAT-DPAVRGGQYYGPDGFG  268 (306)
T ss_pred             CHHHHHHHHHHHhc-CCCcCCCeEEccCccc
Confidence            66766666776665 4456789888877653

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=8.1e-34  Score=232.58  Aligned_cols=222  Identities=26%  Similarity=0.390  Sum_probs=188.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |.++++++++|||++++||++++++|+++|++|+++.|+.++..+...+... ..++.++++|+++++++.++++++.++
T Consensus         2 ~~~~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   81 (239)
T PRK07666          2 AQSLQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNE   81 (239)
T ss_pred             CccCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHH
Confidence            3457789999999999999999999999999988888876654333222221 236888999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|++|||+|.....  ++.+.++++|++.+++|+.+++.+++.+.|.|.+++ .+++|++||..+..+.++...|+.
T Consensus        82 ~~~id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~  158 (239)
T PRK07666         82 LGSIDILINNAGISKFG--KFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQ-SGDIINISSTAGQKGAAVTSAYSA  158 (239)
T ss_pred             cCCccEEEEcCccccCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEEcchhhccCCCCCcchHH
Confidence            99999999999986543  677889999999999999999999999999998876 689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +|++++.+++.++.|+++.||+++.|.||++.|++......          ....+  ..+.+++|+++.+..+++..
T Consensus       159 sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~~~----------~~~~~--~~~~~~~~~a~~~~~~l~~~  224 (239)
T PRK07666        159 SKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDLGL----------TDGNP--DKVMQPEDLAEFIVAQLKLN  224 (239)
T ss_pred             HHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhccc----------cccCC--CCCCCHHHHHHHHHHHHhCC
Confidence            99999999999999999999999999999999997542210          00111  45679999999999998654

>PRK06179 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.7e-34  Score=237.64  Aligned_cols=222  Identities=27%  Similarity=0.324  Sum_probs=185.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++++++||||+||||++++++|+++|++|+++.|+.++...       ...++++++|++|+++++++++.+.+.++++|
T Consensus         3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d   75 (270)
T PRK06179          3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP-------IPGVELLELDVTDDASVQAAVDEVIARAGRID   75 (270)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc-------cCCCeeEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999999999999999888887544311       13578899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||+|.....  ++.+.+.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+++|+++
T Consensus        76 ~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  152 (270)
T PRK06179         76 VLVNNAGVGLAG--AAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQG-SGRIINISSVLGFLPAPYMALYAASKHAV  152 (270)
T ss_pred             EEEECCCCCCCc--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEECCccccCCCCCccHHHHHHHHH
Confidence            999999987654  777889999999999999999999999999999877 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHH---HhhcC--CCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEV---EKLFE--PQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~---~~~~~--~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +.|++.++.|+++.||++++|+||++.|++........  ....   .....  ...+. .+..+|+++++.+++++...
T Consensus       153 ~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~va~~~~~~~~~~  231 (270)
T PRK06179        153 EGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAV-KKADAPEVVADTVVKAALGP  231 (270)
T ss_pred             HHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhcc-ccCCCHHHHHHHHHHHHcCC
Confidence            99999999999999999999999999999865432111  0000   00000  01122 45678999999999998654

>PRK07904 short chain dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-34  Score=235.52  Aligned_cols=213  Identities=20%  Similarity=0.247  Sum_probs=175.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchh-hHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDE-LGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+|++|||||++|||+++|++|+++| ++|+++.|+.++ ..+...+...  ..+++++++|++|.+++.++++++.+ +
T Consensus         7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~-~   85 (253)
T PRK07904          7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA-G   85 (253)
T ss_pred             CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh-c
Confidence            47899999999999999999999995 898888887765 3332222222  23688999999999999999999886 5


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|...+..  -...+.++..+.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++|
T Consensus        86 g~id~li~~ag~~~~~~--~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~-~~~iv~isS~~g~~~~~~~~~Y~~s  162 (253)
T PRK07904         86 GDVDVAIVAFGLLGDAE--ELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQG-FGQIIAMSSVAGERVRRSNFVYGST  162 (253)
T ss_pred             CCCCEEEEeeecCCchh--hcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcC-CceEEEEechhhcCCCCCCcchHHH
Confidence            89999999999865431  11124556678999999999999999999999877 7899999999988888888999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |+++.+|++.++.|++++||++++++||+++|++.....            . .   ....+|+|+|+.++..+.+.
T Consensus       163 Kaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~~------------~-~---~~~~~~~~~A~~i~~~~~~~  223 (253)
T PRK07904        163 KAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHAK------------E-A---PLTVDKEDVAKLAVTAVAKG  223 (253)
T ss_pred             HHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccCC------------C-C---CCCCCHHHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999764321            0 1   12468999999999998654

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=100.00  E-value=9.4e-34  Score=241.11  Aligned_cols=241  Identities=17%  Similarity=0.142  Sum_probs=183.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+|++|||||++|||++++++|+++| ++|++++|+.++..+ +.+.+.  ..++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~   80 (314)
T TIGR01289         2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQ-AAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGR   80 (314)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHH-HHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999 998888887655433 333332  23678899999999999999999998889


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCC----------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCG----------  159 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~----------  159 (264)
                      ++|+||||||+..+. .+..+.+.++|++++++|+.+++.+++.++|+|++++ ..++||++||..+..+          
T Consensus        81 ~iD~lI~nAG~~~~~-~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~  159 (314)
T TIGR01289        81 PLDALVCNAAVYFPT-AKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKA  159 (314)
T ss_pred             CCCEEEECCCccccC-ccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcc
Confidence            999999999975432 1344678999999999999999999999999998753 1479999999976421          


Q ss_pred             -----------------------CCCCchhhchHHHHHHHHHHHHHHhC-cCCceEEEeeCCcc-cCcccccccCCChHH
Q 041914          160 -----------------------GKRRTDYHMSKHAVIGLVRSASVQLG-VHGIRVNCVSPHGL-ATPLTCHAYGMPADE  214 (264)
Q Consensus       160 -----------------------~~~~~~y~~sK~al~~~~~~la~e~~-~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~  214 (264)
                                             ..++..|++||+|+..+++.+++++. +.||++++|+||.+ .|++....... ...
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~-~~~  238 (314)
T TIGR01289       160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPL-FRT  238 (314)
T ss_pred             cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHH-HHH
Confidence                                   13456799999999999999999985 46899999999999 69986532110 000


Q ss_pred             HHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          215 VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      ....+... .. ....+||+.++.+++++.+.....+|..+..++
T Consensus       239 ~~~~~~~~-~~-~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~~~~  281 (314)
T TIGR01289       239 LFPPFQKY-IT-KGYVSEEEAGERLAQVVSDPKLKKSGVYWSWGN  281 (314)
T ss_pred             HHHHHHHH-Hh-ccccchhhhhhhhHHhhcCcccCCCceeeecCC
Confidence            00000000 01 235689999999999887554445787776543

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=100.00  E-value=1.9e-33  Score=230.11  Aligned_cols=235  Identities=22%  Similarity=0.339  Sum_probs=193.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|+++||||+++||.++++.|+++|++|+++.|+.++..+...+....++++++++|+++.+++.++++++.+.+++
T Consensus         2 ~~~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   81 (238)
T PRK05786          2 RLKGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNA   81 (238)
T ss_pred             CcCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            47899999999999999999999999999998888876654332222222246788999999999999999999888899


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK  170 (264)
                      +|.+|+++|.....  ++.  +.++++.++++|+.+++.+.+.++|.|++   .+++|++||..+. .+.++...|+++|
T Consensus        82 id~ii~~ag~~~~~--~~~--~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~iv~~ss~~~~~~~~~~~~~Y~~sK  154 (238)
T PRK05786         82 IDGLVVTVGGYVED--TVE--EFSGLEEMLTNHIKIPLYAVNASLRFLKE---GSSIVLVSSMSGIYKASPDQLSYAVAK  154 (238)
T ss_pred             CCEEEEcCCCcCCC--chH--HHHHHHHHHHHhchHHHHHHHHHHHHHhc---CCEEEEEecchhcccCCCCchHHHHHH
Confidence            99999999875432  333  33889999999999999999999999865   4689999998774 3567778899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.+++.++.++...||++++|+||++.|++...      .... ..   .+......+++|+++.+.+++++...++
T Consensus       155 ~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~------~~~~-~~---~~~~~~~~~~~~va~~~~~~~~~~~~~~  224 (238)
T PRK05786        155 AGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPE------RNWK-KL---RKLGDDMAPPEDFAKVIIWLLTDEADWV  224 (238)
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCch------hhhh-hh---ccccCCCCCHHHHHHHHHHHhcccccCc
Confidence            999999999999999999999999999999986421      1111 11   1111346799999999999999888899


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.+.+|||..|
T Consensus       225 ~g~~~~~~~~~~~  237 (238)
T PRK05786        225 DGVVIPVDGGARL  237 (238)
T ss_pred             cCCEEEECCcccc
Confidence            9999999999876

>PRK08267 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.6e-33  Score=232.41  Aligned_cols=219  Identities=31%  Similarity=0.373  Sum_probs=183.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh-cCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN-YGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~-~~~id~   94 (264)
                      |++|||||++|||++++++|+++|++|+++.|+.+.. +.+.+.....++.++++|++|.+++.++++++.+. ++++|+
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~   80 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGL-AALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV   80 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence            7899999999999999999999999988888776544 33333333447889999999999999999998876 789999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      ||||||.....  ++.+.+.+++++++++|+.+++.+++.+.++|++++ .++||++||..+..+.+....|+.||++++
T Consensus        81 vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~  157 (260)
T PRK08267         81 LFNNAGILRGG--PFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATP-GARVINTSSASAIYGQPGLAVYSATKFAVR  157 (260)
T ss_pred             EEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEeCchhhCcCCCCchhhHHHHHHHH
Confidence            99999987654  778889999999999999999999999999998876 689999999999999999999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +|+++++.+++++||++++|.||+++|++.....   .+....... .  . ....+|+|+++.+++++..
T Consensus       158 ~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~~~~~~~~-~--~-~~~~~~~~va~~~~~~~~~  221 (260)
T PRK08267        158 GLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTS---NEVDAGSTK-R--L-GVRLTPEDVAEAVWAAVQH  221 (260)
T ss_pred             HHHHHHHHHhcccCcEEEEEecCCcCCccccccc---chhhhhhHh-h--c-cCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999999875311   001111111 1  1 2346899999999999853

>PRK07578 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.4e-33  Score=224.91  Aligned_cols=197  Identities=21%  Similarity=0.255  Sum_probs=169.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++||||++|||++++++|+++ ++|+++.|+..                .+++|++|.+++++++++    ++++|++|
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------------~~~~D~~~~~~~~~~~~~----~~~id~lv   60 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------------DVQVDITDPASIRALFEK----VGKVDAVV   60 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------------ceEecCCChHHHHHHHHh----cCCCCEEE
Confidence            6899999999999999999999 99888877532                378999999999998875    47899999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      ||+|.....  ++.+.+.++|++.+++|+.+++++++.++|+|.+   .++|+++||..+..+.+++..|+++|+++++|
T Consensus        61 ~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~  135 (199)
T PRK07578         61 SAAGKVHFA--PLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLND---GGSFTLTSGILSDEPIPGGASAATVNGALEGF  135 (199)
T ss_pred             ECCCCCCCC--chhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCeEEEEcccccCCCCCCchHHHHHHHHHHHH
Confidence            999976543  7888899999999999999999999999999975   47999999999999999999999999999999


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEE
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV  256 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~  256 (264)
                      ++.++.|+ ++||++|+|+||+++|++....         ..    .+. .+..+|+|+|+.+..+++   ...+|+.|.
T Consensus       136 ~~~la~e~-~~gi~v~~i~Pg~v~t~~~~~~---------~~----~~~-~~~~~~~~~a~~~~~~~~---~~~~g~~~~  197 (199)
T PRK07578        136 VKAAALEL-PRGIRINVVSPTVLTESLEKYG---------PF----FPG-FEPVPAARVALAYVRSVE---GAQTGEVYK  197 (199)
T ss_pred             HHHHHHHc-cCCeEEEEEcCCcccCchhhhh---------hc----CCC-CCCCCHHHHHHHHHHHhc---cceeeEEec
Confidence            99999999 8899999999999999864210         11    122 345799999999999985   358999887


Q ss_pred             e
Q 041914          257 V  257 (264)
Q Consensus       257 ~  257 (264)
                      +
T Consensus       198 ~  198 (199)
T PRK07578        198 V  198 (199)
T ss_pred             c
Confidence            5

>PRK08251 short chain dehydrogenase; Provisional

Probab=100.00  E-value=6.7e-33  Score=228.34  Aligned_cols=214  Identities=23%  Similarity=0.250  Sum_probs=182.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+++||||++|||++++++|+++|++|+++.|+.++..+...+..   ...++.++++|+++.+++.++++++.+++++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            6899999999999999999999999998888887665443322221   1347889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC-CchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK  170 (264)
                      +|++|||+|+....  ++.+.+.+.+++.+++|+.+++.+++.++|.|++.+ .++||++||..+..+.+. ...|+.||
T Consensus        82 id~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~Y~~sK  158 (248)
T PRK08251         82 LDRVIVNAGIGKGA--RLGTGKFWANKATAETNFVAALAQCEAAMEIFREQG-SGHLVLISSVSAVRGLPGVKAAYAASK  158 (248)
T ss_pred             CCEEEECCCcCCCC--CcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEEeccccccCCCCCcccHHHHH
Confidence            99999999987654  677788999999999999999999999999998876 689999999998877774 68899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++++.+++.++.++.+.||++++++||+++|++......                ....++++|+++.++..+..+.
T Consensus       159 ~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~----------------~~~~~~~~~~a~~i~~~~~~~~  219 (248)
T PRK08251        159 AGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAKS----------------TPFMVDTETGVKALVKAIEKEP  219 (248)
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcccc----------------CCccCCHHHHHHHHHHHHhcCC
Confidence            999999999999999889999999999999997643210                0245689999999998886543

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=100.00  E-value=1.2e-33  Score=215.21  Aligned_cols=187  Identities=23%  Similarity=0.276  Sum_probs=168.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.|.++|||||++|||++++++|.+.|-+|++..|+.+.+.+..++.   -.++...||+.|.++..++++.+++.|+.
T Consensus         2 k~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~---p~~~t~v~Dv~d~~~~~~lvewLkk~~P~   78 (245)
T COG3967           2 KTTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAEN---PEIHTEVCDVADRDSRRELVEWLKKEYPN   78 (245)
T ss_pred             cccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcC---cchheeeecccchhhHHHHHHHHHhhCCc
Confidence            578999999999999999999999999999888888877765544333   25778999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +++||||||+....+-.-.+...++.++-+.+|+.+++++++.++|++.++. .+.||++||..++.|......||++|+
T Consensus        79 lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafvPm~~~PvYcaTKA  157 (245)
T COG3967          79 LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFVPMASTPVYCATKA  157 (245)
T ss_pred             hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccCcccccccchhhHH
Confidence            9999999999877643323456677889999999999999999999999987 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCc
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                      |+..|+.+|+..++..+|.|.-+.|..|+|+
T Consensus       158 aiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~  188 (245)
T COG3967         158 AIHSYTLALREQLKDTSVEVIELAPPLVDTT  188 (245)
T ss_pred             HHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence            9999999999999999999999999999996

>PRK06482 short chain dehydrogenase; Provisional

Probab=100.00  E-value=2.5e-32  Score=228.48  Aligned_cols=236  Identities=21%  Similarity=0.300  Sum_probs=188.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .|++|||||+++||++++++|+++|++|+++.|+.+.. +.+.+... .++.++++|++|.+++.++++++.+.++++|+
T Consensus         2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   79 (276)
T PRK06482          2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDAL-DDLKARYG-DRLWVLQLDVTDSAAVRAVVDRAFAALGRIDV   79 (276)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHhcc-CceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            37899999999999999999999999988888875543 22322222 36788999999999999999999998899999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      ||||+|.....  +..+.+.+++++.+++|+.+++++++.++|+|++++ .++||++||..+..+.++...|++||++++
T Consensus        80 vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~  156 (276)
T PRK06482         80 VVSNAGYGLFG--AAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQG-GGRIVQVSSEGGQIAYPGFSLYHATKWGIE  156 (276)
T ss_pred             EEECCCCCCCc--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcCcccccCCCCCchhHHHHHHHH
Confidence            99999987654  677888999999999999999999999999998766 689999999998888889999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---------ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---------PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      .|++.++.++++.||+++.++||.+.|++.......         ........+.. .+. .-..+++|++++++..+..
T Consensus       157 ~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~d~~~~~~a~~~~~~~  234 (276)
T PRK06482        157 GFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALAD-GSF-AIPGDPQKMVQAMIASADQ  234 (276)
T ss_pred             HHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhh-ccC-CCCCCHHHHHHHHHHHHcC
Confidence            999999999999999999999999998874322110         01112222211 111 2246899999999998853


Q ss_pred             CCCCeeccEEEecCe
Q 041914          246 DSEFVTGHDLVVDGG  260 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG  260 (264)
                      .   ..+..+++.+|
T Consensus       235 ~---~~~~~~~~g~~  246 (276)
T PRK06482        235 T---PAPRRLTLGSD  246 (276)
T ss_pred             C---CCCeEEecChH
Confidence            3   22445666654

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=100.00  E-value=5.8e-33  Score=214.79  Aligned_cols=224  Identities=23%  Similarity=0.262  Sum_probs=186.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhh-HHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHh--cC
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQDEL-GRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQN--YG   90 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~--~~   90 (264)
                      |.++||||.+|||..++++|.+. |..+++..+++.+. .++++... ...++|.+++|+++.++++++++++.+-  .+
T Consensus         4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~   83 (249)
T KOG1611|consen    4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD   83 (249)
T ss_pred             ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence            66999999999999999999975 77777766664433 34433322 2358999999999999999999999986  56


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC----------CcEEEEecCCCCCCC-
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV----------RGSIVCTASVAGSCG-  159 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~----------~~~iv~iss~~~~~~-  159 (264)
                      ++|+||+|||+...- ....+.+.+.|.+.+++|+.+++.++|+++|++++...          +..|||+||.++..+ 
T Consensus        84 GlnlLinNaGi~~~y-~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~  162 (249)
T KOG1611|consen   84 GLNLLINNAGIALSY-NTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGG  162 (249)
T ss_pred             CceEEEeccceeeec-ccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCC
Confidence            899999999998654 36667788999999999999999999999999987531          347999999888743 


Q ss_pred             --CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHH
Q 041914          160 --GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD  237 (264)
Q Consensus       160 --~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  237 (264)
                        ..++.+|..||+|+++|+|+++.|+++.+|-|..+|||+|.|+|-..                    .-.++|||-+.
T Consensus       163 ~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~--------------------~a~ltveeSts  222 (249)
T KOG1611|consen  163 FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK--------------------KAALTVEESTS  222 (249)
T ss_pred             CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC--------------------CcccchhhhHH
Confidence              35678999999999999999999999999999999999999998631                    34468888888


Q ss_pred             HHHHHhCCCCCCeeccEEEecCe
Q 041914          238 AVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       238 ~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      .++.-...-....+|..|+-|+-
T Consensus       223 ~l~~~i~kL~~~hnG~ffn~dlt  245 (249)
T KOG1611|consen  223 KLLASINKLKNEHNGGFFNRDGT  245 (249)
T ss_pred             HHHHHHHhcCcccCcceEccCCC
Confidence            88887777778889999988863

>PRK05693 short chain dehydrogenase; Provisional

Probab=100.00  E-value=9.1e-33  Score=230.92  Aligned_cols=222  Identities=23%  Similarity=0.293  Sum_probs=179.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||++|||++++++|+++|++|++++|+.++... +..    ..+.++.+|+++.++++++++++.+.++++|++
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~-~~~----~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~v   76 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEA-LAA----AGFTAVQLDVNDGAALARLAEELEAEHGGLDVL   76 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHH----CCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            689999999999999999999999998888887654322 221    146788999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||+|.....  ++.+.+.++|++.+++|+.+++.+++.++|.|++.  .++||++||..+..+.+....|+++|++++.
T Consensus        77 i~~ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~  152 (274)
T PRK05693         77 INNAGYGAMG--PLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRS--RGLVVNIGSVSGVLVTPFAGAYCASKAAVHA  152 (274)
T ss_pred             EECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCEEEEECCccccCCCCCccHHHHHHHHHHH
Confidence            9999986544  77888999999999999999999999999999764  4799999999999888999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh---------HHHHhhcCCC-CCCCCCCCChHHHHHHHHHHhCC
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA---------DEVEKLFEPQ-TPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---------~~~~~~~~~~-~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++++.|+++.||+|++++||+++|++.........         ....+.+... ........+|+++++.++..+..
T Consensus       153 ~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~~~  232 (274)
T PRK05693        153 LSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDNPTPAAEFARQLLAAVQQ  232 (274)
T ss_pred             HHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHHhC
Confidence            9999999999999999999999999998654321100         0000000000 00002345899999999998764


Q ss_pred             C
Q 041914          246 D  246 (264)
Q Consensus       246 ~  246 (264)
                      .
T Consensus       233 ~  233 (274)
T PRK05693        233 S  233 (274)
T ss_pred             C
Confidence            3

>PRK06181 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-32  Score=227.76  Aligned_cols=223  Identities=31%  Similarity=0.477  Sum_probs=184.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++++|||||+++||+++++.|+++|++|+++.|+..+..+...+... ..++.++.+|++|.+++.++++++.++++++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999988888876554333222221 23688899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCC-CHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           94 IMFSNAGILSSSDQTVLDL-DFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~-~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      ++|||+|.....  ++.+. +.+.+++.+++|+.+++.+++.++|.|.++  .+++|++||..+..+.+++..|+++|++
T Consensus        81 ~vi~~ag~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~~~iv~~sS~~~~~~~~~~~~Y~~sK~~  156 (263)
T PRK06181         81 ILVNNAGITMWS--RFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKAS--RGQIVVVSSLAGLTGVPTRSGYAASKHA  156 (263)
T ss_pred             EEEECCCccccc--chhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCEEEEEecccccCCCCCccHHHHHHHH
Confidence            999999987654  66777 899999999999999999999999999764  4799999999999899999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC-CCCCCChHHHHHHHHHHhCCC
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL-EGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++.+++.++.++.+++|+++++.||++.|++...........    . ...+. ..++++|+|+++.+++++...
T Consensus       157 ~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~dva~~i~~~~~~~  226 (263)
T PRK06181        157 LHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKP----L-GKSPMQESKIMSAEECAEAILPAIARR  226 (263)
T ss_pred             HHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccc----c-ccccccccCCCCHHHHHHHHHHHhhCC
Confidence            999999999999999999999999999999875432111100    0 01111 146789999999999999753

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=100.00  E-value=2.5e-32  Score=233.37  Aligned_cols=242  Identities=17%  Similarity=0.122  Sum_probs=182.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++.+|+++||||++|||.+++++|+++|++|++++|+.++..+...+.. ...++.++++|++|.++++++++++.+.+
T Consensus         2 ~~~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   81 (322)
T PRK07453          2 SQDAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALG   81 (322)
T ss_pred             CCCCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence            45678999999999999999999999999998888887665443333321 12468889999999999999999988877


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-CcEEEEecCCCCCC----------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-RGSIVCTASVAGSC----------  158 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-~~~iv~iss~~~~~----------  158 (264)
                      +++|+||||||+.... .+..+.+.++|+..+++|+.+++.+++.++|.|++++. .++||++||.....          
T Consensus        82 ~~iD~li~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~  160 (322)
T PRK07453         82 KPLDALVCNAAVYMPL-LKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIP  160 (322)
T ss_pred             CCccEEEECCcccCCC-CCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCC
Confidence            8999999999986432 13346788999999999999999999999999987652 26999999965421          


Q ss_pred             -------------------------CCCCCchhhchHHHHHHHHHHHHHHhC-cCCceEEEeeCCcc-cCcccccccCCC
Q 041914          159 -------------------------GGKRRTDYHMSKHAVIGLVRSASVQLG-VHGIRVNCVSPHGL-ATPLTCHAYGMP  211 (264)
Q Consensus       159 -------------------------~~~~~~~y~~sK~al~~~~~~la~e~~-~~~i~v~~v~pG~v-~t~~~~~~~~~~  211 (264)
                                               +..+...|+.||.+...+++.+++++. ..||++++++||.+ .|++.+..... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~-  239 (322)
T PRK07453        161 APADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRNTPPL-  239 (322)
T ss_pred             CccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCcccccCCHH-
Confidence                                     112456899999999999999999995 46899999999999 58876432110 


Q ss_pred             hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEE
Q 041914          212 ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV  256 (264)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~  256 (264)
                      .......+.. ... ....++++.+..+++++.+.....+|..|.
T Consensus       240 ~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~G~y~~  282 (322)
T PRK07453        240 FQKLFPWFQK-NIT-GGYVSQELAGERVAQVVADPEFAQSGVHWS  282 (322)
T ss_pred             HHHHHHHHHH-HHh-hceecHHHHhhHHHHhhcCcccCCCCceee
Confidence            0111111111 111 234577888888888876554456888776

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=3.2e-33  Score=234.30  Aligned_cols=234  Identities=22%  Similarity=0.253  Sum_probs=187.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ...++.+++++|||+++|||+++|+.|+++|++|++.+|+.+...+...+...   ...+++++||+++.+++.+++++.
T Consensus        29 ~~~~~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~  108 (314)
T KOG1208|consen   29 HGIDLSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEF  108 (314)
T ss_pred             ccccCCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHH
Confidence            35678899999999999999999999999999999999988665554444443   357899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------  159 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------  159 (264)
                      ++.++++|+||||||+..+..    ..+.|.+|..|.+|+.|+|.+++.++|.|+.+. .+|||++||..+...      
T Consensus       109 ~~~~~~ldvLInNAGV~~~~~----~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~-~~RIV~vsS~~~~~~~~~~~l  183 (314)
T KOG1208|consen  109 KKKEGPLDVLINNAGVMAPPF----SLTKDGLELTFATNYLGHFLLTELLLPLLKRSA-PSRIVNVSSILGGGKIDLKDL  183 (314)
T ss_pred             HhcCCCccEEEeCcccccCCc----ccCccchhheehhhhHHHHHHHHHHHHHHhhCC-CCCEEEEcCccccCccchhhc
Confidence            999999999999999988752    567789999999999999999999999999876 589999999886110      


Q ss_pred             -------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCCh
Q 041914          160 -------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRA  232 (264)
Q Consensus       160 -------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (264)
                             ......|+.||.++..+++.+++.+.. ||.+++++||.+.|+...+. ..........+.    . ....++
T Consensus       184 ~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~-~V~~~~~hPG~v~t~~l~r~-~~~~~~l~~~l~----~-~~~ks~  256 (314)
T KOG1208|consen  184 SGEKAKLYSSDAAYALSKLANVLLANELAKRLKK-GVTTYSVHPGVVKTTGLSRV-NLLLRLLAKKLS----W-PLTKSP  256 (314)
T ss_pred             cchhccCccchhHHHHhHHHHHHHHHHHHHHhhc-CceEEEECCCcccccceecc-hHHHHHHHHHHH----H-HhccCH
Confidence                   222335999999999999999999988 99999999999999943331 111111111111    1 223488


Q ss_pred             HHHHHHHHHHh-CCCCCCeeccE
Q 041914          233 GHVADAVLFLA-CRDSEFVTGHD  254 (264)
Q Consensus       233 edva~~~~~l~-s~~~~~~~G~~  254 (264)
                      +.-|+..++.+ +++-...+|..
T Consensus       257 ~~ga~t~~~~a~~p~~~~~sg~y  279 (314)
T KOG1208|consen  257 EQGAATTCYAALSPELEGVSGKY  279 (314)
T ss_pred             HHHhhheehhccCccccCccccc
Confidence            89999999987 45556777765

>PRK07023 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.2e-32  Score=226.33  Aligned_cols=222  Identities=17%  Similarity=0.211  Sum_probs=178.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHH-HHHhc---CC
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDS-TVQNY---GQ   91 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~-~~~~~---~~   91 (264)
                      +++|||||++|||++++++|+++|++|+++.|+..+..   .. ....++.++++|+++.+++++++++ +.+.+   ++
T Consensus         2 ~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~---~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~   77 (243)
T PRK07023          2 VRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL---AA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGAS   77 (243)
T ss_pred             ceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh---hh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCC
Confidence            36899999999999999999999999888888755321   11 1224688899999999999998877 55544   47


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|..... .++.+.+.++|++.+++|+.+++.+++.+++.|.+++ .++||++||..+..+.+++..|+++|+
T Consensus        78 ~~~~v~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  155 (243)
T PRK07023         78 RVLLINNAGTVEPI-GPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAA-ERRILHISSGAARNAYAGWSVYCATKA  155 (243)
T ss_pred             ceEEEEcCcccCCC-CccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccC-CCEEEEEeChhhcCCCCCchHHHHHHH
Confidence            99999999986542 3677789999999999999999999999999998866 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC---hHHHHhhcCCCCCCCCCCCChHHHHH-HHHHHhCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP---ADEVEKLFEPQTPLEGVVLRAGHVAD-AVLFLACRD  246 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~edva~-~~~~l~s~~  246 (264)
                      +++++++.++.+ .+.||++++|+||+++|++........   .+. ...+....|. ++..+|+|+|. .+.+|+++.
T Consensus       156 a~~~~~~~~~~~-~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~va~~~~~~l~~~~  231 (243)
T PRK07023        156 ALDHHARAVALD-ANRALRIVSLAPGVVDTGMQATIRATDEERFPM-RERFRELKAS-GALSTPEDAARRLIAYLLSDD  231 (243)
T ss_pred             HHHHHHHHHHhc-CCCCcEEEEecCCccccHHHHHHHhcccccchH-HHHHHHhhhc-CCCCCHHHHHHHHHHHHhccc
Confidence            999999999999 778999999999999999864321111   111 1112223344 77889999999 566777654

>PRK07326 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.3e-32  Score=220.30  Aligned_cols=228  Identities=28%  Similarity=0.384  Sum_probs=187.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.+++++||||+|+||.+++++|+++|++|+++.|+.....+...+......++++.+|+++.+++..+++++.+.+++
T Consensus         3 ~~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (237)
T PRK07326          3 SLKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGG   82 (237)
T ss_pred             CCCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36689999999999999999999999999988888876544333222222246889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++||++|.....  ++.+.+.+++++.+++|+.+++.+++++++.|++ + .+++|++||..+..+.++...|+.+|+
T Consensus        83 ~d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~-~~~iv~~ss~~~~~~~~~~~~y~~sk~  158 (237)
T PRK07326         83 LDVLIANAGVGHFA--PVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKR-G-GGYIINISSLAGTNFFAGGAAYNASKF  158 (237)
T ss_pred             CCEEEECCCCCCCC--chhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHH-C-CeEEEEECChhhccCCCCCchHHHHHH
Confidence            99999999986543  6778899999999999999999999999999943 3 579999999998888888899999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      ++.++++.++.+++..|+++++|.||++.|++.....   .+.          . ....+++|+++.+++++......+.
T Consensus       159 a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~---~~~----------~-~~~~~~~d~a~~~~~~l~~~~~~~~  224 (237)
T PRK07326        159 GLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP---SEK----------D-AWKIQPEDIAQLVLDLLKMPPRTLP  224 (237)
T ss_pred             HHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc---chh----------h-hccCCHHHHHHHHHHHHhCCccccc
Confidence            9999999999999999999999999999998653221   000          0 1236899999999999976654444


Q ss_pred             ccEEEec
Q 041914          252 GHDLVVD  258 (264)
Q Consensus       252 G~~i~~d  258 (264)
                      + .+.+.
T Consensus       225 ~-~~~~~  230 (237)
T PRK07326        225 S-KIEVR  230 (237)
T ss_pred             c-ceEEe
Confidence            4 34443

>PRK07102 short chain dehydrogenase; Provisional

Probab=100.00  E-value=8.6e-32  Score=221.14  Aligned_cols=210  Identities=25%  Similarity=0.283  Sum_probs=179.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |+++||||++|||++++++|+++|++|+++.|+.++......+..  ...++.++++|++|+++++++++++.+   ++|
T Consensus         2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~---~~d   78 (243)
T PRK07102          2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPA---LPD   78 (243)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhh---cCC
Confidence            689999999999999999999999999888887765433332221  124788999999999999999998764   469


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++|||+|.....  ++.+.+.+++.+.+++|+.+++++++.++|+|.+++ .+++|++||..+..+.++...|+++|+++
T Consensus        79 ~vv~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~  155 (243)
T PRK07102         79 IVLIAVGTLGDQ--AACEADPALALREFRTNFEGPIALLTLLANRFEARG-SGTIVGISSVAGDRGRASNYVYGSAKAAL  155 (243)
T ss_pred             EEEECCcCCCCc--ccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCC-CCEEEEEecccccCCCCCCcccHHHHHHH
Confidence            999999987654  677889999999999999999999999999998876 78999999999988888999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|++.++.|+++.||++++|+||+++|++....              ..|. ....+|+|+++.++.++++.
T Consensus       156 ~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~--------------~~~~-~~~~~~~~~a~~i~~~~~~~  213 (243)
T PRK07102        156 TAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL--------------KLPG-PLTAQPEEVAKDIFRAIEKG  213 (243)
T ss_pred             HHHHHHHHHHhhccCcEEEEEecCcccChhhhcc--------------CCCc-cccCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999865321              0111 34578999999999998754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=100.00  E-value=4.1e-33  Score=228.77  Aligned_cols=204  Identities=27%  Similarity=0.406  Sum_probs=167.3

Q ss_pred             HHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCcc
Q 041914           31 TARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL  110 (264)
Q Consensus        31 ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~  110 (264)
                      +|++|+++|++|+++.|+.++..          ...++++|++|.++++++++++.   +++|+||||||....      
T Consensus         1 ~a~~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~---~~iD~li~nAG~~~~------   61 (241)
T PRK12428          1 TARLLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALP---GRIDALFNIAGVPGT------   61 (241)
T ss_pred             ChHHHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhc---CCCeEEEECCCCCCC------
Confidence            47899999999988888765431          12468999999999999998774   689999999997522      


Q ss_pred             CCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC---------------------------CCCCCC
Q 041914          111 DLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS---------------------------CGGKRR  163 (264)
Q Consensus       111 ~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~---------------------------~~~~~~  163 (264)
                          +.|++.+++|+.+++.+++.++|+|.+   .|+||++||..+.                           .+.++.
T Consensus        62 ----~~~~~~~~vN~~~~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (241)
T PRK12428         62 ----APVELVARVNFLGLRHLTEALLPRMAP---GGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA  134 (241)
T ss_pred             ----CCHHHhhhhchHHHHHHHHHHHHhccC---CcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcc
Confidence                248899999999999999999999964   4799999999876                           356778


Q ss_pred             chhhchHHHHHHHHHHHH-HHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSAS-VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la-~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ..|++||+++++|++.++ .|++++||+||+|+||++.|+|.........+....  ....|. +++.+|||+|+.++||
T Consensus       135 ~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~--~~~~~~-~~~~~pe~va~~~~~l  211 (241)
T PRK12428        135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVD--SDAKRM-GRPATADEQAAVLVFL  211 (241)
T ss_pred             cHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhh--hccccc-CCCCCHHHHHHHHHHH
Confidence            899999999999999999 999999999999999999999875432111111111  122355 7788999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++...+++|+.+.+|||+..
T Consensus       212 ~s~~~~~~~G~~i~vdgg~~~  232 (241)
T PRK12428        212 CSDAARWINGVNLPVDGGLAA  232 (241)
T ss_pred             cChhhcCccCcEEEecCchHH
Confidence            998889999999999999753

>PRK07201 short chain dehydrogenase; Provisional

Probab=100.00  E-value=3.9e-32  Score=252.84  Aligned_cols=219  Identities=26%  Similarity=0.329  Sum_probs=184.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++|.++++++++++.+.+
T Consensus       367 ~~~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~  446 (657)
T PRK07201        367 GPLVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEH  446 (657)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc
Confidence            357899999999999999999999999999998888876655433333222 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCC--CHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDL--DFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~--~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++|++|||||.....  .+.+.  +.+++++++++|+.+++.+++.++|.|++++ .++||++||..+..+.+....|+
T Consensus       447 g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  523 (657)
T PRK07201        447 GHVDYLVNNAGRSIRR--SVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERR-FGHVVNVSSIGVQTNAPRFSAYV  523 (657)
T ss_pred             CCCCEEEECCCCCCCC--ChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEECChhhcCCCCCcchHH
Confidence            9999999999986443  33222  3688999999999999999999999998877 78999999999998889999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|+++++|+++++.|+++.||+||+|+||+++|+|......         + ..    ....+||++|+.++..+.+.
T Consensus       524 ~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~---------~-~~----~~~~~~~~~a~~i~~~~~~~  588 (657)
T PRK07201        524 ASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR---------Y-NN----VPTISPEEAADMVVRAIVEK  588 (657)
T ss_pred             HHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc---------c-cC----CCCCCHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999998642210         0 01    23568999999999977543

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=100.00  E-value=7.2e-32  Score=219.09  Aligned_cols=191  Identities=23%  Similarity=0.257  Sum_probs=170.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-   89 (264)
                      .++.+|.|+|||.-+|.|+.+|++|.++|..|++-+-. ++..+.++.+....+...+++|++++++++++.+.+++.. 
T Consensus        25 ~~~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~-~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~  103 (322)
T KOG1610|consen   25 DSLSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLT-EEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLG  103 (322)
T ss_pred             cccCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeec-CchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcc
Confidence            34678999999999999999999999999998888843 3344555555545678889999999999999999998865 


Q ss_pred             -CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           90 -GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        90 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                       +.+-.||||||+.... .+.+-++.+++++++++|++|++.+++.++|++++.  +||||++||+.|..+.|...+|++
T Consensus       104 ~~gLwglVNNAGi~~~~-g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~a--rGRvVnvsS~~GR~~~p~~g~Y~~  180 (322)
T KOG1610|consen  104 EDGLWGLVNNAGISGFL-GPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRA--RGRVVNVSSVLGRVALPALGPYCV  180 (322)
T ss_pred             cccceeEEecccccccc-CccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhc--cCeEEEecccccCccCcccccchh
Confidence             3599999999987654 366778999999999999999999999999999886  599999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccc
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTC  205 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  205 (264)
                      ||+|++.|+.++++|+.+.||.|..|.||.+.|++..
T Consensus       181 SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~l~~  217 (322)
T KOG1610|consen  181 SKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTNLAN  217 (322)
T ss_pred             hHHHHHHHHHHHHHHHHhcCcEEEEeccCccccccCC
Confidence            9999999999999999999999999999999999875

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=6.8e-33  Score=212.12  Aligned_cols=186  Identities=25%  Similarity=0.334  Sum_probs=167.9

Q ss_pred             CCcEEEEeCC-CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH-hcCC
Q 041914           14 EGKVAIITGG-ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ-NYGQ   91 (264)
Q Consensus        14 ~~k~vlItGa-s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~~   91 (264)
                      +.|.+||||+ +||||.+++++|+++|+.|+..+|+.++......+.    .+...++|+++++++..+..++.. .+|+
T Consensus         6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~----gl~~~kLDV~~~~~V~~v~~evr~~~~Gk   81 (289)
T KOG1209|consen    6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQF----GLKPYKLDVSKPEEVVTVSGEVRANPDGK   81 (289)
T ss_pred             CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhh----CCeeEEeccCChHHHHHHHHHHhhCCCCc
Confidence            3588999986 689999999999999999999999988775543332    578999999999999999999998 7799


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+|+||||.....  |..|.+.++.++.|++|++|.+..+|++...+.+.  +|.||+++|..+..|.|..+.|++||+
T Consensus        82 ld~L~NNAG~~C~~--Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~lika--KGtIVnvgSl~~~vpfpf~~iYsAsKA  157 (289)
T KOG1209|consen   82 LDLLYNNAGQSCTF--PALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKA--KGTIVNVGSLAGVVPFPFGSIYSASKA  157 (289)
T ss_pred             eEEEEcCCCCCccc--ccccCCHHHHHhhhccceeeeehHHHHHHHHHHHc--cceEEEecceeEEeccchhhhhhHHHH
Confidence            99999999987665  88899999999999999999999999999655554  699999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA  207 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~  207 (264)
                      |+..+++.|..|+++.||+|..+.||.+.|++....
T Consensus       158 Aihay~~tLrlEl~PFgv~Vin~itGGv~T~Ia~k~  193 (289)
T KOG1209|consen  158 AIHAYARTLRLELKPFGVRVINAITGGVATDIADKR  193 (289)
T ss_pred             HHHHhhhhcEEeeeccccEEEEecccceecccccCC
Confidence            999999999999999999999999999999987663

>PRK06101 short chain dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-31  Score=218.91  Aligned_cols=205  Identities=25%  Similarity=0.288  Sum_probs=170.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++++||||++|||++++++|+++|++|+++.|+.+.. +.+.+.  ..++.++++|++|.++++++++++..   .+|.+
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~-~~~~~~--~~~~~~~~~D~~~~~~~~~~~~~~~~---~~d~~   75 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVL-DELHTQ--SANIFTLAFDVTDHPGTKAALSQLPF---IPELW   75 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHh--cCCCeEEEeeCCCHHHHHHHHHhccc---CCCEE
Confidence            7899999999999999999999999988888875543 323222  13578899999999999999887642   57999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||+|.....  +..+.+.++|++++++|+.+++++++.++|.|.+   .+++|++||..+..+.++...|+++|+++++
T Consensus        76 i~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~  150 (240)
T PRK06101         76 IFNAGDCEYM--DDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC---GHRVVIVGSIASELALPRAEAYGASKAAVAY  150 (240)
T ss_pred             EEcCcccccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc---CCeEEEEechhhccCCCCCchhhHHHHHHHH
Confidence            9999865332  4446789999999999999999999999999965   3589999999999999999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |++.++.|++++||+++++.||.+.|++.....            ...   ....+|+|+++.++..+..+
T Consensus       151 ~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~~------------~~~---~~~~~~~~~a~~i~~~i~~~  206 (240)
T PRK06101        151 FARTLQLDLRPKGIEVVTVFPGFVATPLTDKNT------------FAM---PMIITVEQASQEIRAQLARG  206 (240)
T ss_pred             HHHHHHHHHHhcCceEEEEeCCcCCCCCcCCCC------------CCC---CcccCHHHHHHHHHHHHhcC
Confidence            999999999999999999999999999764210            001   22468999999999877544

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=100.00  E-value=1.1e-32  Score=223.79  Aligned_cols=191  Identities=23%  Similarity=0.255  Sum_probs=169.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHH-HHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQ-VKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~-~~~~~~~~~~~~~   90 (264)
                      .|+|++||||+.|||++.+++||++|.+|++++|+.+++.+..+++.+.  .+++++.+|+++.+. .+++.+.+.+  .
T Consensus        48 ~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~--~  125 (312)
T KOG1014|consen   48 LGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAG--L  125 (312)
T ss_pred             cCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcC--C
Confidence            3599999999999999999999999999999999999887666665543  468999999998876 3333333322  2


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++-+||||+|...+.+..+.+.+.+.+++.+++|..+...+++.++|.|.+++ +|.||+++|..+..|.|.++.|+++|
T Consensus       126 ~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~-~G~IvnigS~ag~~p~p~~s~ysasK  204 (312)
T KOG1014|consen  126 DVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERK-KGIIVNIGSFAGLIPTPLLSVYSASK  204 (312)
T ss_pred             ceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCC-CceEEEeccccccccChhHHHHHHHH
Confidence            68899999999986667899999999999999999999999999999999988 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA  207 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~  207 (264)
                      +.++.|+++|..||+++||.|.++.|..|.|+|....
T Consensus       205 ~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~~~~  241 (312)
T KOG1014|consen  205 AFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMAKYR  241 (312)
T ss_pred             HHHHHHHHHHHHHHHhcCeEEEEeehhheeccccccC
Confidence            9999999999999999999999999999999997543

>PRK08264 short chain dehydrogenase; Validated

Probab=100.00  E-value=1.8e-30  Score=212.61  Aligned_cols=206  Identities=24%  Similarity=0.278  Sum_probs=174.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++.+++++||||+++||++++++|+++|+ +|+++.|+.++..+      ...++.++.+|++|.+++.++++.    +
T Consensus         2 ~~~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~------~~~~~~~~~~D~~~~~~~~~~~~~----~   71 (238)
T PRK08264          2 MDIKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD------LGPRVVPLQLDVTDPASVAAAAEA----A   71 (238)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh------cCCceEEEEecCCCHHHHHHHHHh----c
Confidence            457889999999999999999999999999 88888887654322      224688999999999998887764    3


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++||++|..... .++.+.+.+++++.+++|+.+++.+++.++|.+++.+ .+++|++||..+..+.++...|+.+
T Consensus        72 ~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~v~~sS~~~~~~~~~~~~y~~s  149 (238)
T PRK08264         72 SDVTILVNNAGIFRTG-SLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANG-GGAIVNVLSVLSWVNFPNLGTYSAS  149 (238)
T ss_pred             CCCCEEEECCCcCCCC-CccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcChhhccCCCCchHhHHH
Confidence            6799999999984332 3677889999999999999999999999999998776 7899999999999988999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |++++.+++.++.++.++|++++.+.||.++|++.....                  ....+++++++.++..+...
T Consensus       150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~~------------------~~~~~~~~~a~~~~~~~~~~  208 (238)
T PRK08264        150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGLD------------------APKASPADVARQILDALEAG  208 (238)
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccCC------------------cCCCCHHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999998753221                  12356777777777766543

>PRK08177 short chain dehydrogenase; Provisional

Probab=100.00  E-value=7.3e-31  Score=213.25  Aligned_cols=216  Identities=19%  Similarity=0.260  Sum_probs=173.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |+++|||++++||++++++|+++|++|++++|+.++.. .+.+.   .++.++.+|++|+++++++++.+.+  +++|++
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~-~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~--~~id~v   75 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDT-ALQAL---PGVHIEKLDMNDPASLDQLLQRLQG--QRFDLL   75 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchH-HHHhc---cccceEEcCCCCHHHHHHHHHHhhc--CCCCEE
Confidence            68999999999999999999999999998988866542 22221   3567889999999999999998854  479999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---CCCCchhhchHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---GKRRTDYHMSKHA  172 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---~~~~~~y~~sK~a  172 (264)
                      |||+|+......++.+.+.+++++.+++|+.+++.+++.++|+|++.  .+.+++++|..+..+   ...+..|+++|++
T Consensus        76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a  153 (225)
T PRK08177         76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPG--QGVLAFMSSQLGSVELPDGGEMPLYKASKAA  153 (225)
T ss_pred             EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhc--CCEEEEEccCccccccCCCCCccchHHHHHH
Confidence            99999875544467788999999999999999999999999999753  478999999876543   3456789999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      ++.|++.++.|++++||++|+|+||+++|++....               .|     .++++.++.++.++.+. ....|
T Consensus       154 ~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~~~---------------~~-----~~~~~~~~~~~~~~~~~-~~~~~  212 (225)
T PRK08177        154 LNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGGDN---------------AP-----LDVETSVKGLVEQIEAA-SGKGG  212 (225)
T ss_pred             HHHHHHHHHHHhhcCCeEEEEEcCCceecCCCCCC---------------CC-----CCHHHHHHHHHHHHHhC-CccCC
Confidence            99999999999999999999999999999975311               11     35667777777776543 33344


Q ss_pred             cE-EEecCe
Q 041914          253 HD-LVVDGG  260 (264)
Q Consensus       253 ~~-i~~dgG  260 (264)
                      +. ++.+|.
T Consensus       213 ~~~~~~~~~  221 (225)
T PRK08177        213 HRFIDYQGE  221 (225)
T ss_pred             CceeCcCCc
Confidence            44 555554

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.98  E-value=2.1e-30  Score=210.14  Aligned_cols=223  Identities=25%  Similarity=0.261  Sum_probs=191.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--C-CcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--V-GKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +.++|||+|+|||+++|.++..+|++|.+++|...+..+..+...-  + ..+.+..+|++|-+++..+++++...++.+
T Consensus        34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~  113 (331)
T KOG1210|consen   34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI  113 (331)
T ss_pred             ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence            7899999999999999999999999999999988777554443321  1 247789999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |.+|||||...++  .+++.+.++++..+++|+.++++.+++.+|.|++..+.|+|+.+||..+..+..++++|+++|+|
T Consensus       114 d~l~~cAG~~v~g--~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~a  191 (331)
T KOG1210|consen  114 DNLFCCAGVAVPG--LFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFA  191 (331)
T ss_pred             ceEEEecCccccc--ccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHH
Confidence            9999999998876  89999999999999999999999999999999998767899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +.+|+..+++|+.++||+|....|+.+.||.+.+.-. ..++........    ....++||+|.+++.-+..
T Consensus       192 lrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~-tkP~~t~ii~g~----ss~~~~e~~a~~~~~~~~r  259 (331)
T KOG1210|consen  192 LRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENK-TKPEETKIIEGG----SSVIKCEEMAKAIVKGMKR  259 (331)
T ss_pred             HHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccc-cCchheeeecCC----CCCcCHHHHHHHHHhHHhh
Confidence            9999999999999999999999999999998764422 222322222211    3447899999998876643

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.97  E-value=1.1e-30  Score=202.44  Aligned_cols=162  Identities=32%  Similarity=0.556  Sum_probs=141.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEE-EecC-chhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIV-IADI-QDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~-~~~~-~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      |+++||||++|||++++++|+++|..+++ +.|+ ..+..+.+...+  ...++.++++|++++++++++++++.+.+++
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            78999999999999999999999775444 4555 133333333222  2368999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|.....  ++.+.+.++|++++++|+.+++.+.+.++|    ++ .++||++||..+..+.+++..|+++|+
T Consensus        81 ld~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~----~~-~g~iv~~sS~~~~~~~~~~~~Y~aska  153 (167)
T PF00106_consen   81 LDILINNAGIFSDG--SLDDLSEEELERVFRVNLFGPFLLAKALLP----QG-GGKIVNISSIAGVRGSPGMSAYSASKA  153 (167)
T ss_dssp             ESEEEEECSCTTSB--SGGGSHHHHHHHHHHHHTHHHHHHHHHHHH----HT-TEEEEEEEEGGGTSSSTTBHHHHHHHH
T ss_pred             cccccccccccccc--ccccccchhhhhccccccceeeeeeehhee----cc-ccceEEecchhhccCCCCChhHHHHHH
Confidence            99999999998744  889999999999999999999999999999    23 689999999999999999999999999


Q ss_pred             HHHHHHHHHHHHh
Q 041914          172 AVIGLVRSASVQL  184 (264)
Q Consensus       172 al~~~~~~la~e~  184 (264)
                      |+++|+++++.|+
T Consensus       154 al~~~~~~la~e~  166 (167)
T PF00106_consen  154 ALRGLTQSLAAEL  166 (167)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhc
Confidence            9999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.97  E-value=6.2e-30  Score=209.97  Aligned_cols=200  Identities=17%  Similarity=0.165  Sum_probs=152.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+++++|+++||||++|||++++++|+++|++|+++.|+..+..+.   .... ...++.+|++|.+++.+       .+
T Consensus         9 ~~~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~---~~~~-~~~~~~~D~~~~~~~~~-------~~   77 (245)
T PRK12367          9 QSTWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES---NDES-PNEWIKWECGKEESLDK-------QL   77 (245)
T ss_pred             HHhhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh---hccC-CCeEEEeeCCCHHHHHH-------hc
Confidence            4568899999999999999999999999999988888876332221   1111 23578999999987654       34


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC--CCCcEEEEecCCCCCCCCCCCchhh
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~--~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++|++|||||+..     ..+.+.++|++.+++|+.+++++++.++|.|.++  ...+.+++.+|..+..+ +....|+
T Consensus        78 ~~iDilVnnAG~~~-----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~  151 (245)
T PRK12367         78 ASLDVLILNHGINP-----GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYE  151 (245)
T ss_pred             CCCCEEEECCccCC-----cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhH
Confidence            68999999999743     2346789999999999999999999999999763  11233444456555544 4667899


Q ss_pred             chHHHHHHHH---HHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          168 MSKHAVIGLV---RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       168 ~sK~al~~~~---~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +||+|+..+.   +.++.|+.+.+++++.+.||+++|++..                     ...++|||+|+.+++.+.
T Consensus       152 aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~~---------------------~~~~~~~~vA~~i~~~~~  210 (245)
T PRK12367        152 ISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELNP---------------------IGIMSADFVAKQILDQAN  210 (245)
T ss_pred             HHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccCc---------------------cCCCCHHHHHHHHHHHHh
Confidence            9999986544   4555566788999999999999988620                     124689999999999986


Q ss_pred             CCC
Q 041914          245 RDS  247 (264)
Q Consensus       245 ~~~  247 (264)
                      ...
T Consensus       211 ~~~  213 (245)
T PRK12367        211 LGL  213 (245)
T ss_pred             cCC
Confidence            543

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.97  E-value=1.2e-29  Score=205.62  Aligned_cols=215  Identities=21%  Similarity=0.218  Sum_probs=176.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |+++|||++++||++++++|+++|++|+++.|+.++.. .+..    ..+.++++|+++.++++++++++..  +++|++
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~-~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~--~~~d~v   74 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALA-ALQA----LGAEALALDVADPASVAGLAWKLDG--EALDAA   74 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHH-HHHh----ccceEEEecCCCHHHHHHHHHHhcC--CCCCEE
Confidence            68999999999999999999999999888888755432 2222    1356889999999999998877643  479999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC---chhhchHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR---TDYHMSKHA  172 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~---~~y~~sK~a  172 (264)
                      |||+|.......++.+.+.++|++.+++|+.+++.+++.++|+|.+.  .+++++++|..+..+..+.   ..|+++|++
T Consensus        75 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a  152 (222)
T PRK06953         75 VYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAA--GGVLAVLSSRMGSIGDATGTTGWLYRASKAA  152 (222)
T ss_pred             EECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhcc--CCeEEEEcCcccccccccCCCccccHHhHHH
Confidence            99999874433366778999999999999999999999999998663  5789999998776553322   359999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      ++.+++.++.++  .++++++|+||+++|++...                    ....++++.+..+..++.......+|
T Consensus       153 ~~~~~~~~~~~~--~~i~v~~v~Pg~i~t~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  210 (222)
T PRK06953        153 LNDALRAASLQA--RHATCIALHPGWVRTDMGGA--------------------QAALDPAQSVAGMRRVIAQATRRDNG  210 (222)
T ss_pred             HHHHHHHHhhhc--cCcEEEEECCCeeecCCCCC--------------------CCCCCHHHHHHHHHHHHHhcCcccCc
Confidence            999999999886  47999999999999997531                    11247889999999988777889999


Q ss_pred             cEEEecCee
Q 041914          253 HDLVVDGGF  261 (264)
Q Consensus       253 ~~i~~dgG~  261 (264)
                      +.+..|++.
T Consensus       211 ~~~~~~~~~  219 (222)
T PRK06953        211 RFFQYDGVE  219 (222)
T ss_pred             eEEeeCCcC
Confidence            999999864

>PRK08017 oxidoreductase; Provisional

Probab=99.97  E-value=1.1e-29  Score=209.98  Aligned_cols=223  Identities=22%  Similarity=0.239  Sum_probs=180.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~id~   94 (264)
                      |+++||||+|+||.++++.|+++|++|+++.|+.++.. .+.+    ..+..+.+|++|.+++..+++.+.+.. +++|+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~-~~~~----~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~   77 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVA-RMNS----LGFTGILLDLDDPESVERAADEVIALTDNRLYG   77 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhH-HHHh----CCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeE
Confidence            78999999999999999999999999888888765432 2221    136788999999999999999987754 68999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      +|||+|.....  ++.+.+.+++++.+++|+.+++.+++.++|.|.+.+ .+++|++||..+..+.+....|+++|++++
T Consensus        78 ii~~ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~  154 (256)
T PRK08017         78 LFNNAGFGVYG--PLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHG-EGRIVMTSSVMGLISTPGRGAYAASKYALE  154 (256)
T ss_pred             EEECCCCCCcc--chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCEEEEEcCcccccCCCCccHHHHHHHHHH
Confidence            99999976543  677889999999999999999999999999998876 689999999999989999999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      .++++++.++.+.+|+++++.||++.|++...........  . ........+..++|+|+++.+..++.+....
T Consensus       155 ~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~  226 (256)
T PRK08017        155 AWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDK--P-VENPGIAARFTLGPEAVVPKLRHALESPKPK  226 (256)
T ss_pred             HHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhcc--c-hhhhHHHhhcCCCHHHHHHHHHHHHhCCCCC
Confidence            9999999999999999999999999998765331110000  0 0000001123579999999999999765443

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=1.6e-31  Score=206.84  Aligned_cols=238  Identities=21%  Similarity=0.217  Sum_probs=185.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .+|++|+||+|.|||..++..+...+...+...+..... .+.+..... +.......|++...-+..+++..+++++..
T Consensus         5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~g-d~~v~~~g~~~e~~~l~al~e~~r~k~gkr   83 (253)
T KOG1204|consen    5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYG-DDFVHVVGDITEEQLLGALREAPRKKGGKR   83 (253)
T ss_pred             cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEec-CCcceechHHHHHHHHHHHHhhhhhcCCce
Confidence            578999999999999999998888877744433322111 111111111 234445567777788888888888898999


Q ss_pred             cEEEEcCCCCCCCCCCcc--CCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           93 DIMFSNAGILSSSDQTVL--DLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~--~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      |++|||||...+.. ...  ..+.++|++.|+.|+++.+.+.+.++|.++++...+.+||+||.++..|.++|+.||.+|
T Consensus        84 ~iiI~NAG~lgdvs-k~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav~p~~~wa~yc~~K  162 (253)
T KOG1204|consen   84 DIIIHNAGSLGDVS-KGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAVRPFSSWAAYCSSK  162 (253)
T ss_pred             eEEEecCCCccchh-hccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhhccccHHHHhhhhH
Confidence            99999999887753 333  678899999999999999999999999999874468999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC---CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG---MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +|.++|.+.+|.|-- .+|++.+++||.++|+|......   +.++.. ..+...... +++++|...++.+.+|+-...
T Consensus       163 aAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l-~~f~el~~~-~~ll~~~~~a~~l~~L~e~~~  239 (253)
T KOG1204|consen  163 AARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADL-KMFKELKES-GQLLDPQVTAKVLAKLLEKGD  239 (253)
T ss_pred             HHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHH-HHHHHHHhc-CCcCChhhHHHHHHHHHHhcC
Confidence            999999999999854 79999999999999999875542   333332 233333333 788999999999999985444


Q ss_pred             CCeeccEEEe
Q 041914          248 EFVTGHDLVV  257 (264)
Q Consensus       248 ~~~~G~~i~~  257 (264)
                       +.+||.++.
T Consensus       240 -f~sG~~vdy  248 (253)
T KOG1204|consen  240 -FVSGQHVDY  248 (253)
T ss_pred             -ccccccccc
Confidence             999998764

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2e-29  Score=208.69  Aligned_cols=219  Identities=25%  Similarity=0.307  Sum_probs=173.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||+++||++++++|+++|++|+++.|+..+.. .+.+...  ..++.++.+|++|++++.++++      +++
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~------~~i   74 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVT-ALRAEAARRGLALRVEKLDLTDAIDRAQAAE------WDV   74 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHHHhcCCcceEEEeeCCCHHHHHHHhc------CCC
Confidence            578999999999999999999999999888888765432 2222221  2357889999999988877653      479


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||+|.....  ++.+.+.+++++.+++|+.+++.+++.+++.+.+.+ .++||++||..+..+.++...|+++|++
T Consensus        75 d~vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~SS~~~~~~~~~~~~Y~~sK~a  151 (257)
T PRK09291         75 DVLLNNAGIGEAG--AVVDIPVELVRELFETNVFGPLELTQGFVRKMVARG-KGKVVFTSSMAGLITGPFTGAYCASKHA  151 (257)
T ss_pred             CEEEECCCcCCCc--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEcChhhccCCCCcchhHHHHHH
Confidence            9999999987654  788899999999999999999999999999998877 5899999999998888889999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC------hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP------ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ++.+++.++.++.+.||++++|+||++.|++........      ............|  ....+++|+++.++.++..
T Consensus       152 ~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~  228 (257)
T PRK09291        152 LEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFP--LEQFDPQEMIDAMVEVIPA  228 (257)
T ss_pred             HHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhcc--ccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999998754221100      0000010001112  2236899999998887753

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.97  E-value=7.2e-28  Score=195.59  Aligned_cols=219  Identities=23%  Similarity=0.252  Sum_probs=176.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .|++|||||+++||+++++.|+++ ++|+++.|+..+.. .+.+..  ..+.++.+|++|.++++++++++    +++|+
T Consensus         3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~-~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~----~~id~   74 (227)
T PRK08219          3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLD-ELAAEL--PGATPFPVDLTDPEAIAAAVEQL----GRLDV   74 (227)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHH-HHHHHh--ccceEEecCCCCHHHHHHHHHhc----CCCCE
Confidence            478999999999999999999999 99888888765432 222222  24678999999999988887654    47999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      +||++|.....  ++.+.+.++|.+.+++|+.+++.+++.+++.|+++  .+++|++||..+..+.++...|+.+|++++
T Consensus        75 vi~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~--~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~  150 (227)
T PRK08219         75 LVHNAGVADLG--PVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA--HGHVVFINSGAGLRANPGWGSYAASKFALR  150 (227)
T ss_pred             EEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC--CCeEEEEcchHhcCcCCCCchHHHHHHHHH
Confidence            99999986543  67778999999999999999999999999999875  379999999999888889999999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccE
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD  254 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~  254 (264)
                      .+++.++.++... |+++++.||++.+++......    .    .....+. +++++++|+++.+++++...   ..|++
T Consensus       151 ~~~~~~~~~~~~~-i~~~~i~pg~~~~~~~~~~~~----~----~~~~~~~-~~~~~~~dva~~~~~~l~~~---~~~~~  217 (227)
T PRK08219        151 ALADALREEEPGN-VRVTSVHPGRTDTDMQRGLVA----Q----EGGEYDP-ERYLRPETVAKAVRFAVDAP---PDAHI  217 (227)
T ss_pred             HHHHHHHHHhcCC-ceEEEEecCCccchHhhhhhh----h----hccccCC-CCCCCHHHHHHHHHHHHcCC---CCCcc
Confidence            9999999988766 999999999998876432210    0    0011122 56789999999999999643   24566


Q ss_pred             EEec
Q 041914          255 LVVD  258 (264)
Q Consensus       255 i~~d  258 (264)
                      ++++
T Consensus       218 ~~~~  221 (227)
T PRK08219        218 TEVV  221 (227)
T ss_pred             ceEE
Confidence            5554

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.96  E-value=9.1e-27  Score=202.12  Aligned_cols=199  Identities=20%  Similarity=0.196  Sum_probs=152.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..+++|+++||||++|||++++++|+++|++|+++.|+.++..+.....  ...+..+.+|++|.+++.+.+       +
T Consensus       174 ~sl~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~--~~~v~~v~~Dvsd~~~v~~~l-------~  244 (406)
T PRK07424        174 LSLKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGE--DLPVKTLHWQVGQEAALAELL-------E  244 (406)
T ss_pred             cCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhc--CCCeEEEEeeCCCHHHHHHHh-------C
Confidence            4578999999999999999999999999999988888765543322111  124678899999998776543       5


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC---CcEEEEecCCCCCCCCCCCchhh
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV---RGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~---~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++|++|||||+...     .+.+.+++++++++|+.+++.+++.++|.|++++.   .+.+|++|+ .. ...+....|+
T Consensus       245 ~IDiLInnAGi~~~-----~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~  317 (406)
T PRK07424        245 KVDILIINHGINVH-----GERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYE  317 (406)
T ss_pred             CCCEEEECCCcCCC-----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHH
Confidence            89999999997532     25788999999999999999999999999987541   234666654 33 3334567799


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+..|+. +..+.  .++.+..+.||+++|++..                     ...++||++|+.+++.+..+.
T Consensus       318 ASKaAl~~l~~-l~~~~--~~~~I~~i~~gp~~t~~~~---------------------~~~~spe~vA~~il~~i~~~~  373 (406)
T PRK07424        318 LSKRALGDLVT-LRRLD--APCVVRKLILGPFKSNLNP---------------------IGVMSADWVAKQILKLAKRDF  373 (406)
T ss_pred             HHHHHHHHHHH-HHHhC--CCCceEEEEeCCCcCCCCc---------------------CCCCCHHHHHHHHHHHHHCCC
Confidence            99999999984 44442  4677888899999887520                     124699999999999997665


Q ss_pred             CC
Q 041914          248 EF  249 (264)
Q Consensus       248 ~~  249 (264)
                      .+
T Consensus       374 ~~  375 (406)
T PRK07424        374 RN  375 (406)
T ss_pred             CE
Confidence            54

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.94  E-value=5.5e-25  Score=223.02  Aligned_cols=182  Identities=20%  Similarity=0.241  Sum_probs=154.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCch------------------------------------------
Q 041914           14 EGKVAIITGGASGIGETTARLFADH-GARMIVIADIQD------------------------------------------   50 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~------------------------------------------   50 (264)
                      .++++|||||++|||.+++++|+++ |++|+++.|+..                                          
T Consensus      1996 ~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~ 2075 (2582)
T TIGR02813      1996 SDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRP 2075 (2582)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhcccc
Confidence            5899999999999999999999998 699888888720                                          


Q ss_pred             -----hhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhH
Q 041914           51 -----ELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN  124 (264)
Q Consensus        51 -----~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n  124 (264)
                           +..+.+.+... ..++.++.||++|.++++++++++.+. ++||+||||||+....  .+.+.+.++|+++|++|
T Consensus      2076 ~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~-g~IDgVVhnAGv~~~~--~i~~~t~e~f~~v~~~n 2152 (2582)
T TIGR02813      2076 VLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKT-LQITGIIHGAGVLADK--HIQDKTLEEFNAVYGTK 2152 (2582)
T ss_pred             cchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHh-CCCcEEEECCccCCCC--CcccCCHHHHHHHHHHH
Confidence                 00011111111 246889999999999999999999877 6899999999987654  88999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccc
Q 041914          125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLT  204 (264)
Q Consensus       125 ~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  204 (264)
                      +.|.+++++++.+.+     .++||++||..+..+.+++..|+++|++++.+++.++.++.  +++|++|+||+++|+|.
T Consensus      2153 v~G~~~Ll~al~~~~-----~~~IV~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2153 VDGLLSLLAALNAEN-----IKLLALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             HHHHHHHHHHHHHhC-----CCeEEEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCcc
Confidence            999999999887643     34899999999999999999999999999999999999874  49999999999999986


Q ss_pred             c
Q 041914          205 C  205 (264)
Q Consensus       205 ~  205 (264)
                      .
T Consensus      2226 ~ 2226 (2582)
T TIGR02813      2226 N 2226 (2582)
T ss_pred             c
Confidence            3

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.92  E-value=1.4e-23  Score=163.35  Aligned_cols=174  Identities=22%  Similarity=0.297  Sum_probs=143.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHH---HHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQ---VATSI-GVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      |+++||||+++||.+++++|+++|+. |+++.|+..+....   +.+.. ...++.++.+|++++++++++++++.+.++
T Consensus         1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   80 (180)
T smart00822        1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG   80 (180)
T ss_pred             CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999975 56666654432211   11111 124678899999999999999999998899


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++|||+|.....  ++.+.+.+++++.+++|+.+++.+++.+.    +.+ .+++++++|..+..+.+++..|+++|
T Consensus        81 ~id~li~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~ii~~ss~~~~~~~~~~~~y~~sk  153 (180)
T smart00822       81 PLRGVIHAAGVLDDG--LLANLTPERFAAVLAPKVDGAWNLHELTR----DLP-LDFFVLFSSVAGVLGNPGQANYAAAN  153 (180)
T ss_pred             CeeEEEEccccCCcc--ccccCCHHHHHHhhchHhHHHHHHHHHhc----cCC-cceEEEEccHHHhcCCCCchhhHHHH
Confidence            999999999986543  67788999999999999999999999883    233 57999999999988999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCccc
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLA  200 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~  200 (264)
                      ++++.+++.++.    .++++.++.||++.
T Consensus       154 ~~~~~~~~~~~~----~~~~~~~~~~g~~~  179 (180)
T smart00822      154 AFLDALAAHRRA----RGLPATSINWGAWA  179 (180)
T ss_pred             HHHHHHHHHHHh----cCCceEEEeecccc
Confidence            999999977653    48889999999875

It uses NADPH to reduce the keto group to a hydroxy group.

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.92  E-value=8.6e-23  Score=174.55  Aligned_cols=214  Identities=15%  Similarity=0.158  Sum_probs=155.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++|++|||||+|+||++++++|+++|  ++|+++.|+.... ..+.......++.++.+|++|.+++.++++       
T Consensus         2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~-~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~-------   73 (324)
T TIGR03589         2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQ-WEMQQKFPAPCLRFFIGDVRDKERLTRALR-------   73 (324)
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHH-HHHHHHhCCCcEEEEEccCCCHHHHHHHHh-------
Confidence            468999999999999999999999986  6777777654432 223333322468899999999999888765       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|++||+||....   +..+.+   .++.+++|+.+++++++++.+    .+ .++||++||.....|   ...|+++|
T Consensus        74 ~iD~Vih~Ag~~~~---~~~~~~---~~~~~~~Nv~g~~~ll~aa~~----~~-~~~iV~~SS~~~~~p---~~~Y~~sK  139 (324)
T TIGR03589        74 GVDYVVHAAALKQV---PAAEYN---PFECIRTNINGAQNVIDAAID----NG-VKRVVALSTDKAANP---INLYGATK  139 (324)
T ss_pred             cCCEEEECcccCCC---chhhcC---HHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeCCCCCCC---CCHHHHHH
Confidence            58999999997532   222223   357899999999999999865    23 469999999765433   46799999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC-C--CCC-----CCCCCCChHHHHHHHHHH
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE-P--QTP-----LEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~--~~~-----~~~~~~~~edva~~~~~l  242 (264)
                      ++.+.+++.++.+++..|++++++.||.+.++...     ..+.+..... .  ..|     ..+.++.++|++++++.+
T Consensus       140 ~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~-----~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~a  214 (324)
T TIGR03589       140 LASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGS-----VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKS  214 (324)
T ss_pred             HHHHHHHHHHHhhccccCcEEEEEeecceeCCCCC-----cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHH
Confidence            99999999998888888999999999999886311     1112221111 1  111     113478999999999998


Q ss_pred             hCCCCCCeeccEEE
Q 041914          243 ACRDSEFVTGHDLV  256 (264)
Q Consensus       243 ~s~~~~~~~G~~i~  256 (264)
                      +...   ..|+++.
T Consensus       215 l~~~---~~~~~~~  225 (324)
T TIGR03589       215 LERM---LGGEIFV  225 (324)
T ss_pred             HhhC---CCCCEEc
Confidence            8532   2356663

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.92  E-value=5.9e-24  Score=167.15  Aligned_cols=194  Identities=21%  Similarity=0.225  Sum_probs=161.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCc-----EEEEecCchhhHHHHHhhh---CC--CcEEEEEecCCCHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGAR-----MIVIADIQDELGRQVATSI---GV--GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~-----v~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      .|++||||+++|||.+||.+|.+...+     +++.+|+-++..+...+..   ..  -++.++..|+++..++.++..+
T Consensus         3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~d   82 (341)
T KOG1478|consen    3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKD   82 (341)
T ss_pred             ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHH
Confidence            489999999999999999999998665     4556677666544444333   21  3688899999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCC-------------------------CccCCCHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQ-------------------------TVLDLDFSAFDRLFAINVRGMAACVKHAARVM  139 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~-------------------------~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~  139 (264)
                      ++++|.++|.++.|||++..+.-                         .....+.+++..+|+.||+|+|.+++.+.|++
T Consensus        83 i~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll  162 (341)
T KOG1478|consen   83 IKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLL  162 (341)
T ss_pred             HHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHh
Confidence            99999999999999998765421                         11134567788899999999999999999999


Q ss_pred             HcCCCCcEEEEecCCCCCCC---------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC
Q 041914          140 VEGGVRGSIVCTASVAGSCG---------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG  209 (264)
Q Consensus       140 ~~~~~~~~iv~iss~~~~~~---------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~  209 (264)
                      ..+. +..+|++||..+...         ..+..+|..||.+++-+.-++-+.+.+.|+.-++++||...|.++.....
T Consensus       163 ~~~~-~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l~  240 (341)
T KOG1478|consen  163 CHSD-NPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYLN  240 (341)
T ss_pred             hcCC-CCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhhh
Confidence            9887 679999999988642         46778899999999999999999999999999999999999998876653

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.91  E-value=9.5e-23  Score=181.38  Aligned_cols=220  Identities=17%  Similarity=0.183  Sum_probs=158.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----------CCcEEEEEecCCCHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----------VGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      .+||++|||||+|+||++++++|+++|++|+++.|+.+...........          ..++.++.+|++|.+++.+.+
T Consensus        78 ~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aL  157 (576)
T PLN03209         78 KDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPAL  157 (576)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHh
Confidence            4789999999999999999999999999998888877655333221110          125789999999998876543


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCC
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGK  161 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~  161 (264)
                             +++|+||||+|....   .     ..++...+++|+.+..++++++..    .+ .++||++||..+. .+.+
T Consensus       158 -------ggiDiVVn~AG~~~~---~-----v~d~~~~~~VN~~Gt~nLl~Aa~~----ag-VgRIV~VSSiga~~~g~p  217 (576)
T PLN03209        158 -------GNASVVICCIGASEK---E-----VFDVTGPYRIDYLATKNLVDAATV----AK-VNHFILVTSLGTNKVGFP  217 (576)
T ss_pred             -------cCCCEEEEccccccc---c-----ccchhhHHHHHHHHHHHHHHHHHH----hC-CCEEEEEccchhcccCcc
Confidence                   589999999987532   1     124778899999999999988754    23 5799999998764 2222


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      . ..|. +|+++..+.+.+..+++..||+++.|+||++.+++.....  . ... .......+. ++.++.+|||+.++|
T Consensus       218 ~-~~~~-sk~~~~~~KraaE~~L~~sGIrvTIVRPG~L~tp~d~~~~--t-~~v-~~~~~d~~~-gr~isreDVA~vVvf  290 (576)
T PLN03209        218 A-AILN-LFWGVLCWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--T-HNL-TLSEEDTLF-GGQVSNLQVAELMAC  290 (576)
T ss_pred             c-cchh-hHHHHHHHHHHHHHHHHHcCCCEEEEECCeecCCcccccc--c-cce-eeccccccC-CCccCHHHHHHHHHH
Confidence            2 2244 7888888999999999999999999999999887543110  0 000 111112344 677899999999999


Q ss_pred             HhCCCCCCeeccEEEecCe
Q 041914          242 LACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG  260 (264)
                      ++++.. .-.+++|.+-.+
T Consensus       291 Lasd~~-as~~kvvevi~~  308 (576)
T PLN03209        291 MAKNRR-LSYCKVVEVIAE  308 (576)
T ss_pred             HHcCch-hccceEEEEEeC
Confidence            997432 223555555443

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.91  E-value=2.2e-22  Score=172.27  Aligned_cols=223  Identities=17%  Similarity=0.214  Sum_probs=159.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---C-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---G-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+|++|||||+|+||++++++|+++|++|+++.|+....... ....   . ..++.++.+|++|.+++.++++      
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~------   76 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKT-DHLLALDGAKERLKLFKADLLDEGSFELAID------   76 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhH-HHHHhccCCCCceEEEeCCCCCchHHHHHHc------
Confidence            378999999999999999999999999988777765543221 1111   1 1368889999999998888775      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC--------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK--------  161 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~--------  161 (264)
                       ++|++|||||....      ..+.+.+.+.+++|+.+++++++++.+.+   + .++||++||..+..+..        
T Consensus        77 -~~d~vih~A~~~~~------~~~~~~~~~~~~~n~~g~~~ll~a~~~~~---~-~~~iv~~SS~~~~~~~~~~~~~~~~  145 (325)
T PLN02989         77 -GCETVFHTASPVAI------TVKTDPQVELINPAVNGTINVLRTCTKVS---S-VKRVILTSSMAAVLAPETKLGPNDV  145 (325)
T ss_pred             -CCCEEEEeCCCCCC------CCCCChHHHHHHHHHHHHHHHHHHHHHcC---C-ceEEEEecchhheecCCccCCCCCc
Confidence             68999999996432      12344678999999999999999987653   2 46999999986542210        


Q ss_pred             --------------CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC--
Q 041914          162 --------------RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL--  225 (264)
Q Consensus       162 --------------~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--  225 (264)
                                    ....|+.||.+.+.+++.++.++   ++.+..+.|+.+.+|.....................+.  
T Consensus       146 ~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~  222 (325)
T PLN02989        146 VDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDN---EIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNT  222 (325)
T ss_pred             cCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHc---CCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCC
Confidence                          12469999999999998887664   79999999999999865422111112222222222222  


Q ss_pred             -CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          226 -EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       226 -~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                       .+.++.++|+|++++.++....  ..| .++++|+
T Consensus       223 ~~r~~i~v~Dva~a~~~~l~~~~--~~~-~~ni~~~  255 (325)
T PLN02989        223 THHRFVDVRDVALAHVKALETPS--ANG-RYIIDGP  255 (325)
T ss_pred             cCcCeeEHHHHHHHHHHHhcCcc--cCc-eEEEecC
Confidence             1467889999999998875432  234 6788654

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.91  E-value=2.6e-22  Score=173.41  Aligned_cols=232  Identities=13%  Similarity=0.038  Sum_probs=162.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +++|++|||||+|+||.+++++|+++|++|+++.|+...............++.++.+|++|.+++.+++++.     ++
T Consensus         2 ~~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~   76 (349)
T TIGR02622         2 WQGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEF-----KP   76 (349)
T ss_pred             cCCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhc-----CC
Confidence            5689999999999999999999999999988888776543222111111235778999999999999888854     68


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------CC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------GG  160 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------~~  160 (264)
                      |++||+|+....      ..+.+++...+++|+.+++++++++.+   ... .+++|++||.....            +.
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~N~~g~~~ll~a~~~---~~~-~~~iv~~SS~~vyg~~~~~~~~~e~~~~  146 (349)
T TIGR02622        77 EIVFHLAAQPLV------RKSYADPLETFETNVMGTVNLLEAIRA---IGS-VKAVVNVTSDKCYRNDEWVWGYRETDPL  146 (349)
T ss_pred             CEEEECCccccc------ccchhCHHHHHHHhHHHHHHHHHHHHh---cCC-CCEEEEEechhhhCCCCCCCCCccCCCC
Confidence            999999995422      234456788999999999999998742   121 35899999964321            23


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCc----CCceEEEeeCCcccCcccccccCCChHHHHhhcCCC-------CCCCCCC
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGV----HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ-------TPLEGVV  229 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~----~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~  229 (264)
                      .+...|+.+|.+.+.+++.++.++.+    ++++++.+.|+.+.++....... ..+.+.......       ....+.+
T Consensus       147 ~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~-~~~~~~~~~~~g~~~~~~~g~~~rd~  225 (349)
T TIGR02622       147 GGHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDR-LIPDVIRAFSSNKIVIIRNPDATRPW  225 (349)
T ss_pred             CCCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhh-hhHHHHHHHhcCCCeEECCCCcccce
Confidence            45678999999999999999988754    48999999999998874211000 111111111111       1122457


Q ss_pred             CChHHHHHHHHHHhCCC--CCCeeccEEEecCe
Q 041914          230 LRAGHVADAVLFLACRD--SEFVTGHDLVVDGG  260 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~--~~~~~G~~i~~dgG  260 (264)
                      +..+|++++++.++...  .....|+.+++.+|
T Consensus       226 i~v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~  258 (349)
T TIGR02622       226 QHVLEPLSGYLLLAEKLFTGQAEFAGAWNFGPR  258 (349)
T ss_pred             eeHHHHHHHHHHHHHHHhhcCccccceeeeCCC
Confidence            88999999998876431  11123578998754

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.88  E-value=7.6e-21  Score=161.36  Aligned_cols=219  Identities=14%  Similarity=0.058  Sum_probs=155.2

Q ss_pred             CCCcEEEEeCCCChhHHH--HHHHHHHcCCcEEEEecCchhhH-----------HHHHhhhC--CCcEEEEEecCCCHHH
Q 041914           13 LEGKVAIITGGASGIGET--TARLFADHGARMIVIADIQDELG-----------RQVATSIG--VGKCHYVHCDVTNECQ   77 (264)
Q Consensus        13 l~~k~vlItGas~giG~~--ia~~l~~~g~~v~~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~D~s~~~~   77 (264)
                      -.+|++||||+++|+|.+  +|+.| +.|++++++++..++..           +.+.+...  ...+..+.||++++++
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            457999999999999999  89999 99999888875322211           11222221  2356789999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCC-------------------CC-------------ccCCCHHHHHHHHhhHH
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSD-------------------QT-------------VLDLDFSAFDRLFAINV  125 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~-------------------~~-------------~~~~~~~~~~~~~~~n~  125 (264)
                      ++++++++.+.+|++|+||||+|......                   .+             +...+.++++..+  ++
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv--~v  195 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTV--KV  195 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHH--Hh
Confidence            99999999999999999999999774321                   01             1123444444433  33


Q ss_pred             HHH-----HHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC--chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCc
Q 041914          126 RGM-----AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG  198 (264)
Q Consensus       126 ~~~-----~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~  198 (264)
                      +|.     |.-.....+.|.+   .+++|-.|........|.+  ...+.+|++|+.-++.++.++++.|||+|++.+|+
T Consensus       196 Mggedw~~Wi~al~~a~lla~---g~~~va~TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~  272 (398)
T PRK13656        196 MGGEDWELWIDALDEAGVLAE---GAKTVAYSYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKA  272 (398)
T ss_pred             hccchHHHHHHHHHhcccccC---CcEEEEEecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCc
Confidence            333     2224444555543   5799999999988887777  48899999999999999999999999999999999


Q ss_pred             ccCcccccccCCCh--HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          199 LATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       199 v~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +.|...+....++.  ..+...++       .-.+.|.+.+.+..|.+
T Consensus       273 ~~T~Ass~Ip~~~ly~~~l~kvmk-------~~g~he~~ieq~~rl~~  313 (398)
T PRK13656        273 VVTQASSAIPVMPLYISLLFKVMK-------EKGTHEGCIEQIYRLFS  313 (398)
T ss_pred             ccchhhhcCCCcHHHHHHHHHHHH-------hcCCCCChHHHHHHHHH
Confidence            99987765543321  12222222       22344566666666664

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.88  E-value=3e-21  Score=151.41  Aligned_cols=173  Identities=24%  Similarity=0.388  Sum_probs=130.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCch---hhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           17 VAIITGGASGIGETTARLFADHGAR-MIVIADIQD---ELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++|||||.+|||..++++|+++|.. ++++.|+..   +..+.+.+... ..++.++++|++|++++.++++++.+++++
T Consensus         2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~   81 (181)
T PF08659_consen    2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP   81 (181)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred             EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence            7899999999999999999999774 666677622   22223333332 358999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      ||.+||++|...+.  ++.+.+.+++++++...+.+..++.+.+.+    .. -..+|..||+.+..+.++...|+++.+
T Consensus        82 i~gVih~ag~~~~~--~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~----~~-l~~~i~~SSis~~~G~~gq~~YaaAN~  154 (181)
T PF08659_consen   82 IDGVIHAAGVLADA--PIQDQTPDEFDAVLAPKVRGLWNLHEALEN----RP-LDFFILFSSISSLLGGPGQSAYAAANA  154 (181)
T ss_dssp             EEEEEE-------B---GCC--HHHHHHHHHHHHHHHHHHHHHHTT----TT-TSEEEEEEEHHHHTT-TTBHHHHHHHH
T ss_pred             cceeeeeeeeeccc--ccccCCHHHHHHHHhhhhhHHHHHHHHhhc----CC-CCeEEEECChhHhccCcchHhHHHHHH
Confidence            99999999997765  899999999999999999999999888744    22 569999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCccc
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLA  200 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~  200 (264)
                      .++.|++.....    |.++.+|.-|+.+
T Consensus       155 ~lda~a~~~~~~----g~~~~sI~wg~W~  179 (181)
T PF08659_consen  155 FLDALARQRRSR----GLPAVSINWGAWD  179 (181)
T ss_dssp             HHHHHHHHHHHT----TSEEEEEEE-EBS
T ss_pred             HHHHHHHHHHhC----CCCEEEEEccccC
Confidence            999999876543    6778888877553

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.88  E-value=5.1e-21  Score=164.82  Aligned_cols=231  Identities=16%  Similarity=0.103  Sum_probs=154.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh----HHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL----GRQVATSI--GVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      .++++|++|||||+|+||.+++++|+++|++|+++.|+....    .+.+.+..  ...++.++.+|++|.+++.++++.
T Consensus         2 ~~~~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~   81 (340)
T PLN02653          2 GDPPRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD   81 (340)
T ss_pred             CCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH
Confidence            467899999999999999999999999999988888765421    11111111  113578999999999999988886


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------  158 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------  158 (264)
                      .     ++|+|||+|+.....      ...+..+..+++|+.++.++++++.+...+++...++|++||.....      
T Consensus        82 ~-----~~d~Vih~A~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~  150 (340)
T PLN02653         82 I-----KPDEVYNLAAQSHVA------VSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQ  150 (340)
T ss_pred             c-----CCCEEEECCcccchh------hhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCC
Confidence            5     589999999975432      12234577889999999999999988765422113788888753221      


Q ss_pred             ----CCCCCchhhchHHHHHHHHHHHHHHhCc---CCceEEEeeCCcccCcccccccCCChHHHHh---------hcCCC
Q 041914          159 ----GGKRRTDYHMSKHAVIGLVRSASVQLGV---HGIRVNCVSPHGLATPLTCHAYGMPADEVEK---------LFEPQ  222 (264)
Q Consensus       159 ----~~~~~~~y~~sK~al~~~~~~la~e~~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---------~~~~~  222 (264)
                          +..+...|+.||.+.+.+++.++.+++-   .++.+|.+.|+.-.+.+..     .......         .+...
T Consensus       151 ~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~  225 (340)
T PLN02653        151 SETTPFHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTR-----KITRAVGRIKVGLQKKLFLGN  225 (340)
T ss_pred             CCCCCCCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchh-----HHHHHHHHHHcCCCCceEeCC
Confidence                1234678999999999999999888642   2334455556533221100     0000000         00011


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          223 TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       223 ~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ....+.++.++|++++++.++....    +..+++.+|.
T Consensus       226 g~~~rd~i~v~D~a~a~~~~~~~~~----~~~yni~~g~  260 (340)
T PLN02653        226 LDASRDWGFAGDYVEAMWLMLQQEK----PDDYVVATEE  260 (340)
T ss_pred             CcceecceeHHHHHHHHHHHHhcCC----CCcEEecCCC
Confidence            1111467899999999999886431    4568887664

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.87  E-value=5.1e-20  Score=157.44  Aligned_cols=224  Identities=15%  Similarity=0.157  Sum_probs=155.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH--HHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+||++|||||+|+||.+++++|+++|++|+++.|+..+...  .+..... ..++.++.+|++|.+++.++++      
T Consensus         3 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~------   76 (322)
T PLN02986          3 GGGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE------   76 (322)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh------
Confidence            468999999999999999999999999998888887654321  1111111 2367889999999998888876      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-CC--------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-GG--------  160 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~~--------  160 (264)
                       ++|++||+|+.....   .    .+.+.+.+++|+.++.++++++...   .+ .++||++||..... +.        
T Consensus        77 -~~d~vih~A~~~~~~---~----~~~~~~~~~~nv~gt~~ll~~~~~~---~~-v~rvV~~SS~~~~~~~~~~~~~~~~  144 (322)
T PLN02986         77 -GCDAVFHTASPVFFT---V----KDPQTELIDPALKGTINVLNTCKET---PS-VKRVILTSSTAAVLFRQPPIEANDV  144 (322)
T ss_pred             -CCCEEEEeCCCcCCC---C----CCchhhhhHHHHHHHHHHHHHHHhc---CC-ccEEEEecchhheecCCccCCCCCC
Confidence             589999999864321   1    1124568999999999999887432   12 45999999986431 10        


Q ss_pred             -------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC---
Q 041914          161 -------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP---  224 (264)
Q Consensus       161 -------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---  224 (264)
                                   .+...|+.||.+.+.+++.+..++   ++.+.+++|+.+.+|......................   
T Consensus       145 ~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~  221 (322)
T PLN02986        145 VDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDN---GIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNN  221 (322)
T ss_pred             cCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHh---CCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCC
Confidence                         023569999999999888877654   7999999999999986432211112222222221111   


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ....++.++|+|++++.++....  ..| .++++|+
T Consensus       222 ~~~~~v~v~Dva~a~~~al~~~~--~~~-~yni~~~  254 (322)
T PLN02986        222 RFYRFVDVRDVALAHIKALETPS--ANG-RYIIDGP  254 (322)
T ss_pred             cCcceeEHHHHHHHHHHHhcCcc--cCC-cEEEecC
Confidence            11358899999999999885432  234 6777554

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.87  E-value=3.6e-20  Score=160.45  Aligned_cols=228  Identities=15%  Similarity=0.103  Sum_probs=158.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH--HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++|||||+|+||.++++.|.++|++++++.++..+..  ..+.......++.++.+|++|.++++++++..     ++|
T Consensus         2 ~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~D   76 (355)
T PRK10217          2 RKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEH-----QPD   76 (355)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhc-----CCC
Confidence            58999999999999999999999998666555433211  11111111235778899999999988887742     699


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHc---C-CCCcEEEEecCCCCCC-----------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVE---G-GVRGSIVCTASVAGSC-----------  158 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~---~-~~~~~iv~iss~~~~~-----------  158 (264)
                      +|||+||....      +.+.++++..+++|+.+++++++++.+.|..   . ....++|++||.....           
T Consensus        77 ~Vih~A~~~~~------~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E  150 (355)
T PRK10217         77 CVMHLAAESHV------DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTE  150 (355)
T ss_pred             EEEECCcccCc------chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCC
Confidence            99999986532      1344567899999999999999999876431   1 1034899999854321           


Q ss_pred             --CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHH-HhhcCCC-CC------CCCC
Q 041914          159 --GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV-EKLFEPQ-TP------LEGV  228 (264)
Q Consensus       159 --~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~~-~~------~~~~  228 (264)
                        +..+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|....  ....... ....... .+      ....
T Consensus       151 ~~~~~p~s~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~--~~~~~~~~~~~~~~~~~~~~g~g~~~~~  225 (355)
T PRK10217        151 TTPYAPSSPYSASKASSDHLVRAWLRTY---GLPTLITNCSNNYGPYHFP--EKLIPLMILNALAGKPLPVYGNGQQIRD  225 (355)
T ss_pred             CCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCeEEEeeeeeeCCCCCc--ccHHHHHHHHHhcCCCceEeCCCCeeeC
Confidence              23457789999999999999998775   6788888888887764311  0011111 1111111 11      1245


Q ss_pred             CCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       229 ~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++.++|+++++..++...   ..|+.|++.+|..
T Consensus       226 ~i~v~D~a~a~~~~~~~~---~~~~~yni~~~~~  256 (355)
T PRK10217        226 WLYVEDHARALYCVATTG---KVGETYNIGGHNE  256 (355)
T ss_pred             cCcHHHHHHHHHHHHhcC---CCCCeEEeCCCCc
Confidence            889999999999888542   3578899987754

>PLN02214 cinnamoyl-CoA reductase

Probab=99.86  E-value=2.3e-19  Score=154.57  Aligned_cols=218  Identities=16%  Similarity=0.159  Sum_probs=152.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH-HHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ-VATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++|++|||||+|.||++++++|+++|++|+++.|........ +..... ..++.++.+|++|.+++.++++       
T Consensus         8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   80 (342)
T PLN02214          8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-------   80 (342)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-------
Confidence            5689999999999999999999999999998888875542221 111111 1357889999999998888776       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC----------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG----------  160 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~----------  160 (264)
                      ++|+|||+|+...           +++.+.+++|+.++.++++++..    .+ .+++|++||..+..+.          
T Consensus        81 ~~d~Vih~A~~~~-----------~~~~~~~~~nv~gt~~ll~aa~~----~~-v~r~V~~SS~~avyg~~~~~~~~~~~  144 (342)
T PLN02214         81 GCDGVFHTASPVT-----------DDPEQMVEPAVNGAKFVINAAAE----AK-VKRVVITSSIGAVYMDPNRDPEAVVD  144 (342)
T ss_pred             cCCEEEEecCCCC-----------CCHHHHHHHHHHHHHHHHHHHHh----cC-CCEEEEeccceeeeccCCCCCCcccC
Confidence            6899999998642           13567899999999999998753    23 4589999996533210          


Q ss_pred             -----------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC----CC
Q 041914          161 -----------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT----PL  225 (264)
Q Consensus       161 -----------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~~  225 (264)
                                 .+...|+.||.+.+.+++.++.++   |+++..+.|+.+..|................+....    ..
T Consensus       145 E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~  221 (342)
T PLN02214        145 ESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEK---GVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANL  221 (342)
T ss_pred             cccCCChhhccccccHHHHHHHHHHHHHHHHHHHc---CCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCC
Confidence                       123479999999999998887764   899999999999888532111101111111111111    11


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      .+.++.++|+|++++.++...  ...| .+++.+
T Consensus       222 ~~~~i~V~Dva~a~~~al~~~--~~~g-~yn~~~  252 (342)
T PLN02214        222 TQAYVDVRDVALAHVLVYEAP--SASG-RYLLAE  252 (342)
T ss_pred             CcCeeEHHHHHHHHHHHHhCc--ccCC-cEEEec
Confidence            246789999999999988543  2234 455543

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.86  E-value=2.1e-19  Score=159.35  Aligned_cols=234  Identities=12%  Similarity=0.027  Sum_probs=158.6

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc---hhh-------------HHHHHh--hhCCCcEEEEEe
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ---DEL-------------GRQVAT--SIGVGKCHYVHC   70 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~---~~~-------------~~~~~~--~~~~~~~~~~~~   70 (264)
                      ...+++++++|||||+|+||++++++|+++|++|+++.+..   .+.             ...+..  .....++.++.+
T Consensus        41 ~~~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~  120 (442)
T PLN02572         41 SSSSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVG  120 (442)
T ss_pred             CCccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEEC
Confidence            35568899999999999999999999999999988875321   110             011111  011235789999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEE
Q 041914           71 DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVC  150 (264)
Q Consensus        71 D~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~  150 (264)
                      |++|.+++.+++++.     ++|+|||+|+....   +....++++++..+++|+.+++++++++...    +...++|+
T Consensus       121 Dl~d~~~v~~~l~~~-----~~D~ViHlAa~~~~---~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~----gv~~~~V~  188 (442)
T PLN02572        121 DICDFEFLSEAFKSF-----EPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF----APDCHLVK  188 (442)
T ss_pred             CCCCHHHHHHHHHhC-----CCCEEEECCCcccC---hhhhcChhhHHHHHHHHHHHHHHHHHHHHHh----CCCccEEE
Confidence            999999999888864     68999999976432   3344556678888999999999999987542    21248999


Q ss_pred             ecCCCCCC------------------------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccc
Q 041914          151 TASVAGSC------------------------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCH  206 (264)
Q Consensus       151 iss~~~~~------------------------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~  206 (264)
                      +||...+.                        +..+...|+.||.+.+.+++.++..   .|+.+..+.|+.+..+....
T Consensus       189 ~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~---~gl~~v~lR~~~vyGp~~~~  265 (442)
T PLN02572        189 LGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKA---WGIRATDLNQGVVYGVRTDE  265 (442)
T ss_pred             EecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHh---cCCCEEEEecccccCCCCcc
Confidence            99876431                        1123467999999999999887766   48999999999998875321


Q ss_pred             cc---------------CCChHHHH-hhcCCC-CC------CCCCCCChHHHHHHHHHHhCCCCCCeec--cEEEecC
Q 041914          207 AY---------------GMPADEVE-KLFEPQ-TP------LEGVVLRAGHVADAVLFLACRDSEFVTG--HDLVVDG  259 (264)
Q Consensus       207 ~~---------------~~~~~~~~-~~~~~~-~~------~~~~~~~~edva~~~~~l~s~~~~~~~G--~~i~~dg  259 (264)
                      ..               ........ ...... .+      ..+.++.++|++++++.++...  ...|  .++++.+
T Consensus       266 ~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~--~~~g~~~i~Nigs  341 (442)
T PLN02572        266 TMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANP--AKPGEFRVFNQFT  341 (442)
T ss_pred             cccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhCh--hhcCceeEEEeCC
Confidence            00               00011111 111111 11      1136889999999999888532  1234  4566643

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.86  E-value=2.6e-19  Score=154.96  Aligned_cols=220  Identities=13%  Similarity=0.107  Sum_probs=150.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+.+++++|||||+|.||.+++++|+++|++|+++.|+..+............++.++.+|+++.+++.++++       
T Consensus         6 ~~~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   78 (353)
T PLN02896          6 RESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-------   78 (353)
T ss_pred             cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-------
Confidence            3456889999999999999999999999999888887654433222222122468899999999988887764       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHH--HHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAF--DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--------  160 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~--~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--------  160 (264)
                      ++|+|||+|+...... .....+++.+  ...++.|+.+++++++++.+..   + .+++|++||.......        
T Consensus        79 ~~d~Vih~A~~~~~~~-~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~---~-~~~~v~~SS~~vyg~~~~~~~~~~  153 (353)
T PLN02896         79 GCDGVFHVAASMEFDV-SSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSK---T-VKRVVFTSSISTLTAKDSNGRWRA  153 (353)
T ss_pred             CCCEEEECCccccCCc-cccccchhhhhhHHhHHHHHHHHHHHHHHHHhcC---C-ccEEEEEechhhccccccCCCCCC
Confidence            5899999999764321 1122233333  4567888899999999876532   2 3589999997554210        


Q ss_pred             -----------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC
Q 041914          161 -----------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT  223 (264)
Q Consensus       161 -----------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~  223 (264)
                                       ++...|+.||.+.+.+++.++.++   ++++..+.|+.+.+|................+....
T Consensus       154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~  230 (353)
T PLN02896        154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKEN---GIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDS  230 (353)
T ss_pred             ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHc---CCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCc
Confidence                             122379999999999998887664   799999999999888543211111111111111110


Q ss_pred             ---C---------CCCCCCChHHHHHHHHHHhCC
Q 041914          224 ---P---------LEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       224 ---~---------~~~~~~~~edva~~~~~l~s~  245 (264)
                         +         ..+.++.++|++++++.++..
T Consensus       231 ~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~  264 (353)
T PLN02896        231 KLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ  264 (353)
T ss_pred             cccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence               0         012578999999999998853

>PLN02650 dihydroflavonol-4-reductase

Probab=99.85  E-value=3.5e-19  Score=154.06  Aligned_cols=210  Identities=14%  Similarity=0.128  Sum_probs=147.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+|++|||||+|.||.+++++|+++|++|+++.|+...... ......    ..++.++.+|++|.+.+.++++      
T Consensus         4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~------   76 (351)
T PLN02650          4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKK-VKHLLDLPGATTRLTLWKADLAVEGSFDDAIR------   76 (351)
T ss_pred             CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH-HHHHHhccCCCCceEEEEecCCChhhHHHHHh------
Confidence            46899999999999999999999999998888876544322 111111    1257889999999988887765      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG---------  160 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~---------  160 (264)
                       .+|++||+|+.....     ..  +.+++.+++|+.+++++++++.+..   . .++||++||.....+.         
T Consensus        77 -~~d~ViH~A~~~~~~-----~~--~~~~~~~~~Nv~gt~~ll~aa~~~~---~-~~r~v~~SS~~~~~~~~~~~~~~~E  144 (351)
T PLN02650         77 -GCTGVFHVATPMDFE-----SK--DPENEVIKPTVNGMLSIMKACAKAK---T-VRRIVFTSSAGTVNVEEHQKPVYDE  144 (351)
T ss_pred             -CCCEEEEeCCCCCCC-----CC--CchhhhhhHHHHHHHHHHHHHHhcC---C-ceEEEEecchhhcccCCCCCCccCc
Confidence             589999999864211     11  2246788999999999999986532   1 3589999997532110         


Q ss_pred             -------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC-----
Q 041914          161 -------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ-----  222 (264)
Q Consensus       161 -------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-----  222 (264)
                                   .+...|+.||.+.+.+++.++.+   +|++++.+.|+.+.+|..........-.........     
T Consensus       145 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~  221 (351)
T PLN02650        145 DCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAE---NGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYS  221 (351)
T ss_pred             ccCCchhhhhccccccchHHHHHHHHHHHHHHHHHH---cCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccC
Confidence                         01247999999999999988776   489999999999999864322111110000101111     


Q ss_pred             CCCCCCCCChHHHHHHHHHHhCC
Q 041914          223 TPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       223 ~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ....+.++.++|++++++.++..
T Consensus       222 ~~~~r~~v~V~Dva~a~~~~l~~  244 (351)
T PLN02650        222 IIKQGQFVHLDDLCNAHIFLFEH  244 (351)
T ss_pred             cCCCcceeeHHHHHHHHHHHhcC
Confidence            01125789999999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.84  E-value=9e-19  Score=150.72  Aligned_cols=212  Identities=16%  Similarity=0.148  Sum_probs=146.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHH-hhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA-TSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +.++++|||||+|.||++++++|+++|++|+++.|.......... .... ..++.++.+|++|.+++.++++       
T Consensus         7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   79 (338)
T PLN00198          7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-------   79 (338)
T ss_pred             CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-------
Confidence            457999999999999999999999999998877776543321110 1111 1357889999999988877665       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------  159 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------  159 (264)
                      ++|++||+|+....     .  ..+.+...+++|+.++.++++++.+.   .+ .+++|++||......           
T Consensus        80 ~~d~vih~A~~~~~-----~--~~~~~~~~~~~nv~g~~~ll~a~~~~---~~-~~~~v~~SS~~~~g~~~~~~~~~~~~  148 (338)
T PLN00198         80 GCDLVFHVATPVNF-----A--SEDPENDMIKPAIQGVHNVLKACAKA---KS-VKRVILTSSAAAVSINKLSGTGLVMN  148 (338)
T ss_pred             cCCEEEEeCCCCcc-----C--CCChHHHHHHHHHHHHHHHHHHHHhc---CC-ccEEEEeecceeeeccCCCCCCceec
Confidence            68999999985321     1  11234567899999999999998552   12 469999999764421           


Q ss_pred             -------------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC-----
Q 041914          160 -------------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP-----  221 (264)
Q Consensus       160 -------------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-----  221 (264)
                                   .++...|+.||.+.+.+++.++.+   .|+.+..+.|+.+.+|...................     
T Consensus       149 E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~  225 (338)
T PLN00198        149 EKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLI  225 (338)
T ss_pred             cccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHh---cCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCcccc
Confidence                         124567999999999999888766   47999999999998885321111101001111100     


Q ss_pred             ----CCC---CCCCCCChHHHHHHHHHHhCC
Q 041914          222 ----QTP---LEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       222 ----~~~---~~~~~~~~edva~~~~~l~s~  245 (264)
                          ..+   ....++.++|++++++.++..
T Consensus       226 ~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~  256 (338)
T PLN00198        226 NGLKGMQMLSGSISITHVEDVCRAHIFLAEK  256 (338)
T ss_pred             ccccccccccCCcceeEHHHHHHHHHHHhhC
Confidence                001   113688999999999998864

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.84  E-value=1e-18  Score=145.05  Aligned_cols=225  Identities=16%  Similarity=0.150  Sum_probs=162.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH--HHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+++|+||||+|.||.+++++|.++|++|....|++++...  .+.+.... .+.+.+..|++|+++++++++       
T Consensus         5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-------   77 (327)
T KOG1502|consen    5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-------   77 (327)
T ss_pred             CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-------
Confidence            68999999999999999999999999999999999887433  23333222 468999999999999999998       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-CC-------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-KR-------  162 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-~~-------  162 (264)
                      +.|+|+|.|......   .  .+  .-.++++..+.|+.+.++++..    ...-.|||++||..+.... +.       
T Consensus        78 gcdgVfH~Asp~~~~---~--~~--~e~~li~pav~Gt~nVL~ac~~----~~sVkrvV~TSS~aAv~~~~~~~~~~~vv  146 (327)
T KOG1502|consen   78 GCDGVFHTASPVDFD---L--ED--PEKELIDPAVKGTKNVLEACKK----TKSVKRVVYTSSTAAVRYNGPNIGENSVV  146 (327)
T ss_pred             CCCEEEEeCccCCCC---C--CC--cHHhhhhHHHHHHHHHHHHHhc----cCCcceEEEeccHHHhccCCcCCCCCccc
Confidence            789999999876543   1  11  3347999999999999998843    2224699999999988643 11       


Q ss_pred             ----C----------chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC----C
Q 041914          163 ----R----------TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT----P  224 (264)
Q Consensus       163 ----~----------~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~----~  224 (264)
                          |          .-|+.||.--+.-+..++.|   .++.+.+|+|+.|-.|........+.......+....    .
T Consensus       147 dE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e---~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n  223 (327)
T KOG1502|consen  147 DEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKE---NGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPN  223 (327)
T ss_pred             ccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHh---CCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCC
Confidence                1          13677776555555444444   3699999999999999876643333333334433321    1


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ....++.++|||.+.++++.  ...-.|++|-.....
T Consensus       224 ~~~~~VdVrDVA~AHv~a~E--~~~a~GRyic~~~~~  258 (327)
T KOG1502|consen  224 FWLAFVDVRDVALAHVLALE--KPSAKGRYICVGEVV  258 (327)
T ss_pred             CceeeEeHHHHHHHHHHHHc--CcccCceEEEecCcc
Confidence            21236789999999999984  444558877766544

>PRK06720 hypothetical protein; Provisional

Probab=99.84  E-value=2.8e-19  Score=138.15  Aligned_cols=144  Identities=24%  Similarity=0.331  Sum_probs=113.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|+++||||++|||+++++.|+++|++|+++.++.+...+...+... ..+..++++|+++.+++.++++++.+.+
T Consensus        12 ~~l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~   91 (169)
T PRK06720         12 MKLAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAF   91 (169)
T ss_pred             cccCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            458899999999999999999999999999988888765543322222221 2357788999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC------CCcEEEEecCCCCCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG------VRGSIVCTASVAGSC  158 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~------~~~~iv~iss~~~~~  158 (264)
                      |++|++|||||+.... .++.+.+.++ ++  ..|+.+++..++.+.+.|.+++      ..|++..||+....+
T Consensus        92 G~iDilVnnAG~~~~~-~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (169)
T PRK06720         92 SRIDMLFQNAGLYKID-SIFSRQQEND-SN--VLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQSF  162 (169)
T ss_pred             CCCCEEEECCCcCCCC-CcccccchhH-hh--ceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccccc
Confidence            9999999999987644 3555556555 34  7777778889999999988754      257888888876654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.83  E-value=2.7e-19  Score=154.28  Aligned_cols=225  Identities=14%  Similarity=0.088  Sum_probs=145.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh----hHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDE----LGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |++|||||+|+||.+++++|+++|++|+++.|+...    ..+.+.+...   ...+.++.+|++|.+++.++++..   
T Consensus         1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~---   77 (343)
T TIGR01472         1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEI---   77 (343)
T ss_pred             CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhC---
Confidence            689999999999999999999999999888887542    1111111110   135789999999999998888854   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                        ++|++||+|+.....      ...+.-...+++|+.++.++++++.+.-.+ . ..++|++||.....          
T Consensus        78 --~~d~ViH~Aa~~~~~------~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~-~-~~~~v~~SS~~vyg~~~~~~~~E~  147 (343)
T TIGR01472        78 --KPTEIYNLAAQSHVK------VSFEIPEYTADVDGIGTLRLLEAVRTLGLI-K-SVKFYQASTSELYGKVQEIPQNET  147 (343)
T ss_pred             --CCCEEEECCcccccc------hhhhChHHHHHHHHHHHHHHHHHHHHhCCC-c-CeeEEEeccHHhhCCCCCCCCCCC
Confidence              589999999975432      112233567789999999999998763111 1 24799999964331          


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcC---CceEEEeeCCcccCcccccccCCChHHHH-hhcC--------CCCCC
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVH---GIRVNCVSPHGLATPLTCHAYGMPADEVE-KLFE--------PQTPL  225 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~---~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~~--------~~~~~  225 (264)
                       +..+...|+.||.+.+.+++.++.++.-.   ++..|...|+.-..-..     ....... ....        .....
T Consensus       148 ~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~g~~  222 (343)
T TIGR01472       148 TPFYPRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVT-----RKITRAAAKIKLGLQEKLYLGNLDA  222 (343)
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccc-----hHHHHHHHHHHcCCCCceeeCCCcc
Confidence             22356789999999999999998875321   12223344442111000     0001111 1000        11111


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ...++.++|++++++.++....    +..+++.+|..
T Consensus       223 ~rd~i~V~D~a~a~~~~~~~~~----~~~yni~~g~~  255 (343)
T TIGR01472       223 KRDWGHAKDYVEAMWLMLQQDK----PDDYVIATGET  255 (343)
T ss_pred             ccCceeHHHHHHHHHHHHhcCC----CccEEecCCCc
Confidence            2568899999999988875431    24688876643

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.83  E-value=1.1e-18  Score=149.08  Aligned_cols=211  Identities=20%  Similarity=0.230  Sum_probs=145.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH--HHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ--VATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++|++|||||+|.||++++++|.++|++|+++.|+.......  +..... ..++.++.+|++|++++..+++       
T Consensus         3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   75 (322)
T PLN02662          3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-------   75 (322)
T ss_pred             CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-------
Confidence            468999999999999999999999999988888765432211  111111 1367899999999988877765       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC--CCCC--------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG--SCGG--------  160 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~--~~~~--------  160 (264)
                      ++|++||+|+.....   ..  .  ...+.+++|+.++.++++++....   + ..++|++||..+  ..+.        
T Consensus        76 ~~d~Vih~A~~~~~~---~~--~--~~~~~~~~nv~gt~~ll~a~~~~~---~-~~~~v~~SS~~~~~y~~~~~~~~~~~  144 (322)
T PLN02662         76 GCEGVFHTASPFYHD---VT--D--PQAELIDPAVKGTLNVLRSCAKVP---S-VKRVVVTSSMAAVAYNGKPLTPDVVV  144 (322)
T ss_pred             CCCEEEEeCCcccCC---CC--C--hHHHHHHHHHHHHHHHHHHHHhCC---C-CCEEEEccCHHHhcCCCcCCCCCCcC
Confidence            689999999865321   11  1  225788999999999999875421   2 458999999753  1110        


Q ss_pred             -------C-----CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC--CC-C
Q 041914          161 -------K-----RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ--TP-L  225 (264)
Q Consensus       161 -------~-----~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~-~  225 (264)
                             |     ....|+.+|.+.+.+++.+..+   .++++..+.|+.+.+|....................  .| .
T Consensus       145 ~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  221 (322)
T PLN02662        145 DETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKE---NGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNA  221 (322)
T ss_pred             CcccCCChhHhhcccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCC
Confidence                   1     0146999999999988877655   479999999999999864322111112222222111  11 2


Q ss_pred             CCCCCChHHHHHHHHHHhCC
Q 041914          226 EGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~  245 (264)
                      ...++.++|+|++++.++..
T Consensus       222 ~~~~i~v~Dva~a~~~~~~~  241 (322)
T PLN02662        222 SYRWVDVRDVANAHIQAFEI  241 (322)
T ss_pred             CcCeEEHHHHHHHHHHHhcC
Confidence            24588999999999998864

>PLN02583 cinnamoyl-CoA reductase

Probab=99.83  E-value=1.8e-18  Score=146.15  Aligned_cols=220  Identities=10%  Similarity=0.013  Sum_probs=148.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh--HHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +=.+|++|||||+|+||++++++|+++|++|+++.|+..+.  .+.+..... ..++.++.+|++|.+++.+++.     
T Consensus         3 ~~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-----   77 (297)
T PLN02583          3 DESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-----   77 (297)
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----
Confidence            34578999999999999999999999999998888854321  112222111 2357889999999988876654     


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---C----
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG---K----  161 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~---~----  161 (264)
                        ..|.++|.++....       .+ .++++.+++|+.+++++++++.+.+   + .++||++||..+....   +    
T Consensus        78 --~~d~v~~~~~~~~~-------~~-~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~riV~~SS~~a~~~~~~~~~~~~  143 (297)
T PLN02583         78 --GCSGLFCCFDPPSD-------YP-SYDEKMVDVEVRAAHNVLEACAQTD---T-IEKVVFTSSLTAVIWRDDNISTQK  143 (297)
T ss_pred             --CCCEEEEeCccCCc-------cc-ccHHHHHHHHHHHHHHHHHHHHhcC---C-ccEEEEecchHheecccccCCCCC
Confidence              68999987653221       11 2467899999999999999987653   2 3699999998654211   0    


Q ss_pred             -----CC----------chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCC
Q 041914          162 -----RR----------TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE  226 (264)
Q Consensus       162 -----~~----------~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  226 (264)
                           .+          ..|+.||...+.+++.++.+   .|+++++|+|+.+.+|......    ..............
T Consensus       144 ~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~---~gi~~v~lrp~~v~Gp~~~~~~----~~~~~~~~~~~~~~  216 (297)
T PLN02583        144 DVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMD---RGVNMVSINAGLLMGPSLTQHN----PYLKGAAQMYENGV  216 (297)
T ss_pred             CCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHH---hCCcEEEEcCCcccCCCCCCch----hhhcCCcccCcccC
Confidence                 01          15899999999888877655   3899999999999988543210    00000000000111


Q ss_pred             CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       227 ~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ..++.++|+|++++..+...  ...| .+.+-++
T Consensus       217 ~~~v~V~Dva~a~~~al~~~--~~~~-r~~~~~~  247 (297)
T PLN02583        217 LVTVDVNFLVDAHIRAFEDV--SSYG-RYLCFNH  247 (297)
T ss_pred             cceEEHHHHHHHHHHHhcCc--ccCC-cEEEecC
Confidence            24789999999999988532  2334 4555444

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.83  E-value=4.4e-19  Score=153.18  Aligned_cols=232  Identities=13%  Similarity=0.032  Sum_probs=158.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh------CCCcEEEEEecCCCHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI------GVGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      +-.+++|++|||||+|.||.+++++|.++|++|+++.+.............      ...++.++.+|+.|.+.+..+++
T Consensus        10 ~~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~   89 (348)
T PRK15181         10 KLVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK   89 (348)
T ss_pred             cccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh
Confidence            445788999999999999999999999999998888875443222111111      11357889999999888777765


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----  159 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----  159 (264)
                             .+|++||.|+.....      ...++....+++|+.++.++++++.    +.+ ..++|++||......    
T Consensus        90 -------~~d~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~----~~~-~~~~v~~SS~~vyg~~~~~  151 (348)
T PRK15181         90 -------NVDYVLHQAALGSVP------RSLKDPIATNSANIDGFLNMLTAAR----DAH-VSSFTYAASSSTYGDHPDL  151 (348)
T ss_pred             -------CCCEEEECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEeechHhhCCCCCC
Confidence                   589999999975432      1222345679999999999998874    333 458999998754321    


Q ss_pred             -------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHH-hhcCCC-C-----
Q 041914          160 -------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVE-KLFEPQ-T-----  223 (264)
Q Consensus       160 -------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~-~~~~~~-~-----  223 (264)
                             ..+...|+.+|.+.+.+++.++.+   .++++..+.|+.+..|......  ....+... ...... .     
T Consensus       152 ~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~  228 (348)
T PRK15181        152 PKIEERIGRPLSPYAVTKYVNELYADVFARS---YEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGD  228 (348)
T ss_pred             CCCCCCCCCCCChhhHHHHHHHHHHHHHHHH---hCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCC
Confidence                   124567999999999998887665   3799999999999887532110  01112222 111111 1     


Q ss_pred             -CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          224 -PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       224 -~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                       ...+.++.++|++++++.++........|+.+++.+|..
T Consensus       229 g~~~rd~i~v~D~a~a~~~~~~~~~~~~~~~~yni~~g~~  268 (348)
T PRK15181        229 GSTSRDFCYIENVIQANLLSATTNDLASKNKVYNVAVGDR  268 (348)
T ss_pred             CCceEeeEEHHHHHHHHHHHHhcccccCCCCEEEecCCCc
Confidence             111357889999999887664322234678899987654

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.83  E-value=1.2e-18  Score=148.25  Aligned_cols=223  Identities=17%  Similarity=0.097  Sum_probs=152.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           17 VAIITGGASGIGETTARLFADHG--ARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++|||||+|+||.+++++|.+.|  ++|+++.+.... ..+.+........+.++.+|++|++++.++++..     ++|
T Consensus         1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~-----~~d   75 (317)
T TIGR01181         1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEH-----QPD   75 (317)
T ss_pred             CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhc-----CCC
Confidence            48999999999999999999987  677766653221 1112222212235778999999999998888743     589


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------CCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------GGK  161 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------~~~  161 (264)
                      +|||+|+.....      .+.+.++..+++|+.++..+++.+...+.    ..++|++||.....            +..
T Consensus        76 ~vi~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~----~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~  145 (317)
T TIGR01181        76 AVVHFAAESHVD------RSISGPAAFIETNVVGTYTLLEAVRKYWH----EFRFHHISTDEVYGDLEKGDAFTETTPLA  145 (317)
T ss_pred             EEEEcccccCch------hhhhCHHHHHHHHHHHHHHHHHHHHhcCC----CceEEEeeccceeCCCCCCCCcCCCCCCC
Confidence            999999875422      23456778899999999999988755332    34899999854321            122


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC--CCC------CCCCCChH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ--TPL------EGVVLRAG  233 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~------~~~~~~~e  233 (264)
                      +...|+.+|.+.+.+++.++.++   ++++..+.|+.+..+.....  .............  .+.      ...++.++
T Consensus       146 ~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~R~~~i~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~  220 (317)
T TIGR01181       146 PSSPYSASKAASDHLVRAYHRTY---GLPALITRCSNNYGPYQFPE--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVE  220 (317)
T ss_pred             CCCchHHHHHHHHHHHHHHHHHh---CCCeEEEEeccccCCCCCcc--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHH
Confidence            45579999999999999987764   78999999998887643211  1111211111111  110      12467899


Q ss_pred             HHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          234 HVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       234 dva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |+++++..++.+.   ..|+.+++.+|..
T Consensus       221 D~a~~~~~~~~~~---~~~~~~~~~~~~~  246 (317)
T TIGR01181       221 DHCRAIYLVLEKG---RVGETYNIGGGNE  246 (317)
T ss_pred             HHHHHHHHHHcCC---CCCceEEeCCCCc
Confidence            9999999988542   3578888877643

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.82  E-value=2.6e-18  Score=148.67  Aligned_cols=226  Identities=14%  Similarity=0.071  Sum_probs=151.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEE-ecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVI-ADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|+||.+++++|.++|..+++. .+... .............++.++.+|++|.+++.+++++.     ++|+
T Consensus         2 kilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (352)
T PRK10084          2 KILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQH-----QPDA   76 (352)
T ss_pred             eEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhc-----CCCE
Confidence            58999999999999999999999874443 33221 11122221111235778999999999998888752     6999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC----CCCcEEEEecCCCCCC------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG----GVRGSIVCTASVAGSC------------  158 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~----~~~~~iv~iss~~~~~------------  158 (264)
                      +||+|+.....      .+.+..++.+++|+.++.++++++.++|+..    +...++|++||.....            
T Consensus        77 vih~A~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (352)
T PRK10084         77 VMHLAAESHVD------RSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE  150 (352)
T ss_pred             EEECCcccCCc------chhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc
Confidence            99999875321      1122457789999999999999998876431    1124899999964332            


Q ss_pred             ---------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHH-HhhcCC-C-----
Q 041914          159 ---------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV-EKLFEP-Q-----  222 (264)
Q Consensus       159 ---------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-~~~~~~-~-----  222 (264)
                               +..+...|+.+|.+.+.+++.++.++   ++++..+.|+.+..|..... . ..... ...... .     
T Consensus       151 ~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~~~~~-~-~~~~~~~~~~~~~~~~~~~  225 (352)
T PRK10084        151 ELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPYHFPE-K-LIPLVILNALEGKPLPIYG  225 (352)
T ss_pred             cCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeccceeCCCcCcc-c-hHHHHHHHHhcCCCeEEeC
Confidence                     12345789999999999999988775   56777778877776642110 0 11111 111111 1     


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          223 -TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       223 -~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                       ......++.++|+++++..++...   ..|+.+++.+|.
T Consensus       226 ~g~~~~~~v~v~D~a~a~~~~l~~~---~~~~~yni~~~~  262 (352)
T PRK10084        226 KGDQIRDWLYVEDHARALYKVVTEG---KAGETYNIGGHN  262 (352)
T ss_pred             CCCeEEeeEEHHHHHHHHHHHHhcC---CCCceEEeCCCC
Confidence             111244789999999998887532   347788887764

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.82  E-value=2.5e-18  Score=138.91  Aligned_cols=223  Identities=15%  Similarity=0.100  Sum_probs=160.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc--EEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR--MIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~--v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +++|||||+|.||.++++.+.++.-.  |+.+..-.-. ..+.++......+..+++.|+.|.+.+.+++++-     ++
T Consensus         1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~~-----~~   75 (340)
T COG1088           1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKEY-----QP   75 (340)
T ss_pred             CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHhc-----CC
Confidence            46899999999999999999998654  3444332221 2233444445568999999999999999888754     79


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-------------CC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-------------CG  159 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-------------~~  159 (264)
                      |+++|.|+-....      -+...-+..+++|+.|++.++++++.+..+    -++++||.-...             .|
T Consensus        76 D~VvhfAAESHVD------RSI~~P~~Fi~TNv~GT~~LLEaar~~~~~----frf~HISTDEVYG~l~~~~~~FtE~tp  145 (340)
T COG1088          76 DAVVHFAAESHVD------RSIDGPAPFIQTNVVGTYTLLEAARKYWGK----FRFHHISTDEVYGDLGLDDDAFTETTP  145 (340)
T ss_pred             CeEEEechhcccc------ccccChhhhhhcchHHHHHHHHHHHHhccc----ceEEEeccccccccccCCCCCcccCCC
Confidence            9999999976643      344466778999999999999999876642    489999876643             24


Q ss_pred             CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHH-HHhh-cCCCCC------CCCCCCC
Q 041914          160 GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE-VEKL-FEPQTP------LEGVVLR  231 (264)
Q Consensus       160 ~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~-~~~~~~------~~~~~~~  231 (264)
                      ..+.++|++|||+-++|+|++...|   |+.+....+..-..|-.-..  +..+. .... .....|      ..+..+.
T Consensus       146 ~~PsSPYSASKAasD~lVray~~TY---glp~~ItrcSNNYGPyqfpE--KlIP~~I~nal~g~~lpvYGdG~~iRDWl~  220 (340)
T COG1088         146 YNPSSPYSASKAASDLLVRAYVRTY---GLPATITRCSNNYGPYQFPE--KLIPLMIINALLGKPLPVYGDGLQIRDWLY  220 (340)
T ss_pred             CCCCCCcchhhhhHHHHHHHHHHHc---CCceEEecCCCCcCCCcCch--hhhHHHHHHHHcCCCCceecCCcceeeeEE
Confidence            5678999999999999999999986   78888777765555532211  11111 1111 222222      2255788


Q ss_pred             hHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          232 AGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       232 ~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +||-+.++..++.+.   --|+++++.||-
T Consensus       221 VeDh~~ai~~Vl~kg---~~GE~YNIgg~~  247 (340)
T COG1088         221 VEDHCRAIDLVLTKG---KIGETYNIGGGN  247 (340)
T ss_pred             eHhHHHHHHHHHhcC---cCCceEEeCCCc
Confidence            899999999998643   239999999874

>PLN02240 UDP-glucose 4-epimerase

Probab=99.82  E-value=4.7e-18  Score=147.01  Aligned_cols=233  Identities=14%  Similarity=0.114  Sum_probs=151.8

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH---HHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG---RQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.+|++|||||+|+||.+++++|+++|++|+++.+......   ........  ..++.++.+|++|++++..++++.  
T Consensus         3 ~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~--   80 (352)
T PLN02240          3 LMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAST--   80 (352)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhC--
Confidence            56799999999999999999999999999888876433221   12222211  135788999999999998887643  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------  158 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------  158 (264)
                         ++|++||+|+.....      .+.+++.+.+++|+.++.++++++    .+.+ .+++|++||.....         
T Consensus        81 ---~~d~vih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~vyg~~~~~~~~E  146 (352)
T PLN02240         81 ---RFDAVIHFAGLKAVG------ESVAKPLLYYDNNLVGTINLLEVM----AKHG-CKKLVFSSSATVYGQPEEVPCTE  146 (352)
T ss_pred             ---CCCEEEEccccCCcc------ccccCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEEccHHHhCCCCCCCCCC
Confidence               799999999975322      123467789999999999988865    3333 46899999964321         


Q ss_pred             --CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--------CCChHHHHhhcCCCC-----
Q 041914          159 --GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--------GMPADEVEKLFEPQT-----  223 (264)
Q Consensus       159 --~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~-----  223 (264)
                        +..+...|+.+|.+.+.+++.++.+.  .++.+..+.|+.+..+......        ...............     
T Consensus       147 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (352)
T PLN02240        147 EFPLSATNPYGRTKLFIEEICRDIHASD--PEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTV  224 (352)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEE
Confidence              12346789999999999999887552  3566777776544332100000        000011111111100     


Q ss_pred             ----------CCCCCCCChHHHHHHHHHHhCCC--CCCeeccEEEecCeeec
Q 041914          224 ----------PLEGVVLRAGHVADAVLFLACRD--SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       224 ----------~~~~~~~~~edva~~~~~l~s~~--~~~~~G~~i~~dgG~~~  263 (264)
                                .....++.++|++++++.++...  .....|+.+++.+|..+
T Consensus       225 ~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~  276 (352)
T PLN02240        225 FGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGT  276 (352)
T ss_pred             eCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcE
Confidence                      01124678999999988776421  12345688998877543

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.80  E-value=2.4e-17  Score=141.84  Aligned_cols=228  Identities=14%  Similarity=0.163  Sum_probs=147.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHh--hhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT--SIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|+||.+++++|+++|++|+++.+..+........  .....++.++.+|++|.+++.++++.     .++|+
T Consensus         2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~~d~   76 (338)
T PRK10675          2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHD-----HAIDT   76 (338)
T ss_pred             eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhc-----CCCCE
Confidence            689999999999999999999999988876543322221111  11223567889999999988887763     26999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------------CCC
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------------GKR  162 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------------~~~  162 (264)
                      +||+|+.....  .    ..+...+.+++|+.++.++++++    ++.+ .+++|++||......            ..+
T Consensus        77 vvh~a~~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p  145 (338)
T PRK10675         77 VIHFAGLKAVG--E----SVQKPLEYYDNNVNGTLRLISAM----RAAN-VKNLIFSSSATVYGDQPKIPYVESFPTGTP  145 (338)
T ss_pred             EEECCcccccc--c----hhhCHHHHHHHHHHHHHHHHHHH----HHcC-CCEEEEeccHHhhCCCCCCccccccCCCCC
Confidence            99999875432  1    12335678899999999988765    4444 468999999754311            134


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-----C---hHHHHhhcCCC----------CC
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-----P---ADEVEKLFEPQ----------TP  224 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-----~---~~~~~~~~~~~----------~~  224 (264)
                      ...|+.+|.+.+.+++.++.+.  .++++..+.|+.+..+......+.     .   ...........          .|
T Consensus       146 ~~~Y~~sK~~~E~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (338)
T PRK10675        146 QSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYP  223 (338)
T ss_pred             CChhHHHHHHHHHHHHHHHHhc--CCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCC
Confidence            6789999999999999987654  256677777655544321111000     0   01111111110          01


Q ss_pred             --C---CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 --L---EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 --~---~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                        .   ...++.++|++++++.++........|+.+++.+|..
T Consensus       224 ~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~  266 (338)
T PRK10675        224 TEDGTGVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_pred             CCCCcEEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCc
Confidence              1   1347899999999888775322223468899987754

>PLN02686 cinnamoyl-CoA reductase

Probab=99.80  E-value=1.6e-17  Score=144.33  Aligned_cols=211  Identities=12%  Similarity=0.122  Sum_probs=143.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-------CCcEEEEEecCCCHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-------VGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      ..+.++|++|||||+|+||.+++++|+++|++|+++.|+.+... .+.+...       ...+.++.+|++|.+++.+++
T Consensus        48 ~~~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~-~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i  126 (367)
T PLN02686         48 GADAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKE-KLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAF  126 (367)
T ss_pred             ccCCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhhhccccccCCceEEEEcCCCCHHHHHHHH
Confidence            44678999999999999999999999999999888777654332 2222110       124788999999999988887


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC--C---
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG--S---  157 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~--~---  157 (264)
                      +       .+|.+||.++......  ...    ......++|+.++.++++++...   .+ ..++|++||..+  +   
T Consensus       127 ~-------~~d~V~hlA~~~~~~~--~~~----~~~~~~~~nv~gt~~llea~~~~---~~-v~r~V~~SS~~~~vyg~~  189 (367)
T PLN02686        127 D-------GCAGVFHTSAFVDPAG--LSG----YTKSMAELEAKASENVIEACVRT---ES-VRKCVFTSSLLACVWRQN  189 (367)
T ss_pred             H-------hccEEEecCeeecccc--ccc----ccchhhhhhHHHHHHHHHHHHhc---CC-ccEEEEeccHHHhccccc
Confidence            6       4799999998764321  100    11344677888888888876421   13 458999999531  1   


Q ss_pred             --C--C--------------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhc
Q 041914          158 --C--G--------------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF  219 (264)
Q Consensus       158 --~--~--------------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~  219 (264)
                        .  +              ..+...|+.||.+.+.+++.++.+   +|+++++++|+.+.+|.......   .......
T Consensus       190 ~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~---~gl~~v~lRp~~vyGp~~~~~~~---~~~~~~~  263 (367)
T PLN02686        190 YPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARG---KGLKLATICPALVTGPGFFRRNS---TATIAYL  263 (367)
T ss_pred             CCCCCCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHh---cCceEEEEcCCceECCCCCCCCC---hhHHHHh
Confidence              0  0              112346999999999999888766   48999999999999985321110   0111111


Q ss_pred             CCCCC----CCCCCCChHHHHHHHHHHhC
Q 041914          220 EPQTP----LEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       220 ~~~~~----~~~~~~~~edva~~~~~l~s  244 (264)
                      ....+    ....++.++|++++++.++.
T Consensus       264 ~g~~~~~g~g~~~~v~V~Dva~A~~~al~  292 (367)
T PLN02686        264 KGAQEMLADGLLATADVERLAEAHVCVYE  292 (367)
T ss_pred             cCCCccCCCCCcCeEEHHHHHHHHHHHHh
Confidence            11111    11237889999999988875

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.78  E-value=3.7e-17  Score=143.12  Aligned_cols=226  Identities=17%  Similarity=0.169  Sum_probs=173.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ...++||++|||||+|-||.++|+++++.+.+.+++..+++...-.+..++.    ..++.++-+|+.|.+.+..++++.
T Consensus       245 ~~~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~  324 (588)
T COG1086         245 GAMLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGH  324 (588)
T ss_pred             HhHcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcC
Confidence            3357999999999999999999999999999888887777765555544443    268899999999999999999854


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                           ++|+++|.|+.-..+      +-+.+..+.+.+|+.|+.++.+++..    .+ -.++|.+|+--+.+|.   ..
T Consensus       325 -----kvd~VfHAAA~KHVP------l~E~nP~Eai~tNV~GT~nv~~aa~~----~~-V~~~V~iSTDKAV~Pt---Nv  385 (588)
T COG1086         325 -----KVDIVFHAAALKHVP------LVEYNPEEAIKTNVLGTENVAEAAIK----NG-VKKFVLISTDKAVNPT---NV  385 (588)
T ss_pred             -----CCceEEEhhhhccCc------chhcCHHHHHHHhhHhHHHHHHHHHH----hC-CCEEEEEecCcccCCc---hH
Confidence                 699999999975543      23346788999999999999999853    33 4589999998877665   56


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC-------CCCCCCChHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP-------LEGVVLRAGHVADA  238 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~edva~~  238 (264)
                      |+++|...+.++.+++.+.+..+-++.++.-|.|-...-     .-.+-+.++.....|       +.+.+++.+|.++.
T Consensus       386 mGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-----SViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~L  460 (588)
T COG1086         386 MGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-----SVIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQL  460 (588)
T ss_pred             hhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-----CCHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHH
Confidence            999999999999999988776567888888888765321     112333333332222       33557788999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeee
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++.-..   -.-.|++|.+|-|-.
T Consensus       461 VlqA~a---~~~gGeifvldMGep  481 (588)
T COG1086         461 VLQAGA---IAKGGEIFVLDMGEP  481 (588)
T ss_pred             HHHHHh---hcCCCcEEEEcCCCC
Confidence            888653   246799999998754

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.78  E-value=1.4e-17  Score=139.21  Aligned_cols=222  Identities=18%  Similarity=0.190  Sum_probs=153.1

Q ss_pred             EEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           19 IITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        19 lItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      |||||+|.||.+++++|.++|  .+|.++.+........  .....+...++.+|++|.+++.++++       +.|++|
T Consensus         1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~--~~~~~~~~~~~~~Di~d~~~l~~a~~-------g~d~V~   71 (280)
T PF01073_consen    1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLK--DLQKSGVKEYIQGDITDPESLEEALE-------GVDVVF   71 (280)
T ss_pred             CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccch--hhhcccceeEEEeccccHHHHHHHhc-------CCceEE
Confidence            699999999999999999999  6766666554432211  11111233489999999999999887       789999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------------
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------------  159 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------------  159 (264)
                      |+|+......       ....++++++|+.|+-++++++..    .+ -.++|++||.....+                 
T Consensus        72 H~Aa~~~~~~-------~~~~~~~~~vNV~GT~nvl~aa~~----~~-VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~  139 (280)
T PF01073_consen   72 HTAAPVPPWG-------DYPPEEYYKVNVDGTRNVLEAARK----AG-VKRLVYTSSISVVFDNYKGDPIINGDEDTPYP  139 (280)
T ss_pred             EeCccccccC-------cccHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEcCcceeEeccCCCCcccCCcCCccc
Confidence            9999765431       235788999999999999998853    34 569999999987543                 


Q ss_pred             CCCCchhhchHHHHHHHHHHHHH-HhCc-CCceEEEeeCCcccCcccccccCCChHHHHhh----cCCCCCCCCCCCChH
Q 041914          160 GKRRTDYHMSKHAVIGLVRSASV-QLGV-HGIRVNCVSPHGLATPLTCHAYGMPADEVEKL----FEPQTPLEGVVLRAG  233 (264)
Q Consensus       160 ~~~~~~y~~sK~al~~~~~~la~-e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~e  233 (264)
                      ......|+.||+..+.++..... ++.+ ..++..+|+|..|..|.-..............    ..........+.+++
T Consensus       140 ~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~  219 (280)
T PF01073_consen  140 SSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVE  219 (280)
T ss_pred             ccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHH
Confidence            11445799999999999877654 1221 24899999999998885433322221111111    001111113477899


Q ss_pred             HHHHHHHHHhC---CC--CCCeeccEEEecCee
Q 041914          234 HVADAVLFLAC---RD--SEFVTGHDLVVDGGF  261 (264)
Q Consensus       234 dva~~~~~l~s---~~--~~~~~G~~i~~dgG~  261 (264)
                      ++|++.+-.+.   +.  .....|+.|.++.|.
T Consensus       220 NvA~ahvlA~~~L~~~~~~~~~~G~~y~itd~~  252 (280)
T PF01073_consen  220 NVAHAHVLAAQALLEPGKPERVAGQAYFITDGE  252 (280)
T ss_pred             HHHHHHHHHHHHhccccccccCCCcEEEEECCC
Confidence            99998765432   22  467899999998764

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.77  E-value=4.3e-17  Score=139.26  Aligned_cols=228  Identities=16%  Similarity=0.129  Sum_probs=151.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||.+++++|.++|++|+++.+........+........+.++.+|+++.+++.++++.     +++|++|
T Consensus         1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~~d~vv   75 (328)
T TIGR01179         1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE-----HKIDAVI   75 (328)
T ss_pred             CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh-----CCCcEEE
Confidence            47999999999999999999999998776554332222222211112577889999999999888763     3799999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      ||+|.....      ...++..+.+..|+.++..+++.+.    +.+ ..++|++||......           ..+...
T Consensus        76 ~~ag~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~  144 (328)
T TIGR01179        76 HFAGLIAVG------ESVQDPLKYYRNNVVNTLNLLEAMQ----QTG-VKKFIFSSSAAVYGEPSSIPISEDSPLGPINP  144 (328)
T ss_pred             ECccccCcc------hhhcCchhhhhhhHHHHHHHHHHHH----hcC-CCEEEEecchhhcCCCCCCCccccCCCCCCCc
Confidence            999976432      1223456778999999999888753    333 468999988654321           124467


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-----C--ChHHHHhhcC---C-------CCC----
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-----M--PADEVEKLFE---P-------QTP----  224 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~--~~~~~~~~~~---~-------~~~----  224 (264)
                      |+.+|++.+.+++.++.+.  .++++..+.|+.+..+.......     .  ..........   .       ..|    
T Consensus       145 y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  222 (328)
T TIGR01179       145 YGRSKLMSERILRDLSKAD--PGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDG  222 (328)
T ss_pred             hHHHHHHHHHHHHHHHHhc--cCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCC
Confidence            9999999999999987652  47899999998777653211000     0  0111111110   0       001    


Q ss_pred             -CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 -LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 -~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                       ....++.++|++++++.++........|+.|++.+|..
T Consensus       223 ~~~~~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~  261 (328)
T TIGR01179       223 TCVRDYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQG  261 (328)
T ss_pred             ceEEeeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCc
Confidence             01246789999999998885322334578888877643

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=99.77  E-value=3.5e-17  Score=135.09  Aligned_cols=200  Identities=15%  Similarity=0.139  Sum_probs=129.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH-HHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE-CQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~~   91 (264)
                      ...+++|||||+|+||++++++|+++|++|+++.|+.+.......   ....+.++.+|++|. +++.+.+   .   .+
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~---~~~~~~~~~~Dl~d~~~~l~~~~---~---~~   85 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP---QDPSLQIVRADVTEGSDKLVEAI---G---DD   85 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc---cCCceEEEEeeCCCCHHHHHHHh---h---cC
Confidence            567999999999999999999999999998888887654332211   123588899999983 3332222   0   27


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---CCCCCchhhc
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---GGKRRTDYHM  168 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---~~~~~~~y~~  168 (264)
                      +|++|+++|..... .+.         ..+++|+.++.++++++    .+.+ .++||++||.....   +.+....|..
T Consensus        86 ~d~vi~~~g~~~~~-~~~---------~~~~~n~~~~~~ll~a~----~~~~-~~~iV~iSS~~v~g~~~~~~~~~~~~~  150 (251)
T PLN00141         86 SDAVICATGFRRSF-DPF---------APWKVDNFGTVNLVEAC----RKAG-VTRFILVSSILVNGAAMGQILNPAYIF  150 (251)
T ss_pred             CCEEEECCCCCcCC-CCC---------CceeeehHHHHHHHHHH----HHcC-CCEEEEEccccccCCCcccccCcchhH
Confidence            99999999864321 111         12467888888888876    3444 57999999986432   2223344666


Q ss_pred             hHHHHHHH-HHHHHHH-hCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          169 SKHAVIGL-VRSASVQ-LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       169 sK~al~~~-~~~la~e-~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      .|.+...+ .+..+.+ +...|++++.|.||++.++........        .....+. ...++++|+|+.+..++..
T Consensus       151 ~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~~~~~~--------~~~~~~~-~~~i~~~dvA~~~~~~~~~  220 (251)
T PLN00141        151 LNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPTGNIVM--------EPEDTLY-EGSISRDQVAEVAVEALLC  220 (251)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCCceEEE--------CCCCccc-cCcccHHHHHHHHHHHhcC
Confidence            56544433 2333332 466799999999999987642211000        0001111 2357999999999999854

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.76  E-value=1.7e-16  Score=135.74  Aligned_cols=212  Identities=18%  Similarity=0.221  Sum_probs=148.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++++||||+|+||.++++.|+++|++|+++.|+..+.. .    .....+.++.+|++|.+++.++++       ++|++
T Consensus         1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~----~~~~~~~~~~~D~~~~~~l~~~~~-------~~d~v   68 (328)
T TIGR03466         1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR-N----LEGLDVEIVEGDLRDPASLRKAVA-------GCRAL   68 (328)
T ss_pred             CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccc-c----cccCCceEEEeeCCCHHHHHHHHh-------CCCEE
Confidence            36899999999999999999999999988888755421 1    111257889999999998887775       68999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC--------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK--------------  161 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~--------------  161 (264)
                      ||+++.....        .++++..+++|+.++.++++.+..    .+ .+++|++||.....+.+              
T Consensus        69 i~~a~~~~~~--------~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~  135 (328)
T TIGR03466        69 FHVAADYRLW--------APDPEEMYAANVEGTRNLLRAALE----AG-VERVVYTSSVATLGVRGDGTPADETTPSSLD  135 (328)
T ss_pred             EEeceecccC--------CCCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEechhhcCcCCCCCCcCccCCCCcc
Confidence            9999754211        123577899999999999888653    33 46999999976543210              


Q ss_pred             -CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC----CCCCCCChHHHH
Q 041914          162 -RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP----LEGVVLRAGHVA  236 (264)
Q Consensus       162 -~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~edva  236 (264)
                       ....|+.+|.+.+.+++.++.+   .++++..+.|+.+.++....... .............|    ....++.++|++
T Consensus       136 ~~~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~~~G~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a  211 (328)
T TIGR03466       136 DMIGHYKRSKFLAEQAALEMAAE---KGLPVVIVNPSTPIGPRDIKPTP-TGRIIVDFLNGKMPAYVDTGLNLVHVDDVA  211 (328)
T ss_pred             cccChHHHHHHHHHHHHHHHHHh---cCCCEEEEeCCccCCCCCCCCCc-HHHHHHHHHcCCCceeeCCCcceEEHHHHH
Confidence             1357999999999999988765   37899999999887764321100 01111111111111    113467899999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecC
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      ++++.++...   ..|+.+.++|
T Consensus       212 ~a~~~~~~~~---~~~~~~~~~~  231 (328)
T TIGR03466       212 EGHLLALERG---RIGERYILGG  231 (328)
T ss_pred             HHHHHHHhCC---CCCceEEecC
Confidence            9988887542   3577787754

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=99.76  E-value=8.3e-17  Score=131.23  Aligned_cols=215  Identities=18%  Similarity=0.239  Sum_probs=156.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      ||||||+|.||.+++++|.++|..|+.+.++..+........    ++.++.+|+.|.+.++++++..     .+|.+||
T Consensus         1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~dl~~~~~~~~~~~~~-----~~d~vi~   71 (236)
T PF01370_consen    1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL----NVEFVIGDLTDKEQLEKLLEKA-----NIDVVIH   71 (236)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT----TEEEEESETTSHHHHHHHHHHH-----TESEEEE
T ss_pred             EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc----eEEEEEeecccccccccccccc-----CceEEEE
Confidence            699999999999999999999999888888776654333222    6889999999999999999877     7999999


Q ss_pred             cCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-----------CCCchh
Q 041914           98 NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-----------KRRTDY  166 (264)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-----------~~~~~y  166 (264)
                      +|+.....      .+.+.....++.|+.++.++++.+.    +.+ ..++|++||.......           .+...|
T Consensus        72 ~a~~~~~~------~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y  140 (236)
T PF01370_consen   72 LAAFSSNP------ESFEDPEEIIEANVQGTRNLLEAAR----EAG-VKRFIFLSSASVYGDPDGEPIDEDSPINPLSPY  140 (236)
T ss_dssp             EBSSSSHH------HHHHSHHHHHHHHHHHHHHHHHHHH----HHT-TSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHH
T ss_pred             eecccccc------ccccccccccccccccccccccccc----ccc-ccccccccccccccccccccccccccccccccc
Confidence            99875311      2235667888889888888777764    434 3699999997543222           245679


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcc-cccccCCChHHHHhhc-CCC-------CCCCCCCCChHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMPADEVEKLF-EPQ-------TPLEGVVLRAGHVAD  237 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~-~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~edva~  237 (264)
                      +.+|...+.+.+.+..+.   ++++..+.|+.+..+. ...........+.... ..+       ......++.++|+++
T Consensus       141 ~~~K~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~  217 (236)
T PF01370_consen  141 GASKRAAEELLRDYAKKY---GLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAE  217 (236)
T ss_dssp             HHHHHHHHHHHHHHHHHH---TSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHH
T ss_pred             cccccccccccccccccc---ccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHH
Confidence            999999999999988775   8999999999998887 1111111112222222 211       111144778999999


Q ss_pred             HHHHHhCCCCCCeeccEEEe
Q 041914          238 AVLFLACRDSEFVTGHDLVV  257 (264)
Q Consensus       238 ~~~~l~s~~~~~~~G~~i~~  257 (264)
                      +++.++....  ..|+.+++
T Consensus       218 ~~~~~~~~~~--~~~~~yNi  235 (236)
T PF01370_consen  218 AIVAALENPK--AAGGIYNI  235 (236)
T ss_dssp             HHHHHHHHSC--TTTEEEEE
T ss_pred             HHHHHHhCCC--CCCCEEEe
Confidence            9999997554  67778876

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>PLN02427 UDP-apiose/xylose synthase

Probab=99.75  E-value=2.1e-16  Score=138.42  Aligned_cols=224  Identities=13%  Similarity=0.170  Sum_probs=147.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           13 LEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++.++||||||+|.||.+++++|.++ |++|+++.|....... +....   ...++.++.+|+.|.+.+.++++     
T Consensus        12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~-l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-----   85 (386)
T PLN02427         12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKH-LLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-----   85 (386)
T ss_pred             ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhh-hhccccccCCCCeEEEEcCCCChHHHHHHhh-----
Confidence            45678999999999999999999998 5888888766543322 11110   11358899999999988877765     


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--------  160 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--------  160 (264)
                        .+|+|||+|+.....  ... .   +-.+.+..|+.++.++++++.    +.+  .++|++||...+...        
T Consensus        86 --~~d~ViHlAa~~~~~--~~~-~---~~~~~~~~n~~gt~~ll~aa~----~~~--~r~v~~SS~~vYg~~~~~~~~e~  151 (386)
T PLN02427         86 --MADLTINLAAICTPA--DYN-T---RPLDTIYSNFIDALPVVKYCS----ENN--KRLIHFSTCEVYGKTIGSFLPKD  151 (386)
T ss_pred             --cCCEEEEcccccChh--hhh-h---ChHHHHHHHHHHHHHHHHHHH----hcC--CEEEEEeeeeeeCCCcCCCCCcc
Confidence              579999999975432  111 1   123445679999998888763    222  489999996432100        


Q ss_pred             -------------------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC------
Q 041914          161 -------------------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG------  209 (264)
Q Consensus       161 -------------------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------  209 (264)
                                               .+...|+.+|.+.+.+++.++..   .++.+..+.|+.+..+.......      
T Consensus       152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~  228 (386)
T PLN02427        152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAE---NGLEFTIVRPFNWIGPRMDFIPGIDGPSE  228 (386)
T ss_pred             cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhh---cCCceEEecccceeCCCCCcccccccccc
Confidence                                     01246999999999999876544   48999999999998875321000      


Q ss_pred             ---CChHHHHhhcCCCCC--------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          210 ---MPADEVEKLFEPQTP--------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       210 ---~~~~~~~~~~~~~~~--------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                         .....+........|        ....++.++|++++++.++... ....|+.+++.+|
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~-~~~~g~~yni~~~  289 (386)
T PLN02427        229 GVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENP-ARANGHIFNVGNP  289 (386)
T ss_pred             ccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCc-ccccCceEEeCCC
Confidence               000111111111111        1135789999999999887532 1245788998765

>TIGR01746 Thioester-redct thioester reductase domain

Probab=99.75  E-value=5.7e-16  Score=134.25  Aligned_cols=220  Identities=18%  Similarity=0.185  Sum_probs=145.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhh--HHHHHhhhC---------C-CcEEEEEecCCCHH------
Q 041914           17 VAIITGGASGIGETTARLFADHG--ARMIVIADIQDEL--GRQVATSIG---------V-GKCHYVHCDVTNEC------   76 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~--~~~~~~~~~---------~-~~~~~~~~D~s~~~------   76 (264)
                      ++|||||+|+||.+++++|+++|  ++|+++.|...+.  .+.+.+...         . .++.++.+|++++.      
T Consensus         1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~   80 (367)
T TIGR01746         1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA   80 (367)
T ss_pred             CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence            48999999999999999999999  6788888875522  111111110         0 36889999998652      


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ....+.       ..+|++||||+.....         ..+++.+++|+.++..+++.+..    .+ ..+++++||...
T Consensus        81 ~~~~~~-------~~~d~vih~a~~~~~~---------~~~~~~~~~nv~g~~~ll~~a~~----~~-~~~~v~iSS~~v  139 (367)
T TIGR01746        81 EWERLA-------ENVDTIVHNGALVNWV---------YPYSELRAANVLGTREVLRLAAS----GR-AKPLHYVSTISV  139 (367)
T ss_pred             HHHHHH-------hhCCEEEeCCcEeccC---------CcHHHHhhhhhHHHHHHHHHHhh----CC-CceEEEEccccc
Confidence            222222       3799999999975422         13567788999999988887643    33 346999999876


Q ss_pred             CCCC----------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh--
Q 041914          157 SCGG----------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL--  218 (264)
Q Consensus       157 ~~~~----------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--  218 (264)
                      ....                .....|+.+|.+.+.+++.++.    .|++++.+.||.+.++....... ..+.....  
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~-~~~~~~~~~~  214 (367)
T TIGR01746       140 LAAIDLSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASD----RGLPVTIVRPGRILGNSYTGAIN-SSDILWRMVK  214 (367)
T ss_pred             cCCcCCCCccccccccccccccCCChHHHHHHHHHHHHHHHh----cCCCEEEECCCceeecCCCCCCC-chhHHHHHHH
Confidence            5331                1235799999999998876543    38999999999998762211100 00111000  


Q ss_pred             --c-CCCCCC----CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          219 --F-EPQTPL----EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       219 --~-~~~~~~----~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                        . ....|.    ...++.++|++++++.++.......+|+.+++.++..
T Consensus       215 ~~~~~~~~p~~~~~~~~~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~  265 (367)
T TIGR01746       215 GCLALGAYPDSPELTEDLTPVDYVARAIVALSSQPAASAGGPVFHVVNPEP  265 (367)
T ss_pred             HHHHhCCCCCCCccccCcccHHHHHHHHHHHHhCCCcccCCceEEecCCCC
Confidence              0 011121    1237889999999999986554434588999988643

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=99.73  E-value=2.9e-16  Score=135.61  Aligned_cols=219  Identities=16%  Similarity=0.186  Sum_probs=146.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCC-CHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT-NECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~id   93 (264)
                      +++|||||+|.||.+++++|.++ |++|+.+.|+.....    .......+.++.+|++ +.+.+.++++       ++|
T Consensus         2 ~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dl~~~~~~~~~~~~-------~~d   70 (347)
T PRK11908          2 KKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLG----DLVNHPRMHFFEGDITINKEWIEYHVK-------KCD   70 (347)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHH----HhccCCCeEEEeCCCCCCHHHHHHHHc-------CCC
Confidence            47999999999999999999986 699888877543221    1222235888999998 6665555443       689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-------------  160 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-------------  160 (264)
                      ++||+|+...+.  .    ..++.+..+++|+.++.++++++.    +.+  .++|++||...+.+.             
T Consensus        71 ~ViH~aa~~~~~--~----~~~~p~~~~~~n~~~~~~ll~aa~----~~~--~~~v~~SS~~vyg~~~~~~~~ee~~~~~  138 (347)
T PRK11908         71 VILPLVAIATPA--T----YVKQPLRVFELDFEANLPIVRSAV----KYG--KHLVFPSTSEVYGMCPDEEFDPEASPLV  138 (347)
T ss_pred             EEEECcccCChH--H----hhcCcHHHHHHHHHHHHHHHHHHH----hcC--CeEEEEecceeeccCCCcCcCccccccc
Confidence            999999975432  1    112345778999999998888764    333  489999997433110             


Q ss_pred             -----CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----CC--ChHHHHhhcCCCCC-----
Q 041914          161 -----KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----GM--PADEVEKLFEPQTP-----  224 (264)
Q Consensus       161 -----~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~--~~~~~~~~~~~~~~-----  224 (264)
                           ++...|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+......    +.  ........+....+     
T Consensus       139 ~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  215 (347)
T PRK11908        139 YGPINKPRWIYACSKQLMDRVIWAYGME---EGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVD  215 (347)
T ss_pred             cCcCCCccchHHHHHHHHHHHHHHHHHH---cCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEec
Confidence                 12336999999999999888765   4788888999887776422110    00  01111111111111     


Q ss_pred             ---CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          225 ---LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       225 ---~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                         ..+.++.++|++++++.++........|+.+++.++
T Consensus       216 ~g~~~r~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~  254 (347)
T PRK11908        216 GGSQKRAFTDIDDGIDALMKIIENKDGVASGKIYNIGNP  254 (347)
T ss_pred             CCceeeccccHHHHHHHHHHHHhCccccCCCCeEEeCCC
Confidence               114589999999999998864332355889999774

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=99.73  E-value=2.3e-17  Score=135.81  Aligned_cols=218  Identities=17%  Similarity=0.172  Sum_probs=144.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh----CCCcE----EEEEecCCCHHHHHHHHHHHHHhc
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKC----HYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~~~~----~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ||||||+|-||.++|++|++.+..-+++.++++...-.+...+    ...++    .++.+|++|.+.+.+++++.    
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~----   76 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY----   76 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT------
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc----
Confidence            6999999999999999999999765555555554444444444    22223    45678999999999888755    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                       ++|+++|.|+.-..   ++-+.   ...+.+++|+.|+.++++++..    .+ -.++|++|+--+..|   ...|++|
T Consensus        77 -~pdiVfHaAA~KhV---pl~E~---~p~eav~tNv~GT~nv~~aa~~----~~-v~~~v~ISTDKAv~P---tnvmGat  141 (293)
T PF02719_consen   77 -KPDIVFHAAALKHV---PLMED---NPFEAVKTNVLGTQNVAEAAIE----HG-VERFVFISTDKAVNP---TNVMGAT  141 (293)
T ss_dssp             -T-SEEEE------H---HHHCC---CHHHHHHHHCHHHHHHHHHHHH----TT--SEEEEEEECGCSS-----SHHHHH
T ss_pred             -CCCEEEEChhcCCC---ChHHh---CHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEccccccCCC---CcHHHHH
Confidence             79999999997544   33332   4578899999999999999864    23 459999999887765   4789999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC-------CCCCCCChHHHHHHHHHH
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP-------LEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~edva~~~~~l  242 (264)
                      |...+.++...+......+.++.+|.-|.|-...     +.-.+-+.++.....|       +.+.+++++|.++.++.-
T Consensus       142 KrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~-----GSVip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a  216 (293)
T PF02719_consen  142 KRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR-----GSVIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQA  216 (293)
T ss_dssp             HHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT-----TSCHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC-----CcHHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHH
Confidence            9999999999998877777899999988876431     1223444554444433       335588999999999887


Q ss_pred             hCCCCCCeeccEEEecCeee
Q 041914          243 ACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +.-.   ..|+++.+|-|.-
T Consensus       217 ~~~~---~~geifvl~mg~~  233 (293)
T PF02719_consen  217 AALA---KGGEIFVLDMGEP  233 (293)
T ss_dssp             HHH-----TTEEEEE---TC
T ss_pred             HhhC---CCCcEEEecCCCC
Confidence            6422   3588999887754

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=99.72  E-value=4e-16  Score=136.45  Aligned_cols=218  Identities=11%  Similarity=0.107  Sum_probs=141.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH--HHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+++++|||||+|.||++++++|.++|++|+++.|+......  ...+.. ....+.++.+|++|++++.++++...   
T Consensus        58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~---  134 (390)
T PLN02657         58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG---  134 (390)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC---
Confidence            467899999999999999999999999999988887643211  001111 11357899999999999998887431   


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||++.....           ..+.+++|+.++.++++++    ++.+ .+++|++||.....   +...|..+
T Consensus       135 ~~~D~Vi~~aa~~~~~-----------~~~~~~vn~~~~~~ll~aa----~~~g-v~r~V~iSS~~v~~---p~~~~~~s  195 (390)
T PLN02657        135 DPVDVVVSCLASRTGG-----------VKDSWKIDYQATKNSLDAG----REVG-AKHFVLLSAICVQK---PLLEFQRA  195 (390)
T ss_pred             CCCcEEEECCccCCCC-----------CccchhhHHHHHHHHHHHH----HHcC-CCEEEEEeeccccC---cchHHHHH
Confidence            2699999998853211           1123567887777777765    3444 56899999987643   34568888


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |...+...+.     ...+++...+.|+.+..++...............+..........++.+|+|..++.++.+.  .
T Consensus       196 K~~~E~~l~~-----~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~--~  268 (390)
T PLN02657        196 KLKFEAELQA-----LDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDE--S  268 (390)
T ss_pred             HHHHHHHHHh-----ccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCc--c
Confidence            8888776543     23589999999987764322100000000000000100000012478899999998887432  2


Q ss_pred             eeccEEEecC
Q 041914          250 VTGHDLVVDG  259 (264)
Q Consensus       250 ~~G~~i~~dg  259 (264)
                      ..|+.+++.|
T Consensus       269 ~~~~~~~Igg  278 (390)
T PLN02657        269 KINKVLPIGG  278 (390)
T ss_pred             ccCCEEEcCC
Confidence            3578899976

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.72  E-value=1.2e-15  Score=142.61  Aligned_cols=227  Identities=15%  Similarity=0.100  Sum_probs=151.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADH--GARMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++|+||||||+|.||++++++|.++  +++|+.+.+... .....+.......++.++.+|++|.+.+..++..    
T Consensus         3 ~~~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~----   78 (668)
T PLN02260          3 TYEPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLIT----   78 (668)
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhh----
Confidence            457899999999999999999999998  677777765421 1111111111123688999999998877665432    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                       .++|+|||+|+.....      ....+..+.+++|+.++..+++++..    .+...++|++||...+.          
T Consensus        79 -~~~D~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~a~~~----~~~vkr~I~~SS~~vyg~~~~~~~~~~  147 (668)
T PLN02260         79 -EGIDTIMHFAAQTHVD------NSFGNSFEFTKNNIYGTHVLLEACKV----TGQIRRFIHVSTDEVYGETDEDADVGN  147 (668)
T ss_pred             -cCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHHh----cCCCcEEEEEcchHHhCCCccccccCc
Confidence             2799999999976432      11223456789999999999887642    22135899999975321          


Q ss_pred             ----CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC--CC------CC
Q 041914          159 ----GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ--TP------LE  226 (264)
Q Consensus       159 ----~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~------~~  226 (264)
                          +..+...|+.+|.+.+.+++.+..++   ++.+..+.|+.+..+....  ......+.......  .+      ..
T Consensus       148 ~E~~~~~p~~~Y~~sK~~aE~~v~~~~~~~---~l~~vilR~~~VyGp~~~~--~~~i~~~~~~a~~g~~i~i~g~g~~~  222 (668)
T PLN02260        148 HEASQLLPTNPYSATKAGAEMLVMAYGRSY---GLPVITTRGNNVYGPNQFP--EKLIPKFILLAMQGKPLPIHGDGSNV  222 (668)
T ss_pred             cccCCCCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECcccccCcCCCc--ccHHHHHHHHHhCCCCeEEecCCCce
Confidence                11245679999999999999887663   7889999999888764311  00111111111111  11      11


Q ss_pred             CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       227 ~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ..++.++|+++++..++...   ..|+.+++.++.
T Consensus       223 r~~ihV~Dva~a~~~~l~~~---~~~~vyni~~~~  254 (668)
T PLN02260        223 RSYLYCEDVAEAFEVVLHKG---EVGHVYNIGTKK  254 (668)
T ss_pred             EeeEEHHHHHHHHHHHHhcC---CCCCEEEECCCC
Confidence            34688999999999887432   346788887664

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=99.72  E-value=6.7e-16  Score=143.71  Aligned_cols=222  Identities=13%  Similarity=0.145  Sum_probs=150.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHH-HHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ-VKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~   90 (264)
                      +.+++||||||+|.||.+++++|.++ |++|+.+.|.......    .....++.++.+|++|.++ ++++++       
T Consensus       313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~----~~~~~~~~~~~gDl~d~~~~l~~~l~-------  381 (660)
T PRK08125        313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISR----FLGHPRFHFVEGDISIHSEWIEYHIK-------  381 (660)
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhh----hcCCCceEEEeccccCcHHHHHHHhc-------
Confidence            56889999999999999999999986 7998888876543221    1222357889999998654 343333       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------  159 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------  159 (264)
                      ++|++||+|+.....  .    ..++.++.+++|+.++.++++++..    .+  .++|++||...+..           
T Consensus       382 ~~D~ViHlAa~~~~~--~----~~~~~~~~~~~Nv~~t~~ll~a~~~----~~--~~~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T PRK08125        382 KCDVVLPLVAIATPI--E----YTRNPLRVFELDFEENLKIIRYCVK----YN--KRIIFPSTSEVYGMCTDKYFDEDTS  449 (660)
T ss_pred             CCCEEEECccccCch--h----hccCHHHHHHhhHHHHHHHHHHHHh----cC--CeEEEEcchhhcCCCCCCCcCcccc
Confidence            689999999976532  1    1123356789999999999988753    22  48999999643321           


Q ss_pred             ----C---CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC------CChHHHHhhcCCCCC--
Q 041914          160 ----G---KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG------MPADEVEKLFEPQTP--  224 (264)
Q Consensus       160 ----~---~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~~~~~~~~~~--  224 (264)
                          .   .+...|+.||.+.+.+++.++.++   ++++..+.|+.+..|.......      ..............+  
T Consensus       450 ~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~  526 (660)
T PRK08125        450 NLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE---GLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  526 (660)
T ss_pred             ccccCCCCCCccchHHHHHHHHHHHHHHHHhc---CCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeE
Confidence                0   123469999999999999887664   7899999999888774321100      011122111111111  


Q ss_pred             ------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          225 ------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       225 ------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                            ..+.++.++|++++++.++........|+.+++.+|
T Consensus       527 ~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~  568 (660)
T PRK08125        527 LVDGGKQKRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNP  568 (660)
T ss_pred             EeCCCceeeceeeHHHHHHHHHHHHhccccccCCeEEEcCCC
Confidence                  113478999999999888854333346888999876

>PLN02206 UDP-glucuronate decarboxylase

Probab=99.72  E-value=9.7e-16  Score=135.81  Aligned_cols=219  Identities=15%  Similarity=0.126  Sum_probs=143.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ..++++||||||+|.||++++++|.++|++|+++.+......+.........++.++..|+.+..     +       .+
T Consensus       116 ~~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----l-------~~  183 (442)
T PLN02206        116 KRKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----L-------LE  183 (442)
T ss_pred             ccCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----h-------cC
Confidence            34679999999999999999999999999988877643322222222222235778888987652     1       25


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-------------
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-------------  158 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-------------  158 (264)
                      +|+|||+|+...+.  . .   ..+..+.+++|+.++.++++++..    .+  .++|++||...+.             
T Consensus       184 ~D~ViHlAa~~~~~--~-~---~~~p~~~~~~Nv~gt~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~~~  251 (442)
T PLN02206        184 VDQIYHLACPASPV--H-Y---KFNPVKTIKTNVVGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLQHPQVETYWG  251 (442)
T ss_pred             CCEEEEeeeecchh--h-h---hcCHHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECChHHhCCCCCCCCCccccc
Confidence            89999999865432  1 1   113467899999999999988743    33  3899999986432             


Q ss_pred             ---CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHH-hhcCCC-CC------CCC
Q 041914          159 ---GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE-KLFEPQ-TP------LEG  227 (264)
Q Consensus       159 ---~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~~~~-~~------~~~  227 (264)
                         |..+...|+.+|.+.+.+++.+...   .++.+..+.|+.+..+............+. ...... .+      ..+
T Consensus       252 ~~~P~~~~s~Y~~SK~~aE~~~~~y~~~---~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~r  328 (442)
T PLN02206        252 NVNPIGVRSCYDEGKRTAETLTMDYHRG---ANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTR  328 (442)
T ss_pred             cCCCCCccchHHHHHHHHHHHHHHHHHH---hCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEE
Confidence               1122467999999999998877655   378888888887776642110001111111 111111 11      112


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      .++.++|++++++.++...   ..| .+++.+|.
T Consensus       329 dfi~V~Dva~ai~~a~e~~---~~g-~yNIgs~~  358 (442)
T PLN02206        329 SFQFVSDLVEGLMRLMEGE---HVG-PFNLGNPG  358 (442)
T ss_pred             eEEeHHHHHHHHHHHHhcC---CCc-eEEEcCCC
Confidence            4788999999999887432   234 78887664

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=99.71  E-value=9e-16  Score=130.40  Aligned_cols=215  Identities=19%  Similarity=0.213  Sum_probs=141.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH--hcCCccEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ--NYGQLDIM   95 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~id~l   95 (264)
                      +|||||+|.||++++++|+++|++++++.|+..+....         ..+..+|+.|..+.+.+++.+.+  .++++|+|
T Consensus         2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~V   72 (308)
T PRK11150          2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAI   72 (308)
T ss_pred             EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH---------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEE
Confidence            79999999999999999999999878777765432111         11245677776666666655542  33579999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~  164 (264)
                      ||+|+.....  .   .+.   +..++.|+.++.++++++.    +.+  .++|++||......           ..+..
T Consensus        73 ih~A~~~~~~--~---~~~---~~~~~~n~~~t~~ll~~~~----~~~--~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~  138 (308)
T PRK11150         73 FHEGACSSTT--E---WDG---KYMMDNNYQYSKELLHYCL----ERE--IPFLYASSAATYGGRTDDFIEEREYEKPLN  138 (308)
T ss_pred             EECceecCCc--C---CCh---HHHHHHHHHHHHHHHHHHH----HcC--CcEEEEcchHHhCcCCCCCCccCCCCCCCC
Confidence            9999864322  1   122   3568999999998888874    333  37999999754321           23456


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHHh-hcCCCCC--------CCCCCCChH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEK-LFEPQTP--------LEGVVLRAG  233 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~-~~~~~~~--------~~~~~~~~e  233 (264)
                      .|+.+|.+.+.+++.++.+   .++.+..+.|+.+..+.........  ...... ......+        ..+.++.++
T Consensus       139 ~Y~~sK~~~E~~~~~~~~~---~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~  215 (308)
T PRK11150        139 VYGYSKFLFDEYVRQILPE---ANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVG  215 (308)
T ss_pred             HHHHHHHHHHHHHHHHHHH---cCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHH
Confidence            7999999999998887655   3788999999888876432111110  011111 1111111        113578999


Q ss_pred             HHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          234 HVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       234 dva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |++++++.++...   . |..+++.+|..
T Consensus       216 D~a~a~~~~~~~~---~-~~~yni~~~~~  240 (308)
T PRK11150        216 DVAAVNLWFWENG---V-SGIFNCGTGRA  240 (308)
T ss_pred             HHHHHHHHHHhcC---C-CCeEEcCCCCc
Confidence            9999988877532   2 45888877653

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=99.69  E-value=2.9e-15  Score=130.37  Aligned_cols=220  Identities=14%  Similarity=0.077  Sum_probs=147.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +++++|||||+|.||++++++|.++|++|+.+.|........   .  .....++.+|+.|.+.+..+++       ++|
T Consensus        20 ~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~---~--~~~~~~~~~Dl~d~~~~~~~~~-------~~D   87 (370)
T PLN02695         20 EKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSE---D--MFCHEFHLVDLRVMENCLKVTK-------GVD   87 (370)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecccccccc---c--cccceEEECCCCCHHHHHHHHh-------CCC
Confidence            578999999999999999999999999998888764321110   0  0124678899999887766654       689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------------  158 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------------  158 (264)
                      ++||+|+.....  ....   .+....+..|+.++.++++++.    +.+ ..++|++||...+.               
T Consensus        88 ~Vih~Aa~~~~~--~~~~---~~~~~~~~~N~~~t~nll~aa~----~~~-vk~~V~~SS~~vYg~~~~~~~~~~~~E~~  157 (370)
T PLN02695         88 HVFNLAADMGGM--GFIQ---SNHSVIMYNNTMISFNMLEAAR----ING-VKRFFYASSACIYPEFKQLETNVSLKESD  157 (370)
T ss_pred             EEEEcccccCCc--cccc---cCchhhHHHHHHHHHHHHHHHH----HhC-CCEEEEeCchhhcCCccccCcCCCcCccc
Confidence            999999865321  1111   1223456789999988888763    333 45899999864221               


Q ss_pred             --CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHh-hcC--CCCC------C
Q 041914          159 --GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEK-LFE--PQTP------L  225 (264)
Q Consensus       159 --~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~-~~~--~~~~------~  225 (264)
                        +..+...|+.+|.+.+.+++.++..   .++++..+.|+.+..|......  ......+.. ...  ...+      .
T Consensus       158 ~~p~~p~s~Yg~sK~~~E~~~~~~~~~---~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~  234 (370)
T PLN02695        158 AWPAEPQDAYGLEKLATEELCKHYTKD---FGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQ  234 (370)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCe
Confidence              2335668999999999999887665   4899999999998887421100  011112211 111  1111      1


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ...++.++|++++++.++...    .++.+++.+|..
T Consensus       235 ~r~~i~v~D~a~ai~~~~~~~----~~~~~nv~~~~~  267 (370)
T PLN02695        235 TRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  267 (370)
T ss_pred             EEeEEeHHHHHHHHHHHHhcc----CCCceEecCCCc
Confidence            134789999999999877532    256788876643

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.68  E-value=3e-15  Score=121.66  Aligned_cols=150  Identities=17%  Similarity=0.223  Sum_probs=120.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|-||.+.+.+|.+.|++|+++..-.....+.+...    ...+++.|+.|.+.+++++++-     +||.+
T Consensus         1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~~-----~idaV   71 (329)
T COG1087           1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEEN-----KIDAV   71 (329)
T ss_pred             CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHhc-----CCCEE
Confidence            47899999999999999999999999888876665554444322    1579999999999999998866     79999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------CCCCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------CGGKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~  164 (264)
                      ||.||....+      .+-+...+.++.|+.+++.|++++    ++.+ -..+||-||....           .+..+..
T Consensus        72 iHFAa~~~Vg------ESv~~Pl~Yy~NNv~gTl~Ll~am----~~~g-v~~~vFSStAavYG~p~~~PI~E~~~~~p~N  140 (329)
T COG1087          72 VHFAASISVG------ESVQNPLKYYDNNVVGTLNLIEAM----LQTG-VKKFIFSSTAAVYGEPTTSPISETSPLAPIN  140 (329)
T ss_pred             EECccccccc------hhhhCHHHHHhhchHhHHHHHHHH----HHhC-CCEEEEecchhhcCCCCCcccCCCCCCCCCC
Confidence            9999976554      456678899999999999988876    4544 4577877776553           2345677


Q ss_pred             hhhchHHHHHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLG  185 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~  185 (264)
                      +|+.||...+.+.+.++..+.
T Consensus       141 PYG~sKlm~E~iL~d~~~a~~  161 (329)
T COG1087         141 PYGRSKLMSEEILRDAAKANP  161 (329)
T ss_pred             cchhHHHHHHHHHHHHHHhCC
Confidence            899999999999999988753

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=99.68  E-value=5.8e-15  Score=130.66  Aligned_cols=217  Identities=16%  Similarity=0.129  Sum_probs=141.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ..+++|||||+|.||.+++++|.++|++|+++.+.................+.++..|+.+..     +       .++|
T Consensus       119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-------~~~D  186 (436)
T PLN02166        119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-------LEVD  186 (436)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-------cCCC
Confidence            457899999999999999999999999988887753322222221112235678888887542     1       2689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------------  158 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------------  158 (264)
                      +|||+|+.....  .. .   .+-.+.+++|+.++.++++++..    .+  .++|++||...+.               
T Consensus       187 ~ViHlAa~~~~~--~~-~---~~p~~~~~~Nv~gT~nLleaa~~----~g--~r~V~~SS~~VYg~~~~~p~~E~~~~~~  254 (436)
T PLN02166        187 QIYHLACPASPV--HY-K---YNPVKTIKTNVMGTLNMLGLAKR----VG--ARFLLTSTSEVYGDPLEHPQKETYWGNV  254 (436)
T ss_pred             EEEECceeccch--hh-c---cCHHHHHHHHHHHHHHHHHHHHH----hC--CEEEEECcHHHhCCCCCCCCCccccccC
Confidence            999999865432  11 1   13467899999999999888743    23  3899999875331               


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC--------CCCCC
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP--------LEGVV  229 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  229 (264)
                       |..+...|+.+|.+.+.+++.+...   .++.+..+.|+.+..+............+........+        ..+.+
T Consensus       255 ~p~~p~s~Yg~SK~~aE~~~~~y~~~---~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdf  331 (436)
T PLN02166        255 NPIGERSCYDEGKRTAETLAMDYHRG---AGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSF  331 (436)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHH---hCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEee
Confidence             2223456999999999999887665   37888888888777764211000011111111111111        11347


Q ss_pred             CChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +.++|+++++..++...   . +..+++.+|.
T Consensus       332 i~V~Dva~ai~~~~~~~---~-~giyNIgs~~  359 (436)
T PLN02166        332 QYVSDLVDGLVALMEGE---H-VGPFNLGNPG  359 (436)
T ss_pred             EEHHHHHHHHHHHHhcC---C-CceEEeCCCC
Confidence            89999999999887432   2 3478887654

>CHL00194 ycf39 Ycf39; Provisional

Probab=99.67  E-value=6.5e-15  Score=125.65  Aligned_cols=207  Identities=11%  Similarity=0.041  Sum_probs=134.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++||||+|.+|++++++|.++|++|.++.|+.++.. .+.    ...+.++.+|++|++++.++++       ++|++|
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~-~l~----~~~v~~v~~Dl~d~~~l~~al~-------g~d~Vi   69 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKAS-FLK----EWGAELVYGDLSLPETLPPSFK-------GVTAII   69 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhh-hHh----hcCCEEEECCCCCHHHHHHHHC-------CCCEEE
Confidence            6999999999999999999999999999998754431 111    1257889999999998887775       689999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      |+++....           +.....++|+.++.++++++    ++.+ -.++|++||.....  .+...|..+|...+.+
T Consensus        70 ~~~~~~~~-----------~~~~~~~~~~~~~~~l~~aa----~~~g-vkr~I~~Ss~~~~~--~~~~~~~~~K~~~e~~  131 (317)
T CHL00194         70 DASTSRPS-----------DLYNAKQIDWDGKLALIEAA----KAAK-IKRFIFFSILNAEQ--YPYIPLMKLKSDIEQK  131 (317)
T ss_pred             ECCCCCCC-----------CccchhhhhHHHHHHHHHHH----HHcC-CCEEEEeccccccc--cCCChHHHHHHHHHHH
Confidence            98763211           12235567888887777766    3444 45999999864421  1234577788877665


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEE
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV  256 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~  256 (264)
                      .+       ..++.+..+.|+.+...+..... .+.-...............+++++|+|+++..++...  ...|+.++
T Consensus       132 l~-------~~~l~~tilRp~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~--~~~~~~~n  201 (317)
T CHL00194        132 LK-------KSGIPYTIFRLAGFFQGLISQYA-IPILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLP--ETKNKTFP  201 (317)
T ss_pred             HH-------HcCCCeEEEeecHHhhhhhhhhh-hhhccCCceEecCCCCccCccCHHHHHHHHHHHhcCc--cccCcEEE
Confidence            43       24788899999865433221110 0000000000000111134578899999999888532  23588999


Q ss_pred             ecCeeec
Q 041914          257 VDGGFLI  263 (264)
Q Consensus       257 ~dgG~~~  263 (264)
                      +.|+..+
T Consensus       202 i~g~~~~  208 (317)
T CHL00194        202 LVGPKSW  208 (317)
T ss_pred             ecCCCcc
Confidence            9887543

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=99.66  E-value=1.3e-14  Score=121.95  Aligned_cols=195  Identities=17%  Similarity=0.112  Sum_probs=134.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|.||.+++++|.++|++|+++.|.                    .+|+.+.+++.++++..     ++|++|
T Consensus         1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~--------------------~~d~~~~~~~~~~~~~~-----~~d~vi   55 (287)
T TIGR01214         1 RILITGANGQLGRELVQQLSPEGRVVVALTSS--------------------QLDLTDPEALERLLRAI-----RPDAVV   55 (287)
T ss_pred             CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc--------------------ccCCCCHHHHHHHHHhC-----CCCEEE
Confidence            47999999999999999999999998888774                    46999999988887643     689999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      |+++.....      ......+..+++|+.++.++++++.    +.+  .++|++||...+.+           ..+...
T Consensus        56 ~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~--~~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~  123 (287)
T TIGR01214        56 NTAAYTDVD------GAESDPEKAFAVNALAPQNLARAAA----RHG--ARLVHISTDYVFDGEGKRPYREDDATNPLNV  123 (287)
T ss_pred             ECCcccccc------ccccCHHHHHHHHHHHHHHHHHHHH----HcC--CeEEEEeeeeeecCCCCCCCCCCCCCCCcch
Confidence            999865322      1122456788999999999988864    323  38999998653211           123567


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC------CCCCCCChHHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP------LEGVVLRAGHVADAV  239 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~edva~~~  239 (264)
                      |+.+|.+.+.+++.+       +.++..+.|+.+..+.....   .............+      ....++..+|+++++
T Consensus       124 Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~  193 (287)
T TIGR01214       124 YGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGGGGRN---FVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVI  193 (287)
T ss_pred             hhHHHHHHHHHHHHh-------CCCeEEEEeeecccCCCCCC---HHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHH
Confidence            999999998888764       35788999998887652110   01111111111111      113456789999999


Q ss_pred             HHHhCCCCCCeeccEEEecCe
Q 041914          240 LFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ..++... .. .|+.+++.++
T Consensus       194 ~~~~~~~-~~-~~~~~ni~~~  212 (287)
T TIGR01214       194 AALLQRL-AR-ARGVYHLANS  212 (287)
T ss_pred             HHHHhhc-cC-CCCeEEEECC
Confidence            9988532 12 2456666554

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=99.66  E-value=1.1e-14  Score=123.85  Aligned_cols=218  Identities=16%  Similarity=0.138  Sum_probs=140.4

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           18 AIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +|||||+|.||.++++.|.++|+ .|+++.|.....  .+.+.    ....+..|+.+.+.++.+.+.   .+.++|++|
T Consensus         1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~--~~~~~----~~~~~~~d~~~~~~~~~~~~~---~~~~~D~vv   71 (314)
T TIGR02197         1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH--KFLNL----ADLVIADYIDKEDFLDRLEKG---AFGKIEAIF   71 (314)
T ss_pred             CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch--hhhhh----hheeeeccCcchhHHHHHHhh---ccCCCCEEE
Confidence            58999999999999999999998 566665543321  11111    113466788887766665542   345899999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      |+|+....        +.++.+..+++|+.++.++++++..    .+  .++|++||......           ..+...
T Consensus        72 h~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~~~~~----~~--~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~  137 (314)
T TIGR02197        72 HQGACSDT--------TETDGEYMMENNYQYSKRLLDWCAE----KG--IPFIYASSAATYGDGEAGFREGRELERPLNV  137 (314)
T ss_pred             ECccccCc--------cccchHHHHHHHHHHHHHHHHHHHH----hC--CcEEEEccHHhcCCCCCCcccccCcCCCCCH
Confidence            99996422        1234577889999999999988743    23  37999999754321           125678


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCC--------------CCCCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTP--------------LEGVV  229 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~--------------~~~~~  229 (264)
                      |+.+|.+.+.+++....+. ..++.+..+.|+.+..+........  .............+              ....+
T Consensus       138 Y~~sK~~~e~~~~~~~~~~-~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  216 (314)
T TIGR02197       138 YGYSKFLFDQYVRRRVLPE-ALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDF  216 (314)
T ss_pred             HHHHHHHHHHHHHHHhHhh-ccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeee
Confidence            9999999999998643332 2256788888887777642211000  01111111111000              11347


Q ss_pred             CChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +..+|+++++..++..    ..+..+++.+|..+
T Consensus       217 i~v~D~a~~i~~~~~~----~~~~~yni~~~~~~  246 (314)
T TIGR02197       217 VYVKDVVDVNLWLLEN----GVSGIFNLGTGRAR  246 (314)
T ss_pred             EEHHHHHHHHHHHHhc----ccCceEEcCCCCCc
Confidence            8899999999999864    24568888877543

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=99.66  E-value=1.8e-14  Score=122.36  Aligned_cols=214  Identities=21%  Similarity=0.223  Sum_probs=147.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc-cEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL-DIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i-d~l   95 (264)
                      .+|||||+|.||.+++++|.++|++|+.+.|...+.....      ..+.++.+|+++.+......+       .. |.+
T Consensus         2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~-------~~~d~v   68 (314)
T COG0451           2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLL------SGVEFVVLDLTDRDLVDELAK-------GVPDAV   68 (314)
T ss_pred             eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCccccccc------cccceeeecccchHHHHHHHh-------cCCCEE
Confidence            3899999999999999999999999999998766543322      246789999999855555554       33 999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-------------CC
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-------------KR  162 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-------------~~  162 (264)
                      ||+|+......   . ... +....+.+|+.++.++++++..    .+ ..++|+.||.....+.             .+
T Consensus        69 ih~aa~~~~~~---~-~~~-~~~~~~~~nv~gt~~ll~aa~~----~~-~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p  138 (314)
T COG0451          69 IHLAAQSSVPD---S-NAS-DPAEFLDVNVDGTLNLLEAARA----AG-VKRFVFASSVSVVYGDPPPLPIDEDLGPPRP  138 (314)
T ss_pred             EEccccCchhh---h-hhh-CHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEeCCCceECCCCCCCCcccccCCCCC
Confidence            99999875431   1 111 4567899999999999999855    33 5688887775533211             12


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-CChHHHHhhcCCCCC---CC------CCCCCh
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-MPADEVEKLFEPQTP---LE------GVVLRA  232 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~---~~------~~~~~~  232 (264)
                      ...|+.+|.+.+.+++....   ..++.+..+.|+.+..+....... ..............+   ..      ..++.+
T Consensus       139 ~~~Yg~sK~~~E~~~~~~~~---~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  215 (314)
T COG0451         139 LNPYGVSKLAAEQLLRAYAR---LYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYV  215 (314)
T ss_pred             CCHHHHHHHHHHHHHHHHHH---HhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeH
Confidence            22599999999999999888   458999999999888776443211 111111111111111   10      136789


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      +|+++++..++......    .+++.++
T Consensus       216 ~D~a~~~~~~~~~~~~~----~~ni~~~  239 (314)
T COG0451         216 DDVADALLLALENPDGG----VFNIGSG  239 (314)
T ss_pred             HHHHHHHHHHHhCCCCc----EEEeCCC
Confidence            99999999998644332    6777665

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=99.65  E-value=1.7e-14  Score=122.21  Aligned_cols=205  Identities=17%  Similarity=0.157  Sum_probs=136.8

Q ss_pred             EEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEEc
Q 041914           19 IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSN   98 (264)
Q Consensus        19 lItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~~   98 (264)
                      |||||+|.||.++++.|.+.|+.|+++.++                   ..+|++|.+++.++++..     ++|++||+
T Consensus         1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~-------------------~~~Dl~~~~~l~~~~~~~-----~~d~Vih~   56 (306)
T PLN02725          1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH-------------------KELDLTRQADVEAFFAKE-----KPTYVILA   56 (306)
T ss_pred             CcccCCCcccHHHHHHHHhCCCcEEEeecc-------------------ccCCCCCHHHHHHHHhcc-----CCCEEEEe
Confidence            699999999999999999999987665432                   247999999888877653     68999999


Q ss_pred             CCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---------------CCC-
Q 041914           99 AGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---------------GKR-  162 (264)
Q Consensus        99 ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---------------~~~-  162 (264)
                      |+......     ...++..+.++.|+.++..+++++.    +.+ ..++|++||.....+               ..+ 
T Consensus        57 A~~~~~~~-----~~~~~~~~~~~~n~~~~~~ll~~~~----~~~-~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~  126 (306)
T PLN02725         57 AAKVGGIH-----ANMTYPADFIRENLQIQTNVIDAAY----RHG-VKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPT  126 (306)
T ss_pred             eeeecccc-----hhhhCcHHHHHHHhHHHHHHHHHHH----HcC-CCeEEEeCceeecCCCCCCCCCHHHhccCCCCCC
Confidence            98743210     0111234678889999888888874    333 468999999754321               111 


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHhhc-----C--------CCCCCCC
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEKLF-----E--------PQTPLEG  227 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~-----~--------~~~~~~~  227 (264)
                      ...|+.+|.+.+.+++.+..++   ++++..+.|+.+..+......  ....+.....+     .        .......
T Consensus       127 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~  203 (306)
T PLN02725        127 NEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLR  203 (306)
T ss_pred             cchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeee
Confidence            2349999999999888876664   789999999988877421100  00011111100     0        0111114


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .++.++|++++++.++...   ..+..+++.+|..+
T Consensus       204 ~~i~v~Dv~~~~~~~~~~~---~~~~~~ni~~~~~~  236 (306)
T PLN02725        204 EFLHVDDLADAVVFLMRRY---SGAEHVNVGSGDEV  236 (306)
T ss_pred             ccccHHHHHHHHHHHHhcc---ccCcceEeCCCCcc
Confidence            6889999999999988643   22345688776543

>PLN02996 fatty acyl-CoA reductase

Probab=99.59  E-value=1.3e-13  Score=123.84  Aligned_cols=224  Identities=13%  Similarity=0.094  Sum_probs=144.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC---cEEEEecCchh--hHHHHH-hh------------h-------CCCcEE
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA---RMIVIADIQDE--LGRQVA-TS------------I-------GVGKCH   66 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~---~v~~~~~~~~~--~~~~~~-~~------------~-------~~~~~~   66 (264)
                      .++||++|||||||.||..++..|++.+-   +|+++.|....  ..+.+. +.            .       ...++.
T Consensus         8 ~~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~   87 (491)
T PLN02996          8 FLENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT   87 (491)
T ss_pred             HhCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence            37899999999999999999999998653   35666665431  111111 00            0       014689


Q ss_pred             EEEecCCC-------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 041914           67 YVHCDVTN-------ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVM  139 (264)
Q Consensus        67 ~~~~D~s~-------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~  139 (264)
                      ++..|+++       .+.++.+++       .+|++||+|+.....         +..+..+++|+.++.++++.+... 
T Consensus        88 ~i~GDl~~~~LGLs~~~~~~~l~~-------~vD~ViH~AA~v~~~---------~~~~~~~~~Nv~gt~~ll~~a~~~-  150 (491)
T PLN02996         88 PVPGDISYDDLGVKDSNLREEMWK-------EIDIVVNLAATTNFD---------ERYDVALGINTLGALNVLNFAKKC-  150 (491)
T ss_pred             EEecccCCcCCCCChHHHHHHHHh-------CCCEEEECccccCCc---------CCHHHHHHHHHHHHHHHHHHHHhc-
Confidence            99999984       333444443       689999999976421         146778999999999998877431 


Q ss_pred             HcCCCCcEEEEecCCCCCCCC-----------------------------------------------------------
Q 041914          140 VEGGVRGSIVCTASVAGSCGG-----------------------------------------------------------  160 (264)
Q Consensus       140 ~~~~~~~~iv~iss~~~~~~~-----------------------------------------------------------  160 (264)
                        .+ ..++|++||.......                                                           
T Consensus       151 --~~-~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (491)
T PLN02996        151 --VK-VKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERA  227 (491)
T ss_pred             --CC-CCeEEEEeeeEEecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHH
Confidence              12 3488999887643110                                                           


Q ss_pred             ---CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhhcCCC--------CC
Q 041914          161 ---KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKLFEPQ--------TP  224 (264)
Q Consensus       161 ---~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~--------~~  224 (264)
                         .....|+.||+..+.+++..+     .++.+..+.|..+.++......+..     .......+...        ..
T Consensus       228 ~~~~~pn~Y~~TK~~aE~lv~~~~-----~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~  302 (491)
T PLN02996        228 KLHGWPNTYVFTKAMGEMLLGNFK-----ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPN  302 (491)
T ss_pred             HhCCCCCchHhhHHHHHHHHHHhc-----CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCC
Confidence               012359999999999996542     2799999999999887543221111     01111111111        11


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCC-CCeeccEEEecCe
Q 041914          225 LEGVVLRAGHVADAVLFLACRDS-EFVTGHDLVVDGG  260 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~-~~~~G~~i~~dgG  260 (264)
                      ....++.++|++++++.++.... ..-.+.++++.+|
T Consensus       303 ~~~D~v~Vddvv~a~l~a~~~~~~~~~~~~vYNi~s~  339 (491)
T PLN02996        303 SVLDVIPADMVVNAMIVAMAAHAGGQGSEIIYHVGSS  339 (491)
T ss_pred             eecceecccHHHHHHHHHHHHhhccCCCCcEEEecCC
Confidence            12557888999999888775321 1124678898876

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=99.59  E-value=2e-13  Score=115.55  Aligned_cols=145  Identities=15%  Similarity=0.052  Sum_probs=106.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|.||.+++++|.++| +|+.+.|...                .+..|++|.+.+.++++..     ++|++|
T Consensus         2 ~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~----------------~~~~Dl~d~~~~~~~~~~~-----~~D~Vi   59 (299)
T PRK09987          2 NILLFGKTGQVGWELQRALAPLG-NLIALDVHST----------------DYCGDFSNPEGVAETVRKI-----RPDVIV   59 (299)
T ss_pred             eEEEECCCCHHHHHHHHHhhccC-CEEEeccccc----------------cccCCCCCHHHHHHHHHhc-----CCCEEE
Confidence            69999999999999999999999 7776666421                2457999999998887743     689999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~  165 (264)
                      |+|+.....      ...++.+..+.+|+.++.++.+++..    .+  .++|++||...+.           +..+...
T Consensus        60 h~Aa~~~~~------~~~~~~~~~~~~N~~~~~~l~~aa~~----~g--~~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~  127 (299)
T PRK09987         60 NAAAHTAVD------KAESEPEFAQLLNATSVEAIAKAANE----VG--AWVVHYSTDYVFPGTGDIPWQETDATAPLNV  127 (299)
T ss_pred             ECCccCCcc------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEccceEECCCCCCCcCCCCCCCCCCH
Confidence            999976432      11223456678999999999888743    33  4799999864321           2235567


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                      |+.+|.+.+.+++....       ....+.|+.+..+
T Consensus       128 Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        128 YGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             HHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence            99999999998865432       2356667666654

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.58  E-value=1.8e-13  Score=127.85  Aligned_cols=220  Identities=20%  Similarity=0.152  Sum_probs=140.8

Q ss_pred             EEEEeCCCChhHHHHHHHHH--HcCCcEEEEecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHH--HHHHHHHHHhcCC
Q 041914           17 VAIITGGASGIGETTARLFA--DHGARMIVIADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQV--KALVDSTVQNYGQ   91 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~--~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~--~~~~~~~~~~~~~   91 (264)
                      ++|||||+|.||.+++++|.  +.|++|+++.|+.... ...+.......++.++.+|++|++..  ...++++    .+
T Consensus         2 ~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l----~~   77 (657)
T PRK07201          2 RYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL----GD   77 (657)
T ss_pred             eEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh----cC
Confidence            69999999999999999999  5899998888864321 12221112224688999999985310  1112222    37


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------------
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------------  159 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------------  159 (264)
                      +|++||+|+.....      .   ...+..++|+.++.++++.+.    +.+ ..++|++||......            
T Consensus        78 ~D~Vih~Aa~~~~~------~---~~~~~~~~nv~gt~~ll~~a~----~~~-~~~~v~~SS~~v~g~~~~~~~e~~~~~  143 (657)
T PRK07201         78 IDHVVHLAAIYDLT------A---DEEAQRAANVDGTRNVVELAE----RLQ-AATFHHVSSIAVAGDYEGVFREDDFDE  143 (657)
T ss_pred             CCEEEECceeecCC------C---CHHHHHHHHhHHHHHHHHHHH----hcC-CCeEEEEeccccccCccCccccccchh
Confidence            99999999975432      1   235567889999888877753    333 468999998765421            


Q ss_pred             -CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-CC-h----HHHHhh--cCCCCC------
Q 041914          160 -GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-MP-A----DEVEKL--FEPQTP------  224 (264)
Q Consensus       160 -~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~-~----~~~~~~--~~~~~~------  224 (264)
                       ......|+.+|...+.+++.      ..++++..+.|+.+..+....... .. .    ......  .....+      
T Consensus       144 ~~~~~~~Y~~sK~~~E~~~~~------~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (657)
T PRK07201        144 GQGLPTPYHRTKFEAEKLVRE------ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDG  217 (657)
T ss_pred             hcCCCCchHHHHHHHHHHHHH------cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCC
Confidence             12235699999999988753      247999999999987753210000 00 0    011110  000011      


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ....++.++|+++++..++..  ....|+.|++.++..
T Consensus       218 ~~~~~v~vddva~ai~~~~~~--~~~~g~~~ni~~~~~  253 (657)
T PRK07201        218 GRTNIVPVDYVADALDHLMHK--DGRDGQTFHLTDPKP  253 (657)
T ss_pred             CeeeeeeHHHHHHHHHHHhcC--cCCCCCEEEeCCCCC
Confidence            012356789999999998853  345789999987643

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=99.58  E-value=9.1e-13  Score=97.63  Aligned_cols=218  Identities=19%  Similarity=0.206  Sum_probs=159.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~i   92 (264)
                      ..+|+|.|+-+.+|.++++.|..+++.|.-+.-.+++..         +.-..+..|-+-.++-+.+++++.+..  .++
T Consensus         3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~A---------d~sI~V~~~~swtEQe~~v~~~vg~sL~gekv   73 (236)
T KOG4022|consen    3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA---------DSSILVDGNKSWTEQEQSVLEQVGSSLQGEKV   73 (236)
T ss_pred             CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc---------cceEEecCCcchhHHHHHHHHHHHHhhccccc
Confidence            478999999999999999999999999766654433321         123456667776788888888887755  479


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |.+++-||.+..+...-.++ ..+-+-++...++......+.+-.+++.   .|..-..+.-.+..+.|++..|+++|+|
T Consensus        74 Dav~CVAGGWAGGnAksKdl-~KNaDLMwKQSvwtSaIsa~lAt~HLK~---GGLL~LtGAkaAl~gTPgMIGYGMAKaA  149 (236)
T KOG4022|consen   74 DAVFCVAGGWAGGNAKSKDL-VKNADLMWKQSVWTSAISAKLATTHLKP---GGLLQLTGAKAALGGTPGMIGYGMAKAA  149 (236)
T ss_pred             ceEEEeeccccCCCcchhhh-hhchhhHHHHHHHHHHHHHHHHHhccCC---CceeeecccccccCCCCcccchhHHHHH
Confidence            99999999886553211111 1122335666666655555555555554   4677777888888999999999999999


Q ss_pred             HHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          173 VIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       173 l~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +..++++++.+-.  +.|--+.+|.|=..+|||.+++...      ..+..+.       ..+++++..+....+..+.-
T Consensus       150 VHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNRKwMP~------ADfssWT-------PL~fi~e~flkWtt~~~RPs  216 (236)
T KOG4022|consen  150 VHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNRKWMPN------ADFSSWT-------PLSFISEHFLKWTTETSRPS  216 (236)
T ss_pred             HHHHHHHhcccccCCCCCceeEEEeeeeccCccccccCCC------CcccCcc-------cHHHHHHHHHHHhccCCCCC
Confidence            9999999998764  4567888899999999999877431      1223333       44689999999888878888


Q ss_pred             eccEEEec
Q 041914          251 TGHDLVVD  258 (264)
Q Consensus       251 ~G~~i~~d  258 (264)
                      +|..+.+.
T Consensus       217 sGsLlqi~  224 (236)
T KOG4022|consen  217 SGSLLQIT  224 (236)
T ss_pred             CCceEEEE
Confidence            89887764

>PRK05865 hypothetical protein; Provisional

Probab=99.57  E-value=9.6e-14  Score=130.12  Aligned_cols=184  Identities=14%  Similarity=0.117  Sum_probs=126.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++||||+|.||++++++|.++|++|+++.|+..+..        ...+.++.+|++|.+++.++++       ++|++|
T Consensus         2 kILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--------~~~v~~v~gDL~D~~~l~~al~-------~vD~VV   66 (854)
T PRK05865          2 RIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW--------PSSADFIAADIRDATAVESAMT-------GADVVA   66 (854)
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--------ccCceEEEeeCCCHHHHHHHHh-------CCCEEE
Confidence            6899999999999999999999999888887643210        1246789999999999888776       589999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      |+|+...    +           .+++|+.++.++++++    ++.+ .+++|++||..              |.+.+.+
T Consensus        67 HlAa~~~----~-----------~~~vNv~GT~nLLeAa----~~~g-vkr~V~iSS~~--------------K~aaE~l  112 (854)
T PRK05865         67 HCAWVRG----R-----------NDHINIDGTANVLKAM----AETG-TGRIVFTSSGH--------------QPRVEQM  112 (854)
T ss_pred             ECCCccc----c-----------hHHHHHHHHHHHHHHH----HHcC-CCeEEEECCcH--------------HHHHHHH
Confidence            9997531    1           3578999887776654    4544 56999999863              7777765


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHh--hcCCCCCC-CCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK--LFEPQTPL-EGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      ++    +   .++.+..+.|+.+..+......    .....  .+...... ...++.++|+++++..++...  ...|.
T Consensus       113 l~----~---~gl~~vILRp~~VYGP~~~~~i----~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~--~~~gg  179 (854)
T PRK05865        113 LA----D---CGLEWVAVRCALIFGRNVDNWV----QRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDT--VIDSG  179 (854)
T ss_pred             HH----H---cCCCEEEEEeceEeCCChHHHH----HHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCC--CcCCC
Confidence            53    2   4799999999988876321100    00000  00000000 024788999999999887422  22355


Q ss_pred             EEEecCeee
Q 041914          254 DLVVDGGFL  262 (264)
Q Consensus       254 ~i~~dgG~~  262 (264)
                      .+++.+|..
T Consensus       180 vyNIgsg~~  188 (854)
T PRK05865        180 PVNLAAPGE  188 (854)
T ss_pred             eEEEECCCc
Confidence            788876643

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=99.57  E-value=1.8e-12  Score=107.23  Aligned_cols=184  Identities=12%  Similarity=0.094  Sum_probs=148.2

Q ss_pred             CcEEEEeCC-CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC---
Q 041914           15 GKVAIITGG-ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG---   90 (264)
Q Consensus        15 ~k~vlItGa-s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~---   90 (264)
                      ..+|||.|. ...|++.++.-|-++|+-|+++..+.++. +.++.+. ...+.....|..++.++...+.+..+...   
T Consensus         3 ~evVvI~Gs~~~PltR~la~DLeRRGFIV~v~~~~~ed~-~~ve~e~-~~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~   80 (299)
T PF08643_consen    3 KEVVVIAGSPHDPLTRSLALDLERRGFIVYVTVSSAEDE-KYVESED-RPDIRPLWLDDSDPSSIHASLSRFASLLSRPH   80 (299)
T ss_pred             eeEEEEECCCCCccHHHHHHHHhhCCeEEEEEeCCHHHH-HHHHhcc-CCCCCCcccCCCCCcchHHHHHHHHHHhcCCC
Confidence            468899996 79999999999999999977777766554 3333333 34588888898887777777777766543   


Q ss_pred             -----------CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHc---CCCCcEEEEecCCCC
Q 041914           91 -----------QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVE---GGVRGSIVCTASVAG  156 (264)
Q Consensus        91 -----------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~---~~~~~~iv~iss~~~  156 (264)
                                 .+..+|....... ...|++.++.+.|.+.++.|+..++.++|.++|+|+.   ++ ...|++.-|+..
T Consensus        81 ~p~~~~~~h~l~L~svi~~Psl~y-p~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~-~~iil~~Psi~s  158 (299)
T PF08643_consen   81 VPFPGAPPHHLQLKSVIFIPSLSY-PTGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQK-SKIILFNPSISS  158 (299)
T ss_pred             CCCCCCCCceeEEEEEEEecCCCC-CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-ceEEEEeCchhh
Confidence                       4566777766555 3468999999999999999999999999999999998   33 334555557777


Q ss_pred             CCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc
Q 041914          157 SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       157 ~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                      ....|..+.-....+++.+|++.|++|+++.+|.|..+..|.++-.
T Consensus       159 sl~~PfhspE~~~~~al~~~~~~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  159 SLNPPFHSPESIVSSALSSFFTSLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             ccCCCccCHHHHHHHHHHHHHHHHHHHhhhcCCceEEEEeeeeccc
Confidence            7788889999999999999999999999999999999999888755

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=99.56  E-value=2.7e-13  Score=106.41  Aligned_cols=173  Identities=14%  Similarity=0.142  Sum_probs=124.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      |+|+||+|.+|+.++++|.++|++|.++.|+.++..+       ...+.++.+|+.|++++.+++.       +.|++|+
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-------~~~~~~~~~d~~d~~~~~~al~-------~~d~vi~   66 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-------SPGVEIIQGDLFDPDSVKAALK-------GADAVIH   66 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-------CTTEEEEESCTTCHHHHHHHHT-------TSSEEEE
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-------ccccccceeeehhhhhhhhhhh-------hcchhhh
Confidence            6899999999999999999999999999999876544       3478999999999988888776       7899999


Q ss_pred             cCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC---------chhhc
Q 041914           98 NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR---------TDYHM  168 (264)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~---------~~y~~  168 (264)
                      ++|....           +            ...++.++..+++.+ ..++|++|+.......+..         ..|..
T Consensus        67 ~~~~~~~-----------~------------~~~~~~~~~a~~~~~-~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~  122 (183)
T PF13460_consen   67 AAGPPPK-----------D------------VDAAKNIIEAAKKAG-VKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYAR  122 (183)
T ss_dssp             CCHSTTT-----------H------------HHHHHHHHHHHHHTT-SSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHH
T ss_pred             hhhhhcc-----------c------------ccccccccccccccc-cccceeeeccccCCCCCcccccccccchhhhHH
Confidence            9964321           0            444566666667766 6699999998877654432         13444


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|...+.+.       ...+++...+.|+.+..+.....         .......+.....++.+|+|++++.++.
T Consensus       123 ~~~~~e~~~-------~~~~~~~~ivrp~~~~~~~~~~~---------~~~~~~~~~~~~~i~~~DvA~~~~~~l~  182 (183)
T PF13460_consen  123 DKREAEEAL-------RESGLNWTIVRPGWIYGNPSRSY---------RLIKEGGPQGVNFISREDVAKAIVEALE  182 (183)
T ss_dssp             HHHHHHHHH-------HHSTSEEEEEEESEEEBTTSSSE---------EEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHH-------HhcCCCEEEEECcEeEeCCCcce---------eEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence            444333222       34589999999999877653211         1111122222467799999999998764

...

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=99.54  E-value=1.3e-13  Score=113.20  Aligned_cols=155  Identities=16%  Similarity=0.261  Sum_probs=122.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh---HHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~---~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++||||||+|-||.+.+.+|.++|+.|+++..-....   .+..++... ...+.++..|+.|...+++++++.     
T Consensus         2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~-----   76 (343)
T KOG1371|consen    2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEV-----   76 (343)
T ss_pred             CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhc-----
Confidence            68999999999999999999999999988887544433   333333333 257999999999999999999877     


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------C
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------G  159 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~  159 (264)
                      .+|.|+|.|+.-...      .+.+...+.++.|+.++++++...    ++.+ ...+|+.||....-           +
T Consensus        77 ~fd~V~Hfa~~~~vg------eS~~~p~~Y~~nNi~gtlnlLe~~----~~~~-~~~~V~sssatvYG~p~~ip~te~~~  145 (343)
T KOG1371|consen   77 KFDAVMHFAALAAVG------ESMENPLSYYHNNIAGTLNLLEVM----KAHN-VKALVFSSSATVYGLPTKVPITEEDP  145 (343)
T ss_pred             CCceEEeehhhhccc------hhhhCchhheehhhhhHHHHHHHH----HHcC-CceEEEecceeeecCcceeeccCcCC
Confidence            699999999987655      344455889999999999988765    5555 67899988877542           2


Q ss_pred             CC-CCchhhchHHHHHHHHHHHHHHhC
Q 041914          160 GK-RRTDYHMSKHAVIGLVRSASVQLG  185 (264)
Q Consensus       160 ~~-~~~~y~~sK~al~~~~~~la~e~~  185 (264)
                      .. +...|+.+|.+++...+.....+.
T Consensus       146 t~~p~~pyg~tK~~iE~i~~d~~~~~~  172 (343)
T KOG1371|consen  146 TDQPTNPYGKTKKAIEEIIHDYNKAYG  172 (343)
T ss_pred             CCCCCCcchhhhHHHHHHHHhhhcccc
Confidence            23 778899999999999998887653

>PLN02778 3,5-epimerase/4-reductase

Probab=99.48  E-value=7.7e-12  Score=105.76  Aligned_cols=193  Identities=17%  Similarity=0.136  Sum_probs=117.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|.||.+++++|.++|++|++..                       .|+.+.+.+...++..     ++|++
T Consensus        10 ~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~-----------------------~~~~~~~~v~~~l~~~-----~~D~V   61 (298)
T PLN02778         10 LKFLIYGKTGWIGGLLGKLCQEQGIDFHYGS-----------------------GRLENRASLEADIDAV-----KPTHV   61 (298)
T ss_pred             CeEEEECCCCHHHHHHHHHHHhCCCEEEEec-----------------------CccCCHHHHHHHHHhc-----CCCEE
Confidence            6899999999999999999999999865321                       2344555555444432     68999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC--C----------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG--S----------------  157 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~--~----------------  157 (264)
                      ||+|+......   .+...++-.+.+++|+.++.++++++..    .+ . +.+++||...  .                
T Consensus        62 iH~Aa~~~~~~---~~~~~~~p~~~~~~Nv~gt~~ll~aa~~----~g-v-~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~  132 (298)
T PLN02778         62 FNAAGVTGRPN---VDWCESHKVETIRANVVGTLTLADVCRE----RG-L-VLTNYATGCIFEYDDAHPLGSGIGFKEED  132 (298)
T ss_pred             EECCcccCCCC---chhhhhCHHHHHHHHHHHHHHHHHHHHH----hC-C-CEEEEecceEeCCCCCCCcccCCCCCcCC
Confidence            99999764321   1112234578899999999999998753    23 2 3344443221  1                


Q ss_pred             CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEE-eeCCcccCcccccccCCChHHHHhhcCCC--CCCCCCCCChHH
Q 041914          158 CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC-VSPHGLATPLTCHAYGMPADEVEKLFEPQ--TPLEGVVLRAGH  234 (264)
Q Consensus       158 ~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~-v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ed  234 (264)
                      .+.++...|+.+|.+.+.+++.++..   .++|+.. ..++..    .      ............  ....+.+...+|
T Consensus       133 ~p~~~~s~Yg~sK~~~E~~~~~y~~~---~~lr~~~~~~~~~~----~------~~~fi~~~~~~~~~~~~~~s~~yv~D  199 (298)
T PLN02778        133 TPNFTGSFYSKTKAMVEELLKNYENV---CTLRVRMPISSDLS----N------PRNFITKITRYEKVVNIPNSMTILDE  199 (298)
T ss_pred             CCCCCCCchHHHHHHHHHHHHHhhcc---EEeeecccCCcccc----c------HHHHHHHHHcCCCeeEcCCCCEEHHH
Confidence            01123467999999999999876532   2444421 111100    0      001111111111  112234778999


Q ss_pred             HHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          235 VADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       235 va~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++++++.++...   .+| .+++.+|..
T Consensus       200 ~v~al~~~l~~~---~~g-~yNigs~~~  223 (298)
T PLN02778        200 LLPISIEMAKRN---LTG-IYNFTNPGV  223 (298)
T ss_pred             HHHHHHHHHhCC---CCC-eEEeCCCCc
Confidence            999999988532   234 888876643

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=99.47  E-value=2.6e-12  Score=108.02  Aligned_cols=197  Identities=14%  Similarity=0.100  Sum_probs=120.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC-ccEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ-LDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~-id~l   95 (264)
                      ++|||||||.+|++++++|.++|++|.++.|+.+....        ..+..+.+|+.|++++..+++.. +.+.. +|.+
T Consensus         1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~--------~~~~~~~~d~~d~~~l~~a~~~~-~~~~g~~d~v   71 (285)
T TIGR03649         1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG--------PNEKHVKFDWLDEDTWDNPFSSD-DGMEPEISAV   71 (285)
T ss_pred             CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC--------CCCccccccCCCHHHHHHHHhcc-cCcCCceeEE
Confidence            47999999999999999999999999999998764311        13456789999999999888643 22335 8999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      +++++....           ..            ...+.+++.+++.+ -.+||++||.....+.       ..+...+.
T Consensus        72 ~~~~~~~~~-----------~~------------~~~~~~i~aa~~~g-v~~~V~~Ss~~~~~~~-------~~~~~~~~  120 (285)
T TIGR03649        72 YLVAPPIPD-----------LA------------PPMIKFIDFARSKG-VRRFVLLSASIIEKGG-------PAMGQVHA  120 (285)
T ss_pred             EEeCCCCCC-----------hh------------HHHHHHHHHHHHcC-CCEEEEeeccccCCCC-------chHHHHHH
Confidence            998763211           00            01123445556655 5699999986543221       12322222


Q ss_pred             HHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccE
Q 041914          176 LVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD  254 (264)
Q Consensus       176 ~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~  254 (264)
                      +.       .. .++....+.|+++..++...............+.........+++++|+|+++..++...  ...|..
T Consensus       121 ~l-------~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~--~~~~~~  191 (285)
T TIGR03649       121 HL-------DSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDK--VAPNTD  191 (285)
T ss_pred             HH-------HhccCCCEEEEeccHHhhhhcccccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCC--CcCCCe
Confidence            22       22 389999999998875542211100000000111111111134789999999999988643  223566


Q ss_pred             EEecCeee
Q 041914          255 LVVDGGFL  262 (264)
Q Consensus       255 i~~dgG~~  262 (264)
                      +++.|+-.
T Consensus       192 ~~l~g~~~  199 (285)
T TIGR03649       192 YVVLGPEL  199 (285)
T ss_pred             EEeeCCcc
Confidence            66766543

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=99.43  E-value=4.4e-12  Score=104.54  Aligned_cols=159  Identities=17%  Similarity=0.262  Sum_probs=99.8

Q ss_pred             EeCCCChhHHHHHHHHHHcCC--cEEEEecCchh--hHHHHHhhh------------CCCcEEEEEecCCCH------HH
Q 041914           20 ITGGASGIGETTARLFADHGA--RMIVIADIQDE--LGRQVATSI------------GVGKCHYVHCDVTNE------CQ   77 (264)
Q Consensus        20 ItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~--~~~~~~~~~------------~~~~~~~~~~D~s~~------~~   77 (264)
                      ||||||.||.++..+|++.+.  +|+++.|....  ..+.+.+.+            ...+++++..|++++      +.
T Consensus         1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~   80 (249)
T PF07993_consen    1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED   80 (249)
T ss_dssp             EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred             CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence            799999999999999999987  78888887643  223332221            135899999999985      33


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS  157 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~  157 (264)
                      .+.+.+       .+|++||||+......         .+++..++|+.|+.++++.+.    +.+ ..+++++||....
T Consensus        81 ~~~L~~-------~v~~IiH~Aa~v~~~~---------~~~~~~~~NV~gt~~ll~la~----~~~-~~~~~~iSTa~v~  139 (249)
T PF07993_consen   81 YQELAE-------EVDVIIHCAASVNFNA---------PYSELRAVNVDGTRNLLRLAA----QGK-RKRFHYISTAYVA  139 (249)
T ss_dssp             HHHHHH-------H--EEEE--SS-SBS----------S--EEHHHHHHHHHHHHHHHT----SSS----EEEEEEGGGT
T ss_pred             hhcccc-------ccceeeecchhhhhcc---------cchhhhhhHHHHHHHHHHHHH----hcc-CcceEEecccccc
Confidence            444433       5899999999765431         355678899999999888774    233 3499999993221


Q ss_pred             --CC------------------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc
Q 041914          158 --CG------------------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       158 --~~------------------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                        ..                  ......|..||+.-+.+.+..+.+   .|+.+..+.||.+..+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~---~g~p~~I~Rp~~i~g~  201 (249)
T PF07993_consen  140 GSRPGTIEEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQR---HGLPVTIYRPGIIVGD  201 (249)
T ss_dssp             TS-TTT--SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHH---H---EEEEEE-EEE-S
T ss_pred             CCCCCcccccccccccccchhhccCCccHHHHHHHHHHHHHHHHhc---CCceEEEEecCccccc
Confidence              11                  133457999999999999988876   3789999999988773

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=99.42  E-value=5.9e-12  Score=103.36  Aligned_cols=126  Identities=23%  Similarity=0.219  Sum_probs=104.0

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      +||||++|-+|.++++.|. .+.+|+.+++.+                    +|++|.+.+.+++.+.     ++|++||
T Consensus         3 iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~--------------------~Ditd~~~v~~~i~~~-----~PDvVIn   56 (281)
T COG1091           3 ILITGANGQLGTELRRALP-GEFEVIATDRAE--------------------LDITDPDAVLEVIRET-----RPDVVIN   56 (281)
T ss_pred             EEEEcCCChHHHHHHHHhC-CCceEEeccCcc--------------------ccccChHHHHHHHHhh-----CCCEEEE
Confidence            8999999999999999999 778877777754                    7999999999999987     8999999


Q ss_pred             cCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCchh
Q 041914           98 NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTDY  166 (264)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~y  166 (264)
                      +|++....      ..+.+-+..+.+|..++.++.+++.    +.  ..++|++|+-..+.+           ..+...|
T Consensus        57 ~AAyt~vD------~aE~~~e~A~~vNa~~~~~lA~aa~----~~--ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY  124 (281)
T COG1091          57 AAAYTAVD------KAESEPELAFAVNATGAENLARAAA----EV--GARLVHISTDYVFDGEKGGPYKETDTPNPLNVY  124 (281)
T ss_pred             Cccccccc------cccCCHHHHHHhHHHHHHHHHHHHH----Hh--CCeEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence            99987654      2334578899999999999999873    32  468999998776533           3456789


Q ss_pred             hchHHHHHHHHHHHH
Q 041914          167 HMSKHAVIGLVRSAS  181 (264)
Q Consensus       167 ~~sK~al~~~~~~la  181 (264)
                      +.||.+-+..++...
T Consensus       125 G~sKl~GE~~v~~~~  139 (281)
T COG1091         125 GRSKLAGEEAVRAAG  139 (281)
T ss_pred             hHHHHHHHHHHHHhC
Confidence            999999999887664

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=99.41  E-value=7.4e-12  Score=106.30  Aligned_cols=225  Identities=16%  Similarity=0.075  Sum_probs=146.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.++|||||+|.+|++++++|.+.+  .++.++..... ......+..  ....+.++.+|+.|..++.+.++      
T Consensus         3 ~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~-~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~------   75 (361)
T KOG1430|consen    3 KKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPT-QSNLPAELTGFRSGRVTVILGDLLDANSISNAFQ------   75 (361)
T ss_pred             cCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCcc-ccccchhhhcccCCceeEEecchhhhhhhhhhcc------
Confidence            46899999999999999999999998  56455544432 111111111  24578999999999988888876      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----------  159 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----------  159 (264)
                       +. .+||+|+...+.      .-..+-+..+++|+.|+-+++.++    .+.+ -.++|++||.....+          
T Consensus        76 -~~-~Vvh~aa~~~~~------~~~~~~~~~~~vNV~gT~nvi~~c----~~~~-v~~lIYtSs~~Vvf~g~~~~n~~E~  142 (361)
T KOG1430|consen   76 -GA-VVVHCAASPVPD------FVENDRDLAMRVNVNGTLNVIEAC----KELG-VKRLIYTSSAYVVFGGEPIINGDES  142 (361)
T ss_pred             -Cc-eEEEeccccCcc------ccccchhhheeecchhHHHHHHHH----HHhC-CCEEEEecCceEEeCCeecccCCCC
Confidence             66 778887765443      222367889999999977777765    4544 569999999887532          


Q ss_pred             --CC--CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC-----CCCCCC
Q 041914          160 --GK--RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP-----LEGVVL  230 (264)
Q Consensus       160 --~~--~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~  230 (264)
                        .|  ....|+.||+--+.+++..+.   ..+....++.|-.|..|.-....... -+..........     ....+.
T Consensus       143 ~p~p~~~~d~Y~~sKa~aE~~Vl~an~---~~~l~T~aLR~~~IYGpgd~~~~~~i-~~~~~~g~~~f~~g~~~~~~~~~  218 (361)
T KOG1430|consen  143 LPYPLKHIDPYGESKALAEKLVLEANG---SDDLYTCALRPPGIYGPGDKRLLPKI-VEALKNGGFLFKIGDGENLNDFT  218 (361)
T ss_pred             CCCccccccccchHHHHHHHHHHHhcC---CCCeeEEEEccccccCCCCccccHHH-HHHHHccCceEEeeccccccceE
Confidence              22  235899999999998877664   34688999999888887554332111 111111110000     002233


Q ss_pred             ChHHHHHHH--HHH-hCCCCCCeeccEEEecCeee
Q 041914          231 RAGHVADAV--LFL-ACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       231 ~~edva~~~--~~l-~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ..+-|+.+.  ... +......++||.+.++.|.-
T Consensus       219 ~~~Nva~ahilA~~aL~~~~~~~~Gq~yfI~d~~p  253 (361)
T KOG1430|consen  219 YGENVAWAHILAARALLDKSPSVNGQFYFITDDTP  253 (361)
T ss_pred             EechhHHHHHHHHHHHHhcCCccCceEEEEeCCCc
Confidence            444454442  222 22267889999999987753

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=99.40  E-value=3.1e-12  Score=107.51  Aligned_cols=196  Identities=16%  Similarity=0.089  Sum_probs=122.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++||||++|-||.++.+.|.+.|+.++.+.|.                    .+|++|.+++.+++++.     ++|++|
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~--------------------~~dl~d~~~~~~~~~~~-----~pd~Vi   56 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRS--------------------DLDLTDPEAVAKLLEAF-----KPDVVI   56 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT--------------------CS-TTSHHHHHHHHHHH-------SEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch--------------------hcCCCCHHHHHHHHHHh-----CCCeEe
Confidence            68999999999999999999999997777654                    67999999999999877     699999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      |+|+.....      .-.++-+..+.+|+.++..+.+.+.    +.  +.++|++||...+.+           ..+...
T Consensus        57 n~aa~~~~~------~ce~~p~~a~~iN~~~~~~la~~~~----~~--~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~  124 (286)
T PF04321_consen   57 NCAAYTNVD------ACEKNPEEAYAINVDATKNLAEACK----ER--GARLIHISTDYVFDGDKGGPYTEDDPPNPLNV  124 (286)
T ss_dssp             E------HH------HHHHSHHHHHHHHTHHHHHHHHHHH----HC--T-EEEEEEEGGGS-SSTSSSB-TTS----SSH
T ss_pred             ccceeecHH------hhhhChhhhHHHhhHHHHHHHHHHH----Hc--CCcEEEeeccEEEcCCcccccccCCCCCCCCH
Confidence            999976432      2334567889999999999888873    32  469999999865432           234678


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC------CCCCCCCChHHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT------PLEGVVLRAGHVADAV  239 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~edva~~~  239 (264)
                      |+.+|...+..++...    +   ....+.++++..+-..    .....+.+.+....      ......+..+|+|+.+
T Consensus       125 YG~~K~~~E~~v~~~~----~---~~~IlR~~~~~g~~~~----~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i  193 (286)
T PF04321_consen  125 YGRSKLEGEQAVRAAC----P---NALILRTSWVYGPSGR----NFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVI  193 (286)
T ss_dssp             HHHHHHHHHHHHHHH-----S---SEEEEEE-SEESSSSS----SHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhc----C---CEEEEecceecccCCC----chhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHH
Confidence            9999999988887632    1   4556677777665111    11222222222111      1112345779999999


Q ss_pred             HHHhCCCCC-CeeccEEEecCe
Q 041914          240 LFLACRDSE-FVTGHDLVVDGG  260 (264)
Q Consensus       240 ~~l~s~~~~-~~~G~~i~~dgG  260 (264)
                      ..|+.+... .-...++.+.|.
T Consensus       194 ~~l~~~~~~~~~~~Giyh~~~~  215 (286)
T PF04321_consen  194 LELIEKNLSGASPWGIYHLSGP  215 (286)
T ss_dssp             HHHHHHHHH-GGG-EEEE---B
T ss_pred             HHHHHhcccccccceeEEEecC
Confidence            999854321 111335666554

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.40  E-value=1e-12  Score=105.96  Aligned_cols=218  Identities=16%  Similarity=0.117  Sum_probs=153.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH---HHh-hh-CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ---VAT-SI-GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~---~~~-~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +|++||||-+|-=|.-+++.|.++|+.|.-+.|+.......   +.+ -. ...+++.+.+|++|..++.++++++    
T Consensus         2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v----   77 (345)
T COG1089           2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEV----   77 (345)
T ss_pred             CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhc----
Confidence            69999999999999999999999999999998875432221   111 11 1235889999999999999999988    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------C
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------C  158 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------~  158 (264)
                       .+|-+.|.++.....      .+.+..+...+++..|+.+++.++.-+=  .. ..++...||..-+           .
T Consensus        78 -~PdEIYNLaAQS~V~------vSFe~P~~T~~~~~iGtlrlLEaiR~~~--~~-~~rfYQAStSE~fG~v~~~pq~E~T  147 (345)
T COG1089          78 -QPDEIYNLAAQSHVG------VSFEQPEYTADVDAIGTLRLLEAIRILG--EK-KTRFYQASTSELYGLVQEIPQKETT  147 (345)
T ss_pred             -Cchhheecccccccc------ccccCcceeeeechhHHHHHHHHHHHhC--Cc-ccEEEecccHHhhcCcccCccccCC
Confidence             799999999876554      4556677888999999999999875433  21 4688877776543           3


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHh---CcCCceEEEeeCCcccCcccccc----cCCChHHHHhhcCCCCCCCCCCCC
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQL---GVHGIRVNCVSPHGLATPLTCHA----YGMPADEVEKLFEPQTPLEGVVLR  231 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~---~~~~i~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~  231 (264)
                      |..+.++|+++|.....++..+...|   +-.||-.|.=+|.-=.|-.+++.    ...........+..+.-.++.+..
T Consensus       148 PFyPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~  227 (345)
T COG1089         148 PFYPRSPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGH  227 (345)
T ss_pred             CCCCCCHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccc
Confidence            66789999999999999999888776   34467666655532121111111    000011111223334444466788


Q ss_pred             hHHHHHHHHHHhCCC
Q 041914          232 AGHVADAVLFLACRD  246 (264)
Q Consensus       232 ~edva~~~~~l~s~~  246 (264)
                      ..|.+++.+-++.++
T Consensus       228 A~DYVe~mwlmLQq~  242 (345)
T COG1089         228 AKDYVEAMWLMLQQE  242 (345)
T ss_pred             hHHHHHHHHHHHccC
Confidence            889999998888654

>PRK08309 short chain dehydrogenase; Provisional

Probab=99.38  E-value=1.1e-10  Score=90.71  Aligned_cols=170  Identities=17%  Similarity=0.137  Sum_probs=112.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++||||+ |+|.++++.|+++|++|++++|+.++. +.+.... ....+.++++|++|.+++.++++.+.+.++++|++
T Consensus         2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~-~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l   79 (177)
T PRK08309          2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKL-ENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA   79 (177)
T ss_pred             EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHH-HHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence            68999998 777889999999999988888876543 3333322 22468889999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |+..=...+.                        .+.+.+...=.+.+ ..+++++-+..+..+                
T Consensus        80 v~~vh~~~~~------------------------~~~~~~~~~gv~~~-~~~~~h~~gs~~~~~----------------  118 (177)
T PRK08309         80 VAWIHSSAKD------------------------ALSVVCRELDGSSE-TYRLFHVLGSAASDP----------------  118 (177)
T ss_pred             EEeccccchh------------------------hHHHHHHHHccCCC-CceEEEEeCCcCCch----------------
Confidence            9776433221                        11222211111111 237887764444211                


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC-CCCCCeecc
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC-RDSEFVTGH  253 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s-~~~~~~~G~  253 (264)
                        +..+....+.+....-|..|++.+.-.                      .|.++-||+++.++.-+. +....+-|+
T Consensus       119 --~~~~~~~~~~~~~~~~i~lgf~~~~~~----------------------~rwlt~~ei~~gv~~~~~~~~~~~~~g~  173 (177)
T PRK08309        119 --RIPSEKIGPARCSYRRVILGFVLEDTY----------------------SRWLTHEEISDGVIKAIESDADEHVVGT  173 (177)
T ss_pred             --hhhhhhhhhcCCceEEEEEeEEEeCCc----------------------cccCchHHHHHHHHHHHhcCCCeEEEEE
Confidence              122233334456666778888865422                      677899999999998774 445566664

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.34  E-value=8.6e-11  Score=99.06  Aligned_cols=164  Identities=20%  Similarity=0.271  Sum_probs=119.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchh--hHHHHHhhh---------CCCcEEEEEecCCC------HHH
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQDE--LGRQVATSI---------GVGKCHYVHCDVTN------ECQ   77 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~D~s~------~~~   77 (264)
                      +++|+|||||.+|..+..+|..+ .++|+++.|.+.+  ..+.+....         ..+++..+..|++.      ...
T Consensus         1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~   80 (382)
T COG3320           1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT   80 (382)
T ss_pred             CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence            57999999999999999988876 5688888876652  222222222         22689999999983      344


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS  157 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~  157 (264)
                      .+.+.+       .+|.+|||++....-.         ...+....|+.|+..+++.+.    ..+ ...+.+|||++..
T Consensus        81 ~~~La~-------~vD~I~H~gA~Vn~v~---------pYs~L~~~NVlGT~evlrLa~----~gk-~Kp~~yVSsisv~  139 (382)
T COG3320          81 WQELAE-------NVDLIIHNAALVNHVF---------PYSELRGANVLGTAEVLRLAA----TGK-PKPLHYVSSISVG  139 (382)
T ss_pred             HHHHhh-------hcceEEecchhhcccC---------cHHHhcCcchHhHHHHHHHHh----cCC-CceeEEEeeeeec
Confidence            555554       5899999999876431         367788899999988888652    222 3468999998865


Q ss_pred             CC--------------------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccc
Q 041914          158 CG--------------------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLT  204 (264)
Q Consensus       158 ~~--------------------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  204 (264)
                      ..                    ......|+-||++.+.+++.....    |+++..+.||++-.+..
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r----GLpv~I~Rpg~I~gds~  202 (382)
T COG3320         140 ETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDR----GLPVTIFRPGYITGDSR  202 (382)
T ss_pred             cccccCCCccccccccccccccCccCCCcchhHHHHHHHHHHHhhc----CCCeEEEecCeeeccCc
Confidence            32                    123467999999999988766544    89999999999976643

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=99.33  E-value=3e-10  Score=114.50  Aligned_cols=224  Identities=17%  Similarity=0.135  Sum_probs=139.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC----CcEEEEecCchhh--HHHHHhhhC---------CCcEEEEEecCCCHHHH-
Q 041914           15 GKVAIITGGASGIGETTARLFADHG----ARMIVIADIQDEL--GRQVATSIG---------VGKCHYVHCDVTNECQV-   78 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g----~~v~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~D~s~~~~~-   78 (264)
                      .++++|||++|.+|.+++++|.+++    .+|+.+.|.....  .+.+.+...         ..++.++..|++++.-- 
T Consensus       971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443       971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred             CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence            5899999999999999999999987    6777777764322  112211110         13688999999854100 


Q ss_pred             -HHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 041914           79 -KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS  157 (264)
Q Consensus        79 -~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~  157 (264)
                       ....+++.   ..+|++||||+.....      .+   +......|+.++.++++.+.    +.+ ..+++++||....
T Consensus      1051 ~~~~~~~l~---~~~d~iiH~Aa~~~~~------~~---~~~~~~~nv~gt~~ll~~a~----~~~-~~~~v~vSS~~v~ 1113 (1389)
T TIGR03443      1051 SDEKWSDLT---NEVDVIIHNGALVHWV------YP---YSKLRDANVIGTINVLNLCA----EGK-AKQFSFVSSTSAL 1113 (1389)
T ss_pred             CHHHHHHHH---hcCCEEEECCcEecCc------cC---HHHHHHhHHHHHHHHHHHHH----hCC-CceEEEEeCeeec
Confidence             11122222   3689999999876422      12   34455679999999888764    233 4589999996543


Q ss_pred             CC----------------------------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC
Q 041914          158 CG----------------------------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG  209 (264)
Q Consensus       158 ~~----------------------------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~  209 (264)
                      ..                            ......|+.||.+.+.+++..+.    .|+.+..+.||.+..+.......
T Consensus      1114 ~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~~~g~~~ 1189 (1389)
T TIGR03443      1114 DTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK----RGLRGCIVRPGYVTGDSKTGATN 1189 (1389)
T ss_pred             CcccccchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh----CCCCEEEECCCccccCCCcCCCC
Confidence            10                            01234599999999998876533    48999999999997763221110


Q ss_pred             CChHHHHhhc-----CCCCC---CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          210 MPADEVEKLF-----EPQTP---LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       210 ~~~~~~~~~~-----~~~~~---~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                       ..+.+....     ....|   ....++.+++++++++.++........+..+.+.++
T Consensus      1190 -~~~~~~~~~~~~~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~ 1247 (1389)
T TIGR03443      1190 -TDDFLLRMLKGCIQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGH 1247 (1389)
T ss_pred             -chhHHHHHHHHHHHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCC
Confidence             111111111     01111   124577899999999998754322233456666655

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=99.32  E-value=6.3e-11  Score=99.64  Aligned_cols=210  Identities=11%  Similarity=-0.002  Sum_probs=116.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      +|||||+|.||.+++++|+++|++|+++.|+........       ...+  .|+.. .       ...+...++|+|||
T Consensus         1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~--~~~~~-~-------~~~~~~~~~D~Vvh   63 (292)
T TIGR01777         1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-------WEGY--KPWAP-L-------AESEALEGADAVIN   63 (292)
T ss_pred             CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-------ceee--ecccc-c-------chhhhcCCCCEEEE
Confidence            589999999999999999999999999998766432110       0011  12221 1       11223357999999


Q ss_pred             cCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCC-cEEEEecCCCCCCC-----------CCCCch
Q 041914           98 NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVR-GSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~-~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      +++.....    .+.+.+..+..+++|+.++..+++++.    +.+.. ..+++.|+......           ..+...
T Consensus        64 ~a~~~~~~----~~~~~~~~~~~~~~n~~~~~~l~~a~~----~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~  135 (292)
T TIGR01777        64 LAGEPIAD----KRWTEERKQEIRDSRIDTTRALVEAIA----AAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDF  135 (292)
T ss_pred             CCCCCccc----ccCCHHHHHHHHhcccHHHHHHHHHHH----hcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCCh
Confidence            99964321    123445667788999999888877764    33311 24555554321110           001111


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC----CCCCCCCCCCChHHHHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE----PQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~edva~~~~~  241 (264)
                      |+..+...+...    ..+...++.+..+.|+.+..+..... ...... .....    ........++.++|+++++..
T Consensus       136 ~~~~~~~~e~~~----~~~~~~~~~~~ilR~~~v~G~~~~~~-~~~~~~-~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~  209 (292)
T TIGR01777       136 LAELCRDWEEAA----QAAEDLGTRVVLLRTGIVLGPKGGAL-AKMLPP-FRLGLGGPLGSGRQWFSWIHIEDLVQLILF  209 (292)
T ss_pred             HHHHHHHHHHHh----hhchhcCCceEEEeeeeEECCCcchh-HHHHHH-HhcCcccccCCCCcccccEeHHHHHHHHHH
Confidence            222222222222    12334579999999999977632100 000000 00000    001111457899999999999


Q ss_pred             HhCCCCCCeeccEEEecCee
Q 041914          242 LACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ++....  ..| .+++.++.
T Consensus       210 ~l~~~~--~~g-~~~~~~~~  226 (292)
T TIGR01777       210 ALENAS--ISG-PVNATAPE  226 (292)
T ss_pred             HhcCcc--cCC-ceEecCCC
Confidence            985422  234 56665543

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=99.31  E-value=5e-11  Score=96.22  Aligned_cols=223  Identities=16%  Similarity=0.107  Sum_probs=153.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecC--chhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           13 LEGKVAIITGGASGIGETTARLFADH--GARMIVIADI--QDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~--~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +..+.+|||||.+.||...+..++..  ..+.+.+..-  ... .+.+.+.....+.+++..|+.+...+..++.+    
T Consensus         4 ~~~~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~----   78 (331)
T KOG0747|consen    4 YKEKNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLEPVRNSPNYKFVEGDIADADLVLYLFET----   78 (331)
T ss_pred             CccceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhhhhccCCCceEeeccccchHHHHhhhcc----
Confidence            44599999999999999999999987  4443333211  111 23333333345789999999999887776653    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                       ..+|.|+|.|+.....      .+..+--..+..|+.++..|++..+...+    -.++|++|+.....          
T Consensus        79 -~~id~vihfaa~t~vd------~s~~~~~~~~~nnil~t~~Lle~~~~sg~----i~~fvhvSTdeVYGds~~~~~~~E  147 (331)
T KOG0747|consen   79 -EEIDTVIHFAAQTHVD------RSFGDSFEFTKNNILSTHVLLEAVRVSGN----IRRFVHVSTDEVYGDSDEDAVVGE  147 (331)
T ss_pred             -CchhhhhhhHhhhhhh------hhcCchHHHhcCCchhhhhHHHHHHhccC----eeEEEEecccceecCccccccccc
Confidence             3799999999976543      22223455678899999999998765442    45899999877542          


Q ss_pred             --CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhc--CCCCC------CCCC
Q 041914          159 --GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF--EPQTP------LEGV  228 (264)
Q Consensus       159 --~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--~~~~~------~~~~  228 (264)
                        ...+..+|+++|+|.+++.+++...|   |+.+..+.-+.|..|.....  ...+.+....  ....|      ..+.
T Consensus       148 ~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~q~~~--klipkFi~l~~~~~~~~i~g~g~~~rs  222 (331)
T KOG0747|consen  148 ASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPNQYPE--KLIPKFIKLAMRGKEYPIHGDGLQTRS  222 (331)
T ss_pred             cccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCCcChH--HHhHHHHHHHHhCCCcceecCccccee
Confidence              23456789999999999999998886   78898898888888854322  1122111111  11111      1245


Q ss_pred             CCChHHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       229 ~~~~edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      .+.+||+++++-..+-+   .-.|+++++.-
T Consensus       223 ~l~veD~~ea~~~v~~K---g~~geIYNIgt  250 (331)
T KOG0747|consen  223 YLYVEDVSEAFKAVLEK---GELGEIYNIGT  250 (331)
T ss_pred             eEeHHHHHHHHHHHHhc---CCccceeeccC
Confidence            77899999998888754   23688888753

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.30  E-value=5.3e-11  Score=106.46  Aligned_cols=160  Identities=17%  Similarity=0.204  Sum_probs=115.4

Q ss_pred             CcEEE----EeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           15 GKVAI----ITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        15 ~k~vl----ItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      |..+|    |+||++|+|.++++.|...|++|+...+...+.                                ......
T Consensus        34 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~--------------------------------~~~~~~   81 (450)
T PRK08261         34 GQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTW--------------------------------AAGWGD   81 (450)
T ss_pred             CCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCcccccc--------------------------------ccCcCC
Confidence            44556    888899999999999999999977655433310                                000112


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      +++.+|+-+...         .+.++        +.+.+.+++..++.|..   .|+||+++|......   ...|+++|
T Consensus        82 ~~~~~~~d~~~~---------~~~~~--------l~~~~~~~~~~l~~l~~---~griv~i~s~~~~~~---~~~~~~ak  138 (450)
T PRK08261         82 RFGALVFDATGI---------TDPAD--------LKALYEFFHPVLRSLAP---CGRVVVLGRPPEAAA---DPAAAAAQ  138 (450)
T ss_pred             cccEEEEECCCC---------CCHHH--------HHHHHHHHHHHHHhccC---CCEEEEEccccccCC---chHHHHHH
Confidence            455554332211         11222        22445677788888864   579999999877533   34699999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +++.+|+|+++.|+ +.+|+++.|.|++                               ..+++++..+.|++++...++
T Consensus       139 aal~gl~rsla~E~-~~gi~v~~i~~~~-------------------------------~~~~~~~~~~~~l~s~~~a~~  186 (450)
T PRK08261        139 RALEGFTRSLGKEL-RRGATAQLVYVAP-------------------------------GAEAGLESTLRFFLSPRSAYV  186 (450)
T ss_pred             HHHHHHHHHHHHHh-hcCCEEEEEecCC-------------------------------CCHHHHHHHHHHhcCCccCCc
Confidence            99999999999999 7799999998863                               145678889999999888999


Q ss_pred             eccEEEecCee
Q 041914          251 TGHDLVVDGGF  261 (264)
Q Consensus       251 ~G~~i~~dgG~  261 (264)
                      +|+.+.++++.
T Consensus       187 ~g~~i~~~~~~  197 (450)
T PRK08261        187 SGQVVRVGAAD  197 (450)
T ss_pred             cCcEEEecCCc
Confidence            99999988875

>PRK12320 hypothetical protein; Provisional

Probab=99.30  E-value=2e-10  Score=106.02  Aligned_cols=189  Identities=15%  Similarity=0.152  Sum_probs=119.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|.||.+++++|.++|++|+++.+.....        ....+.++.+|+.+.. +.+++       .++|++|
T Consensus         2 kILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~--------~~~~ve~v~~Dl~d~~-l~~al-------~~~D~VI   65 (699)
T PRK12320          2 QILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDA--------LDPRVDYVCASLRNPV-LQELA-------GEADAVI   65 (699)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhc--------ccCCceEEEccCCCHH-HHHHh-------cCCCEEE
Confidence            599999999999999999999999988888754321        1125778999999873 33333       2689999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      |+++.....              ...+|+.++.++++++    ++.+  .++|++||..+.   +  ..|.    ..+.+
T Consensus        66 HLAa~~~~~--------------~~~vNv~Gt~nLleAA----~~~G--vRiV~~SS~~G~---~--~~~~----~aE~l  116 (699)
T PRK12320         66 HLAPVDTSA--------------PGGVGITGLAHVANAA----ARAG--ARLLFVSQAAGR---P--ELYR----QAETL  116 (699)
T ss_pred             EcCccCccc--------------hhhHHHHHHHHHHHHH----HHcC--CeEEEEECCCCC---C--cccc----HHHHH
Confidence            999863211              1147888888888876    3444  379999987432   1  1132    12222


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEE
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV  256 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~  256 (264)
                      .    ..   .++.+..+.|..+..+.....................|.  .++.++|++++++.++...   .+| +|+
T Consensus       117 l----~~---~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI--~vIyVdDvv~alv~al~~~---~~G-iyN  183 (699)
T PRK12320        117 V----ST---GWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPI--RVLHLDDLVRFLVLALNTD---RNG-VVD  183 (699)
T ss_pred             H----Hh---cCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCce--EEEEHHHHHHHHHHHHhCC---CCC-EEE
Confidence            2    22   347788888888877632110000111111111112222  2469999999998888542   245 899


Q ss_pred             ecCeeec
Q 041914          257 VDGGFLI  263 (264)
Q Consensus       257 ~dgG~~~  263 (264)
                      +.||..+
T Consensus       184 IG~~~~~  190 (699)
T PRK12320        184 LATPDTT  190 (699)
T ss_pred             EeCCCee
Confidence            9888654

>PLN02503 fatty acyl-CoA reductase 2

Probab=99.30  E-value=2.2e-10  Score=104.48  Aligned_cols=125  Identities=15%  Similarity=0.193  Sum_probs=87.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC---cEEEEecCchh--hHHHHH-hh------------hC-------CCcEE
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA---RMIVIADIQDE--LGRQVA-TS------------IG-------VGKCH   66 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~---~v~~~~~~~~~--~~~~~~-~~------------~~-------~~~~~   66 (264)
                      .+++|++|||||+|.||..+++.|++.+.   +|.++.|....  ..+.+. +.            ..       ..++.
T Consensus       116 f~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~  195 (605)
T PLN02503        116 FLRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV  195 (605)
T ss_pred             hhcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence            36899999999999999999999998764   45667764321  222221 11            01       24688


Q ss_pred             EEEecCCCH------HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 041914           67 YVHCDVTNE------CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMV  140 (264)
Q Consensus        67 ~~~~D~s~~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~  140 (264)
                      ++..|++++      +..+.+.+       .+|++||+|+.....         +..+..+++|+.++.++++.+...  
T Consensus       196 ~v~GDl~d~~LGLs~~~~~~L~~-------~vDiVIH~AA~v~f~---------~~~~~a~~vNV~GT~nLLelA~~~--  257 (605)
T PLN02503        196 PVVGNVCESNLGLEPDLADEIAK-------EVDVIINSAANTTFD---------ERYDVAIDINTRGPCHLMSFAKKC--  257 (605)
T ss_pred             EEEeeCCCcccCCCHHHHHHHHh-------cCCEEEECccccccc---------cCHHHHHHHHHHHHHHHHHHHHHc--
Confidence            999999986      23333332       689999999876421         246788999999999998877432  


Q ss_pred             cCCCCcEEEEecCCCC
Q 041914          141 EGGVRGSIVCTASVAG  156 (264)
Q Consensus       141 ~~~~~~~iv~iss~~~  156 (264)
                       .. ..++|++||...
T Consensus       258 -~~-lk~fV~vSTayV  271 (605)
T PLN02503        258 -KK-LKLFLQVSTAYV  271 (605)
T ss_pred             -CC-CCeEEEccCcee
Confidence             11 347888888754

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=99.28  E-value=1.5e-11  Score=99.50  Aligned_cols=103  Identities=12%  Similarity=0.120  Sum_probs=78.7

Q ss_pred             cEEEEeC-CCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITG-GASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItG-as~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+=.||. ++||||+++|++|+++|++|+++++...     +.    .  .....+|+++.+++.++++.+.+.++++|+
T Consensus        15 ~VR~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-----l~----~--~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDi   83 (227)
T TIGR02114        15 SVRSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-----LK----P--EPHPNLSIREIETTKDLLITLKELVQEHDI   83 (227)
T ss_pred             CceeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-----cc----c--ccCCcceeecHHHHHHHHHHHHHHcCCCCE
Confidence            4445665 4789999999999999999888765211     10    0  012458999999999999999999999999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH  134 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  134 (264)
                      ||||||+....  ++.+.+.++|++++..   +.+.+.+.
T Consensus        84 LVnnAgv~d~~--~~~~~s~e~~~~~~~~---~~~~~~~~  118 (227)
T TIGR02114        84 LIHSMAVSDYT--PVYMTDLEQVQASDNL---NEFLSKQN  118 (227)
T ss_pred             EEECCEecccc--chhhCCHHHHhhhcch---hhhhcccc
Confidence            99999986543  7888999999988554   55565553

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=99.27  E-value=5.7e-10  Score=104.57  Aligned_cols=141  Identities=17%  Similarity=0.091  Sum_probs=98.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+++|||||+|.||+++++.|.++|++|.+                       ...|++|.+.+...+.+.     ++|+
T Consensus       380 ~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~-----------------------~~~~l~d~~~v~~~i~~~-----~pd~  431 (668)
T PLN02260        380 SLKFLIYGRTGWIGGLLGKLCEKQGIAYEY-----------------------GKGRLEDRSSLLADIRNV-----KPTH  431 (668)
T ss_pred             CceEEEECCCchHHHHHHHHHHhCCCeEEe-----------------------eccccccHHHHHHHHHhh-----CCCE
Confidence            458999999999999999999999987521                       123678888777776654     6899


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------------  157 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------------  157 (264)
                      |||+|+.....   -.+...++-++.+++|+.++.++++++..    .+  .+++++||...+                 
T Consensus       432 Vih~Aa~~~~~---~~~~~~~~~~~~~~~N~~gt~~l~~a~~~----~g--~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~  502 (668)
T PLN02260        432 VFNAAGVTGRP---NVDWCESHKVETIRANVVGTLTLADVCRE----NG--LLMMNFATGCIFEYDAKHPEGSGIGFKEE  502 (668)
T ss_pred             EEECCcccCCC---CCChHHhCHHHHHHHHhHHHHHHHHHHHH----cC--CeEEEEcccceecCCcccccccCCCCCcC
Confidence            99999976432   11233445678899999999999998853    23  245556553311                 


Q ss_pred             -CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEee
Q 041914          158 -CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS  195 (264)
Q Consensus       158 -~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~  195 (264)
                       .+.+....|+.||.+.+.+++.+...   ..+|+..+.
T Consensus       503 ~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~r~~~~~  538 (668)
T PLN02260        503 DKPNFTGSFYSKTKAMVEELLREYDNV---CTLRVRMPI  538 (668)
T ss_pred             CCCCCCCChhhHHHHHHHHHHHhhhhh---eEEEEEEec
Confidence             01123478999999999999876422   346666554

>PLN00016 RNA-binding protein; Provisional

Probab=99.25  E-value=5.4e-10  Score=97.72  Aligned_cols=201  Identities=14%  Similarity=0.108  Sum_probs=123.0

Q ss_pred             CCCcEEEEe----CCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH-------HHhhhCCCcEEEEEecCCCHHHHHHH
Q 041914           13 LEGKVAIIT----GGASGIGETTARLFADHGARMIVIADIQDELGRQ-------VATSIGVGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        13 l~~k~vlIt----Gas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~D~s~~~~~~~~   81 (264)
                      ...++||||    ||+|.||.+++++|.++|++|+++.|........       ..+ +....+.++.+|+.|   +..+
T Consensus        50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d---~~~~  125 (378)
T PLN00016         50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSE-LSSAGVKTVWGDPAD---VKSK  125 (378)
T ss_pred             cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhH-hhhcCceEEEecHHH---HHhh
Confidence            345789999    9999999999999999999999999876542111       111 111247788888876   2222


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      +.     ..++|++||+++..           .           .+    ++.++..+++.+ -.++|++||........
T Consensus       126 ~~-----~~~~d~Vi~~~~~~-----------~-----------~~----~~~ll~aa~~~g-vkr~V~~SS~~vyg~~~  173 (378)
T PLN00016        126 VA-----GAGFDVVYDNNGKD-----------L-----------DE----VEPVADWAKSPG-LKQFLFCSSAGVYKKSD  173 (378)
T ss_pred             hc-----cCCccEEEeCCCCC-----------H-----------HH----HHHHHHHHHHcC-CCEEEEEccHhhcCCCC
Confidence            21     13689999986520           0           11    233444455555 46899999986543211


Q ss_pred             --C------CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC--C--CC----
Q 041914          162 --R------RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ--T--PL----  225 (264)
Q Consensus       162 --~------~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~--~--~~----  225 (264)
                        +      ...+. +|...+.+.+       ..++.+..+.|+.+..+.....   ............  .  +.    
T Consensus       174 ~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp~~vyG~~~~~~---~~~~~~~~~~~~~~i~~~g~g~~  242 (378)
T PLN00016        174 EPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRPQYIYGPGNNKD---CEEWFFDRLVRGRPVPIPGSGIQ  242 (378)
T ss_pred             CCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEeceeEECCCCCCc---hHHHHHHHHHcCCceeecCCCCe
Confidence              0      11122 6877776543       2478999999999987743210   011111111111  1  11    


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ...++.++|++++++.++...  ...|+.+++.++..
T Consensus       243 ~~~~i~v~Dva~ai~~~l~~~--~~~~~~yni~~~~~  277 (378)
T PLN00016        243 LTQLGHVKDLASMFALVVGNP--KAAGQIFNIVSDRA  277 (378)
T ss_pred             eeceecHHHHHHHHHHHhcCc--cccCCEEEecCCCc
Confidence            123678999999999988542  34578899987653

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=99.19  E-value=4.9e-10  Score=90.55  Aligned_cols=206  Identities=13%  Similarity=0.115  Sum_probs=119.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      ++||||||-||++++.+|.+.|..|.+++|+..+....+         +...-   ..+.    +.+...  ..+|++||
T Consensus         1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~---------~~~v~---~~~~----~~~~~~--~~~DavIN   62 (297)
T COG1090           1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNL---------HPNVT---LWEG----LADALT--LGIDAVIN   62 (297)
T ss_pred             CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhc---------Ccccc---ccch----hhhccc--CCCCEEEE
Confidence            589999999999999999999999999999987764432         11100   1111    111111  16999999


Q ss_pred             cCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch----HHHH
Q 041914           98 NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS----KHAV  173 (264)
Q Consensus        98 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s----K~al  173 (264)
                      .||..-... .   .+.+.=+..    ..|-+..++.+.....+...++.+.+-+|..++.+......|.-.    .-.+
T Consensus        63 LAG~~I~~r-r---Wt~~~K~~i----~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl  134 (297)
T COG1090          63 LAGEPIAER-R---WTEKQKEEI----RQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL  134 (297)
T ss_pred             CCCCccccc-c---CCHHHHHHH----HHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence            999754331 1   233333333    346677788888877754434555555566666554333333322    2344


Q ss_pred             HHHHHHHHHH---hCcCCceEEEeeCCcccCcccccccCC--ChHH-HHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          174 IGLVRSASVQ---LGVHGIRVNCVSPHGLATPLTCHAYGM--PADE-VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       174 ~~~~~~la~e---~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ..+|+.+-.+   ....|+||..+.-|.|-++---....+  ++.. ....+...... -.++..||+++++.|++.  .
T Consensus       135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~-~SWIhieD~v~~I~fll~--~  211 (297)
T COG1090         135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQW-FSWIHIEDLVNAILFLLE--N  211 (297)
T ss_pred             HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCce-eeeeeHHHHHHHHHHHHh--C
Confidence            4455544333   234589999999988866421111111  0000 00111111122 236678999999999994  4


Q ss_pred             CCeec
Q 041914          248 EFVTG  252 (264)
Q Consensus       248 ~~~~G  252 (264)
                      ..++|
T Consensus       212 ~~lsG  216 (297)
T COG1090         212 EQLSG  216 (297)
T ss_pred             cCCCC
Confidence            45556

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=99.19  E-value=7.5e-10  Score=89.57  Aligned_cols=208  Identities=17%  Similarity=0.123  Sum_probs=139.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ...+++++||||.|.||.++|..|..+|..|+++.-........+......-.+..+.-|+..+     ++.       .
T Consensus        24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~-------e   91 (350)
T KOG1429|consen   24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLK-------E   91 (350)
T ss_pred             CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHH-------H
Confidence            4678999999999999999999999999997777665554444443333334556666666644     444       5


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC--------------
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS--------------  157 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~--------------  157 (264)
                      +|.++|.|....+....      ..-.+.+..|+.++.+.+..+-+     - +.|+++.|+...+              
T Consensus        92 vD~IyhLAapasp~~y~------~npvktIktN~igtln~lglakr-----v-~aR~l~aSTseVYgdp~~hpq~e~ywg  159 (350)
T KOG1429|consen   92 VDQIYHLAAPASPPHYK------YNPVKTIKTNVIGTLNMLGLAKR-----V-GARFLLASTSEVYGDPLVHPQVETYWG  159 (350)
T ss_pred             hhhhhhhccCCCCcccc------cCccceeeecchhhHHHHHHHHH-----h-CceEEEeecccccCCcccCCCcccccc
Confidence            79999999887664211      12356788999999887776522     2 4688888887764              


Q ss_pred             --CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC--------CCCC
Q 041914          158 --CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT--------PLEG  227 (264)
Q Consensus       158 --~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~  227 (264)
                        .|..+...|...|...+.|+..+.++   .||.+....+..+..|...-.-+.....+........        ...+
T Consensus       160 ~vnpigpr~cydegKr~aE~L~~~y~k~---~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtR  236 (350)
T KOG1429|consen  160 NVNPIGPRSCYDEGKRVAETLCYAYHKQ---EGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTR  236 (350)
T ss_pred             ccCcCCchhhhhHHHHHHHHHHHHhhcc---cCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceE
Confidence              23445677999999999999888776   5888877777666665322111111111111111111        1226


Q ss_pred             CCCChHHHHHHHHHHhCCC
Q 041914          228 VVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~  246 (264)
                      .+..+.|+++.++.|+..+
T Consensus       237 SF~yvsD~Vegll~Lm~s~  255 (350)
T KOG1429|consen  237 SFQYVSDLVEGLLRLMESD  255 (350)
T ss_pred             EEEeHHHHHHHHHHHhcCC
Confidence            6888999999999998544

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=99.16  E-value=4e-10  Score=91.91  Aligned_cols=201  Identities=15%  Similarity=0.168  Sum_probs=119.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      |+|+||+|.+|+.+++.|.+.+++|.++.|.... ..+.++..    .+..+..|+.|.+++.++++       ++|.+|
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-------g~d~v~   69 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQAL----GAEVVEADYDDPESLVAALK-------GVDAVF   69 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHT----TTEEEES-TT-HHHHHHHHT-------TCSEEE
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcc----cceEeecccCCHHHHHHHHc-------CCceEE
Confidence            6899999999999999999999999999998743 22333222    34678999999999998887       899999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-C---CCCchhhchHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-G---KRRTDYHMSKHA  172 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-~---~~~~~y~~sK~a  172 (264)
                      ++.+...+.       .           ......+++++    ++.+ -.++|+ ||...... .   .+...+-..|..
T Consensus        70 ~~~~~~~~~-------~-----------~~~~~~li~Aa----~~ag-Vk~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~  125 (233)
T PF05368_consen   70 SVTPPSHPS-------E-----------LEQQKNLIDAA----KAAG-VKHFVP-SSFGADYDESSGSEPEIPHFDQKAE  125 (233)
T ss_dssp             EESSCSCCC-------H-----------HHHHHHHHHHH----HHHT--SEEEE-SEESSGTTTTTTSTTHHHHHHHHHH
T ss_pred             eecCcchhh-------h-----------hhhhhhHHHhh----hccc-cceEEE-EEecccccccccccccchhhhhhhh
Confidence            988765321       1           11222334443    3333 357775 44443332 1   112223345665


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-ChHHHHhhcCCCCCCC--CCC-CChHHHHHHHHHHhCCCCC
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-PADEVEKLFEPQTPLE--GVV-LRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~-~~~edva~~~~~l~s~~~~  248 (264)
                      ++.+.+.       .++....|.||.+........... ........+.-..+..  ... .+.+|+++.+..++.....
T Consensus       126 ie~~l~~-------~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~  198 (233)
T PF05368_consen  126 IEEYLRE-------SGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEK  198 (233)
T ss_dssp             HHHHHHH-------CTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGG
T ss_pred             hhhhhhh-------ccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHH
Confidence            5544433       389999999998765543211110 0000000000011111  233 3889999999999977555


Q ss_pred             CeeccEEEecCe
Q 041914          249 FVTGHDLVVDGG  260 (264)
Q Consensus       249 ~~~G~~i~~dgG  260 (264)
                      ..+|..+.+.|.
T Consensus       199 ~~~~~~~~~~~~  210 (233)
T PF05368_consen  199 HNNGKTIFLAGE  210 (233)
T ss_dssp             TTEEEEEEEGGG
T ss_pred             hcCCEEEEeCCC
Confidence            558888888663

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=98.89  E-value=2.3e-07  Score=82.58  Aligned_cols=242  Identities=14%  Similarity=0.048  Sum_probs=146.6

Q ss_pred             cccCCCcEEEEeCCC-ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-----CC-CcEEEEEecCCCHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGA-SGIGETTARLFADHGARMIVIADIQDELGRQVATSI-----GV-GKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        10 ~~~l~~k~vlItGas-~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~D~s~~~~~~~~~   82 (264)
                      .-.+.++++|||||+ +-||.+++.+|.+.|++|++.+++-.+...++-+.+     .. ..+.+++.+.++..+++.++
T Consensus       391 ~~~y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlI  470 (866)
T COG4982         391 GGTYGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALI  470 (866)
T ss_pred             CCCcccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHH
Confidence            345789999999986 679999999999999999988776554433333322     11 35777889999999999999


Q ss_pred             HHHHHhc--------------CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcE-
Q 041914           83 DSTVQNY--------------GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGS-  147 (264)
Q Consensus        83 ~~~~~~~--------------~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~-  147 (264)
                      +-|-...              -.+|.+|-.|++...+  .+.+... .-+-.+.+-+++...++-.+.++-..++...| 
T Consensus       471 ewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G--~l~~ags-raE~~~rilLw~V~Rliggl~~~~s~r~v~~R~  547 (866)
T COG4982         471 EWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSG--ELADAGS-RAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRL  547 (866)
T ss_pred             HHhccccccccCCcceecccccCcceeeecccCCccC--ccccCCc-hHHHHHHHHHHHHHHHHHHhhhhccccCcccce
Confidence            8885321              1478888888776554  5555533 12233444444444555444433333322233 


Q ss_pred             -EEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcC-CceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC
Q 041914          148 -IVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH-GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL  225 (264)
Q Consensus       148 -iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~-~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~  225 (264)
                       +|.-.|-. .--+.+...|+-+|++++.++..+..|-+-. .+.+..-.-|++......     ..++..-.-..+  .
T Consensus       548 hVVLPgSPN-rG~FGgDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGLM-----g~Ndiiv~aiEk--~  619 (866)
T COG4982         548 HVVLPGSPN-RGMFGGDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGLM-----GHNDIIVAAIEK--A  619 (866)
T ss_pred             EEEecCCCC-CCccCCCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeecccccc-----CCcchhHHHHHH--h
Confidence             33333221 1223566789999999999987776653211 244444456887755332     222221111111  1


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCe---eccEEEecCeee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFV---TGHDLVVDGGFL  262 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~---~G~~i~~dgG~~  262 (264)
                      .-+.-+.+|++..++.||+.+....   +--..+++||+.
T Consensus       620 GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~  659 (866)
T COG4982         620 GVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLG  659 (866)
T ss_pred             CceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCccc
Confidence            1455689999999999998653221   223456667764

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=98.85  E-value=1.7e-08  Score=88.07  Aligned_cols=82  Identities=24%  Similarity=0.288  Sum_probs=63.2

Q ss_pred             ccCCCcEEEEeCC----------------CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC
Q 041914           11 NKLEGKVAIITGG----------------ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN   74 (264)
Q Consensus        11 ~~l~~k~vlItGa----------------s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~   74 (264)
                      .+++||++|||||                ||++|.++|++|+++|++|+++.+... . .     ..   .....+|+++
T Consensus       184 ~~l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~-~-----~~---~~~~~~dv~~  253 (399)
T PRK05579        184 KDLAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-L-P-----TP---AGVKRIDVES  253 (399)
T ss_pred             cccCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-c-c-----CC---CCcEEEccCC
Confidence            4689999999999                555999999999999999988887642 1 1     01   1134679998


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcCCCCCCC
Q 041914           75 ECQVKALVDSTVQNYGQLDIMFSNAGILSSS  105 (264)
Q Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~  105 (264)
                      .+++.+.+.   +.++++|++|||||+....
T Consensus       254 ~~~~~~~v~---~~~~~~DilI~~Aav~d~~  281 (399)
T PRK05579        254 AQEMLDAVL---AALPQADIFIMAAAVADYR  281 (399)
T ss_pred             HHHHHHHHH---HhcCCCCEEEEcccccccc
Confidence            888776665   4578899999999986543

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.84  E-value=2.8e-07  Score=76.67  Aligned_cols=198  Identities=16%  Similarity=0.138  Sum_probs=122.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      .++|||||||.+|.+++++|.++|++|.++.|+.+......      ..+.+...|+.++.++...++       ++|.+
T Consensus         1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~------~~v~~~~~d~~~~~~l~~a~~-------G~~~~   67 (275)
T COG0702           1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA------GGVEVVLGDLRDPKSLVAGAK-------GVDGV   67 (275)
T ss_pred             CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc------CCcEEEEeccCCHhHHHHHhc-------cccEE
Confidence            36899999999999999999999999999999877654432      367889999999999998887       78999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      ++..+... .. .          ..............+...     .+ ...++.+|...+..  .....|..+|...+.
T Consensus        68 ~~i~~~~~-~~-~----------~~~~~~~~~~~~~a~~a~-----~~-~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~  127 (275)
T COG0702          68 LLISGLLD-GS-D----------AFRAVQVTAVVRAAEAAG-----AG-VKHGVSLSVLGADA--ASPSALARAKAAVEA  127 (275)
T ss_pred             EEEecccc-cc-c----------chhHHHHHHHHHHHHHhc-----CC-ceEEEEeccCCCCC--CCccHHHHHHHHHHH
Confidence            88887654 21 1          111122223333333321     11 34677777666543  344668888888776


Q ss_pred             HHHHHHHHhCcCCceEEEee-CCcccCcccccccCCChHHHHhhcCCCC--C-CCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          176 LVRSASVQLGVHGIRVNCVS-PHGLATPLTCHAYGMPADEVEKLFEPQT--P-LEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~-pG~v~t~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      ..+..       |+.-..+. ++++...... .    ............  + ..-..+..+|++..+...+....  ..
T Consensus       128 ~l~~s-------g~~~t~lr~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~--~~  193 (275)
T COG0702         128 ALRSS-------GIPYTTLRRAAFYLGAGAA-F----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA--TA  193 (275)
T ss_pred             HHHhc-------CCCeEEEecCeeeeccchh-H----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc--cc
Confidence            65443       55544444 3333322110 0    011111111111  1 11235688999999888876443  66


Q ss_pred             ccEEEecCe
Q 041914          252 GHDLVVDGG  260 (264)
Q Consensus       252 G~~i~~dgG  260 (264)
                      |+.+.+.|-
T Consensus       194 ~~~~~l~g~  202 (275)
T COG0702         194 GRTYELAGP  202 (275)
T ss_pred             CcEEEccCC
Confidence            777777664

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=98.72  E-value=5.2e-08  Score=91.88  Aligned_cols=163  Identities=18%  Similarity=0.245  Sum_probs=130.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch-hhH---HHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQD-ELG---RQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~-~~~---~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..|..+|+||-||.|.+++++|.++|++-++++.+.- +..   ..+...... ..+.+-..|++.......++++.. +
T Consensus      1767 peksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~-k 1845 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESN-K 1845 (2376)
T ss_pred             ccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhh-h
Confidence            4689999999999999999999999999766665543 221   122222222 356666778888888888888764 4


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      .+.+-.++|.|.+..+.  .+++.++++|+++-+-.+.++.++-+.-...-.+   -..+|..||+..-.+..+...|+.
T Consensus      1846 l~~vGGiFnLA~VLRD~--LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~---LdyFv~FSSvscGRGN~GQtNYG~ 1920 (2376)
T KOG1202|consen 1846 LGPVGGIFNLAAVLRDG--LIENQTPKNFKDVAKPKYSGTINLDRVSREICPE---LDYFVVFSSVSCGRGNAGQTNYGL 1920 (2376)
T ss_pred             cccccchhhHHHHHHhh--hhcccChhHHHhhhccceeeeeehhhhhhhhCcc---cceEEEEEeecccCCCCcccccch
Confidence            57899999999998776  8999999999999999999999988876655443   348899999999999999999999


Q ss_pred             hHHHHHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASV  182 (264)
Q Consensus       169 sK~al~~~~~~la~  182 (264)
                      ++++++-++..-..
T Consensus      1921 aNS~MERiceqRr~ 1934 (2376)
T KOG1202|consen 1921 ANSAMERICEQRRH 1934 (2376)
T ss_pred             hhHHHHHHHHHhhh
Confidence            99999999976543

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=98.67  E-value=1.7e-07  Score=76.01  Aligned_cols=100  Identities=13%  Similarity=0.119  Sum_probs=67.4

Q ss_pred             cEEEEeCCCC-hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGAS-GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~-giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+-.||+.|+ ++|.++|++|+++|++|+++.+......      .....+.++.++     +..++.+.+.+.++++|+
T Consensus        16 ~VR~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~------~~~~~v~~i~v~-----s~~~m~~~l~~~~~~~Di   84 (229)
T PRK06732         16 SVRGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP------EPHPNLSIIEIE-----NVDDLLETLEPLVKDHDV   84 (229)
T ss_pred             CceeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC------CCCCCeEEEEEe-----cHHHHHHHHHHHhcCCCE
Confidence            4667787555 5999999999999999998887542110      011245555542     223333444444467999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM  128 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~  128 (264)
                      +|||||+....  +....+.++|.+++++|....
T Consensus        85 vIh~AAvsd~~--~~~~~~~~~~~~~~~v~~~~~  116 (229)
T PRK06732         85 LIHSMAVSDYT--PVYMTDLEEVSASDNLNEFLT  116 (229)
T ss_pred             EEeCCccCCce--ehhhhhhhhhhhhhhhhhhhc
Confidence            99999987533  566678899999988877543

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=98.65  E-value=2.8e-08  Score=79.00  Aligned_cols=220  Identities=15%  Similarity=0.098  Sum_probs=136.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-------CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-------VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ..|++||||-+|-=|.-++.-|..+|++|.-+.|+.......-.+.+.       .+.......|++|..++.+++..+ 
T Consensus        27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~i-  105 (376)
T KOG1372|consen   27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTI-  105 (376)
T ss_pred             cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhcc-
Confidence            356999999999999999999999999999998887655433222221       146778889999999999999988 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC--C--------
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA--G--------  156 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~--~--------  156 (264)
                          +++-+.|.|+.....      .+.+--+-.-++...|++.++.++...-...  +-++--.|+..  +        
T Consensus       106 ----kPtEiYnLaAQSHVk------vSFdlpeYTAeVdavGtLRlLdAi~~c~l~~--~VrfYQAstSElyGkv~e~PQs  173 (376)
T KOG1372|consen  106 ----KPTEVYNLAAQSHVK------VSFDLPEYTAEVDAVGTLRLLDAIRACRLTE--KVRFYQASTSELYGKVQEIPQS  173 (376)
T ss_pred             ----CchhhhhhhhhcceE------EEeecccceeeccchhhhhHHHHHHhcCccc--ceeEEecccHhhcccccCCCcc
Confidence                577788888765543      1222223445667788888887765433222  22444443332  2        


Q ss_pred             -CCCCCCCchhhchHHHHHHHHHHHHHHh---CcCCceEEEeeCCcccCc----ccccccCCChHHHHhhcCCCCCCCCC
Q 041914          157 -SCGGKRRTDYHMSKHAVIGLVRSASVQL---GVHGIRVNCVSPHGLATP----LTCHAYGMPADEVEKLFEPQTPLEGV  228 (264)
Q Consensus       157 -~~~~~~~~~y~~sK~al~~~~~~la~e~---~~~~i~v~~v~pG~v~t~----~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (264)
                       ..|.-+.++|+++|.+--.++-.+...|   +-.||-.|.=+|.-=.+-    +++................+....+.
T Consensus       174 E~TPFyPRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RD  253 (376)
T KOG1372|consen  174 ETTPFYPRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRD  253 (376)
T ss_pred             cCCCCCCCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcc
Confidence             1345678999999988666655554443   445677777677321111    11111111111111112222223355


Q ss_pred             CCChHHHHHHHHHHhCCC
Q 041914          229 VLRAGHVADAVLFLACRD  246 (264)
Q Consensus       229 ~~~~edva~~~~~l~s~~  246 (264)
                      +.-..|-+++.+.++..+
T Consensus       254 WGhA~dYVEAMW~mLQ~d  271 (376)
T KOG1372|consen  254 WGHAGDYVEAMWLMLQQD  271 (376)
T ss_pred             cchhHHHHHHHHHHHhcC
Confidence            667778888888777544

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=98.63  E-value=2.8e-07  Score=74.97  Aligned_cols=214  Identities=16%  Similarity=0.165  Sum_probs=134.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..++.|-++-|.||||.+|+-++.+|++.|..|++-.|-++.....++-.-..+++.+++.|+.|+++++++++      
T Consensus        56 RsS~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk------  129 (391)
T KOG2865|consen   56 RSSVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVK------  129 (391)
T ss_pred             cccccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHH------
Confidence            34678999999999999999999999999999888888776655554443344789999999999999999998      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                       .-+++||..|--.+.. .+   +      .-++|+.++-.+.+.+    ++.+ --++|++|+..+.  ....+-|--+
T Consensus       130 -~sNVVINLIGrd~eTk-nf---~------f~Dvn~~~aerlAric----ke~G-VerfIhvS~Lgan--v~s~Sr~Lrs  191 (391)
T KOG2865|consen  130 -HSNVVINLIGRDYETK-NF---S------FEDVNVHIAERLARIC----KEAG-VERFIHVSCLGAN--VKSPSRMLRS  191 (391)
T ss_pred             -hCcEEEEeeccccccC-Cc---c------cccccchHHHHHHHHH----HhhC-hhheeehhhcccc--ccChHHHHHh
Confidence             5699999988644331 11   1      1235555555554443    4444 4589999988744  3344556666


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCC-------CCCCChHHHHHHHHHH
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE-------GVVLRAGHVADAVLFL  242 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~edva~~~~~l  242 (264)
                      |++-+--++..   +-    ....|.|.-+....-+  +-......++.+ ...|.-       +.-+.+-|||++++.-
T Consensus       192 K~~gE~aVrda---fP----eAtIirPa~iyG~eDr--fln~ya~~~rk~-~~~pL~~~GekT~K~PVyV~DVaa~IvnA  261 (391)
T KOG2865|consen  192 KAAGEEAVRDA---FP----EATIIRPADIYGTEDR--FLNYYASFWRKF-GFLPLIGKGEKTVKQPVYVVDVAAAIVNA  261 (391)
T ss_pred             hhhhHHHHHhh---CC----cceeechhhhcccchh--HHHHHHHHHHhc-CceeeecCCcceeeccEEEehHHHHHHHh
Confidence            77665544332   21    2234567555432110  000011111211 111110       1223567999999988


Q ss_pred             hCCCCCCeeccEEEecC
Q 041914          243 ACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dg  259 (264)
                      +.+.  .-.|.++..-|
T Consensus       262 vkDp--~s~Gktye~vG  276 (391)
T KOG2865|consen  262 VKDP--DSMGKTYEFVG  276 (391)
T ss_pred             ccCc--cccCceeeecC
Confidence            7544  45577776654

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=98.63  E-value=1.6e-07  Score=81.77  Aligned_cols=110  Identities=19%  Similarity=0.206  Sum_probs=74.5

Q ss_pred             ccCCCcEEEEeCC---------------CCh-hHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC
Q 041914           11 NKLEGKVAIITGG---------------ASG-IGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN   74 (264)
Q Consensus        11 ~~l~~k~vlItGa---------------s~g-iG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~   74 (264)
                      .+++||++|||||               |+| +|.+++++|..+|++|+++.++....       ...   ....+|+++
T Consensus       181 ~~~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~-------~~~---~~~~~~v~~  250 (390)
T TIGR00521       181 EDLEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL-------TPP---GVKSIKVST  250 (390)
T ss_pred             cccCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC-------CCC---CcEEEEecc
Confidence            3589999999999               666 99999999999999999888765421       111   225679999


Q ss_pred             HHHH-HHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHH---HHHHhhHHHHHHHHHHHHH
Q 041914           75 ECQV-KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAF---DRLFAINVRGMAACVKHAA  136 (264)
Q Consensus        75 ~~~~-~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~---~~~~~~n~~~~~~l~~~~l  136 (264)
                      .+++ +.++++.   ++++|++|+|||+....  +... ....+   .+.+.+|+...--+++.+.
T Consensus       251 ~~~~~~~~~~~~---~~~~D~~i~~Aavsd~~--~~~~-~~~Ki~~~~~~~~l~L~~~pdil~~l~  310 (390)
T TIGR00521       251 AEEMLEAALNEL---AKDFDIFISAAAVADFK--PKTV-FEGKIKKQGEELSLKLVKNPDIIAEVR  310 (390)
T ss_pred             HHHHHHHHHHhh---cccCCEEEEcccccccc--cccc-ccccccccCCceeEEEEeCcHHHHHHH
Confidence            8888 5555343   46799999999997653  2211 11111   1234566666655555553

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=98.63  E-value=4.9e-07  Score=79.40  Aligned_cols=169  Identities=14%  Similarity=0.265  Sum_probs=109.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC---cEEEEecCch--hhHHHHHhhh---------CC-----CcEEEEEecC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA---RMIVIADIQD--ELGRQVATSI---------GV-----GKCHYVHCDV   72 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~---~v~~~~~~~~--~~~~~~~~~~---------~~-----~~~~~~~~D~   72 (264)
                      .+++|+++||||+|.+|+-+...|.+.--   ++.++-|...  +..+.+..+.         +.     .++..+..|+
T Consensus         9 f~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi   88 (467)
T KOG1221|consen    9 FYKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDI   88 (467)
T ss_pred             HhCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccc
Confidence            47899999999999999999999988642   3333433221  1222222111         11     5788899998


Q ss_pred             CCH------HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCc
Q 041914           73 TNE------CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRG  146 (264)
Q Consensus        73 s~~------~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~  146 (264)
                      +++      .+.+.+.       ..+|++||+|+.....         |.++-.+.+|.+|+..+++-+....+    -.
T Consensus        89 ~~~~LGis~~D~~~l~-------~eV~ivih~AAtvrFd---------e~l~~al~iNt~Gt~~~l~lak~~~~----l~  148 (467)
T KOG1221|consen   89 SEPDLGISESDLRTLA-------DEVNIVIHSAATVRFD---------EPLDVALGINTRGTRNVLQLAKEMVK----LK  148 (467)
T ss_pred             cCcccCCChHHHHHHH-------hcCCEEEEeeeeeccc---------hhhhhhhhhhhHhHHHHHHHHHHhhh----hh
Confidence            864      2333232       3799999999976543         35788899999999999998765443    24


Q ss_pred             EEEEecCCCCCC----------C------------------------------CCCCchhhchHHHHHHHHHHHHHHhCc
Q 041914          147 SIVCTASVAGSC----------G------------------------------GKRRTDYHMSKHAVIGLVRSASVQLGV  186 (264)
Q Consensus       147 ~iv~iss~~~~~----------~------------------------------~~~~~~y~~sK~al~~~~~~la~e~~~  186 (264)
                      .++++|......          +                              ....-.|.-+|+-.+++...-+     
T Consensus       149 ~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~-----  223 (467)
T KOG1221|consen  149 ALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA-----  223 (467)
T ss_pred             eEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc-----
Confidence            788888776541          0                              1112336666666555554332     


Q ss_pred             CCceEEEeeCCcccCcccc
Q 041914          187 HGIRVNCVSPHGLATPLTC  205 (264)
Q Consensus       187 ~~i~v~~v~pG~v~t~~~~  205 (264)
                      .++.+..++|..+.+....
T Consensus       224 ~~lPivIiRPsiI~st~~E  242 (467)
T KOG1221|consen  224 ENLPLVIIRPSIITSTYKE  242 (467)
T ss_pred             cCCCeEEEcCCceeccccC
Confidence            3678888999877765443

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=98.60  E-value=3.6e-07  Score=76.84  Aligned_cols=85  Identities=21%  Similarity=0.260  Sum_probs=61.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCch--hhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQD--ELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .++++|+++|+|+ ||+|++++..|++.|++ |.++.|+.+  +..+.+.+.+..  ..+.+..+|+.+.+++...++  
T Consensus       122 ~~~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~--  198 (289)
T PRK12548        122 VDVKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA--  198 (289)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc--
Confidence            3578999999999 69999999999999997 777777752  233344443321  234566788887777665444  


Q ss_pred             HHhcCCccEEEEcCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILS  103 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~  103 (264)
                           ..|+||||..+..
T Consensus       199 -----~~DilINaTp~Gm  211 (289)
T PRK12548        199 -----SSDILVNATLVGM  211 (289)
T ss_pred             -----cCCEEEEeCCCCC
Confidence                 5699999987654

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=98.59  E-value=8.2e-06  Score=62.40  Aligned_cols=187  Identities=11%  Similarity=0.029  Sum_probs=120.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++.|.||||..|..|.++..++|..|..+.|+..+....       ..+...+.|+.|++++...+.       +.|++|
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~-------g~DaVI   67 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLA-------GHDAVI   67 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhc-------CCceEE
Confidence            578999999999999999999999999999998776332       145688999999999877666       789999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----------CCCCchh
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----------GKRRTDY  166 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----------~~~~~~y  166 (264)
                      ..-+...+..          -+.        .....+.++..++..+ ..|+++++...+..-          .-+-..|
T Consensus        68 sA~~~~~~~~----------~~~--------~~k~~~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~  128 (211)
T COG2910          68 SAFGAGASDN----------DEL--------HSKSIEALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYK  128 (211)
T ss_pred             EeccCCCCCh----------hHH--------HHHHHHHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchhHH
Confidence            9888764331          011        1112555666666656 679999988877532          1122223


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ..+++. .-+.+.|..+   ..+.-.-++|..+..|.-+.-.....   .+.+.....- ...++.+|.|-+++.-+.
T Consensus       129 ~~A~~~-ae~L~~Lr~~---~~l~WTfvSPaa~f~PGerTg~yrlg---gD~ll~n~~G-~SrIS~aDYAiA~lDe~E  198 (211)
T COG2910         129 PEALAQ-AEFLDSLRAE---KSLDWTFVSPAAFFEPGERTGNYRLG---GDQLLVNAKG-ESRISYADYAIAVLDELE  198 (211)
T ss_pred             HHHHHH-HHHHHHHhhc---cCcceEEeCcHHhcCCccccCceEec---cceEEEcCCC-ceeeeHHHHHHHHHHHHh
Confidence            333333 3333445444   34888888997766663221110011   1112222221 356788999998888763

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=98.57  E-value=6.7e-07  Score=70.83  Aligned_cols=83  Identities=22%  Similarity=0.385  Sum_probs=62.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++++++|+||+|++|+.+++.|++.|++|.++.|+.++. +.+.+.+. ........+|..+.+++.+.++      
T Consensus        24 ~~l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~------   96 (194)
T cd01078          24 KDLKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERA-QKAADSLRARFGEGVGAVETSDDAARAAAIK------   96 (194)
T ss_pred             cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh------
Confidence            478899999999999999999999999999988888776544 33433332 1123455678888888777664      


Q ss_pred             CCccEEEEcCCC
Q 041914           90 GQLDIMFSNAGI  101 (264)
Q Consensus        90 ~~id~lv~~ag~  101 (264)
                       +.|++|++.+.
T Consensus        97 -~~diVi~at~~  107 (194)
T cd01078          97 -GADVVFAAGAA  107 (194)
T ss_pred             -cCCEEEECCCC
Confidence             67988887654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=98.50  E-value=1.8e-06  Score=68.01  Aligned_cols=191  Identities=17%  Similarity=0.220  Sum_probs=115.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc---EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR---MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~---v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +++||||++|-.|.+|.+.+.+.|..   -++.+.                    -.+|+++.++.+.++++.     ++
T Consensus         2 ~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s--------------------kd~DLt~~a~t~~lF~~e-----kP   56 (315)
T KOG1431|consen    2 KKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS--------------------KDADLTNLADTRALFESE-----KP   56 (315)
T ss_pred             ceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc--------------------ccccccchHHHHHHHhcc-----CC
Confidence            68999999999999999999988762   111111                    246999999999999866     68


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC---------------
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS---------------  157 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~---------------  157 (264)
                      .++||.|+....-. .--..+.+-|...+++|-.    .++.+    .+.+ ...+++..|.+-+               
T Consensus        57 thVIhlAAmVGGlf-~N~~ynldF~r~Nl~indN----Vlhsa----~e~g-v~K~vsclStCIfPdkt~yPIdEtmvh~  126 (315)
T KOG1431|consen   57 THVIHLAAMVGGLF-HNNTYNLDFIRKNLQINDN----VLHSA----HEHG-VKKVVSCLSTCIFPDKTSYPIDETMVHN  126 (315)
T ss_pred             ceeeehHhhhcchh-hcCCCchHHHhhcceechh----HHHHH----HHhc-hhhhhhhcceeecCCCCCCCCCHHHhcc
Confidence            88999987543210 1112345556655444432    12222    1222 2244444444332               


Q ss_pred             -CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccc------ccc----------CCChHHHHhhcC
Q 041914          158 -CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTC------HAY----------GMPADEVEKLFE  220 (264)
Q Consensus       158 -~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~------~~~----------~~~~~~~~~~~~  220 (264)
                       .|.|....|+.+|..+.-..+.++.+++.   ...++.|-.+..|.-.      ...          .....+....+.
T Consensus       127 gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwG  203 (315)
T KOG1431|consen  127 GPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWG  203 (315)
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEec
Confidence             13455677999999988888999988754   3444445444333111      000          000111222334


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          221 PQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       221 ~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ...|. +.++..+|.|++.++++.+
T Consensus       204 sG~Pl-RqFiys~DLA~l~i~vlr~  227 (315)
T KOG1431|consen  204 SGSPL-RQFIYSDDLADLFIWVLRE  227 (315)
T ss_pred             CCChH-HHHhhHhHHHHHHHHHHHh
Confidence            45677 7899999999999999853

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=98.39  E-value=1.1e-05  Score=69.89  Aligned_cols=172  Identities=14%  Similarity=0.168  Sum_probs=102.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH-HHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE-CQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~   90 (264)
                      ..+-.+|+|+||+|++|+-+++.|.++|+.|-.+.|+.++....+...........+..|.... +....+++.+.   -
T Consensus        76 ~~~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~---~  152 (411)
T KOG1203|consen   76 SKKPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP---K  152 (411)
T ss_pred             CCCCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc---c
Confidence            3567899999999999999999999999998888887766544443111111233444444443 33333333221   1


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ...+++-++|......         +..--..+...+..++++++    +..+ -.++++++++.+.........+..  
T Consensus       153 ~~~~v~~~~ggrp~~e---------d~~~p~~VD~~g~knlvdA~----~~aG-vk~~vlv~si~~~~~~~~~~~~~~--  216 (411)
T KOG1203|consen  153 GVVIVIKGAGGRPEEE---------DIVTPEKVDYEGTKNLVDAC----KKAG-VKRVVLVGSIGGTKFNQPPNILLL--  216 (411)
T ss_pred             cceeEEecccCCCCcc---------cCCCcceecHHHHHHHHHHH----HHhC-CceEEEEEeecCcccCCCchhhhh--
Confidence            2456666665443321         12222334455666666666    3333 458999999998876655444442  


Q ss_pred             HHHHHHH-HHHHHHhCcCCceEEEeeCCcccCc
Q 041914          171 HAVIGLV-RSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       171 ~al~~~~-~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                      .+...-. +....+++..|+.-..|.||....+
T Consensus       217 ~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  217 NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             hhhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            1111111 2334455667899999999987654

>PLN00106 malate dehydrogenase

Probab=98.35  E-value=1e-05  Score=68.80  Aligned_cols=158  Identities=15%  Similarity=0.111  Sum_probs=96.0

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      .|..+.--..++|+|||++|.+|..++..|+..+.  +++++.... ...+ ..+. .+........++++.+++...+.
T Consensus         9 ~~~~~~~~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~-~~g~-a~Dl-~~~~~~~~i~~~~~~~d~~~~l~   85 (323)
T PLN00106          9 ACRAKGGAPGFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIAN-TPGV-AADV-SHINTPAQVRGFLGDDQLGDALK   85 (323)
T ss_pred             ccccccCCCCCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCC-CCee-Echh-hhCCcCceEEEEeCCCCHHHHcC
Confidence            35445445568999999999999999999997654  555555544 1111 1111 11111112224333333443333


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC----C--
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG----S--  157 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~----~--  157 (264)
                             +.|++|+.||....+        ...+.+.+..|+.....    +.+.+.+....+.++++|....    .  
T Consensus        86 -------~aDiVVitAG~~~~~--------g~~R~dll~~N~~i~~~----i~~~i~~~~p~aivivvSNPvD~~~~i~t  146 (323)
T PLN00106         86 -------GADLVIIPAGVPRKP--------GMTRDDLFNINAGIVKT----LCEAVAKHCPNALVNIISNPVNSTVPIAA  146 (323)
T ss_pred             -------CCCEEEEeCCCCCCC--------CCCHHHHHHHHHHHHHH----HHHHHHHHCCCeEEEEeCCCccccHHHHH
Confidence                   789999999985432        12467788888876444    4445566553445555554443    1  


Q ss_pred             ------CCCCCCchhhchHHHHHHHHHHHHHHhC
Q 041914          158 ------CGGKRRTDYHMSKHAVIGLVRSASVQLG  185 (264)
Q Consensus       158 ------~~~~~~~~y~~sK~al~~~~~~la~e~~  185 (264)
                            .+.|+...|+.++.-...|-..++.++.
T Consensus       147 ~~~~~~s~~p~~~viG~~~LDs~Rl~~~lA~~lg  180 (323)
T PLN00106        147 EVLKKAGVYDPKKLFGVTTLDVVRANTFVAEKKG  180 (323)
T ss_pred             HHHHHcCCCCcceEEEEecchHHHHHHHHHHHhC
Confidence                  2456677899998777778888888875

>PRK09620 hypothetical protein; Provisional

Probab=98.33  E-value=1.2e-06  Score=70.90  Aligned_cols=85  Identities=19%  Similarity=0.226  Sum_probs=52.6

Q ss_pred             CCCcEEEEeCCC----------------ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHH
Q 041914           13 LEGKVAIITGGA----------------SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC   76 (264)
Q Consensus        13 l~~k~vlItGas----------------~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~   76 (264)
                      |.||+||||+|.                |.+|.++|++|.++|++|+++.+..........   ....+..+..|    .
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~---~~~~~~~V~s~----~   73 (229)
T PRK09620          1 MKGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDIN---NQLELHPFEGI----I   73 (229)
T ss_pred             CCCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccC---CceeEEEEecH----H
Confidence            579999999886                999999999999999999888764321111000   01122333331    1


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSS  105 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~  105 (264)
                      ++...+.++.+. .++|++||+|++....
T Consensus        74 d~~~~l~~~~~~-~~~D~VIH~AAvsD~~  101 (229)
T PRK09620         74 DLQDKMKSIITH-EKVDAVIMAAAGSDWV  101 (229)
T ss_pred             HHHHHHHHHhcc-cCCCEEEECcccccee
Confidence            222223332221 2689999999986543

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=98.10  E-value=1.4e-05  Score=71.61  Aligned_cols=78  Identities=18%  Similarity=0.342  Sum_probs=56.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|+++|+|+++ +|.++|+.|+++|++|.++.+...+..+...+.+....+.++..|..+.            ..+.
T Consensus         2 ~~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------------~~~~   68 (450)
T PRK14106          2 ELKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGELGIELVLGEYPEE------------FLEG   68 (450)
T ss_pred             CcCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCEEEeCCcchh------------Hhhc
Confidence            57899999999888 9999999999999998888776533322222222222456777787751            1247


Q ss_pred             ccEEEEcCCCC
Q 041914           92 LDIMFSNAGIL  102 (264)
Q Consensus        92 id~lv~~ag~~  102 (264)
                      +|++|+++|+.
T Consensus        69 ~d~vv~~~g~~   79 (450)
T PRK14106         69 VDLVVVSPGVP   79 (450)
T ss_pred             CCEEEECCCCC
Confidence            89999999874

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=98.09  E-value=4.9e-05  Score=56.48  Aligned_cols=78  Identities=17%  Similarity=0.294  Sum_probs=54.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++++++|.|+ ||.|++++..|++.|++ +.++.|+.+ ..+.+.+......+.++..+  +.   ...+.       
T Consensus         9 ~l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~-ra~~l~~~~~~~~~~~~~~~--~~---~~~~~-------   74 (135)
T PF01488_consen    9 DLKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPE-RAEALAEEFGGVNIEAIPLE--DL---EEALQ-------   74 (135)
T ss_dssp             TGTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHH-HHHHHHHHHTGCSEEEEEGG--GH---CHHHH-------
T ss_pred             CcCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHH-HHHHHHHHcCccccceeeHH--HH---HHHHh-------
Confidence            689999999997 99999999999999999 555555544 44556555533345555443  22   22222       


Q ss_pred             CccEEEEcCCCCC
Q 041914           91 QLDIMFSNAGILS  103 (264)
Q Consensus        91 ~id~lv~~ag~~~  103 (264)
                      ..|++|++.+...
T Consensus        75 ~~DivI~aT~~~~   87 (135)
T PF01488_consen   75 EADIVINATPSGM   87 (135)
T ss_dssp             TESEEEE-SSTTS
T ss_pred             hCCeEEEecCCCC
Confidence            6899999988653

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism

Probab=98.01  E-value=2.8e-05  Score=60.80  Aligned_cols=80  Identities=21%  Similarity=0.238  Sum_probs=49.4

Q ss_pred             CCCcEEEEeCCC----------------ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHH
Q 041914           13 LEGKVAIITGGA----------------SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC   76 (264)
Q Consensus        13 l~~k~vlItGas----------------~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~   76 (264)
                      |+||+||||+|.                |.+|.++|+++..+|++|+++.+...-. .       ...+..+  ++.+.+
T Consensus         1 l~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~~~-~-------p~~~~~i--~v~sa~   70 (185)
T PF04127_consen    1 LKGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAARRGAEVTLIHGPSSLP-P-------PPGVKVI--RVESAE   70 (185)
T ss_dssp             -TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS------------TTEEEE--E-SSHH
T ss_pred             CCCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcccc-c-------cccceEE--Eecchh
Confidence            578999999875                8999999999999999999998874211 0       0133344  455555


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSS  105 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~  105 (264)
                      ++.+.+.   +.+..-|++|++|++....
T Consensus        71 em~~~~~---~~~~~~Di~I~aAAVsDf~   96 (185)
T PF04127_consen   71 EMLEAVK---ELLPSADIIIMAAAVSDFR   96 (185)
T ss_dssp             HHHHHHH---HHGGGGSEEEE-SB--SEE
T ss_pred             hhhhhhc---cccCcceeEEEecchhhee
Confidence            5544444   4344459999999987643

These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.

>KOG2774 consensus NAD dependent epimerase [General function prediction only]

Probab=97.97  E-value=6.6e-06  Score=65.32  Aligned_cols=220  Identities=17%  Similarity=0.229  Sum_probs=130.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++-+..++||||+-|-+|..+|+.|... |.+-+++++.-.+....    ...+  -++..|+-|...+++.+-.    
T Consensus        39 s~~~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V----~~~G--PyIy~DILD~K~L~eIVVn----  108 (366)
T KOG2774|consen   39 SQTQKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANV----TDVG--PYIYLDILDQKSLEEIVVN----  108 (366)
T ss_pred             cccCCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhh----cccC--CchhhhhhccccHHHhhcc----
Confidence            44556789999999999999999988765 77766666543332111    1112  3567788888777766532    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---------  159 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---------  159 (264)
                       .+||-|||..+.....       -+.+..-..++|+.|..++++.+..    .  +-++-.-|.+.++.|         
T Consensus       109 -~RIdWL~HfSALLSAv-------GE~NVpLA~~VNI~GvHNil~vAa~----~--kL~iFVPSTIGAFGPtSPRNPTPd  174 (366)
T KOG2774|consen  109 -KRIDWLVHFSALLSAV-------GETNVPLALQVNIRGVHNILQVAAK----H--KLKVFVPSTIGAFGPTSPRNPTPD  174 (366)
T ss_pred             -cccceeeeHHHHHHHh-------cccCCceeeeecchhhhHHHHHHHH----c--CeeEeecccccccCCCCCCCCCCC
Confidence             3899999988754321       1223444678999999988887632    2  223444444444432         


Q ss_pred             ---CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEe-eCCcccCcc----cccccCCChHHHHhhcC------CCCCC
Q 041914          160 ---GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV-SPHGLATPL----TCHAYGMPADEVEKLFE------PQTPL  225 (264)
Q Consensus       160 ---~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v-~pG~v~t~~----~~~~~~~~~~~~~~~~~------~~~~~  225 (264)
                         .++...|+.||--.+-+-+.+.-.+   |+...++ .||.+..+-    +..+   ....+.+...      ...|-
T Consensus       175 ltIQRPRTIYGVSKVHAEL~GEy~~hrF---g~dfr~~rfPg~is~~~pgggttdy---a~A~f~~Al~~gk~tCylrpd  248 (366)
T KOG2774|consen  175 LTIQRPRTIYGVSKVHAELLGEYFNHRF---GVDFRSMRFPGIISATKPGGGTTDY---AIAIFYDALQKGKHTCYLRPD  248 (366)
T ss_pred             eeeecCceeechhHHHHHHHHHHHHhhc---CccceecccCcccccCCCCCCcchh---HHHHHHHHHHcCCcccccCCC
Confidence               2356779999988777777665553   5655555 355554310    0000   0011111110      01111


Q ss_pred             C-CCCCChHHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          226 E-GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       226 ~-~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      . --++.-+|+-..++.++..+...+.-.+++++|
T Consensus       249 trlpmmy~~dc~~~~~~~~~a~~~~lkrr~ynvt~  283 (366)
T KOG2774|consen  249 TRLPMMYDTDCMASVIQLLAADSQSLKRRTYNVTG  283 (366)
T ss_pred             ccCceeehHHHHHHHHHHHhCCHHHhhhheeeece
Confidence            0 114567888888888776666666666777664

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.97  E-value=4.9e-05  Score=65.80  Aligned_cols=77  Identities=22%  Similarity=0.440  Sum_probs=60.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +.+||.|+ |++|+.+|..|+++| .+|.+.+|+.++..+ +.+... .++..+++|+.|.+.+.++++       +.|+
T Consensus         2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~-i~~~~~-~~v~~~~vD~~d~~al~~li~-------~~d~   71 (389)
T COG1748           2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCAR-IAELIG-GKVEALQVDAADVDALVALIK-------DFDL   71 (389)
T ss_pred             CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHH-HHhhcc-ccceeEEecccChHHHHHHHh-------cCCE
Confidence            57899999 999999999999999 777777776555433 333222 278899999999999998887       4599


Q ss_pred             EEEcCCCC
Q 041914           95 MFSNAGIL  102 (264)
Q Consensus        95 lv~~ag~~  102 (264)
                      +|++++..
T Consensus        72 VIn~~p~~   79 (389)
T COG1748          72 VINAAPPF   79 (389)
T ss_pred             EEEeCCch
Confidence            99998743

>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]

Probab=97.96  E-value=7.9e-05  Score=56.73  Aligned_cols=159  Identities=14%  Similarity=0.089  Sum_probs=103.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+.++.+.++|.||+|-.|..+.+++.+.+-  +|+++.|+.....+.      ...+.....|++..++.....+    
T Consensus        13 Df~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at------~k~v~q~~vDf~Kl~~~a~~~q----   82 (238)
T KOG4039|consen   13 DFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPAT------DKVVAQVEVDFSKLSQLATNEQ----   82 (238)
T ss_pred             HHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccc------cceeeeEEechHHHHHHHhhhc----
Confidence            4667889999999999999999999999854  588888885332221      1245556678776655544433    


Q ss_pred             hcCCccEEEEcCCCCCCCCC--CccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           88 NYGQLDIMFSNAGILSSSDQ--TVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                         .+|+++++-|.......  .+...+.+-           .+.+.+.    -++++ ...++.+||..+....  ...
T Consensus        83 ---g~dV~FcaLgTTRgkaGadgfykvDhDy-----------vl~~A~~----AKe~G-ck~fvLvSS~GAd~sS--rFl  141 (238)
T KOG4039|consen   83 ---GPDVLFCALGTTRGKAGADGFYKVDHDY-----------VLQLAQA----AKEKG-CKTFVLVSSAGADPSS--RFL  141 (238)
T ss_pred             ---CCceEEEeecccccccccCceEeechHH-----------HHHHHHH----HHhCC-CeEEEEEeccCCCccc--cee
Confidence               89999999886543211  122222111           1122222    24555 6789999998876543  456


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccc
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTC  205 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~  205 (264)
                      |--.|.-++.-+..|-.+      ++..+.||++..+...
T Consensus       142 Y~k~KGEvE~~v~eL~F~------~~~i~RPG~ll~~R~e  175 (238)
T KOG4039|consen  142 YMKMKGEVERDVIELDFK------HIIILRPGPLLGERTE  175 (238)
T ss_pred             eeeccchhhhhhhhcccc------EEEEecCcceeccccc
Confidence            778888777655444333      6778899999776544

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=97.91  E-value=7.1e-05  Score=65.74  Aligned_cols=76  Identities=21%  Similarity=0.364  Sum_probs=54.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           18 AIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |+|.|+ |.+|+.+++.|++++-  ++++..|+.++. +.+.+.....++.++++|+.|.+++.++++       +.|++
T Consensus         1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~-~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~-------~~dvV   71 (386)
T PF03435_consen    1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKA-ERLAEKLLGDRVEAVQVDVNDPESLAELLR-------GCDVV   71 (386)
T ss_dssp             EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHH-HHHHT--TTTTEEEEE--TTTHHHHHHHHT-------TSSEE
T ss_pred             CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHH-HHHHhhccccceeEEEEecCCHHHHHHHHh-------cCCEE
Confidence            689999 9999999999999975  555556655544 444443344589999999999999888877       66999


Q ss_pred             EEcCCCC
Q 041914           96 FSNAGIL  102 (264)
Q Consensus        96 v~~ag~~  102 (264)
                      ||++|..
T Consensus        72 in~~gp~   78 (386)
T PF03435_consen   72 INCAGPF   78 (386)
T ss_dssp             EE-SSGG
T ss_pred             EECCccc
Confidence            9999854

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK14982 acyl-ACP reductase; Provisional

Probab=97.89  E-value=6.8e-05  Score=64.04  Aligned_cols=75  Identities=17%  Similarity=0.330  Sum_probs=49.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHc-C-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADH-G-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~-g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++.+|+++||||+|.||..+|++|+++ | .+++++.|..+. ...+.++...       .|+.   ++.       +.
T Consensus       151 ~~l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~r-l~~La~el~~-------~~i~---~l~-------~~  212 (340)
T PRK14982        151 IDLSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQER-LQELQAELGG-------GKIL---SLE-------EA  212 (340)
T ss_pred             cCcCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHH-HHHHHHHhcc-------ccHH---hHH-------HH
Confidence            3689999999999999999999999864 5 466666665443 3434333221       1221   222       22


Q ss_pred             cCCccEEEEcCCCCC
Q 041914           89 YGQLDIMFSNAGILS  103 (264)
Q Consensus        89 ~~~id~lv~~ag~~~  103 (264)
                      ....|++||+++...
T Consensus       213 l~~aDiVv~~ts~~~  227 (340)
T PRK14982        213 LPEADIVVWVASMPK  227 (340)
T ss_pred             HccCCEEEECCcCCc
Confidence            347899999998753

>PTZ00325 malate dehydrogenase; Provisional

Probab=97.87  E-value=0.00057  Score=58.25  Aligned_cols=147  Identities=15%  Similarity=0.085  Sum_probs=86.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+++.|+|++|.+|..++..|+..+  .+++++.. .....+ ..+.... .......+.+|+.+..+.++       
T Consensus         6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di-~~~~g~-a~Dl~~~-~~~~~v~~~td~~~~~~~l~-------   75 (321)
T PTZ00325          6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDI-VGAPGV-AADLSHI-DTPAKVTGYADGELWEKALR-------   75 (321)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEec-CCCccc-ccchhhc-CcCceEEEecCCCchHHHhC-------
Confidence            456799999999999999999999654  45566655 221111 1111111 11223345555444333333       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-------------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-------------  157 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-------------  157 (264)
                      +.|++|+++|.....        .+.+.+.+..|+...-.+.++    |++.+ ..++|+++|....             
T Consensus        76 gaDvVVitaG~~~~~--------~~tR~dll~~N~~i~~~i~~~----i~~~~-~~~iviv~SNPvdv~~~~~~~~~~~~  142 (321)
T PTZ00325         76 GADLVLICAGVPRKP--------GMTRDDLFNTNAPIVRDLVAA----VASSA-PKAIVGIVSNPVNSTVPIAAETLKKA  142 (321)
T ss_pred             CCCEEEECCCCCCCC--------CCCHHHHHHHHHHHHHHHHHH----HHHHC-CCeEEEEecCcHHHHHHHHHhhhhhc
Confidence            789999999974321        124677888888765555554    55655 3466666665432             


Q ss_pred             CCCCCCchhhchHHHHHH--HHHHHHHHh
Q 041914          158 CGGKRRTDYHMSKHAVIG--LVRSASVQL  184 (264)
Q Consensus       158 ~~~~~~~~y~~sK~al~~--~~~~la~e~  184 (264)
                      .+.|+...|+.+-  |+.  |-..++..+
T Consensus       143 sg~p~~~viG~g~--LDs~R~r~~la~~l  169 (321)
T PTZ00325        143 GVYDPRKLFGVTT--LDVVRARKFVAEAL  169 (321)
T ss_pred             cCCChhheeechh--HHHHHHHHHHHHHh
Confidence            2345666788762  543  444566665

>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases

Probab=97.87  E-value=0.00018  Score=61.54  Aligned_cols=118  Identities=10%  Similarity=0.104  Sum_probs=66.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC-------CcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHG-------ARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g-------~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      -+++||||+|.+|.+++..|+..+       .+++++.+.... ..+.....+.+. ......|+....+..       +
T Consensus         3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~-~~~~~~~~~~~~~~~-------~   74 (325)
T cd01336           3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDC-AFPLLKSVVATTDPE-------E   74 (325)
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhc-cccccCCceecCCHH-------H
Confidence            368999999999999999999854       577777664421 111100000000 001111332222222       2


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTAS  153 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss  153 (264)
                      .+.+.|++||+||.....     ..+   -.+.++.|+.    +++.+.+.+.+.. ..+.++++|.
T Consensus        75 ~l~~aDiVI~tAG~~~~~-----~~~---R~~l~~~N~~----i~~~i~~~i~~~~~~~~iiivvsN  129 (325)
T cd01336          75 AFKDVDVAILVGAMPRKE-----GME---RKDLLKANVK----IFKEQGEALDKYAKKNVKVLVVGN  129 (325)
T ss_pred             HhCCCCEEEEeCCcCCCC-----CCC---HHHHHHHHHH----HHHHHHHHHHHhCCCCeEEEEecC
Confidence            234799999999985432     122   2556666664    4566666666653 3667777775

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=97.69  E-value=0.0012  Score=70.03  Aligned_cols=179  Identities=13%  Similarity=0.124  Sum_probs=115.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.++.++|++..++++.+++..|.++|+.|+++... ......... . ...+..+.+.--|..++..+++.+....+.
T Consensus      1752 ~~~~~~~~v~~d~~~~~~~L~~~L~~~G~~v~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1828 (2582)
T TIGR02813      1752 KQSGANALVIDDDGHNAGVLAEKLIAAGWQVAVVRSP-WVVSHSASP-L-ASAIASVTLGTIDDTSIEAVIKDIEEKTAQ 1828 (2582)
T ss_pred             cccCceeEEEcCCcchHHHHHHHHHhCCCeEEEeecc-ccccccccc-c-ccccccccccccchHHHHHHHHhhhccccc
Confidence            3568889999989999999999999999997666422 111000000 0 012334555566677888888888777788


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh-----
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY-----  166 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y-----  166 (264)
                      ++.+||..+.......+....   .+...-...+...|.+.|.+.+.+...+ .+.++.++...|..+.......     
T Consensus      1829 ~~g~i~l~~~~~~~~~~~~~~---~~~~~~~~~l~~~f~~ak~~~~~l~~~~-~~~~~~vsr~~G~~g~~~~~~~~~~~~ 1904 (2582)
T TIGR02813      1829 IDGFIHLQPQHKSVADKVDAI---ELPEAAKQSLMLAFLFAKLLNVKLATNA-RASFVTVSRIDGGFGYSNGDADSGTQQ 1904 (2582)
T ss_pred             cceEEEecccccccccccccc---ccchhhHHHHHHHHHHHHhhchhhccCC-CeEEEEEEecCCccccCCccccccccc
Confidence            999999887553211111111   1111122344556777777766666544 5788999988876665332221     


Q ss_pred             ---hchHHHHHHHHHHHHHHhCcCCceEEEeeCC
Q 041914          167 ---HMSKHAVIGLVRSASVQLGVHGIRVNCVSPH  197 (264)
Q Consensus       167 ---~~sK~al~~~~~~la~e~~~~~i~v~~v~pG  197 (264)
                         ....+++.+|+|+++.|+-...+|...+.|.
T Consensus      1905 ~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1905 VKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             cccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence               2357899999999999997666677777664

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=97.59  E-value=0.0014  Score=55.39  Aligned_cols=79  Identities=19%  Similarity=0.313  Sum_probs=51.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|++++|+|+++++|.++++.+...|++|+++.+..+.. +.+.+ ....    ..+|..+.+....+.+...  ...+|
T Consensus       144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~-~g~~----~~~~~~~~~~~~~~~~~~~--~~~~d  215 (325)
T cd08253         144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGA-ELVRQ-AGAD----AVFNYRAEDLADRILAATA--GQGVD  215 (325)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-cCCC----EEEeCCCcCHHHHHHHHcC--CCceE
Confidence            589999999999999999999999999987777765443 32322 2111    1234444443343332221  13699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      .++++++
T Consensus       216 ~vi~~~~  222 (325)
T cd08253         216 VIIEVLA  222 (325)
T ss_pred             EEEECCc
Confidence            9999876

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=97.57  E-value=0.00056  Score=57.29  Aligned_cols=79  Identities=18%  Similarity=0.318  Sum_probs=50.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++.+|+++|+|+ ||+|++++..|++.| .+|.++.|+.++. +.+.+......  .+..+.    +..       +..
T Consensus       119 ~~~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a-~~l~~~~~~~~--~~~~~~----~~~-------~~~  183 (278)
T PRK00258        119 VDLKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERA-EELAKLFGALG--KAELDL----ELQ-------EEL  183 (278)
T ss_pred             CCCCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHH-HHHHHHhhhcc--ceeecc----cch-------hcc
Confidence            3578999999997 999999999999999 6767777765544 44444332110  011111    011       112


Q ss_pred             CCccEEEEcCCCCCC
Q 041914           90 GQLDIMFSNAGILSS  104 (264)
Q Consensus        90 ~~id~lv~~ag~~~~  104 (264)
                      ...|++||+......
T Consensus       184 ~~~DivInaTp~g~~  198 (278)
T PRK00258        184 ADFDLIINATSAGMS  198 (278)
T ss_pred             ccCCEEEECCcCCCC
Confidence            368999999876543

>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent

Probab=97.46  E-value=0.0016  Score=55.74  Aligned_cols=115  Identities=12%  Similarity=0.083  Sum_probs=70.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHH--HH--HHH
Q 041914           17 VAIITGGASGIGETTARLFADHGA-------RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKA--LV--DST   85 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~--~~--~~~   85 (264)
                      ++.|+|++|.+|.+++..|+..+.       .++++.+.....           .......|+.|......  ..  ...
T Consensus         1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----------~a~g~~~Dl~d~~~~~~~~~~~~~~~   69 (324)
T TIGR01758         1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----------VLEGVVMELMDCAFPLLDGVVPTHDP   69 (324)
T ss_pred             CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----------ccceeEeehhcccchhcCceeccCCh
Confidence            478999999999999999998654       355555433321           12345556665541110  00  011


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-CCCcEEEEecCC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-GVRGSIVCTASV  154 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~~~~iv~iss~  154 (264)
                      .+.+.+.|++|+.||.....        .+++.+.+..|+.    +++.+.+.+.+. ...+.++++|.-
T Consensus        70 ~~~~~~aDiVVitAG~~~~~--------~~tr~~ll~~N~~----i~k~i~~~i~~~~~~~~iiivvsNP  127 (324)
T TIGR01758        70 AVAFTDVDVAILVGAFPRKE--------GMERRDLLSKNVK----IFKEQGRALDKLAKKDCKVLVVGNP  127 (324)
T ss_pred             HHHhCCCCEEEEcCCCCCCC--------CCcHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCCc
Confidence            23345799999999975321        1236677777764    566666677775 346778877743

This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=97.43  E-value=0.0018  Score=53.98  Aligned_cols=75  Identities=12%  Similarity=0.212  Sum_probs=49.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ..+|+++|+|+ ||+|++++..|++.|++|.++.|+.++. +.+.+.... +.......|     +.         ....
T Consensus       115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~-~~la~~~~~~~~~~~~~~~-----~~---------~~~~  178 (270)
T TIGR00507       115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKA-EELAERFQRYGEIQAFSMD-----EL---------PLHR  178 (270)
T ss_pred             ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHHhhcCceEEechh-----hh---------cccC
Confidence            46899999998 6999999999999999877777665544 344443322 222222111     10         1136


Q ss_pred             ccEEEEcCCCCC
Q 041914           92 LDIMFSNAGILS  103 (264)
Q Consensus        92 id~lv~~ag~~~  103 (264)
                      .|++|++.+...
T Consensus       179 ~DivInatp~gm  190 (270)
T TIGR00507       179 VDLIINATSAGM  190 (270)
T ss_pred             ccEEEECCCCCC
Confidence            899999998753

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=97.39  E-value=0.0049  Score=51.87  Aligned_cols=41  Identities=29%  Similarity=0.376  Sum_probs=35.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..++.|++++|+|. |++|+++++.|...|++|.+..|+.++
T Consensus       146 ~~~l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~  186 (287)
T TIGR02853       146 DFTIHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSAD  186 (287)
T ss_pred             CCCCCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence            35789999999999 779999999999999998777776554

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>cd00704 MDH Malate dehydrogenase

Probab=97.37  E-value=0.0036  Score=53.56  Aligned_cols=114  Identities=11%  Similarity=0.123  Sum_probs=68.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHH----HHHHHH
Q 041914           17 VAIITGGASGIGETTARLFADHGA-------RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVK----ALVDST   85 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~----~~~~~~   85 (264)
                      ++.||||+|.+|..++..|+..|.       +++++..+.. . .         .......|++|.....    ..-...
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~-~-~---------~~~g~~~Dl~d~~~~~~~~~~i~~~~   70 (323)
T cd00704           2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPA-M-K---------ALEGVVMELQDCAFPLLKGVVITTDP   70 (323)
T ss_pred             EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCc-c-C---------ccceeeeehhhhcccccCCcEEecCh
Confidence            579999999999999999998653       3455544431 1 0         1234455655542000    000122


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-CCCcEEEEecC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-GVRGSIVCTAS  153 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~~~~iv~iss  153 (264)
                      .+.+.+.|++|+.||....+     ..+   -.+.+..|+    .+++.+.+.+.+. ...+.++++|.
T Consensus        71 ~~~~~~aDiVVitAG~~~~~-----g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsN  127 (323)
T cd00704          71 EEAFKDVDVAILVGAFPRKP-----GME---RADLLRKNA----KIFKEQGEALNKVAKPTVKVLVVGN  127 (323)
T ss_pred             HHHhCCCCEEEEeCCCCCCc-----CCc---HHHHHHHhH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            23345789999999975332     123   344555555    4677777777776 35677777764

Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases

Probab=97.34  E-value=0.0021  Score=54.93  Aligned_cols=158  Identities=10%  Similarity=0.021  Sum_probs=94.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHH----HHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-------RMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVK----ALVD   83 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~----~~~~   83 (264)
                      +++.|+|++|.+|..++..|+..|.       +++++...+.. ..+            ....|+.+.....    ..-.
T Consensus         3 ~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~------------g~a~Dl~~~~~~~~~~~~i~~   70 (322)
T cd01338           3 VRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALE------------GVAMELEDCAFPLLAEIVITD   70 (322)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccc------------eeehhhhhccccccCceEEec
Confidence            5889999999999999999998766       55555443221 111            1222222111000    0000


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCC-----
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGS-----  157 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~-----  157 (264)
                      ...+...+-|++|.+||....+     ..+   -.+.+..|+    .+++.+.+.+.+.. ..+.++++|.-...     
T Consensus        71 ~~~~~~~daDivvitaG~~~k~-----g~t---R~dll~~N~----~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~  138 (322)
T cd01338          71 DPNVAFKDADWALLVGAKPRGP-----GME---RADLLKANG----KIFTAQGKALNDVASRDVKVLVVGNPCNTNALIA  138 (322)
T ss_pred             CcHHHhCCCCEEEEeCCCCCCC-----CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHH
Confidence            1112223789999999975321     123   344556665    46677777777766 36778877743321     


Q ss_pred             ---CC-CCCCchhhchHHHHHHHHHHHHHHhCc--CCceE-EEeeCC
Q 041914          158 ---CG-GKRRTDYHMSKHAVIGLVRSASVQLGV--HGIRV-NCVSPH  197 (264)
Q Consensus       158 ---~~-~~~~~~y~~sK~al~~~~~~la~e~~~--~~i~v-~~v~pG  197 (264)
                         .+ .|....|+.++.--..|...+++.+.-  ..|+. +++-+.
T Consensus       139 ~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH  185 (322)
T cd01338         139 MKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH  185 (322)
T ss_pred             HHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence               22 566778999999999999999998753  33554 334553

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional

Probab=97.33  E-value=0.0004  Score=61.90  Aligned_cols=81  Identities=20%  Similarity=0.223  Sum_probs=56.6

Q ss_pred             ccCCCcEEEEeCCC----------------ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC
Q 041914           11 NKLEGKVAIITGGA----------------SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN   74 (264)
Q Consensus        11 ~~l~~k~vlItGas----------------~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~   74 (264)
                      .+|+||++|||+|.                |-+|.+||+++..+|++|.+++....-.       .. ..+.++..  . 
T Consensus       252 ~~l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~~~GA~VtlI~Gp~~~~-------~p-~~v~~i~V--~-  320 (475)
T PRK13982        252 KPLAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAAAAGAEVTLISGPVDLA-------DP-QGVKVIHV--E-  320 (475)
T ss_pred             cccCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHHHCCCcEEEEeCCcCCC-------CC-CCceEEEe--c-
Confidence            36999999999875                7899999999999999999998653210       01 12344433  3 


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcCCCCCCC
Q 041914           75 ECQVKALVDSTVQNYGQLDIMFSNAGILSSS  105 (264)
Q Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~  105 (264)
                        +.+++.+.+.+.+. .|++|++|++....
T Consensus       321 --ta~eM~~av~~~~~-~Di~I~aAAVaDyr  348 (475)
T PRK13982        321 --SARQMLAAVEAALP-ADIAIFAAAVADWR  348 (475)
T ss_pred             --CHHHHHHHHHhhCC-CCEEEEecccccee
Confidence              33444555555444 69999999986543

>PRK06849 hypothetical protein; Provisional

Probab=97.32  E-value=0.0025  Score=56.07  Aligned_cols=83  Identities=19%  Similarity=0.238  Sum_probs=55.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +.++|||||++.++|.++++.|.+.|++|+++.......... ....  +....++..-.+.+...+.+.++.+++ ++|
T Consensus         3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~-s~~~--d~~~~~p~p~~d~~~~~~~L~~i~~~~-~id   78 (389)
T PRK06849          3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRF-SRAV--DGFYTIPSPRWDPDAYIQALLSIVQRE-NID   78 (389)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHH-HHhh--hheEEeCCCCCCHHHHHHHHHHHHHHc-CCC
Confidence            358999999999999999999999999988887765443321 1111  123333323445555555555665554 589


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|-...
T Consensus        79 ~vIP~~e   85 (389)
T PRK06849         79 LLIPTCE   85 (389)
T ss_pred             EEEECCh
Confidence            9987664

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=97.28  E-value=0.002  Score=55.30  Aligned_cols=77  Identities=21%  Similarity=0.453  Sum_probs=52.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-C-Cc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-G-QL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~-~i   92 (264)
                      |.++||+||+||+|...++.....|+.++++..++++.. .+. .+..+  +.  .|..+.+    +.+++++.. + .+
T Consensus       143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~-~~~-~lGAd--~v--i~y~~~~----~~~~v~~~t~g~gv  212 (326)
T COG0604         143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLE-LLK-ELGAD--HV--INYREED----FVEQVRELTGGKGV  212 (326)
T ss_pred             CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHH-HHH-hcCCC--EE--EcCCccc----HHHHHHHHcCCCCc
Confidence            899999999999999999888888988777777766554 333 22222  12  2344333    455555433 3 59


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |+++...|.
T Consensus       213 Dvv~D~vG~  221 (326)
T COG0604         213 DVVLDTVGG  221 (326)
T ss_pred             eEEEECCCH
Confidence            999988774

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=97.26  E-value=0.0071  Score=51.57  Aligned_cols=79  Identities=23%  Similarity=0.412  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+++++|+|+++++|.++++.+...|++++++.++.+.. +.+.. ... .   ...|..+.+....+.+...+  .++|
T Consensus       166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~-~~~-~---~~~~~~~~~~~~~~~~~~~~--~~~d  237 (342)
T cd08266         166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKL-ERAKE-LGA-D---YVIDYRKEDFVREVRELTGK--RGVD  237 (342)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-cCC-C---eEEecCChHHHHHHHHHhCC--CCCc
Confidence            578999999999999999999999999987777665443 22222 111 1   22355655555555443322  3699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++++++|
T Consensus       238 ~~i~~~g  244 (342)
T cd08266         238 VVVEHVG  244 (342)
T ss_pred             EEEECCc
Confidence            9999987

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=97.23  E-value=0.0013  Score=55.70  Aligned_cols=80  Identities=14%  Similarity=0.166  Sum_probs=60.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHH----cCCcEEEEecCchhhHHHHHhhhCC-----CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           17 VAIITGGASGIGETTARLFAD----HGARMIVIADIQDELGRQVATSIGV-----GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~----~g~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      -++|.||||..|.-+++++.+    .|-+.-+..|+.+++.+.+......     .....+.+|.+|++++.+++.    
T Consensus         7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak----   82 (423)
T KOG2733|consen    7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAK----   82 (423)
T ss_pred             eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHh----
Confidence            479999999999999999999    7888555566666555544433221     223388899999999999998    


Q ss_pred             hcCCccEEEEcCCCCC
Q 041914           88 NYGQLDIMFSNAGILS  103 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~  103 (264)
                         +-.++|||+|...
T Consensus        83 ---~~~vivN~vGPyR   95 (423)
T KOG2733|consen   83 ---QARVIVNCVGPYR   95 (423)
T ss_pred             ---hhEEEEeccccce
Confidence               4589999999654

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.21  E-value=0.0028  Score=47.98  Aligned_cols=77  Identities=17%  Similarity=0.325  Sum_probs=50.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++++++|+|+ |++|.++++.|.+.| ..|.+..|+.+.. +.+.+.....   .+..+..+.++.          ..
T Consensus        16 ~~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~-~~~~~~~~~~---~~~~~~~~~~~~----------~~   80 (155)
T cd01065          16 ELKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKA-KALAERFGEL---GIAIAYLDLEEL----------LA   80 (155)
T ss_pred             CCCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHH-HHHHHHHhhc---ccceeecchhhc----------cc
Confidence            467899999998 899999999999996 6666666654443 3333332211   122334443322          24


Q ss_pred             CccEEEEcCCCCC
Q 041914           91 QLDIMFSNAGILS  103 (264)
Q Consensus        91 ~id~lv~~ag~~~  103 (264)
                      ..|++|++.+...
T Consensus        81 ~~Dvvi~~~~~~~   93 (155)
T cd01065          81 EADLIINTTPVGM   93 (155)
T ss_pred             cCCEEEeCcCCCC
Confidence            7899999987654

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=97.21  E-value=0.0013  Score=58.87  Aligned_cols=80  Identities=19%  Similarity=0.250  Sum_probs=49.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+|+++|||+++ +|.++++.|++.|++|++..+...+......+.... .+.+...+  +...+   .+      .+
T Consensus         2 ~~~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~~-g~~~~~~~--~~~~~---~~------~~   68 (447)
T PRK02472          2 EYQNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLEE-GIKVICGS--HPLEL---LD------ED   68 (447)
T ss_pred             CcCCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHhc-CCEEEeCC--CCHHH---hc------Cc
Confidence            47899999999976 999999999999999777765443222221111111 22232211  11111   11      14


Q ss_pred             ccEEEEcCCCCCC
Q 041914           92 LDIMFSNAGILSS  104 (264)
Q Consensus        92 id~lv~~ag~~~~  104 (264)
                      +|.+|+++|+...
T Consensus        69 ~d~vV~s~gi~~~   81 (447)
T PRK02472         69 FDLMVKNPGIPYT   81 (447)
T ss_pred             CCEEEECCCCCCC
Confidence            8999999998654

>PRK05086 malate dehydrogenase; Provisional

Probab=97.15  E-value=0.0087  Score=50.99  Aligned_cols=117  Identities=15%  Similarity=0.159  Sum_probs=60.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHH-c--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEe-cCCCHHHHHHHHHHHHHhcCC
Q 041914           16 KVAIITGGASGIGETTARLFAD-H--GARMIVIADIQDELGRQVATSIGVGKCHYVHC-DVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~-~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|.||+|++|.+++..|.. .  +..++++.++ +.......+.........+.. +-.+   +.       +...+
T Consensus         1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~-~~~~g~alDl~~~~~~~~i~~~~~~d---~~-------~~l~~   69 (312)
T PRK05086          1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIA-PVTPGVAVDLSHIPTAVKIKGFSGED---PT-------PALEG   69 (312)
T ss_pred             CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecC-CCCcceehhhhcCCCCceEEEeCCCC---HH-------HHcCC
Confidence            4689999999999999998865 2  3344444444 322110011111011111221 1111   11       11236


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .|++|.++|......     .   .-.+.+..|+..    ++.+.+.|.+.+.++.++++|.-.
T Consensus        70 ~DiVIitaG~~~~~~-----~---~R~dll~~N~~i----~~~ii~~i~~~~~~~ivivvsNP~  121 (312)
T PRK05086         70 ADVVLISAGVARKPG-----M---DRSDLFNVNAGI----VKNLVEKVAKTCPKACIGIITNPV  121 (312)
T ss_pred             CCEEEEcCCCCCCCC-----C---CHHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCch
Confidence            899999999854321     1   244556666654    444455556655344455554433

>TIGR00518 alaDH alanine dehydrogenase

Probab=97.15  E-value=0.0052  Score=53.65  Aligned_cols=77  Identities=23%  Similarity=0.369  Sum_probs=51.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +.+++++|.|+ |.+|+..++.+...|++|.++.++.++. +.+......    .+..+..+.+.+.+.+.       ..
T Consensus       165 l~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~-~~l~~~~g~----~v~~~~~~~~~l~~~l~-------~a  231 (370)
T TIGR00518       165 VEPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRL-RQLDAEFGG----RIHTRYSNAYEIEDAVK-------RA  231 (370)
T ss_pred             CCCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHhcCc----eeEeccCCHHHHHHHHc-------cC
Confidence            56788999987 7999999999999999977776665443 333222211    13344555555444432       67


Q ss_pred             cEEEEcCCCC
Q 041914           93 DIMFSNAGIL  102 (264)
Q Consensus        93 d~lv~~ag~~  102 (264)
                      |++|++++..
T Consensus       232 DvVI~a~~~~  241 (370)
T TIGR00518       232 DLLIGAVLIP  241 (370)
T ss_pred             CEEEEccccC
Confidence            9999988653

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=97.14  E-value=0.0025  Score=58.27  Aligned_cols=47  Identities=23%  Similarity=0.468  Sum_probs=36.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS   59 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~   59 (264)
                      .++++|+++|+|+ ||+|++++..|++.|++|+++.|+.++. +.+.+.
T Consensus       375 ~~~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a-~~la~~  421 (529)
T PLN02520        375 SPLAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERA-KELADA  421 (529)
T ss_pred             cCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH-HHHHHH
Confidence            3578999999999 6999999999999999877666654433 444433

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.06  E-value=0.0042  Score=54.89  Aligned_cols=76  Identities=17%  Similarity=0.262  Sum_probs=50.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+++++|.|+ |++|+.+++.|+.+|..-+.+..+..+..+.+.+.....  ..+.     .++....       ...
T Consensus       178 ~l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~--~~~~-----~~~l~~~-------l~~  242 (414)
T PRK13940        178 NISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNA--SAHY-----LSELPQL-------IKK  242 (414)
T ss_pred             CccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCC--eEec-----HHHHHHH-------hcc
Confidence            589999999998 999999999999999765555555544555565554311  1111     1222222       236


Q ss_pred             ccEEEEcCCCC
Q 041914           92 LDIMFSNAGIL  102 (264)
Q Consensus        92 id~lv~~ag~~  102 (264)
                      .|++|++.+..
T Consensus       243 aDiVI~aT~a~  253 (414)
T PRK13940        243 ADIIIAAVNVL  253 (414)
T ss_pred             CCEEEECcCCC
Confidence            79999998753

>TIGR00715 precor6x_red precorrin-6x reductase

Probab=96.91  E-value=0.0043  Score=51.17  Aligned_cols=74  Identities=12%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++||+|||+- |+.++++|.+.|++|++..+..... +.+...    ....+..+..|.+++..++.+-     ++|.+
T Consensus         1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~-~~~~~~----g~~~v~~g~l~~~~l~~~l~~~-----~i~~V   69 (256)
T TIGR00715         1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGK-HLYPIH----QALTVHTGALDPQELREFLKRH-----SIDIL   69 (256)
T ss_pred             CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcc-cccccc----CCceEEECCCCHHHHHHHHHhc-----CCCEE
Confidence            36899999998 9999999999999988877766533 111111    1224556667777766666533     79999


Q ss_pred             EEcCC
Q 041914           96 FSNAG  100 (264)
Q Consensus        96 v~~ag  100 (264)
                      |+.+-
T Consensus        70 IDAtH   74 (256)
T TIGR00715        70 VDATH   74 (256)
T ss_pred             EEcCC
Confidence            98875

This enzyme was found to be a monomer by gel filtration.

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.89  E-value=0.021  Score=51.73  Aligned_cols=84  Identities=18%  Similarity=0.168  Sum_probs=54.5

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.-..++.+++++|.|+ |++|.++|+.|.++|++|.++.+++........+.+....+.++..+-..            
T Consensus         8 ~~~~~~~~~~~v~viG~-G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~~~------------   74 (480)
T PRK01438          8 TSWHSDWQGLRVVVAGL-GVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPGPT------------   74 (480)
T ss_pred             hhcccCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCCcc------------
Confidence            33355688999999997 77999999999999999888776654433333333322233333322111            


Q ss_pred             HhcCCccEEEEcCCCCCC
Q 041914           87 QNYGQLDIMFSNAGILSS  104 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~  104 (264)
                       .....|.+|..+|+...
T Consensus        75 -~~~~~D~Vv~s~Gi~~~   91 (480)
T PRK01438         75 -LPEDTDLVVTSPGWRPD   91 (480)
T ss_pred             -ccCCCCEEEECCCcCCC
Confidence             01358999999998644

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=96.85  E-value=0.047  Score=46.17  Aligned_cols=40  Identities=25%  Similarity=0.255  Sum_probs=34.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .++.+++++|.|. |++|+.++..|...|++|.++.|+.+.
T Consensus       148 ~~l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~  187 (296)
T PRK08306        148 ITIHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAH  187 (296)
T ss_pred             CCCCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            4578999999997 789999999999999998777777554

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=96.84  E-value=0.007  Score=50.80  Aligned_cols=80  Identities=14%  Similarity=0.077  Sum_probs=48.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++|+++|.|+ ||.+++++..|++.|.. +.++.|+.+ ..+.+.+..... .....  +...+++..       ...
T Consensus       122 ~~~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~-ka~~La~~~~~~-~~~~~--~~~~~~~~~-------~~~  189 (282)
T TIGR01809       122 PLAGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPD-KLSRLVDLGVQV-GVITR--LEGDSGGLA-------IEK  189 (282)
T ss_pred             ccCCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHH-HHHHHHHHhhhc-Cccee--ccchhhhhh-------ccc
Confidence            467899999976 99999999999999985 555555544 445555443221 01111  111111111       113


Q ss_pred             CccEEEEcCCCCC
Q 041914           91 QLDIMFSNAGILS  103 (264)
Q Consensus        91 ~id~lv~~ag~~~  103 (264)
                      ..|+|||+.+...
T Consensus       190 ~~DiVInaTp~g~  202 (282)
T TIGR01809       190 AAEVLVSTVPADV  202 (282)
T ss_pred             CCCEEEECCCCCC
Confidence            6899999987653

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=96.83  E-value=0.024  Score=48.46  Aligned_cols=73  Identities=21%  Similarity=0.415  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|++++|+|.. |+|...++.....|++|+++++++++... .. .+..  -+++  |.+|++..+..-+       ..|
T Consensus       166 pG~~V~I~G~G-GlGh~avQ~Aka~ga~Via~~~~~~K~e~-a~-~lGA--d~~i--~~~~~~~~~~~~~-------~~d  231 (339)
T COG1064         166 PGKWVAVVGAG-GLGHMAVQYAKAMGAEVIAITRSEEKLEL-AK-KLGA--DHVI--NSSDSDALEAVKE-------IAD  231 (339)
T ss_pred             CCCEEEEECCc-HHHHHHHHHHHHcCCeEEEEeCChHHHHH-HH-HhCC--cEEE--EcCCchhhHHhHh-------hCc
Confidence            49999999999 99998887777799999999998776522 22 2221  2233  3335544444433       289


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+++
T Consensus       232 ~ii~tv~  238 (339)
T COG1064         232 AIIDTVG  238 (339)
T ss_pred             EEEECCC
Confidence            9999887

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.82  E-value=0.0099  Score=49.89  Aligned_cols=81  Identities=17%  Similarity=0.295  Sum_probs=49.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|+++|.|+ ||-+++++..|++.|+.-+.+..+..+..+.+.+....  ........+   ........       
T Consensus       124 ~~~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~~~~~---~~~~~~~~-------  192 (283)
T PRK14027        124 NAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVD---ARGIEDVI-------  192 (283)
T ss_pred             CcCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceEEecC---HhHHHHHH-------
Confidence            467899999998 99999999999999986555555544444555544321  111111122   11111111       


Q ss_pred             CCccEEEEcCCCCC
Q 041914           90 GQLDIMFSNAGILS  103 (264)
Q Consensus        90 ~~id~lv~~ag~~~  103 (264)
                      ...|++||+..+.-
T Consensus       193 ~~~divINaTp~Gm  206 (283)
T PRK14027        193 AAADGVVNATPMGM  206 (283)
T ss_pred             hhcCEEEEcCCCCC
Confidence            25799999987654

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=96.82  E-value=0.021  Score=51.66  Aligned_cols=114  Identities=17%  Similarity=0.176  Sum_probs=70.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-------------HHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-------------ECQVK   79 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-------------~~~~~   79 (264)
                      ..+.+++|.|+ |.+|...+..+...|+.|+++.++.+.+ +..+. +.   ..++..|..+             .+..+
T Consensus       162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rl-e~a~~-lG---a~~v~v~~~e~g~~~~gYa~~~s~~~~~  235 (511)
T TIGR00561       162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK-EQVQS-MG---AEFLELDFKEEGGSGDGYAKVMSEEFIA  235 (511)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-cC---CeEEeccccccccccccceeecCHHHHH
Confidence            45689999995 9999999999999999977777766543 33322 22   2344444321             23344


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           80 ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        80 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ...+.+.++....|++|+++-+....                     .+..+++..+..|+.   .+.||.++...|
T Consensus       236 ~~~~~~~e~~~~~DIVI~TalipG~~---------------------aP~Lit~emv~~MKp---GsvIVDlA~d~G  288 (511)
T TIGR00561       236 AEMELFAAQAKEVDIIITTALIPGKP---------------------APKLITEEMVDSMKA---GSVIVDLAAEQG  288 (511)
T ss_pred             HHHHHHHHHhCCCCEEEECcccCCCC---------------------CCeeehHHHHhhCCC---CCEEEEeeeCCC
Confidence            44444555556799999998543322                     122234455555654   357777776554

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A

Probab=96.78  E-value=0.0023  Score=41.65  Aligned_cols=34  Identities=29%  Similarity=0.511  Sum_probs=23.3

Q ss_pred             CCC-cEEEEeCCCChhHHH--HHHHHHHcCCcEEEEec
Q 041914           13 LEG-KVAIITGGASGIGET--TARLFADHGARMIVIAD   47 (264)
Q Consensus        13 l~~-k~vlItGas~giG~~--ia~~l~~~g~~v~~~~~   47 (264)
                      +.| |+|||+|+|+|.|.+  |+..| ..|++.+-++-
T Consensus        36 ~~GpK~VLViGaStGyGLAsRIa~aF-g~gA~TiGV~f   72 (78)
T PF12242_consen   36 INGPKKVLVIGASTGYGLASRIAAAF-GAGADTIGVSF   72 (78)
T ss_dssp             -TS-SEEEEES-SSHHHHHHHHHHHH-CC--EEEEEE-
T ss_pred             CCCCceEEEEecCCcccHHHHHHHHh-cCCCCEEEEee
Confidence            455 999999999999999  66666 77888666654

>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []

Probab=96.77  E-value=0.043  Score=40.98  Aligned_cols=110  Identities=18%  Similarity=0.226  Sum_probs=64.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhC---C--CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIG---V--GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.|+|++|.+|.+++..|...+.  +++++.++.........+...   .  .......   .+.+.           .
T Consensus         2 KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~---~~~~~-----------~   67 (141)
T PF00056_consen    2 KVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS---GDYEA-----------L   67 (141)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE---SSGGG-----------G
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhccccccccc---ccccc-----------c
Confidence            578999999999999999999854  555555554433222222211   1  1222222   22222           1


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      .+-|++|..+|....+     ..+   -.+.++.|+.    +++.+.+.+.+...++.++.++
T Consensus        68 ~~aDivvitag~~~~~-----g~s---R~~ll~~N~~----i~~~~~~~i~~~~p~~~vivvt  118 (141)
T PF00056_consen   68 KDADIVVITAGVPRKP-----GMS---RLDLLEANAK----IVKEIAKKIAKYAPDAIVIVVT  118 (141)
T ss_dssp             TTESEEEETTSTSSST-----TSS---HHHHHHHHHH----HHHHHHHHHHHHSTTSEEEE-S
T ss_pred             ccccEEEEeccccccc-----ccc---HHHHHHHhHh----HHHHHHHHHHHhCCccEEEEeC
Confidence            3689999999975332     122   3445555554    5566666666655467777775

L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=96.69  E-value=0.011  Score=49.13  Aligned_cols=107  Identities=14%  Similarity=0.235  Sum_probs=70.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~i   92 (264)
                      .|.+++|++|+|+.|.-+.+--.-+|++|+-++...++. +-+.+++..+.+.    |..++    .+.+.+++.. ..|
T Consensus       150 ~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~-~~l~~~lGfD~~i----dyk~~----d~~~~L~~a~P~GI  220 (340)
T COG2130         150 AGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKC-DFLTEELGFDAGI----DYKAE----DFAQALKEACPKGI  220 (340)
T ss_pred             CCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHH-HHHHHhcCCceee----ecCcc----cHHHHHHHHCCCCe
Confidence            599999999999999876644445799988888876654 4444444433222    33333    2334444444 479


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG  160 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~  160 (264)
                      |+.+-|.|.-.                            ..+.++.|+.   .+||+..+-++.++..
T Consensus       221 DvyfeNVGg~v----------------------------~DAv~~~ln~---~aRi~~CG~IS~YN~~  257 (340)
T COG2130         221 DVYFENVGGEV----------------------------LDAVLPLLNL---FARIPVCGAISQYNAP  257 (340)
T ss_pred             EEEEEcCCchH----------------------------HHHHHHhhcc---ccceeeeeehhhcCCC
Confidence            99999988421                            2356677766   5689888777766543

>PRK00066 ldh L-lactate dehydrogenase; Reviewed

Probab=96.67  E-value=0.08  Score=45.22  Aligned_cols=115  Identities=11%  Similarity=0.180  Sum_probs=67.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      -.++++.|+|+ |++|.+++..|+..|.  +++++..+.+.......+....    .++.. ..  .+.       +.+ 
T Consensus         4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i-~~--~~~-------~~~-   71 (315)
T PRK00066          4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKI-YA--GDY-------SDC-   71 (315)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEE-Ee--CCH-------HHh-
Confidence            45789999998 9999999999999887  5555555444332222222211    11111 11  121       111 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                         .+-|++|..+|....+     ..+.   .+.++.|..    +++.+.+.+.+....+.+++++.-
T Consensus        72 ---~~adivIitag~~~k~-----g~~R---~dll~~N~~----i~~~i~~~i~~~~~~~~vivvsNP  124 (315)
T PRK00066         72 ---KDADLVVITAGAPQKP-----GETR---LDLVEKNLK----IFKSIVGEVMASGFDGIFLVASNP  124 (315)
T ss_pred             ---CCCCEEEEecCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHhCCCeEEEEccCc
Confidence               3789999999975332     1233   344555554    455556666766556788877743

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=96.64  E-value=0.011  Score=50.79  Aligned_cols=80  Identities=16%  Similarity=0.350  Sum_probs=49.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|+++++|..+++.+...|++|+.+.++.++. +.+.+.+..+  .++  |..+.++..+.+.+...  +++|
T Consensus       151 ~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~-~~~~~~lGa~--~vi--~~~~~~~~~~~i~~~~~--~gvd  223 (338)
T cd08295         151 KGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKV-DLLKNKLGFD--DAF--NYKEEPDLDAALKRYFP--NGID  223 (338)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHhcCCc--eeE--EcCCcccHHHHHHHhCC--CCcE
Confidence            589999999999999999988888899977777765543 3332212211  122  32222222222332221  3699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       224 ~v~d~~g  230 (338)
T cd08295         224 IYFDNVG  230 (338)
T ss_pred             EEEECCC
Confidence            9998876

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.62  E-value=0.02  Score=49.52  Aligned_cols=79  Identities=23%  Similarity=0.394  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh-cCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN-YGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~-~~~i   92 (264)
                      +|+.+||.||++|+|...++-....|+..++.+++.+.. + +.+.+..+    ...|..++    +..+++++. .+++
T Consensus       157 ~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~-~-l~k~lGAd----~vvdy~~~----~~~e~~kk~~~~~~  226 (347)
T KOG1198|consen  157 KGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKL-E-LVKKLGAD----EVVDYKDE----NVVELIKKYTGKGV  226 (347)
T ss_pred             CCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchH-H-HHHHcCCc----EeecCCCH----HHHHHHHhhcCCCc
Confidence            588999999999999999977777784445555444432 2 22222221    33466663    333334332 4589


Q ss_pred             cEEEEcCCCC
Q 041914           93 DIMFSNAGIL  102 (264)
Q Consensus        93 d~lv~~ag~~  102 (264)
                      |+++-|.|..
T Consensus       227 DvVlD~vg~~  236 (347)
T KOG1198|consen  227 DVVLDCVGGS  236 (347)
T ss_pred             cEEEECCCCC
Confidence            9999999864

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=96.61  E-value=0.05  Score=49.36  Aligned_cols=112  Identities=17%  Similarity=0.165  Sum_probs=66.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH-------------HHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE-------------CQVK   79 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~-------------~~~~   79 (264)
                      ..+.+|+|+|+ |.+|...+..+...|++|+++.++.+.+ +...+ +.   ..++..|..+.             +..+
T Consensus       163 ~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rl-e~aes-lG---A~~v~i~~~e~~~~~~gya~~~s~~~~~  236 (509)
T PRK09424        163 VPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVA-EQVES-MG---AEFLELDFEEEGGSGDGYAKVMSEEFIK  236 (509)
T ss_pred             cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-cC---CeEEEeccccccccccchhhhcchhHHH
Confidence            46889999986 7899999999999999866666655543 33332 22   22333333221             1112


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           80 ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        80 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      +..+.+.+..+..|++|.+++.....                     ++..+++..+..|++   .+.|+.++..
T Consensus       237 ~~~~~~~~~~~gaDVVIetag~pg~~---------------------aP~lit~~~v~~mkp---GgvIVdvg~~  287 (509)
T PRK09424        237 AEMALFAEQAKEVDIIITTALIPGKP---------------------APKLITAEMVASMKP---GSVIVDLAAE  287 (509)
T ss_pred             HHHHHHHhccCCCCEEEECCCCCccc---------------------CcchHHHHHHHhcCC---CCEEEEEccC
Confidence            22222233335799999999975432                     122234556666664   5688888763

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=96.61  E-value=0.021  Score=49.14  Aligned_cols=36  Identities=19%  Similarity=0.407  Sum_probs=29.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGAR-MIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~   47 (264)
                      ..|.+++|+|.|+ ||+|.++++.|++.|.. +.++.+
T Consensus        20 ~~L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~   56 (338)
T PRK12475         20 RKIREKHVLIVGA-GALGAANAEALVRAGIGKLTIADR   56 (338)
T ss_pred             HhhcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcC
Confidence            4578999999996 78999999999999985 444443

>PLN00203 glutamyl-tRNA reductase

Probab=96.60  E-value=0.024  Score=51.56  Aligned_cols=77  Identities=12%  Similarity=0.210  Sum_probs=49.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +|.+++++|.|+ |.+|..+++.|...|.. |+++.|+.+. .+.+.+......+.+.     ..++....+.       
T Consensus       263 ~l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~er-a~~La~~~~g~~i~~~-----~~~dl~~al~-------  328 (519)
T PLN00203        263 SHASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEER-VAALREEFPDVEIIYK-----PLDEMLACAA-------  328 (519)
T ss_pred             CCCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHH-HHHHHHHhCCCceEee-----cHhhHHHHHh-------
Confidence            388999999999 99999999999999974 5555555444 4555444322122221     1222333332       


Q ss_pred             CccEEEEcCCCC
Q 041914           91 QLDIMFSNAGIL  102 (264)
Q Consensus        91 ~id~lv~~ag~~  102 (264)
                      ..|++|.+.+..
T Consensus       329 ~aDVVIsAT~s~  340 (519)
T PLN00203        329 EADVVFTSTSSE  340 (519)
T ss_pred             cCCEEEEccCCC
Confidence            679999887644

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.60  E-value=0.0092  Score=49.99  Aligned_cols=38  Identities=21%  Similarity=0.387  Sum_probs=33.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      ..+++||+++|.|.++-.|+.++..|.++|++|.++.|
T Consensus       154 ~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~  191 (283)
T PRK14192        154 NIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHS  191 (283)
T ss_pred             CCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeC
Confidence            45789999999999999999999999999998666665

>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases

Probab=96.59  E-value=0.073  Score=45.25  Aligned_cols=112  Identities=14%  Similarity=0.199  Sum_probs=66.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCC------CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGV------GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +++.|.|+ |++|..++..|+..|  .+++++.++.+.. +.....+.+      ...... .  .+.+.       +  
T Consensus         1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~-~~~a~dL~~~~~~~~~~~~i~-~--~~~~~-------l--   66 (306)
T cd05291           1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKA-EGEALDLEDALAFLPSPVKIK-A--GDYSD-------C--   66 (306)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchh-hHhHhhHHHHhhccCCCeEEE-c--CCHHH-------h--
Confidence            36788896 999999999999999  4666666655543 322222211      111111 1  22211       1  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                        .+-|++|+++|....+     ..+.   .+.++.|+    .+++...+.+++..+.+.++++|.-.
T Consensus        67 --~~aDIVIitag~~~~~-----g~~R---~dll~~N~----~i~~~~~~~i~~~~~~~~vivvsNP~  120 (306)
T cd05291          67 --KDADIVVITAGAPQKP-----GETR---LDLLEKNA----KIMKSIVPKIKASGFDGIFLVASNPV  120 (306)
T ss_pred             --CCCCEEEEccCCCCCC-----CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecChH
Confidence              3789999999875321     1232   34455554    45666666677766567788777433

L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.53  E-value=0.024  Score=47.75  Aligned_cols=83  Identities=12%  Similarity=0.199  Sum_probs=48.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCch--hhHHHHHhhhCCC---cEEEEEecCCCHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQD--ELGRQVATSIGVG---KCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~--~~~~~~~~~~~~~---~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      .++++|++||.|+ ||-+++++..|+..|.. +.++.|+.+  +..+.+.+.....   .+.+.  ++.+.+.+.     
T Consensus       120 ~~~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~--~~~~~~~l~-----  191 (288)
T PRK12749        120 FDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVT--DLADQQAFA-----  191 (288)
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEe--chhhhhhhh-----
Confidence            4578899999997 66699999999999985 455556543  2344454443221   11221  121111111     


Q ss_pred             HHHhcCCccEEEEcCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILS  103 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~  103 (264)
                        +...+.|+|||+..+..
T Consensus       192 --~~~~~aDivINaTp~Gm  208 (288)
T PRK12749        192 --EALASADILTNGTKVGM  208 (288)
T ss_pred             --hhcccCCEEEECCCCCC
Confidence              12236899999886543

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=96.50  E-value=0.11  Score=42.32  Aligned_cols=80  Identities=20%  Similarity=0.265  Sum_probs=54.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||--|.||.|..+|+.+...|+.++......++......    .+.-  +..|.+.++-+++..+-...  .++|
T Consensus       146 pGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ake----nG~~--h~I~y~~eD~v~~V~kiTng--KGVd  217 (336)
T KOG1197|consen  146 PGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKE----NGAE--HPIDYSTEDYVDEVKKITNG--KGVD  217 (336)
T ss_pred             CCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHh----cCCc--ceeeccchhHHHHHHhccCC--CCce
Confidence            58899999999999999999999999998888887776533322    1111  33466665554444332211  2689


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      +++-..|.
T Consensus       218 ~vyDsvG~  225 (336)
T KOG1197|consen  218 AVYDSVGK  225 (336)
T ss_pred             eeeccccc
Confidence            88877664

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=96.50  E-value=0.015  Score=50.33  Aligned_cols=80  Identities=18%  Similarity=0.350  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|++|++|...++.....|++|+.+.++.++. +.+.+.+..+  ..+  |..+.+...+.+.+...  +++|
T Consensus       158 ~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~-~~~~~~lGa~--~vi--~~~~~~~~~~~i~~~~~--~gvD  230 (348)
T PLN03154        158 KGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKV-DLLKNKLGFD--EAF--NYKEEPDLDAALKRYFP--EGID  230 (348)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHHhcCCC--EEE--ECCCcccHHHHHHHHCC--CCcE
Confidence            589999999999999999988888899977766655443 2222122221  122  22222222222322221  3689


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       231 ~v~d~vG  237 (348)
T PLN03154        231 IYFDNVG  237 (348)
T ss_pred             EEEECCC
Confidence            9998877

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=96.49  E-value=0.05  Score=44.21  Aligned_cols=36  Identities=25%  Similarity=0.412  Sum_probs=29.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      ..|..++|+|.|. ||+|..+++.|++.|..-+.+.+
T Consensus         7 ~~L~~~~VlVvG~-GGvGs~va~~Lar~GVg~i~LvD   42 (231)
T cd00755           7 EKLRNAHVAVVGL-GGVGSWAAEALARSGVGKLTLID   42 (231)
T ss_pred             HHHhCCCEEEECC-CHHHHHHHHHHHHcCCCEEEEEC
Confidence            3577889999975 79999999999999996555443

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=96.48  E-value=0.039  Score=48.46  Aligned_cols=49  Identities=29%  Similarity=0.500  Sum_probs=39.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG   61 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~   61 (264)
                      +|+++++||.|+ |-+|.-+|++|+++|...+.+..+.....+.++..++
T Consensus       175 ~L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~  223 (414)
T COG0373         175 SLKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLG  223 (414)
T ss_pred             ccccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhC
Confidence            389999999997 6799999999999997767777666666666665544

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=96.47  E-value=0.02  Score=48.18  Aligned_cols=79  Identities=27%  Similarity=0.462  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+++++|+|+++++|..+++.+...|++++++.+..+.. +.+.+ ... .   ...|..+.+...++.... . .+.+|
T Consensus       139 ~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~-~~~~~-~g~-~---~~~~~~~~~~~~~~~~~~-~-~~~~d  210 (323)
T cd05276         139 AGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKL-EACRA-LGA-D---VAINYRTEDFAEEVKEAT-G-GRGVD  210 (323)
T ss_pred             CCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHHH-cCC-C---EEEeCCchhHHHHHHHHh-C-CCCeE
Confidence            578999999999999999999999999977777754433 33322 221 1   123444333333332222 1 13699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      .+|++.|
T Consensus       211 ~vi~~~g  217 (323)
T cd05276         211 VILDMVG  217 (323)
T ss_pred             EEEECCc
Confidence            9999987

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.46  E-value=0.014  Score=48.73  Aligned_cols=82  Identities=16%  Similarity=0.278  Sum_probs=50.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+..+++++|.|| ||-+++++..|++.|.. +.++-|+.++ .+++.+............+..+.+...          
T Consensus       122 ~~~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~r-a~~La~~~~~~~~~~~~~~~~~~~~~~----------  189 (283)
T COG0169         122 VDVTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRER-AEELADLFGELGAAVEAAALADLEGLE----------  189 (283)
T ss_pred             cccCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhhhccccccccccccccccc----------
Confidence            3456899999986 78999999999999965 5555555444 455555544211111112222221111          


Q ss_pred             CCccEEEEcCCCCCCC
Q 041914           90 GQLDIMFSNAGILSSS  105 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~  105 (264)
                       ..|++||+.+..-..
T Consensus       190 -~~dliINaTp~Gm~~  204 (283)
T COG0169         190 -EADLLINATPVGMAG  204 (283)
T ss_pred             -ccCEEEECCCCCCCC
Confidence             369999999876554

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.46  E-value=0.012  Score=43.07  Aligned_cols=88  Identities=19%  Similarity=0.276  Sum_probs=52.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC----------CcEEEEEecCCCHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----------GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      .-++-|.|+ |.+|.++++.|.+.|+.|..+..+.....+.++.....          .....+-+-+.|. .+..+.++
T Consensus        10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aDlv~iavpDd-aI~~va~~   87 (127)
T PF10727_consen   10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDADLVFIAVPDD-AIAEVAEQ   87 (127)
T ss_dssp             --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-SEEEE-S-CC-HHHHHHHH
T ss_pred             ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccccccccCCEEEEEechH-HHHHHHHH
Confidence            456778887 89999999999999999888877665554544443321          1122232333433 77888888


Q ss_pred             HHHh--cCCccEEEEcCCCCCC
Q 041914           85 TVQN--YGQLDIMFSNAGILSS  104 (264)
Q Consensus        85 ~~~~--~~~id~lv~~ag~~~~  104 (264)
                      +...  +.+=.++||+.|....
T Consensus        88 La~~~~~~~g~iVvHtSGa~~~  109 (127)
T PF10727_consen   88 LAQYGAWRPGQIVVHTSGALGS  109 (127)
T ss_dssp             HHCC--S-TT-EEEES-SS--G
T ss_pred             HHHhccCCCCcEEEECCCCChH
Confidence            8765  3233689999997654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.45  E-value=0.0069  Score=48.15  Aligned_cols=39  Identities=28%  Similarity=0.431  Sum_probs=33.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..+++||+++|+|.. .+|+.+++.|.+.|++|++..++.
T Consensus        23 ~~~l~gk~v~I~G~G-~vG~~~A~~L~~~G~~Vvv~D~~~   61 (200)
T cd01075          23 TDSLEGKTVAVQGLG-KVGYKLAEHLLEEGAKLIVADINE   61 (200)
T ss_pred             CCCCCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCH
Confidence            457899999999985 899999999999999977554443

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=96.45  E-value=0.015  Score=49.75  Aligned_cols=79  Identities=13%  Similarity=0.296  Sum_probs=49.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|+++++|..+++.....|++|+.+.++.++. +.+. .+..+  .++  |..+.+...+.+..+..  +++|
T Consensus       138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~-~~~~-~lGa~--~vi--~~~~~~~~~~~~~~~~~--~gvd  209 (325)
T TIGR02825       138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKV-AYLK-KLGFD--VAF--NYKTVKSLEETLKKASP--DGYD  209 (325)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH-HcCCC--EEE--eccccccHHHHHHHhCC--CCeE
Confidence            588999999999999999988888899977777765543 3332 22221  122  22222233333333321  3699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       210 vv~d~~G  216 (325)
T TIGR02825       210 CYFDNVG  216 (325)
T ss_pred             EEEECCC
Confidence            9998876

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>PTZ00117 malate dehydrogenase; Provisional

Probab=96.41  E-value=0.038  Score=47.28  Aligned_cols=117  Identities=15%  Similarity=0.187  Sum_probs=67.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCc----EEEEEecCCCHHHHHHHHHHHHHh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGK----CHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.+++.|+|+ |.+|..++..++..| .+++++..+.+.......+......    ...+.. .+|.   + .+      
T Consensus         4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d~---~-~l------   71 (319)
T PTZ00117          4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNNY---E-DI------   71 (319)
T ss_pred             CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCCH---H-Hh------
Confidence            5678999997 889999999999998 6755555544332211111111000    011111 1122   1 11      


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                       .+-|++|.++|.....     ..+   -.+.+..|.    .+.+.+.+.+.+..+.+.+++++...
T Consensus        72 -~~ADiVVitag~~~~~-----g~~---r~dll~~n~----~i~~~i~~~i~~~~p~a~vivvsNP~  125 (319)
T PTZ00117         72 -KDSDVVVITAGVQRKE-----EMT---REDLLTING----KIMKSVAESVKKYCPNAFVICVTNPL  125 (319)
T ss_pred             -CCCCEEEECCCCCCCC-----CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecChH
Confidence             2679999999875332     122   244555666    46677777777765466677776544

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=96.38  E-value=0.028  Score=47.82  Aligned_cols=38  Identities=26%  Similarity=0.555  Sum_probs=33.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+.+++|+|+++++|.++++.+...|++|+.+.+..+.
T Consensus       162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~  199 (332)
T cd08259         162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEK  199 (332)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHH
Confidence            47899999999999999999999999998777765543

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.34  E-value=0.049  Score=45.80  Aligned_cols=74  Identities=22%  Similarity=0.274  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCC-CHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT-NECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++-|+|+.| ||.--++.-...|.+|+++++...+..+.+... ..+    ...|.+ |++.++++.+.       .
T Consensus       181 pG~~vgI~GlGG-LGh~aVq~AKAMG~rV~vis~~~~kkeea~~~L-GAd----~fv~~~~d~d~~~~~~~~-------~  247 (360)
T KOG0023|consen  181 PGKWVGIVGLGG-LGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSL-GAD----VFVDSTEDPDIMKAIMKT-------T  247 (360)
T ss_pred             CCcEEEEecCcc-cchHHHHHHHHhCcEEEEEeCCchhHHHHHHhc-Ccc----eeEEecCCHHHHHHHHHh-------h
Confidence            699999999988 886555444445999999998876665544433 221    334667 77777776663       3


Q ss_pred             cEEEEcCC
Q 041914           93 DIMFSNAG  100 (264)
Q Consensus        93 d~lv~~ag  100 (264)
                      |.++|++.
T Consensus       248 dg~~~~v~  255 (360)
T KOG0023|consen  248 DGGIDTVS  255 (360)
T ss_pred             cCcceeee
Confidence            55555544

>PRK15116 sulfur acceptor protein CsdL; Provisional

Probab=96.34  E-value=0.087  Score=43.74  Aligned_cols=34  Identities=21%  Similarity=0.266  Sum_probs=27.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEE
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIV   44 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~   44 (264)
                      ...|.+.+|+|.|+ ||+|..+++.|++.|..-+.
T Consensus        25 ~~kL~~s~VlVvG~-GGVGs~vae~Lar~GVg~it   58 (268)
T PRK15116         25 LQLFADAHICVVGI-GGVGSWAAEALARTGIGAIT   58 (268)
T ss_pred             HHHhcCCCEEEECc-CHHHHHHHHHHHHcCCCEEE
Confidence            34578899999975 79999999999999954333

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=96.33  E-value=0.037  Score=49.29  Aligned_cols=74  Identities=22%  Similarity=0.407  Sum_probs=47.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+++++|.|+ |.+|..+++.|...|. +++++.|+.+. ...+......   ..+     +.++....+       .
T Consensus       179 ~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~r-a~~la~~~g~---~~~-----~~~~~~~~l-------~  241 (423)
T PRK00045        179 DLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLER-AEELAEEFGG---EAI-----PLDELPEAL-------A  241 (423)
T ss_pred             CccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHH-HHHHHHHcCC---cEe-----eHHHHHHHh-------c
Confidence            478999999987 9999999999999998 45555554443 3334333221   111     122332222       2


Q ss_pred             CccEEEEcCCCC
Q 041914           91 QLDIMFSNAGIL  102 (264)
Q Consensus        91 ~id~lv~~ag~~  102 (264)
                      ..|++|.+.+..
T Consensus       242 ~aDvVI~aT~s~  253 (423)
T PRK00045        242 EADIVISSTGAP  253 (423)
T ss_pred             cCCEEEECCCCC
Confidence            679999997643

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.32  E-value=0.029  Score=47.18  Aligned_cols=47  Identities=13%  Similarity=0.186  Sum_probs=34.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSI   60 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~   60 (264)
                      ++.+|+++|.|+ ||.|++++..|++.|.. +.++.|+ .+..+.+.+.+
T Consensus       124 ~~~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~-~~ka~~la~~l  171 (284)
T PRK12549        124 DASLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVD-PARAAALADEL  171 (284)
T ss_pred             CccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCC-HHHHHHHHHHH
Confidence            567899999997 78999999999999985 4455554 44445555443

>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity

Probab=96.30  E-value=0.037  Score=47.11  Aligned_cols=117  Identities=18%  Similarity=0.194  Sum_probs=63.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc--EEEEecCch-hhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR--MIVIADIQD-ELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~--v~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++.|+|++|.+|..++..|+..|..  |+++.+... +..+.....+..    .... .....++.  ..    .    
T Consensus         1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~-~~i~~~~d--~~----~----   69 (309)
T cd05294           1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID-AEIKISSD--LS----D----   69 (309)
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCC-cEEEECCC--HH----H----
Confidence            36899999999999999999999865  777777431 111111111110    0000 01111111  11    1    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ..+-|++|.++|.....     ..+.   .+.++.|+.    +++.+.+.+.+....+.++++++..
T Consensus        70 l~~aDiViitag~p~~~-----~~~r---~dl~~~n~~----i~~~~~~~i~~~~~~~~viv~~npv  124 (309)
T cd05294          70 VAGSDIVIITAGVPRKE-----GMSR---LDLAKKNAK----IVKKYAKQIAEFAPDTKILVVTNPV  124 (309)
T ss_pred             hCCCCEEEEecCCCCCC-----CCCH---HHHHHHHHH----HHHHHHHHHHHHCCCeEEEEeCCch
Confidence            13789999999874321     1232   344444544    4445555555544467888887654

The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.29  E-value=0.012  Score=45.23  Aligned_cols=38  Identities=24%  Similarity=0.368  Sum_probs=33.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .+|.+|+++|.|++.-.|..+++.|.++|++|.++.|+
T Consensus        40 ~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~   77 (168)
T cd01080          40 IDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSK   77 (168)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECC
Confidence            46999999999996667999999999999997777765

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]

Probab=96.28  E-value=0.055  Score=39.42  Aligned_cols=80  Identities=15%  Similarity=0.196  Sum_probs=53.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCch-hhH------------------HHHHhhhCCCcEEEEEecCCCHH
Q 041914           17 VAIITGGASGIGETTARLFAD-HGARMIVIADIQD-ELG------------------RQVATSIGVGKCHYVHCDVTNEC   76 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~-~~~------------------~~~~~~~~~~~~~~~~~D~s~~~   76 (264)
                      ++.|.|++|.+|+.+++.+.+ .+.+++....+.. +..                  ..+.+....   -=+-.|+|.++
T Consensus         2 rV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g~d~g~~~~~~~~~~~v~~~l~~~~~~---~DVvIDfT~p~   78 (124)
T PF01113_consen    2 RVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVGKDVGELAGIGPLGVPVTDDLEELLEE---ADVVIDFTNPD   78 (124)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTTSBCHHHCTSST-SSBEBS-HHHHTTH----SEEEEES-HH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccccchhhhhhCcCCcccccchhHHHhccc---CCEEEEcCChH
Confidence            689999999999999999999 6877655544433 000                  011111111   11667999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGI  101 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~  101 (264)
                      .+...++...+.  ++.+++-..|.
T Consensus        79 ~~~~~~~~~~~~--g~~~ViGTTG~  101 (124)
T PF01113_consen   79 AVYDNLEYALKH--GVPLVIGTTGF  101 (124)
T ss_dssp             HHHHHHHHHHHH--T-EEEEE-SSS
T ss_pred             HhHHHHHHHHhC--CCCEEEECCCC
Confidence            999999988877  78888888775

In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=96.26  E-value=0.13  Score=42.17  Aligned_cols=79  Identities=24%  Similarity=0.358  Sum_probs=49.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ..+++++|+|+++ +|.++++.+...|.+|+++.++++.. +.+.+ ...  -..  .|..+.+....+.   ....+.+
T Consensus       133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~-~g~--~~~--~~~~~~~~~~~~~---~~~~~~~  202 (271)
T cd05188         133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKL-ELAKE-LGA--DHV--IDYKEEDLEEELR---LTGGGGA  202 (271)
T ss_pred             CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHH-HHHHH-hCC--cee--ccCCcCCHHHHHH---HhcCCCC
Confidence            3688999999998 99999998888999977777665432 32322 211  112  2333332333322   1223479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|++++.
T Consensus       203 d~vi~~~~~  211 (271)
T cd05188         203 DVVIDAVGG  211 (271)
T ss_pred             CEEEECCCC
Confidence            999998763

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>cd08293 PTGR2 Prostaglandin reductase

Probab=96.23  E-value=0.027  Score=48.47  Aligned_cols=78  Identities=15%  Similarity=0.350  Sum_probs=47.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +.++||+|+++++|..+++.....|+ +|+.+.++.++. +.+.+.+....  ++  |..+. +..+.+.++..  +++|
T Consensus       155 ~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~-~~~~~~lGa~~--vi--~~~~~-~~~~~i~~~~~--~gvd  226 (345)
T cd08293         155 NQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKC-QLLKSELGFDA--AI--NYKTD-NVAERLRELCP--EGVD  226 (345)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHHHhcCCcE--EE--ECCCC-CHHHHHHHHCC--CCce
Confidence            38999999999999999987777898 677776665543 33332222211  22  22221 22222222221  3699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       227 ~vid~~g  233 (345)
T cd08293         227 VYFDNVG  233 (345)
T ss_pred             EEEECCC
Confidence            9998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=96.19  E-value=0.035  Score=47.33  Aligned_cols=74  Identities=27%  Similarity=0.435  Sum_probs=46.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+++++|.|+ |.+|..+++.|...|...+.+..+..+..+.+.+....   ..+     +.+++.+.+.       .
T Consensus       175 ~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~g~---~~~-----~~~~~~~~l~-------~  238 (311)
T cd05213         175 NLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKELGG---NAV-----PLDELLELLN-------E  238 (311)
T ss_pred             CccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHcCC---eEE-----eHHHHHHHHh-------c
Confidence            378999999987 99999999999997755444444444333444444322   122     2223333332       5


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      .|++|.+.+.
T Consensus       239 aDvVi~at~~  248 (311)
T cd05213         239 ADVVISATGA  248 (311)
T ss_pred             CCEEEECCCC
Confidence            7999998774

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=96.17  E-value=0.056  Score=48.06  Aligned_cols=74  Identities=22%  Similarity=0.426  Sum_probs=47.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+++++|.|+ |.+|..+++.|...| .+|+++.|+.+.. ..+.+....   ..+..     ++..+.+.       
T Consensus       177 ~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra-~~la~~~g~---~~i~~-----~~l~~~l~-------  239 (417)
T TIGR01035       177 SLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERA-EDLAKELGG---EAVKF-----EDLEEYLA-------  239 (417)
T ss_pred             CccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHcCC---eEeeH-----HHHHHHHh-------
Confidence            588999999997 999999999999999 5666666654433 333333221   12221     23333332       


Q ss_pred             CccEEEEcCCCC
Q 041914           91 QLDIMFSNAGIL  102 (264)
Q Consensus        91 ~id~lv~~ag~~  102 (264)
                      ..|++|.+.+..
T Consensus       240 ~aDvVi~aT~s~  251 (417)
T TIGR01035       240 EADIVISSTGAP  251 (417)
T ss_pred             hCCEEEECCCCC
Confidence            579999887643

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG3007 Uncharacterized paraquat-inducible protein B [Function unknown]

Probab=96.16  E-value=0.63  Score=38.78  Aligned_cols=237  Identities=13%  Similarity=0.098  Sum_probs=128.4

Q ss_pred             CCcEEEEeCCCChhHHH--HHHHHHHcCCcEEEEe--cCchhh-----H----HHHHhhhC-CC-cEEEEEecCCCHHHH
Q 041914           14 EGKVAIITGGASGIGET--TARLFADHGARMIVIA--DIQDEL-----G----RQVATSIG-VG-KCHYVHCDVTNECQV   78 (264)
Q Consensus        14 ~~k~vlItGas~giG~~--ia~~l~~~g~~v~~~~--~~~~~~-----~----~~~~~~~~-~~-~~~~~~~D~s~~~~~   78 (264)
                      ..|+|||.|+|+|.|.+  |+..|- .|+..+-+.  |...+.     .    ..+.+... .+ -.+.+..|..+.+--
T Consensus        40 gPKkVLviGaSsGyGLa~RIsaaFG-~gAdTiGVffE~pgte~~~gtagwyn~~~f~~~A~~kGlyAksingDaFS~e~k  118 (398)
T COG3007          40 GPKKVLVIGASSGYGLAARISAAFG-PGADTIGVFFERPGTERKPGTAGWYNNAAFKKFAKQKGLYAKSINGDAFSDEMK  118 (398)
T ss_pred             CCceEEEEecCCcccHHHHHHHHhC-CCCceeeEEeecCCccCCCcchhhhHHHHHHHHHHhcCceeeecccchhhHHHH
Confidence            46999999999998885  444454 466655443  111110     0    11111111 12 345677898888888


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCC--------------------------------CCccCCCHHHHHHHHhhHHH
Q 041914           79 KALVDSTVQNYGQLDIMFSNAGILSSSD--------------------------------QTVLDLDFSAFDRLFAINVR  126 (264)
Q Consensus        79 ~~~~~~~~~~~~~id~lv~~ag~~~~~~--------------------------------~~~~~~~~~~~~~~~~~n~~  126 (264)
                      ++.++.+++.+|.+|.+|+.-+......                                ..++..+.+++++...+  +
T Consensus       119 ~kvIe~Ik~~~g~vDlvvYSlAsp~Rk~pktgev~~SalKpIg~a~~~~~ldt~kd~i~e~~lepAseqEI~~Tv~V--M  196 (398)
T COG3007         119 QKVIEAIKQDFGKVDLVVYSLASPRRKHPKTGEVFRSALKPIGEAVSGRTLDTEKDVIIEATLEPASEQEIADTVAV--M  196 (398)
T ss_pred             HHHHHHHHHhhccccEEEEeccCccccCCCcchhhHhhhcchhhhccccccccccceeeeeecccccHHHHHHHHHh--h
Confidence            9999999999999999998765322110                                02223344444443222  1


Q ss_pred             HHH---HHHHHHHHHHHcCCCCcEEEEecCCCCC--CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccC
Q 041914          127 GMA---ACVKHAARVMVEGGVRGSIVCTASVAGS--CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLAT  201 (264)
Q Consensus       127 ~~~---~l~~~~l~~~~~~~~~~~iv~iss~~~~--~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t  201 (264)
                      |--   ..+.+++..=.-.. ..+-+-.|-+...  .|.-....-+.+|.=|+.-++.+...+++.+=..++.-.-.+-|
T Consensus       197 GGeDWq~WidaLl~advlae-g~kTiAfsYiG~~iT~~IYw~GtiG~AK~DLd~~~~~inekLa~~gG~A~vsVlKavVT  275 (398)
T COG3007         197 GGEDWQMWIDALLEADVLAE-GAKTIAFSYIGEKITHPIYWDGTIGRAKKDLDQKSLAINEKLAALGGGARVSVLKAVVT  275 (398)
T ss_pred             CcchHHHHHHHHHhcccccc-CceEEEEEecCCccccceeeccccchhhhcHHHHHHHHHHHHHhcCCCeeeeehHHHHh
Confidence            111   11222222111111 2344444433333  23344566889999999999999999988765666555544555


Q ss_pred             cccccccCCCh--HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          202 PLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       202 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ........++.  ..+...+.       .-.+.|-+.+.+..|.++.  --.|+.+.+|-.-.|
T Consensus       276 qASsaIP~~plYla~lfkvMK-------ekg~HEgcIeQi~rlfse~--ly~g~~~~~D~e~rl  330 (398)
T COG3007         276 QASSAIPMMPLYLAILFKVMK-------EKGTHEGCIEQIDRLFSEK--LYSGSKIQLDDEGRL  330 (398)
T ss_pred             hhhhccccccHHHHHHHHHHH-------HcCcchhHHHHHHHHHHHH--hhCCCCCCcCccccc
Confidence            44333322221  11222222       2235567778887777543  223677777654433

>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent

Probab=96.16  E-value=0.023  Score=48.36  Aligned_cols=113  Identities=17%  Similarity=0.215  Sum_probs=67.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHH-----HHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALV-----DSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~-----~~~~~~~   89 (264)
                      ++.|+|++|.+|.+++..|+..+.  +++++..+. ..              ....|+.+........     +...+.+
T Consensus         1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~-a~--------------g~a~DL~~~~~~~~i~~~~~~~~~~~~~   65 (312)
T TIGR01772         1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAG-AA--------------GVAADLSHIPTAASVKGFSGEEGLENAL   65 (312)
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCC-Cc--------------EEEchhhcCCcCceEEEecCCCchHHHc
Confidence            368999999999999999998875  445554433 11              1222222211000000     0012233


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      .+-|++|..+|....+     ..   +-.+.+..|+.    +++...+.+.+..+++.++++|.-..
T Consensus        66 ~daDivvitaG~~~~~-----g~---~R~dll~~N~~----I~~~i~~~i~~~~p~~iiivvsNPvD  120 (312)
T TIGR01772        66 KGADVVVIPAGVPRKP-----GM---TRDDLFNVNAG----IVKDLVAAVAESCPKAMILVITNPVN  120 (312)
T ss_pred             CCCCEEEEeCCCCCCC-----Cc---cHHHHHHHhHH----HHHHHHHHHHHhCCCeEEEEecCchh
Confidence            4789999999974321     12   24456666665    66677777777665778888877664

Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=96.12  E-value=0.061  Score=46.41  Aligned_cols=37  Identities=22%  Similarity=0.519  Sum_probs=30.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEec
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIAD   47 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~   47 (264)
                      ..+|..++|+|.|+ ||+|..+++.|++.|. ++.++.+
T Consensus        19 Q~~L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~   56 (339)
T PRK07688         19 QQKLREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDR   56 (339)
T ss_pred             HHHhcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeC
Confidence            34688899999998 8999999999999999 4455443

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=96.12  E-value=0.018  Score=48.48  Aligned_cols=78  Identities=15%  Similarity=0.228  Sum_probs=54.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ..++|.||+|..|.-+|++|+++|.+-.+..|+..++ ..+...+.. ++..++  +-+++.+++.+.       +.++|
T Consensus         7 ~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl-~~l~~~LG~-~~~~~p--~~~p~~~~~~~~-------~~~VV   75 (382)
T COG3268           7 YDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKL-DALRASLGP-EAAVFP--LGVPAALEAMAS-------RTQVV   75 (382)
T ss_pred             eeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHH-HHHHHhcCc-cccccC--CCCHHHHHHHHh-------cceEE
Confidence            4579999999999999999999999965555555544 444444433 233343  344666666665       78999


Q ss_pred             EEcCCCCCC
Q 041914           96 FSNAGILSS  104 (264)
Q Consensus        96 v~~ag~~~~  104 (264)
                      +||+|....
T Consensus        76 lncvGPyt~   84 (382)
T COG3268          76 LNCVGPYTR   84 (382)
T ss_pred             Eeccccccc
Confidence            999996554

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=96.06  E-value=0.034  Score=49.92  Aligned_cols=72  Identities=17%  Similarity=0.196  Sum_probs=48.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++|.|+ |.+|+++++.|.+.|..|+++.++.+.. +.+.+.   ..+.++.+|.++...++++-      ..+.|.+|
T Consensus         2 ~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~-~~~~~~---~~~~~~~gd~~~~~~l~~~~------~~~a~~vi   70 (453)
T PRK09496          2 KIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERL-RRLQDR---LDVRTVVGNGSSPDVLREAG------AEDADLLI   70 (453)
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHH-HHHHhh---cCEEEEEeCCCCHHHHHHcC------CCcCCEEE
Confidence            5788887 9999999999999999988887766543 333221   13566677777665554430      12456665


Q ss_pred             EcC
Q 041914           97 SNA   99 (264)
Q Consensus        97 ~~a   99 (264)
                      .+.
T Consensus        71 ~~~   73 (453)
T PRK09496         71 AVT   73 (453)
T ss_pred             Eec
Confidence            544

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=96.06  E-value=0.07  Score=42.81  Aligned_cols=203  Identities=15%  Similarity=0.068  Sum_probs=116.3

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..+.+.+-.+.++.|+.+..|.++|+.-...|.+|.++.++..+....   .. .+.+.++..|.-...-.+..      
T Consensus        45 d~~~dve~e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~l~---sw-~~~vswh~gnsfssn~~k~~------  114 (283)
T KOG4288|consen   45 DDKQDVEVEWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQTLS---SW-PTYVSWHRGNSFSSNPNKLK------  114 (283)
T ss_pred             cchhhhhHHHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcchhh---CC-CcccchhhccccccCcchhh------
Confidence            335566667889999999999999999999999999999887643221   11 12455555554322111111      


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                       ...+..++-+.|....            ...+..+|=.......+++    .+.+ -.++++||..-.-.+.--...|-
T Consensus       115 -l~g~t~v~e~~ggfgn------------~~~m~~ing~ani~a~kaa----~~~g-v~~fvyISa~d~~~~~~i~rGY~  176 (283)
T KOG4288|consen  115 -LSGPTFVYEMMGGFGN------------IILMDRINGTANINAVKAA----AKAG-VPRFVYISAHDFGLPPLIPRGYI  176 (283)
T ss_pred             -hcCCcccHHHhcCccc------------hHHHHHhccHhhHHHHHHH----HHcC-CceEEEEEhhhcCCCCccchhhh
Confidence             1245555555554332            2344455555555556665    3444 57999999765533332334688


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---------ChHHHHhhc---CCCCCC----CCCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---------PADEVEKLF---EPQTPL----EGVVLR  231 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---------~~~~~~~~~---~~~~~~----~~~~~~  231 (264)
                      -+|.+.+.-.      +...+.|-..+.||++...  +...++         +.+......   ..+.|.    -..-+.
T Consensus       177 ~gKR~AE~El------l~~~~~rgiilRPGFiyg~--R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvn  248 (283)
T KOG4288|consen  177 EGKREAEAEL------LKKFRFRGIILRPGFIYGT--RNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVN  248 (283)
T ss_pred             ccchHHHHHH------HHhcCCCceeeccceeecc--cccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcC
Confidence            8998765422      2223456667899998765  221111         111111221   111222    122356


Q ss_pred             hHHHHHHHHHHhCCC
Q 041914          232 AGHVADAVLFLACRD  246 (264)
Q Consensus       232 ~edva~~~~~l~s~~  246 (264)
                      +|+||.+++.-+.+.
T Consensus       249 ve~VA~aal~ai~dp  263 (283)
T KOG4288|consen  249 VESVALAALKAIEDP  263 (283)
T ss_pred             HHHHHHHHHHhccCC
Confidence            799999999988643

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.02  E-value=0.04  Score=43.85  Aligned_cols=40  Identities=25%  Similarity=0.341  Sum_probs=35.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..+++||.+||.|| |.+|...++.|.+.|++|.++.+...
T Consensus         5 ~l~l~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~   44 (202)
T PRK06718          5 MIDLSNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELT   44 (202)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCC
Confidence            45789999999998 89999999999999999888876543

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=95.98  E-value=0.071  Score=42.51  Aligned_cols=60  Identities=25%  Similarity=0.366  Sum_probs=42.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT   73 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s   73 (264)
                      +.+++||++||.|| |.+|..-++.|.+.|++|.+++....+..+.+.+   .+++.++.-+..
T Consensus         4 ~l~l~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~---~~~i~~~~~~~~   63 (205)
T TIGR01470         4 FANLEGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAE---QGGITWLARCFD   63 (205)
T ss_pred             EEEcCCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHH---cCCEEEEeCCCC
Confidence            34689999999996 6788999999999999988887665543333322   235566555544

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=95.98  E-value=0.039  Score=44.72  Aligned_cols=74  Identities=23%  Similarity=0.325  Sum_probs=55.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      .++|.| .|-+|..+|+.|.+.|.+|+++.+.++...+..++.   -..+.+.+|-++++.++++=-      .+.|++|
T Consensus         2 ~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~---~~~~~v~gd~t~~~~L~~agi------~~aD~vv   71 (225)
T COG0569           2 KIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADE---LDTHVVIGDATDEDVLEEAGI------DDADAVV   71 (225)
T ss_pred             EEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhh---cceEEEEecCCCHHHHHhcCC------CcCCEEE
Confidence            344554 578999999999999999999998877765544432   257889999999987776611      3678888


Q ss_pred             EcCC
Q 041914           97 SNAG  100 (264)
Q Consensus        97 ~~ag  100 (264)
                      ...+
T Consensus        72 a~t~   75 (225)
T COG0569          72 AATG   75 (225)
T ss_pred             EeeC
Confidence            7766

>PRK05690 molybdopterin biosynthesis protein MoeB; Provisional

Probab=95.97  E-value=0.083  Score=43.38  Aligned_cols=35  Identities=20%  Similarity=0.448  Sum_probs=29.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      ..|+.++|+|.|+ ||+|..+++.|+..|..-+.+.
T Consensus        28 ~~L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lv   62 (245)
T PRK05690         28 EKLKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLV   62 (245)
T ss_pred             HHhcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEE
Confidence            4578999999998 9999999999999998644443

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.96  E-value=0.049  Score=45.83  Aligned_cols=81  Identities=17%  Similarity=0.172  Sum_probs=53.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..++.||.+.|.|.++-+|+.++..|.++|++|.+..++.....+...    ...  ++-.=+.++..+....       
T Consensus       154 ~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~----~AD--IVIsavg~~~~v~~~~-------  220 (301)
T PRK14194        154 CGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCR----QAD--IVVAAVGRPRLIDADW-------  220 (301)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHh----cCC--EEEEecCChhcccHhh-------
Confidence            347899999999999999999999999999998877666554332221    112  2333334444444332       


Q ss_pred             CCccEEEEcCCCCC
Q 041914           90 GQLDIMFSNAGILS  103 (264)
Q Consensus        90 ~~id~lv~~ag~~~  103 (264)
                      -+...+|...|+..
T Consensus       221 ik~GaiVIDvgin~  234 (301)
T PRK14194        221 LKPGAVVIDVGINR  234 (301)
T ss_pred             ccCCcEEEEecccc
Confidence            14556666667654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=95.93  E-value=0.028  Score=41.91  Aligned_cols=40  Identities=20%  Similarity=0.292  Sum_probs=35.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..+++||+++|.|-+.-.|+.++..|.++|++|.++.++.
T Consensus        23 ~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t   62 (140)
T cd05212          23 GVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKT   62 (140)
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCC
Confidence            3579999999999999999999999999999977776543

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA

Probab=95.93  E-value=0.076  Score=43.09  Aligned_cols=36  Identities=25%  Similarity=0.500  Sum_probs=29.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      ..+|..++|+|.| .||+|.++++.|++.|..-+.+.
T Consensus        16 q~~L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lv   51 (228)
T cd00757          16 QEKLKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLV   51 (228)
T ss_pred             HHHHhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEE
Confidence            3457889999998 68999999999999999755544

Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1).

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=95.92  E-value=0.093  Score=41.75  Aligned_cols=36  Identities=33%  Similarity=0.535  Sum_probs=29.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      ..+|.+++|+|.| .||+|..+++.|+..|..-+.+.
T Consensus        16 q~kl~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lv   51 (202)
T TIGR02356        16 QQRLLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIV   51 (202)
T ss_pred             HHHhcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEe
Confidence            4468899999998 68999999999999998534433

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PLN02928 oxidoreductase family protein

Probab=95.89  E-value=0.036  Score=47.96  Aligned_cols=37  Identities=24%  Similarity=0.373  Sum_probs=32.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .++.||++.|.|- |.||+++++.|...|.+|+...+.
T Consensus       155 ~~l~gktvGIiG~-G~IG~~vA~~l~afG~~V~~~dr~  191 (347)
T PLN02928        155 DTLFGKTVFILGY-GAIGIELAKRLRPFGVKLLATRRS  191 (347)
T ss_pred             cCCCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4689999999997 999999999999999997777664

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.82  E-value=0.028  Score=47.02  Aligned_cols=39  Identities=23%  Similarity=0.444  Sum_probs=35.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      ..+++||+++|+|.+.-+|+.++..|.++|++|.++.++
T Consensus       153 ~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~  191 (286)
T PRK14175        153 DIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSR  191 (286)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            347999999999999999999999999999998877765

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=95.81  E-value=0.025  Score=43.11  Aligned_cols=43  Identities=26%  Similarity=0.424  Sum_probs=32.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ..+++||+++|.|.|.-+|+.++..|.++|+.|.++.....+.
T Consensus        31 ~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l   73 (160)
T PF02882_consen   31 GIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL   73 (160)
T ss_dssp             T-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH
T ss_pred             CCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc
Confidence            4579999999999999999999999999999977766655444

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family

Probab=95.77  E-value=0.054  Score=44.95  Aligned_cols=115  Identities=15%  Similarity=0.127  Sum_probs=62.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcC----CcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           18 AIITGGASGIGETTARLFADHG----ARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g----~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +.|+|++|.+|..++..|+..|    .+++++..+++.+.. ....+.. .... ....++-.++....+       .+-
T Consensus         1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~-~~~dl~~~~~~~-~~~~i~~~~d~~~~~-------~~a   71 (263)
T cd00650           1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKG-VAMDLQDAVEPL-ADIKVSITDDPYEAF-------KDA   71 (263)
T ss_pred             CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchH-HHHHHHHhhhhc-cCcEEEECCchHHHh-------CCC
Confidence            4689998899999999999999    676666655543322 2222221 1111 011111111112222       378


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      |++|..+|.....     ..+   -...+..|    ..+.+.+.+.+.+..+++.++++|.
T Consensus        72 DiVv~t~~~~~~~-----g~~---r~~~~~~n----~~i~~~i~~~i~~~~p~a~~i~~tN  120 (263)
T cd00650          72 DVVIITAGVGRKP-----GMG---RLDLLKRN----VPIVKEIGDNIEKYSPDAWIIVVSN  120 (263)
T ss_pred             CEEEECCCCCCCc-----CCC---HHHHHHHH----HHHHHHHHHHHHHHCCCeEEEEecC
Confidence            9999999875432     112   12233333    3445556666666554677777764

Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=95.76  E-value=0.079  Score=45.68  Aligned_cols=77  Identities=19%  Similarity=0.310  Sum_probs=46.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ..|++++|+|+ |++|...++.+...|++ |+++.+++++. +.+.+ +...  .+  .|..+. ++.    ++.+..+.
T Consensus       168 ~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~-~~a~~-lGa~--~v--i~~~~~-~~~----~~~~~~g~  235 (343)
T PRK09880        168 LQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSL-SLARE-MGAD--KL--VNPQND-DLD----HYKAEKGY  235 (343)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHH-HHHHH-cCCc--EE--ecCCcc-cHH----HHhccCCC
Confidence            36899999986 99999999888888985 55555554443 33322 3221  22  233332 222    22222356


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       236 ~D~vid~~G~  245 (343)
T PRK09880        236 FDVSFEVSGH  245 (343)
T ss_pred             CCEEEECCCC
Confidence            9999999873

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=95.69  E-value=0.22  Score=43.89  Aligned_cols=118  Identities=16%  Similarity=0.210  Sum_probs=63.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ..|++++| .|++++|..+++.+...|++++++.+...+..+.+.+ +.-   .  ..|..+..+..+.+.++... ..+
T Consensus       184 ~~g~~VlV-~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~-~Ga---~--~v~~~~~~~~~~~v~~~~~~-~g~  255 (393)
T TIGR02819       184 GPGSTVYI-AGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARS-FGC---E--TVDLSKDATLPEQIEQILGE-PEV  255 (393)
T ss_pred             CCCCEEEE-ECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHH-cCC---e--EEecCCcccHHHHHHHHcCC-CCC
Confidence            35889999 4569999999988888899976665544433333332 221   2  12333222222223322211 258


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      |++|.+.|....+  ...+..    .       ...-..++.++..+++   .|++++++..
T Consensus       256 Dvvid~~G~~~~~--~~~~~~----~-------~~~~~~~~~~~~~~~~---~G~i~~~G~~  301 (393)
T TIGR02819       256 DCAVDCVGFEARG--HGHDGK----K-------EAPATVLNSLMEVTRV---GGAIGIPGLY  301 (393)
T ss_pred             cEEEECCCCcccc--cccccc----c-------cchHHHHHHHHHHhhC---CCEEEEeeec
Confidence            9999999864221  111110    0       0122233444555555   5799998764

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=95.65  E-value=0.078  Score=44.70  Aligned_cols=79  Identities=25%  Similarity=0.397  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+++++|+|+++++|..+++.+...|++++++.+..+.. +.+ ....- + ..  .+..+.+....+.. ... ..++|
T Consensus       139 ~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~-~~~-~~~g~-~-~~--~~~~~~~~~~~~~~-~~~-~~~~d  210 (325)
T TIGR02824       139 AGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKC-AAC-EALGA-D-IA--INYREEDFVEVVKA-ETG-GKGVD  210 (325)
T ss_pred             CCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHH-HHcCC-c-EE--EecCchhHHHHHHH-HcC-CCCeE
Confidence            578999999999999999999999999987777765443 222 22221 1 11  22222322222222 211 13599


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      .+|+++|
T Consensus       211 ~~i~~~~  217 (325)
T TIGR02824       211 VILDIVG  217 (325)
T ss_pred             EEEECCc
Confidence            9999876

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.65  E-value=0.073  Score=52.26  Aligned_cols=78  Identities=17%  Similarity=0.250  Sum_probs=57.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-Cc------------EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG-AR------------MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKA   80 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g-~~------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~   80 (264)
                      ..|+|+|.|+ |.+|+..++.|++.. +.            ++.+++...+..+.+.+...  ++..+++|++|.+++.+
T Consensus       568 ~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~--~~~~v~lDv~D~e~L~~  644 (1042)
T PLN02819        568 KSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIE--NAEAVQLDVSDSESLLK  644 (1042)
T ss_pred             cCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcC--CCceEEeecCCHHHHHH
Confidence            4789999997 999999999999863 22            34555555444444444332  35679999999988887


Q ss_pred             HHHHHHHhcCCccEEEEcCCC
Q 041914           81 LVDSTVQNYGQLDIMFSNAGI  101 (264)
Q Consensus        81 ~~~~~~~~~~~id~lv~~ag~  101 (264)
                      +++       .+|+||++.+.
T Consensus       645 ~v~-------~~DaVIsalP~  658 (1042)
T PLN02819        645 YVS-------QVDVVISLLPA  658 (1042)
T ss_pred             hhc-------CCCEEEECCCc
Confidence            766       58999999874

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=95.65  E-value=0.06  Score=40.97  Aligned_cols=44  Identities=25%  Similarity=0.256  Sum_probs=31.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ   55 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~   55 (264)
                      .-+.||+++|.| -|.+|+.+|+.|...|++|.+....+....+.
T Consensus        19 ~~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA   62 (162)
T PF00670_consen   19 LMLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQA   62 (162)
T ss_dssp             S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH
T ss_pred             eeeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHh
Confidence            447899999987 68999999999999999977777766544443

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=95.55  E-value=0.11  Score=44.32  Aligned_cols=79  Identities=20%  Similarity=0.393  Sum_probs=49.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+.+++|.|+++++|.++++.+.+.|++|+.+.+..++. +.+.+.....  .++  |..+.+..+++. +...  +++|
T Consensus       145 ~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~-~~~~~~~g~~--~~~--~~~~~~~~~~v~-~~~~--~~~d  216 (329)
T cd05288         145 PGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKC-RWLVEELGFD--AAI--NYKTPDLAEALK-EAAP--DGID  216 (329)
T ss_pred             CCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHhhcCCc--eEE--ecCChhHHHHHH-Hhcc--CCce
Confidence            578999999999999999999999999987777665443 2222212211  122  222332222222 2221  4699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       217 ~vi~~~g  223 (329)
T cd05288         217 VYFDNVG  223 (329)
T ss_pred             EEEEcch
Confidence            9998876

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>PTZ00082 L-lactate dehydrogenase; Provisional

Probab=95.54  E-value=0.22  Score=42.61  Aligned_cols=121  Identities=12%  Similarity=0.167  Sum_probs=67.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCC----C-cEEEEEecCCCHHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGV----G-KCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.+++.|.| +|.+|..++..++..|. +++++..+++.......+....    + ...+..  .+|.+       .+  
T Consensus         5 ~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~I~~--~~d~~-------~l--   72 (321)
T PTZ00082          5 KRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSKVIG--TNNYE-------DI--   72 (321)
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeEEEE--CCCHH-------Hh--
Confidence            347899999 58899999999999995 7555555444321111111110    1 112221  12211       11  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                        .+-|++|.++|......  -.+.+++ -.+.+..|+    .+.+.+.+.+.+..+.+.++++|...
T Consensus        73 --~~aDiVI~tag~~~~~~--~~~~~~~-r~~~l~~n~----~i~~~i~~~i~~~~p~a~~iv~sNP~  131 (321)
T PTZ00082         73 --AGSDVVIVTAGLTKRPG--KSDKEWN-RDDLLPLNA----KIMDEVAEGIKKYCPNAFVIVITNPL  131 (321)
T ss_pred             --CCCCEEEECCCCCCCCC--CCcCCCC-HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcH
Confidence              26799999999754321  1111111 144455554    46777777777765466777777544

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.53  E-value=0.11  Score=43.83  Aligned_cols=80  Identities=18%  Similarity=0.167  Sum_probs=52.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+++||+++|.|-++-+|+.++..|.++|+.|.+..++..+..+..    ..  ..++-+=+.++..++..+       -
T Consensus       154 i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~----~~--ADIVIsavg~~~~v~~~~-------l  220 (296)
T PRK14188        154 GDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVC----RR--ADILVAAVGRPEMVKGDW-------I  220 (296)
T ss_pred             CCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHH----hc--CCEEEEecCChhhcchhe-------e
Confidence            4689999999999999999999999999999777743333332222    11  123333444454444332       2


Q ss_pred             CccEEEEcCCCCC
Q 041914           91 QLDIMFSNAGILS  103 (264)
Q Consensus        91 ~id~lv~~ag~~~  103 (264)
                      +...+|-..|+..
T Consensus       221 k~GavVIDvGin~  233 (296)
T PRK14188        221 KPGATVIDVGINR  233 (296)
T ss_pred             cCCCEEEEcCCcc
Confidence            4566777777754

>PRK04308 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=95.52  E-value=0.26  Score=44.25  Aligned_cols=77  Identities=16%  Similarity=0.202  Sum_probs=49.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +.+|+++|+|.+ +.|.++++.|+++|+.|.+....... ....+.+. . ..+.++..... ..    ..       ..
T Consensus         3 ~~~~~~~v~G~g-~~G~~~a~~l~~~g~~v~~~d~~~~~~~~~~l~~~-~-~gi~~~~g~~~-~~----~~-------~~   67 (445)
T PRK04308          3 FQNKKILVAGLG-GTGISMIAYLRKNGAEVAAYDAELKPERVAQIGKM-F-DGLVFYTGRLK-DA----LD-------NG   67 (445)
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCchhHHHHhhc-c-CCcEEEeCCCC-HH----HH-------hC
Confidence            678999999985 99999999999999997776654432 11222110 0 12333333222 11    11       26


Q ss_pred             ccEEEEcCCCCCC
Q 041914           92 LDIMFSNAGILSS  104 (264)
Q Consensus        92 id~lv~~ag~~~~  104 (264)
                      .|.+|..+|+...
T Consensus        68 ~d~vv~spgi~~~   80 (445)
T PRK04308         68 FDILALSPGISER   80 (445)
T ss_pred             CCEEEECCCCCCC
Confidence            7999999998654

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.52  E-value=0.19  Score=37.04  Aligned_cols=77  Identities=18%  Similarity=0.284  Sum_probs=46.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-------------------hhhHHHHHh----hhCCCcEEEEEec
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQ-------------------DELGRQVAT----SIGVGKCHYVHCD   71 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-------------------~~~~~~~~~----~~~~~~~~~~~~D   71 (264)
                      .++++|.|+ |++|..+++.|++.|..-+.+.+..                   ....+.+++    .....++..+..+
T Consensus         2 ~~~v~iiG~-G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~   80 (135)
T PF00899_consen    2 NKRVLIIGA-GGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEK   80 (135)
T ss_dssp             T-EEEEEST-SHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESH
T ss_pred             CCEEEEECc-CHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeecc
Confidence            467777775 8999999999999999644433210                   111122222    2233567778778


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEcCC
Q 041914           72 VTNECQVKALVDSTVQNYGQLDIMFSNAG  100 (264)
Q Consensus        72 ~s~~~~~~~~~~~~~~~~~~id~lv~~ag  100 (264)
                      + +.+...++++       ..|++|.+..
T Consensus        81 ~-~~~~~~~~~~-------~~d~vi~~~d  101 (135)
T PF00899_consen   81 I-DEENIEELLK-------DYDIVIDCVD  101 (135)
T ss_dssp             C-SHHHHHHHHH-------TSSEEEEESS
T ss_pred             c-cccccccccc-------CCCEEEEecC
Confidence            8 3444555553       6799888743

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=95.51  E-value=0.079  Score=45.10  Aligned_cols=78  Identities=18%  Similarity=0.364  Sum_probs=48.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+||++++|..+++.....|++|+.+.+..++. +.+.+ ..-.  .++  |..+.+..++ +.+...  +++|
T Consensus       143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~-~~l~~-~Ga~--~vi--~~~~~~~~~~-v~~~~~--~gvd  213 (329)
T cd08294         143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKV-AWLKE-LGFD--AVF--NYKTVSLEEA-LKEAAP--DGID  213 (329)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-cCCC--EEE--eCCCccHHHH-HHHHCC--CCcE
Confidence            578999999999999999888888899977777665543 33322 2211  222  3333222222 222211  3689


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       214 ~vld~~g  220 (329)
T cd08294         214 CYFDNVG  220 (329)
T ss_pred             EEEECCC
Confidence            9998776

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=95.50  E-value=0.088  Score=44.44  Aligned_cols=38  Identities=21%  Similarity=0.399  Sum_probs=33.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+++++|+|+++++|.++++.+...|++++++.+....
T Consensus       144 ~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~  181 (328)
T cd08268         144 PGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEK  181 (328)
T ss_pred             CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence            57899999999999999999999999998888776543

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>TIGR01759 MalateDH-SF1 malate dehydrogenase

Probab=95.44  E-value=0.22  Score=42.61  Aligned_cols=118  Identities=11%  Similarity=0.084  Sum_probs=64.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-------RMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      -++.|+|++|.+|.+++..|...|.       +++++..... +..+.....+.+....... +..    +.   ....+
T Consensus         4 ~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~-~~~----i~---~~~~~   75 (323)
T TIGR01759         4 VRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLA-GVV----AT---TDPEE   75 (323)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccC-CcE----Ee---cChHH
Confidence            3688999999999999999998875       5555554332 2122222122111100000 100    00   01112


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-CcEEEEecC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-RGSIVCTAS  153 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-~~~iv~iss  153 (264)
                      ...+-|++|..||....+     ..   +-.+.++.|+.    +++.+.+.+.+... ++.++++|.
T Consensus        76 ~~~daDvVVitAG~~~k~-----g~---tR~dll~~Na~----i~~~i~~~i~~~~~~~~iiivvsN  130 (323)
T TIGR01759        76 AFKDVDAALLVGAFPRKP-----GM---ERADLLSKNGK----IFKEQGKALNKVAKKDVKVLVVGN  130 (323)
T ss_pred             HhCCCCEEEEeCCCCCCC-----CC---cHHHHHHHHHH----HHHHHHHHHHhhCCCCeEEEEeCC
Confidence            223679999999974321     12   34456666654    56666666677654 667777763

This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=95.43  E-value=0.082  Score=37.72  Aligned_cols=71  Identities=15%  Similarity=0.194  Sum_probs=49.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      ++|.|. +.+|+.+++.|.+.+.+|+++.++++.. +.+.+.    .+.++.+|.++++.++++--      .+.+.+|.
T Consensus         1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~-~~~~~~----~~~~i~gd~~~~~~l~~a~i------~~a~~vv~   68 (116)
T PF02254_consen    1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERV-EELREE----GVEVIYGDATDPEVLERAGI------EKADAVVI   68 (116)
T ss_dssp             EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHH-HHHHHT----TSEEEES-TTSHHHHHHTTG------GCESEEEE
T ss_pred             eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHH-HHHHhc----ccccccccchhhhHHhhcCc------cccCEEEE
Confidence            456666 5899999999999887888887776553 333222    36789999999988876521      36788876


Q ss_pred             cCC
Q 041914           98 NAG  100 (264)
Q Consensus        98 ~ag  100 (264)
                      ...
T Consensus        69 ~~~   71 (116)
T PF02254_consen   69 LTD   71 (116)
T ss_dssp             ESS
T ss_pred             ccC
Confidence            654

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=95.39  E-value=0.048  Score=42.43  Aligned_cols=44  Identities=27%  Similarity=0.302  Sum_probs=35.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG   53 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~   53 (264)
                      ...++.|+++.|.|- |.||+++++.|...|.+|+...+...+..
T Consensus        30 ~~~~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~   73 (178)
T PF02826_consen   30 PGRELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEE   73 (178)
T ss_dssp             TBS-STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHH
T ss_pred             CccccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhh
Confidence            456789999999975 99999999999999999888888776543

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=95.35  E-value=0.016  Score=40.77  Aligned_cols=38  Identities=32%  Similarity=0.542  Sum_probs=32.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      .+++||++||.|+ |.+|..-++.|.+.|++|.+++...
T Consensus         3 l~l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~   40 (103)
T PF13241_consen    3 LDLKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI   40 (103)
T ss_dssp             E--TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE
T ss_pred             EEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch
Confidence            4689999999999 9999999999999999988888875

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.33  E-value=0.054  Score=45.22  Aligned_cols=40  Identities=25%  Similarity=0.388  Sum_probs=34.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..+++||+++|.|.|.-+|+.++..|.++|++|.++..+.
T Consensus       152 ~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t  191 (285)
T PRK14191        152 HIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT  191 (285)
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc
Confidence            3478999999999999999999999999999977765443

>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases

Probab=95.24  E-value=0.16  Score=43.27  Aligned_cols=116  Identities=16%  Similarity=0.166  Sum_probs=64.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCC-cEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++.|+|++|.+|.+++..|+..+.  +++++..+  .......+..... ......+. .+ ++       +.+.+.+-|
T Consensus         2 KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~~~~~~i~~~~-~~-~~-------~y~~~~daD   70 (310)
T cd01337           2 KVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHINTPAKVTGYL-GP-EE-------LKKALKGAD   70 (310)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhCCCcceEEEec-CC-Cc-------hHHhcCCCC
Confidence            678999999999999999998874  55555544  2111111111110 00111110 00 01       112234789


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++|.+||....+     ..   .-.+.++.|+.-    ++...+.+.+..+++.++++|.-.
T Consensus        71 ivvitaG~~~k~-----g~---tR~dll~~N~~i----~~~i~~~i~~~~p~a~vivvtNPv  120 (310)
T cd01337          71 VVVIPAGVPRKP-----GM---TRDDLFNINAGI----VRDLATAVAKACPKALILIISNPV  120 (310)
T ss_pred             EEEEeCCCCCCC-----CC---CHHHHHHHHHHH----HHHHHHHHHHhCCCeEEEEccCch
Confidence            999999975321     12   245566666654    455555556555477888887665

MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>PLN00112 malate dehydrogenase (NADP); Provisional

Probab=95.23  E-value=0.33  Score=43.29  Aligned_cols=114  Identities=8%  Similarity=0.053  Sum_probs=67.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-------CC--cEEEEecCchhhHHHHHhhhCC-----CcEEEEEecCCCHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADH-------GA--RMIVIADIQDELGRQVATSIGV-----GKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-------g~--~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~   81 (264)
                      -+|.|+|++|.+|.+++..|+..       +.  +++++.++.+.......+....     .++ .+..  .+.      
T Consensus       101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v-~i~~--~~y------  171 (444)
T PLN00112        101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREV-SIGI--DPY------  171 (444)
T ss_pred             eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCce-EEec--CCH------
Confidence            47899999999999999999988       55  4555555444433332222211     011 1111  121      


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCCcEEEEecCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVE-GGVRGSIVCTASVA  155 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~-~~~~~~iv~iss~~  155 (264)
                           +.+.+-|++|..+|....+     ..+   -.+.++.|+.    +++...+.+.+ .+.++.+|++|.-.
T Consensus       172 -----e~~kdaDiVVitAG~prkp-----G~t---R~dLl~~N~~----I~k~i~~~I~~~a~p~~ivIVVsNPv  229 (444)
T PLN00112        172 -----EVFQDAEWALLIGAKPRGP-----GME---RADLLDINGQ----IFAEQGKALNEVASRNVKVIVVGNPC  229 (444)
T ss_pred             -----HHhCcCCEEEECCCCCCCC-----CCC---HHHHHHHHHH----HHHHHHHHHHHhcCCCeEEEEcCCcH
Confidence                 1223789999999974321     122   3455666654    56666777777 45477888777443

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.23  E-value=0.25  Score=39.25  Aligned_cols=38  Identities=29%  Similarity=0.341  Sum_probs=30.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~   48 (264)
                      ..+|..++|+|.|+ ||+|..++..|++.|.. ++++...
T Consensus        16 q~~L~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        16 VQKLEQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             HHHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence            44578899999998 78999999999999995 5555443

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase

Probab=95.22  E-value=0.098  Score=45.86  Aligned_cols=104  Identities=18%  Similarity=0.240  Sum_probs=62.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ..+++.|.||||.+|.++.+.|.++ +.++..+.++... .+.+.+..    ......|+.+..+++..      .+.+.
T Consensus        37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~sa-G~~i~~~~----~~l~~~~~~~~~~~~~~------~~~~~  105 (381)
T PLN02968         37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKA-GQSFGSVF----PHLITQDLPNLVAVKDA------DFSDV  105 (381)
T ss_pred             cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhc-CCCchhhC----ccccCccccceecCCHH------HhcCC
Confidence            4568999999999999999999999 7787777775332 22221111    11122333322222211      12368


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG  159 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~  159 (264)
                      |++|.+.+-.                            ..+.+.|.|.+   ..+||-.|+..-..+
T Consensus       106 DvVf~Alp~~----------------------------~s~~i~~~~~~---g~~VIDlSs~fRl~~  141 (381)
T PLN02968        106 DAVFCCLPHG----------------------------TTQEIIKALPK---DLKIVDLSADFRLRD  141 (381)
T ss_pred             CEEEEcCCHH----------------------------HHHHHHHHHhC---CCEEEEcCchhccCC
Confidence            9999876521                            34455666632   357888888776544

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=95.21  E-value=0.045  Score=49.50  Aligned_cols=41  Identities=20%  Similarity=0.344  Sum_probs=33.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .++.+++++|+|+ ||+|++++..|++.|+++++..|+.++.
T Consensus       328 ~~~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~  368 (477)
T PRK09310        328 IPLNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHA  368 (477)
T ss_pred             CCcCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            4578899999996 7999999999999999876666654433

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.19  E-value=0.18  Score=44.22  Aligned_cols=36  Identities=25%  Similarity=0.440  Sum_probs=29.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      ..+.+++|+|.|+ ||+|..+++.|+..|..-+.+.+
T Consensus       131 ~~l~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD  166 (376)
T PRK08762        131 RRLLEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVD  166 (376)
T ss_pred             HHHhcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEe
Confidence            3578899999965 89999999999999996444443

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.19  E-value=0.23  Score=39.85  Aligned_cols=36  Identities=25%  Similarity=0.357  Sum_probs=29.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      ..+|..++|+|.|+ ||+|..+++.|++.|..-+.+.
T Consensus        23 q~~L~~~~V~ViG~-GglGs~ia~~La~~Gvg~i~lv   58 (212)
T PRK08644         23 LEKLKKAKVGIAGA-GGLGSNIAVALARSGVGNLKLV   58 (212)
T ss_pred             HHHHhCCCEEEECc-CHHHHHHHHHHHHcCCCeEEEE
Confidence            34578899999995 8999999999999999744443

>cd05191 NAD_bind_amino_acid_DH NAD(P) binding domain of amino acid dehydrogenase-like proteins

Probab=95.17  E-value=0.14  Score=34.55  Aligned_cols=36  Identities=33%  Similarity=0.725  Sum_probs=28.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      .++.+++++|.|. |..|+.++..|.+.+...+.+.+
T Consensus        19 ~~~~~~~v~i~G~-G~~g~~~a~~l~~~~~~~v~v~~   54 (86)
T cd05191          19 KSLKGKTVVVLGA-GEVGKGIAKLLADEGGKKVVLCD   54 (86)
T ss_pred             CCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Confidence            4588999999999 99999999999999543344443

Amino acid dehydrogenase(DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and are found in glutamate, leucine, and phenylalanine DHs (DHs), methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily includes a wide variety of protein families including NAD(P)- binding domains of alcohol DHs, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate DH, lactate/malate DHs, formate/glycerate DHs, siroheme synthases, 6-phosphogluconate DH, amino acid DHs, repressor rex, NAD-binding potassium channel domain, CoA-binding, and ornithine cyclodeaminase-like domains. These domains have an al

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.14  E-value=0.18  Score=43.09  Aligned_cols=37  Identities=16%  Similarity=0.291  Sum_probs=32.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .++.||++.|.|- |.||+++++.+...|.+|+...+.
T Consensus       143 ~~l~gktvgIiG~-G~IG~~va~~l~~fg~~V~~~~~~  179 (314)
T PRK06932        143 TDVRGSTLGVFGK-GCLGTEVGRLAQALGMKVLYAEHK  179 (314)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCC
Confidence            4789999999986 999999999999999997766543

>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]

Probab=95.11  E-value=0.058  Score=42.73  Aligned_cols=70  Identities=16%  Similarity=0.177  Sum_probs=47.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-------------CcEEEEEecCCCHHHHHHHHHH
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-------------GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ....+|+|-||.+++++|++.|++|++..|+.++..+...+.+..             ..+.++..-+   +.+..++.+
T Consensus         3 ~~~i~GtGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~~~i~~~~~~dA~~~aDVVvLAVP~---~a~~~v~~~   79 (211)
T COG2085           3 IIAIIGTGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALGPLITGGSNEDAAALADVVVLAVPF---EAIPDVLAE   79 (211)
T ss_pred             EEEEeccChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhccccccCChHHHHhcCCEEEEeccH---HHHHhHHHH
Confidence            356788999999999999999999888878887766655554421             2344444433   345556666


Q ss_pred             HHHhcC
Q 041914           85 TVQNYG   90 (264)
Q Consensus        85 ~~~~~~   90 (264)
                      +...++
T Consensus        80 l~~~~~   85 (211)
T COG2085          80 LRDALG   85 (211)
T ss_pred             HHHHhC
Confidence            666554

>PRK05442 malate dehydrogenase; Provisional

Probab=95.10  E-value=0.21  Score=42.86  Aligned_cols=114  Identities=11%  Similarity=0.052  Sum_probs=64.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHH----HHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-------RMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVK----ALVD   83 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~----~~~~   83 (264)
                      +++.|+|++|.+|..++..|+..|.       +++++..++.. ..            .....|+.+.....    ....
T Consensus         5 ~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~------------~g~a~Dl~~~~~~~~~~~~i~~   72 (326)
T PRK05442          5 VRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKAL------------EGVVMELDDCAFPLLAGVVITD   72 (326)
T ss_pred             cEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCccccc------------ceeehhhhhhhhhhcCCcEEec
Confidence            5889999999999999999988655       44555443221 11            12222332221000    0001


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTAS  153 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss  153 (264)
                      ...+.+.+-|++|.+||....+     ..   +-.+.++.|+    .+++.+.+.+.+.. ..+.++++|.
T Consensus        73 ~~y~~~~daDiVVitaG~~~k~-----g~---tR~dll~~Na----~i~~~i~~~i~~~~~~~~iiivvsN  131 (326)
T PRK05442         73 DPNVAFKDADVALLVGARPRGP-----GM---ERKDLLEANG----AIFTAQGKALNEVAARDVKVLVVGN  131 (326)
T ss_pred             ChHHHhCCCCEEEEeCCCCCCC-----CC---cHHHHHHHHH----HHHHHHHHHHHHhCCCCeEEEEeCC
Confidence            1122334789999999974321     12   3455566665    45667777777733 3677777774

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.07  E-value=0.22  Score=42.44  Aligned_cols=37  Identities=24%  Similarity=0.371  Sum_probs=32.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .+|.||++.|.|- |.||+++|+.+...|.+|+...+.
T Consensus       141 ~~L~gktvGIiG~-G~IG~~vA~~~~~fgm~V~~~d~~  177 (311)
T PRK08410        141 GEIKGKKWGIIGL-GTIGKRVAKIAQAFGAKVVYYSTS  177 (311)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhcCCEEEEECCC
Confidence            4799999999986 899999999999999997776653

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.06  E-value=0.12  Score=43.20  Aligned_cols=41  Identities=27%  Similarity=0.428  Sum_probs=35.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||.++|.|-|+-+|+.++..|.++|++|.+...+..
T Consensus       153 ~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~  193 (284)
T PRK14179        153 NVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTR  193 (284)
T ss_pred             CCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCC
Confidence            44789999999999999999999999999999777644333

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=95.03  E-value=0.53  Score=40.64  Aligned_cols=38  Identities=24%  Similarity=0.441  Sum_probs=31.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .|++++|.|+ +++|...++.+...|++|+++.+++++.
T Consensus       166 ~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~  203 (349)
T TIGR03201       166 KGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKL  203 (349)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHH
Confidence            4899999999 9999999988888899977776665543

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>cd05211 NAD_bind_Glu_Leu_Phe_Val NAD(P) binding domain of glutamate dehydrogenase, leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=95.01  E-value=0.092  Score=42.26  Aligned_cols=39  Identities=23%  Similarity=0.498  Sum_probs=34.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .+|+|++++|.| .|.+|+++++.|.+.|..++.+++...
T Consensus        19 ~~l~g~~vaIqG-fGnVG~~~a~~L~~~G~~vV~vsD~~g   57 (217)
T cd05211          19 DSLEGLTVAVQG-LGNVGWGLAKKLAEEGGKVLAVSDPDG   57 (217)
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEEcCCC
Confidence            468999999998 699999999999999999888888765

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NAD(P)+. This subfamily includes glutamate, leucine, phenylalanine, and valine DHs. Glutamate DH is a multi-domain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. As in other NAD+-dependent DHs, monomers in this family have 2 domains separated by a deep cleft. Here the c-terminal domain contains a modified NAD-binding Rossmann fold with 7 rather than the usual 6 beta strands and one strand anti-parral

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=94.96  E-value=0.15  Score=43.14  Aligned_cols=79  Identities=20%  Similarity=0.302  Sum_probs=49.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+.+++|+|+++++|..+++.+...|++|+.+.+..+.. +.+.+ ....  ..  .|..+.+..+.+.+ ... ..++|
T Consensus       142 ~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~-~~~~~-~g~~--~~--~~~~~~~~~~~~~~-~~~-~~~~d  213 (324)
T cd08244         142 PGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKT-ALVRA-LGAD--VA--VDYTRPDWPDQVRE-ALG-GGGVT  213 (324)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-cCCC--EE--EecCCccHHHHHHH-HcC-CCCce
Confidence            478999999999999999999999999987777665543 33322 2211  12  23333322232221 111 12599


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      .++++.|
T Consensus       214 ~vl~~~g  220 (324)
T cd08244         214 VVLDGVG  220 (324)
T ss_pred             EEEECCC
Confidence            9999876

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated

Probab=94.95  E-value=0.25  Score=43.50  Aligned_cols=73  Identities=15%  Similarity=0.235  Sum_probs=51.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ..|+++|+|++ .+|+.+++.+.+.|++|+++...+........+       .++..|..|.+.+.+++++.     ++|
T Consensus        11 ~~~~ilIiG~g-~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad-------~~~~~~~~d~~~l~~~~~~~-----~id   77 (395)
T PRK09288         11 SATRVMLLGSG-ELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH-------RSHVIDMLDGDALRAVIERE-----KPD   77 (395)
T ss_pred             CCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh-------heEECCCCCHHHHHHHHHHh-----CCC
Confidence            45799999875 689999999999999988887765433222211       24667888887776666532     689


Q ss_pred             EEEEcC
Q 041914           94 IMFSNA   99 (264)
Q Consensus        94 ~lv~~a   99 (264)
                      .++...
T Consensus        78 ~vi~~~   83 (395)
T PRK09288         78 YIVPEI   83 (395)
T ss_pred             EEEEee
Confidence            887543

>PRK05597 molybdopterin biosynthesis protein MoeB; Validated

Probab=94.94  E-value=0.24  Score=43.01  Aligned_cols=36  Identities=22%  Similarity=0.358  Sum_probs=30.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      ..+|+.++|+|.|+ ||+|..+++.|+..|..-+.+.
T Consensus        23 q~~L~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lv   58 (355)
T PRK05597         23 QQSLFDAKVAVIGA-GGLGSPALLYLAGAGVGHITII   58 (355)
T ss_pred             HHHHhCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            34588899999987 8999999999999999755543

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=94.92  E-value=0.64  Score=39.98  Aligned_cols=88  Identities=17%  Similarity=0.231  Sum_probs=53.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH------HHHhhhCCCcEEEEEecCCCHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR------QVATSIGVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~------~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ..+.|+++.|.|. |.||+++|+.|...|.+|++..+.......      .+.+.+....+.++.+-.+.. ...-+-++
T Consensus       142 ~~l~g~~VgIIG~-G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~~~~~~~l~ell~~aDiVil~lP~t~~-t~~li~~~  219 (330)
T PRK12480        142 KPVKNMTVAIIGT-GRIGAATAKIYAGFGATITAYDAYPNKDLDFLTYKDSVKEAIKDADIISLHVPANKE-SYHLFDKA  219 (330)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCChhHhhhhhhccCCHHHHHhcCCEEEEeCCCcHH-HHHHHhHH
Confidence            4689999999975 779999999999999998877766543211      122223334556666655532 11112223


Q ss_pred             HHHhcCCccEEEEcCCC
Q 041914           85 TVQNYGQLDIMFSNAGI  101 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~  101 (264)
                      ..+.. +.+.++.|++-
T Consensus       220 ~l~~m-k~gavlIN~aR  235 (330)
T PRK12480        220 MFDHV-KKGAILVNAAR  235 (330)
T ss_pred             HHhcC-CCCcEEEEcCC
Confidence            33322 34566666654

>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate

Probab=94.87  E-value=0.063  Score=38.88  Aligned_cols=34  Identities=21%  Similarity=0.397  Sum_probs=26.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCch
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADIQD   50 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~   50 (264)
                      ++.|+||+|-+|..+++.|.++ ..+++.+.++..
T Consensus         1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~   35 (121)
T PF01118_consen    1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSR   35 (121)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTT
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeecc
Confidence            5789999999999999999996 445555555444

This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=94.85  E-value=0.38  Score=42.75  Aligned_cols=39  Identities=28%  Similarity=0.368  Sum_probs=33.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+.|++++|.|. |.||+.+++.|...|++|+++.+.+..
T Consensus       209 ~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~r  247 (425)
T PRK05476        209 LIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPIC  247 (425)
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchh
Confidence            478999999996 799999999999999997776665544

>PRK07574 formate dehydrogenase; Provisional

Probab=94.77  E-value=0.11  Score=45.60  Aligned_cols=39  Identities=21%  Similarity=0.250  Sum_probs=33.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||++.|.|. |.||+++++.|...|.+|+...|..
T Consensus       187 ~~~L~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~  225 (385)
T PRK07574        187 SYDLEGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHR  225 (385)
T ss_pred             ceecCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCC
Confidence            45799999999987 7799999999999999977776654

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=94.74  E-value=0.2  Score=42.45  Aligned_cols=80  Identities=15%  Similarity=0.258  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||.|+++++|.++++.....|++++++.+..+.. +.+.+ ..- . .++  +..+. +..+.+.+.... .++|
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~-~~~~~-~g~-~-~~~--~~~~~-~~~~~i~~~~~~-~~~d  210 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGV-AELRA-LGI-G-PVV--STEQP-GWQDKVREAAGG-APIS  210 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHH-HHHHh-cCC-C-EEE--cCCCc-hHHHHHHHHhCC-CCCc
Confidence            578999999999999999998888999988887766554 33332 221 1 222  22222 222222222211 2599


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      +++.+.|.
T Consensus       211 ~v~d~~g~  218 (324)
T cd08292         211 VALDSVGG  218 (324)
T ss_pred             EEEECCCC
Confidence            99988773

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases

Probab=94.70  E-value=0.35  Score=41.24  Aligned_cols=115  Identities=11%  Similarity=0.083  Sum_probs=65.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++.|+|+ |.+|.+++..|+..|.  +++++..+.+.......+....    ....+...  .|.+.           
T Consensus         3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~--~dy~~-----------   68 (312)
T cd05293           3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEAD--KDYSV-----------   68 (312)
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEEC--CCHHH-----------
Confidence            357899996 9999999999998865  3455544443332222222111    11111111  12211           


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ..+.|++|.++|....+     ..+.   .+.+..|+    .+++.+.+.+.+...++.+++++.-.
T Consensus        69 ~~~adivvitaG~~~k~-----g~~R---~dll~~N~----~i~~~~~~~i~~~~p~~~vivvsNP~  123 (312)
T cd05293          69 TANSKVVIVTAGARQNE-----GESR---LDLVQRNV----DIFKGIIPKLVKYSPNAILLVVSNPV  123 (312)
T ss_pred             hCCCCEEEECCCCCCCC-----CCCH---HHHHHHHH----HHHHHHHHHHHHhCCCcEEEEccChH
Confidence            12789999999975321     1333   34455554    45666666667766577888887543

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=94.69  E-value=0.21  Score=42.81  Aligned_cols=37  Identities=22%  Similarity=0.307  Sum_probs=32.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++++||.|+++++|..+++.....|++++++.+..+
T Consensus       146 ~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~  182 (341)
T cd08290         146 PGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRP  182 (341)
T ss_pred             CCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCC
Confidence            5899999999999999999999999999888887653

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]

Probab=94.69  E-value=0.82  Score=38.82  Aligned_cols=154  Identities=15%  Similarity=0.152  Sum_probs=79.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc--EEEEecCchhhHHHHHhhhCC-CcE----EEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR--MIVIADIQDELGRQVATSIGV-GKC----HYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++|.|+|+ |++|.+++..|+.++..  ++++... ++..+.....+.+ ...    ..+..| .+.+           .
T Consensus         1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~-~~~~~G~a~DL~~~~~~~~~~~~i~~~-~~y~-----------~   66 (313)
T COG0039           1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDIN-EEKAEGVALDLSHAAAPLGSDVKITGD-GDYE-----------D   66 (313)
T ss_pred             CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcc-cccccchhcchhhcchhccCceEEecC-CChh-----------h
Confidence            46889999 99999999999887554  4445544 3322222211111 011    112222 1111           1


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC--------CCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS--------CGG  160 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~--------~~~  160 (264)
                      +.+-|++|..||...-+.     .+   -.+.++.|..    +.+.+.+.+.+...++.++.++.-...        .+.
T Consensus        67 ~~~aDiVvitAG~prKpG-----mt---R~DLl~~Na~----I~~~i~~~i~~~~~d~ivlVvtNPvD~~ty~~~k~sg~  134 (313)
T COG0039          67 LKGADIVVITAGVPRKPG-----MT---RLDLLEKNAK----IVKDIAKAIAKYAPDAIVLVVTNPVDILTYIAMKFSGF  134 (313)
T ss_pred             hcCCCEEEEeCCCCCCCC-----CC---HHHHHHhhHH----HHHHHHHHHHhhCCCeEEEEecCcHHHHHHHHHHhcCC
Confidence            137899999998754321     23   3455666664    445555555665545677776654432        112


Q ss_pred             CCCc-hhhchHHHHHHHHHHHHHHhCc--CCceEEEee
Q 041914          161 KRRT-DYHMSKHAVIGLVRSASVQLGV--HGIRVNCVS  195 (264)
Q Consensus       161 ~~~~-~y~~sK~al~~~~~~la~e~~~--~~i~v~~v~  195 (264)
                      |... .-..+..-..-|-..++.++.-  ..|+...|-
T Consensus       135 p~~rvig~gt~LDsaR~~~~lae~~~v~~~~V~~~ViG  172 (313)
T COG0039         135 PKNRVIGSGTVLDSARFRTFLAEKLGVSPKDVHAYVIG  172 (313)
T ss_pred             CccceecccchHHHHHHHHHHHHHhCCChhHceeeEec
Confidence            2222 2223333344455566666532  345555443

>PRK14968 putative methyltransferase; Provisional

Probab=94.66  E-value=0.49  Score=36.67  Aligned_cols=119  Identities=13%  Similarity=0.190  Sum_probs=61.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCc--EEEEEecCCCHHHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGK--CHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++++|-.|+..|.   ++..+++.+.+++.+..+++.. +...+..   ....  +.++.+|+.+.         +.+
T Consensus        22 ~~~~~vLd~G~G~G~---~~~~l~~~~~~v~~~D~s~~~~-~~a~~~~~~~~~~~~~~~~~~~d~~~~---------~~~   88 (188)
T PRK14968         22 KKGDRVLEVGTGSGI---VAIVAAKNGKKVVGVDINPYAV-ECAKCNAKLNNIRNNGVEVIRSDLFEP---------FRG   88 (188)
T ss_pred             cCCCEEEEEccccCH---HHHHHHhhcceEEEEECCHHHH-HHHHHHHHHcCCCCcceEEEecccccc---------ccc
Confidence            367889999976555   4555555588866666554433 3222221   1112  77888887542         111


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHH---HHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG---MAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~---~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                        ..+|.++.|.+.....  +.... .+.+...+..+..+   .-.+++.+.+.|+.   .|.++++.
T Consensus        89 --~~~d~vi~n~p~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~Lk~---gG~~~~~~  148 (188)
T PRK14968         89 --DKFDVILFNPPYLPTE--EEEEW-DDWLNYALSGGKDGREVIDRFLDEVGRYLKP---GGRILLLQ  148 (188)
T ss_pred             --cCceEEEECCCcCCCC--chhhh-hhhhhhhhccCcChHHHHHHHHHHHHHhcCC---CeEEEEEE
Confidence              2689999988765432  11111 11222222222111   23356666777765   45665543

>PRK13243 glyoxylate reductase; Reviewed

Probab=94.65  E-value=0.29  Score=42.16  Aligned_cols=39  Identities=26%  Similarity=0.329  Sum_probs=33.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .+|.||++.|.|- |.||+.+|+.|...|.+|++..+...
T Consensus       146 ~~L~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~  184 (333)
T PRK13243        146 YDVYGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRK  184 (333)
T ss_pred             cCCCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            5799999999998 99999999999999999776666543

>PLN02827 Alcohol dehydrogenase-like

Probab=94.62  E-value=0.35  Score=42.39  Aligned_cols=80  Identities=21%  Similarity=0.311  Sum_probs=46.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH-HHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE-CQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~~i   92 (264)
                      .|.++||.|+ |++|...++.....|+..+++....++..+.+. .+...  .+  .|..+. +...+.+.++..  +.+
T Consensus       193 ~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~-~lGa~--~~--i~~~~~~~~~~~~v~~~~~--~g~  264 (378)
T PLN02827        193 KGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAK-TFGVT--DF--INPNDLSEPIQQVIKRMTG--GGA  264 (378)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCc--EE--EcccccchHHHHHHHHHhC--CCC
Confidence            5899999985 999999998888889864444433333323332 22211  12  233321 233333333322  369


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.+.|.
T Consensus       265 d~vid~~G~  273 (378)
T PLN02827        265 DYSFECVGD  273 (378)
T ss_pred             CEEEECCCC
Confidence            999999873

>PRK08223 hypothetical protein; Validated

Probab=94.62  E-value=0.2  Score=41.91  Aligned_cols=38  Identities=26%  Similarity=0.378  Sum_probs=31.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      ..+|+..+|+|.|+ ||+|..+++.|+..|..-+.+.+.
T Consensus        22 Q~kL~~s~VlIvG~-GGLGs~va~~LA~aGVG~i~lvD~   59 (287)
T PRK08223         22 QQRLRNSRVAIAGL-GGVGGIHLLTLARLGIGKFTIADF   59 (287)
T ss_pred             HHHHhcCCEEEECC-CHHHHHHHHHHHHhCCCeEEEEeC
Confidence            34578899999976 699999999999999976665543

>cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins

Probab=94.61  E-value=0.41  Score=35.61  Aligned_cols=29  Identities=24%  Similarity=0.383  Sum_probs=23.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      +++|.|+ ||+|.++++.|++.|..-+.+.
T Consensus         1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~iv   29 (143)
T cd01483           1 RVLLVGL-GGLGSEIALNLARSGVGKITLI   29 (143)
T ss_pred             CEEEECC-CHHHHHHHHHHHHCCCCEEEEE
Confidence            3678886 9999999999999999634443

This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS.

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.61  E-value=0.088  Score=44.02  Aligned_cols=41  Identities=22%  Similarity=0.329  Sum_probs=35.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||+++|.|.|.-+|+.++..|.++|++|.++.++..
T Consensus       153 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~  193 (285)
T PRK14189        153 GIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTR  193 (285)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCC
Confidence            34789999999999999999999999999999877655433

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.56  E-value=0.092  Score=43.74  Aligned_cols=40  Identities=18%  Similarity=0.274  Sum_probs=34.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..+++||.++|.|.|.-+|+.++..|.++|++|.+..+..
T Consensus       152 ~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T  191 (281)
T PRK14183        152 EIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFT  191 (281)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCC
Confidence            4478999999999999999999999999999977554443

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.55  E-value=0.1  Score=43.57  Aligned_cols=41  Identities=15%  Similarity=0.168  Sum_probs=35.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||+++|.|-|.-+|+.++..|.++|++|.++.++..
T Consensus       154 ~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~  194 (285)
T PRK10792        154 GIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK  194 (285)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC
Confidence            34789999999999999999999999999999877766543

>PRK06223 malate dehydrogenase; Reviewed

Probab=94.54  E-value=0.44  Score=40.46  Aligned_cols=154  Identities=14%  Similarity=0.150  Sum_probs=78.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEE--EEecC-CCHHHHHHHHHHHHHhcCC
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHY--VHCDV-TNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~--~~~D~-s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++.|.|+ |.+|..++..++..|. +++++..+.+.......+.........  ..... +|.       +.    ..+
T Consensus         3 ~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-------~~----~~~   70 (307)
T PRK06223          3 KKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-------ED----IAG   70 (307)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-------HH----HCC
Confidence            47889998 9999999999999864 777776655443222211111100000  01111 111       11    136


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC--------CCCCCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS--------CGGKRR  163 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~--------~~~~~~  163 (264)
                      -|++|.++|.....     ..+   -.+.+..|+    .+.+.+.+.+.+....+.+|+++.....        .+.|..
T Consensus        71 aDiVii~~~~p~~~-----~~~---r~~~~~~n~----~i~~~i~~~i~~~~~~~~viv~tNP~d~~~~~~~~~s~~~~~  138 (307)
T PRK06223         71 SDVVVITAGVPRKP-----GMS---RDDLLGINA----KIMKDVAEGIKKYAPDAIVIVVTNPVDAMTYVALKESGFPKN  138 (307)
T ss_pred             CCEEEECCCCCCCc-----CCC---HHHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHHHhCCCcc
Confidence            79999999864321     122   233333444    4555566666655435667777644322        122223


Q ss_pred             chhhchHHHHH--HHHHHHHHHhC--cCCceEEEe
Q 041914          164 TDYHMSKHAVI--GLVRSASVQLG--VHGIRVNCV  194 (264)
Q Consensus       164 ~~y~~sK~al~--~~~~~la~e~~--~~~i~v~~v  194 (264)
                      -..+.. ..++  .|-+.+++.+.  +..|+...+
T Consensus       139 ~viG~g-t~lds~r~~~~la~~l~v~~~~v~~~vi  172 (307)
T PRK06223        139 RVIGMA-GVLDSARFRTFIAEELNVSVKDVTAFVL  172 (307)
T ss_pred             cEEEeC-CCcHHHHHHHHHHHHhCcChhhCcccEE
Confidence            333433 2333  55666776653  334554444

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=94.53  E-value=0.29  Score=41.37  Aligned_cols=38  Identities=18%  Similarity=0.251  Sum_probs=33.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+.+++|.|+++++|.++++.+...|++++++.+..++
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~  175 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQ  175 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHH
Confidence            57899999999999999999999999998887777654

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=94.52  E-value=0.34  Score=41.57  Aligned_cols=79  Identities=14%  Similarity=0.213  Sum_probs=48.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ..|.++||+|+ +++|..+++.+...|++ |+++.+++++. +.+. .+...  .+  .|..+.+ .+++.+ +.. ...
T Consensus       162 ~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~-~~~~-~~ga~--~~--i~~~~~~-~~~~~~-~~~-~~~  231 (339)
T cd08239         162 SGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERL-ELAK-ALGAD--FV--INSGQDD-VQEIRE-LTS-GAG  231 (339)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH-HhCCC--EE--EcCCcch-HHHHHH-HhC-CCC
Confidence            35899999986 89999999988889999 77766655443 3222 22211  12  2333333 332222 211 126


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.+.|.
T Consensus       232 ~d~vid~~g~  241 (339)
T cd08239         232 ADVAIECSGN  241 (339)
T ss_pred             CCEEEECCCC
Confidence            9999988773

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PRK00048 dihydrodipicolinate reductase; Provisional

Probab=94.52  E-value=0.21  Score=41.36  Aligned_cols=165  Identities=10%  Similarity=0.075  Sum_probs=91.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHH-----------HHHhhhCCCcEEEEEecCCCHHHHHHHHHH
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADIQDELGR-----------QVATSIGVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ++.|+|++|.+|+.+++.+.+. +.+++.+.++..+...           .+.+.+..  + =+-.|++.++.....+..
T Consensus         3 kV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~~~~~i~~~~dl~~ll~~--~-DvVid~t~p~~~~~~~~~   79 (257)
T PRK00048          3 KVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQGALGVAITDDLEAVLAD--A-DVLIDFTTPEATLENLEF   79 (257)
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccCCCCccccCCHHHhccC--C-CEEEECCCHHHHHHHHHH
Confidence            6889999999999999988864 6777766654432211           11111111  1 145678888887777776


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHH----------HhhHHH----HHHHHHHHHHHHHHcCCCCcEEEE
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL----------FAINVR----GMAACVKHAARVMVEGGVRGSIVC  150 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~----------~~~n~~----~~~~l~~~~l~~~~~~~~~~~iv~  150 (264)
                      ..+.  ++++++-..|..           .++.+++          +..|+.    -...+++.+.+.+.     .  -.
T Consensus        80 al~~--G~~vvigttG~s-----------~~~~~~l~~aa~~~~v~~s~n~s~g~~~~~~l~~~aa~~l~-----~--~d  139 (257)
T PRK00048         80 ALEH--GKPLVIGTTGFT-----------EEQLAELEEAAKKIPVVIAPNFSIGVNLLMKLAEKAAKYLG-----D--YD  139 (257)
T ss_pred             HHHc--CCCEEEECCCCC-----------HHHHHHHHHHhcCCCEEEECcchHHHHHHHHHHHHHHHhcC-----C--CC
Confidence            6665  678886544432           2222222          222333    33334444443331     1  11


Q ss_pred             ecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHh-------------C--cCCceEEEeeCCcccCccc
Q 041914          151 TASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL-------------G--VHGIRVNCVSPHGLATPLT  204 (264)
Q Consensus       151 iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~-------------~--~~~i~v~~v~pG~v~t~~~  204 (264)
                      +.=+..++..+-..+-+.++.-.+.+.+.....+             .  +.+|.+.++.-|.+..+..
T Consensus       140 ~ei~E~HH~~K~DaPSGTA~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~R~g~~~g~h~  208 (257)
T PRK00048        140 IEIIEAHHRHKVDAPSGTALKLAEAIAEARGRDLKEVAVYGREGATGARVKGEIGIHSVRGGDIVGEHE  208 (257)
T ss_pred             EEEEEccCCCCCCCCCHHHHHHHHHHHHhhcccccccceeccCCccCCcCCCCccEEEEEcCCceEEEE
Confidence            1112334444555556777777666666543211             0  1368899998887776643

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.52  E-value=0.096  Score=43.69  Aligned_cols=42  Identities=19%  Similarity=0.355  Sum_probs=36.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..+++||.++|.|-|.-+|+.++..|.++|++|.++.+...+
T Consensus       153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~d  194 (282)
T PRK14180        153 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTD  194 (282)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCC
Confidence            347899999999999999999999999999997777665443

>PRK06487 glycerate dehydrogenase; Provisional

Probab=94.52  E-value=0.28  Score=41.98  Aligned_cols=37  Identities=30%  Similarity=0.374  Sum_probs=32.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .++.||++.|.|- |.||+++++.+...|.+|+...+.
T Consensus       144 ~~l~gktvgIiG~-G~IG~~vA~~l~~fgm~V~~~~~~  180 (317)
T PRK06487        144 VELEGKTLGLLGH-GELGGAVARLAEAFGMRVLIGQLP  180 (317)
T ss_pred             cccCCCEEEEECC-CHHHHHHHHHHhhCCCEEEEECCC
Confidence            4689999999997 999999999999999997766654

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=94.52  E-value=0.34  Score=42.45  Aligned_cols=75  Identities=17%  Similarity=0.367  Sum_probs=46.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|++++|.|+ +++|...++.....|++|+++.+.+++..+.+ +.+..+  +++  |..+.+.+       .+..+.+|
T Consensus       178 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a-~~lGa~--~~i--~~~~~~~v-------~~~~~~~D  244 (375)
T PLN02178        178 SGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAI-DRLGAD--SFL--VTTDSQKM-------KEAVGTMD  244 (375)
T ss_pred             CCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHH-HhCCCc--EEE--cCcCHHHH-------HHhhCCCc
Confidence            5889999986 89999999888888999777776655432322 222211  122  33332222       22224689


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.+.|.
T Consensus       245 ~vid~~G~  252 (375)
T PLN02178        245 FIIDTVSA  252 (375)
T ss_pred             EEEECCCc
Confidence            99998763

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.49  E-value=0.11  Score=43.33  Aligned_cols=40  Identities=15%  Similarity=0.319  Sum_probs=34.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..+++||+++|.|-|.-+|+.++..|.++|++|.++..+.
T Consensus       153 ~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t  192 (284)
T PRK14190        153 NIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKT  192 (284)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCc
Confidence            3478999999999999999999999999999977765443

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=94.47  E-value=0.25  Score=41.99  Aligned_cols=78  Identities=15%  Similarity=0.368  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+.+++|.|+++++|.++++.....|++|+.+.+..+.. ..+.+ ....  .++  |..+. +..+.+.+...  ..+|
T Consensus       139 ~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~-~g~~--~v~--~~~~~-~~~~~~~~~~~--~~vd  209 (329)
T cd08250         139 SGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKA-EFLKS-LGCD--RPI--NYKTE-DLGEVLKKEYP--KGVD  209 (329)
T ss_pred             CCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHH-HHHHH-cCCc--eEE--eCCCc-cHHHHHHHhcC--CCCe
Confidence            578999999999999999988888999987777665443 33322 2211  122  22222 22222222222  3689


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      .++++.|
T Consensus       210 ~v~~~~g  216 (329)
T cd08250         210 VVYESVG  216 (329)
T ss_pred             EEEECCc
Confidence            9998766

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.47  E-value=0.1  Score=43.67  Aligned_cols=42  Identities=19%  Similarity=0.309  Sum_probs=36.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..+++||+++|.|.|.-+|+.++..|.++|++|.++.++..+
T Consensus       150 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~  191 (287)
T PRK14173        150 GIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQD  191 (287)
T ss_pred             CCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCC
Confidence            347899999999999999999999999999997776655443

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=94.46  E-value=0.42  Score=41.63  Aligned_cols=79  Identities=19%  Similarity=0.283  Sum_probs=47.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|.++||+|+ +++|...++.+...|+ +|+.+.++.++. +.+. .+...  ..  .|..+ .+.+.+.+.++..  +.
T Consensus       185 ~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~-~~a~-~~Ga~--~~--i~~~~~~~~~~~~v~~~~~--~g  255 (368)
T TIGR02818       185 EGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKF-ELAK-KLGAT--DC--VNPNDYDKPIQEVIVEITD--GG  255 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH-HhCCC--eE--EcccccchhHHHHHHHHhC--CC
Confidence            4889999985 9999999988888898 566665655443 3222 22221  12  23332 2223333333322  36


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       256 ~d~vid~~G~  265 (368)
T TIGR02818       256 VDYSFECIGN  265 (368)
T ss_pred             CCEEEECCCC
Confidence            9999999873

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed

Probab=94.45  E-value=0.26  Score=44.25  Aligned_cols=77  Identities=19%  Similarity=0.242  Sum_probs=55.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +..++++|.|+ |.+|+.+++.|.+.|.+|+++.++++.. +.+.+..  ..+.++..|.++.+.++++-      ..+.
T Consensus       229 ~~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~-~~~~~~~--~~~~~i~gd~~~~~~L~~~~------~~~a  298 (453)
T PRK09496        229 KPVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERA-EELAEEL--PNTLVLHGDGTDQELLEEEG------IDEA  298 (453)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-HHHHHHC--CCCeEEECCCCCHHHHHhcC------CccC
Confidence            55789999999 9999999999999999988887765543 3333322  13567889999887765432      1367


Q ss_pred             cEEEEcC
Q 041914           93 DIMFSNA   99 (264)
Q Consensus        93 d~lv~~a   99 (264)
                      |.+|.+.
T Consensus       299 ~~vi~~~  305 (453)
T PRK09496        299 DAFIALT  305 (453)
T ss_pred             CEEEECC
Confidence            8777543

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=94.44  E-value=0.19  Score=39.41  Aligned_cols=37  Identities=32%  Similarity=0.463  Sum_probs=33.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      .+++||+++|.|-|.-+|+.++..|.++|++|.++..
T Consensus        58 ~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~   94 (197)
T cd01079          58 NRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDI   94 (197)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEec
Confidence            4799999999999999999999999999999776643

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>cd08230 glucose_DH Glucose dehydrogenase

Probab=94.43  E-value=0.28  Score=42.45  Aligned_cols=75  Identities=20%  Similarity=0.383  Sum_probs=46.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc--hhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ--DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..|++++|+|+ |++|...++.+...|++|+++.++.  ++..+ +.+.+..   ..  .|..+. ...+    . ...+
T Consensus       171 ~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~-~~~~~Ga---~~--v~~~~~-~~~~----~-~~~~  237 (355)
T cd08230         171 WNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKAD-IVEELGA---TY--VNSSKT-PVAE----V-KLVG  237 (355)
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHH-HHHHcCC---EE--ecCCcc-chhh----h-hhcC
Confidence            36889999985 9999999988888899988777742  22222 2233322   12  233322 1111    1 1124


Q ss_pred             CccEEEEcCC
Q 041914           91 QLDIMFSNAG  100 (264)
Q Consensus        91 ~id~lv~~ag  100 (264)
                      .+|++|.+.|
T Consensus       238 ~~d~vid~~g  247 (355)
T cd08230         238 EFDLIIEATG  247 (355)
T ss_pred             CCCEEEECcC
Confidence            7899999987

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=94.38  E-value=0.32  Score=42.16  Aligned_cols=79  Identities=20%  Similarity=0.283  Sum_probs=45.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++||.|+ +++|...++.....|++ |+.+.+++++. +.+. ....+  .++  |..+.+..+.+ .+.... ..+
T Consensus       176 ~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~-~~~~-~~Ga~--~~i--~~~~~~~~~~i-~~~~~~-~g~  246 (358)
T TIGR03451       176 RGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKL-EWAR-EFGAT--HTV--NSSGTDPVEAI-RALTGG-FGA  246 (358)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH-HcCCc--eEE--cCCCcCHHHHH-HHHhCC-CCC
Confidence            4889999985 99999999888888996 55555554432 3332 22221  222  33332222222 211111 258


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.+.|.
T Consensus       247 d~vid~~g~  255 (358)
T TIGR03451       247 DVVIDAVGR  255 (358)
T ss_pred             CEEEECCCC
Confidence            999998873

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=94.37  E-value=0.11  Score=39.50  Aligned_cols=39  Identities=31%  Similarity=0.378  Sum_probs=33.7

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      -+-..+++||+++|.|| |.+|...++.|.+.|++|.+++
T Consensus         5 ~P~~l~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs   43 (157)
T PRK06719          5 YPLMFNLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS   43 (157)
T ss_pred             cceEEEcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence            34456899999999997 7799999999999999988885

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=94.35  E-value=0.44  Score=40.94  Aligned_cols=75  Identities=25%  Similarity=0.455  Sum_probs=47.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+++|+|+++++|.++++.....|++|+.+.+. + ..+ +.+.....  ..  .|..+.+....    +.. .+.+|
T Consensus       162 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~-~~~-~~~~~g~~--~~--~~~~~~~~~~~----l~~-~~~vd  229 (350)
T cd08248         162 AGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-D-AIP-LVKSLGAD--DV--IDYNNEDFEEE----LTE-RGKFD  229 (350)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-c-hHH-HHHHhCCc--eE--EECCChhHHHH----HHh-cCCCC
Confidence            48999999999999999999888899997777654 2 222 22222211  12  23333322222    222 24699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      .++.+.|
T Consensus       230 ~vi~~~g  236 (350)
T cd08248         230 VILDTVG  236 (350)
T ss_pred             EEEECCC
Confidence            9998876

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=94.34  E-value=0.22  Score=38.10  Aligned_cols=83  Identities=16%  Similarity=0.129  Sum_probs=51.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh----CC-----CcEEEEEecCCCHHHHHHHHHH--
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GV-----GKCHYVHCDVTNECQVKALVDS--   84 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~D~s~~~~~~~~~~~--   84 (264)
                      +++-+.|- |-+|..+++.|+++|++|.+..|+.++. +.+.+..    ..     ....++-.=+.+.++++.++..  
T Consensus         2 ~~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~-~~~~~~g~~~~~s~~e~~~~~dvvi~~v~~~~~v~~v~~~~~   79 (163)
T PF03446_consen    2 MKIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKA-EALAEAGAEVADSPAEAAEQADVVILCVPDDDAVEAVLFGEN   79 (163)
T ss_dssp             BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHH-HHHHHTTEEEESSHHHHHHHBSEEEE-SSSHHHHHHHHHCTT
T ss_pred             CEEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhh-hhhHHhhhhhhhhhhhHhhcccceEeecccchhhhhhhhhhH
Confidence            35667776 8999999999999999976666555444 3333221    01     1334566668888899998887  


Q ss_pred             HHHhcCCccEEEEcCC
Q 041914           85 TVQNYGQLDIMFSNAG  100 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag  100 (264)
                      +.....+=.++|.+..
T Consensus        80 i~~~l~~g~iiid~sT   95 (163)
T PF03446_consen   80 ILAGLRPGKIIIDMST   95 (163)
T ss_dssp             HGGGS-TTEEEEE-SS
T ss_pred             HhhccccceEEEecCC
Confidence            6655444456665543

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional

Probab=94.33  E-value=0.14  Score=44.18  Aligned_cols=34  Identities=9%  Similarity=0.275  Sum_probs=27.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcE---EEEecCc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARM---IVIADIQ   49 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v---~~~~~~~   49 (264)
                      .+++|.||+|.+|+++++.|.++++.+   ..+.+..
T Consensus         2 ~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~   38 (334)
T PRK14874          2 YNVAVVGATGAVGREMLNILEERNFPVDKLRLLASAR   38 (334)
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccc
Confidence            579999999999999999999987763   4555543

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=94.31  E-value=0.38  Score=41.93  Aligned_cols=78  Identities=18%  Similarity=0.275  Sum_probs=48.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH-HHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE-CQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~~   91 (264)
                      .|.++||.|+ +++|...++.+...|+ .|+.+.++.++. +.+. .+..+  .+  .|..+. ++..+.+.++..  +.
T Consensus       186 ~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~-~~~~-~lGa~--~~--i~~~~~~~~~~~~v~~~~~--~g  256 (368)
T cd08300         186 PGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKF-ELAK-KFGAT--DC--VNPKDHDKPIQQVLVEMTD--GG  256 (368)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHH-HcCCC--EE--EcccccchHHHHHHHHHhC--CC
Confidence            5899999975 9999999988888999 466666665543 3222 22221  12  233332 234444444332  36


Q ss_pred             ccEEEEcCC
Q 041914           92 LDIMFSNAG  100 (264)
Q Consensus        92 id~lv~~ag  100 (264)
                      +|++|.+.|
T Consensus       257 ~d~vid~~g  265 (368)
T cd08300         257 VDYTFECIG  265 (368)
T ss_pred             CcEEEECCC
Confidence            999999877

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.30  E-value=0.12  Score=43.13  Aligned_cols=41  Identities=20%  Similarity=0.388  Sum_probs=35.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..+++||.++|.|-|.-+|+.++..|.++|++|.++.++..
T Consensus       153 ~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~  193 (278)
T PRK14172        153 NIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTK  193 (278)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCC
Confidence            34789999999999999999999999999999776665443

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.30  E-value=0.11  Score=43.28  Aligned_cols=42  Identities=19%  Similarity=0.316  Sum_probs=36.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..++.||+++|.|-|.-+|+.++..|.++|++|.++.++..+
T Consensus       154 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~  195 (284)
T PRK14177        154 GIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQN  195 (284)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            457899999999999999999999999999997776655443

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=94.28  E-value=0.26  Score=42.20  Aligned_cols=64  Identities=20%  Similarity=0.251  Sum_probs=44.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hH--------HHHHhhhCCCcEEEEEecCCCH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LG--------RQVATSIGVGKCHYVHCDVTNE   75 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~D~s~~   75 (264)
                      .++.||++-|.|. |.||+++++.+...|.+|+...+...+ ..        ..+.+.+....+..+.+-++++
T Consensus       138 ~el~gkTvGIiG~-G~IG~~va~~l~afgm~v~~~d~~~~~~~~~~~~~~~~~~Ld~lL~~sDiv~lh~PlT~e  210 (324)
T COG0111         138 TELAGKTVGIIGL-GRIGRAVAKRLKAFGMKVIGYDPYSPRERAGVDGVVGVDSLDELLAEADILTLHLPLTPE  210 (324)
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEECCCCchhhhccccceecccHHHHHhhCCEEEEcCCCCcc
Confidence            3688999999985 899999999999999997777762222 11        1133334444566666666654

>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1

Probab=94.28  E-value=0.26  Score=39.02  Aligned_cols=36  Identities=22%  Similarity=0.385  Sum_probs=29.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      ..|..++|+|.|+ +|+|.++++.|+..|..-+.+.+
T Consensus        17 ~~L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD   52 (197)
T cd01492          17 KRLRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILD   52 (197)
T ss_pred             HHHHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEE
Confidence            3577889999974 66999999999999998555543

Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.

>cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2

Probab=94.26  E-value=0.3  Score=41.52  Aligned_cols=30  Identities=27%  Similarity=0.358  Sum_probs=24.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      +|||.|+ ||+|.++++.|+..|..-+.+.+
T Consensus         1 kVlIVGa-GGlG~EiaKnLal~Gvg~ItIvD   30 (312)
T cd01489           1 KVLVVGA-GGIGCELLKNLVLTGFGEIHIID   30 (312)
T ss_pred             CEEEECC-CHHHHHHHHHHHHhcCCeEEEEc
Confidence            3788885 99999999999999998665544

UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2.

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.25  E-value=0.12  Score=43.12  Aligned_cols=40  Identities=25%  Similarity=0.378  Sum_probs=34.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||+++|.|-|.-+|+.++..|.++|++|.++....
T Consensus       159 ~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T  198 (287)
T PRK14176        159 GVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFT  198 (287)
T ss_pred             CCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccC
Confidence            3578999999999999999999999999999977666543

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=94.24  E-value=0.33  Score=42.19  Aligned_cols=74  Identities=18%  Similarity=0.369  Sum_probs=45.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||.|+ +++|..+++.....|++|+++..+.++..+... .....  .++  |..+.+.+.       +..+.+|
T Consensus       183 ~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~--~vi--~~~~~~~~~-------~~~~~~D  249 (360)
T PLN02586        183 PGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGAD--SFL--VSTDPEKMK-------AAIGTMD  249 (360)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCc--EEE--cCCCHHHHH-------hhcCCCC
Confidence            5889999775 999999998888889997777666554322222 22211  122  333332222       2224689


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|.+.|
T Consensus       250 ~vid~~g  256 (360)
T PLN02586        250 YIIDTVS  256 (360)
T ss_pred             EEEECCC
Confidence            9998877

>PLN02602 lactate dehydrogenase

Probab=94.22  E-value=0.65  Score=40.28  Aligned_cols=113  Identities=12%  Similarity=0.102  Sum_probs=64.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           16 KVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++.|+|+ |.+|.+++..|+..+.  +++++..+.+.......+....    ... -+..+ .+.       +.+    
T Consensus        38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~-~i~~~-~dy-------~~~----  103 (350)
T PLN02602         38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRT-KILAS-TDY-------AVT----  103 (350)
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCC-EEEeC-CCH-------HHh----
Confidence            69999996 9999999999998765  3455555443332222222111    111 12110 121       111    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      .+-|++|..||....+     ..+.   .+.+..|+    .+++.+.+.+.+...++.+++++.-
T Consensus       104 ~daDiVVitAG~~~k~-----g~tR---~dll~~N~----~I~~~i~~~I~~~~p~~ivivvtNP  156 (350)
T PLN02602        104 AGSDLCIVTAGARQIP-----GESR---LNLLQRNV----ALFRKIIPELAKYSPDTILLIVSNP  156 (350)
T ss_pred             CCCCEEEECCCCCCCc-----CCCH---HHHHHHHH----HHHHHHHHHHHHHCCCeEEEEecCc
Confidence            3779999999975321     1233   34444454    4566666666666557788888743

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=94.22  E-value=0.45  Score=38.94  Aligned_cols=36  Identities=22%  Similarity=0.432  Sum_probs=29.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      ..|++++|+|.|+ ||+|..+++.|++.|..-+.+.+
T Consensus        20 ~~L~~~~VlvvG~-GglGs~va~~La~~Gvg~i~lvD   55 (240)
T TIGR02355        20 EALKASRVLIVGL-GGLGCAASQYLAAAGVGNLTLLD   55 (240)
T ss_pred             HHHhCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEEe
Confidence            4578899999975 79999999999999987555544

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PF12076 Wax2_C: WAX2 C-terminal domain; InterPro: IPR021940 This presumed domain is functionally uncharacterised

Probab=94.20  E-value=0.1  Score=39.24  Aligned_cols=28  Identities=18%  Similarity=0.456  Sum_probs=26.3

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEE
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVI   45 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~   45 (264)
                      |+.+|+++.+|+++|..|.++|.+|+.+
T Consensus         1 V~L~G~~sKvaraiA~~LC~rgv~V~m~   28 (164)
T PF12076_consen    1 VFLTGNTSKVARAIALALCRRGVQVVML   28 (164)
T ss_pred             CeecccccHHHHHHHHHHHhcCCEEEEe
Confidence            5789999999999999999999998877

This domain is found in eukaryotes. This domain is about 170 amino acids in length. This domain is found associated with PF04116 from PFAM. This domain has a conserved LEGW sequence motif. This region has similarity to short chain dehydrogenases [].

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=94.18  E-value=0.31  Score=41.05  Aligned_cols=38  Identities=24%  Similarity=0.420  Sum_probs=33.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .|.+++|.|+++++|.++++.....|++|+.+.+..++
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~  179 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPER  179 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            57899999999999999999999999998777776544

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.16  E-value=0.13  Score=43.01  Aligned_cols=42  Identities=21%  Similarity=0.437  Sum_probs=35.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..++.||+++|.|-|.-+|+.++..|.++|++|.++..+..+
T Consensus       152 ~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~  193 (284)
T PRK14170        152 GTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKD  193 (284)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            347899999999999999999999999999997766555433

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.16  E-value=0.13  Score=42.87  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=35.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..+++||+++|.|-|.-+|+.++..|.++|++|.++.++..+
T Consensus       151 ~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~  192 (282)
T PRK14169        151 DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRN  192 (282)
T ss_pred             CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCC
Confidence            347899999999999999999999999999997766555433

>PLN02740 Alcohol dehydrogenase-like

Probab=94.11  E-value=0.4  Score=42.00  Aligned_cols=79  Identities=19%  Similarity=0.310  Sum_probs=47.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH-HHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE-CQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~~~~   91 (264)
                      .|+++||.|+ +++|...++.+...|+ +|+++.+.+++. +.+.+ +..  -.++  |..+. +...+.+.++..  +.
T Consensus       198 ~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~-~~a~~-~Ga--~~~i--~~~~~~~~~~~~v~~~~~--~g  268 (381)
T PLN02740        198 AGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKF-EKGKE-MGI--TDFI--NPKDSDKPVHERIREMTG--GG  268 (381)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHH-HHHHH-cCC--cEEE--ecccccchHHHHHHHHhC--CC
Confidence            5889999985 9999999988888899 466666655443 33322 221  1222  33322 123333333322  26


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.+.|.
T Consensus       269 ~dvvid~~G~  278 (381)
T PLN02740        269 VDYSFECAGN  278 (381)
T ss_pred             CCEEEECCCC
Confidence            9999999883

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.10  E-value=0.13  Score=43.19  Aligned_cols=41  Identities=17%  Similarity=0.302  Sum_probs=35.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+++||.++|.|-|.-+|+.++..|.++|++|.++.+...+
T Consensus       154 i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~  194 (297)
T PRK14186        154 IDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQD  194 (297)
T ss_pred             CCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            47899999999999999999999999999997777655443

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=94.05  E-value=0.43  Score=40.50  Aligned_cols=38  Identities=32%  Similarity=0.589  Sum_probs=32.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+.+++|.|+++++|..+++.+...|+.++++.+..+.
T Consensus       140 ~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~  177 (334)
T PTZ00354        140 KGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEK  177 (334)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHH
Confidence            57899999999999999999999999997776665443

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.04  E-value=0.13  Score=42.94  Aligned_cols=42  Identities=17%  Similarity=0.325  Sum_probs=35.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..+++||.++|.|-|.-+|+.++..|.++|++|.++.++..+
T Consensus       154 ~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~  195 (288)
T PRK14171        154 EPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHN  195 (288)
T ss_pred             CCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCC
Confidence            347899999999999999999999999999997766655443

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=94.04  E-value=1  Score=38.58  Aligned_cols=65  Identities=22%  Similarity=0.331  Sum_probs=44.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH--------HHhhhCCCcEEEEEecCCCH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ--------VATSIGVGKCHYVHCDVTNE   75 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~D~s~~   75 (264)
                      ..++.||++-|.| .|.||+++++.+...|.+|+...|+..+..+.        +.+.+....+..+.|-++..
T Consensus       141 ~~~l~gktvGIiG-~GrIG~avA~r~~~Fgm~v~y~~~~~~~~~~~~~~~~y~~l~ell~~sDii~l~~Plt~~  213 (324)
T COG1052         141 GFDLRGKTLGIIG-LGRIGQAVARRLKGFGMKVLYYDRSPNPEAEKELGARYVDLDELLAESDIISLHCPLTPE  213 (324)
T ss_pred             ccCCCCCEEEEEC-CCHHHHHHHHHHhcCCCEEEEECCCCChHHHhhcCceeccHHHHHHhCCEEEEeCCCChH
Confidence            4579999999998 58999999999998899977777765321111        22333334566666666643

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=94.04  E-value=0.7  Score=39.62  Aligned_cols=38  Identities=18%  Similarity=0.100  Sum_probs=31.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHH-HcCCcEEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFA-DHGARMIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~-~~g~~v~~~~~~   48 (264)
                      ..+|.||++.|.|- |.||+++++.+. ..|.+|+...+.
T Consensus       140 g~~L~gktvGIiG~-G~IG~~va~~l~~~fgm~V~~~~~~  178 (323)
T PRK15409        140 GTDVHHKTLGIVGM-GRIGMALAQRAHFGFNMPILYNARR  178 (323)
T ss_pred             cCCCCCCEEEEEcc-cHHHHHHHHHHHhcCCCEEEEECCC
Confidence            34789999999997 999999999997 789997765554

>PRK08655 prephenate dehydrogenase; Provisional

Probab=94.01  E-value=0.63  Score=41.70  Aligned_cols=35  Identities=29%  Similarity=0.475  Sum_probs=30.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ++.|.||+|.+|.++++.|.+.|.+|.+..|+.+.
T Consensus         2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~   36 (437)
T PRK08655          2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKK   36 (437)
T ss_pred             EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHH
Confidence            58999999999999999999999998887776544

>TIGR01915 npdG NADPH-dependent F420 reductase

Probab=93.99  E-value=0.15  Score=41.06  Aligned_cols=36  Identities=19%  Similarity=0.285  Sum_probs=31.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ++.|.||+|.+|.+++..|++.|++|.+..|+.+..
T Consensus         2 kI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~   37 (219)
T TIGR01915         2 KIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKA   37 (219)
T ss_pred             EEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHH
Confidence            588999999999999999999999988777765554

This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.

>PLN02494 adenosylhomocysteinase

Probab=93.97  E-value=0.64  Score=41.73  Aligned_cols=39  Identities=33%  Similarity=0.380  Sum_probs=32.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+.||+++|.|.. .||+.+++.+...|++|+++.+.+..
T Consensus       251 ~LaGKtVvViGyG-~IGr~vA~~aka~Ga~VIV~e~dp~r  289 (477)
T PLN02494        251 MIAGKVAVICGYG-DVGKGCAAAMKAAGARVIVTEIDPIC  289 (477)
T ss_pred             ccCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            3789999999975 99999999999999997776665543

>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent

Probab=93.97  E-value=0.76  Score=39.06  Aligned_cols=119  Identities=15%  Similarity=0.176  Sum_probs=63.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHH-HHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGR-QVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +++.|.|+ |.+|..+|..|+.+|. +|+++....+ ..+ ...+.............++-..+.+.    +    ..-|
T Consensus         2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~-l~~g~a~d~~~~~~~~~~~~~i~~t~d~~~----~----~~aD   71 (305)
T TIGR01763         2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEG-IPQGKALDMYEASPVGGFDTKVTGTNNYAD----T----ANSD   71 (305)
T ss_pred             CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCC-hhHHHHHhhhhhhhccCCCcEEEecCCHHH----h----CCCC
Confidence            46788897 8899999999999876 7677666433 322 21111111000000001110001111    1    2679


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ++|.++|.....     +.+   -.+.+..|+.-...+.+.+.++    ..++.+|+++.-..
T Consensus        72 iVIitag~p~~~-----~~s---R~~l~~~N~~iv~~i~~~I~~~----~p~~~iIv~tNP~d  122 (305)
T TIGR01763        72 IVVITAGLPRKP-----GMS---REDLLSMNAGIVREVTGRIMEH----SPNPIIVVVSNPLD  122 (305)
T ss_pred             EEEEcCCCCCCc-----CCC---HHHHHHHHHHHHHHHHHHHHHH----CCCeEEEEecCcHH
Confidence            999999974321     122   2335666666555555555443    32577888876544

The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.

>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases

Probab=93.96  E-value=3.5  Score=35.08  Aligned_cols=110  Identities=13%  Similarity=0.092  Sum_probs=63.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           17 VAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.|.|+ |.+|..++..|+.+|  .+++++.++.+.......+....    .......   .+.+       .    ..
T Consensus         2 kI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~i~~---~d~~-------~----l~   66 (308)
T cd05292           2 KVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVRIYA---GDYA-------D----CK   66 (308)
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHccccccCCeEEee---CCHH-------H----hC
Confidence            4788998 899999999999999  46666666654433233332211    1111111   1211       1    23


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      +.|++|.+++.....     ..   ...+.+..|+.    +++.+.+.+.+...++.+++++.
T Consensus        67 ~aDiViita~~~~~~-----~~---~r~dl~~~n~~----i~~~~~~~l~~~~~~giiiv~tN  117 (308)
T cd05292          67 GADVVVITAGANQKP-----GE---TRLDLLKRNVA----IFKEIIPQILKYAPDAILLVVTN  117 (308)
T ss_pred             CCCEEEEccCCCCCC-----CC---CHHHHHHHHHH----HHHHHHHHHHHHCCCeEEEEecC
Confidence            789999999875332     11   23444555554    45555555565554677777754

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=93.95  E-value=0.39  Score=40.21  Aligned_cols=38  Identities=18%  Similarity=0.338  Sum_probs=32.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .|++++|.|+++++|.++++.....|+.|+.+.+..+.
T Consensus       136 ~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~  173 (320)
T cd05286         136 PGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEK  173 (320)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHH
Confidence            58999999999999999999988999997777765544

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=93.84  E-value=0.55  Score=40.96  Aligned_cols=78  Identities=21%  Similarity=0.288  Sum_probs=45.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++||.|+ +++|...++.+...|++ |+++.+++++. +.+ +.+...  .+  .|..+.+..++ +.++.  .+.+
T Consensus       191 ~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~-~~a-~~~Ga~--~~--i~~~~~~~~~~-i~~~~--~~g~  260 (371)
T cd08281         191 PGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKL-ALA-RELGAT--AT--VNAGDPNAVEQ-VRELT--GGGV  260 (371)
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHH-HHH-HHcCCc--eE--eCCCchhHHHH-HHHHh--CCCC
Confidence            5789999985 89999998888888994 66665554443 322 222211  12  23333322222 22221  1368


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.+.|.
T Consensus       261 d~vid~~G~  269 (371)
T cd08281         261 DYAFEMAGS  269 (371)
T ss_pred             CEEEECCCC
Confidence            999998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=93.84  E-value=0.35  Score=41.00  Aligned_cols=39  Identities=21%  Similarity=0.407  Sum_probs=33.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .++++||.|+++++|..+++.....|++|+++.+..++.
T Consensus       146 ~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~  184 (326)
T cd08289         146 EQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAA  184 (326)
T ss_pred             CCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHH
Confidence            367999999999999999988888999987777766543

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases

Probab=93.80  E-value=2.2  Score=36.31  Aligned_cols=113  Identities=11%  Similarity=0.067  Sum_probs=65.8

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC------CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           18 AIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV------GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +.|.|+ |.+|..+|..|+.++.  +++++..+.+.......+....      ..+....   .|       .+.+    
T Consensus         2 i~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~---~~-------y~~~----   66 (307)
T cd05290           2 LVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA---GD-------YDDC----   66 (307)
T ss_pred             EEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE---CC-------HHHh----
Confidence            578888 9999999999998876  4555555443332222222221      1222222   22       2222    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .+-|++|..||....+     ..+. +-.+.++.|+    .+++...+.+.+...++.++++|.-.
T Consensus        67 ~~aDivvitaG~~~kp-----g~tr-~R~dll~~N~----~I~~~i~~~i~~~~p~~i~ivvsNPv  122 (307)
T cd05290          67 ADADIIVITAGPSIDP-----GNTD-DRLDLAQTNA----KIIREIMGNITKVTKEAVIILITNPL  122 (307)
T ss_pred             CCCCEEEECCCCCCCC-----CCCc-hHHHHHHHHH----HHHHHHHHHHHHhCCCeEEEEecCcH
Confidence            3679999999975321     1221 0234455554    46778888888877567777776544

L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=93.77  E-value=0.48  Score=42.02  Aligned_cols=39  Identities=21%  Similarity=0.232  Sum_probs=28.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC---cEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA---RMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~---~v~~~~~~~~~~   52 (264)
                      .|.+++|.|++|++|...++.+...|+   +|+++.+.+++.
T Consensus       175 ~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~  216 (410)
T cd08238         175 PGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERL  216 (410)
T ss_pred             CCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHH
Confidence            468999999999999998876666554   566666655543

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd01076 NAD_bind_1_Glu_DH NAD(P) binding domain of glutamate dehydrogenase, subgroup 1

Probab=93.76  E-value=0.31  Score=39.52  Aligned_cols=37  Identities=27%  Similarity=0.530  Sum_probs=32.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .++.+++++|.| .|.+|+.+++.|.+.|++|+.+++.
T Consensus        27 ~~l~~~~v~I~G-~G~VG~~~a~~L~~~g~~vv~v~D~   63 (227)
T cd01076          27 IGLAGARVAIQG-FGNVGSHAARFLHEAGAKVVAVSDS   63 (227)
T ss_pred             CCccCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECC
Confidence            458899999997 7999999999999999998877765

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. Glutamate DH is a multidomain enzyme that catalyzes the reaction from glutamate to 2-oxyoglutarate and ammonia in the presence of NAD or NADP. It is present in all organisms. Enzymes involved in ammonia assimilation are typically NADP+-dependent, while those involved in glutamate catabolism are generally NAD+-dependent. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids

>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]

Probab=93.76  E-value=1.2  Score=35.63  Aligned_cols=47  Identities=26%  Similarity=0.370  Sum_probs=36.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA   57 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   57 (264)
                      ..+++||.+||+|| |..|..=++.|++.|++|++++....+......
T Consensus         7 ~~~l~~k~VlvvGg-G~va~rKa~~ll~~ga~v~Vvs~~~~~el~~~~   53 (210)
T COG1648           7 FLDLEGKKVLVVGG-GSVALRKARLLLKAGADVTVVSPEFEPELKALI   53 (210)
T ss_pred             EEEcCCCEEEEECC-CHHHHHHHHHHHhcCCEEEEEcCCccHHHHHHH
Confidence            45789999999997 567888899999999999888877644333333

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=93.75  E-value=0.3  Score=43.80  Aligned_cols=41  Identities=22%  Similarity=0.315  Sum_probs=33.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ...+.||+++|.|.+ .||+.+++.|...|++|+++.+.+..
T Consensus       249 ~~~LaGKtVgVIG~G-~IGr~vA~rL~a~Ga~ViV~e~dp~~  289 (476)
T PTZ00075        249 DVMIAGKTVVVCGYG-DVGKGCAQALRGFGARVVVTEIDPIC  289 (476)
T ss_pred             CCCcCCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCchh
Confidence            346899999999966 69999999999999997776555443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	264
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		3e-49
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-34
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		2e-31
3tzq_B	271	Crystal Structure Of A Short-Chain Type Dehydrogena		7e-30
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		9e-30
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		1e-29
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		3e-28
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		3e-27
2dtd_A	264	Structure Of Thermoplasma Acidophilum Aldohexose De		4e-26
2zk7_A	257	Structure Of A C-Terminal Deletion Mutant Of Thermo		4e-26
1hxh_A	253	Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID D		9e-26
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		1e-25
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		1e-25
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		1e-25
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		2e-25
2uvd_A	246	The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier		2e-25
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-25
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		3e-25
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		3e-25
4fgs_A	273	Crystal Structure Of A Probable Dehydrogenase Prote		4e-25
3gvc_A	277	Crystal Structure Of Probable Short-Chain Dehydroge		6e-25
4fn4_A	254	Short-chain Nad(h)-dependent Dehydrogenase/reductas		9e-25
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-25
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		1e-24
3vtz_A	269	Structure Of Thermoplasma Volcanium Aldohexose Dehy		2e-24
2pd6_A	264	Structure Of Human Hydroxysteroid Dehydrogenase Typ		3e-24
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		4e-24
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		8e-24
4e6p_A	259	Crystal Structure Of A Probable Sorbitol Dehydrogen		1e-23
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		2e-23
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		2e-23
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		2e-23
2d1y_A	256	Crystal Structure Of Tt0321 From Thermus Thermophil		2e-23
3ak4_A	263	Crystal Structure Of Nadh-Dependent Quinuclidinone		3e-23
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		3e-23
2hq1_A	247	Crystal Structure Of Orf 1438 A Putative GlucoseRIB		4e-23
1xkq_A	280	Crystal Structure Of Short-Chain DehydrogenaseREDUC		5e-23
2a4k_A	263	3-Oxoacyl-[acyl Carrier Protein] Reductase From The		7e-23
3sj7_A	252	Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) F		8e-23
3i3o_A	291	2.06 Angstrom Resolution Crystal Structure Of A Sho		9e-23
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		1e-22
3ijr_A	291	2.05 Angstrom Resolution Crystal Structure Of A Sho		2e-22
3ftp_A	270	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
3tzh_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-22
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-22
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-22
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-22
1geg_A	256	Cryatal Structure Analysis Of Meso-2,3-Butanediol D		8e-22
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		9e-22
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		1e-21
3rsh_A	251	Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reduc		1e-21
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		1e-21
4dml_A	269	3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Syn		1e-21
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		1e-21
4eso_A	255	Crystal Structure Of A Putative Oxidoreductase Prot		3e-21
3vc7_A	254	Crystal Structure Of A Putative Oxidoreductase From		3e-21
2pnf_A	248	Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-		3e-21
3tzc_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		3e-21
3awd_A	260	Crystal Structure Of Gox2181 Length = 260		3e-21
3tzk_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-21
3f9i_A	249	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		4e-21
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		5e-21
2nm0_A	253	Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl		6e-21
3u09_A	251	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		8e-21
3ctm_A	279	Crystal Structure Of A Carbonyl Reductase From Cand		1e-20
2y93_A	281	Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2		2e-20
2ew8_A	249	Crystal Structure Of The (s)-specific 1-phenylethan		3e-20
3pk0_A	262	Crystal Structure Of Short-Chain DehydrogenaseREDUC		3e-20
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		4e-20
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		4e-20
1e3s_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		5e-20
3osu_A	246	Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Pro		8e-20
4b79_A	242	The Aeropath Project And Pseudomonas Aeruginosa Hig		8e-20
1e3w_A	261	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		1e-19
3nug_A	247	Crystal Structure Of Wild Type Tetrameric Pyridoxal		1e-19
1i01_A	244	Crystal Structure Of Beta-Ketoacyl [acyl Carrier Pr		1e-19
2wdz_A	254	Crystal Structure Of The Short Chain Dehydrogenase		1e-19
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		2e-19
1edo_A	244	The X-Ray Structure Of Beta-Keto Acyl Carrier Prote		2e-19
1e6w_A	260	Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Co		2e-19
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		3e-19
1q7c_A	244	The Structure Of Betaketoacyl-[acp] Reductase Y151f		3e-19
3cxr_A	291	Crystal Structure Of Gluconate 5-Dehydrogase From S		4e-19
3is3_A	270	Crystal Structure Of 17beta-Hydroxysteroid Dehydrog		4e-19
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		6e-19
3op4_A	248	Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carr		1e-18
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		1e-18
3itd_A	270	Crystal Structure Of An Inactive 17beta-Hydroxyster		1e-18
3ndr_A	247	Crystal Structure Of Tetrameric Pyridoxal 4-Dehydro		2e-18
1wmb_A	260	Crystal Structure Of Nad Dependent D-3-Hydroxybutyl		2e-18
3gk3_A	269	Crystal Structure Of Acetoacetyl-Coa Reductase From		3e-18
3o38_A	266	Crystal Structure Of A Short Chain Dehydrogenase Fr		4e-18
3gdf_A	267	Crystal Structure Of The Nadp-Dependent Mannitol De		4e-18
3lls_A	475	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		5e-18
2ztm_A	260	T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase L		5e-18
3v1t_C	462	Crystal Structure Of A Putative Ketoacyl Reductase		6e-18
3m1l_A	432	Crystal Strucutre Of A C-Terminal Trunacted Mutant		6e-18
3q6i_A	446	Crystal Structure Of Fabg4 And Coenzyme Binary Comp		6e-18
4fw8_A	454	Crystal Structure Of Fabg4 Complexed With Coenzyme		6e-18
3d3w_B	245	Structure Of L-Xylulose Reductase With Bound Coenzy		7e-18
2ag5_A	246	Crystal Structure Of Human Dhrs6 Length = 246		7e-18
2ztu_A	260	T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase C		9e-18
3s55_A	281	Crystal Structure Of A Putative Short-Chain Dehydro		9e-18
3d3w_A	244	Structure Of L-Xylulose Reductase With Bound Coenzy		9e-18
1u7t_A	261	Crystal Structure Of AbadHSD10 WITH A BOUND INHIBIT		1e-17
4e3z_A	272	Crystal Structure Of A Oxidoreductase From Rhizobiu		1e-17
3u0b_A	454	Crystal Structure Of An Oxidoreductase From Mycobac		1e-17
1pr9_A	244	Human L-Xylulose Reductase Holoenzyme Length = 244		1e-17
3a28_C	258	Crystal Structure Of L-2,3-Butanediol Dehydrogenase		1e-17
3ppi_A	281	Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenas		2e-17
3sx2_A	278	Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Ca		3e-17
1ja9_A	274	Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalen		3e-17
1vl8_A	267	Crystal Structure Of Gluconate 5-dehydrogenase (tm0		3e-17
1so8_A	261	Abeta-bound Human Abad Structure [also Known As 3-h		4e-17
3r3s_A	294	Structure Of The Ygha Oxidoreductase From Salmonell		4e-17
2o23_A	265	The Structure Of Wild-Type Human Hadh2 (17beta-Hydr		4e-17
2q2q_A	255	Structure Of D-3-Hydroxybutyrate Dehydrogenase From		5e-17
4egf_A	266	Crystal Structure Of A L-Xylulose Reductase From My		6e-17
4iqg_C	271	Crystal Structure Of Bpro0239 Oxidoreductase From P		6e-17
1bdb_A	277	Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From		7e-17
1doh_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		7e-17
1ybv_A	283	Structure Of Trihydroxynaphthalene Reductase In Com		8e-17
3rih_A	293	Crystal Structure Of A Putative Short Chain Dehydro		1e-16
3tjr_A	301	Crystal Structure Of A Rv0851c Ortholog Short Chain		2e-16
4iin_A	271	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		2e-16
1cyd_A	244	Carbonyl Reductase Complexed With Nadph And 2-Propa		2e-16
2yz7_A	260	X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase F		3e-16
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		4e-16
3qlj_A	322	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-16
1xq1_A	266	X-Ray Structure Of Putative Tropinone Reducatse Fro		5e-16
2c07_A	285	Oxoacyl-Acp Reductase Of Plasmodium Falciparum Leng		7e-16
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		1e-15
3svt_A	281	Structure Of A Short-Chain Type DehydrogenaseREDUCT		2e-15
2rhr_B	277	P94l Actinorhodin Ketordeuctase Mutant, With Nadph		2e-15
3csd_B	281	Actinorhodin Polyketide Ketoreductase Mutant P94l B		2e-15
2cf2_E	226	Architecture Of Mammalian Fatty Acid Synthase Lengt		2e-15
4dc0_A	281	Crystal Structure Of F189w Actinorhodin Polyketide		4e-15
3ai1_A	263	The Crystal Structure Of L-Sorbose Reductase From G		4e-15
3enn_A	249	2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-15
3emk_A	246	2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGEN		4e-15
3grp_A	266	2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-		5e-15
4afn_A	269	Crystal Structure Of 3-ketoacyl-(acyl-carrier-prote		5e-15
3u5t_A	267	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		5e-15
3v2g_A	271	Crystal Structure Of A DehydrogenaseREDUCTASE FROM		6e-15
4dc1_A	281	Crystal Structure Of Y202f Actinorhodin Polyketide		6e-15
2z1n_A	260	Crystal Structure Of Ape0912 From Aeropyrum Pernix		7e-15
1x7g_A	261	Actinorhodin Polyketide Ketoreductase, Act Kr, With		7e-15
1w4z_A	281	Structure Of Actinorhodin Polyketide (Actiii) Reduc		7e-15
4dbz_A	281	Crystal Structure Of V151l Actinorhodin Polyketide		8e-15
2rh4_A	277	Actinorhodin Ketoreductase, Actkr, With Nadph And I		8e-15
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		8e-15
3ai3_A	263	The Crystal Structure Of L-Sorbose Reductase From G		1e-14
3tpc_A	257	Crystal Structure Of A Hypothtical Protein Sma1452		1e-14
4hp8_A	247	Crystal Structure Of A Putative 2-Deoxy-D-Gluconate		1e-14
3oic_A	258	Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl		1e-14
1uzl_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-14
1mxh_A	276	Crystal Structure Of Substrate Complex Of Putative		2e-14
3v8b_A	283	Crystal Structure Of A 3-Ketoacyl-Acp Reductase Fro		2e-14
4dyv_A	272	Crystal Structure Of A Short-Chain DehydrogenaseRED		2e-14
3v2h_A	281	The Crystal Structure Of D-Beta-Hydroxybutyrate Deh		2e-14
1ae1_A	273	Tropinone Reductase-I Complex With Nadp Length = 27		2e-14
2ph3_A	245	Crystal Structure Of 3-oxoacyl-[acyl Carrier Protei		2e-14
2b4q_A	276	Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex		4e-14
1yxm_A	303	Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa		6e-14
4gkb_A	258	Crystal Structure Of A Short Chain Dehydrogenase Ho		1e-13
1ipe_A	259	Tropinone Reductase-Ii Complexed With Nadph Length		2e-13
2ae2_A	260	Tropinone Reductase-Ii Complexed With Nadp+ And Pse		2e-13
4ibo_A	271	Crystal Structure Of A Putative Gluconate Dehydroge		2e-13
2gdz_A	267	Crystal Structure Of 15-Hydroxyprostaglandin Dehydr		3e-13
3rkr_A	262	Crystal Structure Of A Metagenomic Short-Chain Oxid		3e-13
2ntn_A	267	Crystal Structure Of Maba-c60v/g139a/s144l Length =		3e-13
3rku_A	287	Substrate Fingerprint And The Structure Of Nadp+ De		4e-13
3lyl_A	247	Structure Of 3-Oxoacyl-Acylcarrier Protein Reductas		4e-13
1mxf_A	276	Crystal Structure Of Inhibitor Complex Of Putative		5e-13
3uf0_A	273	Crystal Structure Of A Putative Nad(P) Dependent Gl		7e-13
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		8e-13
3tl3_A	257	Structure Of A Short-Chain Type DehydrogenaseREDUCT		9e-13
1x1e_A	239	Crystal Structure Of Tt0495 Protein From Thermus Th		1e-12
1uzm_A	247	Maba From Mycobacterium Tuberculosis Length = 247		1e-12
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		2e-12
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		2e-12
2jap_A	247	Clavulanic Acid Dehydrogenase: Structural And Bioch		2e-12
4g81_D	255	Crystal Structure Of A Hexonate Dehydrogenase Ortho		2e-12
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-12
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		3e-12
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		5e-12
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		6e-12
3sju_A	279	Hedamycin Polyketide Ketoreductase Bound To Nadph L		6e-12
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		9e-12
3g1t_A	258	Crystal Structure Of Short Chain Dehydrogenase From		1e-11
2jah_A	247	Biochemical And Structural Analysis Of The Clavulan		1e-11
1o5i_A	249	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-11
2fwm_X	250	Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodih		2e-11
3pxx_A	287	Crystal Structure Of Carveol Dehydrogenase From Myc		3e-11
1h5q_A	265	Mannitol Dehydrogenase From Agaricus Bisporus Lengt		3e-11
3ksu_A	262	Crystal Structure Of Short-Chain Dehydrogenase From		4e-11
3f5s_A	255	Crystal Structure Of Putatitve Short Chain Dehydrog		4e-11
3f5q_A	262	Crystal Structure Of Putative Short Chain Dehydroge		4e-11
3oml_A	613	Structure Of Full-Length Peroxisomal Multifunctiona		5e-11
3icc_A	255	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Car		6e-11
2qq5_A	260	Crystal Structure Of Human Sdr Family Member 1 Leng		8e-11
1zbq_A	327	Crystal Structure Of Human 17-beta-hydroxysteroid D		1e-10
3p19_A	266	Improved Nadph-Dependent Blue Fluorescent Protein L		1e-10
3f1l_A	252	The 0.95 A Structure Of An Oxidoreductase, Ycik Fro		2e-10
3un1_A	260	Crystal Structure Of An Oxidoreductase From Sinorhi		3e-10
3imf_A	257	1.99 Angstrom Resolution Crystal Structure Of A Sho		3e-10
2ehd_A	234	Crystal Structure Analysis Of Oxidoreductase Length		3e-10
4iiu_A	267	Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Car		3e-10
3iah_A	256	Crystal Structure Of Short Chain Dehydrogenase (yci		4e-10
3ezl_A	256	Crystal Structure Of Acetyacetyl-Coa Reductase From		5e-10
3edm_A	259	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-10
4dry_A	281	The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Pr		9e-10
3afm_A	258	Crystal Structure Of Aldose Reductase A1-R Responsi		1e-09
3ged_A	247	Fingerprint And Structural Analysis Of A Apo Scor E		1e-09
3e9q_A	273	Crystal Structure Of The Short Chain Dehydrogenase		2e-09
3tfo_A	264	Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Car		2e-09
1xg5_A	279	Structure Of Human Putative Dehydrogenase Mgc4172 I		2e-09
1yb1_A	272	Crystal Structure Of Human 17-Beta-Hydroxysteroid D		3e-09
1gz6_A	319	(3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat		3e-09
3f1k_A	252	Crystal Structure Of Ycik From E. Coli, An Oxidored		3e-09
2qio_A	256	X-Ray Structure Of Enoyl-Acyl Carrier Protein Reduc		3e-09
3ojf_A	257	Crystal Structure Of The Bacillus Cereus Enoyl-Acyl		4e-09
3ioy_A	319	Structure Of Putative Short-Chain Dehydrogenase (Sa		4e-09
1p33_A	289	Pteridine Reductase From Leishmania Tarentolae Comp		8e-09
4da9_A	280	Crystal Structure Of Putative Short-Chain Dehydroge		1e-08
3t4x_A	267	Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDU		2e-08
1uay_A	242	Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehy		2e-08
4eit_A	276	Crystal Structure Of An Enoyl-(Acyl Carrier Protein		2e-07
2xox_A	288	Crystal Structure Of Pteridine Reductase (Ptr1) Fro		2e-07
3kvo_A	346	Crystal Structure Of The Catalytic Domain Of Human		2e-07
3oif_A	266	Crystal Structure Of Enoyl-Acp Reductases I (Fabi)		3e-07
3kzv_A	254	The Crystal Structure Of A Cytoplasmic Protein With		5e-07
2p91_A	285	Crystal Structure Of Enoyl-[acyl-Carrier-Protein] R		7e-07
3nyw_A	250	Crystal Structure Of A Betaketoacyl-[acp] Reductase		7e-07
3lf1_A	265	Apo Structure Of The Short Chain Oxidoreductase Q9h		1e-06
3grk_A	293	Crystal Structure Of Short Chain Dehydrogenase Redu		1e-06
2nwq_A	272	Short Chain Dehydrogenase From Pseudomonas Aerugino		1e-06
3tn7_A	257	Crystal Structure Of Short-Chain Alcohol Dehydrogen		1e-06
2dkn_A	255	Crystal Structure Of The 3-alpha-hydroxysteroid Deh		2e-06
3e03_A	274	Crystal Structure Of A Putative Dehydrogenase From		2e-06
1fjh_A	257	The Crystal Structure Of 3-Alpha-Hydroxysteroid Deh		2e-06
2bd0_A	244	Chlorobium Tepidum Sepiapterin Reductase Complexed		2e-06
3i4f_A	264	Structure Of Putative 3-oxoacyl-reductase From Baci		2e-06
3l77_A	235	X-Ray Structure Alcohol Dehydrogenase From Archaeon		4e-06
1w6u_A	302	Structure Of Human Decr Ternary Complex Length = 30		5e-06
3gmd_A	264	Structure-Based Design Of 7-Azaindole-Pyrrolidines		6e-06
1y5m_A	276	The Crystal Structure Of Murine 11b-Hydroxysteroid		6e-06
1w0c_A	307	Inhibition Of Leishmania Major Pteridine Reductase		7e-06
1e92_A	288	Pteridine Reductase 1 From Leishmania Major Complex		8e-06
1e7w_A	291	One Active Site, Two Modes Of Reduction Correlate T		9e-06
2qhx_A	328	Structure Of Pteridine Reductase From Leishmania Ma		9e-06
2ilt_A	275	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-05
1xu7_A	286	Crystal Structure Of The Interface Open Conformatio		2e-05
3pdj_A	273	Crystal Structure Of Human 11-Beta-Hydroxysteroid D		2e-05
2bel_A	283	Structure Of Human 11-Beta-Hydroxysteroid Dehydroge		2e-05
3d5q_A	272	Crystal Structure Of 11b-Hsd1 In Complex With Triaz		2e-05
2irw_A	264	Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) W		2e-05
4bb6_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-05
4bb5_A	292	Free-Wilson And Structural Approaches To Co-Optimis		2e-05
2rbe_A	275	The Discovery Of 2-Anilinothiazolones As 11beta-Hsd		2e-05
3ch6_A	286	Crystal Structure Of 11beta-Hsd1 Double Mutant (L26		3e-05
4hfr_A	272	Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In		3e-05
3asu_A	248	Crystal Structure Of Serine Dehydrogenase From Esch		3e-05
1xse_A	295	Crystal Structure Of Guinea Pig 11beta-Hydroxystero		4e-05
3lz6_A	263	Guinea Pig 11beta Hydroxysteroid Dehydrogenase With		4e-05
3uxy_A	266	The Crystal Structure Of Short Chain Dehydrogenase		4e-05
3g49_A	277	N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-		5e-05
3dwf_A	276	Crystal Structure Of The Guinea Pig 11beta-Hydroxys		5e-05
2pd3_A	275	Crystal Structure Of The Helicobacter Pylori Enoyl-		1e-04
3m1a_A	281	The Crystal Structure Of A Short-Chain Dehydrogenas		2e-04
3uce_A	223	Crystal Structure Of A Small-Chain Dehydrogenase In		3e-04
1w73_A	302	Binary Structure Of Human Decr Solved By Semet Sad.		3e-04
2yw9_A	261	Crystal Structure Of Tt0143 From Thermus Thermophil		7e-04
3e9n_A	245	Crystal Structure Of A Putative Short-Chain Dehydro		8e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  191 bits (486), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 122/260 (46%), Positives = 176/260 (67%), Gaps = 4/260 (1%)
Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG 63
           S+  ++ N+L+ KVAIITGGA GIGETTA+LF  +GA+ +VIADI D+ G++V  +IG  
Sbjct: 5   STPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADDHGQKVCNNIGSP 63
Query: 64  KC-HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
               +VHCDVT +  V+ LVD+T+  +G+LDIMF N G+LS++  ++L+     F R+  
Sbjct: 64  DVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMD 123
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD-YHMSKHAVIGLVRSAS 181
           INV G     KHAARVM+    +GSIV TAS++    G+  +  Y  +KHAV+GL  S  
Sbjct: 124 INVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLC 182
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
            +LG +GIRVNCVSP+ +A+PL    +G+ +  VE+L      L+G +LRA  VADAV +
Sbjct: 183 TELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAY 242
Query: 242 LACRDSEFVTGHDLVVDGGF 261
           LA  +S++V+G +LV+DGG+
Sbjct: 243 LAGDESKYVSGLNLVIDGGY 262

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score =  140 bits (353), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/253 (38%), Positives = 143/253 (56%), Gaps = 13/253 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVG-KCHYVHC 70
           L GK A+ITG ++GIG+  A  +A+ GA++ V A   D L + VA  I GVG K   + C
Sbjct: 30  LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDAL-QVVADEIAGVGGKALPIRC 88
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT   QV+ ++D      G +DI   NAGI+S   Q +LD+    F R+   NV G+  
Sbjct: 89  DVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVFL 146
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             + AAR MV+ G+ G+I+ TAS++G      ++ + Y  SK AV+ L ++ +V+L  H 
Sbjct: 147 TAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQ 206
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN VSP  + T L       P  +   L+EP+ PL G + R   +    L+LA   S 
Sbjct: 207 IRVNSVSPGYIRTELV-----EPLADYHALWEPKIPL-GRMGRPEELTGLYLYLASAASS 260
Query: 249 FVTGHDLVVDGGF 261
           ++TG D+V+DGG+
Sbjct: 261 YMTGSDIVIDGGY 273

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  132 bits (331), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 138/249 (55%), Gaps = 15/249 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GKVA+++GGA G+G +  R     GA+ +V  DI DE G+ +A  +      YVH D
Sbjct: 4   RLTGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDEEGKAMAAELAD-AARYVHLD 61
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT   Q KA VD+ V  +G L ++ +NAGIL+    T+ D   + + R+  +N+ G+   
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFLG 119
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++   + M E G RGSI+  +S+ G  G      Y  +K AV GL +S +++LG  GIRV
Sbjct: 120 IRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N + P  + TP+T     +P D    +F  QT L G       V++ V++LA  +S + T
Sbjct: 179 NSIHPGLVKTPMTDW---VPED----IF--QTAL-GRAAEPVEVSNLVVYLASDESSYST 228
Query: 252 GHDLVVDGG 260
           G + VVDGG
Sbjct: 229 GAEFVVDGG 237

>pdb|3TZQ|B Chain B, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 271

Iteration: 1
 Score =  127 bits (319), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 132/252 (52%), Gaps = 9/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +LE KVAIITG   GIG  T+R+ A  GAR +V+AD+ +      A S+G G  H+V  D
Sbjct: 8   ELENKVAIITGACGGIGLETSRVLARAGAR-VVLADLPETDLAGAAASVGRGAVHHV-VD 65
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +TNE  V+AL+D T+  +G+LDI+ +NA     +D  V  +    +D  F +N RG    
Sbjct: 66  LTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLM 125
Query: 132 VKHA-ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            K+A  R++  GG  G+IV  +S          T Y  +K A+  L R  + Q G HG+R
Sbjct: 126 CKYAIPRLISAGG--GAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVR 183
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
            N ++P  + TP      G+P   V+ +F     L G +     +A+ V FLA   + F+
Sbjct: 184 CNAIAPGLVRTPRL--EVGLPQPIVD-IFATHH-LAGRIGEPHEIAELVCFLASDRAAFI 239
Query: 251 TGHDLVVDGGFL 262
           TG  +  D G L
Sbjct: 240 TGQVIAADSGLL 251

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score =  126 bits (317), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 10/254 (3%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L  +V I+TGG SGIG  TA LFA +GA  +V+AD+ ++   +VA  IG  K   V  DV
Sbjct: 25  LNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEIG-SKAFGVRVDV 82
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++    ++ V+ T   +G++D++ +NAG  ++ +  V+ +    +DR+ ++NV+G+  C 
Sbjct: 83  SSAKDAESXVEKTTAKWGRVDVLVNNAGFGTTGN--VVTIPEETWDRIXSVNVKGIFLCS 140
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K+   V    G  GSI+ T S   +     RT Y  SK A+  L R+ +      GIRVN
Sbjct: 141 KYVIPVXRRNG-GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAXAXDHAKEGIRVN 199
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLACRDSEF 249
            V+P  + +P     +    D  +           V  R G    +A+A LFLA   S F
Sbjct: 200 AVAPGTIDSPYFTKIFAEAKDPAK--LRSDFNARAVXDRXGTAEEIAEAXLFLASDRSRF 257
Query: 250 VTGHDLVVDGGFLI 263
            TG  L VDGG  I
Sbjct: 258 ATGSILTVDGGSSI 271

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score =  126 bits (316), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 134/249 (53%), Gaps = 15/249 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GKVA+++GGA G G +  R     GA+ +V  DI DE G+  A  +      YVH D
Sbjct: 4   RLTGKVALVSGGARGXGASHVRAXVAEGAK-VVFGDILDEEGKAXAAELAD-AARYVHLD 61
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT   Q KA VD+ V  +G L ++ +NAGIL+    T+ D   + + R+  +N+ G+   
Sbjct: 62  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFLG 119
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++   +   E G RGSI+  +S+ G  G      Y  +K AV GL +S +++LG  GIRV
Sbjct: 120 IRAVVKPXKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 178
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N + P  + TP T     +P D    +F  QT L G       V++ V++LA  +S + T
Sbjct: 179 NSIHPGLVKTPXTDW---VPED----IF--QTAL-GRAAEPVEVSNLVVYLASDESSYST 228
Query: 252 GHDLVVDGG 260
           G + VVDGG
Sbjct: 229 GAEFVVDGG 237

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score =  121 bits (304), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 127/256 (49%), Gaps = 12/256 (4%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GK A+ITG A GIG   A  +   GAR + IADI  E  R  A  IG   C  +  D
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGAR-VAIADINLEAARATAAEIGPAACA-IALD 59
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT++  +   V   +  +G +DI+ +NA +   +   ++++   ++DRLFAINV G    
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLA--PIVEITRESYDRLFAINVSGTLFM 117
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++  AR M+ GG  G I+  AS AG  G      Y  +K AVI L +SA + L  HGI V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177
Query: 192 NCVSP------HGLATPLTCHAY-GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           N ++P      H          Y  +P  E ++      P  G + RA  +    +FLA 
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGMAIFLAT 236
Query: 245 RDSEFVTGHDLVVDGG 260
            +++++      VDGG
Sbjct: 237 PEADYIVAQTYNVDGG 252

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score =  118 bits (296), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 30/274 (10%)
Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGV 62
           ++  +   +   +V +ITGG SG+G  TA   A  GA++ ++ D+  E L    A  +  
Sbjct: 2   TATSSPTTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLV-DVSSEGLEASKAAVLET 60
Query: 63  GKCHYVH---CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--F 117
                V     DV++E QV+A V +T + +G++D  F+NAGI    + T     F+A  F
Sbjct: 61  APDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQNPT---ESFTAAEF 117
Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
           D++ +IN+RG+   ++   ++M E G  G +V TASV G  G   ++ Y  +KH V+GL 
Sbjct: 118 DKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLT 176
Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL------- 230
           R+++V+ G +GIR+N ++P  + TP+  ++         K  +P+ P +           
Sbjct: 177 RNSAVEYGRYGIRINAIAPGAIWTPMVENSM--------KQLDPENPRKAAEEFIQVNPS 228
Query: 231 ----RAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
                A  +A  V FL   D+ +V    + +DGG
Sbjct: 229 KRYGEAPEIAAVVAFLLSDDASYVNATVVPIDGG 262

>pdb|2DTD|A Chain A, Structure Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (aldt) In Ligand-free Form Length = 264

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 128/259 (49%), Gaps = 22/259 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L  KV I+TG + GIG   A  F D G+++I ++ I D          G  K  ++ CDV
Sbjct: 6   LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS-IHDP---------GEAKYDHIECDV 55
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           TN  QVKA +D   + YG + ++ +NAGI S     +  +    + R+  +N+ G     
Sbjct: 56  TNPDQVKASIDHIFKEYGSISVLVNNAGIESYG--KIESMSMGEWRRIIDVNLFGYYYAS 113
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K A   M+      SIV  +SV  S   K  + Y  SKHAVIGL +S ++      +R N
Sbjct: 114 KFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 171
Query: 193 CVSPHGLATPLTCHAYGM-----PADEVEKLFEP--QTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TPL   A  +     P    +K+ E   + P++ +  +   VA AV FLA R
Sbjct: 172 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG-KPQEVASAVAFLASR 230
Query: 246 DSEFVTGHDLVVDGGFLIR 264
           ++ F+TG  L VDGG  IR
Sbjct: 231 EASFITGTCLYVDGGLSIR 249

>pdb|2ZK7|A Chain A, Structure Of A C-Terminal Deletion Mutant Of Thermoplasma Acidophilum Aldohexose Dehydrogenase (Aldt) Length = 257

Iteration: 1
 Score =  114 bits (286), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 128/259 (49%), Gaps = 22/259 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L  KV I+TG + GIG   A  F D G+++I ++ I D          G  K  ++ CDV
Sbjct: 13  LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLS-IHDP---------GEAKYDHIECDV 62
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           TN  QVKA +D   + YG + ++ +NAGI S     +  +    + R+  +N+ G     
Sbjct: 63  TNPDQVKASIDHIFKEYGSISVLVNNAGIESYG--KIESMSMGEWRRIIDVNLFGYYYAS 120
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K A   M+      SIV  +SV  S   K  + Y  SKHAVIGL +S ++      +R N
Sbjct: 121 KFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCN 178
Query: 193 CVSPHGLATPLTCHAYGM-----PADEVEKLFEP--QTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TPL   A  +     P    +K+ E   + P++ +  +   VA AV FLA R
Sbjct: 179 AVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG-KPQEVASAVAFLASR 237
Query: 246 DSEFVTGHDLVVDGGFLIR 264
           ++ F+TG  L VDGG  IR
Sbjct: 238 EASFITGTCLYVDGGLSIR 256

>pdb|1HXH|A Chain A, Comamonas Testosteroni 3beta17BETA HYDROXYSTEROID Dehydrogenase Length = 253

Iteration: 1
 Score =  113 bits (283), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 8/254 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N+L+GKVA++TGGASG+G    +L    GA+ +  +DI +  G+Q+A  +G  +  +V  
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAAELG-ERSMFVRH 59
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++E     ++ +  +  G L+++ +NAGIL   D     L+   F RL  IN   +  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLE--DFSRLLKINTESVFI 117
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG-- 188
             +     M E G  GSI+  ASV+     ++   Y  SK AV  L R+A++     G  
Sbjct: 118 GCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYA 175
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN + P G+ TP+   +      +   L +P+    G       +A  VLFLA  +S 
Sbjct: 176 IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESS 235
Query: 249 FVTGHDLVVDGGFL 262
            ++G +L  D   L
Sbjct: 236 VMSGSELHADNSIL 249

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 126/251 (50%), Gaps = 9/251 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N L GK  IITGGA G+G   AR     GAR +V+AD+ DE G   A  +G     Y H 
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATARELG-DAARYQHL 58
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E   + +V    + +G +D + +NAGI  S+   +       F ++  IN+ G+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLETESVERFRKVVEINLTGVFI 116
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +K     M + G  GSIV  +S AG  G    + Y  SK  V GL + A+V+LG   IR
Sbjct: 117 GMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V P    TP+T    G+   E      P TP+  V    G +A AV+ L    S +V
Sbjct: 176 VNSVHPGMTYTPMTAET-GIRQGEGNY---PNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231
Query: 251 TGHDLVVDGGF 261
           TG +L VDGG+
Sbjct: 232 TGAELAVDGGW 242

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 135/254 (53%), Gaps = 10/254 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVH 69
           N+L+GKVAIITGG  GIG   A  F + GA+ ++I D   ++G + A S+G   +  +  
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAK-VMITDRHSDVGEKAAKSVGTPDQIQFFQ 60
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D ++E     L D+T + +G +  + +NAGI  + +++V +   + + +L A+N+ G+ 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ--LGVH 187
              +   + M   G+  SI+  +S+ G  G      Y+ SK AV  + +SA++   L  +
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            +RVN V P  + TPL      +P  E       +TP+ G +     +A   ++LA  +S
Sbjct: 179 DVRVNTVHPGYIKTPLVDD---LPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNES 234
Query: 248 EFVTGHDLVVDGGF 261
           +F TG + VVDGG+
Sbjct: 235 KFATGSEFVVDGGY 248

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score =  113 bits (282), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 127/251 (50%), Gaps = 10/251 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N L GK  IITGGA G+G   AR     GAR +V+AD+ DE G   A  +G     Y H 
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATARELG-DAARYQHL 58
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E   + +V    + +G +D + +NAGI  S+   +       F ++  IN+ G+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLETESVERFRKVVEINLTGVFI 116
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +K     M + G  GSIV  +S AG  G    + Y  SK  V GL + A+V+LG   IR
Sbjct: 117 GMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V P    TP+T    G+   E      P TP+ G V   G +A AV+ L    S +V
Sbjct: 176 VNSVHPGMTYTPMTAET-GIRQGEGNY---PNTPM-GRVGEPGEIAGAVVKLLSDTSSYV 230
Query: 251 TGHDLVVDGGF 261
           TG +L VDGG+
Sbjct: 231 TGAELAVDGGW 241

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 16/258 (6%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVI---ADIQDELGRQV-ATSIGVGKCHYVHCD 71
           KVAIITG ++GIG  TA LFA  GA++ +    A+  +E  +Q+ A  +     + V  D
Sbjct: 7   KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVAD 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           VT +     ++ +T+  +G+LDI+ +NAG  I  S  +T       ++D    +N+R + 
Sbjct: 67  VTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVI 126
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH-MSKHAVIGLVRSASVQLGVHG 188
           A  K A   +     +G IV  +S+A          Y+ ++K A+    R+ ++ L  HG
Sbjct: 127 ALTKKAVPHL--SSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHG 184
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE-----GVVLRAGHVADAVLFLA 243
           IRVN +SP  +AT     A GMP +  +K +     ++     GV+ +   +A+ + FLA
Sbjct: 185 IRVNSISPGLVATGFGS-AMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAEVIAFLA 243
Query: 244 CRD-SEFVTGHDLVVDGG 260
            R  S ++ GH LVVDGG
Sbjct: 244 DRKTSSYIIGHQLVVDGG 261

>pdb|2UVD|A Chain A, The Crystal Structure Of A 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis (Ba3989) Length = 246

Iteration: 1
 Score =  112 bits (280), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 126/253 (49%), Gaps = 10/253 (3%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+GKVA++TG + GIG   A   A  GA ++V     ++   +V   I         V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV N   V  +V  TV  +GQ+DI+ +NAG+  + D  ++ +    +D +   N++G+  
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGV--TKDNLLMRMKEEEWDTVINTNLKGVFL 119
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C K  +R M+     G IV  ASV G  G   + +Y  +K  VIGL ++++ +L    I 
Sbjct: 120 CTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNIT 178
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN ++P  +AT +T         E+ KL       E     A  +A+AV F A   S+++
Sbjct: 179 VNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGE-----AQDIANAVTFFASDQSKYI 233
Query: 251 TGHDLVVDGGFLI 263
           TG  L VDGG ++
Sbjct: 234 TGQTLNVDGGMVM 246

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 140/291 (48%), Gaps = 54/291 (18%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVI----------------------ADIQ 49
           ++ GKVA I+G A G G + A   A  GA +I I                      AD+ 
Sbjct: 12  RVAGKVAFISGAARGQGRSHAVRLAQEGADIIAIDICGPIENLAYPHSTPEDLAETADLV 71
Query: 50  DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTV 109
            +L R++ T+           DV +   +K+ VDS V+  G+LDI+ +NAG+  +  + +
Sbjct: 72  KDLDRRIVTA---------QVDVRDFEALKSAVDSGVEQLGRLDIIVANAGV-GTDGRKL 121
Query: 110 LDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS 169
             +  + +  +  IN+ G+   VK     ++ GG  GSIV T+SV G         Y  +
Sbjct: 122 HKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGGSIVLTSSVGGRKAYPNTGHYIAA 181
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP--QTP--- 224
           KH VIGL+R+ +V+LG H IRVN V P  ++T +  +      D+  +LF P  + P   
Sbjct: 182 KHGVIGLMRAFAVELGPHMIRVNAVLPTQVSTTMVMN------DQTFRLFRPDLENPGPD 235
Query: 225 -----------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
                      L    + A  +++AVLFLA  +S +VTG  L VD G L++
Sbjct: 236 DFAPISQMMHTLPVPWVDASDISNAVLFLASDESRYVTGVSLPVDAGSLLK 286

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score =  112 bits (279), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 128/251 (50%), Gaps = 11/251 (4%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS---IGVGKCHYVHCDV 72
           +VAI+TG +SG G   A  F   G R+  + D+  E   + A +       K   V  DV
Sbjct: 3   RVAIVTGASSGNGLAIATRFLARGDRVAAL-DLSAETLEETARTHWHAYADKVLRVRADV 61
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAINVRGM-AA 130
            +E  V A + +T++ +G +D++ +NAGI  +S+  VL       FD++ A+NVRG+   
Sbjct: 62  ADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLG 121
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C      ++++G   G IV  ASVA       R+ Y  SK AV+ L +S +V     GIR
Sbjct: 122 CRAVLPHMLLQGA--GVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
            N V P  + TP+T      P  E+      + P +  +  A  VADAV+FLA  D+ +V
Sbjct: 180 CNAVCPGMIETPMTQWRLDQP--ELRDQVLARIP-QKEIGTAAQVADAVMFLAGEDATYV 236
Query: 251 TGHDLVVDGGF 261
            G  LV+DG +
Sbjct: 237 NGAALVMDGAY 247

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score =  111 bits (278), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 126/258 (48%), Gaps = 17/258 (6%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVG 63
           ++LEGK+AI+TG +SGIG   A LFA  GA+++V       +A++ DE+           
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGE----- 58
Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
               +  DV +E   +ALV+  V+ +G LD  F+NAG L +  + +  L    +      
Sbjct: 59  -AAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAMGE-ISSLSVEGWRETLDT 116
Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAG-SCGGKRRTDYHMSKHAVIGLVRSASV 182
           N+       K+    +   G  GS+  T+S  G + G      Y  SK  +IGLV++ +V
Sbjct: 117 NLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAV 175
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           +LG  GIRVN + P G  TP         A E     E    L+ +  R   +A+A L+L
Sbjct: 176 ELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIA-RPEEIAEAALYL 234
Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   + FVTG  L+ DGG
Sbjct: 235 ASDGASFVTGAALLADGG 252

>pdb|4FGS|A Chain A, Crystal Structure Of A Probable Dehydrogenase Protein Length = 273

Iteration: 1
 Score =  111 bits (277), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 121/253 (47%), Gaps = 11/253 (4%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L  K+A+ITG  SGIG   A+ F   GAR+ +    +D L   +A  IG G    +  
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIA-EIGGGAVG-IQA 82
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D  N  ++  L +      G++D++F NAG    S   + ++    +D  F  NV+G+  
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAG--GGSXLPLGEVTEEQYDDTFDRNVKGVLF 140
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            V+ A  ++  G    S+V T S AGS G    + Y  SK A+    R+  + L   GIR
Sbjct: 141 TVQKALPLLARGS---SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIR 197
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEP---QTPLEGVVLRAGHVADAVLFLACRDS 247
           +N +SP    T       G    + + L      Q P  G V RA  VA A LFLA  DS
Sbjct: 198 INTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVP-XGRVGRAEEVAAAALFLASDDS 256
Query: 248 EFVTGHDLVVDGG 260
            FVTG +L VDGG
Sbjct: 257 SFVTGAELFVDGG 269

>pdb|3GVC|A Chain A, Crystal Structure Of Probable Short-Chain Dehydrogenase- Reductase From Mycobacterium Tuberculosis Length = 277

Iteration: 1
 Score =  110 bits (276), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 131/255 (51%), Gaps = 13/255 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L GKVAI+TG  +GIG   AR  AD G   ++ ADI  +     AT IG G       DV
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCH-VLCADIDGDAADAAATKIGCGAA-ACRVDV 84
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++E Q+ A+VD+ V  +G +D + +NAG++  +  +++D     FDR+ AIN+RG   C 
Sbjct: 85  SDEQQIIAMVDACVAAFGGVDKLVANAGVVHLA--SLIDTTVEDFDRVIAINLRGAWLCT 142
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           KHAA  M+E G  G+IV  +S+AG         Y MSK  +I L R  + +L   GIR N
Sbjct: 143 KHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN 201
Query: 193 CVSPHGLATPLTCHAYGM-----PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            + P  + TP+   A  M      A     +      L+G +     +A  V+FL   D+
Sbjct: 202 TLLPAFVDTPMQQTAMAMFDGALGAGGARSMI---ARLQGRMAAPEEMAGIVVFLLSDDA 258
Query: 248 EFVTGHDLVVDGGFL 262
             +TG   + DGG +
Sbjct: 259 SMITGTTQIADGGTI 273

>pdb|4FN4|A Chain A, Short-chain Nad(h)-dependent Dehydrogenase/reductase From Sulfolobus Acidocaldarius Length = 254

Iteration: 1
 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 4/252 (1%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGK-CHYVHCD 71
           L+ KV I+TG  SGIG   A+ FA + + ++ +  ++D L + V    G+GK    V  D
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD 64
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V+ +  V+  V  T + Y ++D++ +NAGI+      V ++    ++R+ A+N+      
Sbjct: 65  VSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV-TPVAEVSDELWERVLAVNLYSAFYS 123
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +    +M++ G +G IV TAS+AG  GG     Y ++KH +IGL RS +   G  GIR 
Sbjct: 124 SRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRA 182
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
             V P  + T +   +   P++   +       L   +     +A+ ++FLA  ++ FV 
Sbjct: 183 VAVLPGTVKTNIGLGS-SKPSELGMRTLTKLMSLSSRLAEPEDIANVIVFLASDEASFVN 241
Query: 252 GHDLVVDGGFLI 263
           G  +VVDGG  +
Sbjct: 242 GDAVVVDGGLTV 253

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score =  110 bits (274), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 128/251 (50%), Gaps = 7/251 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           LEGKVA+ITG  SG GE  A+ FA  GA+ +VI D       +VA  IG      V  D+
Sbjct: 7   LEGKVALITGAGSGFGEGMAKRFAKGGAK-VVIVDRDKAGAERVAGEIG-DAALAVAADI 64
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           + E  V A V++ +  +G++DI+ +NAGI     Q    ++   FDR+  +NVRG+    
Sbjct: 65  SKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELVEPEEFDRIVGVNVRGVYLMT 123
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD---YHMSKHAVIGLVRSASVQLGVHGI 189
                   E G +G      +VA +  G+ R +   Y+ +K  V+ + ++ +++L    I
Sbjct: 124 SKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKI 183
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RV  ++P    TPL     G  ++E+ K F    P+ G +L+   +A+A  FL    +  
Sbjct: 184 RVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLCSPQASM 242
Query: 250 VTGHDLVVDGG 260
           +TG  L VDGG
Sbjct: 243 ITGVALDVDGG 253

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score =  110 bits (274), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/254 (30%), Positives = 134/254 (52%), Gaps = 10/254 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVH 69
           N+L+GKVAIITGG  GIG   A  F + GA++++     D +G + A S+G   +  +  
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSD-VGEKAAKSVGTPDQIQFFQ 60
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D ++E     L D+T + +G +  + +NAGI  + +++V +   + + +L A+N+ G+ 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ--LGVH 187
              +   + M   G+  SI+  +S+ G  G      Y+ SK AV  + +SA++   L  +
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178
Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            +RVN V P  + TPL      +P  E       +TP+ G +     +A   ++LA  +S
Sbjct: 179 DVRVNTVHPGYIKTPLVDD---LPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNES 234
Query: 248 EFVTGHDLVVDGGF 261
           +F TG + VVDGG+
Sbjct: 235 KFATGSEFVVDGGY 248

>pdb|3VTZ|A Chain A, Structure Of Thermoplasma Volcanium Aldohexose Dehydrogenase Length = 269

Iteration: 1
 Score =  109 bits (272), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 126/254 (49%), Gaps = 21/254 (8%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           KVAI+TGG+SGIG         +GA+++ ++   DE          V    +   DVTNE
Sbjct: 15  KVAIVTGGSSGIGLAVVDALVRYGAKVVSVS--LDEKS-------DVNVSDHFKIDVTNE 65
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
            +VK  V+ T + YG++DI+ +NAGI   S   +   +   + R+  +NV G     K+ 
Sbjct: 66  EEVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEI--WRRIIDVNVNGSYLMAKYT 123
Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
             VM+  G  GSI+  ASV      K    Y  SKHA++GL RS ++      IR N V 
Sbjct: 124 IPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAPK-IRCNAVC 181
Query: 196 PHGLATPLTCHAYGMPADE----VEKLFEP---QTPLEGVVLRAGHVADAVLFLACRDSE 248
           P  + TP+   A  M   E    VE+  E    Q P+ G + R   VA+ V FLA   S 
Sbjct: 182 PGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVAEVVAFLASDRSS 240
Query: 249 FVTGHDLVVDGGFL 262
           F+TG  L VDGG L
Sbjct: 241 FITGACLTVDGGLL 254

>pdb|2PD6|A Chain A, Structure Of Human Hydroxysteroid Dehydrogenase Type 8, Hsd17b8 Length = 264

Iteration: 1
 Score =  108 bits (270), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 133/264 (50%), Gaps = 18/264 (6%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-------- 61
           +N+L   +A++TG  SGIG   +   A  GA  +   D+     ++    +G        
Sbjct: 2   QNRLRSALALVTGAGSGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGP 60
Query: 62  -VGKCHYVHCDVTNECQVKALVDSTVQNYGQL-DIMFSNAGILSSSDQTVLDLDFSAFDR 119
             G       DV+     + L++     + +   ++ S AGI  + D+ +L +    +D+
Sbjct: 61  PRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI--TQDEFLLHMSEDDWDK 118
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           + A+N++G     + AA+ +V  G RGSI+  +S+ G  G   +T+Y  SK  VIGL ++
Sbjct: 119 VIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQT 178
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
           A+ +LG HGIR N V P  +ATP+T     +P   V+K+ E   P+ G +     VAD V
Sbjct: 179 AARELGRHGIRCNSVLPGFIATPMTQK---VPQKVVDKITE-MIPM-GHLGDPEDVADVV 233
Query: 240 LFLACRDSEFVTGHDLVVDGGFLI 263
            FLA  DS ++TG  + V GG  +
Sbjct: 234 AFLASEDSGYITGTSVEVTGGLFM 257

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score =  108 bits (269), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 136/283 (48%), Gaps = 38/283 (13%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVI------------ADIQDELGRQVATS 59
           K+EGKVA ITG A G G + A   A  GA +I I                D+L   V   
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQV 84
Query: 60  IGVGKCHYV-HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD-LDFSAF 117
             +G+       DV +   ++A VD  V   G+LDI+ +NA +  +S+ T L+ +D   +
Sbjct: 85  EALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAAL--ASEGTRLNRMDPKTW 142
Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
             +  +N+ G     + A   ++ G   GSIV T+S+ G  G +   +Y  SKH + GL+
Sbjct: 143 RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLM 202
Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP--QTP----------- 224
           R+ +++LG   IRVN V P  +ATP+  +      +   ++F P  + P           
Sbjct: 203 RTMALELGPRNIRVNIVCPSSVATPMLLN------EPTYRMFRPDLENPTVEDFQVASRQ 256
Query: 225 ---LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
              L    +    +++A+LFL   D+ ++TG  L VDGG L++
Sbjct: 257 MHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK 299

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score =  107 bits (267), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 125/253 (49%), Gaps = 7/253 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEGKV +ITG ++G+G++ A  FA   A+++V    +++    V   I    G+   V  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV S ++ +G+LD+M +NAG+   +  +  ++  S ++++   N+ G   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  + ++ +++    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIR 182
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G +     +A    +LA  ++ +V
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRAD--VESMIPM-GYIGEPEEIAAVAAWLASSEASYV 239
Query: 251 TGHDLVVDGGFLI 263
           TG  L  DGG  +
Sbjct: 240 TGITLFADGGMTL 252

>pdb|4E6P|A Chain A, Crystal Structure Of A Probable Sorbitol Dehydrogenase (Target Psi- 012078) From Sinorhizobium Meliloti 1021 Length = 259

Iteration: 1
 Score =  106 bits (264), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 126/257 (49%), Gaps = 12/257 (4%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +LEGK A+ITG A GIG   A  +   GA  + IADI  E  RQ A  IG    + V  
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEIGPA-AYAVQX 61
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT +  + A + +TV++ G LDI+ +NA +   +   ++++   ++++LFAINV G   
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAALFDLA--PIVEITRESYEKLFAINVAGTLF 119
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ AAR  +  G  G I+  AS AG  G      Y  +K AVI L +SA + L  H I 
Sbjct: 120 TLQAAARQXIAQGRGGKIINXASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179
Query: 191 VNCVSPHGL-------ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           VN ++P  +          L       P  E ++L     P  G    A  +    +FLA
Sbjct: 180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRXGTAEDLTGXAIFLA 238
Query: 244 CRDSEFVTGHDLVVDGG 260
             +S+++      VDGG
Sbjct: 239 SAESDYIVSQTYNVDGG 255

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 124/251 (49%), Gaps = 7/251 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEGKV +ITG ++G+G++ A  FA   A+++V    +++    V   I    G+   V  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV S ++ +G+LD+M +NAG+  ++  +  ++  S ++++   N+ G   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGL--ANPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G +     +A    +LA  ++ +V
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRAD--VESMIPM-GYIGEPEEIAAVAAWLASSEASYV 239
Query: 251 TGHDLVVDGGF 261
           TG  L  DGG 
Sbjct: 240 TGITLFADGGM 250

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score =  106 bits (264), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 7/253 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEGKV +ITG ++G+G++ A  FA   A+++V    +++    V   I    G+   V  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV S ++ +G+LD+M +NAG+   +  +  ++  S ++++   N+ G   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G +     +A    +LA  ++ +V
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRAD--VESMIPM-GYIGEPEEIAAVAAWLASSEASYV 239
Query: 251 TGHDLVVDGGFLI 263
           TG  L  DGG  +
Sbjct: 240 TGITLFADGGMTL 252

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 7/251 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEGKV +ITG ++G+G++ A  FA   A+++V    +++    V   I    G+   V  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV S ++ +G+LD+M +NAG+   +  +  ++  S ++++   N+ G   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFL 122
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G +     +A    +LA  ++ +V
Sbjct: 183 VNNIGPGAINTPINAEKFADPEQRAD--VESMIPM-GYIGEPEEIAAVAAWLASSEASYV 239
Query: 251 TGHDLVVDGGF 261
           TG  L  DGG 
Sbjct: 240 TGITLFADGGM 250

>pdb|2D1Y|A Chain A, Crystal Structure Of Tt0321 From Thermus Thermophilus Hb8 Length = 256

Iteration: 1
 Score =  105 bits (262), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 127/260 (48%), Gaps = 33/260 (12%)
Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
           GK  ++TGGA GIG   A+ FA  GA ++ + D++ E G++VA +IG     +   D+ +
Sbjct: 6   GKGVLVTGGARGIGRAIAQAFAREGA-LVALCDLRPE-GKEVAEAIG---GAFFQVDLED 60
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
           E +    V+      G++D++ +NA I  ++  + L +    + R+  +N+         
Sbjct: 61  ERERVRFVEEAAYALGRVDVLVNNAAI--AAPGSALTVRLPEWRRVLEVNLTAPMHLSAL 118
Query: 135 AARVMVE-GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
           AAR M + GG  G+IV  ASV G    +    Y+ SK  ++ L RS ++ L    IRVN 
Sbjct: 119 AAREMRKVGG--GAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNA 176
Query: 194 VSPHGLATPLTCHAYGMPADE------------VEKLFEPQTPLEGVVLRAGHVADAVLF 241
           V+P  +AT     A  +  D             + +L +P+            VA+AVLF
Sbjct: 177 VAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPE-----------EVAEAVLF 225
Query: 242 LACRDSEFVTGHDLVVDGGF 261
           LA   + F+TG  L VDGG 
Sbjct: 226 LASEKASFITGAILPVDGGM 245

>pdb|3AK4|A Chain A, Crystal Structure Of Nadh-Dependent Quinuclidinone Reductase From Agrobacterium Tumefaciens Length = 263

Iteration: 1
 Score =  105 bits (262), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 119/255 (46%), Gaps = 12/255 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+ AI+TGG+ GIG   AR     GA  + IAD+     + V   +  G    V  DV
Sbjct: 10  LSGRKAIVTGGSKGIGAAIARALDKAGA-TVAIADLDVMAAQAVVAGLENGG-FAVEVDV 67
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T    V A +   +   G  D++ +NAG+  S+ +  +D+    +D  F +N RG+    
Sbjct: 68  TKRASVDAAMQKAIDALGGFDLLCANAGV--STMRPAVDITDEEWDFNFDVNARGVFLAN 125
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A R  +    +G IV TAS+A   G      Y  SK AV G  ++ + ++    IRVN
Sbjct: 126 QIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVN 185
Query: 193 CVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           CV P  + T +            GM  + V   +   TPL G +     VAD V+FLA  
Sbjct: 186 CVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADVVVFLASD 244
Query: 246 DSEFVTGHDLVVDGG 260
            + F+TG  + V GG
Sbjct: 245 AARFMTGQGINVTGG 259

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score =  105 bits (261), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/282 (31%), Positives = 130/282 (46%), Gaps = 40/282 (14%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVI------------ADIQDELGRQVATS 59
           ++EGKVA +TG A G G + A   A  GA +I +              I       +A +
Sbjct: 8   RVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAET 67
Query: 60  IGVGKCH-----YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF 114
             + K H         DV +   +KA VDS V+  G+LDI+ +NAGI +  D T+     
Sbjct: 68  ADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGD-TLDKTSE 126
Query: 115 SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
             +  +  IN+ G+   VK     M+ GG  GSI+ T+SV G         Y  +KH V+
Sbjct: 127 EDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVV 186
Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP--QTP-------- 224
           GL+R+  V+LG H IRVN V P  + TP+  H  G       K+F P  + P        
Sbjct: 187 GLMRAFGVELGQHMIRVNSVHPTHVKTPM-LHNEG-----TFKMFRPDLENPGPDDMAPI 240
Query: 225 ------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
                 L    +    +++AVLF A  ++ ++TG  L +D G
Sbjct: 241 CQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAG 282

>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL Dehydrogenase From Clostridium Thermocellum Length = 247

Iteration: 1
 Score =  104 bits (260), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 132/264 (50%), Gaps = 30/264 (11%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY---- 67
           +L+GK AI+TG + G+G+  A    + GA +++        G   +TS+      +    
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVL-------NGSPASTSLDATAEEFKAAG 54
Query: 68  -----VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
                   DV N   V+ +V + +  +G++DI+ +NAGI  + D  +L +    +D +  
Sbjct: 55  INVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGI--TRDTLMLKMSEKDWDDVLN 112
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
            N++    C K  +++M++    G I+   S+AG  G   + +Y  SK  +IG  +S + 
Sbjct: 113 TNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAK 171
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAV 239
           +    GI  N V+P  + T +T     +P D+V++++    PL+    R G    VA+ V
Sbjct: 172 EFAAKGIYCNAVAPGIIKTDMTDV---LP-DKVKEMYLNNIPLK----RFGTPEEVANVV 223
Query: 240 LFLACRDSEFVTGHDLVVDGGFLI 263
            FLA  DS ++TG  + +DGG ++
Sbjct: 224 GFLASDDSNYITGQVINIDGGLVM 247

>pdb|1XKQ|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE OF Unknown Function From Caenorhabditis Elegans With Cofactor Length = 280

Iteration: 1
 Score =  104 bits (260), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/263 (31%), Positives = 130/263 (49%), Gaps = 18/263 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIGVG--KCHY 67
           +   K  IITG ++GIG TTA LFA  GA + +     + L   RQ+    GV   + + 
Sbjct: 3   RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNS 62
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAINV 125
           V  DVT E     +++ST++ +G++D++ +NAG  I  +   T  D     + +   +N+
Sbjct: 63  VVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNL 122
Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           + +    K     +V    +G IV  +S VAG         Y ++K A+    RS ++ L
Sbjct: 123 QAVIEMTKKVKPHLVAS--KGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 180
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT------PLEGVVLRAGHVADA 238
              GIRVN VSP  + T  T +A GMP    +K +          P+ G   +  H+A+ 
Sbjct: 181 AKFGIRVNSVSPGMVETGFT-NAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANI 238
Query: 239 VLFLACRD-SEFVTGHDLVVDGG 260
           +LFLA R+ S ++ G  +V DGG
Sbjct: 239 ILFLADRNLSFYILGQSIVADGG 261

>pdb|2A4K|A Chain A, 3-Oxoacyl-[acyl Carrier Protein] Reductase From Thermus Thermophilus Tt0137 Length = 263

Iteration: 1
 Score =  103 bits (258), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 127/250 (50%), Gaps = 13/250 (5%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L GK  ++TG ASGIG     LFA  GA ++ + D ++ L  +   ++       V  
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGASLVAV-DREERLLAEAVAALEAEAIAVV-A 59
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++   V+A+    ++ +G+L  +   AG+  S+     +L   A++++  +N+ G   
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHSA--LSWNLPLEAWEKVLRVNLTGSFL 117
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A  V+ EG   GS+V T SVAG  G      Y   K  V+GL R+ +++L   G+R
Sbjct: 118 VARKAGEVLEEG---GSLVLTGSVAG-LGAFGLAHYAAGKLGVVGLARTLALELARKGVR 173
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+T    G+P    E+     +PL G   R   VA A LFL   +S ++
Sbjct: 174 VNVLLPGLIQTPMTA---GLPPWAWEQEVG-ASPL-GRAGRPEEVAQAALFLLSEESAYI 228
Query: 251 TGHDLVVDGG 260
           TG  L VDGG
Sbjct: 229 TGQALYVDGG 238

>pdb|3SJ7|A Chain A, Structure Of Beta-Ketoacetyl-Coa Reductase (Fabg) From Staphylococcus Aureus Complex With Nadph Length = 252

Iteration: 1
 Score =  103 bits (258), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 129/254 (50%), Gaps = 18/254 (7%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDV 72
           K A++TG + GIG + A   A+ G  + V      E    V   I   GV     +  +V
Sbjct: 11  KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANV 69
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +  +VKA++   V  +G LD++ +NAGI  + D  ++ +    +D +   N++G+  C+
Sbjct: 70  ADADEVKAMIKEVVSQFGSLDVLVNNAGI--TRDNLLMRMKEQEWDDVIDTNLKGVFNCI 127
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A   M+     G+I+  +SV G+ G   + +Y  +K  VIGL +SA+ +L   GI VN
Sbjct: 128 QKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 186
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSEF 249
            V+P  + + +T       +DE+++    Q PL     R G    +A+ V FLA   +++
Sbjct: 187 AVAPGFIVSDMTDAL----SDELKEQMLTQIPLA----RFGQDTDIANTVAFLASDKAKY 238
Query: 250 VTGHDLVVDGGFLI 263
           +TG  + V+GG  +
Sbjct: 239 ITGQTIHVNGGMYM 252

>pdb|3I3O|A Chain A, 2.06 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad-acetone Length = 291

Iteration: 1
 Score =  103 bits (257), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 128/262 (48%), Gaps = 24/262 (9%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-----RQVATSIGVGKCH 66
           KL+GK  +ITGG SGIG   +  FA  GA  I IA + DE G     +Q     GV KC 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGAN-IAIAYL-DEEGDANETKQYVEKEGV-KCV 100
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            +  D+++E   K +V  TV+  G L+I+ +N        Q +  +     ++ F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRINIF 159
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                 K A   + +G V   I+ TAS+    G +   DY  +K A++   RS S  L  
Sbjct: 160 SYFHVTKAALSHLKQGDV---IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQ 216
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVE-KLFEPQTPLEGVVLRAGH---VADAVLFL 242
            GIRVN V+P  + TPL   ++    DE +   F    P++    R G    +A A ++L
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSF----DEKKVSQFGSNVPMQ----RPGQPYELAPAYVYL 268
Query: 243 ACRDSEFVTGHDLVVDGGFLIR 264
           A  DS +VTG  + V+GG ++ 
Sbjct: 269 ASSDSSYVTGQMIHVNGGVIVN 290

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score =  103 bits (256), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 126/264 (47%), Gaps = 20/264 (7%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
           K  GKV ++TG    IG  TA   A+ G   I + D+  E   +   S+   GV    YV
Sbjct: 4   KFNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYV 62
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDVT+E  V   VDS V+++G++D +F+NAG    +   V D     F R+  INV G 
Sbjct: 63  -CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAG-YQGAFAPVQDYPSDDFARVLTINVTGA 120
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              +K  +R M+     G IV TAS+AG  G      Y  SK A+I L  +A++ L  + 
Sbjct: 121 FHVLKAVSRQMITQNY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179
Query: 189 IRVNCVSPHGLATP--LTCHAYGMPADEVEKLF--EP----QTPLEGVVLR----AGHVA 236
           IRVN +SP G   P  +      + A    + F  +P    Q  +  V +R       + 
Sbjct: 180 IRVNAISP-GYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMRRYGDINEIP 238
Query: 237 DAVLFLACRDSEFVTGHDLVVDGG 260
             V FL   DS F+TG +L + GG
Sbjct: 239 GVVAFLLGDDSSFMTGVNLPIAGG 262

>pdb|3IJR|A Chain A, 2.05 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' In Complex With Nad+ Length = 291

Iteration: 1
 Score =  102 bits (255), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 127/262 (48%), Gaps = 24/262 (9%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-----RQVATSIGVGKCH 66
           KL+GK  +ITGG SGIG   +  FA  GA  I IA + DE G     +Q     GV KC 
Sbjct: 44  KLKGKNVLITGGDSGIGRAVSIAFAKEGAN-IAIAYL-DEEGDANETKQYVEKEGV-KCV 100
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            +  D+++E   K +V  TV+  G L+I+ +N        Q +  +     ++ F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVA-QQYPQQGLEYITAEQLEKTFRINIF 159
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                 K A   + +G V   I+ TAS+    G +   DY  +K A++   RS S  L  
Sbjct: 160 SYFHVTKAALSHLKQGDV---IINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQ 216
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVE-KLFEPQTPLEGVVLRAGH---VADAVLFL 242
            GIRVN V+P  + TPL   ++    DE +   F    P +    R G    +A A ++L
Sbjct: 217 KGIRVNGVAPGPIWTPLIPSSF----DEKKVSQFGSNVPXQ----RPGQPYELAPAYVYL 268
Query: 243 ACRDSEFVTGHDLVVDGGFLIR 264
           A  DS +VTG  + V+GG ++ 
Sbjct: 269 ASSDSSYVTGQXIHVNGGVIVN 290

>pdb|3FTP|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Burkholderia Pseudomallei At 2.05 A Resolution Length = 270

Iteration: 1
 Score =  102 bits (253), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 129/257 (50%), Gaps = 19/257 (7%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG------KCH 66
           L+ +VAI+TG + GIG   A   A  GA  +VI     E G   A  IG        +  
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGA--MVIGTATTEAG---AEGIGAAFKQAGLEGR 80
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
               +V +   V ALV+ST++ +G L+++ +NAGI  + DQ  + +    +D +   N++
Sbjct: 81  GAVLNVNDATAVDALVESTLKEFGALNVLVNNAGI--TQDQLAMRMKDDEWDAVIDTNLK 138
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            +    +   R M++    G IV   SV GS G   + +Y  +K  V G+ R+ + ++G 
Sbjct: 139 AVFRLSRAVLRPMMKA-RGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGS 197
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            GI VNCV+P  + T +T    G+P  E +   + Q PL G +     +A AV FLA   
Sbjct: 198 RGITVNCVAPGFIDTDMT---KGLP-QEQQTALKTQIPL-GRLGSPEDIAHAVAFLASPQ 252
Query: 247 SEFVTGHDLVVDGGFLI 263
           + ++TG  L V+GG  +
Sbjct: 253 AGYITGTTLHVNGGMFM 269

>pdb|3TZH|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(F187a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score =  101 bits (252), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA++TG + GIG+  A L A+ GA+  VI     E G Q  +         +  +
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTN   ++A++ +    +G +DI+ +NAGI  + D  ++ +    +  +   N+  +   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++   +G I+   SV G+ G   + +Y  +K  VIG  +S + ++   G+ V
Sbjct: 125 SKAVLRGMMKK-RQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T        DE       Q P  G +     +A AV FLA  ++ ++T
Sbjct: 184 NTVAPGAIETDMTKALN----DEQRTATLAQVP-AGRLGDPREIASAVAFLASPEAAYIT 238
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 239 GETLHVNGGMYM 250

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 7/251 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--IADIQDELGRQVATSIGVGKCHYVHC 70
           L+ KV +ITGG++G+G   A  F    A++++    + ++ L  +       G+   V  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV + ++ +G LD+M +NAG+ +      L LD   ++++   N+ G   
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD--NWNKVIDTNLTGAFL 130
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G + +   VA    FLA   + +V
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRAD--VESMIPM-GYIGKPEEVAAVAAFLASSQASYV 247
Query: 251 TGHDLVVDGGF 261
           TG  L  DGG 
Sbjct: 248 TGITLFADGGM 258

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 118/251 (47%), Gaps = 7/251 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--IADIQDELGRQVATSIGVGKCHYVHC 70
           L+ KV +ITGG++G+G   A  F    A++++    + ++ L  +       G+   V  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV + ++ +G LD+M +NAG+ +      L LD   ++++   N+ G   
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD--NWNKVIDTNLTGAFL 130
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G + +   VA    FLA   + +V
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRAD--VESMIPM-GYIGKPEEVAAVAAFLASSQASYV 247
Query: 251 TGHDLVVDGGF 261
           TG  L  DGG 
Sbjct: 248 TGITLFADGGM 258

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score =  101 bits (251), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 118/250 (47%), Gaps = 7/250 (2%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--IADIQDELGRQVATSIGVGKCHYVHC 70
           L+ KV +ITGG++G+G   A  F    A++++    + ++ L  +       G+   V  
Sbjct: 13  LKDKVVVITGGSTGLGRAMAVRFGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAIIVQG 72
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV + ++ +G LD+M +NAG+ +      L LD   ++++   N+ G   
Sbjct: 73  DVTKEEDVVNLVQTAIKEFGTLDVMINNAGVENPVPSHELSLD--NWNKVIDTNLTGAFL 130
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 131 GSREAIKYFVENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 190
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+    +  P    +   E   P+ G + +   VA    FLA   + +V
Sbjct: 191 VNNIGPGAMNTPINAEKFADPVQRAD--VESMIPM-GYIGKPEEVAAVAAFLASSQASYV 247
Query: 251 TGHDLVVDGG 260
           TG  L  DGG
Sbjct: 248 TGITLFADGG 257

>pdb|1GEG|A Chain A, Cryatal Structure Analysis Of Meso-2,3-Butanediol Dehydrogenase Length = 256

Iteration: 1
 Score =  100 bits (249), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 122/259 (47%), Gaps = 15/259 (5%)
Query: 16  KVAIITGGASGIGETTA-RLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV--HCDV 72
           KVA++TG   GIG+  A RL  D  A  + IAD  D   + VA+ I     H V    DV
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFA--VAIADYNDATAKAVASEINQAGGHAVAVKVDV 60
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++  QV A V+   +  G  D++ +NAG+  S+   +  +     D+++ INV+G+   +
Sbjct: 61  SDRDQVFAAVEQARKTLGGFDVIVNNAGVAPST--PIESITPEIVDKVYNINVKGVIWGI 118
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A     + G  G I+   S AG  G      Y  SK AV GL ++A+  L   GI VN
Sbjct: 119 QAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN 178
Query: 193 CVSPHGLATPLTCH-------AYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
              P  + TP+          A G P       F  +  L G +     VA  V +LA  
Sbjct: 179 GYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASP 237
Query: 246 DSEFVTGHDLVVDGGFLIR 264
           DS+++TG  L++DGG +  
Sbjct: 238 DSDYMTGQSLLIDGGMVFN 256

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score =  100 bits (249), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 124/254 (48%), Gaps = 17/254 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ K  +ITG A GIG  T  LFA  GAR+ V  DI++   R+ A ++G    H V  D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGARL-VACDIEEGPLREAAEAVG---AHPVVXD 57
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +   V+      + + G+LD +   AGI  + D          ++ +  +N+ G    
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI--TRDNFHWKXPLEDWELVLRVNLTGSFLV 115
Query: 132 VKHAARVMVEGGVRGSIVCTAS--VAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            K A+    E    GSIV TAS    G+ G   + +Y  S   V+GL R+ +++LG  GI
Sbjct: 116 AKAASEAXREKNP-GSIVLTASRVYLGNLG---QANYAASXAGVVGLTRTLALELGRWGI 171
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RVN ++P  + T  T     +P    EK     TPL G   +   VA A LFL   +S F
Sbjct: 172 RVNTLAPGFIETRXTAK---VPEKVREKAIA-ATPL-GRAGKPLEVAYAALFLLSDESSF 226
Query: 250 VTGHDLVVDGGFLI 263
           +TG  L VDGG  I
Sbjct: 227 ITGQVLFVDGGRTI 240

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/295 (27%), Positives = 129/295 (43%), Gaps = 56/295 (18%)
Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIV------------------- 44
           S +      L+G+VA ITG A G G + A   A  GA +I                    
Sbjct: 4   SMVAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPE 63
Query: 45  ----IADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG 100
                A + ++ GR+  T +          DV ++  ++ LV   ++ +G+LD++ +NAG
Sbjct: 64  DLDETARLVEDQGRKALTRV---------LDVRDDAALRELVADGMEQFGRLDVVVANAG 114
Query: 101 ILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG 160
           +LS     V +L    +D +  +N+ G    ++     M+E G  GSIV  +S AG    
Sbjct: 115 VLSWG--RVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKAT 172
Query: 161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE 220
                Y  SKH +  L  + +++LG +GIRVN + P+ + TP+          E E + E
Sbjct: 173 PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI---------EPEAMME 223
Query: 221 ------------PQTPLE-GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL 262
                       P  P++    + A  VAD V +LA   S  +TG  + VD G L
Sbjct: 224 IFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>pdb|3RSH|A Chain A, Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein)reductase (Fabg) From Vibrio Cholerae O1 Complexed With Nadp+ (Space Group P62) Length = 251

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 123/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA++TG + GIG+  A L A+ GA+  VI     E G Q  +         +  +
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTN   ++A++ +    +G +DI+ +NAGI  + D  ++ +    +  +   N+  +   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++   +G I+   SV G+ G   + +Y  +K  VIG  +S + ++   G+ V
Sbjct: 125 SKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T        DE       Q P  G +     +A AV FLA  ++ ++T
Sbjct: 184 NTVAPGFIETDMTKALN----DEQRTATLAQVP-AGRLGDPREIASAVAFLASPEAAYIT 238
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 239 GETLHVNGGMYM 250

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/278 (29%), Positives = 128/278 (46%), Gaps = 27/278 (9%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI-------------QDELGRQVA 57
           N+L+GKVA ITG A G G T A   A  GA ++ I D+              +EL   V 
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAI-DLCRQQPNLDYAQGSPEELKETVR 100
Query: 58  TSIGVGKCHYV-HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
                G+       DV +   ++A+VD  +  +G +DI+ SN GI  S+   V+ L    
Sbjct: 101 LVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGI--SNQGEVVSLTDQQ 158
Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           +  +   N+ G     +     M+E G  GS++  +S  G  G   ++ Y  SKH V GL
Sbjct: 159 WSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGL 218
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTC----------HAYGMPADEVEKLFEPQTPLE 226
           + S + ++G H IRVN V+P  + T +            H      ++  +LF   T L 
Sbjct: 219 MLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLLP 278
Query: 227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
              +    V++AV +LA  ++ ++ G  + VDGG L R
Sbjct: 279 IPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316

>pdb|4DML|A Chain A, 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Synechococcus Elongatus Pcc 7942 Length = 269

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 128/264 (48%), Gaps = 34/264 (12%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV---- 68
           L  ++A++TG + GIG   A   A  GA++ V            A+S G           
Sbjct: 26  LTDRIALVTGASRGIGRAIALELAAAGAKVAV----------NYASSAGAADEVVAAIAA 75
Query: 69  --------HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
                     DV+ E +V+AL  + ++ +G+LD++ +NAGI  + D  +L +    +  +
Sbjct: 76  AGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGI--TRDTLLLRMKRDDWQSV 133
Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
             +N+ G+  C + AA++M++    G I+  ASV G  G   + +Y  +K  VIGL ++ 
Sbjct: 134 LDLNLGGVFLCSRAAAKIMLKQ-RSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTV 192
Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
           + +L   GI VN V+P  +AT +T           EKL E   PL G    A  VA  V 
Sbjct: 193 AKELASRGITVNAVAPGFIATDMTSEL------AAEKLLE-VIPL-GRYGEAAEVAGVVR 244
Query: 241 FLACRD-SEFVTGHDLVVDGGFLI 263
           FLA    + ++TG  + +DGG ++
Sbjct: 245 FLAADPAAAYITGQVINIDGGLVM 268

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score =  100 bits (248), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 122/269 (45%), Gaps = 23/269 (8%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADI--------------QDELGRQVA 57
           KLEG+VA ITG A G G   A   A  GA +I + DI               D+L   V 
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGADIIAV-DIAGKLPSCVPYDPASPDDLSETVR 66
Query: 58  TSIGVGKCHYVHC-DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
                 +       D  +  +++ +VD  V   G+LDI+ +NAG+  ++ Q   D+    
Sbjct: 67  LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGV--AAPQAWDDITPED 124
Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           F  +  INV G    V   A  ++EGG  GSI+  +S AG         Y  SKHAV GL
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGL 184
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPL----TCHAYGMPADEVEKLFEPQTP-LEGVVLR 231
            R+ + +LG H IRVN V P  + TP+       A G   +   +L    TP L   V  
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLPDWVAE 244
Query: 232 AGHVADAVLFLACRDSEFVTGHDLVVDGG 260
              +AD V +LA  +S  VT   + VD G
Sbjct: 245 PEDIADTVCWLASDESRKVTAAQIPVDQG 273

>pdb|4ESO|A Chain A, Crystal Structure Of A Putative Oxidoreductase Protein From Sinorhizobium Meliloti 1021 In Complex With Nadp Length = 255

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 35/262 (13%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKCH 66
           +GK AI+ GG  G G  T R   + GA +++       IA I++E G +V         H
Sbjct: 7   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRV---------H 57
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFDRLFAIN 124
            +  D+ +  ++  L  +  Q  G +D++  NAG+  L   DQ    +  +++DR FA+N
Sbjct: 58  ALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQ----VSEASYDRQFAVN 113
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
            +G    V+    ++ EGG   SIV T+SVA   G    + Y  SK A++      + +L
Sbjct: 114 TKGAFFTVQRLTPLIREGG---SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAEL 170
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAG---HVADAV 239
              GIRVN VSP  + TP    A    A+  E + L +  TP +    R G    VA AV
Sbjct: 171 LPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXK----RNGTADEVARAV 226
Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
           LFLA  ++ F TG  L VDGG 
Sbjct: 227 LFLAF-EATFTTGAKLAVDGGL 247

>pdb|3VC7|A Chain A, Crystal Structure Of A Putative Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 254

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 128/262 (48%), Gaps = 35/262 (13%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKCH 66
           +GK AI+ GG  G G  T R   + GA +++       IA I++E G +V         H
Sbjct: 6   QGKKAIVIGGTHGXGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRV---------H 56
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFDRLFAIN 124
            +  D+ +  ++  L  +  Q  G +D++  NAG+  L   DQ    +  +++DR FA+N
Sbjct: 57  ALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQ----VSEASYDRQFAVN 112
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
            +G    V+    ++ EGG   SIV T+SVA   G    + Y  SK A++      + +L
Sbjct: 113 TKGAFFTVQRLTPLIREGG---SIVFTSSVADEGGHPGXSVYSASKAALVSFASVLAAEL 169
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAG---HVADAV 239
              GIRVN VSP  + TP    A    A+  E + L +  TP +    R G    VA AV
Sbjct: 170 LPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPXK----RNGTADEVARAV 225
Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
           LFLA  ++ F TG  L VDGG 
Sbjct: 226 LFLAF-EATFTTGAKLAVDGGL 246

>pdb|2PNF|A Chain A, Structure Of Aquifex Aeolicus Fabg 3-oxoacyl-(acyl-carrier Protein) Reductase Length = 248

Iteration: 1
 Score = 99.0 bits (245), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 126/254 (49%), Gaps = 12/254 (4%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYV 68
           KL+GKV+++TG   GIG   A   A  G+ +I+     +    +  ++A   GV K H V
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGV 62
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             ++ +E  +    +        +DI+ +NAGI  + D+  L +    ++ +  +N+ G 
Sbjct: 63  EMNLLSEESINKAFEEIYNLVDGIDILVNNAGI--TRDKLFLRMSLLDWEEVLKVNLTGT 120
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               +++ R M++    G IV  +SV G  G   + +Y  +K  +IG  +S + +L    
Sbjct: 121 FLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRN 179
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           + VN V+P  + T +T     + ++E+++ ++ Q PL G       VA+ VLFL    + 
Sbjct: 180 VLVNAVAPGFIETDMTA----VLSEEIKQKYKEQIPL-GRFGSPEEVANVVLFLCSELAS 234
Query: 249 FVTGHDLVVDGGFL 262
           ++TG  + V+GG  
Sbjct: 235 YITGEVIHVNGGMF 248

>pdb|3TZC|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(Y155f) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 123/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA++TG + GIG+  A L A+ GA+  VI     E G Q  +         +  +
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTN   ++A++ +    +G +DI+ +NAGI  + D  ++ +    +  +   N+  +   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++   +G I+   SV G+ G   + ++  +K  VIG  +S + ++   G+ V
Sbjct: 125 SKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANFAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T        DE       Q P  G +     +A AV FLA  ++ ++T
Sbjct: 184 NTVAPGFIETDMTKALN----DEQRTATLAQVP-AGRLGDPREIASAVAFLASPEAAYIT 238
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 239 GETLHVNGGMYM 250

>pdb|3AWD|A Chain A, Crystal Structure Of Gox2181 Length = 260

Iteration: 1
 Score = 98.6 bits (244), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 131/264 (49%), Gaps = 10/264 (3%)
Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG 63
           S M   K +L+ +VAI+TGGA  IG       A+ GAR ++IAD+ + +  +    + + 
Sbjct: 2   SHMYMEKLRLDNRVAIVTGGAQNIGLACVTALAEAGAR-VIIADLDEAMATKAVEDLRME 60
Query: 64  --KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
                 V  DVTN   V+  V S  +  G++DI+ + AGI   S+    D+    + +  
Sbjct: 61  GHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQV 119
Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK--RRTDYHMSKHAVIGLVRS 179
            IN+ GM    +   R+M+E   +G IV   S++G    +  ++  Y+ SK  V   +RS
Sbjct: 120 DINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRS 178
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
            + +   HGIR N V+P  + T LT   +GM   E+   +   TP+ G V +   VA  V
Sbjct: 179 LAAEWAPHGIRANAVAPTYIETTLT--RFGMEKPELYDAWIAGTPM-GRVGQPDEVASVV 235
Query: 240 LFLACRDSEFVTGHDLVVDGGFLI 263
            FLA   +  +TG  + VD GF +
Sbjct: 236 QFLASDAASLMTGAIVNVDAGFTV 259

>pdb|3TZK|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92a) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA++TG + GIG+  A L A+ GA+  VI     E G Q  +         +  +
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTN   ++A++ +    +G +DI+ +NA I  + D  ++ +    +  +   N+  +   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNAAI--TRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++   +G I+   SV G+ G   + +Y  +K  VIG  +S + ++   G+ V
Sbjct: 125 SKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T        DE       Q P  G +     +A AV FLA  ++ ++T
Sbjct: 184 NTVAPGFIETDMTKALN----DEQRTATLAQVP-AGRLGDPREIASAVAFLASPEAAYIT 238
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 239 GETLHVNGGMYM 250

>pdb|3F9I|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase Rickettsia Prowazekii Length = 249

Iteration: 1
 Score = 98.2 bits (243), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 34/261 (13%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH--C 70
           L GK ++ITG +SGIG   ARL    G+++I+    +++L + +  ++   K +Y    C
Sbjct: 12  LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKL-KSLGNAL---KDNYTIEVC 67
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           ++ N+ +   L+  T      LDI+  NAGI  +SD   + +    FD++  IN++    
Sbjct: 68  NLANKEECSNLISKT----SNLDILVCNAGI--TSDTLAIRMKDQDFDKVIDINLKANFI 121
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A + M++    G I+  +S+ G  G   + +Y  SK  +IG+ +S S ++   GI 
Sbjct: 122 LNREAIKKMIQKRY-GRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR--------AGHVADAVLFL 242
           VN V+P  + + +T           +KL E Q   E +V +           VA AV FL
Sbjct: 181 VNAVAPGFIKSDMT-----------DKLNEKQR--EAIVQKIPLGTYGIPEDVAYAVAFL 227
Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
           A  ++ ++TG  L V+GG L+
Sbjct: 228 ASNNASYITGQTLHVNGGMLM 248

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 97.8 bits (242), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 130/264 (49%), Gaps = 13/264 (4%)
Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           MA S M   ++ L  KVA++T    GIG   AR  A  GA ++V +  Q  + + VAT  
Sbjct: 2   MASSGMTR-RDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQ 60
Query: 61  GVG-KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
           G G       C V      + LV + V+ +G +DI+ SNA + +    +++D+    +D+
Sbjct: 61  GEGLSVTGTVCHVGKAEDRERLVATAVKLHGGIDILVSNAAV-NPFFGSIMDVTEEVWDK 119
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
              INV+  A   K     M + G  GS+V  +S+A        + Y++SK A++GL ++
Sbjct: 120 TLDINVKAPALMTKAVVPEMEKRG-GGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKT 178
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD-- 237
            +++L    IRVNC++P  + T  +   + M  ++ E + E        + R G   D  
Sbjct: 179 LAIELAPRNIRVNCLAPGLIKTSFSRMLW-MDKEKEESMKETLR-----IRRLGEPEDCA 232
Query: 238 -AVLFLACRDSEFVTGHDLVVDGG 260
             V FL   D+ ++TG  +VV GG
Sbjct: 233 GIVSFLCSEDASYITGETVVVGGG 256

>pdb|2NM0|A Chain A, Crystal Structure Of Sco1815: A Beta-Ketoacyl-Acyl Carrier Protein Reductase From Streptomyces Coelicolor A3(2) Length = 253

Iteration: 1
 Score = 97.4 bits (241), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           ++TGG  GIG   AR FAD G ++ +     +     +A          V CD+T+  QV
Sbjct: 25  LVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGFLA----------VKCDITDTEQV 74
Query: 79  KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV 138
           +       + +G ++++ +NAG+  + DQ ++ +    F  +   N+ G    VK A R 
Sbjct: 75  EQAYKEIEETHGPVEVLIANAGV--TKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRA 132
Query: 139 MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG 198
           M+    +G +V  +SV G  G   + +Y  SK  ++G  RS + +LG   I  N V+P  
Sbjct: 133 MLRAK-KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGF 191
Query: 199 LATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVD 258
           + T +T     +  DE       Q PL G   R   +A  V FLA  D+ ++TG  + VD
Sbjct: 192 VDTDMTK----VLTDEQRANIVSQVPL-GRYARPEEIAATVRFLASDDASYITGAVIPVD 246
Query: 259 GGF 261
           GG 
Sbjct: 247 GGL 249

>pdb|3U09|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase (Fabg)(G92d) From Vibrio Cholerae Length = 251

Iteration: 1
 Score = 97.4 bits (241), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA++TG + GIG+  A L A+ GA+  VI     E G Q  +         +  +
Sbjct: 9   NLEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYLGDNGKGMALN 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTN   ++A++ +    +G +DI+ +NA I  + D  ++ +    +  +   N+  +   
Sbjct: 67  VTNPESIEAVLKAITDEFGGVDILVNNADI--TRDNLLMRMKEEEWSDIMETNLTSIFRL 124
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++   +G I+   SV G+ G   + +Y  +K  VIG  +S + ++   G+ V
Sbjct: 125 SKAVLRGMMK-KRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTV 183
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T        DE       Q P  G +     +A AV FLA  ++ ++T
Sbjct: 184 NTVAPGFIETDMTKALN----DEQRTATLAQVP-AGRLGDPREIASAVAFLASPEAAYIT 238
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 239 GETLHVNGGMYM 250

>pdb|3CTM|A Chain A, Crystal Structure Of A Carbonyl Reductase From Candida Parapsilosis With Anti-Prelog Stereo-Specificity Length = 279

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 132/255 (51%), Gaps = 16/255 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ--DELGRQVATSIGVGKCHYVHC 70
           L+GKVA +TG + GIG   A  +A  GA + +  +    DE    +  + GV    Y  C
Sbjct: 32  LKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAY-KC 90
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           ++++   V+  +    +++G +D+  +NAG+  +    +   ++ +++++ ++++ G+  
Sbjct: 91  NISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYY 150
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           C  +  ++  + G +GS++ T+S++G      + +  Y+ +K A   L +S +++     
Sbjct: 151 CSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA 209
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL--EGVVLRAGHVADAVLFLACRD 246
            RVN +SP  + T +T  A    + +++  +   TPL  EG+      +    L+LA   
Sbjct: 210 -RVNTISPGYIDTDITDFA----SKDMKAKWWQLTPLGREGLTQE---LVGGYLYLASNA 261
Query: 247 SEFVTGHDLVVDGGF 261
           S F TG D+V+DGG+
Sbjct: 262 STFTTGSDVVIDGGY 276

>pdb|2Y93|A Chain A, Crystal Structure Of Cis-Biphenyl-2,3-Dihydrodiol-2,3- Dehydrogenase (Bphb)from Pandoraea Pnomenusa Strain B-356. Length = 281

Iteration: 1
 Score = 95.9 bits (237), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 128/265 (48%), Gaps = 20/265 (7%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           KL G+VA+ITGGASG+G      F   GAR+ V+ D   E  R++  + G G    V  D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGARVAVL-DKSAERLRELEVAHG-GNAVGVVGD 59
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF----SAFDRLFAINVRG 127
           V +    K   +  +  +G++D +  NAGI   S   + DL      +AFD +F +NV+G
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYS-TALADLPEDKIDAAFDDIFHVNVKG 118
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               VK     +V    RGS+V T S AG         Y  +KHAV+GLVR  + +L  H
Sbjct: 119 YIHAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH 176
Query: 188 GIRVNCVSPHGLATPLT-CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA------DAVL 240
            +RVN V+P G+ T L    + G+    +  +  P   +   VL  G +        A +
Sbjct: 177 -VRVNGVAPGGMNTDLRGPSSLGLSEQSISSV--PLADMLKSVLPIGRMPALEEYTGAYV 233
Query: 241 FLACR-DSEFVTGHDLVVDGGFLIR 264
           F A R DS   TG  L  DGG  +R
Sbjct: 234 FFATRGDSLPATGALLNYDGGMGVR 258

>pdb|2EW8|A Chain A, Crystal Structure Of The (s)-specific 1-phenylethanol Dehydrogenase Of The Denitrifying Bacterium Strain Ebn1 Length = 249

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 120/269 (44%), Gaps = 41/269 (15%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD---------ELGRQVATSIG 61
            +L+ K+A+ITGGA+GIG   A  FA  GA  I IAD+            LGR+V T   
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPAPEAEAAIRNLGRRVLT--- 58
Query: 62  VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFDR 119
                 V CDV+    V+A     +  +G+ DI+ +NAGI  L   D+    L F  + +
Sbjct: 59  ------VKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPLIPFDE----LTFEQWKK 108
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
            F INV       K     M   G  G I+   S       +  T Y  +K A IG  R+
Sbjct: 109 TFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRA 167
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA------DEVEKLFEPQTPLEGVVLRAG 233
            +  LG  GI VN ++P  L    T  A  + A      + ++ +   Q PL+       
Sbjct: 168 LASDLGKDGITVNAIAPS-LVRTATTEASALSAMFDVLPNMLQAIPRLQVPLD------- 219
Query: 234 HVADAVLFLACRDSEFVTGHDLVVDGGFL 262
            +  A  FLA  D+ F+TG  L VDGG +
Sbjct: 220 -LTGAAAFLASDDASFITGQTLAVDGGMV 247

>pdb|3PK0|A Chain A, Crystal Structure Of Short-Chain DehydrogenaseREDUCTASE SDR FROM Mycobacterium Smegmatis Length = 262

Iteration: 1
 Score = 95.1 bits (235), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/260 (28%), Positives = 125/260 (48%), Gaps = 29/260 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT--SIGVGKCHYVHC 70
           L+G+  ++TGG  GIG   A +FA  GA + V      ++   VA    +G GK   V  
Sbjct: 8   LQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQT 67
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++  Q  AL    V+ +G +D++ +NAG+    D  +  +     + +FA+NV G   
Sbjct: 68  DVSDRAQCDALAGRAVEEFGGIDVVCANAGVFP--DAPLATMTPEQLNGIFAVNVNGTFY 125
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            V+     ++  G  G +V T+S+ G   G    + Y  +K A +G +R+A+++L  H I
Sbjct: 126 AVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKI 184
Query: 190 RVNCVSPHGLATP---------LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
            VN + P  + T          +   A  +PA  +       TP +      GH+A    
Sbjct: 185 TVNAIMPGNIMTEGLLENGEEYIASMARSIPAGAL------GTPED-----IGHLA---A 230
Query: 241 FLACRDSEFVTGHDLVVDGG 260
           FLA +++ ++TG  + VDGG
Sbjct: 231 FLATKEAGYITGQAIAVDGG 250

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/259 (29%), Positives = 121/259 (46%), Gaps = 18/259 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           + E KV I+TG   GIG+  A   A  GA  +V+ADI  E    VA  I    G    V 
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVA 64
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSD-QTVLDLDFSAFDRLFAINVRGM 128
            DV++    KA+ D T+  +G +D + +NA I        +L +D   + +  ++N+ G 
Sbjct: 65  VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             C +   + M + G  G+IV  +S A          Y ++K  + GL +  S +LG   
Sbjct: 125 LWCTRAVYKKMTKRG-GGAIVNQSSTAAWL---YSNYYGLAKVGINGLTQQLSRELGGRN 180
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV---LFLACR 245
           IR+N ++P  + T    +    P + V+ + +   PL     R G   D V   LFL   
Sbjct: 181 IRINAIAPGPIDT--EANRTTTPKEMVDDIVK-GLPLS----RMGTPDDLVGMCLFLLSD 233
Query: 246 DSEFVTGHDLVVDGGFLIR 264
           ++ ++TG    VDGG +IR
Sbjct: 234 EASWITGQIFNVDGGQIIR 252

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 95.1 bits (235), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 18/261 (6%)
Query: 6   MCNAKN-KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-- 62
           M N+ N +L+GK AIITG  +GIG+  A  FA  GA  +V++DI  +    V   I    
Sbjct: 1   MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLG 59
Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
           G+     CD+T+E ++ AL D  +   G++DI+ +NAG          D+  + F R + 
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAG---GGGPKPFDMPMADFRRAYE 116
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           +NV       +  A  M + G  G I+   S+A        T Y  SK A   LVR+ + 
Sbjct: 117 LNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAV 239
            LG   IRVN ++P  +   LT     +   E+E+     TP+     R G    +A+A 
Sbjct: 176 DLGEKNIRVNGIAPGAI---LTDALKSVITPEIEQKMLQHTPIR----RLGQPQDIANAA 228
Query: 240 LFLACRDSEFVTGHDLVVDGG 260
           LFL    + +V+G  L V GG
Sbjct: 229 LFLCSPAASWVSGQILTVSGG 249

>pdb|1E3S|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh Length = 261

Iteration: 1
 Score = 94.4 bits (233), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 128/266 (48%), Gaps = 23/266 (8%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
           M  A   ++G VA+ITGGASG+G +TA+     GA  +++ D+ +  G   A  +G G C
Sbjct: 1   MAAAVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLL-DVPNSEGETEAKKLG-GNC 58
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI------LSSSDQTVLDLDFSAFDR 119
            +   +VT+E +V+A +    + +G++D+  + AGI             V  L+   F R
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLE--DFQR 116
Query: 120 LFAINVRGMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
           +  +N+ G    ++  A VM +     GG RG I+ TASVA   G   +  Y  SK  ++
Sbjct: 117 VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV 176
Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH 234
           G+    +  L   GIRV  ++P   ATPL      +P D+V      Q P      R G 
Sbjct: 177 GMTLPIARDLAPIGIRVVTIAPGLFATPLLTT---LP-DKVRNFLASQVPFPS---RLGD 229
Query: 235 VAD-AVLFLACRDSEFVTGHDLVVDG 259
            A+ A L     ++ F+ G  + +DG
Sbjct: 230 PAEYAHLVQMVIENPFLNGEVIRLDG 255

>pdb|3OSU|A Chain A, Crystal Structure Of The 3-Oxoacyl-Acyl Carrier Protein Reductase, Fabg, From Staphylococcus Aureus Length = 246

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 18/251 (7%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDV 72
           K A++TG + GIG + A   A+ G  + V      E    V   I   GV     +  +V
Sbjct: 5   KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANV 63
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +  +VKA +   V  +G LD++ +NAGI  + D  +       +D +   N++G+  C+
Sbjct: 64  ADADEVKAXIKEVVSQFGSLDVLVNNAGI--TRDNLLXRXKEQEWDDVIDTNLKGVFNCI 121
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A    +     G+I+  +SV G+ G   + +Y  +K  VIGL +SA+ +L   GI VN
Sbjct: 122 QKATPQXLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN 180
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSEF 249
            V+P  + +  T       +DE+++    Q PL     R G    +A+ V FLA   +++
Sbjct: 181 AVAPGFIVSDXT----DALSDELKEQXLTQIPL----ARFGQDTDIANTVAFLASDKAKY 232
Query: 250 VTGHDLVVDGG 260
           +TG  + V+GG
Sbjct: 233 ITGQTIHVNGG 243

>pdb|4B79|A Chain A, The Aeropath Project And Pseudomonas Aeruginosa High-throughput Crystallographic Studies For Assessment Of Potential Targets In Early Stage Drug Discovery. Length = 242

Iteration: 1
 Score = 94.0 bits (232), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 123/249 (49%), Gaps = 20/249 (8%)
Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
           G+  ++TGG+SGIG   A  FA+ GA ++ +    D +       I          D+T+
Sbjct: 11  GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHPRI-----RREELDITD 65
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ L ++      +LD++ +NAGI  S D+   + D + F+R+  +N+       + 
Sbjct: 66  SQRLQRLFEA----LPRLDVLVNNAGI--SRDRE--EYDLATFERVLRLNLSAAMLASQL 117
Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
           A  ++ + G  GSI+  AS+  + G   R  Y  SK A++ L RS + +     IRVN +
Sbjct: 118 ARPLLAQRG--GSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAI 175
Query: 195 SPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH 253
           +P  + TPL     G+ AD E  +    +TPL      A  VA A  FL    + FVTG 
Sbjct: 176 APGWIDTPLGA---GLKADVEATRRIMQRTPL-ARWGEAPEVASAAAFLCGPGASFVTGA 231
Query: 254 DLVVDGGFL 262
            L VDGG+L
Sbjct: 232 VLAVDGGYL 240

>pdb|1E3W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And 3-Keto Butyrate Length = 261

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 127/266 (47%), Gaps = 23/266 (8%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
           M  A   ++G VA+ITGGASG+G +TA+     GA  +++ D+ +  G   A  +G G C
Sbjct: 1   MAAAVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLL-DVPNSEGETEAKKLG-GNC 58
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI------LSSSDQTVLDLDFSAFDR 119
            +   +VT+E +V+A +    + +G++D+  + AGI             V  L+   F R
Sbjct: 59  IFAPANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLE--DFQR 116
Query: 120 LFAINVRGMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
           +  +N+ G    ++  A VM +     GG RG I+ TASVA   G   +  Y  SK  ++
Sbjct: 117 VINVNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIV 176
Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH 234
           G+    +  L   GIRV  ++P   ATPL      +P D V      Q P      R G 
Sbjct: 177 GMTLPIARDLAPIGIRVVTIAPGLFATPLLTT---LP-DTVRNFLASQVPFPS---RLGD 229
Query: 235 VAD-AVLFLACRDSEFVTGHDLVVDG 259
            A+ A L     ++ F+ G  + +DG
Sbjct: 230 PAEYAHLVQMVIENPFLNGEVIRLDG 255

>pdb|3NUG|A Chain A, Crystal Structure Of Wild Type Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 93.6 bits (231), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 118/251 (47%), Gaps = 8/251 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GK A++TG A GIG+  A   A  GA +IV +DI  E  +  A SIG  K   +  D
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIV-SDINAEGAKAAAASIG-KKARAIAAD 60
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++   VKAL        G +DI+ +NA I+       +DLD   + ++  +N+ G    
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH--WRKIIDVNLTGTFIV 118
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +     M   G  G ++  AS     G      Y  +K  VIG  R+ + +LG + I  
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P GL       A   P +E     E    ++G   +  H+AD V FLA  D+ ++T
Sbjct: 179 NAVTP-GLIESDGVKAS--PHNEAFGFVEMLQAMKGKG-QPEHIADVVSFLASDDARWIT 234
Query: 252 GHDLVVDGGFL 262
           G  L VD G +
Sbjct: 235 GQTLNVDAGMV 245

>pdb|1I01|A Chain A, Crystal Structure Of Beta-Ketoacyl [acyl Carrier Protein] Reductase From E. Coli. Length = 244

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 123/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             EGK+A++TG + GIG   A   A  GA+  VI     E G Q  +         +  +
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDYLGANGKGLMLN 59
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   ++++++     +G++DI+ +NAGI  + D  ++ +    ++ +   N+  +   
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGI--TRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++    G I+   SV G+ G   + +Y  +K  +IG  +S + ++   GI V
Sbjct: 118 SKAVMRAMMKK-RHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITV 176
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T       +D+       Q P  G +  A  +A+AV FLA  ++ ++T
Sbjct: 177 NVVAPGFIETDMTRAL----SDDQRAGILAQVP-AGRLGGAQEIANAVAFLASDEAAYIT 231
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 232 GETLHVNGGMYM 243

>pdb|2WDZ|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase Galactitol-Dehydrogenase (Gatdh) Of Rhodobacter Sphaeroides In Complex With Nad+ And 1,2-Pentandiol Length = 254

Iteration: 1
 Score = 93.2 bits (230), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 124/254 (48%), Gaps = 10/254 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+G  A +TG  SGIG    R FA  GAR+I+I      L R  A  +G      +  D
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDR-AAQELGAAVAARIVAD 66
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   + A           + I+ ++AGI    D   L+ D + + ++ A+NV GM   
Sbjct: 67  VTDAEAMTAAAAEAEAVA-PVSILVNSAGIARLHD--ALETDDATWRQVMAVNVDGMFWA 123
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--TDYHMSKHAVIGLVRSASVQLGVHGI 189
            +   R MV  G  G+IV   S++G+   + +  + Y  SK AV  L R+ + +    G+
Sbjct: 124 SRAFGRAMVARGA-GAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RVN ++P  +AT +T      P  E+ + +   TP+ G       +A A LFLA   + +
Sbjct: 183 RVNALAPGYVATEMTLKMRERP--ELFETWLDMTPM-GRCGEPSEIAAAALFLASPAASY 239
Query: 250 VTGHDLVVDGGFLI 263
           VTG  L VDGG+ +
Sbjct: 240 VTGAILAVDGGYTV 253

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 129/255 (50%), Gaps = 21/255 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHC 70
           L   VAI+TG A+GIG   A  FA  GA  +V+ D++ E    VA +I    GK   + C
Sbjct: 10  LNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLKSEGAEAVAAAIRQAGGKAIGLEC 68
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +VT+E   +A++ + +  +G++ ++ +NAG          D+  S F+  F +N+  +  
Sbjct: 69  NVTDEQHREAVIKAALDQFGKITVLVNNAG---GGGPKPFDMPMSDFEWAFKLNLFSLFR 125
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + AA  M + G  G+I+  +S+AG     R   Y  SK AV  L R+ +  +G  GIR
Sbjct: 126 LSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIR 184
Query: 191 VNCVSP-----HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           VN ++P       LAT LT         E+E+     TPL G +  A  +A+A LFL   
Sbjct: 185 VNAIAPGAIKTDALATVLT--------PEIERAMLKHTPL-GRLGEAQDIANAALFLCSP 235
Query: 246 DSEFVTGHDLVVDGG 260
            + +++G  L V GG
Sbjct: 236 AAAWISGQVLTVSGG 250

>pdb|1EDO|A Chain A, The X-Ray Structure Of Beta-Keto Acyl Carrier Protein Reductase From Brassica Napus Complexed With Nadp+ Length = 244

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 129/252 (51%), Gaps = 15/252 (5%)
Query: 17  VAIITGGASGIGETTARLFADHGARMIV----IADIQDELGRQVATSIGVGKCHYVHCDV 72
           V ++TG + GIG+  A      G +++V     A   +E+ +Q+  + G G+      DV
Sbjct: 3   VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQI-EAYG-GQAITFGGDV 60
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           + E  V+A++ + +  +G +D++ +NAGI  + D  ++ +  S +D +  +N+ G+  C 
Sbjct: 61  SKEADVEAMMKTAIDAWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCT 118
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A ++M++   +G I+  ASV G  G   + +Y  +K  VIG  ++A+ +     I VN
Sbjct: 119 QAATKIMMKK-RKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN 177
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD-SEFVT 251
            V P  +A+ +T        +++EK      PL G   +  +VA  V FLA    + ++T
Sbjct: 178 VVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYIT 232
Query: 252 GHDLVVDGGFLI 263
           G    +DGG  I
Sbjct: 233 GQAFTIDGGIAI 244

>pdb|1E6W|A Chain A, Rat Brain 3-Hydroxyacyl-Coa Dehydrogenase Binary Complex With Nadh And Estradiol Length = 260

Iteration: 1
 Score = 92.8 bits (229), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/263 (30%), Positives = 127/263 (48%), Gaps = 23/263 (8%)
Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV 68
           A   ++G VA+ITGGASG+G +TA+     GA  +++ D+ +  G   A  +G G C + 
Sbjct: 3   AVRSVKGLVAVITGGASGLGLSTAKRLVGQGATAVLL-DVPNSEGETEAKKLG-GNCIFA 60
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI------LSSSDQTVLDLDFSAFDRLFA 122
             +VT+E +V+A +    + +G++D+  + AGI             V  L+   F R+  
Sbjct: 61  PANVTSEKEVQAALTLAKEKFGRIDVAVNCAGIAVAIKTYHEKKNQVHTLE--DFQRVIN 118
Query: 123 INVRGMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
           +N+ G    ++  A VM +     GG RG I+ TASVA   G   +  Y  SK  ++G+ 
Sbjct: 119 VNLIGTFNVIRLVAGVMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMT 178
Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
              +  L   GIRV  ++P   ATPL      +P D+V      Q P      R G  A+
Sbjct: 179 LPIARDLAPIGIRVVTIAPGLFATPLLTT---LP-DKVRNFLASQVPFPS---RLGDPAE 231
Query: 238 -AVLFLACRDSEFVTGHDLVVDG 259
            A L     ++ F+ G  + +DG
Sbjct: 232 YAHLVQMVIENPFLNGEVIRLDG 254

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 92.0 bits (227), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 127/261 (48%), Gaps = 16/261 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIGVG--KCHY 67
           +  GK  IITG ++GIG + A +FA  GA++ +    +D L   +Q     GV   K + 
Sbjct: 23  RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINA 82
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           V  DVT       ++++T+  +G++DI+ +NAG   +      D     + + F +N + 
Sbjct: 83  VVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQA 142
Query: 128 MAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           +    +     +++   +G IV  +S VAG         Y  +K A+    R  ++ L  
Sbjct: 143 VIEMTQKTKEHLIK--TKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 200
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF------EPQTPLEGVVLRAGHVADAVL 240
           HG+RVN VSP  +AT     A G+P    +KL+      +   P+ G   +   +A+ ++
Sbjct: 201 HGVRVNSVSPGAVATGF-MGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIV 258
Query: 241 FLACRD-SEFVTGHDLVVDGG 260
           FLA R+ S ++ G  +V DGG
Sbjct: 259 FLADRNLSSYIIGQSIVADGG 279

>pdb|1Q7C|A Chain A, The Structure Of Betaketoacyl-[acp] Reductase Y151f Mutant In Complex With Nadph Fragment Length = 244

Iteration: 1
 Score = 91.7 bits (226), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 123/252 (48%), Gaps = 10/252 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             EGK+A++TG + GIG   A   A  GA+  VI     E G Q  +         +  +
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDYLGANGKGLMLN 59
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   ++++++     +G++DI+ +NAGI  + D  ++ +    ++ +   N+  +   
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGI--TRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++    G I+   SV G+ G   + ++  +K  +IG  +S + ++   GI V
Sbjct: 118 SKAVMRAMMKK-RHGRIITIGSVVGTMGNGGQANFAAAKAGLIGFSKSLAREVASRGITV 176
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +T       +D+       Q P  G +  A  +A+AV FLA  ++ ++T
Sbjct: 177 NVVAPGFIETDMTRAL----SDDQRAGILAQVP-AGRLGGAQEIANAVAFLASDEAAYIT 231
Query: 252 GHDLVVDGGFLI 263
           G  L V+GG  +
Sbjct: 232 GETLHVNGGMYM 243

>pdb|3CXR|A Chain A, Crystal Structure Of Gluconate 5-Dehydrogase From Streptococcus Suis Type 2 Length = 291

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 76/256 (29%), Positives = 120/256 (46%), Gaps = 11/256 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           L+GK+A++TG + GIG   A  +A  GA  IV  DI  EL   G     + G+    YV 
Sbjct: 32  LKGKIALVTGASYGIGFAIASAYAKAGAT-IVFNDINQELVDRGMAAYKAAGINAHGYV- 89
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT+E  ++A+V       G +DI+ +NAGI+      ++++  + F ++  I++    
Sbjct: 90  CDVTDEDGIQAMVAQIESEVGIIDILVNNAGIIRRV--PMIEMTAAQFRQVIDIDLNAPF 147
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              K     M++ G  G I+   S+    G +  + Y  +K  +  L ++ + + G   I
Sbjct: 148 IVSKAVIPSMIKKG-HGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANI 206
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACRD 246
           + N + P  +ATP T     +  D     F+     +    R G   D     +FLA   
Sbjct: 207 QCNGIGPGYIATPQTAPLRELQKDGSRHPFDQFIIAKTPAARWGEAEDLMGPAVFLASDA 266
Query: 247 SEFVTGHDLVVDGGFL 262
           S FV GH L VDGG L
Sbjct: 267 SNFVNGHILYVDGGIL 282

>pdb|3IS3|A Chain A, Crystal Structure Of 17beta-Hydroxysteroid Dehydrogenase (Apo Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 91.7 bits (226), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 3   DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV 62
           ++S      +L+GKVA++TG   GIG   A      GA+++V      +   +V + I  
Sbjct: 6   NASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA 65
Query: 63  --GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
                  +  D+    ++  L D  V ++G LDI  SN+G++S     + D+    FDR+
Sbjct: 66  LGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH--LKDVTEEEFDRV 123
Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRS 179
           F++N RG     + A R + EG   G IV T+S  +      + + Y  SK AV   VR 
Sbjct: 124 FSLNTRGQFFVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRI 180
Query: 180 ASVQLGVHGIRVNCVSPHGLATPL---TCHAY-----GMPADEVEKLFEPQTPLEGVVLR 231
            S   G   I VN V+P G  T +     H Y        A++ +++    +PL     R
Sbjct: 181 FSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH----R 236
Query: 232 AGH---VADAVLFLACRDSEFVTGHDLVVDGG 260
            G    VA+ V FL  ++ E+V G  L +DGG
Sbjct: 237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 10/230 (4%)
Query: 33  RLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL 92
           R F + GAR +VI D  +  GR +   +      ++ CDVT E  VK LV  T++ +G+L
Sbjct: 27  RAFVNSGAR-VVICDKDESGGRALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFGRL 83
Query: 93  DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA 152
           D + +NAG      Q   +     F +L  +N+ G     K A   + +   +G+++  +
Sbjct: 84  DCVVNNAG-HHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINIS 140
Query: 153 SVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA 212
           S+ G+ G  +   Y  +K AV  + ++ ++    +G+RVNC+SP  + TPL      +  
Sbjct: 141 SLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMP 200
Query: 213 DEVEKLFEPQ--TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
           D    + E     PL G + +   V  A +FLA  ++ F TG +L+V GG
Sbjct: 201 DPRASIREGMLAQPL-GRMGQPAEVGAAAVFLAS-EANFCTGIELLVTGG 248

>pdb|3OP4|A Chain A, Crystal Structure Of Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Vibrio Cholerae O1 Biovar Eltor Str. N16961 In Complex With Nadp+ Length = 248

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 116/248 (46%), Gaps = 10/248 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           LEGKVA++TG + GIG+  A L A+ GA+  VI     E G Q  +            +V
Sbjct: 7   LEGKVALVTGASRGIGKAIAELLAERGAK--VIGTATSESGAQAISDYLGDNGKGXALNV 64
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           TN   ++A++ +    +G +DI+ +NAGI  + D  +       +  +   N+  +    
Sbjct: 65  TNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLXRXKEEEWSDIXETNLTSIFRLS 122
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K   R   +   +G I+   SV G+ G   + +Y  +K  VIG  +S + ++   G+ VN
Sbjct: 123 KAVLRGXXK-KRQGRIINVGSVVGTXGNAGQANYAAAKAGVIGFTKSXAREVASRGVTVN 181
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+P  + T  T        DE       Q P  G +     +A AV FLA  ++ ++TG
Sbjct: 182 TVAPGFIETDXTKALN----DEQRTATLAQVPA-GRLGDPREIASAVAFLASPEAAYITG 236
Query: 253 HDLVVDGG 260
             L V+GG
Sbjct: 237 ETLHVNGG 244

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 90.1 bits (222), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 122/255 (47%), Gaps = 12/255 (4%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYV 68
           +  LE KVA++T    GIG   AR  A  GA ++V +  Q+ + R VAT  G G      
Sbjct: 9   RKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT 68
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            C V      + LV   V  +G +DI+ SNA + +     ++D     +D++  +NV+  
Sbjct: 69  VCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWDKILHVNVKAT 127
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               K     M + G  GS++  +SV           Y++SK A++GL ++ +V+L    
Sbjct: 128 VLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRN 186
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACR 245
           IRVNC++P  + T  +   +    D+  K +  ++     + R G+  D    V FL   
Sbjct: 187 IRVNCLAPGLIKTNFSQVLW---MDKARKEYMKESLR---IRRLGNPEDCAGIVSFLCSE 240
Query: 246 DSEFVTGHDLVVDGG 260
           D+ ++TG  +VV GG
Sbjct: 241 DASYITGETVVVGGG 255

>pdb|3ITD|A Chain A, Crystal Structure Of An Inactive 17beta-Hydroxysteroid Dehydrogenase (Y167f Mutated Form) From Fungus Cochliobolus Lunatus Length = 270

Iteration: 1
 Score = 89.7 bits (221), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 126/272 (46%), Gaps = 23/272 (8%)
Query: 3   DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV 62
           ++S      +L+GKVA++TG   GIG   A      GA+++V      +   +V + I  
Sbjct: 6   NASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKA 65
Query: 63  --GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
                  +  D+    ++  L D  V ++G LDI  SN+G++S     + D+    FDR+
Sbjct: 66  LGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSFGH--LKDVTEEEFDRV 123
Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRS 179
           F++N RG     + A R + EG   G IV T+S  +      + + +  SK AV   VR 
Sbjct: 124 FSLNTRGQFFVAREAYRHLTEG---GRIVLTSSNTSKDFSVPKHSLFSGSKGAVDSFVRI 180
Query: 180 ASVQLGVHGIRVNCVSPHGLATPL---TCHAY-----GMPADEVEKLFEPQTPLEGVVLR 231
            S   G   I VN V+P G  T +     H Y        A++ +++    +PL     R
Sbjct: 181 FSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLH----R 236
Query: 232 AGH---VADAVLFLACRDSEFVTGHDLVVDGG 260
            G    VA+ V FL  ++ E+V G  L +DGG
Sbjct: 237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGG 268

>pdb|3NDR|A Chain A, Crystal Structure Of Tetrameric Pyridoxal 4-Dehydrogenase From Mesorhizobium Loti Length = 247

Iteration: 1
 Score = 89.7 bits (221), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 115/249 (46%), Gaps = 8/249 (3%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GK A++TG A GIG+  A   A  GA +IV +DI  E  +  A SIG  K   +  D
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGATVIV-SDINAEGAKAAAASIG-KKARAIAAD 60
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++   VKAL        G +DI+ +NA I+       +DLD   + ++  +N+ G    
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDH--WRKIIDVNLTGTFIV 118
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +         G  G ++  AS     G      Y  +K  VIG  R+ + +LG + I  
Sbjct: 119 TRAGTDQXRAAGKAGRVISIASNTFFAGTPNXAAYVAAKGGVIGFTRALATELGKYNITA 178
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P GL       A   P +E     E     +G   +  H+AD V FLA  D+ ++T
Sbjct: 179 NAVTP-GLIESDGVKA--SPHNEAFGFVEXLQAXKGKG-QPEHIADVVSFLASDDARWIT 234
Query: 252 GHDLVVDGG 260
           G  L VD G
Sbjct: 235 GQTLNVDAG 243

>pdb|1WMB|A Chain A, Crystal Structure Of Nad Dependent D-3-Hydroxybutylate Dehydrogenase Length = 260

Iteration: 1
 Score = 89.0 bits (219), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 128/272 (47%), Gaps = 33/272 (12%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV-----IADIQDELGRQVATSIGVGKCHY 67
           L+GKVA++TG  SGIG   A   A  GA +++      A+I +++   +A   GV K  Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGV-KVLY 59
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINV 125
              D++    V+ LVD+ V+  G++DI+ +NAGI      T L  DF    +D + A+N+
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI----QHTALIEDFPTEKWDAILALNL 115
Query: 126 R----GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
                G AA + H    M + G  G I+  AS  G      ++ Y  +KH V+G  +  +
Sbjct: 116 SAVFHGTAAALPH----MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTA 170
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE---------VEKLFEPQTPLEGVVLRA 232
           ++    GI  N + P  + TPL        A++          E L E Q  L+ V    
Sbjct: 171 LETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE- 229
Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
             +    +FLA   +  +TG  + VDGG+  R
Sbjct: 230 -QLGGTAVFLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3GK3|A Chain A, Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 269

Iteration: 1
 Score = 88.6 bits (218), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 119/251 (47%), Gaps = 15/251 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHYVHC- 70
           +VA +TGG  G+G   +R   D G   + +A    E    V+T +      G+    +  
Sbjct: 26  RVAFVTGGMGGLGAAISRRLHDAG---MAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +    +   +  + ++G++D++ +NAGI  + D T + +    +D +   ++  M  
Sbjct: 83  DVADFESCERCAEKVLADFGKVDVLINNAGI--TRDATFMKMTKGDWDAVMRTDLDAMFN 140
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K     MVE    G IV   SV GS G   + +Y  +K  + G  ++ +++    GI 
Sbjct: 141 VTKQFIAGMVERRF-GRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGIT 199
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN VSP  LAT +      +P D +E    PQ P+ G + R   VA  + FL   D+ FV
Sbjct: 200 VNTVSPGYLATAMV---EAVPQDVLEAKILPQIPV-GRLGRPDEVAALIAFLCSDDAGFV 255
Query: 251 TGHDLVVDGGF 261
           TG DL ++GG 
Sbjct: 256 TGADLAINGGM 266

>pdb|3O38|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 13  LEGKVAIITGGA-SGIGETTARLFADHGARMIVIADIQDE-LG--RQVATSIGVGKCHYV 68
           L+GKV ++T  A +GIG TTAR     GA  +VI+D  +  LG  R     +G+G+   V
Sbjct: 20  LKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYHERRLGETRDQLADLGLGRVEAV 78
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDVT+   V AL+  TV+  G+LD++ +NAG+       V+D+    +DR+  + +  +
Sbjct: 79  VCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL--GGQTPVVDMTDEEWDRVLNVTLTSV 136
Query: 129 AACVKHAARVM--VEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
               + A R    V+ G  G IV  ASV G      ++ Y  +K  V+ L R ++++   
Sbjct: 137 MRATRAALRYFRGVDHG--GVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVE 194
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE--GVVLRAGHVADAVLFLAC 244
            G+R+N VSP      +  H + +      +L +     E  G       VA  + FLA 
Sbjct: 195 FGVRINAVSP-----SIARHKF-LEKTSSSELLDRLASDEAFGRAAEPWEVAATIAFLAS 248
Query: 245 RDSEFVTGH 253
             S ++TG 
Sbjct: 249 DYSSYMTGE 257

>pdb|3GDF|A Chain A, Crystal Structure Of The Nadp-Dependent Mannitol Dehydrogenase From Cladosporium Herbarum. Length = 267

Iteration: 1
 Score = 88.2 bits (217), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 128/260 (49%), Gaps = 18/260 (6%)
Query: 13  LEGKVAIITG--GASGIGETTARLFADHGARMIVI----ADIQDELGRQVATSIGVGKCH 66
           L+GKV ++TG  G  G+G   AR  A+ GA + +     A   +E  +++  + G+ K  
Sbjct: 18  LKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KAK 76
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
              C V +    + LV   V ++GQ+D   +NAG  +++D  +LD    A++ +  +++ 
Sbjct: 77  AYKCQVDSYESCEKLVKDVVADFGQIDAFIANAG--ATADSGILDGSVEAWNHVVQVDLN 134
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTDYHMSKHAVIGLVRSASVQL 184
           G   C K       E G  GS+V TAS++G      + +T Y+++K   I + RS + + 
Sbjct: 135 GTFHCAKAVGHHFKERGT-GSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEW 193
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
                RVN +SP  + T L+         E ++L+    P+ G    A  +  A ++ A 
Sbjct: 194 RDFA-RVNSISPGYIDTGLS----DFVPKETQQLWHSMIPM-GRDGLAKELKGAYVYFAS 247
Query: 245 RDSEFVTGHDLVVDGGFLIR 264
             S + TG DL++DGG+  R
Sbjct: 248 DASTYTTGADLLIDGGYTTR 267

>pdb|3LLS|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Tuberculosis Length = 475

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 139/270 (51%), Gaps = 23/270 (8%)
Query: 2   ADSSMCNA--KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS 59
           AD S   A  +  L+GKVAI+TG A GIG T A +FA  GA ++ I D++        T+
Sbjct: 219 ADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI-DVESAAENLAETA 277
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             VG    +  DVT +  V  + +    ++G + DI+ +NAGI  + D+ + ++D + +D
Sbjct: 278 SKVGGTA-LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI--TRDKLLANMDDARWD 334
Query: 119 RLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            + A+N   + A ++    ++  G  G  G ++  +S+AG  G + +T+Y  +K  +IG+
Sbjct: 335 AVLAVN---LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 391
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH-- 234
            ++ +  L   GI +N V+P  + T +T  A  +   EV +           +L+ G   
Sbjct: 392 TQALAPGLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLN-------SLLQGGQPV 443
Query: 235 -VADAVLFLACRDSEFVTGHDLVVDGGFLI 263
            VA+A+ + A   S  VTG+ + V G  +I
Sbjct: 444 DVAEAIAYFASPASNAVTGNVIRVCGQAMI 473

>pdb|2ZTM|A Chain A, T190s Mutant Of D-3-Hydroxybutyrate Dehydrogenase Length = 260

Iteration: 1
 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 128/272 (47%), Gaps = 33/272 (12%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV-----IADIQDELGRQVATSIGVGKCHY 67
           L+GKVA++TG  SGIG   A   A  GA +++      A+I +++   +A   GV K  Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGV-KVLY 59
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINV 125
              D++    V+ LVD+ V+  G++DI+ +NAGI      T L  DF    +D + A+N+
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI----QHTALIEDFPTEKWDAILALNL 115
Query: 126 R----GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
                G AA + H    M + G  G I+  AS  G      ++ Y  +KH V+G  +  +
Sbjct: 116 SAVFHGTAAALPH----MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTA 170
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE---------VEKLFEPQTPLEGVVLRA 232
           ++    GI  N + P  + +PL        A++          E L E Q  L+ V    
Sbjct: 171 LETAGQGITANAICPGWVRSPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE- 229
Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
             +    +FLA   +  +TG  + VDGG+  R
Sbjct: 230 -QLGGTAVFLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3V1T|C Chain C, Crystal Structure Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 1.9 Angstrom Resolution Length = 462

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 140/271 (51%), Gaps = 25/271 (9%)
Query: 2   ADSSMCNA--KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS 59
           AD S   A  +  L+GKVAI+TG A GIG T A +FA  GA ++ I D++        T+
Sbjct: 206 ADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI-DVESAAENLAETA 264
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             VG    +  DVT +  V  + +    ++G + DI+ +NAGI  + D+ + ++D + +D
Sbjct: 265 SKVGGTA-LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI--TRDKLLANMDDARWD 321
Query: 119 RLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            + A+N   + A ++    ++  G  G  G ++  +S+AG  G + +T+Y  +K  +IG+
Sbjct: 322 AVLAVN---LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 378
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK----LFEPQTPLEGVVLRA 232
            ++ +  L   GI +N V+P  + T +T  A  +   EV +    L +   P++      
Sbjct: 379 TQALAPGLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGGQPVD------ 431
Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
             VA+A+ + A   S  VTG+ + V G  +I
Sbjct: 432 --VAEAIAYFASPASNAVTGNVIRVCGQAMI 460

>pdb|3M1L|A Chain A, Crystal Strucutre Of A C-Terminal Trunacted Mutant Of A Putative Ketoacyl Reductase (Fabg4) From Mycobacterium Tuberculosis H37rv At 2.5 Angstrom Resolution Length = 432

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 135/261 (51%), Gaps = 25/261 (9%)
Query: 2   ADSSMCNA--KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS 59
           AD S   A  +  L+GKVAI+TG A GIG T A +FA  GA ++ I D++        T+
Sbjct: 182 ADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI-DVESAAENLAETA 240
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             VG    +  DVT +  V  + +    ++G + DI+ +NAGI  + D+ + ++D + +D
Sbjct: 241 SKVGGTA-LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI--TRDKLLANMDDARWD 297
Query: 119 RLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            + A+N   + A ++    ++  G  G  G ++  +S+AG  G + +T+Y  +K  +IG+
Sbjct: 298 AVLAVN---LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 354
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK----LFEPQTPLEGVVLRA 232
            ++ +  L   GI +N V+P  + T +T  A  +   EV +    L +   P++      
Sbjct: 355 TQALAPGLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGGQPVD------ 407
Query: 233 GHVADAVLFLACRDSEFVTGH 253
             VA+A+ + A   S  VTG+
Sbjct: 408 --VAEAIAYFASPASNAVTGN 426

>pdb|3Q6I|A Chain A, Crystal Structure Of Fabg4 And Coenzyme Binary Complex Length = 446

Iteration: 1
 Score = 87.8 bits (216), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 140/271 (51%), Gaps = 25/271 (9%)
Query: 2   ADSSMCNA--KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS 59
           AD S   A  +  L+GKVAI+TG A GIG T A +FA  GA ++ I D++        T+
Sbjct: 190 ADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI-DVESAAENLAETA 248
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             VG    +  DVT +  V  + +    ++G + DI+ +NAGI  + D+ + ++D + +D
Sbjct: 249 SKVGGTA-LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI--TRDKLLANMDDARWD 305
Query: 119 RLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            + A+N   + A ++    ++  G  G  G ++  +S+AG  G + +T+Y  +K  +IG+
Sbjct: 306 AVLAVN---LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 362
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK----LFEPQTPLEGVVLRA 232
            ++ +  L   GI +N V+P  + T +T  A  +   EV +    L +   P++      
Sbjct: 363 TQALAPGLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGGQPVD------ 415
Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
             VA+A+ + A   S  VTG+ + V G  +I
Sbjct: 416 --VAEAIAYFASPASNAVTGNVIRVCGQAMI 444

>pdb|4FW8|A Chain A, Crystal Structure Of Fabg4 Complexed With Coenzyme Nadh Length = 454

Iteration: 1
 Score = 87.4 bits (215), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 140/271 (51%), Gaps = 25/271 (9%)
Query: 2   ADSSMCNA--KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS 59
           AD S   A  +  L+GKVAI+TG A GIG T A +FA  GA ++ I D++        T+
Sbjct: 198 ADDSTPPADWEKPLDGKVAIVTGAARGIGATIAEVFARDGAHVVAI-DVESAAENLAETA 256
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFD 118
             VG    +  DVT +  V  + +    ++G + DI+ +NAGI  + D+ + ++D + +D
Sbjct: 257 SKVGGTA-LWLDVTADDAVDKISEHLRDHHGGKADILVNNAGI--TRDKLLANMDDARWD 313
Query: 119 RLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            + A+N   + A ++    ++  G  G  G ++  +S+AG  G + +T+Y  +K  +IG+
Sbjct: 314 AVLAVN---LLAPLRLTEGLVGNGSIGEGGRVIGLSSIAGIAGNRGQTNYATTKAGMIGI 370
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK----LFEPQTPLEGVVLRA 232
            ++ +  L   GI +N V+P  + T +T  A  +   EV +    L +   P++      
Sbjct: 371 TQALAPGLAAKGITINAVAPGFIETQMTA-AIPLATREVGRRLNSLLQGGQPVD------ 423
Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
             VA+A+ + A   S  VTG+ + V G  +I
Sbjct: 424 --VAEAIAYFASPASNAVTGNVIRVCGQAMI 452

>pdb|2AG5|A Chain A, Crystal Structure Of Human Dhrs6 Length = 246

Iteration: 1
 Score = 87.4 bits (215), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 81/254 (31%), Positives = 123/254 (48%), Gaps = 17/254 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GKV I+T  A GIG+  A  FA  GA++I   DI +   +++    G+        D
Sbjct: 3   RLDGKVIILTAAAQGIGQAAALAFAREGAKVIA-TDINESKLQELEKYPGI---QTRVLD 58
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT + Q    +D       +LD++F+ AG +     TVLD +   +D    +NVR M   
Sbjct: 59  VTKKKQ----IDQFANEVERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLM 112
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           +K     M+     G+I+  +SVA S  G   R  Y  +K AVIGL +S +      GIR
Sbjct: 113 IKAFLPKML-AQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIR 171
Query: 191 VNCVSPHGLATP---LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            NCV P  + TP       A G P +      + Q    G    A  +A   ++LA  +S
Sbjct: 172 CNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT--GRFATAEEIAMLCVYLASDES 229
Query: 248 EFVTGHDLVVDGGF 261
            +VTG+ +++DGG+
Sbjct: 230 AYVTGNPVIIDGGW 243

>pdb|2ZTU|A Chain A, T190a Mutant Of D-3-Hydroxybutyrate Dehydrogenase Complexed With Nad+ Length = 260

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 127/272 (46%), Gaps = 33/272 (12%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV-----IADIQDELGRQVATSIGVGKCHY 67
           L+GKVA++TG  SGIG   A   A  GA +++      A+I +++   +A   GV K  Y
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEI-EKVRAGLAAQHGV-KVLY 59
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA--FDRLFAINV 125
              D++    V+ LVD+ V+  G++DI+ +NAGI      T L  DF    +D + A+N+
Sbjct: 60  DGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI----QHTALIEDFPTEKWDAILALNL 115
Query: 126 R----GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
                G AA + H    M + G  G I+  AS  G      ++ Y  +KH V+G  +  +
Sbjct: 116 SAVFHGTAAALPH----MKKQGF-GRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTA 170
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE---------VEKLFEPQTPLEGVVLRA 232
           ++    GI  N + P  +  PL        A++          E L E Q  L+ V    
Sbjct: 171 LETAGQGITANAICPGWVRAPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPE- 229
Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
             +    +FLA   +  +TG  + VDGG+  R
Sbjct: 230 -QLGGTAVFLASDAAAQITGTTVSVDGGWTAR 260

>pdb|3S55|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE From Mycobacterium Abscessus Bound To Nad Length = 281

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 122/276 (44%), Gaps = 28/276 (10%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIAD-------------IQDELGRQVATS 59
            EGK A+ITGGA G+G + A   A+ GA  I I D               D+L   VA  
Sbjct: 8   FEGKTALITGGARGMGRSHAVALAEAGAD-IAICDRCENSDVVGYPLATADDLAETVALV 66
Query: 60  IGVGK-CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
              G+ C     DV +   +++ V       G +DI  +NAGI  S+   + +++ + +D
Sbjct: 67  EKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGI--STIALLPEVESAQWD 124
Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
            +   N+ G    +   A  M++    G IV  +S+ G      +  Y  SK  VIGL +
Sbjct: 125 EVIGTNLTGTFNTIAAVAPGMIKRNY-GRIVTVSSMLGHSANFAQASYVSSKWGVIGLTK 183
Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAY---GMPAD-------EVEKLFEPQTPLEGV 228
            A+  L  +GI VN V+P  + TP+T + +    M  D       +VE +F         
Sbjct: 184 CAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQYAP 243
Query: 229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
            L+   V  AVLFL    S  +TG  L +D G   R
Sbjct: 244 FLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279

>pdb|3D3W|A Chain A, Structure Of L-Xylulose Reductase With Bound Coenzyme, Phosphate And Hydroxide Length = 244

Iteration: 1
 Score = 87.0 bits (214), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 74/251 (29%), Positives = 119/251 (47%), Gaps = 14/251 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+  ++TG   GIG  T +     GAR++ ++  Q +L   V    G+     V  D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGI---EPVCVDL 61
Query: 73  TN-ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
            + E   +AL      + G +D++ +NA +  +  Q  L++   AFDR F +N+R +   
Sbjct: 62  GDWEATERAL-----GSVGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +  AR ++  GV G+IV  +S          + Y  +K A+  L +  +++LG H IRV
Sbjct: 115 SQIVARGLIARGVPGAIVNVSSQXSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRV 174
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T +    +  P     K    + PL G      HV +A+LFL    S   T
Sbjct: 175 NAVNPTVVMTSMGQATWSDPHK--AKTMLNRIPL-GKFAEVEHVVNAILFLLSDRSGMTT 231
Query: 252 GHDLVVDGGFL 262
           G  L V+GGF 
Sbjct: 232 GSTLPVEGGFW 242

>pdb|1U7T|A Chain A, Crystal Structure Of AbadHSD10 WITH A BOUND INHIBITOR Length = 261

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
           M  A   ++G VA+ITGGASG+G  TA      GA  +++ D+ +  G   A  +G   C
Sbjct: 1   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLL-DLPNSGGEAQAKKLG-NNC 58
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL----DFSAFDRLF 121
            +   DVT+E  V+  +      +G++D+  + AGI  +S    L          F R+ 
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 122 AINVRGMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            +N+ G    ++  A  M +     GG RG I+ TASVA   G   +  Y  SK  ++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA 236
               +  L   GIRV  ++P    TPL      +P ++V      Q P      R G  A
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LP-EKVRNFLASQVPFPS---RLGDPA 231
Query: 237 D-AVLFLACRDSEFVTGHDLVVDG 259
           + A L  A  ++ F+ G  + +DG
Sbjct: 232 EYAHLVQAIIENPFLNGEVIRLDG 255

>pdb|4E3Z|A Chain A, Crystal Structure Of A Oxidoreductase From Rhizobium Etli Cfn 42 Length = 272

Iteration: 1
 Score = 87.0 bits (214), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 116/257 (45%), Gaps = 24/257 (9%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVT 73
            V ++TGG+ GIG    RL A  G R+ V      E    V  +I    G+   +  DV 
Sbjct: 27  PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVG 86
Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           N   + A   +  + +G+LD + +NAGI+    Q V +      +R   +NV G   C  
Sbjct: 87  NAADIAAXFSAVDRQFGRLDGLVNNAGIVDYP-QRVDEXSVERIERXLRVNVTGSILCAA 145
Query: 134 HAAR--VMVEGGVRGSIVCTASVAGSCG-GKRRTDYHMSKHAV----IGLVRSASVQLGV 186
            A R    +  G  G+IV  +S A   G   +  DY  SK A+    IGL R    ++  
Sbjct: 146 EAVRRXSRLYSGQGGAIVNVSSXAAILGSATQYVDYAASKAAIDTFTIGLAR----EVAA 201
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLA 243
            GIRVN V P  + T L  HA G   D   +   P  P +    RAG    VADA+L+L 
Sbjct: 202 EGIRVNAVRPGIIETDL--HASGGLPDRAREX-APSVPXQ----RAGXPEEVADAILYLL 254
Query: 244 CRDSEFVTGHDLVVDGG 260
              + +VTG  L V GG
Sbjct: 255 SPSASYVTGSILNVSGG 271

>pdb|3U0B|A Chain A, Crystal Structure Of An Oxidoreductase From Mycobacterium Smegmatis Length = 454

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 137/270 (50%), Gaps = 36/270 (13%)
Query: 2   ADSSMCNAKNK-LEGKVAIITGGASGIGETTARLFADHGARMIVI-ADIQDELGRQVATS 59
           ADS+     +K L+GKVA++TG A GIG T A +FA  GA ++ I  D   E  ++VA  
Sbjct: 199 ADSTPPADWDKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADK 258
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
           +G      +  DVT +  V  +     +++ G++DI+ +NAGI  + D+ + ++D   +D
Sbjct: 259 VG---GTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGI--TRDKLLANMDEKRWD 313
Query: 119 RLFAINVRGMAACVKHAARVMVEG-------GVRGSIVCTASVAGSCGGKRRTDYHMSKH 171
            + A+N+         A + + EG       G  G ++  +S+AG  G + +T+Y  +K 
Sbjct: 314 AVIAVNL--------LAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKA 365
Query: 172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK----LFEPQTPLEG 227
            +IGL  + +  L   GI +N V+P  + T +T  A  +   EV +    LF+   P++ 
Sbjct: 366 GMIGLAEALAPVLADKGITINAVAPGFIETKMT-EAIPLATREVGRRLNSLFQGGQPVD- 423
Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVV 257
                  VA+ + + A   S  VTG+ + V
Sbjct: 424 -------VAELIAYFASPASNAVTGNTIRV 446

>pdb|1PR9|A Chain A, Human L-Xylulose Reductase Holoenzyme Length = 244

Iteration: 1
 Score = 86.7 bits (213), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 123/254 (48%), Gaps = 20/254 (7%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+  ++TG   GIG  T +     GAR++ ++  Q +L   V    G+     V  D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGI---EPVCVDL 61
Query: 73  TN-ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
            + E   +AL      + G +D++ +NA +  +  Q  L++   AFDR F +N+R +   
Sbjct: 62  GDWEATERAL-----GSVGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQV 114
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD---YHMSKHAVIGLVRSASVQLGVHG 188
            +  AR ++  GV G+IV   +V+  C  +  T+   Y  +K A+  L +  +++LG H 
Sbjct: 115 SQIVARGLIARGVPGAIV---NVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHK 171
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN V+P  + T +    +  P     K    + PL G      HV +A+LFL    S 
Sbjct: 172 IRVNAVNPTVVMTSMGQATWSDPHK--AKTMLNRIPL-GKFAEVEHVVNAILFLLSDRSG 228
Query: 249 FVTGHDLVVDGGFL 262
             TG  L V+GGF 
Sbjct: 229 MTTGSTLPVEGGFW 242

>pdb|3A28|C Chain C, Crystal Structure Of L-2,3-Butanediol Dehydrogenase Length = 258

Iteration: 1
 Score = 86.3 bits (212), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 126/259 (48%), Gaps = 17/259 (6%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-----GKCHYVHC 70
           KVA++TGGA GIG   +   A  G   I +AD+  +   Q A +I +      K  +V  
Sbjct: 3   KVAMVTGGAQGIGRGISEKLAADGFD-IAVADLPQQ-EEQAAETIKLIEAADQKAVFVGL 60
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT++    + +D   +  G  D++ +NAGI  +  + +L++      +++++NV  +  
Sbjct: 61  DVTDKANFDSAIDEAAEKLGGFDVLVNNAGI--AQIKPLLEVTEEDLKQIYSVNVFSVFF 118
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ A+R   E GV+G I+  AS+A   G    + Y  +K AV GL ++A+ +L   G  
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178
Query: 191 VNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           VN  +P  + T +            G P  E  K +     L G       VA  V FLA
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL-GRPSVPEDVAGLVSFLA 237
Query: 244 CRDSEFVTGHDLVVDGGFL 262
             +S +VTG  ++VDGG L
Sbjct: 238 SENSNYVTGQVMLVDGGML 256

>pdb|3PPI|A Chain A, Crystal Structure Of 3-Hydroxyacyl-Coa Dehydrogenase Type-2 From Mycobacterium Avium Length = 281

Iteration: 1
 Score = 85.9 bits (211), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 121/265 (45%), Gaps = 21/265 (7%)
Query: 5   SMCNAKNKLEGKVAIITGGASGIGETTAR-LFADHGARMIVIADIQDELGRQVATSIGVG 63
           SM   K + EG  AI++GGA G+GE T R L AD     +VIAD+  E G+ +A  +G  
Sbjct: 21  SMVTIK-QFEGASAIVSGGAGGLGEATVRRLHAD--GLGVVIADLAAEKGKALADELG-N 76
Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL----DLDFSAFDR 119
           +  +V  +VT+E  V A +++  Q  G+L       G    + + V       D   F +
Sbjct: 77  RAEFVSTNVTSEDSVLAAIEAANQ-LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTK 135
Query: 120 LFAINVRGMAACVKHAARVMV-----EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
              + + G     +  A  +      E G RG++V TAS+AG  G   +T Y  +K  VI
Sbjct: 136 TIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVI 195
Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH 234
           GL  +A+  L   GIRVN ++P  + TP+         +E    F    P    +     
Sbjct: 196 GLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV----GEEALAKFAANIPFPKRLGTPDE 251
Query: 235 VADAVLFLACRDSEFVTGHDLVVDG 259
            ADA  FL      ++ G  + +DG
Sbjct: 252 FADAAAFLLTNG--YINGEVMRLDG 274

>pdb|3SX2|A Chain A, Crystal Structure Of A Putative 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Mycobacterium Paratuberculosis In Complex With Nad Length = 278

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 129/282 (45%), Gaps = 38/282 (13%)
Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG---------RQVAT 58
           +++  L GKVA ITG A G G   A   A  GA +I + D+ D++           ++A 
Sbjct: 6   SSEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAV-DLCDQIASVPYPLATPEELAA 64
Query: 59  SIGV-----GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLD 111
           ++ +      +      DV +   + A + + +   G+LDI+ +NAGI  +S+ D     
Sbjct: 65  TVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDD---- 120
Query: 112 LDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----GKRRTDYH 167
                +  +  +N+ G+   +K A   +V+ G  GSIV  +S AG  G          Y 
Sbjct: 121 ----GWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYV 176
Query: 168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEVEKLFE 220
            +KH V+GL+R  +  L    IRVN + P G+ TP+  + +          A +      
Sbjct: 177 AAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMG 236
Query: 221 PQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL 262
              P+E  VL    VA+AV +L    + ++TG  L VD GFL
Sbjct: 237 NAMPVE--VLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276

>pdb|1JA9|A Chain A, Crystal Structure Of 1,3,6,8-Tetrahydroxynaphthalene Reductase In Complex With Nadph And Pyroquilon Length = 274

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 36/281 (12%)
Query: 1   MADSSMCNAKNKLEGKVAIITGGASG--------IGETTARLFADHGARMIVIADIQDEL 52
           +  S   +A   L GKVA+ TG   G        +G   A +  ++G+      ++  EL
Sbjct: 7   ITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL 66
Query: 53  GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL 112
            +  A  + +        D++   +V AL D  V ++G LD + SN+G+    D+  L++
Sbjct: 67  KKLGAQGVAI------QADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVWCDE--LEV 118
Query: 113 DFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKH 171
               FD++F +N RG     +   +    GG    I+ T+S+A    G      Y  SK 
Sbjct: 119 TQELFDKVFNLNTRGQFFVAQQGLKHCRRGG---RIILTSSIAAVMTGIPNHALYAGSKA 175
Query: 172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPL----TCH-----AYGMPADEVEKLFEPQ 222
           AV G  R+ +V  G  G+ VNC++P G+ T +    + H       GMP +++++     
Sbjct: 176 AVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANM 235
Query: 223 TPLEGVVLRAGHVAD---AVLFLACRDSEFVTGHDLVVDGG 260
            PL+    R G+ AD   AV  L   +SE++ G  + + GG
Sbjct: 236 NPLK----RIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272

>pdb|1VL8|A Chain A, Crystal Structure Of Gluconate 5-dehydrogenase (tm0441) From Thermotoga Maritima At 2.07 A Resolution Length = 267

Iteration: 1
 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 124/255 (48%), Gaps = 15/255 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYVH 69
           L G+VA++TGG+ G+G   A+  A+ G  ++V +   +   E  +++    GV    +  
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAF-R 77
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV+N  +VK L+++  + +G+LD + + AGI          LD   F ++  +N+ G  
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLD--EFRQVIEVNLFGTY 135
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A  ++ E      I   +           + Y  SK  V  L ++ + + G +GI
Sbjct: 136 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 195
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACRD 246
           RVN ++P    T +T   +  P ++++ + + + PL     R G   D     +FLA  +
Sbjct: 196 RVNVIAPGWYRTKMTEAVFSDP-EKLDYMLK-RIPLG----RTGVPEDLKGVAVFLASEE 249
Query: 247 SEFVTGHDLVVDGGF 261
           +++VTG  + VDGG+
Sbjct: 250 AKYVTGQIIFVDGGW 264

>pdb|1SO8|A Chain A, Abeta-bound Human Abad Structure [also Known As 3-hydroxyacyl-coa Dehydrogenase Type Ii (type Ii Hadh), Endoplasmic Reticulum- Associated Amyloid Beta-peptide Binding Protein (erab)] Length = 261

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
           M  A   ++G VA+ITGGASG+G  TA      GA  +++ D+ +  G   A  +G   C
Sbjct: 1   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLL-DLPNSGGEAQAKKLG-NNC 58
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL----DFSAFDRLF 121
            +   DVT+E  V+  +      +G++D+  + AGI  +S    L          F R+ 
Sbjct: 59  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 118
Query: 122 AINVRGMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            +N+ G    ++  A  M +     GG RG I+ TASVA   G   +  Y  SK  ++G+
Sbjct: 119 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 178
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA 236
               +  L   GIRV  ++P    TPL      +P ++V      Q P      R G  A
Sbjct: 179 TLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LP-EKVCNFLASQVPFPS---RLGDPA 231
Query: 237 D-AVLFLACRDSEFVTGHDLVVDG 259
           + A L  A  ++ F+ G  + +DG
Sbjct: 232 EYAHLVQAIIENPFLNGEVIRLDG 255

>pdb|3R3S|A Chain A, Structure Of The Ygha Oxidoreductase From Salmonella Enterica Length = 294

Iteration: 1
 Score = 85.1 bits (209), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 122/248 (49%), Gaps = 16/248 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARM-IVIADIQDELGRQVATSIGV--GKCHYV 68
           +L+ + A++TGG SGIG   A  +A  GA + I     ++E  +QV   I     K   +
Sbjct: 46  RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL 105
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+++E   ++LV    +  G LDI+   AG  ++  + + DL    F + FA+NV  +
Sbjct: 106 PGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIPE-IKDLTSEQFQQTFAVNVFAL 164
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               + A  ++ +G    SI+ T+S+          DY  +K A++   R  + Q+   G
Sbjct: 165 FWITQEAIPLLPKGA---SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKG 221
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACR 245
           IRVN V+P  + T L     G   D++ + F  QTP++    RAG  A+     ++LA +
Sbjct: 222 IRVNIVAPGPIWTALQISG-GQTQDKIPQ-FGQQTPMK----RAGQPAELAPVYVYLASQ 275
Query: 246 DSEFVTGH 253
           +S +VT  
Sbjct: 276 ESSYVTAE 283

>pdb|2O23|A Chain A, The Structure Of Wild-Type Human Hadh2 (17beta-Hydroxysteroid Dehydrogenase Type 10) Bound To Nad+ At 1.2 A Length = 265

Iteration: 1
 Score = 84.7 bits (208), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 78/264 (29%), Positives = 121/264 (45%), Gaps = 19/264 (7%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC 65
           M  A   ++G VA+ITGGASG+G  TA      GA  +++ D+ +  G   A  +G   C
Sbjct: 3   MAAACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLL-DLPNSGGEAQAKKLG-NNC 60
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL----DFSAFDRLF 121
            +   DVT+E  V+  +      +G++D+  + AGI  +S    L          F R+ 
Sbjct: 61  VFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVL 120
Query: 122 AINVRGMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
            +N+ G    ++  A  M +     GG RG I+ TASVA   G   +  Y  SK  ++G+
Sbjct: 121 DVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGM 180
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA 236
               +  L   GIRV  ++P    TPL      +P ++V      Q P      R G  A
Sbjct: 181 TLPIARDLAPIGIRVMTIAPGLFGTPLLTS---LP-EKVCNFLASQVPFPS---RLGDPA 233
Query: 237 D-AVLFLACRDSEFVTGHDLVVDG 259
           + A L  A  ++ F+ G  + +DG
Sbjct: 234 EYAHLVQAIIENPFLNGEVIRLDG 257

>pdb|2Q2Q|A Chain A, Structure Of D-3-Hydroxybutyrate Dehydrogenase From Pseudomonas Putida Length = 255

Iteration: 1
 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 120/266 (45%), Gaps = 30/266 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV-----IADIQDELGRQVATSIGVGKCHY 67
           L+GK A++TG  SGIG   A++ A  GA +++      A    E+ R      GV   H+
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARH-----GVKAVHH 56
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
              D+++  Q++AL     + +G +DI+ +NAGI   +   V      ++D++ A+N+  
Sbjct: 57  -PADLSDVAQIEALFALAEREFGGVDILVNNAGIQHVA--PVEQFPLESWDKIIALNL-- 111
Query: 128 MAACVKHAARVMVEGGVR----GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
             + V H  R+ + G +R    G I+  ASV G  G   +  Y  +KH V+GL +   ++
Sbjct: 112 --SAVFHGTRLALPG-MRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLE 168
Query: 184 LGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVA 236
                +  N + P  + TPL            G P      L   + P    V    H+ 
Sbjct: 169 TATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPE-HLG 227
Query: 237 DAVLFLACRDSEFVTGHDLVVDGGFL 262
           + VLFL       V G    VDGG+L
Sbjct: 228 ELVLFLCSEAGSQVRGAAWNVDGGWL 253

>pdb|4EGF|A Chain A, Crystal Structure Of A L-Xylulose Reductase From Mycobacterium Smegmatis Length = 266

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 17/257 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIA-DIQD------ELGRQVATSIGVGK 64
           +L+GK A+ITG   GIG   AR FA  GAR+++   D+ +       LG Q  T +    
Sbjct: 17  RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDV---- 72
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
            H V  D+        L     + +G LD++ +NAGI  S  Q V+D D   FD   A+N
Sbjct: 73  -HTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGI--SHPQPVVDTDPQLFDATIAVN 129
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           +R  A       + MV  G  G+I+  AS A          Y  SK  ++   +  + +L
Sbjct: 130 LRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLAREL 189
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           G HGIR N V P  + T +    +G  A     +   + PL G       V+DAV++LA 
Sbjct: 190 GPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIA--RIPL-GRFAVPHEVSDAVVWLAS 246
Query: 245 RDSEFVTGHDLVVDGGF 261
             +  + G D+ VDGG+
Sbjct: 247 DAASMINGVDIPVDGGY 263

>pdb|4IQG|C Chain C, Crystal Structure Of Bpro0239 Oxidoreductase From Polaromonas Sp. Js666 In Nadp Bound Form Length = 271

Iteration: 1
 Score = 84.3 bits (207), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 24/257 (9%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIV----IADIQDELGRQVATSIGVGKCHYVHCD 71
           KV +ITGG+ GIG  +A L A  G  + V     +   DE+ RQ+  +   G+   V  D
Sbjct: 26  KVVLITGGSRGIGAASALLAARQGYAVAVNYASNSAAADEVVRQIREA--GGQALAVQAD 83
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT--VLDLDFSAFDRLFAINVRGMA 129
           V  E +V A  ++     G+L  + +NAG++   DQT  V  +      R F INV G  
Sbjct: 84  VAKEREVLAXFETVDAQLGRLSALVNNAGVV---DQTTRVDGITLERLQRXFEINVFGSF 140
Query: 130 ACVKHAARVMVE--GGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSASVQLGV 186
            C + A +      GG  GSIV  +S A   G   +  DY  +K A+       + ++  
Sbjct: 141 LCAREAVKRXSTRYGGSGGSIVNVSSAAARLGSPGQYVDYAAAKGAIDTFTLGLAKEVAT 200
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLA 243
            GIRVN V P  + T +  HA G   +    +  PQ P +    RAG    VA+A+++L 
Sbjct: 201 EGIRVNAVRPGIIETDI--HASGGLPNRARDV-APQVPXQ----RAGTAREVAEAIVWLL 253
Query: 244 CRDSEFVTGHDLVVDGG 260
              + + TG  L V GG
Sbjct: 254 GDQASYTTGALLDVTGG 270

>pdb|1BDB|A Chain A, Cis-Biphenyl-2,3-Dihydrodiol-2,3-Dehydrogenase From Pseudomonas Sp. Lb400 Length = 277

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 83/272 (30%), Positives = 126/272 (46%), Gaps = 34/272 (12%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGK 64
           KL+G+  +ITGGASG+G      F   GA++ V       +A+++ + G  V   +G   
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVG--- 58
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS----DQTVLDLDFSAFDRL 120
                 DV +    K      V  +G++D +  NAGI   S    D     LD +AFD +
Sbjct: 59  ------DVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLD-AAFDEV 111
Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
           F INV+G    VK     +V    RG+++ T S AG         Y  +KHA++GLVR  
Sbjct: 112 FHINVKGYIHAVKACLPALVAS--RGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVREL 169
Query: 181 SVQLGVHGIRVNCVSPHGLATPLT-CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD-- 237
           + +L  + +RVN V   G+ + L    + GM +  +  +  P   +   VL  G + +  
Sbjct: 170 AFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTV--PLADMLKSVLPIGRMPEVE 226
Query: 238 ----AVLFLACR-DSEFVTGHDLVVDGGFLIR 264
               A +F A R D+   TG  L  DGG  +R
Sbjct: 227 EYTGAYVFFATRGDAAPATGALLNYDGGLGVR 258

>pdb|1DOH|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And 4-nitro-inden-1-one Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 18/260 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY--VHC 70
           LEGKVA++TG   GIG   A      G ++IV      E   +V  +I         V  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +V     +  + +  V+ +G+LDI+ SN+G++S     V D+    FDR+F IN RG   
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFF 144
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             + A + +  G   G ++   S+ G      +   Y  SK A+    R  ++ +    I
Sbjct: 145 VAREAYKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 201
Query: 190 RVNCVSPHGLATPL---TCHAY-----GMPADEVEKLFEPQ-TPLEGVVLRAGHVADAVL 240
            VN V+P G+ T +    C  Y      +  +EV++    Q +PL  V L    +A  V 
Sbjct: 202 TVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVVC 260
Query: 241 FLACRDSEFVTGHDLVVDGG 260
           FLA  D  +VTG  + +DGG
Sbjct: 261 FLASNDGGWVTGKVIGIDGG 280

>pdb|1YBV|A Chain A, Structure Of Trihydroxynaphthalene Reductase In Complex With Nadph And An Active Site Inhibitor Length = 283

Iteration: 1
 Score = 84.0 bits (206), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 18/260 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY--VHC 70
           LEGKVA++TG   GIG   A      G ++IV      E   +V  +I         V  
Sbjct: 27  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 86
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +V     +  + +  V+ +G+LDI+ SN+G++S     V D+    FDR+F IN RG   
Sbjct: 87  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGH--VKDVTPEEFDRVFTINTRGQFF 144
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             + A + +  G   G ++   S+ G      +   Y  SK A+    R  ++ +    I
Sbjct: 145 VAREAYKHLEIG---GRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKI 201
Query: 190 RVNCVSPHGLATPL---TCHAY-----GMPADEVEKLFEPQ-TPLEGVVLRAGHVADAVL 240
            VN V+P G+ T +    C  Y      +  +EV++    Q +PL  V L    +A  V 
Sbjct: 202 TVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPI-DIARVVC 260
Query: 241 FLACRDSEFVTGHDLVVDGG 260
           FLA  D  +VTG  + +DGG
Sbjct: 261 FLASNDGGWVTGKVIGIDGG 280

>pdb|3RIH|A Chain A, Crystal Structure Of A Putative Short Chain Dehydrogenase Or Reductase From Mycobacterium Abscessus Length = 293

Iteration: 1
 Score = 83.2 bits (204), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 117/253 (46%), Gaps = 15/253 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT--SIGVGKCHYVHC 70
           L  +  ++TGG  GIG   A +FA  GA + V A    EL    A    +G G    V  
Sbjct: 39  LSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRL 98
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++         + V  +G LD++ +NAGI   +    +  +      +  +NV+G   
Sbjct: 99  DVSDPGSCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPE--QLSEVLDVNVKGTVY 156
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            V+     +   G RG ++ T+S+ G   G    + Y  SK A +G +R+A+++L   G+
Sbjct: 157 TVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGV 215
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE--GVVLRAGHVADAVLFLACRDS 247
            VN + P  +   LT     M  + +  +     P+   G  +  GH+A    FLA  ++
Sbjct: 216 TVNAILPGNI---LTEGLVDMGEEYISGMAR-SIPMGMLGSPVDIGHLA---AFLATDEA 268
Query: 248 EFVTGHDLVVDGG 260
            ++TG  +VVDGG
Sbjct: 269 GYITGQAIVVDGG 281

>pdb|3TJR|A Chain A, Crystal Structure Of A Rv0851c Ortholog Short Chain Dehydrogenase From Mycobacterium Paratuberculosis Length = 301

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 111/225 (49%), Gaps = 11/225 (4%)
Query: 5   SMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG- 63
           SM    +  +G+ A++TGGASGIG  TA  FA  GAR+++    Q  L + V    G G 
Sbjct: 21  SMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF 80
Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
             H V CDV +  ++  L D   +  G +D++FSNAGI+ +     ++ D   +  +  I
Sbjct: 81  DAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHD--DWRWVIDI 138
Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           ++ G    V+     ++E G  G I  TAS AG         Y ++K+ V+GL  + + +
Sbjct: 139 DLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLARE 198
Query: 184 LGVHGIRVNCVSPHGLATPLTCHA-------YGMPADEVEKLFEP 221
           +  +GI V+ + P  + T L  ++       YGM A   E  F P
Sbjct: 199 VKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATP-EGAFGP 242

>pdb|4IIN|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Helicobacter Pylori 26695 Complexed With Nad+ Length = 271

Iteration: 1
 Score = 82.8 bits (203), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 119/256 (46%), Gaps = 14/256 (5%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVI----ADIQDELGRQVATSIGVGKCHY 67
           +  GK  +ITG + GIG   A+  A  G ++ +     A++ D L  ++    G  K   
Sbjct: 26  QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK-GY-KAAV 83
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  D  +E      + + VQ+ G L  + +NAG++   D+  + +    F  +   N+  
Sbjct: 84  IKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVR--DKLAIKMKTEDFHHVIDNNLTS 141
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                + A +VM +    GS+V  AS+ G  G   +T+Y  SK  +I + +S + +  + 
Sbjct: 142 AFIGCREALKVMSKSRF-GSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALR 200
Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            IR N V+P  + T +  +      DE++  +    PL  +   A  VA+AV FL    S
Sbjct: 201 NIRFNSVTPGFIETDMNANL----KDELKADYVKNIPLNRLG-SAKEVAEAVAFLLSDHS 255
Query: 248 EFVTGHDLVVDGGFLI 263
            ++TG  L V+GG  +
Sbjct: 256 SYITGETLKVNGGLYM 271

>pdb|1CYD|A Chain A, Carbonyl Reductase Complexed With Nadph And 2-Propanol Length = 244

Iteration: 1
 Score = 82.4 bits (202), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 117/254 (46%), Gaps = 14/254 (5%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
           K    G  A++TG   GIG  T +     GA+++ +     +L        G+     V 
Sbjct: 2   KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGI---EPVC 58
Query: 70  CDVTN-ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            D+ + +   KAL        G +D++ +NA ++    Q  L++   AFDR F++N+R +
Sbjct: 59  VDLGDWDATEKAL-----GGIGPVDLLVNNAALVIM--QPFLEVTKEAFDRSFSVNLRSV 111
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               +  AR M+  GV GSIV  +S+           Y  +K A+  L ++ +++LG H 
Sbjct: 112 FQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHK 171
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN V+P  + T +       P  E  +  + + PL         V +++LFL    S 
Sbjct: 172 IRVNSVNPTVVLTDMGKKVSADP--EFARKLKERHPLRKFA-EVEDVVNSILFLLSDRSA 228
Query: 249 FVTGHDLVVDGGFL 262
             +G  ++VD G+L
Sbjct: 229 STSGGGILVDAGYL 242

>pdb|2YZ7|A Chain A, X-Ray Analyses Of 3-Hydroxybutyrate Dehydrogenase From Alcaligenes Faecalis Length = 260

Iteration: 1
 Score = 82.0 bits (201), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVAT---SIGVGKCHYV 68
           L+GK A++TG  SGIG   A   A  GA +++    Q E + R+ +T     GV K +Y+
Sbjct: 2   LKGKKAVVTGSTSGIGLAMATELAKAGADVVINGFGQPEDIERERSTLESKFGV-KAYYL 60
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
           + D+++    +  +    +  G LDI+ +NAGI  ++   + +     ++ + A+N+  +
Sbjct: 61  NADLSDAQATRDFIAKAAEALGGLDILVNNAGIQHTAP--IEEFPVDKWNAIIALNLSAV 118
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
                 A  +M + G  G I+  AS  G      ++ Y  +KH V+GL +  +++    G
Sbjct: 119 FHGTAAALPIMQKQG-WGRIINIASAHGLVASVNKSAYVAAKHGVVGLTKVTALENAGKG 177
Query: 189 IRVNCVSPHGLATPLT---------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
           I  N + P  + TPL               + A   E L E Q  L+ V      +  A 
Sbjct: 178 ITCNAICPGWVRTPLVEKQIEAISQQKGIDIEAAARELLAEKQPSLQFVTPE--QLGGAA 235
Query: 240 LFLACRDSEFVTGHDLVVDGGFLIR 264
           +FL+   ++ +TG  L +DGG+  R
Sbjct: 236 VFLSSAAADQMTGTTLSLDGGWTAR 260

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 81.6 bits (200), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 22/250 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+ KV +ITG  +G+G+  A+ FA +GA+ +V+ D +D            G+      DV
Sbjct: 320 LKDKVVLITGAGAGLGKEYAKWFAKYGAK-VVVNDFKDATKTVDEIKAAGGEAWPDQHDV 378
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
             + +  A++ + +  YG +DI+ +NAGIL   D++   +    +D +  +++ G     
Sbjct: 379 AKDSE--AIIKNVIDKYGTIDILVNNAGILR--DRSFAKMSKQEWDSVQQVHLIGTFNLS 434
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A    VE    G I+   S +G  G   + +Y  SK  ++GL ++ +++   + I+VN
Sbjct: 435 RLAWPYFVEKQF-GRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVN 493
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+PH      T     +  ++ + L+            A  VA  +++L   D   VTG
Sbjct: 494 IVAPHA----ETAMTLSIMREQDKNLY-----------HADQVAPLLVYLGTDDVP-VTG 537
Query: 253 HDLVVDGGFL 262
               + GG++
Sbjct: 538 ETFEIGGGWI 547

>pdb|3QLJ|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Mycobacterium Avium Length = 322

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 128/265 (48%), Gaps = 29/265 (10%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL------GRQVATSI------ 60
           ++G+V I+TG   GIG   A  FA  GAR +V+ DI   L      G   A S+      
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSPASGGSAAQSVVDEITA 83
Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
             G+      +V +  Q   L+ + V+ +G LD++ +NAGI+   D+ + +     FD +
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV--RDRMIANTSEEEFDAV 141
Query: 121 FAINVRGMAACVKHAA---RVMVEGG--VRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            A++++G  A ++HAA   R + + G  V G I+ T+S AG  G   + +Y  +K  +  
Sbjct: 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIAT 201
Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHV 235
           L    + ++G +G+ VN ++P    T +T   +       ++ F+   P         +V
Sbjct: 202 LTLVGAAEMGRYGVTVNAIAPSAR-TRMTETVFAEMMATQDQDFDAMAPE--------NV 252
Query: 236 ADAVLFLACRDSEFVTGHDLVVDGG 260
           +  V++L   ++  VTG    V+GG
Sbjct: 253 SPLVVWLGSAEARDVTGKVFEVEGG 277

>pdb|1XQ1|A Chain A, X-Ray Structure Of Putative Tropinone Reducatse From Arabidopsis Thaliana Gene At1g07440 Length = 266

Iteration: 1
 Score = 81.3 bits (199), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 74/267 (27%), Positives = 120/267 (44%), Gaps = 29/267 (10%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL----------GRQVATS 59
           +  L+ K  ++TGG  GIG      FA  GA +   A  + EL          G QV  S
Sbjct: 9   RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGS 68
Query: 60  IGVGKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFD 118
           +         CD +   + + L+ +    +G +LDI+ +N G + S       LD++A D
Sbjct: 69  V---------CDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKP----TLDYTAED 115
Query: 119 RLFAINVRGMAAC-VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
             F I+    +A  +   A  +++    G+I+  +S+AG       + Y  +K A+  L 
Sbjct: 116 FSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLA 175
Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
           R+ + +    GIR N V+P  +ATPL    Y    DE +K+   + PL G       V+ 
Sbjct: 176 RNLACEWASDGIRANAVAPAVIATPLAEAVYD---DEFKKVVISRKPL-GRFGEPEEVSS 231
Query: 238 AVLFLACRDSEFVTGHDLVVDGGFLIR 264
            V FL    + ++TG  + VDGG  + 
Sbjct: 232 LVAFLCMPAASYITGQTICVDGGLTVN 258

>pdb|2C07|A Chain A, Oxoacyl-Acp Reductase Of Plasmodium Falciparum Length = 285

Iteration: 1
 Score = 80.9 bits (198), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 11/250 (4%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQV--ATSIGVGKCHYVHCD 71
           E KVA++TG   GIG   A++ A   + +I I+  Q      V    S G     Y   D
Sbjct: 43  ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYA-GD 101
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V+ + ++  +++  +  +  +DI+ +NAGI  + D   L +    ++ +   N+  +   
Sbjct: 102 VSKKEEISEVINKILTEHKNVDILVNNAGI--TRDNLFLRMKNDEWEDVLRTNLNSLFYI 159
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +  ++ M+     G I+  +S+ G  G   + +Y  SK  VIG  +S + +L    I V
Sbjct: 160 TQPISKRMINNRY-GRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITV 218
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N ++P  +++ +T       +++++K      P  G +     VA+   FL+   S ++ 
Sbjct: 219 NAIAPGFISSDMTDKI----SEQIKKNIISNIP-AGRMGTPEEVANLACFLSSDKSGYIN 273
Query: 252 GHDLVVDGGF 261
           G   V+DGG 
Sbjct: 274 GRVFVIDGGL 283

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 115/257 (44%), Gaps = 37/257 (14%)
Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           ++TGG+ GIG+    L   +    ++  DIQ         S       ++  D+T +  +
Sbjct: 8   LVTGGSKGIGKAVVELLLQNKNHTVINIDIQQ--------SFSAENLKFIKADLTKQQDI 59
Query: 79  KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV-------RGMAAC 131
             ++D  ++N    D +F NAGIL     ++ D+D  +  ++  +NV       +G+   
Sbjct: 60  TNVLD-IIKNVS-FDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWSSIYFIKGLENN 115
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           +K  A ++  G  +  I    S A          Y +SK A+    +S ++ L  + IRV
Sbjct: 116 LKVGASIVFNGSDQCFIAKPNSFA----------YTLSKGAIAQXTKSLALDLAKYQIRV 165
Query: 192 NCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           N V P  + T L         +  G+  DE +K  E + PL  +  +   +A+ V+FL  
Sbjct: 166 NTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIA-QPQEIAELVIFLLS 224
Query: 245 RDSEFVTGHDLVVDGGF 261
             S+F TG  + +DGG+
Sbjct: 225 DKSKFXTGGLIPIDGGY 241

>pdb|3SVT|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 281

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 11/205 (5%)
Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
           G   Y   D+TNE +    VD+    +G+L  +   AG  S +   +  +D  A+ R   
Sbjct: 63  GAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAG-GSENIGPITQVDSEAWRRTVD 121
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           +NV G    +KHAAR MV GG  GS V  +S+A S   +    Y ++K AV  L++ A+ 
Sbjct: 122 LNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAAD 180
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA---V 239
           +LG   +RVN + P  + T L   A    + E+   +   TPL     R G V D     
Sbjct: 181 ELGASWVRVNSIRPGLIRTDLV--AAITESAELSSDYAMCTPLP----RQGEVEDVANMA 234
Query: 240 LFLACRDSEFVTGHDLVVDGGFLIR 264
           +FL    + FVTG  + VDGG ++R
Sbjct: 235 MFLLSDAASFVTGQVINVDGGQMLR 259

>pdb|2RHR|B Chain B, P94l Actinorhodin Ketordeuctase Mutant, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 79.3 bits (194), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSS------SDQTVLDLDFSAFDRLFAINVRGM 128
             +++ALV + V+ YG +D++ +NAG L        +D+  LD+           N+ G+
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDV--------VETNLTGV 134
Query: 129 AACVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
               K   +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L  
Sbjct: 135 FRVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 193
Query: 187 HGIRVNCVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
            GI VN V P  + TP+           + +  +E       + P+ G  ++   VA+ V
Sbjct: 194 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMV 252
Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
            +L    +  VT   L V GG 
Sbjct: 253 AYLIGPGAAAVTAQALNVCGGL 274

>pdb|3CSD|B Chain B, Actinorhodin Polyketide Ketoreductase Mutant P94l Bound To Nadph And The Inhibitor Emodin Length = 281

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 116/262 (44%), Gaps = 26/262 (9%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSS------SDQTVLDLDFSAFDRLFAINVRGM 128
             +++ALV + V+ YG +D++ +NAG L        +D+  LD+           N+ G+
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAGRLGGGATAELADELWLDV--------VETNLTGV 138
Query: 129 AACVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
               K   +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L  
Sbjct: 139 FRVTKQVLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELAR 197
Query: 187 HGIRVNCVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
            GI VN V P  + TP+           + +  +E       + P+ G  ++   VA+ V
Sbjct: 198 TGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMV 256
Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
            +L    +  VT   L V GG 
Sbjct: 257 AYLIGPGAAAVTAQALNVCGGL 278

>pdb|2CF2|E Chain E, Architecture Of Mammalian Fatty Acid Synthase Length = 226

Iteration: 1
 Score = 79.0 bits (193), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 118/250 (47%), Gaps = 25/250 (10%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             EGK+A++TG + GIG   A   A  GA+  VI     E G Q  +         +  +
Sbjct: 2   NFEGKIALVTGASRGIGRAIAETLAARGAK--VIGTATSENGAQAISDYLGANGKGLMLN 59
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   ++++++     +G++DI+ +NAGI  + D  ++ +    ++ +   N+  +   
Sbjct: 60  VTDPASIESVLEKIRAEFGEVDILVNNAGI--TRDNLLMRMKDEEWNDIIETNLSSVFRL 117
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K   R M++    G I+       + GG+   +Y  +K  +IG  +S + ++   GI V
Sbjct: 118 SKAVMRAMMK-KRHGRII-------TIGGQ--ANYAAAKAGLIGFSKSLAREVASRGITV 167
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N V+P  + T          +D+       Q P  G +  A  +A+AV FLA  ++ ++T
Sbjct: 168 NVVAPGFIET----------SDDQRAGILAQVP-AGRLGGAQEIANAVAFLASDEAAYIT 216
Query: 252 GHDLVVDGGF 261
           G  L V+GG 
Sbjct: 217 GETLHVNGGM 226

>pdb|4DC0|A Chain A, Crystal Structure Of F189w Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 78.6 bits (192), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    K 
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 135 AARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   GI VN
Sbjct: 145 VLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 193 CVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L   
Sbjct: 204 AVCPGWVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP 262
Query: 246 DSEFVTGHDLVVDGGF 261
            +  VT   L V GG 
Sbjct: 263 GAAAVTAQALNVCGGL 278

>pdb|3AI1|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Reveals The Structure Bases Of Its Catalytic Mechanism And High Substrate Selectivity Length = 263

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 24/265 (9%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           + GKVA+ITG +SGIG   A  FA  GA ++++A   D L    R +    GV +   V 
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVA 63
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV     V A+V+S   ++G  DI+ +NAG  + S++T+++     +   + ++V  MA
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAG--TGSNETIMEAADEKWQFYWELHV--MA 119
Query: 130 ACVKHAARVMVEGGVR----GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
           A     AR +V  G+R    G+I+  AS+           Y+++K A++   ++ + ++ 
Sbjct: 120 AV--RLARGLVP-GMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 186 VHGIRVNCVSPHGLATP--------LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
              IRVNC++P  + TP        LT    G     ++ + +   P++        +A+
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA-SPEELAN 235
Query: 238 AVLFLACRDSEFVTGHDLVVDGGFL 262
             +FL    + +  G    VDGG L
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGML 260

>pdb|3ENN|A Chain A, 2.1a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE FROM BRUCELLA Melitensis (P43212) Length = 249

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 10/249 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+ A++TG   G+GE  AR     GA ++ +   ++E  +++A  +G  +      ++
Sbjct: 8   LTGRKALVTGATGGLGEAIARALHAQGA-IVGLHGTREEKLKELAAELGE-RIFVFPANL 65
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++   VKAL     +  G +DI+ +NAGI  + D   + +    +D +  +N+  +    
Sbjct: 66  SDREAVKALGQKAEEEMGGVDILVNNAGI--TRDGLFVRMSDEDWDAVLTVNLTSVFNLT 123
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +     M+     G I+   S+ G  G   + +Y  SK  +IG  +S + ++    + VN
Sbjct: 124 RELTHPMMRR-RNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN 182
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
           C++P  + + +T    G   ++ +       P++ + + A  +A AV++LA  ++ +VTG
Sbjct: 183 CIAPGFIESAMT----GKLNEKQKDAIMGNIPMKRMGVGA-DIAAAVVYLASDEAAYVTG 237
Query: 253 HDLVVDGGF 261
             L V+GG 
Sbjct: 238 QTLHVNGGM 246

>pdb|3EMK|A Chain A, 2.5a Crystal Structure Of GlucoseRIBITOL DEHYDROGENASE From Brucella Melitensis Length = 246

Iteration: 1
 Score = 78.2 bits (191), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 61/249 (24%), Positives = 122/249 (48%), Gaps = 10/249 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+ A++TG   G+GE  AR     GA ++ +   ++E  +++A  +G  +      ++
Sbjct: 5   LTGRKALVTGATGGLGEAIARALHAQGA-IVGLHGTREEKLKELAAELGE-RIFVFPANL 62
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++   VKAL     +  G +DI+ +NAGI  + D   + +    +D +  +N+  +    
Sbjct: 63  SDREAVKALGQKAEEEMGGVDILVNNAGI--TRDGLFVRMSDEDWDAVLTVNLTSVFNLT 120
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +     M+     G I+   S+ G  G   + +Y  SK  +IG  +S + ++    + VN
Sbjct: 121 RELTHPMMRR-RNGRIINITSIVGVTGNPGQANYCASKAGLIGFSKSLAQEIASRNVTVN 179
Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
           C++P  + + +T    G   ++ +       P++ + + A  +A AV++LA  ++ +VTG
Sbjct: 180 CIAPGFIESAMT----GKLNEKQKDAIMGNIPMKRMGVGA-DIAAAVVYLASDEAAYVTG 234
Query: 253 HDLVVDGGF 261
             L V+GG 
Sbjct: 235 QTLHVNGGM 243

>pdb|3GRP|A Chain A, 2.1 Angstrom Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reductase From Bartonella Henselae Length = 266

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 123/260 (47%), Gaps = 30/260 (11%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           KL G+ A++TG   GIGE  AR F   GA + +    +D+L +++A  +G         +
Sbjct: 24  KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL-KEIAADLG-KDVFVFSAN 81
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++   +K L +   +    +DI+ +NAGI  + D   + +    +D + A+N+   +  
Sbjct: 82  LSDRKSIKQLAEVAEREMEGIDILVNNAGI--TRDGLFVRMQDQDWDDVLAVNLTAASTL 139
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +     M+     G I+   S+ G  G   +T+Y  +K  +IG  ++ + ++    I V
Sbjct: 140 TRELIHSMMRRRY-GRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITV 198
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQT-------PLEGVVLRAG---HVADAVLF 241
           NC++P  + + +T           +KL E Q        P++    R G    +A A ++
Sbjct: 199 NCIAPGFIKSAMT-----------DKLNEKQKEAIMAMIPMK----RMGIGEEIAFATVY 243
Query: 242 LACRDSEFVTGHDLVVDGGF 261
           LA  ++ ++TG  L ++GG 
Sbjct: 244 LASDEAAYLTGQTLHINGGM 263

>pdb|4AFN|A Chain A, Crystal Structure Of 3-ketoacyl-(acyl-carrier-protein) Reductase (fabg) From Pseudomonas Aeruginosa At 2.3a Resolution Length = 269

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 125/255 (49%), Gaps = 15/255 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-RQVATSI---GVGKCHYV 68
           L+GKVA++TG + GIG+  A      GA  +VI       G  ++A ++   GV     V
Sbjct: 25  LQGKVALVTGASRGIGQAIALELGRLGA--VVIGTATSASGAEKIAETLKANGVEGAGLV 82
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV+++  V A ++   Q+ GQ  I+ +NAGI  + D  ++ +    +  +   N+  +
Sbjct: 83  -LDVSSDESVAATLEHIQQHLGQPLIVVNNAGI--TRDNLLVRMKDDEWFDVVNTNLNSL 139
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               K   R M +    G I+   SV G+ G   +T+Y  +K  + G  R+ + ++G   
Sbjct: 140 YRLSKAVLRGMTKA-RWGRIINIGSVVGAMGNAGQTNYAAAKAGLEGFTRALAREVGSRA 198
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           I VN V+P  + T +T     +P  + E L   Q PL G + +A  +A  V FLA   + 
Sbjct: 199 ITVNAVAPGFIDTDMTRE---LPEAQREALL-GQIPL-GRLGQAEEIAKVVGFLASDGAA 253
Query: 249 FVTGHDLVVDGGFLI 263
           +VTG  + V+GG  +
Sbjct: 254 YVTGATVPVNGGMYM 268

>pdb|3U5T|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Sinorhizobium Meliloti Length = 267

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 21/254 (8%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           KVAI+TG + GIG   A   A  G  +++    +     +VA  I    GK      DV+
Sbjct: 28  KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS 87
Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +   V+ L  +  + +G +D++ +NAGI   +  T+ +   + FDR+ A+N++G    ++
Sbjct: 88  DPAAVRRLFATAEEAFGGVDVLVNNAGIXPLT--TIAETGDAVFDRVIAVNLKGTFNTLR 145
Query: 134 HAARVMVEGG--VRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            AA+ +  GG  +  S      +  S G      Y  +K  V       S +L    I V
Sbjct: 146 EAAQRLRVGGRIINXSTSQVGLLHPSYG-----IYAAAKAGVEAXTHVLSKELRGRDITV 200
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLACRDSE 248
           N V+P   AT L        +DEV   F    PLE    R G    +A AV FLA  D  
Sbjct: 201 NAVAPGPTATDLFLEGK---SDEVRDRFAKLAPLE----RLGTPQDIAGAVAFLAGPDGA 253
Query: 249 FVTGHDLVVDGGFL 262
           +V G  L  +GG +
Sbjct: 254 WVNGQVLRANGGII 267

>pdb|3V2G|A Chain A, Crystal Structure Of A DehydrogenaseREDUCTASE FROM SINORHIZOBIUM Meliloti 1021 Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 113/254 (44%), Gaps = 18/254 (7%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVH 69
            L GK A +TGG+ GIG   A+  A  GA + +      E  + V + I    G+   + 
Sbjct: 28  SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIR 87
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS---DQTVLDLDFSAFDRLFAINVR 126
            D  +   ++  +  TV+  G LDI+ ++AGI  S+   + TV D     FD + A+N R
Sbjct: 88  ADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVAD-----FDEVXAVNFR 142
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                ++ A+R + +GG    I   +++A        + Y  SK A+ GL +  +  LG 
Sbjct: 143 APFVAIRSASRHLGDGGR--IITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGP 200
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            GI VN V P    T         PAD      + +    G       +A  V +LA   
Sbjct: 201 RGITVNIVHPGSTDTDXN------PADGDHAEAQRERIATGSYGEPQDIAGLVAWLAGPQ 254
Query: 247 SEFVTGHDLVVDGG 260
            +FVTG  L +DGG
Sbjct: 255 GKFVTGASLTIDGG 268

>pdb|4DC1|A Chain A, Crystal Structure Of Y202f Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 77.8 bits (190), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    K 
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 135 AARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   GI VN
Sbjct: 145 VLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 193 CVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L   
Sbjct: 204 AVCPGFVETPMAASVREHFSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP 262
Query: 246 DSEFVTGHDLVVDGGF 261
            +  VT   L V GG 
Sbjct: 263 GAAAVTAQALNVCGGL 278

>pdb|2Z1N|A Chain A, Crystal Structure Of Ape0912 From Aeropyrum Pernix K1 Length = 260

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/258 (25%), Positives = 121/258 (46%), Gaps = 15/258 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           ++GK+A++T G+SG+G  +A   A +GAR+++ +  +++L     ++A+ +   +   V 
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVA 64
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+     +  L +   ++ G  DI+  + G         ++L    +D  + +  R   
Sbjct: 65  GDIREPGDIDRLFEKA-RDLGGADILVYSTG--GPRPGRFMELGVEDWDESYRLLARSAV 121
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + AA  MVE G  G +V   SV      +     ++ +  VIG+VR+ +++L  HG+
Sbjct: 122 WVGRRAAEQMVEKGW-GRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGV 180
Query: 190 RVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
            VN V P  + T              G+  +E  K    + P+ G V +   +A  V FL
Sbjct: 181 TVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPEELASVVAFL 239
Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   + F+TG  + VDGG
Sbjct: 240 ASEKASFITGAVIPVDGG 257

>pdb|1X7G|A Chain A, Actinorhodin Polyketide Ketoreductase, Act Kr, With Nadp Bound Length = 261

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 7   EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 66
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    K 
Sbjct: 67  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 124
Query: 135 AARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   GI VN
Sbjct: 125 VLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 183
Query: 193 CVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L   
Sbjct: 184 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP 242
Query: 246 DSEFVTGHDLVVDGGF 261
            +  VT   L V GG 
Sbjct: 243 GAAAVTAQALNVCGGL 258

>pdb|1W4Z|A Chain A, Structure Of Actinorhodin Polyketide (Actiii) Reductase Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    K 
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 135 AARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   GI VN
Sbjct: 145 VLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 193 CVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L   
Sbjct: 204 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP 262
Query: 246 DSEFVTGHDLVVDGGF 261
            +  VT   L V GG 
Sbjct: 263 GAAAVTAQALNVCGGL 278

>pdb|4DBZ|A Chain A, Crystal Structure Of V151l Actinorhodin Polyketide Ketoreductase With Nadph Length = 281

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 27  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 86
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    K 
Sbjct: 87  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 144
Query: 135 AARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   GI VN
Sbjct: 145 VLKAGGMLERGT-GRIVNIASTGGKQGLVHAAPYSASKHGVVGFTKALGLELARTGITVN 203
Query: 193 CVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L   
Sbjct: 204 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP 262
Query: 246 DSEFVTGHDLVVDGGF 261
            +  VT   L V GG 
Sbjct: 263 GAAAVTAQALNVCGGL 278

>pdb|2RH4|A Chain A, Actinorhodin Ketoreductase, Actkr, With Nadph And Inhibitor Emodin Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 113/256 (44%), Gaps = 14/256 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
           +VA++TG  SGIG   AR     G R+ V A  ++ L   +      G +     CDV +
Sbjct: 23  EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRS 82
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    K 
Sbjct: 83  VPEIEALVAAVVERYGPVDVLVNNAG--RPGGGATAELADELWLDVVETNLTGVFRVTKQ 140
Query: 135 AARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   GI VN
Sbjct: 141 VLKAGGMLERGT-GRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN 199
Query: 193 CVSPHGLATPLTCHA-------YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L   
Sbjct: 200 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIGP 258
Query: 246 DSEFVTGHDLVVDGGF 261
            +  VT   L V GG 
Sbjct: 259 GAAAVTAQALNVCGGL 274

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 77.4 bits (189), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 119/256 (46%), Gaps = 19/256 (7%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           L  KVA ITGG SGIG   A +F  HG   ++ +     +    R++A + G  +C  + 
Sbjct: 25  LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGR-RCLPLS 83
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAINVRG 127
            DV     V A VD  ++ +G++DI+ + A    L  +      L F+AF  +  I+  G
Sbjct: 84  MDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFLCPAGA----LSFNAFKTVMDIDTSG 139
Query: 128 MAACVKHAARVMVEGGVR---GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
                 + +RV+ E   R   G IV   +  G+ G   +     +K AV  + R  +V+ 
Sbjct: 140 ----TFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEW 195
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           G   IRVN ++P  ++        G P   +       +PL+ +  +   +A +VL+LA 
Sbjct: 196 GPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVT-ASPLQRLGNKT-EIAHSVLYLAS 253
Query: 245 RDSEFVTGHDLVVDGG 260
             + +VTG  LV DGG
Sbjct: 254 PLASYVTGAVLVADGG 269

>pdb|3AI3|A Chain A, The Crystal Structure Of L-Sorbose Reductase From Gluconobacter Frateurii Complexed With Nadph And L-Sorbose Length = 263

Iteration: 1
 Score = 77.0 bits (188), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/265 (27%), Positives = 124/265 (46%), Gaps = 24/265 (9%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           + GKVA+ITG +SGIG   A  FA  GA ++++A   D L    R +    GV +   V 
Sbjct: 5   ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVA 63
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV     V A+V+S   ++G  DI+ +NAG  + S++T+++    A D  +      + 
Sbjct: 64  VDVATPEGVDAVVESVRSSFGGADILVNNAG--TGSNETIME----AADEKWQFYWELLV 117
Query: 130 ACVKHAARVMVEGGVR----GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
                 AR +V  G+R    G+I+  AS+           Y+++K A++   ++ + ++ 
Sbjct: 118 MAAVRLARGLVP-GMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVI 176
Query: 186 VHGIRVNCVSPHGLATP--------LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
              IRVNC++P  + TP        LT    G     ++ + +   P++        +A+
Sbjct: 177 KDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKRFA-SPEELAN 235
Query: 238 AVLFLACRDSEFVTGHDLVVDGGFL 262
             +FL    + +  G    VDGG L
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGML 260

>pdb|3TPC|A Chain A, Crystal Structure Of A Hypothtical Protein Sma1452 From Sinorhizobium Meliloti 1021 Length = 257

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 99/213 (46%), Gaps = 20/213 (9%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ +V I+TG +SG+G    R  A  GA ++ + D++   G + A  +G     + + D
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRXLAQEGATVLGL-DLKPPAGEEPAAELGAA-VRFRNAD 61
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAG------ILSSSDQTVLDLDFSAFDRLFAINV 125
           VTNE    A +    Q +G +  + + AG      IL  S    LD    +F R  A+N+
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALD----SFARTVAVNL 117
Query: 126 RGMAACVKHAARVMVEG-----GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
            G    ++ AA V  +G     G RG IV TAS+A   G   +  Y  SK  V  L   A
Sbjct: 118 IGTFNXIRLAAEVXSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPA 177
Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD 213
           + +L   GIRV  ++P    TP      G P D
Sbjct: 178 ARELARFGIRVVTIAPGIFDTPXXA---GXPQD 207

>pdb|4HP8|A Chain A, Crystal Structure Of A Putative 2-Deoxy-D-Gluconate 3-Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506435) With Bound Nadp Length = 247

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/257 (28%), Positives = 118/257 (45%), Gaps = 21/257 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           LEG+ A++TG  +G+G+  A   A  GA ++  A    +    +    G G    +  D 
Sbjct: 7   LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDG-GNASALLIDF 65
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAINVRGMAAC 131
            +    K   DS        DI+ +NAGI+  +D     +LD+   D +  +N++ +   
Sbjct: 66  ADPLAAK---DSFTD--AGFDILVNNAGIIRRADSVEFSELDW---DEVMDVNLKALFFT 117
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +  A+ ++  G  G +V  AS+    GG R   Y  +KH V GL +  + +    GI V
Sbjct: 118 TQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINV 177
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL-RAGH---VADAVLFLACRDS 247
           N ++P  + T  T     + AD        +  LE +   R GH   +A A +FL+   +
Sbjct: 178 NAIAPGYIETNNT---EALRADAARN----KAILERIPAGRWGHSEDIAGAAVFLSSAAA 230
Query: 248 EFVTGHDLVVDGGFLIR 264
           ++V G  L VDGG+L R
Sbjct: 231 DYVHGAILNVDGGWLAR 247

>pdb|3OIC|A Chain A, Crystal Structure Of Enoyl-Acp Reductases Iii (Fabl) From B. Subtilis (Apo Form) Length = 258

Iteration: 1
 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/254 (26%), Positives = 119/254 (46%), Gaps = 18/254 (7%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHC 70
           + K A++TG + G+G+  A   A++G  +++      +   + A  I   GV K   V  
Sbjct: 3   QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGV-KVLVVKA 61
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNA--GILSSSDQTVLDLDFSAFDRLFAINVRGM 128
           +V    ++K +     + +G+LD+  +NA  G+L    + V++L+ + +D    IN + +
Sbjct: 62  NVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL----RPVMELEETHWDWTMNINAKAL 117
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             C + AA++M + G  G IV  +S+      +  T   +SK A+  L R  +V+L    
Sbjct: 118 LFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQ 176
Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP--QTPLEGVVLRAGHVADAVLFLACRD 246
           I VN VS   + T    H    P    E L E   Q    G ++    + D V FL    
Sbjct: 177 IIVNAVSGGAIDTDALKH---FPNR--EDLLEDARQNTPAGRMVEIKDMVDTVEFLVSSK 231
Query: 247 SEFVTGHDLVVDGG 260
           ++ + G  ++VDGG
Sbjct: 232 ADMIRGQTIIVDGG 245

>pdb|1UZL|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 118/266 (44%), Gaps = 28/266 (10%)
Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M  ++   AK     +  ++TGG  GIG   A+  A  G ++ V                
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV-----------THRGS 49
Query: 61  GVGKCHY-VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
           G  K  + V CDVT+   V     +  ++ G ++++ SNAG+  S+D  ++ +    F++
Sbjct: 50  GAPKGLFGVECDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEK 107
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           +   N+ G     + A+R M      G ++   SV+GS G   + +Y  SK  VIG+ RS
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKF-GRMIFIGSVSGSWGIGNQANYAASKAGVIGMARS 166
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ----TPLEGVVLRAGHV 235
            + +L    +  N V+P  + T +T  A      +    F P     TP E        V
Sbjct: 167 IARELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPAKRVGTPAE--------V 217
Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGF 261
           A  V FLA  D+ +++G  + VDGG 
Sbjct: 218 AGVVSFLASEDASYISGAVIPVDGGM 243

>pdb|1MXH|A Chain A, Crystal Structure Of Substrate Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/275 (28%), Positives = 118/275 (42%), Gaps = 36/275 (13%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGKC 65
           E   A+ITGGA  IG + A      G R++V           +  EL    A S  + K 
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKG 69
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI-----LSSSDQTVLDLDFSAFD-- 118
                    +C  + ++D + + +G+ D++ +NA       L   D T    D    D  
Sbjct: 70  DLSLSSSLLDC-CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128
Query: 119 --RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD--------YHM 168
              LF  N       ++  AR   EGG   S     SV   C     TD        Y M
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSR--NLSVVNLCDAM--TDLPLPGFCVYTM 184
Query: 169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV 228
           +KHA+ GL R+A+++L    IRVN V+P      L+     MP  E ++ +  + PL   
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPG-----LSLLPPAMP-QETQEEYRRKVPLGQS 238
Query: 229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
              A  +ADA+ FL  +D+ ++TG  L VDGG ++
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|3V8B|A Chain A, Crystal Structure Of A 3-Ketoacyl-Acp Reductase From Sinorhizobium Meliloti 1021 Length = 283

Iteration: 1
 Score = 76.3 bits (186), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 118/254 (46%), Gaps = 13/254 (5%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTN 74
            VA+ITG  SGIG  TA   A  G  +  +   + E+       +G G +   +  DV++
Sbjct: 29  PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSD 88
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
           E Q +  V   V  +G LDI+ +NAGI +     + DL    +D   A+N+RG    +  
Sbjct: 89  ELQXRNAVRDLVLKFGHLDIVVANAGI-NGVWAPIDDLKPFEWDETIAVNLRGTFLTLHL 147
Query: 135 AARVMVEGGVRGSIVCTASVAGS----CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               + + G  G+IV  +S+ G+      G        +    + +V+  +++LG H IR
Sbjct: 148 TVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQ--VAIVQQLALELGKHHIR 204
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFE-P--QTPL-EGVVLRAGHVADAVLFLACRD 246
           VN V P  + T ++ +      +E     E P  Q P+ +G   R+  VA+ + FL    
Sbjct: 205 VNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVSER 264
Query: 247 SEFVTGHDLVVDGG 260
           +  VTG  + +DGG
Sbjct: 265 ARHVTGSPVWIDGG 278

>pdb|4DYV|A Chain A, Crystal Structure Of A Short-Chain DehydrogenaseREDUCTASE SDR FROM Xanthobacter Autotrophicus Py2 Length = 272

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 12/236 (5%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           +K   K+AI+TG  SG+G   A   A  G  + +     D L ++ A  IG      V  
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDAL-QETAAEIG-DDALCVPT 81
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+   V+AL  +TV+ +G++D++F+NAG  + +     DL F+ + ++   N+ G   
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPA-IPXEDLTFAQWKQVVDTNLTGPFL 140
Query: 131 CVKHAARVMVEGGVRGS-IVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
           C + A RV      RG  I+   S++ +        Y  +KHA+ GL +S S+   VH I
Sbjct: 141 CTQEAFRVXKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200
Query: 190 RVNCVSPHGLATPLTCHAY-GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
               +      TP       G+P  ++    EP       V    HVA AV++ A 
Sbjct: 201 ACGQIDIGNADTPXAQKXKAGVPQADLSIKVEP-------VXDVAHVASAVVYXAS 249

>pdb|3V2H|A Chain A, The Crystal Structure Of D-Beta-Hydroxybutyrate Dehydrogenase From Sinorhizobium Meliloti Length = 281

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 27/263 (10%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGKCHY 67
           K A+ITG  SGIG   AR  A  GA +++        I  + DE+       +  G   +
Sbjct: 26  KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVA-----GLSSGTVLH 80
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
              D T   ++          +G  DI+ +NAG+     + + D     +DR+ A+N+  
Sbjct: 81  HPADXTKPSEIADXXAXVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLSS 138
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               ++ A     + G  G I+  AS  G      ++ Y  +KH + GL ++ ++++   
Sbjct: 139 SFHTIRGAIPPXKKKG-WGRIINIASAHGLVASPFKSAYVAAKHGIXGLTKTVALEVAES 197
Query: 188 GIRVNCVSPHGLATPLT-------CHAYGMPADEV--EKLFEPQTPLEGVVLRAGHVADA 238
           G+ VN + P  + TPL            G+  ++V  E   + Q   + + +    VA  
Sbjct: 198 GVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVXLKGQPTKKFITVE--QVASL 255
Query: 239 VLFLACRDSEFVTGHDLVVDGGF 261
            L+LA  D+  +TG  +  DGG+
Sbjct: 256 ALYLAGDDAAQITGTHVSXDGGW 278

>pdb|1AE1|A Chain A, Tropinone Reductase-I Complex With Nadp Length = 273

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 124/267 (46%), Gaps = 16/267 (5%)
Query: 5   SMCNAKNK----LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVAT 58
           SM N  N+    L+G  A++TGG+ GIG       A  GAR+   +  + EL    ++  
Sbjct: 7   SMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWR 66
Query: 59  SIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAF 117
             G+     V CD+ +  +   L+ +    + G+L+I+ +NAG++   +      DF+  
Sbjct: 67  EKGLNVEGSV-CDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAK----DFTEK 121
Query: 118 DRLFAINVRGMAAC-VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           D    +     AA  +   A  +++    G+++  +S+AG       + Y  SK A+  +
Sbjct: 122 DYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQM 181
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL--FEPQTPLEGVVLRAGH 234
            +S + +     IRVN V+P  + TPL   A      + E++  F  +TP+ G   +   
Sbjct: 182 TKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQE 240
Query: 235 VADAVLFLACRDSEFVTGHDLVVDGGF 261
           V+  + FL    + ++TG  +  DGGF
Sbjct: 241 VSALIAFLCFPAASYITGQIIWADGGF 267

>pdb|2PH3|A Chain A, Crystal Structure Of 3-oxoacyl-[acyl Carrier Protein] Reductase Ttha0415 From Thermus Thermophilus Length = 245

Iteration: 1
 Score = 75.9 bits (185), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 8/182 (4%)
Query: 80  ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVM 139
           ALV    +  G LD + +NAGI  + D  ++ +    ++ +   N+  +    + A ++M
Sbjct: 69  ALVHQAAEVLGGLDTLVNNAGI--TRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLM 126
Query: 140 VEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGL 199
           ++    G IV   SV G  G   + +Y  SK  +IG  R+ + +    GI VN V+P  +
Sbjct: 127 MKARF-GRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFI 185
Query: 200 ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDG 259
            T +T     +P  EV++ +  Q P  G   R   VA+AV FL    + ++TG  L VDG
Sbjct: 186 ETEMTER---LP-QEVKEAYLKQIP-AGRFGRPEEVAEAVAFLVSEKAGYITGQTLCVDG 240
Query: 260 GF 261
           G 
Sbjct: 241 GL 242

>pdb|2B4Q|A Chain A, Pseudomonas Aeruginosa RhlgNADP ACTIVE-Site Complex Length = 276

Iteration: 1
 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/257 (25%), Positives = 119/257 (46%), Gaps = 15/257 (5%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L G++A++TGG+ GIG+  A+   + GAR+ + A   +            G C  +  D
Sbjct: 26  SLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPAD 85
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++E   + L  +  +   +LDI+ +NAG  +S    +     S ++++  +NV  + +C
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAG--TSWGAALESYPVSGWEKVMQLNVTSVFSC 143
Query: 132 VKHAARVM-----VEGGVRGSIVCTASVAG-SCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
           ++    ++      E   R  ++   SVAG S  G++   Y  SK A+  L R  + +L 
Sbjct: 144 IQQLLPLLRRSASAENPAR--VINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELV 201
Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
              I VN ++P    + +T H    P A E +    P     G   R   +A   + LA 
Sbjct: 202 GEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM----GRWGRPEEMAALAISLAG 257
Query: 245 RDSEFVTGHDLVVDGGF 261
               ++TG+ + +DGGF
Sbjct: 258 TAGAYMTGNVIPIDGGF 274

>pdb|1YXM|A Chain A, Crystal Structure Of Peroxisomal Trans 2-Enoyl Coa Reductase Length = 303

Iteration: 1
 Score = 74.3 bits (181), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 119/259 (45%), Gaps = 21/259 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV-------IADIQDELGRQVATSIGVGKC 65
           L+G+VAI+TGGA+GIG+   +   + G+ +++       +    DEL   +  +    + 
Sbjct: 16  LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPT-KQARV 74
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAI 123
             + C++ NE +V  LV ST+  +G+++ + +N G   LS ++     +    +  +   
Sbjct: 75  IPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEH----ISSKGWHAVLET 130
Query: 124 NVRG-MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           N+ G    C    +  M E G  GSIV    V    G         ++  V  L +S ++
Sbjct: 131 NLTGTFYMCKAVYSSWMKEHG--GSIVNII-VPTKAGFPLAVHSGAARAGVYNLTKSLAL 187
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADE-VEKLFEPQTPLEGVVLRAGHVADAVLF 241
           +    GIR+NCV+P  + +      YG       E  F+ + P + + +    V+  V F
Sbjct: 188 EWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQ-KIPAKRIGVPE-EVSSVVCF 245
Query: 242 LACRDSEFVTGHDLVVDGG 260
           L    + F+TG  + VDGG
Sbjct: 246 LLSPAASFITGQSVDVDGG 264

>pdb|4GKB|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase Homolog (Target Efi- 505321) From Burkholderia Multivorans, Unliganded Structure Length = 258

Iteration: 1
 Score = 73.2 bits (178), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 116/257 (45%), Gaps = 17/257 (6%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L+ KV I+TGGASGIG   +   A+  A  +V A    +     A +    +  Y+  +
Sbjct: 4   NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVE 63
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAF----DRLFAINVRG 127
           + ++ Q +  V  T+  +G+LD + +NAG+   +D   LD    AF    +R   I+   
Sbjct: 64  LQDDAQCRDAVAQTIATFGRLDGLVNNAGV---NDGIGLDAGRDAFVASLERNL-IHYYA 119
Query: 128 MA-ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           MA  CV H          RG+IV  +S     G    + Y  SK A + L R  +V L  
Sbjct: 120 MAHYCVPHLK------ATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALRE 173
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLAC 244
           HG+RVN V P  + TPL  +      D   KL E   + PL         +AD  +FL  
Sbjct: 174 HGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLS 233
Query: 245 RDSEFVTGHDLVVDGGF 261
             +   TG  L VDGG+
Sbjct: 234 PRASHTTGEWLFVDGGY 250

>pdb|1IPE|A Chain A, Tropinone Reductase-Ii Complexed With Nadph Length = 259

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 19/262 (7%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYV 68
           +  LEG  A++TGG+ GIG       A  GA +   +  Q EL   +      G K    
Sbjct: 3   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 62
Query: 69  HCDVTNECQVKALVDSTVQNY-GQLDIMFSNAGIL---SSSDQTVLDLDFSAFDRLFAIN 124
            CD+++  + + L+++   ++ G+L+I+ +NAGI+    + D TV D     +  + +IN
Sbjct: 63  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-----YSLIMSIN 117
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
               A  +   A   ++   RG++V  +SV+G+        Y  +K A+  L R  + + 
Sbjct: 118 FEA-AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEW 176
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR----AGHVADAVL 240
               IRVN V P  +AT L      M   + E+       ++   LR       +A  V 
Sbjct: 177 AKDNIRVNGVGPGVIATSLV----EMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA 232
Query: 241 FLACRDSEFVTGHDLVVDGGFL 262
           FL    + +VTG  + VDGG +
Sbjct: 233 FLCFPAASYVTGQIIYVDGGLM 254

>pdb|2AE2|A Chain A, Tropinone Reductase-Ii Complexed With Nadp+ And Pseudotropine Length = 260

Iteration: 1
 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 119/262 (45%), Gaps = 19/262 (7%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYV 68
           +  LEG  A++TGG+ GIG       A  GA +   +  Q EL   +      G K    
Sbjct: 4   RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEAS 63
Query: 69  HCDVTNECQVKALVDSTVQNY-GQLDIMFSNAGIL---SSSDQTVLDLDFSAFDRLFAIN 124
            CD+++  + + L+++   ++ G+L+I+ +NAGI+    + D TV D     +  + +IN
Sbjct: 64  VCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVED-----YSLIMSIN 118
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
               A  +   A   ++   RG++V  +SV+G+        Y  +K A+  L R  + + 
Sbjct: 119 FEA-AYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEW 177
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR----AGHVADAVL 240
               IRVN V P  +AT L      M   + E+       ++   LR       +A  V 
Sbjct: 178 AKDNIRVNGVGPGVIATSLV----EMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVA 233
Query: 241 FLACRDSEFVTGHDLVVDGGFL 262
           FL    + +VTG  + VDGG +
Sbjct: 234 FLCFPAASYVTGQIIYVDGGLM 255

>pdb|4IBO|A Chain A, Crystal Structure Of A Putative Gluconate Dehydrogenase From Agrobacterium Tumefaciens (Target Efi-506446) Length = 271

Iteration: 1
 Score = 72.4 bits (176), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 114/254 (44%), Gaps = 13/254 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L G+ A++TG + G+G   A   A  GAR+++       + + V     VG     V  D
Sbjct: 24  LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD 83
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+E ++        +    +DI+ +NAGI     + +++L+ + + R+   N+      
Sbjct: 84  VTSESEIIEAFARLDEQGIDVDILVNNAGI--QFRKPMIELETADWQRVIDTNLTSAFMI 141
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + AA+ M+  G  G IV   S+           Y ++K  +  L R+ + +   +GI+ 
Sbjct: 142 GREAAKRMIPRGY-GKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQA 200
Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV---LFLACRDSE 248
           N + P  + T +       P  E +   + +TP +    R G   + V   +FL+   S+
Sbjct: 201 NAIGPGYMLTDMNQALIDNP--EFDAWVKARTPAK----RWGKPQELVGTAVFLSASASD 254
Query: 249 FVTGHDLVVDGGFL 262
           +V G  + VDGG L
Sbjct: 255 YVNGQIIYVDGGML 268

>pdb|2GDZ|A Chain A, Crystal Structure Of 15-Hydroxyprostaglandin Dehydrogenase Type1, Complexed With Nad+ Length = 267

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 19/192 (9%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHYV 68
           + GKVA++TG A GIG   A      GA+ + + D   E G Q   ++       K  ++
Sbjct: 5   VNGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFI 63
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDV ++ Q++      V ++G+LDI+ +NAG+ +  +          +++   IN+  +
Sbjct: 64  QCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN----------WEKTLQINLVSV 113
Query: 129 AACVKHAARVMVE--GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV--QL 184
            +        M +  GG  G I+  +S+AG     ++  Y  SKH ++G  RSA++   L
Sbjct: 114 ISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANL 173
Query: 185 GVHGIRVNCVSP 196
              G+R+N + P
Sbjct: 174 MNSGVRLNAICP 185

>pdb|3RKR|A Chain A, Crystal Structure Of A Metagenomic Short-Chain Oxidoreductase (Sdr) In Complex With Nadp Length = 262

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHY 67
           + L G+VA++TG + GIG   AR     GAR+++ A   ++L    R++  + G  + H 
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
             CD+++   + A     +  +G+ D++ +NAG+       +  +  + +D L A+N++ 
Sbjct: 85  --CDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV-GWFGGPLHTMKPAEWDALIAVNLKA 141
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               ++  A  M+    RG I+  +S+AG         Y  SK  + GL+ SA+ +L  H
Sbjct: 142 PYLLLRAFAPAMI-AAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQH 200
Query: 188 GIRVNCVSPHGLAT 201
            +RV+ V+P  + T
Sbjct: 201 QVRVSLVAPGSVRT 214

>pdb|2NTN|A Chain A, Crystal Structure Of Maba-c60v/g139a/s144l Length = 267

Iteration: 1
 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/266 (26%), Positives = 117/266 (43%), Gaps = 28/266 (10%)
Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M  ++   AK     +  ++TGG  GIG   A+  A  G ++ V                
Sbjct: 21  MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV-----------THRGS 69
Query: 61  GVGKCHY-VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
           G  K  + V  DVT+   V     +  ++ G ++++ SNAG+  S+D  ++ +    F++
Sbjct: 70  GAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEK 127
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           +   N+ G     + A+R M      G ++  ASV+G  G   + +Y  SK  VIG+ RS
Sbjct: 128 VINANLTGAFRVAQRASRSMQRNKF-GRMIFIASVSGLWGIGNQANYAASKAGVIGMARS 186
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ----TPLEGVVLRAGHV 235
            + +L    +  N V+P  + T +T  A      +    F P     TP E        V
Sbjct: 187 IARELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPAKRVGTPAE--------V 237
Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGF 261
           A  V FLA  D+ +++G  + VDGG 
Sbjct: 238 AGVVSFLASEDASYISGAVIPVDGGM 263

>pdb|3RKU|A Chain A, Substrate Fingerprint And The Structure Of Nadp+ Dependent Serine Dehydrogenase From Saccharomyces Cerevisiae Complexed With Nadp+ Length = 287

Iteration: 1
 Score = 72.0 bits (175), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 111/254 (43%), Gaps = 13/254 (5%)
Query: 9   AKNKLEGKVAIITGGASGIGETTA--RLFADHGARMIVIA----DIQDELGRQVATSIGV 62
           A  +L  K  +ITG ++GIG+ TA   L A +G   +++A    +  +EL + +      
Sbjct: 27  AAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPN 86
Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
            K H    D+T   ++K  +++  Q +  +DI+ +NAG    SD+ V  +       +F 
Sbjct: 87  AKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSDR-VGQIATEDIQDVFD 145
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
            NV  +   +  A   + +    G IV   S+AG       + Y  SK AV     S   
Sbjct: 146 TNVTAL-INITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRK 204
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           +L    IRV  ++P  + T  +   Y    ++ + +++  TP     L A  VAD +++ 
Sbjct: 205 ELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP-----LMADDVADLIVYA 259
Query: 243 ACRDSEFVTGHDLV 256
             R    V    L+
Sbjct: 260 TSRKQNTVIADTLI 273

>pdb|3LYL|A Chain A, Structure Of 3-Oxoacyl-Acylcarrier Protein Reductase, Fabg From Francisella Tularensis Length = 247

Iteration: 1
 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 113/258 (43%), Gaps = 27/258 (10%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCD 71
           L  KVA++TG + GIG   A   A  GA ++  A  Q    +   +    G K   +  +
Sbjct: 3   LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSXKEKGFKARGLVLN 62
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGIL-------SSSD--QTVLDLDFSAFDRLFA 122
           +++   ++            +DI+ +NAGI         S D  Q+V++ + S+      
Sbjct: 63  ISDIESIQNFFAEIKAENLAIDILVNNAGITRDNLXXRXSEDEWQSVINTNLSSI----- 117
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
              R    CV+   +        G I+   SV GS G   +T+Y  +K  VIG  +S + 
Sbjct: 118 --FRXSKECVRGXXKKR-----WGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAY 170
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           ++    I VN V+P  +AT  T        DE +     + P  G +     +A AV FL
Sbjct: 171 EVASRNITVNVVAPGFIATDXTDKL----TDEQKSFIATKIP-SGQIGEPKDIAAAVAFL 225
Query: 243 ACRDSEFVTGHDLVVDGG 260
           A  +++++TG  L V+GG
Sbjct: 226 ASEEAKYITGQTLHVNGG 243

>pdb|1MXF|A Chain A, Crystal Structure Of Inhibitor Complex Of Putative Pteridine Reductase 2 (Ptr2) From Trypanosoma Cruzi Length = 276

Iteration: 1
 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 36/275 (13%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGKC 65
           E   A+ITGGA  IG + A      G R++V           +  EL    A S  + K 
Sbjct: 10  ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKG 69
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI-----LSSSDQTVLDLDFSAFD-- 118
                    +C  + ++D + + +G+ D++ +NA       L   D T    D    D  
Sbjct: 70  DLSLSSSLLDC-CEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQ 128
Query: 119 --RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD--------YHM 168
              LF  N       ++  AR   EGG   S     SV   C     TD        Y  
Sbjct: 129 VAELFGSNAVAPLFLIRAFARRQGEGGAWRSR--NLSVVNLCDAX--TDLPLPGFCVYTX 184
Query: 169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV 228
           +KHA+ GL R+A+++L    IRVN V+P      L+      P  E ++ +  + PL   
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVAPG-----LSLLPPAXP-QETQEEYRRKVPLGQS 238
Query: 229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
              A  +ADA+ FL  +D+ ++TG  L VDGG ++
Sbjct: 239 EASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>pdb|3UF0|A Chain A, Crystal Structure Of A Putative Nad(P) Dependent Gluconate 5- Dehydrogenase From Beutenbergia Cavernae(Efi Target Efi-502044) With Bound Nadp (Low Occupancy) Length = 273

Iteration: 1
 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 119/259 (45%), Gaps = 23/259 (8%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIV------IADIQDELGRQVATSIGVGKC 65
            L G+ A++TG  SGIG   A  +A  GA ++       + ++ DE+      + G G  
Sbjct: 28  SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEI------ADGGGSA 81
Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
             V  D+  + +  A V   +    ++D++ +NAGI++ +     ++    +  +  +N+
Sbjct: 82  EAVVADLA-DLEGAANVAEELAATRRVDVLVNNAGIIARAPAE--EVSLGRWREVLTVNL 138
Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
                  +     M+  G  G IV  AS+    GG+    Y  SKHAV+GL R+ + +  
Sbjct: 139 DAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWA 197
Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLA 243
             G+ VN ++P  +   +T +   + AD+ E+  E   + P          V  AV FLA
Sbjct: 198 GRGVGVNALAPGYV---VTANTAALRADD-ERAAEITARIPAGRWATPEDMVGPAV-FLA 252
Query: 244 CRDSEFVTGHDLVVDGGFL 262
              + +V G  L VDGG+L
Sbjct: 253 SDAASYVHGQVLAVDGGWL 271

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 70.9 bits (172), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 118/263 (44%), Gaps = 26/263 (9%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSIGVGKCHYVH 69
           L  KV +I+G    +G T AR  A+ GA +++ A   + L    +QV T  G  +   V 
Sbjct: 9   LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQV-TDTGR-RALSVG 66
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+T++ QV  LVD T++ YG++D++ +NA     S +   +  F        + V G  
Sbjct: 67  TDITDDAQVAHLVDETMKAYGRVDVVINNA-FRVPSMKPFANTTFEHMRDAIELTVFGAL 125
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             ++     + E   +G++V   S+       +   Y M+K A++ + ++ + +LG  GI
Sbjct: 126 RLIQGFTPALEES--KGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGI 183
Query: 190 RVNCVSP----HGLATPLTCHAYGMPADEVEKLFE--------PQTPLEGVVLRAGHVAD 237
           RVN V P     G       H  G     VE ++          + P E        VA 
Sbjct: 184 RVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKRLPTE------DEVAS 237
Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
           A+LF+A   +  +TG  L V+ G
Sbjct: 238 AILFMASDLASGITGQALDVNCG 260

>pdb|3TL3|A Chain A, Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Ulcerans Length = 257

Iteration: 1
 Score = 70.5 bits (171), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 100/203 (49%), Gaps = 19/203 (9%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           ++   VA++TGGASG+G  T +   D GA+++V+ DI+   G  V   +G  +  +   D
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVL-DIR---GEDVVADLG-DRARFAAAD 60
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLD----FSAFDRLFAINVRG 127
           VT+E  V + +D   +  G L I+ + AG  + +   VL  D     +AF ++  IN+ G
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAG--TGNAIRVLSRDGVFSLAAFRKIVDINLVG 117
Query: 128 MAACVKHAARVMVE-------GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
               ++ AA  + +          RG I+ TASVA   G   +  Y  SK  V+G+    
Sbjct: 118 SFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPI 177
Query: 181 SVQLGVHGIRVNCVSPHGLATPL 203
           +  L  H IRV  ++P    TPL
Sbjct: 178 ARDLASHRIRVMTIAPGLFDTPL 200

>pdb|1X1E|A Chain A, Crystal Structure Of Tt0495 Protein From Thermus Thermophilus Hb8 Length = 239

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           + A++TGG+ GIG   A      G R + IA    E   + A S+G      +  D+  +
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYR-VAIASRNPE---EAAQSLGAVP---LPTDLEKD 55
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
              K LV   ++  G L ++   A +  +  +  L+L +  + R+  +++       + A
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAV--NVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112
Query: 136 ARVMVEGGVRGSIVCTASVAG-SCGGKRRTD-YHMSKHAVIGLVRSASVQLGVHGIRVNC 193
           A  M E G  G ++   SV   + GG      Y  +K A++GL R+ + +    GIRVN 
Sbjct: 113 APHMAEAGW-GRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171
Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQT---PLEGVVLRAGHVADAVLFLACRDSEFV 250
           + P  + T  T     +P  +  +L+EP T   P+ G   R   +A     L   ++E++
Sbjct: 172 LCPGYVETEFT-----LPLRQNPELYEPITARIPM-GRWARPEEIARVAAVLCGDEAEYL 225
Query: 251 TGHDLVVDGGFL 262
           TG  + VDGGFL
Sbjct: 226 TGQAVAVDGGFL 237

>pdb|1UZM|A Chain A, Maba From Mycobacterium Tuberculosis Length = 247

Iteration: 1
 Score = 70.1 bits (170), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/266 (26%), Positives = 116/266 (43%), Gaps = 28/266 (10%)
Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M  ++   AK     +  ++TGG  GIG   A+  A  G ++ V                
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAV-----------THRGS 49
Query: 61  GVGKCHY-VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
           G  K  + V  DVT+   V     +  ++ G ++++ SNAG+  S+D  ++ +    F++
Sbjct: 50  GAPKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEK 107
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           +   N+ G     + A+R M      G ++   SV+G  G   + +Y  SK  VIG+ RS
Sbjct: 108 VINANLTGAFRVAQRASRSMQRNKF-GRMIFIGSVSGLWGIGNQANYAASKAGVIGMARS 166
Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ----TPLEGVVLRAGHV 235
            + +L    +  N V+P  + T +T  A      +    F P     TP E        V
Sbjct: 167 IARELSKANVTANVVAPGYIDTDMT-RALDERIQQGALQFIPAKRVGTPAE--------V 217
Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGF 261
           A  V FLA  D+ +++G  + VDGG 
Sbjct: 218 AGVVSFLASEDASYISGAVIPVDGGM 243

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 61  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 125 V------RGMAACVKHAARVMVEGGVRG-------SIV--CTASVAGSCGGKRRTDYHMS 169
           V        +A  +   +    + G          SIV  C A V   C     + Y+M 
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA--FSLYNMG 177
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 178 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 231
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 263

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 81  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 125 V------RGMAACVKHAARVMVEGGVRG-------SIV--CTASVAGSCGGKRRTDYHMS 169
           V        +A  +   +    + G          SIV  C A V   C     + Y+M 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA--FSLYNMG 197
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 198 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 251
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283

>pdb|2JAP|A Chain A, Clavulanic Acid Dehydrogenase: Structural And Biochemical Analysis Of The Final Step In The Biosynthesis Of The Beta- Lactamase Inhibitor Clavulanic Acid Length = 247

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 9/197 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---LGRQVATSIGVGKCHYVH 69
           L+GKVA+ITG +SGIGE TAR  A  GA + + A   ++   LG ++ T+ G  K H + 
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL-TAAG-AKVHVLE 62
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV +   V A V STV+  G LDI+ +NAGI+      V D D + + R+   N+ G+ 
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLGP--VEDADTTDWTRMIDTNLLGLM 120
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A   ++    +G++V  +S+AG    +    Y  +K  V     +   ++   G+
Sbjct: 121 YMTRAALPHLLRS--KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 190 RVNCVSPHGLATPLTCH 206
           RV  + P    T L  H
Sbjct: 179 RVVVIEPGTTDTELRGH 195

>pdb|4G81|D Chain D, Crystal Structure Of A Hexonate Dehydrogenase Ortholog (Target Efi- 506402 From Salmonella Enterica, Unliganded Structure Length = 255

Iteration: 1
 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 14/255 (5%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVG-KCHYVHC 70
           L GK A++TG A G+G   A   A  GAR +++ DI+   L   V T    G   H V  
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGAR-VILNDIRATLLAESVDTLTRKGYDAHGVAF 65
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+E  ++A           +DI+ +NAGI     + +++L+   + ++   N+     
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGI--QYRKPMVELELENWQKVIDTNLTSAFL 123
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + AA+ M+     G I+   S+           Y  +K  +  L  S + +     I+
Sbjct: 124 VSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQ 183
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV---LFLACRDS 247
            N + P  + T +      +   + +   +  TP +    R G   + +   +FL+ + S
Sbjct: 184 TNAIGPGYILTDMNTAL--IEDKQFDSWVKSSTPSQ----RWGRPEELIGTAIFLSSKAS 237
Query: 248 EFVTGHDLVVDGGFL 262
           +++ G  + VDGG+L
Sbjct: 238 DYINGQIIYVDGGWL 252

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 68.9 bits (167), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 60
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 61  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 125 V------RGMAACVKHAARVMVEGGVRG-------SIV--CTASVAGSCGGKRRTDYHMS 169
           V        +A  +   +    + G          SIV  C A V   C     + Y+M 
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA--FSLYNMG 177
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 178 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 231
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 263

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 68.6 bits (166), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 67/272 (24%), Positives = 122/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 81  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 125 V------RGMAACVKHAARVMVEGGVRG-------SIV--CTASVAGSCGGKRRTDYHMS 169
           V        +A  +   +    + G          SIV  C A V   C     + Y+M 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMA--FSLYNMG 197
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 198 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 251
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 68.2 bits (165), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 1   MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 60
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 61  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 119
Query: 125 V------RGMAACVKHAARVMVEGGVRGSIVCTAS---VAGSCGGKRRTD------YHMS 169
           V        +A  +   +    + G   +  CT+S   +   C             Y+M 
Sbjct: 120 VAELIGTNAIAPFLLTMSFAQRQKGTNPN--CTSSNLSIVNLCDAMVDQPXMAFSLYNMG 177
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 178 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 231
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 232 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 263

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVXQ 80
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 81  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 125 V------RGMAACVKHAARVMVEGGVRGSIVCTAS---VAGSCGGKRRTD------YHMS 169
           V        +A  +   +    + G   +  CT+S   +   C             Y+M 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPN--CTSSNLSIVNLCDAMVDQPXMAFSLYNMG 197
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 198 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 251
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283

>pdb|3SJU|A Chain A, Hedamycin Polyketide Ketoreductase Bound To Nadph Length = 279

Iteration: 1
 Score = 67.8 bits (164), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 111/260 (42%), Gaps = 22/260 (8%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV---HCDV 72
           + A +TG +SGIG   AR  A  G  + V    +D      A        H V    CDV
Sbjct: 25  QTAFVTGVSSGIGLAVARTLAARG--IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDV 82
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+  +V A V + V+ +G + I+ ++AG   +      DLD + +  +   N+ G+    
Sbjct: 83  TSTDEVHAAVAAAVERFGPIGILVNSAG--RNGGGETADLDDALWADVLDTNLTGVFRVT 140
Query: 133 KHAARVMVEGGVR----GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           +    V+  GG+R    G IV  AS  G  G      Y  SKH V+G  +S   +L   G
Sbjct: 141 RE---VLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197
Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           I VN V P  + TP+           +G+   EV + F  + PL G       VA  V +
Sbjct: 198 ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPEEVAGLVGY 256
Query: 242 LACRDSEFVTGHDLVVDGGF 261
           L    +  +T   L V GG 
Sbjct: 257 LVTDAAASITAQALNVCGGL 276

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 67.4 bits (163), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 32/272 (11%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV--------IADIQDELGRQVATSIGVGK 64
           +E   A++TG A  IG   A      G R+++           + DEL ++ + +  V +
Sbjct: 21  MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQ 80
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
               + +V      + +++S  + +G+ D++ +NA     +     D + ++  +     
Sbjct: 81  ADLTNSNVL-PASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQ 139
Query: 125 V------RGMAACVKHAARVMVEGGVRGSIVCTAS---VAGSCGGKRRTD------YHMS 169
           V        +A  +   +    + G   +  CT+S   +   C             Y+M 
Sbjct: 140 VAELIGTNAIAPFLLTMSFAQRQKGTNPN--CTSSNLSIVNLCDAMVDQPXMAFSLYNMG 197
Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K +  + PL    
Sbjct: 198 KHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-----AMGEEEKDK-WRRKVPLGRRE 251
Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             A  +ADAV+FL    ++++TG  + VDGG 
Sbjct: 252 ASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283

>pdb|3G1T|A Chain A, Crystal Structure Of Short Chain Dehydrogenase From Salmonella Enterica Subsp. Enterica Serovar Typhi Str. Ct18 Length = 258

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 104/219 (47%), Gaps = 14/219 (6%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGK---CH 66
           ++ L+ ++ ++TG + GIG   A  +A +GA +I++   +++L R+VA  I   +     
Sbjct: 9   QDLLQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKL-RRVAQHIADEQHVQPQ 67
Query: 67  YVHCDV----TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
           +   D+      EC  + + D    +Y +LD +  NAG+L      + + D   +  +  
Sbjct: 68  WFTLDLLTCTAEEC--RQVADRIAAHYPRLDGVLHNAGLLGEIG-PMSEQDPQIWQDVMQ 124
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           +NV      +  A   ++     GS+V T+S  G  G      Y  SK A  G+++  + 
Sbjct: 125 VNVNA-TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYATSKFATEGMMQVLAD 183
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
           +     +RVNC++P G  T +   A+  P ++ +KL  P
Sbjct: 184 EYQNRSLRVNCINPGGTRTSMRASAF--PTEDPQKLKTP 220

>pdb|2JAH|A Chain A, Biochemical And Structural Analysis Of The Clavulanic Acid Dehydeogenase (Cad) From Streptomyces Clavuligerus Length = 247

Iteration: 1
 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 98/197 (49%), Gaps = 9/197 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---LGRQVATSIGVGKCHYVH 69
           L+GKVA+ITG +SGIGE TAR  A  GA + + A   ++   LG ++ T+ G  K H + 
Sbjct: 5   LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDEL-TAAG-AKVHVLE 62
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV +   V A V STV+  G LDI+ +NAGI       V D D + + R    N+ G+ 
Sbjct: 63  LDVADRQGVDAAVASTVEALGGLDILVNNAGIXLLGP--VEDADTTDWTRXIDTNLLGLX 120
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A   ++    +G++V  +S+AG    +    Y  +K  V     +   ++   G+
Sbjct: 121 YXTRAALPHLLRS--KGTVVQXSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGV 178
Query: 190 RVNCVSPHGLATPLTCH 206
           RV  + P    T L  H
Sbjct: 179 RVVVIEPGTTDTELRGH 195

>pdb|1O5I|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Reductase (Tm1169) From Thermotoga Maritima At 2.50 A Resolution Length = 249

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 107/245 (43%), Gaps = 25/245 (10%)
Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           ++   + GIG   A + +  GA + + A  ++ L R            YV CD+  +   
Sbjct: 23  LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR--------SGHRYVVCDLRKD--- 71
Query: 79  KALVDSTVQNYGQLDIMFSNAG-ILSSSDQTVLDLDFS-AFDRLFAINVRGMAACVKHAA 136
              +D   +   ++DI+  NAG   +     + + DF  A D LF      M   V++  
Sbjct: 72  ---LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFL----NMIKIVRNYL 124
Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
             M E G  G IV   S +     +     + ++ A+ G +++ S ++  +GI VNCV+P
Sbjct: 125 PAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAP 183
Query: 197 HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV 256
               T        + ++E +K  E Q P+  +  +   +A  V FL    + ++TG  +V
Sbjct: 184 GWTETE---RVKELLSEEKKKQVESQIPMRRMA-KPEEIASVVAFLCSEKASYLTGQTIV 239
Query: 257 VDGGF 261
           VDGG 
Sbjct: 240 VDGGL 244

>pdb|2FWM|X Chain X, Crystal Structure Of E. Coli Enta, A 2,3-Dihydrodihydroxy Benzoate Dehydrogenase Length = 250

Iteration: 1
 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 110/257 (42%), Gaps = 25/257 (9%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
             GK   +TG   GIG  TA  F + GA++        +     AT +          DV
Sbjct: 5   FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFATEV---------MDV 55
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGIL--SSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            +  QV  +    +    +LD + + AGIL   ++DQ    L    + + FA+NV G   
Sbjct: 56  ADAAQVAQVCQRLLAETERLDALVNAAGILRMGATDQ----LSKEDWQQTFAVNVGGAFN 111
Query: 131 CVKHAA-RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +    +   + G  G+IV  AS A        + Y  SK A+  L  S  ++L   G+
Sbjct: 112 LFQQTMNQFRRQRG--GAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGV 169
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKL------FEPQTPLEGVVLRAGHVADAVLFLA 243
           R N VSP    T +    +     E +++      F+   PL G + R   +A+ +LFLA
Sbjct: 170 RCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLA 228
Query: 244 CRDSEFVTGHDLVVDGG 260
              +  +T  D+VVDGG
Sbjct: 229 SDLASHITLQDIVVDGG 245

>pdb|3PXX|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nicotinamide Adenine Dinucleotide Length = 287

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 119/289 (41%), Gaps = 45/289 (15%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQ------------DELGRQV 56
           +++ KV ++TGGA G G + A   A+ GA +I+     DI+            +E G +V
Sbjct: 7   RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEV 66
Query: 57  ATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
             +    K +    DV +   V   + + V  +G+LD++ +NAGI          L   A
Sbjct: 67  EKT--GRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAH----LPVQA 120
Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG-----------SCGGKRRTD 165
           F   F ++  G+   V HAA   +  G   SI+ T SVAG              G     
Sbjct: 121 FADAFDVDFVGVINTV-HAALPYLTSG--ASIITTGSVAGLIAAAQPPGAGGPQGPGGAG 177
Query: 166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA--YGMPADEVEK------ 217
           Y  +K  V       + QL    IR N + P  + T +   A  Y     ++E       
Sbjct: 178 YSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRADA 237
Query: 218 --LFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
              F     +    + A  +++AV FLA  +S +VTG    VD G +++
Sbjct: 238 LLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286

>pdb|1H5Q|A Chain A, Mannitol Dehydrogenase From Agaricus Bisporus Length = 265

Iteration: 1
 Score = 65.5 bits (158), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 113/258 (43%), Gaps = 18/258 (6%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVI---ADIQDELGRQVATSIGVGKCHYVHCDV 72
           K  I+TGG  GIG    R  A  GA + VI   A    E+  +V    GV K     CDV
Sbjct: 15  KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGV-KTKAYQCDV 73
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           +N   V   +     + G +  + +NAG+  S  +   +L    F  ++ +NV G+    
Sbjct: 74  SNTDIVTKTIQQIDADLGPISGLIANAGV--SVVKPATELTHEDFAFVYDVNVFGVFNTC 131
Query: 133 KHAARVMVEGGVRGSIVCTASVAGSC-------GGKRRTDYHMSKHAVIGLVRSASVQLG 185
           +  A++ ++   +GSIV T+S++          G   +  Y+ SK A   LV+  + +  
Sbjct: 132 RAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA 191
Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             GIRVN +SP  + T  T H       ++        PL            A+L L+  
Sbjct: 192 SAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIPLNRFAQPEEMTGQAILLLS-D 246
Query: 246 DSEFVTGHDLVVDGGFLI 263
            + ++TG +  +DGG LI
Sbjct: 247 HATYMTGGEYFIDGGQLI 264

>pdb|3KSU|A Chain A, Crystal Structure Of Short-Chain Dehydrogenase From Oenococcus Oeni Psu-1 Length = 262

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/262 (23%), Positives = 110/262 (41%), Gaps = 26/262 (9%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIV----------IADIQDELGRQVATSIGV 62
           L+ KV +I GG   +G  TA+ FA     +++             ++DEL  Q A     
Sbjct: 9   LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGA----- 63
Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
            K      D++NE +V  L D   + +G++DI  +  G +    + +++   + FD +  
Sbjct: 64  -KVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLK--KPIVETSEAEFDAMDT 120
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           IN +     +K AA+ M      G I+  A+   +      + Y  +K  V    R+AS 
Sbjct: 121 INNKVAYFFIKQAAKHM---NPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASK 177
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           +L    I VN ++P  + T      YG    E     + Q  +   + +   +A  + FL
Sbjct: 178 ELMKQQISVNAIAPGPMDTSF---FYGQETKESTAFHKSQA-MGNQLTKIEDIAPIIKFL 233
Query: 243 ACRDSEFVTGHDLVVDGGFLIR 264
              D  ++ G  +  +GG+  R
Sbjct: 234 TT-DGWWINGQTIFANGGYTTR 254

>pdb|3F5S|A Chain A, Crystal Structure Of Putatitve Short Chain Dehydrogenase From Shigella Flexneri 2a Str. 301 Length = 255

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 23/227 (10%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-- 63
           M   ++ L  ++ ++TG + GIG   A  +A +GA +I++   +++L RQVA+ I     
Sbjct: 1   MSLKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL-RQVASHINEETG 59
Query: 64  -KCHYVHCDV----TNECQVKALVDSTVQNYGQLDIMFSNAGILSS----SDQTVLDLDF 114
            +  +   D+    +  CQ   L    V NY +LD +  NAG+L      S+Q     + 
Sbjct: 60  RQPQWFILDLLTCTSENCQ--QLAQRIVVNYPRLDGVLHNAGLLGDVCPMSEQ-----NP 112
Query: 115 SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
             +  +  INV      +  A   ++     GS+V T+S  G  G      Y  SK A  
Sbjct: 113 QVWQDVMQINVNA-TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATE 171
Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
           G+++  + +     +RVNC++P G  T +   A+  P ++ +KL  P
Sbjct: 172 GMMQVLADEYQ-QRLRVNCINPGGTRTAMRASAF--PTEDPQKLKTP 215

>pdb|3F5Q|A Chain A, Crystal Structure Of Putative Short Chain Dehydrogenase From Escherichia Coli Cft073 Length = 262

Iteration: 1
 Score = 65.1 bits (157), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 105/223 (47%), Gaps = 23/223 (10%)
Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG---KCH 66
           ++ L  ++ ++TG + GIG   A  +A +GA +I++   +++L RQVA+ I      +  
Sbjct: 9   QDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL-RQVASHINEETGRQPQ 67
Query: 67  YVHCDV----TNECQVKALVDSTVQNYGQLDIMFSNAGILSS----SDQTVLDLDFSAFD 118
           +   D+    + +CQ   L      NY +LD +  NAG+L      S+Q     D   + 
Sbjct: 68  WFILDLLTCTSEDCQ--QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQ-----DPQVWQ 120
Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
            +  +NV      +  A   ++     GS+V T+S  G  G      Y  SK A  G+++
Sbjct: 121 DVMQVNVNA-TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQ 179
Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
             + +     +RVNC++P G  T +   A+  P ++ +KL  P
Sbjct: 180 VLADEYQ-QRLRVNCINPGGTRTAMRASAF--PTEDPQKLKTP 219

>pdb|3OML|A Chain A, Structure Of Full-Length Peroxisomal Multifunctional Enzyme Type 2 From Drosophila Melanogaster Length = 613

Iteration: 1
 Score = 64.7 bits (156), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--------RQVATS 59
           + K + +G+VA++TG  +G+G   A LFA+ GA+++V     ++LG         Q A  
Sbjct: 12  DGKLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVV-----NDLGGTHSGDGASQRAAD 66
Query: 60  IGVGKCHYVH----CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFS 115
           I V +          D  +      ++++ ++ +G++DI+ +NAGIL   D++++     
Sbjct: 67  IVVDEIRKAGGEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGIL--RDRSLVKTSEQ 124
Query: 116 AFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            ++ +  ++++G   C + A   M +    G I+ T+S +G  G   + +Y  +K  +IG
Sbjct: 125 DWNLVNDVHLKGSFKCTQAAFPYMKKQNY-GRIIMTSSNSGIYGNFGQVNYTAAKMGLIG 183
Query: 176 LVRSASVQLGVHGIRVNCVSP 196
           L  + +++   + +  N + P
Sbjct: 184 LANTVAIEGARNNVLCNVIVP 204

>pdb|3ICC|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl Carrier Protein) Reductase From Bacillus Anthracis At 1.87 A Resolution Length = 255

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 113/262 (43%), Gaps = 20/262 (7%)
Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCH 66
           A + L+GKVA++TG + GIG   A+  A+ GA + +    + E   +    I    G   
Sbjct: 1   ANSXLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60
Query: 67  YVHCDVTNECQVKAL---VDSTVQNY---GQLDIMFSNAGILSSS--DQTVLDLDFSAFD 118
            +  ++ +   V+AL   +D+ +QN     + DI+ +NAGI   +  ++T        FD
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQF----FD 116
Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           R  ++N +     ++ A   + +      I+  +S A          Y  +K A+     
Sbjct: 117 RXVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFIAYSXTKGAINTXTF 173
Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA 238
           + + QLG  GI VN + P  + T        + +D   K +         +     +AD 
Sbjct: 174 TLAKQLGARGITVNAILPGFVKTDXNAE---LLSDPXXKQYATTISAFNRLGEVEDIADT 230
Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
             FLA  DS +VTG  + V GG
Sbjct: 231 AAFLASPDSRWVTGQLIDVSGG 252

>pdb|2QQ5|A Chain A, Crystal Structure Of Human Sdr Family Member 1 Length = 260

Iteration: 1
 Score = 63.9 bits (154), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 94/191 (49%), Gaps = 13/191 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVHC 70
           + G+V ++TG + GIG   A      GA + +     D L    Q A S+G G+C  V C
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLG-GQCVPVVC 61
Query: 71  DVTNECQVKALVDST-VQNYGQLDIMFSNA-----GILSSSDQTVLDLDFSAFDRLFAIN 124
           D + E +V++L +    +  G+LD++ +NA      IL++ ++   +   S +D +  + 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           +RG   C  + AR+MV  G +G IV  +S  GS        Y + K A   L    + +L
Sbjct: 122 LRGHYFCSVYGARLMVPAG-QGLIVVISS-PGSLQYMFNVPYGVGKAACDKLAADCAHEL 179
Query: 185 GVHGIRVNCVS 195
             HG  V+CVS
Sbjct: 180 RRHG--VSCVS 188

>pdb|1ZBQ|A Chain A, Crystal Structure Of Human 17-beta-hydroxysteroid Dehydrogenase Type 4 In Complex With Nad Length = 327

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 119/251 (47%), Gaps = 42/251 (16%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           + +G+V ++TG  +G+G   A  FA+ GA ++V+ D+  +         GVGK       
Sbjct: 27  RFDGRVVLVTGAGAGLGRAYALAFAERGA-LVVVNDLGGDFK-------GVGKGSLAADK 78
Query: 72  VTNECQVKA---------------LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
           V  E + +                +V + +  +G++D++ +NAGIL   D++   +    
Sbjct: 79  VVEEIRRRGGKAVANYDSVEEGEKVVKTALDAFGRIDVVVNNAGIL--RDRSFARISDED 136
Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           +D +  +++RG +  V  AA   ++    G I+ T+S +G  G   + +Y  +K  ++GL
Sbjct: 137 WDIIHRVHLRG-SFQVTRAAWEHMKKQKYGRIIMTSSASGIYGNFGQANYSAAKLGLLGL 195
Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA 236
             S +++     I  N ++P+   + +T     MP D VE L +P+           +VA
Sbjct: 196 ANSLAIEGRKSNIHCNTIAPNA-GSRMTQTV--MPEDLVEAL-KPE-----------YVA 240
Query: 237 DAVLFLACRDS 247
             VL+L C +S
Sbjct: 241 PLVLWL-CHES 250

>pdb|3P19|A Chain A, Improved Nadph-Dependent Blue Fluorescent Protein Length = 266

Iteration: 1
 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/228 (24%), Positives = 106/228 (46%), Gaps = 15/228 (6%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           K+ +ITG +SGIGE  AR F++ G  ++++A   + L      ++ +        DVT++
Sbjct: 17  KLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KALNLPNTLCAQVDVTDK 71
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
                 +    + YG  D + +NAG++      +   + + + R+F +NV G+   ++  
Sbjct: 72  YTFDTAITRAEKIYGPADAIVNNAGMMLLGQ--IDTQEANEWQRMFDVNVLGLLNGMQA- 128
Query: 136 ARVMVEGGVR--GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
             V+     R  G+I+  +S+AG         Y  +K AV  +  +   ++    +RV  
Sbjct: 129 --VLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMT 186
Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           ++P  + T L  H     + +++  ++      G VL A  VA AVLF
Sbjct: 187 IAPSAVKTELLSHTT---SQQIKDGYDAWRVDMGGVLAADDVARAVLF 231

>pdb|3F1L|A Chain A, The 0.95 A Structure Of An Oxidoreductase, Ycik From E.Coli Length = 252

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 23/220 (10%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG---KCHYVH 69
           L  ++ ++TG + GIG   A  +A +GA +I++   +++L RQVA+ I      +  +  
Sbjct: 10  LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKL-RQVASHINEETGRQPQWFI 68
Query: 70  CDV----TNECQVKALVDSTVQNYGQLDIMFSNAGILSS----SDQTVLDLDFSAFDRLF 121
            D+    +  CQ   L      NY +LD +  NAG+L      S+Q     +   +  + 
Sbjct: 69  LDLLTCTSENCQ--QLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQ-----NPQVWQDVM 121
Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            +NV      +  A   ++     GS+V T+S  G  G      Y  SK A  G+++  +
Sbjct: 122 QVNVNA-TFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLA 180
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
            +     +RVNC++P G  T +   A+  P ++ +KL  P
Sbjct: 181 DEYQ-QRLRVNCINPGGTRTAMRASAF--PTEDPQKLKTP 217

>pdb|3UN1|A Chain A, Crystal Structure Of An Oxidoreductase From Sinorhizobium Meliloti 1021 Length = 260

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 110/252 (43%), Gaps = 33/252 (13%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           KV +ITG + GIG    R + D   R++  +       R +  S      H V  D++  
Sbjct: 29  KVVVITGASQGIGAGLVRAYRDRNYRVVATS-------RSIKPSADP-DIHTVAGDISKP 80
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
                +V   ++ +G++D + +NAG+  +  +  ++     +D    +NV G     + A
Sbjct: 81  ETADRIVREGIERFGRIDSLVNNAGVFLA--KPFVEXTQEDYDHNLGVNVAGFFHITQRA 138
Query: 136 ARVMVEGGVRGSIV--CTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
           A   ++ G  G IV   T+ V     G       ++K  +  + RS + +    G+RVN 
Sbjct: 139 AAEXLKQG-SGHIVSITTSLVDQPXVGXPSALASLTKGGLNAVTRSLAXEFSRSGVRVNA 197
Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV--VLRAGH---VADAVLFLACRDSE 248
           VSP  + TP        PA       E  + L G+  V R G    V DAVL+L    + 
Sbjct: 198 VSPGVIKTPX------HPA-------ETHSTLAGLHPVGRXGEIRDVVDAVLYL--EHAG 242
Query: 249 FVTGHDLVVDGG 260
           F+TG  L VDGG
Sbjct: 243 FITGEILHVDGG 254

>pdb|3IMF|A Chain A, 1.99 Angstrom Resolution Crystal Structure Of A Short Chain Dehydrogenase From Bacillus Anthracis Str. 'ames Ancestor' Length = 257

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 117/254 (46%), Gaps = 10/254 (3%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR-QVATSIGVGKCHYVH 69
           N  + KV IITGG+SG G+  A  FA  GAR+++    +++L   ++      G+   V 
Sbjct: 2   NAXKEKVVIITGGSSGXGKGXATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNA--GILSSSDQTVLDLDFSAFDRLFAINVRG 127
            DV N   ++  ++   + +G++DI+ +NA    +  ++    DL  + ++ +  I + G
Sbjct: 62  XDVRNTDDIQKXIEQIDEKFGRIDILINNAAGNFICPAE----DLSVNGWNSVINIVLNG 117
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG-V 186
              C +   +  +E G++G+I+   +      G        +K  V+   ++ +V+ G  
Sbjct: 118 TFYCSQAIGKYWIEKGIKGNIINXVATYAWDAGPGVIHSAAAKAGVLAXTKTLAVEWGRK 177
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
           +GIRVN ++P  +          +  +  ++  +   PL G +     +A    +L   +
Sbjct: 178 YGIRVNAIAPGPIERTGGADKLWISEEXAKRTIQ-SVPL-GRLGTPEEIAGLAYYLCSDE 235
Query: 247 SEFVTGHDLVVDGG 260
           + ++ G     DGG
Sbjct: 236 AAYINGTCXTXDGG 249

>pdb|2EHD|A Chain A, Crystal Structure Analysis Of Oxidoreductase Length = 234

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 99/223 (44%), Gaps = 22/223 (9%)
Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           +ITG + GIGE TARL    G R+ ++A  +DE  R  A +  +     +  DV  E   
Sbjct: 9   LITGASRGIGEATARLLHAKGYRVGLMA--RDE-KRLQALAAELEGALPLPGDVREEGDW 65
Query: 79  KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV 138
              V +  + +G+L  + +NAG+     + V +L    +  +   N+ G    ++HA   
Sbjct: 66  ARAVAAMEEAFGELSALVNNAGV--GVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPA 123
Query: 139 MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG 198
           ++  G  G+IV   S+AG    K    Y+ SK  ++GL  +A + L    +RV  V P  
Sbjct: 124 LLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLP-- 180
Query: 199 LATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
                           V+  F   TP +   L+   VA AVLF
Sbjct: 181 --------------GSVDTGFAGNTPGQAWKLKPEDVAQAVLF 209

>pdb|4IIU|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-[acyl-Carrier Protein]reductase From Escherichia Coli Strain Cft073 Complexed With Nadp+ At 2.1 A Resolution Length = 267

Iteration: 1
 Score = 62.0 bits (149), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 110/251 (43%), Gaps = 20/251 (7%)
Query: 19  IITGGASGIGETTARLFADHGARMIV-----IADIQDELGRQVATSIGVGKCHYVHCDVT 73
           ++TG + GIG   AR  A  G  + V      A  Q+ L   VA     G    +  DV 
Sbjct: 30  LVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANG---GNGRLLSFDVA 86
Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           N  Q + +++  +  +G    + SNAGI  + D     L    +D +   N+      ++
Sbjct: 87  NREQCREVLEHEIAQHGAWYGVVSNAGI--ARDAAFPALSNDDWDAVIHTNLDSFYNVIQ 144
Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
                M+     G I+  +SV+G  G + + +Y  +K  +IG  ++ +++L    I VNC
Sbjct: 145 PCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITVNC 204
Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQT--PLEGVVLRAGHVADAVLFLACRDSEFVT 251
           ++P  + T       GM   E   L E  +  P++  + +A  VA    +L    + +VT
Sbjct: 205 IAPGLIDT-------GMIEMEESALKEAMSMIPMK-RMGQAEEVAGLASYLMSDIAGYVT 256
Query: 252 GHDLVVDGGFL 262
              + ++GG L
Sbjct: 257 RQVISINGGML 267

>pdb|3IAH|A Chain A, Crystal Structure Of Short Chain Dehydrogenase (ycik) From Salmonella Enterica Subsp. Enterica Serovar Typhimurium Str. Lt2 In Complex With Nadp And Acetate. Length = 256

Iteration: 1
 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 101/220 (45%), Gaps = 22/220 (10%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGK---CHYVH 69
           L+ ++ ++TG + GIG   A  +A +GA +I++   +++L R+VA  I   +     +  
Sbjct: 13  LQNRIILVTGASDGIGREAALTYARYGATVILLGRNEEKL-RRVAQHIADEQHVQPQWFT 71
Query: 70  CDV----TNECQVKALVDSTVQNYGQLDIMFSNAGIL----SSSDQTVLDLDFSAFDRLF 121
            D+      EC  + + D    +Y +LD +  NAG+L      S+Q     D   +  + 
Sbjct: 72  LDLLTCTAEEC--RQVADRIAAHYPRLDGVLHNAGLLGEIGPXSEQ-----DPQIWQDVX 124
Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            +NV       +    ++++    GS+V T+S  G  G      Y  SK A  G  +  +
Sbjct: 125 QVNVNATFXLTQALLPLLLKSDA-GSLVFTSSSVGRQGRANWGAYATSKFATEGXXQVLA 183
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
            +     +RVNC++P G  T  +  A   P ++ +KL  P
Sbjct: 184 DEYQNRSLRVNCINPGGTRT--SXRASAFPTEDPQKLKTP 221

>pdb|3EZL|A Chain A, Crystal Structure Of Acetyacetyl-Coa Reductase From Burkholderia Pseudomallei 1710b Length = 256

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 34/260 (13%)
Query: 16  KVAIITGGASGIGETT-ARLFAD----------HGARMIVIADIQDELGRQVATSIGVGK 64
           ++A +TGG  GIG +   RL  D          +  R +   + Q  LG     S G   
Sbjct: 14  RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEG--- 70
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
                 +V +    K   D      G++D++ +NAGI  + D     +    +  +   N
Sbjct: 71  ------NVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI--TRDVVFRKMTREDWQAVIDTN 122
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           +  +    K     MVE G  G I+  +SV G  G   +T+Y  +K  + G   S + ++
Sbjct: 123 LTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEV 181
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLF 241
              G+ VN VSP  + T +      +  D +EK+     P    V R G    +   V +
Sbjct: 182 ATKGVTVNTVSPGYIGTDM---VKAIRPDVLEKIV-ATIP----VRRLGSPDEIGSIVAW 233
Query: 242 LACRDSEFVTGHDLVVDGGF 261
           LA  +S F TG D  ++GG 
Sbjct: 234 LASEESGFSTGADFSLNGGL 253

>pdb|3EDM|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Agrobacterium Tumefaciens Length = 259

Iteration: 1
 Score = 61.2 bits (147), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 119/260 (45%), Gaps = 20/260 (7%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHY-V 68
            +   +  ++ G    IG   A  FA  GA +++  +   E        I  +G+    +
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+TN  +V+A + +    +G++  +   AG L +  +T+ ++D + + ++  +N+  +
Sbjct: 64  KADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVNLTSL 122
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAG-SCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               K A   M +GG   +IV  +S AG   GG     Y  SK AV+   R  + ++G  
Sbjct: 123 FLTAKTALPKMAKGG---AIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK 179
Query: 188 GIRVNCVSPHGLATPLTCH-AYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
            IRVN V P  ++T  T H  +  P  EV +     T L+    R G    VA  V FLA
Sbjct: 180 -IRVNAVCPGMIST--TFHDTFTKP--EVRERVAGATSLK----REGSSEDVAGLVAFLA 230
Query: 244 CRDSEFVTGHDLVVDGGFLI 263
             D+ +VTG    ++GG L 
Sbjct: 231 SDDAAYVTGACYDINGGVLF 250

>pdb|4DRY|A Chain A, The Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Reductase From Rhizobium Meliloti Length = 281

Iteration: 1
 Score = 60.5 bits (145), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 16/247 (6%)
Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVI---ADIQDELGRQVATSI 60
           S     K   EG++A++TGG +G+G   A+  +  G  +++     D+ D    ++    
Sbjct: 22  SXXAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRT 81
Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL-DLDFSAFDR 119
           G      V CDV +  QV AL  +    + +LD++ +NAG  S+     L ++ F  ++ 
Sbjct: 82  G-NIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAG--SNVPPVPLEEVTFEQWNG 138
Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGS-IVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           + A N+ G   C +HA R       RG  I+   S++          Y  +KHA+ GL +
Sbjct: 139 IVAANLTGAFLCTQHAFRXXKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTK 198
Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCH-AYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
           S ++    H I    +     AT  T   + G+     E   EP  P+E       H+A+
Sbjct: 199 STALDGRXHDIACGQIDIGNAATDXTARXSTGVLQANGEVAAEPTIPIE-------HIAE 251
Query: 238 AVLFLAC 244
           AV++ A 
Sbjct: 252 AVVYXAS 258

>pdb|3AFM|A Chain A, Crystal Structure Of Aldose Reductase A1-R Responsible For Alginate Metabolism Length = 258

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/259 (27%), Positives = 112/259 (43%), Gaps = 20/259 (7%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARM-----IVIADIQDELGRQVATSIGVGKCHY 67
           L+GK  +ITG + GIG  TARLFA  GA++        A+I + +    A   G      
Sbjct: 5   LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADG-GDAAFFA 63
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
                +  CQ   LVD  V  +G +D++ +NAG L    + + ++D + +D +   N+R 
Sbjct: 64  ADLATSEACQ--QLVDEFVAKFGGIDVLINNAGGLVGR-KPLPEIDDTFYDAVMDANIRS 120
Query: 128 MAACVK----HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           +    K    H A      G   +++ T S+AG  GG      + +  A +  V    V 
Sbjct: 121 VVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVD 180
Query: 184 LGVH-GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
                G+R N VSP  + T      +     +V        P+ G    A  +A A LF 
Sbjct: 181 FHTKDGVRFNIVSPGTVDTAF----HADKTQDVRDRISNGIPM-GRFGTAEEMAPAFLFF 235
Query: 243 ACR-DSEFVTGHDLVVDGG 260
           A    S ++TG  L ++GG
Sbjct: 236 ASHLASGYITGQVLDINGG 254

>pdb|3GED|A Chain A, Fingerprint And Structural Analysis Of A Apo Scor Enzyme From Clostridium Thermocellum Length = 247

Iteration: 1
 Score = 60.1 bits (144), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/258 (24%), Positives = 113/258 (43%), Gaps = 43/258 (16%)
Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
           I+TGG  GIG+     F + G ++  I DI ++     A         Y H DV +   +
Sbjct: 6   IVTGGGHGIGKQICLDFLEAGDKVCFI-DIDEKRSADFAKE--RPNLFYFHGDVADPLTL 62
Query: 79  KALVDSTVQNYGQLDIMFSNA-----GILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           K  V+  ++   ++D++ +NA     GILSS       L +  FD + ++ ++      +
Sbjct: 63  KKFVEYAMEKLQRIDVLVNNACRGSKGILSS-------LLYEEFDYILSVGLKAPYELSR 115
Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
                +++   +G I+  AS            Y  +K  ++ L  + ++ LG   + VNC
Sbjct: 116 LCRDELIKN--KGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGPD-VLVNC 172
Query: 194 VSPHGLA-------TPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
           ++P  +        T   C A  +PA +V       TP +        +++ VLFL  +D
Sbjct: 173 IAPGWINVTEQQEFTQEDCAA--IPAGKV------GTPKD--------ISNMVLFLCQQD 216
Query: 247 SEFVTGHDLVVDGGFLIR 264
             F+TG  ++VDGG   R
Sbjct: 217 --FITGETIIVDGGMSKR 232

>pdb|3E9Q|A Chain A, Crystal Structure Of The Short Chain Dehydrogenase From Shigella Flexneri Length = 273

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG---KCHYVH 69
           L  ++ ++TG + GIG   A  +A +GA +I++   +++L RQVA+ I      +  +  
Sbjct: 31  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKL-RQVASHINEETGRQPQWFI 89
Query: 70  CDV----TNECQVKALVDSTVQNYGQLDIMFSNAGIL----SSSDQTVLDLDFSAFDRLF 121
            D+    +  CQ   L    V NY +LD +  NAG+L      S+Q         +  + 
Sbjct: 90  LDLLTCTSENCQ--QLAQRIVVNYPRLDGVLHNAGLLGDVCPXSEQNP-----QVWQDVX 142
Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            INV       +    ++++    GS+V T+S  G  G      Y  SK A  G  +  +
Sbjct: 143 QINVNATFXLTQALLPLLLKSDA-GSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA 201
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP 221
            +     +RVNC++P G  T     A+  P ++ +KL  P
Sbjct: 202 DEY-QQRLRVNCINPGGTRTAXRASAF--PTEDPQKLKTP 238

>pdb|3TFO|A Chain A, Crystal Structure Of A Putative 3-Oxoacyl-(Acyl-Carrier-Protein) Reductase From Sinorhizobium Meliloti Length = 264

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 8/183 (4%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVT 73
           KV +ITG + GIGE  AR     GA++++ A  Q  +   +AT I    G       DVT
Sbjct: 5   KVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVLDVT 63
Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +   V A   + V  +G++D++ +NAG++  S    + +D   ++R+  +N++G+   + 
Sbjct: 64  DRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVD--EWERMIDVNIKGVLWGIG 121
Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
               +M E    G I+   S+           Y  +K AV  +  S  ++     IRV C
Sbjct: 122 AVLPIM-EAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAI--SDGLRQESTNIRVTC 178
Query: 194 VSP 196
           V+P
Sbjct: 179 VNP 181

>pdb|1XG5|A Chain A, Structure Of Human Putative Dehydrogenase Mgc4172 In Complex With Nadp Length = 279

Iteration: 1
 Score = 59.3 bits (142), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 109/242 (45%), Gaps = 19/242 (7%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMI----VIADIQDELGRQVATSIGVGKCH 66
            +   ++A++TG + GIG   AR     G +++     + +I +EL  +  ++   G   
Sbjct: 28  ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNI-EELAAECKSAGYPGTLI 86
Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
              CD++NE  + ++  +    +  +DI  +NAG+  +   T+L    S +  +F +NV 
Sbjct: 87  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL--ARPDTLLSGSTSGWKDMFNVNVL 144
Query: 127 GMAACVKHAARVMVEGGV-RGSIVCTASVAGSCGGKRRTD--YHMSKHAVIGL---VRSA 180
            ++ C + A + M E  V  G I+   S++G           Y  +K+AV  L   +R  
Sbjct: 145 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 204
Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
             +   H IR  C+SP  + T      +    ++    +E     +   L+   VA+AV+
Sbjct: 205 LREAQTH-IRATCISPGVVETQFAFKLHDKDPEKAAATYE-----QMKCLKPEDVAEAVI 258
Query: 241 FL 242
           ++
Sbjct: 259 YV 260

>pdb|1YB1|A Chain A, Crystal Structure Of Human 17-Beta-Hydroxysteroid Dehydrogenase Type Xi Length = 272

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 11/221 (4%)
Query: 6   MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG-K 64
           M   +  + G++ +ITG   GIG  TA  FA   +++++    +  L    A   G+G K
Sbjct: 22  MPKRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAK 81
Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN 124
            H    D +N   + +         G + I+ +NAG++ +SD  +        ++ F +N
Sbjct: 82  VHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSD--LFATQDPQIEKTFEVN 139
Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           V       K     M +    G IV  AS AG         Y  SK A +G  ++ + +L
Sbjct: 140 VLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDEL 198
Query: 185 G---VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ 222
               + G++  C+ P+ + T    +    P+  +    EP+
Sbjct: 199 AALQITGVKTTCLCPNFVNTGFIKN----PSTSLGPTLEPE 235

>pdb|1GZ6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Fragment Of Rat Peroxisomal Multifunctional Enzyme Type 2 Length = 319

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 44/252 (17%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           + +G+V ++TG   G+G   A  FA+ GA ++V+ D+  +         GVGK       
Sbjct: 6   RFDGRVVLVTGAGGGLGRAYALAFAERGA-LVVVNDLGGDFK-------GVGKGSSAADK 57
Query: 72  VTNECQVKA---------------LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
           V  E + +                LV + +  +G++D++ +NAGIL   D++   +    
Sbjct: 58  VVEEIRRRGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGIL--RDRSFSRISDED 115
Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           +D +  +++RG +  V  AA    +    G I+ TAS +G  G   + +Y  +K  ++GL
Sbjct: 116 WDIIQRVHLRG-SFQVTRAAWDHXKKQNYGRIIXTASASGIYGNFGQANYSAAKLGLLGL 174
Query: 177 VRSASVQLGVHGIRVNCVSPH-GLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHV 235
             +  ++   + I  N ++P+ G     T      P D VE L +P+           +V
Sbjct: 175 ANTLVIEGRKNNIHCNTIAPNAGSRXTETV----XPEDLVEAL-KPE-----------YV 218
Query: 236 ADAVLFLACRDS 247
           A  VL+L C +S
Sbjct: 219 APLVLWL-CHES 229

>pdb|3F1K|A Chain A, Crystal Structure Of Ycik From E. Coli, An Oxidoreductase, Complexed With Nadp+ At 2.6a Resolution Length = 252

Iteration: 1
 Score = 58.9 bits (141), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 34/251 (13%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG---KCHYVH 69
           L  ++ ++TG + GIG   A  +A +GA +I++   +++L RQVA+ I      +  +  
Sbjct: 10  LNDRIILVTGASDGIGREAAXTYARYGATVILLGRNEEKL-RQVASHINEETGRQPQWFI 68
Query: 70  CDV----TNECQVKALVDSTVQNYGQLDIMFSNAGIL----SSSDQTVLDLDFSAFDRLF 121
            D+    +  CQ   L      NY +LD +  NAG+L      S+Q     +   +  + 
Sbjct: 69  LDLLTCTSENCQ--QLAQRIAVNYPRLDGVLHNAGLLGDVCPXSEQ-----NPQVWQDVX 121
Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            +NV       +    ++++    GS+V T+S  G  G      Y  SK A  G  +  +
Sbjct: 122 QVNVNATFXLTQALLPLLLKSDA-GSLVFTSSSVGRQGRANWGAYAASKFATEGXXQVLA 180
Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
            +     +RVNC++P G  T +   A+  P ++ +KL  P             +    L+
Sbjct: 181 DEY-QQRLRVNCINPGGTRTAMRASAF--PTEDPQKLKTP-----------ADIXPLYLW 226
Query: 242 LACRDSEFVTG 252
           L   DS   TG
Sbjct: 227 LXGDDSRRKTG 237

>pdb|2QIO|A Chain A, X-Ray Structure Of Enoyl-Acyl Carrier Protein Reductase From Bacillus Anthracis With Triclosan Length = 256

Iteration: 1
 Score = 58.5 bits (140), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 34/268 (12%)
Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVI--ADIQDELGRQVATSIGVGKCHYV 68
           L+GK  ++ G A+   I    AR   + GA++I     +  +   R++A ++   +   +
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVL 63
Query: 69  HCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGIL------SSSDQTVLDLDFSAF 117
            CDVTN+ ++ A  ++  Q  G +      I F+N   L      +S D  +L  + SAF
Sbjct: 64  PCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAF 123
Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
                     + A  + A +VM EGG   +I+    + G    K      ++K ++   V
Sbjct: 124 S---------LTAVAREAKKVMTEGG---NILTLTYLGGERVVKNYNVMGVAKASLEASV 171
Query: 178 RSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGM-PADEVEKLFEPQTPLEGVVLRAGHV 235
           +  +  LG HGIRVN +S    A P+ T  A G+   + + +  E + PL     +   V
Sbjct: 172 KYLANDLGQHGIRVNAIS----AGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQE-EV 226
Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFLI 263
            D  +FL    +  VTG ++ VD G+ I
Sbjct: 227 GDTAVFLFSDLARGVTGENIHVDSGYHI 254

>pdb|3OJF|A Chain A, Crystal Structure Of The Bacillus Cereus Enoyl-Acyl Carrier Protein Reductase With Nadp+ And Indole Naphthyridinone (Complex Form) Length = 257

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 71/268 (26%), Positives = 121/268 (45%), Gaps = 34/268 (12%)
Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVI--ADIQDELGRQVATSIGVGKCHYV 68
           L+GK  ++ G A+   I    AR   + GA++I     +  +   R++A ++   +   +
Sbjct: 4   LQGKTFVVMGVANQRSIAWGIARSLHNAGAKLIFTYAGERLERNVRELADTLEGQESLVL 63
Query: 69  HCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGIL------SSSDQTVLDLDFSAF 117
            CDVTN+ ++ A  ++  Q  G +      I F+N   L      +S D  +L  + SAF
Sbjct: 64  PCDVTNDEELTACFETIKQEVGTIHGVAHCIAFANRDDLKGEFVDTSRDGFLLAQNISAF 123
Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
                     + A  + A +VM EGG   +I+    + G    K      ++K ++   V
Sbjct: 124 S---------LTAVAREAKKVMTEGG---NILTLTYLGGERVVKNYNVMGVAKASLEASV 171
Query: 178 RSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGM-PADEVEKLFEPQTPLEGVVLRAGHV 235
           +  +  LG HGIRVN +S    A P+ T  A G+   + + +  E + PL     +   V
Sbjct: 172 KYLANDLGQHGIRVNAIS----AGPIRTLSAKGVGDFNSILREIEERAPLRRTTTQE-EV 226
Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFLI 263
            D  +FL    +  VTG ++ VD G+ I
Sbjct: 227 GDTAVFLFSDLARGVTGENIHVDSGYHI 254

>pdb|3IOY|A Chain A, Structure Of Putative Short-Chain Dehydrogenase (Saro_0793) From Novosphingobium Aromaticivorans Length = 319

Iteration: 1
 Score = 58.5 bits (140), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 12/191 (6%)
Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADI-QDELGRQVATSIGVG---KCHYVHC 70
           G+ A +TGGA+G+G    R   + G + + IADI QD + + +AT    G   +   V  
Sbjct: 8   GRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV +    K   D     +G + I+ +NAG+  +  Q + +  +  +D L  +N+ G+  
Sbjct: 67  DVASREGFKMAADEVEARFGPVSILCNNAGV--NLFQPIEESSYDDWDWLLGVNLHGVVN 124
Query: 131 CVKHAARVMVE----GGVRGS-IVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            V      MVE    G  +G  +V TAS+A          Y+ +K AV GL  S    L 
Sbjct: 125 GVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLL 184
Query: 186 VHGIRVNCVSP 196
            + I V+ + P
Sbjct: 185 KYEIGVSVLCP 195

>pdb|1P33|A Chain A, Pteridine Reductase From Leishmania Tarentolae Complex With Nadph And Mtx Length = 289

Iteration: 1
 Score = 57.4 bits (137), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 31/211 (14%)
Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD-------------LDFSAFD 118
           VT   +  ALVD+   ++G+ D++ +NA     +     D             L+ +A D
Sbjct: 84  VTLFSRCSALVDACYMHWGRCDVLVNNASSFYPTPLLRKDAGEGGSSVGDKESLEVAAAD 143
Query: 119 RLFAINVRGMAACVKHAARVMVEG-----GVRGSIVCTASVAGSCGGKRRTDYHMSKHAV 173
            LF  N       +K  A+ + +      G   SIV       S      T Y M+K A+
Sbjct: 144 -LFGSNAIAPYFLIKAFAQRVADTRAEQRGTSYSIVNMVDAMTSQPLLGYTMYTMAKEAL 202
Query: 174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD---EVEKLFEPQTPLEGVVL 230
            GL RSA+++L    IRVN VSP GL+         +P D    V++ +  + PL     
Sbjct: 203 EGLTRSAALELASLQIRVNGVSP-GLSV--------LPDDMPFSVQEDYRRKVPLYQRNS 253
Query: 231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            A  V+D V+FL    ++++TG  + VDGG+
Sbjct: 254 SAEEVSDVVIFLCSPKAKYITGTCIKVDGGY 284

>pdb|4DA9|A Chain A, Crystal Structure Of Putative Short-Chain DehydrogenaseREDUCTASE FROM Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 107/256 (41%), Gaps = 16/256 (6%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ--VATSIGVG-KCHYVHCDV 72
            VAI+TGG  GIG   AR  A  G   I I  I D  G    +A   G+G +  ++  D+
Sbjct: 30  PVAIVTGGRRGIGLGIARALAASGFD-IAITGIGDAEGVAPVIAELSGLGARVIFLRADL 88
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +    +A VD+ V  +G++D + +NAGI S      LDL    FD +  +N+RG     
Sbjct: 89  ADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFT 148
Query: 133 KHAARVMVEGGVRG--SIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           +   +  +    R   SI+   SV+       R DY  SK  +    +  +++L   GI 
Sbjct: 149 QAVLKAXLASDARASRSIINITSVSAVXTSPERLDYCXSKAGLAAFSQGLALRLAETGIA 208
Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           V  V P  + +  T    G     +E    P         R G    + + V  LA    
Sbjct: 209 VFEVRPGIIRSDXTAAVSGKYDGLIESGLVPXR-------RWGEPEDIGNIVAGLAGGQF 261
Query: 248 EFVTGHDLVVDGGFLI 263
            F TG  +  DGG  I
Sbjct: 262 GFATGSVIQADGGLSI 277

>pdb|3T4X|A Chain A, Short Chain DehydrogenaseREDUCTASE FAMILY OXIDOREDUCTASE FROM Bacillus Anthracis Str. Ames Ancestor Length = 267

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 109/266 (40%), Gaps = 24/266 (9%)
Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG---RQVATSIGVGKCHYV 68
           +L+GK A++TG  +GIG+  A      GA +++    ++ +    +++           V
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPV 66
Query: 69  HCDVTNE--CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
             D+  E  CQ        ++ Y ++DI+ +N GI    +    D+    + +LF +N+ 
Sbjct: 67  VADLGTEQGCQ------DVIEKYPKVDILINNLGIFEPVE--YFDIPDEDWFKLFEVNIX 118
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                 +   +  +E    G ++  AS A     +    Y  +K   + L RS +     
Sbjct: 119 SGVRLTRSYLKKXIERK-EGRVIFIASEAAIXPSQEXAHYSATKTXQLSLSRSLAELTTG 177
Query: 187 HGIRVNCVSP-----HGLATPLTC--HAYGMPADEVEKLFEPQTPLEGVV---LRAGHVA 236
             + VN + P      G+ T L        +  +E EK F  +     ++   +R   +A
Sbjct: 178 TNVTVNTIXPGSTLTEGVETXLNSLYPNEQLTIEEAEKRFXKENRPTSIIQRLIRPEEIA 237
Query: 237 DAVLFLACRDSEFVTGHDLVVDGGFL 262
             V FL+   S  + G  L +DGG +
Sbjct: 238 HLVTFLSSPLSSAINGSALRIDGGLV 263

>pdb|1UAY|A Chain A, Crystal Structure Of Type Ii 3-Hydroxyacyl-Coa Dehydrogenase From Thermus Thermophilus Hb8 Length = 242

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 114/255 (44%), Gaps = 29/255 (11%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           + A++TGGASG+G   A      G R++V+ D++ E G  +          YV  DVT E
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYRVVVL-DLRRE-GEDLI---------YVEGDVTRE 51
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLD----FSAFDRLFAINVRGMAAC 131
             V+  V +  Q    L  + S AG+     + +L  +      +F R+  +N+ G    
Sbjct: 52  EDVRRAV-ARAQEEAPLFAVVSAAGV--GLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108
Query: 132 VKHAARVMVEG-----GVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           ++ AA  M E      G RG IV TASVA   G   +  Y  SK  V+ L   A+ +L  
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAG 168
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            GIRV  V+P    TPL     G+P ++ +     Q P    + R    A  VL +   +
Sbjct: 169 WGIRVVTVAPGLFDTPLL---QGLP-EKAKASLAAQVPFPPRLGRPEEYAALVLHIL--E 222
Query: 247 SEFVTGHDLVVDGGF 261
           +  + G  + +DG  
Sbjct: 223 NPMLNGEVVRLDGAL 237

>pdb|4EIT|A Chain A, Crystal Structure Of An Enoyl-(Acyl Carrier Protein) Reductase From Bartonella Henselae Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/202 (27%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT--VLDLDFSAFDRLFAINVR 126
           HCDV++   + A+ ++  + +G+LD +    G     + +   +D+  S F     I+V 
Sbjct: 70  HCDVSDSASIDAVFNTIEKKWGKLDFLVHAIGFSDKEELSGRYVDISESNFXXTXNISVY 129
Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH---MSKHAVIGLVRSASVQ 183
            + A  K A ++  +GG     + T +  G+   K   +Y+   ++K A+   V+  +V 
Sbjct: 130 SLTALTKRAEKLXSDGGS----ILTLTYYGAE--KVVPNYNVXGVAKAALEASVKYLAVD 183
Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           LG   IRVN +S    A P+   A     D   + K  E   PL   V     V D+ L+
Sbjct: 184 LGPKHIRVNAIS----AGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIE-EVGDSALY 238
Query: 242 LACRDSEFVTGHDLVVDGGFLI 263
           L    S  VTG    VD G+ I
Sbjct: 239 LLSDLSRSVTGEVHHVDSGYNI 260

>pdb|2XOX|A Chain A, Crystal Structure Of Pteridine Reductase (Ptr1) From Leishmania Donovani Length = 288

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 53/98 (54%), Gaps = 6/98 (6%)
Query: 164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           T Y M+K A+ GL RSA+++L    IRVN V P      L+  A  MP   V + +  + 
Sbjct: 192 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-----LSVLADDMPP-AVREDYRSKV 245
Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           PL      A  V+D V+FL    +++VTG  + VDGG+
Sbjct: 246 PLYQRDSSAAEVSDVVIFLCSSKAKYVTGTCVKVDGGY 283

>pdb|3KVO|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Hydroxysteroid Dehydrogenase Like 2 (Hsdl2) Length = 346

Iteration: 1
 Score = 52.4 bits (124), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT----- 58
           S+M     +L G    ITG + GIG+  A   A  GA +++ A       + + T     
Sbjct: 34  SAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAA 93
Query: 59  ----SIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF 114
               ++G GK      DV +E Q+ A V+  ++ +G +DI+ +NA  +S ++   LD   
Sbjct: 94  EEIEAVG-GKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTN--TLDTPT 150
Query: 115 SAFDRLFAINVRGM----AACVKHAARVMV 140
              D +  +N RG      AC+ +  +  V
Sbjct: 151 KRLDLMMNVNTRGTYLASKACIPYLKKSKV 180

>pdb|3OIF|A Chain A, Crystal Structure Of Enoyl-Acp Reductases I (Fabi) From B. Subtilis (Complex With Nad And Tcl) Length = 266

Iteration: 1
 Score = 52.0 bits (123), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 22/262 (8%)
Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVI--ADIQDELGRQVATSIGVGKCHYV 68
           LEG+  ++ G A+   I    AR   + GAR+I     +  ++   ++A ++       +
Sbjct: 5   LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIIL 64
Query: 69  HCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
            CDVTN+ +++    S  +  G +      I F+N   L       L+ +   F     I
Sbjct: 65  PCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGE---YLNTNRDGFLLAHNI 121
Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           +   + A VK A  +M EGG   SIV    + G           ++K ++   V+  +  
Sbjct: 122 SSYSLTAVVKAARPMMTEGG---SIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAAD 178
Query: 184 LGVHGIRVNCVSPHGLATPL-TCHAYGMPA-DEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           LG   IRVN +S    A P+ T  A G+   + + K  E + PL         V D   F
Sbjct: 179 LGKENIRVNSIS----AGPIRTLSAKGISDFNSILKDIEERAPLRRTTT-PEEVGDTAAF 233
Query: 242 LACRDSEFVTGHDLVVDGGFLI 263
           L    S  +TG +L VD GF I
Sbjct: 234 LFSDMSRGITGENLHVDSGFHI 255

>pdb|3KZV|A Chain A, The Crystal Structure Of A Cytoplasmic Protein With Unknown Function From Saccharomyces Cerevisiae Length = 254

Iteration: 1
 Score = 51.2 bits (121), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 62/118 (52%), Gaps = 1/118 (0%)
Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
           GKV ++TG + GIG++   +        +V    + E   +        +  YV  D+T 
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITE 61
Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           +  +K LV++ V+ +G++D + +NAG+L    Q V ++D +A+ +L+ IN   + + V
Sbjct: 62  DSVLKQLVNAAVKGHGKIDSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLV 118

>pdb|2P91|A Chain A, Crystal Structure Of Enoyl-[acyl-Carrier-Protein] Reductase (Nadh) From Aquifex Aeolicus Vf5 Length = 285

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 15/258 (5%)
Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           LEGK A+ITG A+   I    A+ F   GA++           R    + G G    V C
Sbjct: 19  LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKC 78
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT--VLDLDFSAFDRLFAINVRGM 128
           DV+ +  +K L     +N+G LDI+  +       +    V+D     F     I+V  +
Sbjct: 79  DVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSL 138
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
            A  +    +M   G  G+IV  +               ++K A+   VR  +  +  HG
Sbjct: 139 IALTRELLPLM--EGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHG 196
Query: 189 IRVNCVSPHGLATPL-TCHAYGMPADEVEKLFEPQTPLE--GVVLRAGHVADAVLFLACR 245
            R+N +S    A P+ T  AY +    +  L E  T +   G  +    V D  +FL   
Sbjct: 197 HRINAIS----AGPVKTLAAYSITGFHL--LMEHTTKVNPFGKPITIEDVGDTAVFLCSD 250
Query: 246 DSEFVTGHDLVVDGGFLI 263
            +  +TG  + VD G+ I
Sbjct: 251 WARAITGEVVHVDNGYHI 268

>pdb|3NYW|A Chain A, Crystal Structure Of A Betaketoacyl-[acp] Reductase (Fabg) From Bacteroides Thetaiotaomicron Length = 250

Iteration: 1
 Score = 50.8 bits (120), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 90/219 (41%), Gaps = 16/219 (7%)
Query: 17  VAIITGGASGIGETTARLFADHGARMIVIA-------DIQDELGRQVATSIGVGKCHYVH 69
           +AIITG + GIG   A   A  G R+++IA        + DE+ R   ++  V +   + 
Sbjct: 9   LAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIXR---SNKHVQEPIVLP 65
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+T+  +    +    Q YG +DI+ + A          L      F ++  INV    
Sbjct: 66  LDITDCTKADTEIKDIHQKYGAVDILVNAAAXFXDGS---LSEPVDNFRKIXEINVIAQY 122
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +K    +  +    G I   AS A   G      Y  +K A++GL  S   +L   GI
Sbjct: 123 GILKTVTEIX-KVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGI 181
Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGV 228
           RV  + P  + T     A G P  + E+  +P   L  +
Sbjct: 182 RVTTLCPGWVNTDXAKKA-GTPFKD-EEXIQPDDLLNTI 218

>pdb|3LF1|A Chain A, Apo Structure Of The Short Chain Oxidoreductase Q9hya2 From Pseudomonas Aeruginosa Pao1 Containing An Atypical Catalytic Center Length = 265

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 23/264 (8%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKCHYV 68
           L   VA++TGG+SGIG  T  L  + GA +   A   + L R   +++       +    
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERL-RAAESALRQRFPGARLFAS 64
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDV +  QV+A  ++  +  G   I+ +NAG      Q  +       D  ++  ++  
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAG------QGRVSTFAETTDEAWSEELQLK 118
Query: 129 AACVKHAARVM---VEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
              V H  R     +E     +IVC  S+  S           ++  V  LVRS + +  
Sbjct: 119 FFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFA 178
Query: 186 VHGIRVNCV----SPHGLATPLTCHAYGMPADEVEKLFE----PQTPLEGVVLRAGHVAD 237
             G+RVN +       G              D  +   +     Q PL G + +    A 
Sbjct: 179 PKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKPIEAAR 237
Query: 238 AVLFLACRDSEFVTGHDLVVDGGF 261
           A+LFLA   S + TG  + V GG 
Sbjct: 238 AILFLASPLSAYTTGSHIDVSGGL 261

>pdb|3GRK|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Reductase Sdr Glucose-Ribitol Dehydrogenase From Brucella Melitensis Length = 293

Iteration: 1
 Score = 50.4 bits (119), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 40/276 (14%)
Query: 5   SMCNAKNKLEGKVAIITGGASG--IGETTARLFADHGARMIV----------IADIQDEL 52
           SM      L+GK  +I G A+   I    A+   + GA +            +  + +EL
Sbjct: 21  SMTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL 80
Query: 53  GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT--VL 110
           G  VA           HCDV +   + A+ ++  + +G+LD +    G     + T   +
Sbjct: 81  GAFVAG----------HCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI 130
Query: 111 DLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH--- 167
           D   + F     I+V  + A  + A ++M +GG     + T +  G+   K   +Y+   
Sbjct: 131 DTSEANFTNTMLISVYSLTAVSRRAEKLMADGGS----ILTLTYYGAE--KVMPNYNVMG 184
Query: 168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPL 225
           ++K A+   V+  +V LG   IRVN +S    A P+   A     D   + K  E   PL
Sbjct: 185 VAKAALEASVKYLAVDLGPQNIRVNAIS----AGPIKTLAASGIGDFRYILKWNEYNAPL 240
Query: 226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
              V     V D  L+     S  VTG     D G+
Sbjct: 241 RRTV-TIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>pdb|2NWQ|A Chain A, Short Chain Dehydrogenase From Pseudomonas Aeruginosa Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 70/178 (39%), Gaps = 1/178 (0%)
Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV 78
            ITG  SG GE  AR FA+ G  +++    ++ L           +   +  DV +    
Sbjct: 25  FITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAX 84
Query: 79  KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV 138
            A VD+  + +  L  + +NAG+   +D      D   +D     N++G+    +     
Sbjct: 85  SAAVDNLPEEFATLRGLINNAGLALGTD-PAQSCDLDDWDTXVDTNIKGLLYSTRLLLPR 143
Query: 139 MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
           ++  G   SIV   SVAG         Y  +K  V     +    L   G+RV  + P
Sbjct: 144 LIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEP 201

>pdb|3TN7|A Chain A, Crystal Structure Of Short-Chain Alcohol Dehydrogenase From Hyperthermophilic Archaeon Thermococcus Sibiricus Complexed With 5- Hydroxy-Nadp Length = 257

Iteration: 1
 Score = 50.1 bits (118), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYVH 69
           LE KVA+ITG + GIGE  AR  A  G  + + A   D  +++  ++    GV +  Y H
Sbjct: 22  LEMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHH 80
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGI 101
            DV+    V+      ++ +G +D++ +NAG+
Sbjct: 81  LDVSKAESVEEFSKKVLERFGDVDVVVANAGL 112

>pdb|2DKN|A Chain A, Crystal Structure Of The 3-alpha-hydroxysteroid Dehydrogenase From Pseudomonas Sp. B-0831 Complexed With Nadh Length = 255

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 109/261 (41%), Gaps = 31/261 (11%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVI----ADIQDEL----GRQVATSIGVGKCHY 67
            V  ITG ASGIG     L A  G  +I I    ADI+ +L    GR+ A +  + +C  
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGG 61
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           V  D    C   A V  T  N G L +  +  G+ +  D   L    S   +  A+ V  
Sbjct: 62  V-LDGLVCC---AGVGVTAANSG-LVVAVNYFGVSALLDG--LAEALSRGQQPAAVIVGS 114
Query: 128 MAACVKHAARV-MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           +AA    AA + MVE  + G       +A    G+    Y  SK+AV  L R   V    
Sbjct: 115 IAATQPGAAELPMVEAMLAGDEARAIELA-EQQGQTHLAYAGSKYAVTCLARRNVVDWAG 173
Query: 187 HGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEP----QTPLEGVVLRAGHVADAVL 240
            G+R+N V+P  + TPL   +   P   +   +   P      P E        VA+A+ 
Sbjct: 174 RGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVAPLGRGSEPRE--------VAEAIA 225
Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           FL    + F+ G  L VDGG 
Sbjct: 226 FLLGPQASFIHGSVLFVDGGM 246

>pdb|3E03|A Chain A, Crystal Structure Of A Putative Dehydrogenase From Xanthomonas Campestris Length = 274

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 25/201 (12%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY----- 67
           L GK   ITG + GIG   A   A  GA + + A         VA     G  H      
Sbjct: 4   LSGKTLFITGASRGIGLAIALRAARDGANVAIAAK------SAVANPKLPGTIHSAAAAV 57
Query: 68  ---------VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
                    + CD+  E QV+A V +TV  +G +DI+ +NA  +    +  LD     FD
Sbjct: 58  NAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWL--RGTLDTPXKRFD 115
Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRG--SIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
               +N RG   C +     +++       ++    S+  +  G   T Y ++K     +
Sbjct: 116 LXQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGA-HTGYTLAKXGXSLV 174
Query: 177 VRSASVQLGVHGIRVNCVSPH 197
               + + G  G+ +N + P 
Sbjct: 175 TLGLAAEFGPQGVAINALWPR 195

>pdb|1FJH|A Chain A, The Crystal Structure Of 3-Alpha-Hydroxysteroid Dehydrogenase From Comamonas Testosteroni, A Member Of The Short Chain DehydrogenaseREDUCTASE FAMILY Length = 257

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/261 (24%), Positives = 101/261 (38%), Gaps = 31/261 (11%)
Query: 17  VAIITGGASGIGETTARLFADHGARMI--------VIADIQDELGRQVATSIGVGKCH-- 66
           + +I+G A+GIG  T ++    G +++        VIAD+    GR+ A +  + KC   
Sbjct: 3   IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIADLSTAEGRKQAIADVLAKCSKG 62
Query: 67  ---YVHCDVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
               V C      Q K L +    NY G  ++M +    L    Q    +  S      A
Sbjct: 63  MDGLVLCAGLGP-QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLA 121
Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
            +        K+   + +E G           AG  GG     Y  SK+A+   VR  + 
Sbjct: 122 FD--------KNPLALALEAGEEAKARAIVEHAGEQGGN--LAYAGSKNALTVAVRKRAA 171
Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
             G  G+R+N ++P    TPL       P   + + K   P     G       +A  + 
Sbjct: 172 AWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM----GRRAEPSEMASVIA 227
Query: 241 FLACRDSEFVTGHDLVVDGGF 261
           FL    + +V G  +V+DGG 
Sbjct: 228 FLMSPAASYVHGAQIVIDGGI 248

>pdb|2BD0|A Chain A, Chlorobium Tepidum Sepiapterin Reductase Complexed With Nadp And Sepiapterin Length = 244

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 87/213 (40%), Gaps = 21/213 (9%)
Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY--------- 67
           + +ITG   GIG   A  FA   AR     D +  L     T+  + K            
Sbjct: 4   ILLITGAGKGIGRAIALEFA-RAARHH--PDFEPVLVLSSRTAADLEKISLECRAEGALT 60
Query: 68  --VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
             +  D+++   V+ L    V+ YG +D + +NAG+       + DL    FD     N+
Sbjct: 61  DTITADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNL 118
Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
           +G    +  A   ++E    G I    SVA +   +  + Y MSK    GLV +  +   
Sbjct: 119 KG-TFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYAR 177
Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL 218
              +R+  V P  + TP+    +G   DE++ L
Sbjct: 178 KCNVRITDVQPGAVYTPM----WGKVDDEMQAL 206

>pdb|3I4F|A Chain A, Structure Of Putative 3-oxoacyl-reductase From Bacillus Thuringiensis Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/245 (21%), Positives = 103/245 (42%), Gaps = 8/245 (3%)
Query: 18  AIITGGASGIG-ETTARLFADHGARMIVIADIQDELGRQVATSIGVG-KCHYVHCDVTNE 75
           A+IT G  G+G + T +L A   +  +        +     T   V  +  +V  DVT +
Sbjct: 10  ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKK 69
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             +  +V+  + ++G++D + +NAG      + ++D +   ++ +   N+  +   +K  
Sbjct: 70  EDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLV 129
Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
             VM +      I      A S  G   R+ +  +K  ++ L ++ + +   +GI  N V
Sbjct: 130 VPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMV 189
Query: 195 SPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD 254
            P  +   +          E  +L E  TP+ G       +A  + FL   DS+ +TG  
Sbjct: 190 CPGDIIGEMK----EATIQEARQLKEHNTPI-GRSGTGEDIARTISFLCEDDSDMITGTI 244
Query: 255 LVVDG 259
           + V G
Sbjct: 245 IEVTG 249

>pdb|3L77|A Chain A, X-Ray Structure Alcohol Dehydrogenase From Archaeon Thermococcus Sibiricus Complexed With 5-Hydroxy-Nadp Length = 235

Iteration: 1
 Score = 48.5 bits (114), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHYVHC 70
           E KVA+ITG + GIGE  AR  A  G  + + A   D  +++  ++    GV +  Y H 
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGV-EVFYHHL 59
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGI 101
           DV+    V+      ++ +G +D++ +NAG+
Sbjct: 60  DVSKAESVEEFSKKVLERFGDVDVVVANAGL 90

>pdb|1W6U|A Chain A, Structure Of Human Decr Ternary Complex Length = 302

Iteration: 1
 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 90/196 (45%), Gaps = 10/196 (5%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHY 67
           N  +GKVA ITGG +G+G+    L +  GA+ ++ +   D+      Q+++  G  K H 
Sbjct: 22  NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTG-NKVHA 80
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAG--ILSSSDQTVLDLDFSAFDRLFAINV 125
           + CDV +   V+  V   ++  G  +I+ +NA    +S +++    L  +A+  +  I +
Sbjct: 81  IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFISPTER----LSPNAWKTITDIVL 136
Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G A       + +++     + +   ++    G         +K  V  + +S + + G
Sbjct: 137 NGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG 196
Query: 186 VHGIRVNCVSPHGLAT 201
            +G+R N + P  + T
Sbjct: 197 KYGMRFNVIQPGPIKT 212

>pdb|3GMD|A Chain A, Structure-Based Design Of 7-Azaindole-Pyrrolidines As Inhibitors Of 11beta-Hydroxysteroid-Dehydrogenase Type I Length = 264

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   +  GA +++ A  ++ L + V+    +G    HY+  
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 66
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  +    +  G LD++     IL+   QT L L   D  +  R+  +N   
Sbjct: 67  TMEDMTFAEQFIVKAGKLMGGLDML-----ILNHITQTSLSLFHDDIHSVRRVMEVNF-- 119
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           ++  V   A + +     GSI   +S+AG         Y  SK A+ G   +   +L + 
Sbjct: 120 LSYVVMSTAALPMLKQSNGSIAVISSLAGKVTYPMVAPYSASKFALDGFFSTIRTELYIT 179
Query: 188 GIRVN 192
            + V+
Sbjct: 180 KVNVS 184

>pdb|1Y5M|A Chain A, The Crystal Structure Of Murine 11b-Hydroxysteroid Dehydrogenase: An Important Therapeutic Target For Diabetes Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 45/185 (24%), Positives = 81/185 (43%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   +  GA +++ A  ++ L + V+    +G    HY+  
Sbjct: 16  LQGKKVIVTGASKGIGREMAYHLSKMGAHVVLTARSEEGLQKVVSRCLELGAASAHYIAG 75
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  +    +  G LD++     IL+   QT L L   D  +  R+  +N   
Sbjct: 76  TMEDMTFAEQFIVKAGKLMGGLDML-----ILNHITQTSLSLFHDDIHSVRRVMEVNF-- 128
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           ++  V   A + +     GSI   +S+AG         Y  SK A+ G   +   +L + 
Sbjct: 129 LSYVVMSTAALPMLKQSNGSIAVISSLAGKMTQPMIAPYSASKFALDGFFSTIRTELYIT 188
Query: 188 GIRVN 192
            + V+
Sbjct: 189 KVNVS 193

>pdb|1W0C|A Chain A, Inhibition Of Leishmania Major Pteridine Reductase (Ptr1) By 2,4,6-Triaminoquinazoline; Structure Of The Nadp Ternary Complex. Length = 307

Iteration: 1
 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           T Y M+K A+ GL RSA+++L    IRVN V P      L+     MP   V +    + 
Sbjct: 211 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-----LSVLVDDMPP-AVWEGHRSKV 264
Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           PL      A  V+D V+FL    ++++TG  + VDGG+
Sbjct: 265 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 302

>pdb|1E92|A Chain A, Pteridine Reductase 1 From Leishmania Major Complexed With Nadp+ And Dihydrobiopterin Length = 288

Iteration: 1
 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           T Y M+K A+ GL RSA+++L    IRVN V P      L+     MP   V +    + 
Sbjct: 192 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-----LSVLVDDMP-PAVWEGHRSKV 245
Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           PL      A  V+D V+FL    ++++TG  + VDGG+
Sbjct: 246 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 283

>pdb|1E7W|A Chain A, One Active Site, Two Modes Of Reduction Correlate The Mechanism Of Leishmania Pteridine Reductase With Pterin Metabolism And Antifolate Drug Resistance In Trpanosomes Length = 291

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           T Y M+K A+ GL RSA+++L    IRVN V P      L+     MP   V +    + 
Sbjct: 195 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-----LSVLVDDMP-PAVWEGHRSKV 248
Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           PL      A  V+D V+FL    ++++TG  + VDGG+
Sbjct: 249 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286

>pdb|2QHX|A Chain A, Structure Of Pteridine Reductase From Leishmania Major Complexed With A Ligand Length = 328

Iteration: 1
 Score = 47.4 bits (111), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           T Y M+K A+ GL RSA+++L    IRVN V P      L+     MP   V +    + 
Sbjct: 232 TIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG-----LSVLVDDMP-PAVWEGHRSKV 285
Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           PL      A  V+D V+FL    ++++TG  + VDGG+
Sbjct: 286 PLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323

>pdb|2ILT|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Sulfone Inhibitor Length = 275

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 22  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 81
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 82  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 136
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 137 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 194
Query: 188 GIRVN 192
            + V+
Sbjct: 195 RVNVS 199

>pdb|1XU7|A Chain A, Crystal Structure Of The Interface Open Conformation Of Tetrameric 11b-hsd1 Length = 286

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 140
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 141 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198
Query: 188 GIRVN 192
            + V+
Sbjct: 199 RVNVS 203

>pdb|3PDJ|A Chain A, Crystal Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase 1 (11b-Hsd1) In Complex With 4,4-Disubstituted Cyclohexylbenzamide Inhibitor Length = 273

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 13  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 72
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 73  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 127
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 128 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 185
Query: 188 GIRVN 192
            + V+
Sbjct: 186 RVNVS 190

>pdb|2BEL|A Chain A, Structure Of Human 11-Beta-Hydroxysteroid Dehydrogenase In Complex With Nadp And Carbenoxolone Length = 283

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 29  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 88
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 89  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 143
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 144 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 201
Query: 188 GIRVN 192
            + V+
Sbjct: 202 RVNVS 206

>pdb|3D5Q|A Chain A, Crystal Structure Of 11b-Hsd1 In Complex With Triazole Inhibitor Length = 272

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 127 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 184
Query: 188 GIRVN 192
            + V+
Sbjct: 185 RVNVS 189

>pdb|2IRW|A Chain A, Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp And Adamantane Ether Inhibitor Length = 264

Iteration: 1
 Score = 46.2 bits (108), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 7   LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 66
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 67  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 121
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 122 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 179
Query: 188 GIRVN 192
            + V+
Sbjct: 180 RVNVS 184

>pdb|4BB6|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 92  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 146
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 147 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVS 204
Query: 188 GIRVN 192
            + V+
Sbjct: 205 RVNVS 209

>pdb|4BB5|A Chain A, Free-Wilson And Structural Approaches To Co-Optimising Human And Rodent Isoform Potency For 11b-Hydroxysteroid Dehydrogenase Type 1 11b-Hsd1 Inhibitors Length = 292

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 32  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 91
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 92  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 146
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 147 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVS 204
Query: 188 GIRVN 192
            + V+
Sbjct: 205 RVNVS 209

>pdb|2RBE|A Chain A, The Discovery Of 2-Anilinothiazolones As 11beta-Hsd1 Inhibitors Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 15  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 74
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 75  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 129
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 130 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 187
Query: 188 GIRVN 192
            + V+
Sbjct: 188 RVNVS 192

>pdb|3CH6|A Chain A, Crystal Structure Of 11beta-Hsd1 Double Mutant (L262r, F278e) Complexed With (3,3-Dimethylpiperidin-1-Yl)(6-(3- Fluoro-4-Methylphenyl)pyridin-2-Yl)methanone Length = 286

Iteration: 1
 Score = 45.8 bits (107), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 26  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 85
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 86  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNF-- 138
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           ++  V   A + +     GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 139 LSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 198
Query: 188 GIRVN 192
            + V+
Sbjct: 199 RVNVS 203

>pdb|4HFR|A Chain A, Human 11beta-Hydroxysteroid Dehydrogenase Type 1 In Complex With An Orally Bioavailable Acidic Inhibitor Azd4017. Length = 272

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + V+    +G    HY+  
Sbjct: 12  LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAG 71
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL---DFSAFDRLFAINVRG 127
            + +    +  V    +  G LD++     IL+    T L+L   D     +   +N   
Sbjct: 72  TMEDMTFAEQFVAQAGKLMGGLDML-----ILNHITNTSLNLFHDDIHHVRKSMEVNFLS 126
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 127 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPLVAAYSASKFALDGFFSSIRKEYSVS 184
Query: 188 GIRVN 192
            + V+
Sbjct: 185 RVNVS 189

>pdb|3ASU|A Chain A, Crystal Structure Of Serine Dehydrogenase From Escherichia Coli Length = 248

Iteration: 1
 Score = 45.4 bits (106), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 12/184 (6%)
Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC 76
           + ++TG  +G GE   R F   G ++I     Q+ L +++   +G    +    DV N  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELG-DNLYIAQLDVRNRA 59
Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
            ++ ++ S    +  +DI+ +NAG L+   +         ++ +   N +G+    +   
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAG-LALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVL 118
Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL--GVHG--IRVN 192
             MVE    G I+   S AGS        Y  +K      VR  S+ L   +HG  +RV 
Sbjct: 119 PGMVERN-HGHIINIGSTAGSWPYAGGNVYGATK----AFVRQFSLNLRTDLHGTAVRVT 173
Query: 193 CVSP 196
            + P
Sbjct: 174 DIEP 177

>pdb|1XSE|A Chain A, Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + VA    +G    HY+  
Sbjct: 30  LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 89
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            + +    +  V       G LD++  N  + +    T    +     +   +N      
Sbjct: 90  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNR--LTFFHGEIDNVRKSMEVNFHSFVV 147
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               A  ++++   +GSI   +SVAG         Y  SK A+ G   +   +  V+ + 
Sbjct: 148 LSVAAMPMLMQS--QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 205
Query: 191 VN 192
           V+
Sbjct: 206 VS 207

>pdb|3LZ6|A Chain A, Guinea Pig 11beta Hydroxysteroid Dehydrogenase With Pf-877423 Length = 263

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + VA    +G    HY+  
Sbjct: 7   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 66
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            + +    +  V       G LD++  N  + +    T    +     +   +N      
Sbjct: 67  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNR--LTFFHGEIDNVRKSMEVNFHSFVV 124
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               A  ++++   +GSI   +SVAG         Y  SK A+ G   +   +  V+ + 
Sbjct: 125 LSVAAMPMLMQS--QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 182
Query: 191 VN 192
           V+
Sbjct: 183 VS 184

>pdb|3UXY|A Chain A, The Crystal Structure Of Short Chain Dehydrogenase From Rhodobacter Sphaeroides Length = 266

Iteration: 1
 Score = 45.1 bits (105), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 68/252 (26%), Positives = 101/252 (40%), Gaps = 19/252 (7%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
            EGKVA++TG A GIG             +           R VA   G+    ++  D+
Sbjct: 26  FEGKVALVTGAAGGIGGAVV-------TALRAAGARVAVADRAVA---GIAADLHLPGDL 75
Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT-VLDLDFSAFDRLFAINVRGMAAC 131
                   L  +     G+LDI+ +NAG++S    T   D D+S       +NV      
Sbjct: 76  REAAYADGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLS---LGVNVEAPFRI 132
Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + AA  +      G+IV  AS  G   G     Y ++K A+  L +         GIR+
Sbjct: 133 CR-AAIPLXAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCXGXDHAPQGIRI 191
Query: 192 NCVSPHGLATPLTCHAY---GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           N V P+ + TP     +   G   D          PL G +     +AD VLFLA   + 
Sbjct: 192 NAVCPNEVNTPXLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAAR 250
Query: 249 FVTGHDLVVDGG 260
           ++ G  + V+GG
Sbjct: 251 YLCGSLVEVNGG 262

>pdb|3G49|A Chain A, N-(Pyridin-2-Yl) Arylsulfonamide Inhibitors Of 11b-Hydroxysteroid Dehydrogenase Type 1: Discovery Of Pf-915275 Length = 277

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + VA    +G    HY+  
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            + +    +  V       G LD++  N  + +    T    +     +   +N      
Sbjct: 69  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNR--LTFFHGEIDNVRKSMEVNFHSFVV 126
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               A  ++++   +GSI   +SVAG         Y  SK A+ G   +   +  V+ + 
Sbjct: 127 LSVAAMPMLMQS--QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 184
Query: 191 VN 192
           V+
Sbjct: 185 VS 186

>pdb|3DWF|A Chain A, Crystal Structure Of The Guinea Pig 11beta-Hydroxysteroid Dehydrogenase Type 1 Mutant F278e Length = 276

Iteration: 1
 Score = 44.7 bits (104), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 6/182 (3%)
Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L+GK  I+TG + GIG   A   A  GA ++V A  ++ L + VA    +G    HY+  
Sbjct: 9   LQGKKVIVTGASKGIGREIAYHLAKMGAHVVVTARSKEALQKVVARCLELGAASAHYIAG 68
Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            + +    +  V       G LD++  N  + +    T    +     +   +N      
Sbjct: 69  SMEDMTFAEEFVAEAGNLMGGLDMLILNHVLYNR--LTFFHGEIDNVRKSMEVNFHSFVV 126
Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               A  ++++   +GSI   +SVAG         Y  SK A+ G   +   +  V+ + 
Sbjct: 127 LSVAAMPMLMQS--QGSIAVVSSVAGKITYPLIAPYSASKFALDGFFSTLRSEFLVNKVN 184
Query: 191 VN 192
           V+
Sbjct: 185 VS 186

>pdb|2PD3|A Chain A, Crystal Structure Of The Helicobacter Pylori Enoyl-Acyl Carrier Protein Reductase In Complex With Hydroxydiphenyl Ether Compounds, Triclosan And Diclosan Length = 275

Iteration: 1
 Score = 43.5 bits (101), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 110/259 (42%), Gaps = 22/259 (8%)
Query: 13  LEGKVAIITGGASG--IGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH- 69
           L+GK  +I G A+   I    A+   + GA +     + + L ++V          YV+ 
Sbjct: 4   LKGKKGLIVGVANNKSIAYGIAQSCFNQGATL-AFTYLNESLEKRVRPIAQELNSPYVYE 62
Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRG 127
            DV+ E   K+L +S  ++ G LD +  +         + ++L+   SAF+    I+V  
Sbjct: 63  LDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYS 122
Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH---MSKHAVIGLVRSASVQL 184
           +         ++      G+ V T S  GS   K    Y+   ++K A+   VR  +V L
Sbjct: 123 LIELTNTLKPLLN----NGASVLTLSYLGST--KYMAHYNVMGLAKAALESAVRYLAVDL 176
Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           G H IRVN +S    A P+   A    AD   + K  E   PL   V     V +A ++L
Sbjct: 177 GKHHIRVNALS----AGPIRTLASSGIADFRMILKWNEINAPLRKNV-SLEEVGNAGMYL 231
Query: 243 ACRDSEFVTGHDLVVDGGF 261
               S  V+G    VD G+
Sbjct: 232 LSSLSSGVSGEVHFVDAGY 250

>pdb|3M1A|A Chain A, The Crystal Structure Of A Short-Chain Dehydrogenase From Streptomyces Avermitilis To 2a Length = 281

Iteration: 1
 Score = 42.7 bits (99), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 81/194 (41%), Gaps = 17/194 (8%)
Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           KV ++TG +SG G   A      G  +I  A   + L   VA      +   +  DVT+ 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY--PDRAEAISLDVTDG 63
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAG------ILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            ++  +    +  YG++D++ +NAG         ++++ + D        LF ++V G A
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRD--------LFELHVFGPA 115
Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +       E G  GS+V  +S  G       + Y  +K A+  L    + ++   GI
Sbjct: 116 RLTRALLPQXRERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGI 174
Query: 190 RVNCVSPHGLATPL 203
           +V  V P    T L
Sbjct: 175 KVLIVEPGAFRTNL 188

>pdb|3UCE|A Chain A, Crystal Structure Of A Small-Chain Dehydrogenase In Complex With Nadph Length = 223

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 114/254 (44%), Gaps = 46/254 (18%)
Query: 17  VAIITGGASGIG-ETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           V ++ GG SGIG E   +L ++H   ++ +A  Q  L                  D+++E
Sbjct: 8   VYVVLGGTSGIGAELAKQLESEH--TIVHVASRQTGL------------------DISDE 47
Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
             V    ++     G  D +   AG  + + + V+D++ +     F     G     KH 
Sbjct: 48  KSVYHYFETI----GAFDHLIVTAGSYAPAGK-VVDVEVTQAKYAFDTKFWGAVLAAKHG 102
Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL---GVHGIRVN 192
           AR + +G   GSI  T+ +       R+   +    A I     A+ ++    +  IRVN
Sbjct: 103 ARYLKQG---GSITLTSGML-----SRKVVANTYVKAAINAAIEATTKVLAKELAPIRVN 154
Query: 193 CVSPHGLATPLTCHAY-GMPADEVEKLFE-PQTPLE-GVVLRAGHVADAVLFLACRDSEF 249
            +SP GL       AY GM AD+ + +++  Q+ L  G V  A  +A A LF A ++S +
Sbjct: 155 AISP-GLT---KTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLF-AIQNS-Y 208
Query: 250 VTGHDLVVDGGFLI 263
           +TG  + VDGG L+
Sbjct: 209 MTGTVIDVDGGALL 222

>pdb|1W73|A Chain A, Binary Structure Of Human Decr Solved By Semet Sad. Length = 302

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/196 (22%), Positives = 88/196 (44%), Gaps = 10/196 (5%)
Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVATSIGVGKCHY 67
           N  +GKVA ITGG +G+G+    L +  GA+ ++ +   D+      Q+++  G  K H 
Sbjct: 22  NSFQGKVAFITGGGTGLGKGXTTLLSSLGAQCVIASRKXDVLKATAEQISSQTG-NKVHA 80
Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNA--GILSSSDQTVLDLDFSAFDRLFAINV 125
           + CDV +   V+  V   ++  G  +I+ +NA    +S +++    L  +A+  +  I +
Sbjct: 81  IQCDVRDPDXVQNTVSELIKVAGHPNIVINNAAGNFISPTER----LSPNAWKTITDIVL 136
Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G A       + +++     + +   ++    G         +K  V    +S + + G
Sbjct: 137 NGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAXSKSLAAEWG 196
Query: 186 VHGIRVNCVSPHGLAT 201
            +G R N + P  + T
Sbjct: 197 KYGXRFNVIQPGPIKT 212

>pdb|2YW9|A Chain A, Crystal Structure Of Tt0143 From Thermus Thermophilus Hb8 Length = 261

Iteration: 1
 Score = 41.2 bits (95), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 67/261 (25%), Positives = 105/261 (40%), Gaps = 22/261 (8%)
Query: 13  LEGKVAIITG--GASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYV 68
           L GK A++ G      +G   A    + GA   V    Q E  R  A  +   +G     
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAE--VALSYQAERLRPEAEKLAEALGGALLF 63
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG- 127
             DVT + ++ AL     + +G LD +                +D    D L A+ V   
Sbjct: 64  RADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAY 123
Query: 128 -MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            + A  + A  ++ EGG    IV     A      +     ++K A+   VR  + +LG 
Sbjct: 124 SLVAVARRAEPLLREGG---GIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGP 180
Query: 187 HGIRVNCVSPHGLATPL-TCHAYGMPADEVEKLFE--PQT-PLEGVVLRAGHVADAVLFL 242
            G+RVN +S    A P+ T  A  +P     K+++   QT PL   + +   V +  LFL
Sbjct: 181 KGVRVNAIS----AGPVRTVAARSIPG--FTKMYDRVAQTAPLRRNITQE-EVGNLGLFL 233
Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
               +  +TG  + VD G+ I
Sbjct: 234 LSPLASGITGEVVYVDAGYHI 254

>pdb|3E9N|A Chain A, Crystal Structure Of A Putative Short-Chain DehydrogenaseREDUCTASE FROM CORYNEBACTERIUM GLUTAMICUM Length = 245

Iteration: 1
 Score = 40.8 bits (94), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 18/195 (9%)
Query: 13  LEGKVAIITGGASGIG-ETTARLFADHGARMIVIADIQDELGRQ---VATSIGVGKCHYV 68
           L+ K+A++TG   G+G E    L  DH    IV A     LGR    +A    +     +
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDH----IVYA-----LGRNPEHLAALAEIEGVEPI 53
Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+  E   +  VD  ++N   +D +   A +  + D T+     + +     +NV   
Sbjct: 54  ESDIVKEVLEEGGVDK-LKNLDHVDTLVHAAAV--ARDTTIEAGSVAEWHAHLDLNVIVP 110
Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           A   +     +      G ++   S AG+      T Y  SKHA+ GL  +   +   +G
Sbjct: 111 AELSRQLLPAL--RAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNG 168
Query: 189 IRVNCVSPHGLATPL 203
           IRV+ VSP    TP+
Sbjct: 169 IRVSTVSPGPTNTPM 183

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	264
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	1e-121
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	6e-96
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	2e-93
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	2e-91
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-91
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	7e-90
4dqx_A	277	Probable oxidoreductase protein; structural genomi	3e-89
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	1e-88
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	3e-88
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	1e-87
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	4e-87
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	5e-86
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	1e-83
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-83
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	4e-83
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	1e-82
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	2e-82
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	3e-82
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	4e-80
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	6e-80
1spx_A	278	Short-chain reductase family member (5L265); paral	7e-80
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	7e-80
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	8e-80
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	9e-80
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	6e-79
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	2e-78
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-77
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	2e-77
4e4y_A	244	Short chain dehydrogenase family protein; structur	1e-76
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	6e-76
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	2e-75
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	1e-74
1xkq_A	280	Short-chain reductase family member (5D234); parra	3e-74
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	4e-74
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	4e-74
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	6e-74
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	5e-73
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	5e-73
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	6e-73
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	3e-72
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	5e-72
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-71
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-71
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	6e-71
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	9e-71
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	1e-70
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-70
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	5e-70
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	3e-69
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	4e-69
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	8e-69
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	1e-68
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-68
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	3e-68
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	6e-68
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	1e-67
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-67
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	7e-66
3imf_A	257	Short chain dehydrogenase; structural genomics, in	1e-65
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	2e-65
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-65
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	3e-65
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	3e-65
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	4e-65
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	5e-65
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	5e-65
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	9e-65
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-64
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	2e-64
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	3e-64
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	1e-63
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	1e-63
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	1e-63
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	2e-63
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-63
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	3e-63
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	4e-63
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	5e-63
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-62
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	3e-62
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	2e-61
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-61
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	4e-61
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	4e-61
1xq1_A	266	Putative tropinone reducatse; structural genomics,	8e-61
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	1e-60
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-60
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-60
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	4e-60
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	5e-60
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	3e-59
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	4e-59
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	4e-59
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	2e-58
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	2e-58
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	3e-58
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	4e-58
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	7e-58
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	9e-58
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	1e-57
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	1e-57
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	4e-57
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-56
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-56
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	3e-56
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	7e-56
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	8e-56
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	1e-55
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	3e-55
3cxt_A	291	Dehydrogenase with different specificities; rossma	3e-55
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	4e-55
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	4e-55
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	5e-55
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	7e-55
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	1e-54
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	2e-54
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	6e-54
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	9e-54
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	1e-53
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	3e-53
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	1e-52
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	2e-52
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	2e-52
3rih_A	293	Short chain dehydrogenase or reductase; structural	3e-52
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	2e-51
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	8e-51
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-50
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-50
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	4e-50
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	4e-50
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	4e-50
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	2e-49
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-49
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	3e-49
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	5e-49
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	9e-49
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	1e-48
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	1e-48
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	3e-48
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	6e-48
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	2e-47
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	4e-47
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-46
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	5e-46
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	8e-45
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	1e-44
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	2e-44
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	5e-44
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	5e-44
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	9e-44
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	2e-43
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	2e-43
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	7e-43
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	7e-43
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	1e-42
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	5e-42
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	6e-42
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	7e-42
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	7e-42
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	4e-41
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	4e-41
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	8e-41
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	1e-40
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	1e-40
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	2e-40
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	3e-40
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	2e-39
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	3e-39
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	3e-39
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	4e-39
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	1e-35
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	7e-39
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	2e-38
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	2e-38
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	6e-38
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	1e-36
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	2e-36
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	4e-36
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	2e-35
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	1e-25
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	9e-25
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	4e-24
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-24
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	1e-22
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	5e-22
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	4e-18
4alk_A	282	ENR, enoyl-[acyl-carrier-protein] reductase [NADPH	1e-17
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	8e-17
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	5e-16
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	7e-16
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	1e-15
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	4e-15
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	1e-14
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	1e-14
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	3e-14
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	4e-14
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	5e-14
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	1e-13
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	8e-10
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	8e-08
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	9e-08
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	1e-06
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	4e-05
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	1e-04
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	2e-04
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	3e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  346 bits (890), Expect = e-121
 Identities = 123/266 (46%), Positives = 177/266 (66%), Gaps = 5/266 (1%)

Query: 1   MADSSMCNA-KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS 59
           M  +S  ++  N+L+ KVAIITGGA GIGETTA+LF  +GA+ +VIADI D+ G++V  +
Sbjct: 1   MGSTSTPDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADDHGQKVCNN 59

Query: 60  IGV-GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
           IG      +VHCDVT +  V+ LVD+T+  +G+LDIMF N G+LS++  ++L+     F 
Sbjct: 60  IGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFK 119

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD-YHMSKHAVIGLV 177
           R+  INV G     KHAARVM+    +GSIV TAS++    G+  +  Y  +KHAV+GL 
Sbjct: 120 RVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLT 178

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
            S   +LG +GIRVNCVSP+ +A+PL    +G+ +  VE+L      L+G +LRA  VAD
Sbjct: 179 TSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVAD 238

Query: 238 AVLFLACRDSEFVTGHDLVVDGGFLI 263
           AV +LA  +S++V+G +LV+DGG+  
Sbjct: 239 AVAYLAGDESKYVSGLNLVIDGGYTR 264

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  281 bits (721), Expect = 6e-96
 Identities = 89/252 (35%), Positives = 136/252 (53%), Gaps = 15/252 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L GKVA+++GGA G+G +  R     GA+ +V  DI DE G+ +A  +      YVH 
Sbjct: 3   GRLTGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDEEGKAMAAELA-DAARYVHL 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT   Q KA VD+ V  +G L ++ +NAGI   +  T+ D   + + R+  +N+ G+  
Sbjct: 61  DVTQPAQWKAAVDTAVTAFGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFL 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++   + M E G RGSI+  +S+ G  G      Y  +K AV GL +S +++LG  GIR
Sbjct: 119 GIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIR 177

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+T           E +F  QT L G       V++ V++LA  +S + 
Sbjct: 178 VNSIHPGLVKTPMT-------DWVPEDIF--QTAL-GRAAEPVEVSNLVVYLASDESSYS 227

Query: 251 TGHDLVVDGGFL 262
           TG + VVDGG +
Sbjct: 228 TGAEFVVDGGTV 239

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score =  274 bits (704), Expect = 2e-93
 Identities = 78/255 (30%), Positives = 123/255 (48%), Gaps = 10/255 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N+L+GKVA++TGGASG+G    +L    GA+ +  +DI +  G+Q+A  +G  +  +V  
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAAELG-ERSMFVRH 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++E     ++ +  +  G L+++ +NAGIL   D  +       F RL  IN   +  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLPGD--METGRLEDFSRLLKINTESVFI 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG-- 188
             +     M E G  GSI+  ASV+     ++   Y  SK AV  L R+A++     G  
Sbjct: 118 GCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYA 175

Query: 189 IRVNCVSPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           IRVN + P G+ TP+   +       E+           G       +A  VLFLA  +S
Sbjct: 176 IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRA-GRAYMPERIAQLVLFLASDES 234

Query: 248 EFVTGHDLVVDGGFL 262
             ++G +L  D   L
Sbjct: 235 SVMSGSELHADNSIL 249

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score =  270 bits (693), Expect = 2e-91
 Identities = 87/253 (34%), Positives = 125/253 (49%), Gaps = 9/253 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L GKVAI+TG  +GIG   AR  AD G   ++ ADI  +     AT IG         DV
Sbjct: 27  LAGKVAIVTGAGAGIGLAVARRLADEGCH-VLCADIDGDAADAAATKIG-CGAAACRVDV 84

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++E Q+ A+VD+ V  +G +D + +NAG+      +++D     FDR+ AIN+RG   C 
Sbjct: 85  SDEQQIIAMVDACVAAFGGVDKLVANAGV--VHLASLIDTTVEDFDRVIAINLRGAWLCT 142

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           KHAA  M+E G  G+IV  +S+AG         Y MSK  +I L R  + +L   GIR N
Sbjct: 143 KHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSN 201

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFE---PQTPLEGVVLRAGHVADAVLFLACRDSEF 249
            + P  + TP+   A  M    +              G +     +A  V+FL   D+  
Sbjct: 202 TLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFLLSDDASM 260

Query: 250 VTGHDLVVDGGFL 262
           +TG   + DGG +
Sbjct: 261 ITGTTQIADGGTI 273

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score =  269 bits (689), Expect = 6e-91
 Identities = 81/252 (32%), Positives = 122/252 (48%), Gaps = 7/252 (2%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +LE KVAIITG   GIG  T+R+ A  GAR +V+AD+ +      A S+G     +   
Sbjct: 7   AELENKVAIITGACGGIGLETSRVLARAGAR-VVLADLPETDLAGAAASVG-RGAVHHVV 64

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+TNE  V+AL+D T+  +G+LDI+ +NA     +D  V  +    +D  F +N RG   
Sbjct: 65  DLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTML 124

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K+A   ++  G  G+IV  +S          T Y  +K A+  L R  + Q G HG+R
Sbjct: 125 MCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVR 183

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
            N ++P  + TP            +  +F       G +     +A+ V FLA   + F+
Sbjct: 184 CNAIAPGLVRTPRL---EVGLPQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDRAAFI 239

Query: 251 TGHDLVVDGGFL 262
           TG  +  D G L
Sbjct: 240 TGQVIAADSGLL 251

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score =  265 bits (681), Expect = 7e-90
 Identities = 91/253 (35%), Positives = 124/253 (49%), Gaps = 9/253 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N L GK  IITGGA G+G   AR     GAR +V+AD+ DE G   A  +G     Y H 
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATARELG-DAARYQHL 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E   + +V    + +G +D + +NAGI  S+   +       F ++  IN+ G+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGI--STGMFLETESVERFRKVVEINLTGVFI 116

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +K     M + G  GSIV  +S AG  G    + Y  SK  V GL + A+V+LG   IR
Sbjct: 117 GMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V P    TP+T            +   P TP+  V    G +A AV+ L    S +V
Sbjct: 176 VNSVHPGMTYTPMTAET----GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231

Query: 251 TGHDLVVDGGFLI 263
           TG +L VDGG+  
Sbjct: 232 TGAELAVDGGWTT 244

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score =  265 bits (679), Expect = 3e-89
 Identities = 86/265 (32%), Positives = 138/265 (52%), Gaps = 8/265 (3%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           +   ++      L  +V I+TGG SGIG  TA LFA +GA  +V+AD+ ++   +VA  I
Sbjct: 13  LGTENLYFQSMDLNQRVCIVTGGGSGIGRATAELFAKNGAY-VVVADVNEDAAVRVANEI 71

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
           G  K   V  DV++    +++V+ T   +G++D++ +NAG    +   V+ +    +DR+
Sbjct: 72  G-SKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGF--GTTGNVVTIPEETWDRI 128

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
            ++NV+G+  C K+   VM   G  GSI+ T S   +     RT Y  SK A+  L R+ 
Sbjct: 129 MSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVASKGAISSLTRAM 187

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADA 238
           ++     GIRVN V+P  + +P     +    D  ++   F  +  +   +  A  +A+A
Sbjct: 188 AMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM-DRMGTAEEIAEA 246

Query: 239 VLFLACRDSEFVTGHDLVVDGGFLI 263
           +LFLA   S F TG  L VDGG  I
Sbjct: 247 MLFLASDRSRFATGSILTVDGGSSI 271

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score =  262 bits (672), Expect = 1e-88
 Identities = 81/255 (31%), Positives = 123/255 (48%), Gaps = 7/255 (2%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA+ITG  SG GE  A+ FA  GA+ +VI D       +VA  IG      V  D
Sbjct: 6   SLEGKVALITGAGSGFGEGMAKRFAKGGAK-VVIVDRDKAGAERVAGEIG-DAALAVAAD 63

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           ++ E  V A V++ +  +G++DI+ +NAGI     Q    ++   FDR+  +NVRG+   
Sbjct: 64  ISKEADVDAAVEAALSKFGKVDILVNNAGI-GHKPQNAELVEPEEFDRIVGVNVRGVYLM 122

Query: 132 VKHAARVMVE---GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
                    E    G    I+  AS            Y+ +K  V+ + ++ +++L    
Sbjct: 123 TSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAK 182

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRV  ++P    TPL     G  ++E+ K F    P+ G +L+   +A+A  FL    + 
Sbjct: 183 IRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLCSPQAS 241

Query: 249 FVTGHDLVVDGGFLI 263
            +TG  L VDGG  I
Sbjct: 242 MITGVALDVDGGRSI 256

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score =  262 bits (671), Expect = 3e-88
 Identities = 77/261 (29%), Positives = 124/261 (47%), Gaps = 16/261 (6%)

Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY 67
               +  GKV ++TGG  GIG    R F + GAR +VI D  +  GR +   +      +
Sbjct: 2   ATGTRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDESGGRALEQELP--GAVF 58

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           + CDVT E  VK LV  T++ +G+LD + +NAG      Q   +     F +L  +N+ G
Sbjct: 59  ILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGH-HPPPQRPEETSAQGFRQLLELNLLG 117

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                K A   + +    G+++  +S+ G+ G  +   Y  +K AV  + ++ ++    +
Sbjct: 118 TYTLTKLALPYLRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPY 175

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKL--FEPQTPLEGVVLRAGH---VADAVLFL 242
           G+RVNC+SP  + TPL      +  D    +       PL     R G    V  A +FL
Sbjct: 176 GVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG----RMGQPAEVGAAAVFL 231

Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
           A  ++ F TG +L+V GG  +
Sbjct: 232 AS-EANFCTGIELLVTGGAEL 251

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score =  260 bits (668), Expect = 1e-87
 Identities = 82/254 (32%), Positives = 120/254 (47%), Gaps = 7/254 (2%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
           ++LEGK+AI+TG +SGIG   A LFA  GA+ +V+         ++   I    G+   +
Sbjct: 4   SRLEGKIAIVTGASSGIGRAAALLFAREGAK-VVVTARNGNALAELTDEIAGGGGEAAAL 62

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV +E   +ALV+  V+ +G LD  F+NAG    +   +  L    +      N+   
Sbjct: 63  AGDVGDEALHEALVELAVRRFGGLDTAFNNAGA-LGAMGEISSLSVEGWRETLDTNLTSA 121

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGVH 187
               K+    +   G  GS+  T+S  G   G      Y  SK  +IGLV++ +V+LG  
Sbjct: 122 FLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGAR 180

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           GIRVN + P G  TP         A E     E    L   + R   +A+A L+LA   +
Sbjct: 181 GIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL-KRIARPEEIAEAALYLASDGA 239

Query: 248 EFVTGHDLVVDGGF 261
            FVTG  L+ DGG 
Sbjct: 240 SFVTGAALLADGGA 253

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score =  259 bits (664), Expect = 4e-87
 Identities = 76/263 (28%), Positives = 129/263 (49%), Gaps = 18/263 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCH 66
            +   +V +ITGG SG+G  TA   A  GA+ + + D+  E       ++       +  
Sbjct: 9   TRFTDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLETAPDAEVL 67

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
               DV++E QV+A V +T + +G++D  F+NAGI             + FD++ +IN+R
Sbjct: 68  TTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI-EGKQNPTESFTAAEFDKVVSINLR 126

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           G+   ++   ++M E G  G +V TASV G  G   ++ Y  +KH V+GL R+++V+ G 
Sbjct: 127 GVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGR 185

Query: 187 HGIRVNCVSPHGLATPLT----CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAV 239
           +GIR+N ++P  + TP+              +  + F    P +    R G    +A  V
Sbjct: 186 YGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK----RYGEAPEIAAVV 241

Query: 240 LFLACRDSEFVTGHDLVVDGGFL 262
            FL   D+ +V    + +DGG  
Sbjct: 242 AFLLSDDASYVNATVVPIDGGQS 264

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score =  255 bits (655), Expect = 5e-86
 Identities = 77/257 (29%), Positives = 135/257 (52%), Gaps = 10/257 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVH 69
           N+L+GKVAIITGG  GIG   A  F + GA+ ++I     ++G + A S+G   +  +  
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSDVGEKAAKSVGTPDQIQFFQ 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D ++E     L D+T + +G +  + +NAGI  + +++V +   + + +L A+N+ G+ 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--H 187
              +   + M   G+  SI+  +S+ G  G      Y+ SK AV  + +SA++   +  +
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            +RVN V P  + TPL      +P  E       +TP+ G +     +A   ++LA  +S
Sbjct: 179 DVRVNTVHPGYIKTPLV---DDLPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNES 234

Query: 248 EFVTGHDLVVDGGFLIR 264
           +F TG + VVDGG+  +
Sbjct: 235 KFATGSEFVVDGGYTAQ 251

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score =  249 bits (639), Expect = 1e-83
 Identities = 82/255 (32%), Positives = 124/255 (48%), Gaps = 15/255 (5%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYVHCD 71
            +VAI+TG +SG G   A  F   G R +   D+  E   + A +       K   V  D
Sbjct: 2   SRVAIVTGASSGNGLAIATRFLARGDR-VAALDLSAETLEETARTHWHAYADKVLRVRAD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT-VLDLDFSAFDRLFAINVRGMAA 130
           V +E  V A + +T++ +G +D++ +NAGI  +S+   +       FD++ A+NVRG+  
Sbjct: 61  VADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFL 120

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +     M+  G  G IV  ASVA       R+ Y  SK AV+ L +S +V     GIR
Sbjct: 121 GCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIR 179

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
            N V P  + TP+T   + +   E+      + P +      G    VADAV+FLA  D+
Sbjct: 180 CNAVCPGMIETPMT--QWRLDQPELRDQVLARIPQK----EIGTAAQVADAVMFLAGEDA 233

Query: 248 EFVTGHDLVVDGGFL 262
            +V G  LV+DG + 
Sbjct: 234 TYVNGAALVMDGAYT 248

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score =  248 bits (637), Expect = 3e-83
 Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 12/254 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+ KV I+TG  SGIG   A+ FA + +  +V  ++ ++   Q+   +     +   V  
Sbjct: 5   LKNKVVIVTGAGSGIGRAIAKKFALNDSI-VVAVELLEDRLNQIVQELRGMGKEVLGVKA 63

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV+ +  V+  V  T + Y ++D++ +NAGI       V ++    ++R+ A+N+     
Sbjct: 64  DVSKKKDVEEFVRRTFETYSRIDVLCNNAGI-MDGVTPVAEVSDELWERVLAVNLYSAFY 122

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +    +M++ G +G IV TAS+AG  GG     Y ++KH +IGL RS +   G  GIR
Sbjct: 123 SSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIR 181

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
              V P  + T +   +       +  L +  +       R      +A+ ++FLA  ++
Sbjct: 182 AVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSS----RLAEPEDIANVIVFLASDEA 237

Query: 248 EFVTGHDLVVDGGF 261
            FV G  +VVDGG 
Sbjct: 238 SFVNGDAVVVDGGL 251

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score =  249 bits (637), Expect = 4e-83
 Identities = 84/254 (33%), Positives = 120/254 (47%), Gaps = 11/254 (4%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L  K+A+ITG  SGIG   A+ F   GAR + I   + ++       IG G    +  
Sbjct: 25  QRLNAKIAVITGATSGIGLAAAKRFVAEGAR-VFITGRRKDVLDAAIAEIG-GGAVGIQA 82

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D  N  ++  L +      G++D++F NAG    S   + ++    +D  F  NV+G+  
Sbjct: 83  DSANLAELDRLYEKVKAEAGRIDVLFVNAGG--GSMLPLGEVTEEQYDDTFDRNVKGVLF 140

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            V+ A  ++  G    S+V T S AGS G    + Y  SK A+    R+  + L   GIR
Sbjct: 141 TVQKALPLLARGS---SVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIR 197

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKL---FEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           +N +SP    T       G    + + L      Q P+ G V RA  VA A LFLA  DS
Sbjct: 198 INTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM-GRVGRAEEVAAAALFLASDDS 256

Query: 248 EFVTGHDLVVDGGF 261
            FVTG +L VDGG 
Sbjct: 257 SFVTGAELFVDGGS 270

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score =  248 bits (635), Expect = 1e-82
 Identities = 85/261 (32%), Positives = 124/261 (47%), Gaps = 21/261 (8%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +   KVAI+TGG+SGIG         +GA+ +V   + ++    V+         +   
Sbjct: 10  EEFTDKVAIVTGGSSGIGLAVVDALVRYGAK-VVSVSLDEKSDVNVSD--------HFKI 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVTNE +VK  V+ T + YG++DI+ +NAGI       +       + R+  +NV G   
Sbjct: 61  DVTNEEEVKEAVEKTTKKYGRIDILVNNAGI--EQYSPLHLTPTEIWRRIIDVNVNGSYL 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K+   VM+  G  GSI+  ASV      K    Y  SKHA++GL RS ++      IR
Sbjct: 119 MAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYA-PKIR 176

Query: 191 VNCVSPHGLATPLTCHAYGMPA-------DEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
            N V P  + TP+   A  M         +   + +  Q P+ G + R   VA+ V FLA
Sbjct: 177 CNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVAEVVAFLA 235

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
              S F+TG  L VDGG L +
Sbjct: 236 SDRSSFITGACLTVDGGLLSK 256

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score =  247 bits (634), Expect = 2e-82
 Identities = 83/263 (31%), Positives = 120/263 (45%), Gaps = 16/263 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           KL G+VA+ITGGASG+G      F   GAR + + D   E  R++  + G G    V  D
Sbjct: 2   KLTGEVALITGGASGLGRALVDRFVAEGAR-VAVLDKSAERLRELEVAHG-GNAVGVVGD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS---DQTVLDLDFSAFDRLFAINVRGM 128
           V +    K   +  +  +G++D +  NAGI   S        D   +AFD +F +NV+G 
Sbjct: 60  VRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGY 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              VK     +V     GS+V T S AG         Y  +KHAV+GLVR  + +L    
Sbjct: 120 IHAVKACLPALVSSR--GSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELA-PH 176

Query: 189 IRVNCVSPHGLATPLT------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           +RVN V+P G+ T L            + +  +  + +   P+ G +        A +F 
Sbjct: 177 VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFF 235

Query: 243 ACRD-SEFVTGHDLVVDGGFLIR 264
           A R  S   TG  L  DGG  +R
Sbjct: 236 ATRGDSLPATGALLNYDGGMGVR 258

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score =  246 bits (630), Expect = 3e-82
 Identities = 81/257 (31%), Positives = 125/257 (48%), Gaps = 17/257 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
               GK  ++TGGA GIG   A+ FA  GA  + + D++ E G++VA +IG     +   
Sbjct: 2   GLFAGKGVLVTGGARGIGRAIAQAFAREGAL-VALCDLRPE-GKEVAEAIGG---AFFQV 56

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+ +E +    V+      G++D++ +NA I  ++  + L +    + R+  +N+     
Sbjct: 57  DLEDERERVRFVEEAAYALGRVDVLVNNAAI--AAPGSALTVRLPEWRRVLEVNLTAPMH 114

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
               AAR M + G  G+IV  ASV G    +    Y+ SK  ++ L RS ++ L    IR
Sbjct: 115 LSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIR 173

Query: 191 VNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           VN V+P  +AT     A  +  D     + +E    L     R G    VA+AVLFLA  
Sbjct: 174 VNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALR----RLGKPEEVAEAVLFLASE 229

Query: 246 DSEFVTGHDLVVDGGFL 262
            + F+TG  L VDGG  
Sbjct: 230 KASFITGAILPVDGGMT 246

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score =  242 bits (619), Expect = 4e-80
 Identities = 78/260 (30%), Positives = 119/260 (45%), Gaps = 17/260 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-----GKCHY 67
            + +  ++TGG SGIG+  A      GA  ++I     +        +       G   Y
Sbjct: 9   FQDRTYLVTGGGSGIGKGVAAGLVAAGAS-VMIVGRNPDKLAGAVQELEALGANGGAIRY 67

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
              D+TNE +    VD+    +G+L  +   AG  S +   +  +D  A+ R   +NV G
Sbjct: 68  EPTDITNEDETARAVDAVTAWHGRLHGVVHCAGG-SENIGPITQVDSEAWRRTVDLNVNG 126

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
               +KHAAR MV GG  GS V  +S+A S   +    Y ++K AV  L++ A+ +LG  
Sbjct: 127 TMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGAS 185

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
            +RVN + P  + T L          E+   +   TPL     R G    VA+  +FL  
Sbjct: 186 WVRVNSIRPGLIRTDLVAAITESA--ELSSDYAMCTPLP----RQGEVEDVANMAMFLLS 239

Query: 245 RDSEFVTGHDLVVDGGFLIR 264
             + FVTG  + VDGG ++R
Sbjct: 240 DAASFVTGQVINVDGGQMLR 259

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score =  240 bits (615), Expect = 6e-80
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 18/260 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +LEGK A+ITG A GIG   A  +   GA  + IADI  E  RQ A  IG    + V  
Sbjct: 4   KRLEGKSALITGSARGIGRAFAEAYVREGAT-VAIADIDIERARQAAAEIG-PAAYAVQM 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT +  + A + +TV++ G LDI+ +NA +       ++++   ++++LFAINV G   
Sbjct: 62  DVTRQDSIDAAIAATVEHAGGLDILVNNAAL--FDLAPIVEITRESYEKLFAINVAGTLF 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ AAR M+  G  G I+  AS AG  G      Y  +K AVI L +SA + L  H I 
Sbjct: 120 TLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRIN 179

Query: 191 VNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVL 240
           VN ++P  +                  P  E ++L     P      R G    +    +
Sbjct: 180 VNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFG----RMGTAEDLTGMAI 235

Query: 241 FLACRDSEFVTGHDLVVDGG 260
           FLA  +S+++      VDGG
Sbjct: 236 FLASAESDYIVSQTYNVDGG 255

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score =  240 bits (616), Expect = 7e-80
 Identities = 82/265 (30%), Positives = 125/265 (47%), Gaps = 18/265 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-----VGKC 65
            +   KVAIITG ++GIG  TA LFA  GA+ + I     E   +    I          
Sbjct: 2   TRFAEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAERLEETRQQILAAGVSEQNV 60

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILS--SSDQTVLDLDFSAFDRLFAI 123
           + V  DVT +     ++ +T+  +G+LDI+ +NAG     S  +T       ++D    +
Sbjct: 61  NSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNL 120

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVA-GSCGGKRRTDYHMSKHAVIGLVRSASV 182
           N+R + A  K A   +      G IV  +S+A G         Y ++K A+    R+ ++
Sbjct: 121 NLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAI 178

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL--RAG---HVAD 237
            L  HGIRVN +SP  +AT     A GMP +  +K +     ++  V     G    +A+
Sbjct: 179 DLIQHGIRVNSISPGLVATGFG-SAMGMPEETSKKFYSTMATMKECVPAGVMGQPQDIAE 237

Query: 238 AVLFLACRD-SEFVTGHDLVVDGGF 261
            + FLA R  S ++ GH LVVDGG 
Sbjct: 238 VIAFLADRKTSSYIIGHQLVVDGGS 262

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score =  240 bits (615), Expect = 7e-80
 Identities = 67/262 (25%), Positives = 115/262 (43%), Gaps = 20/262 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
             L  KV +I+G    +G T AR  A+ GA  +V+A    E    VA  +     +   V
Sbjct: 7   GLLTDKVVVISGVGPALGTTLARRCAEQGAD-LVLAARTVERLEDVAKQVTDTGRRALSV 65

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+T++ QV  LVD T++ YG++D++ +NA  + S  +   +  F        + V G 
Sbjct: 66  GTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPS-MKPFANTTFEHMRDAIELTVFGA 124

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              ++     + E    G++V   S+       +   Y M+K A++ + ++ + +LG  G
Sbjct: 125 LRLIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKG 182

Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADA 238
           IRVN V P  +               YG   +++       + L+    R      VA A
Sbjct: 183 IRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLK----RLPTEDEVASA 238

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           +LF+A   +  +TG  L V+ G
Sbjct: 239 ILFMASDLASGITGQALDVNCG 260

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score =  240 bits (615), Expect = 8e-80
 Identities = 85/264 (32%), Positives = 124/264 (46%), Gaps = 28/264 (10%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           + L  KV I+TG + GIG   A  F D G++ ++   I D             K  ++ C
Sbjct: 4   SDLRDKVVIVTGASMGIGRAIAERFVDEGSK-VIDLSIHDPGE---------AKYDHIEC 53

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVTN  QVKA +D   + YG + ++ +NAGI   S   +  +    + R+  +N+ G   
Sbjct: 54  DVTNPDQVKASIDHIFKEYGSISVLVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYY 111

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K A   M+      SIV  +SV  S   K  + Y  SKHAVIGL +S ++      +R
Sbjct: 112 ASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYA-PLLR 169

Query: 191 VNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVL 240
            N V P  + TPL          +  M  ++    +  + P++    R G    VA AV 
Sbjct: 170 CNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQ----RIGKPQEVASAVA 225

Query: 241 FLACRDSEFVTGHDLVVDGGFLIR 264
           FLA R++ F+TG  L VDGG  IR
Sbjct: 226 FLASREASFITGTCLYVDGGLSIR 249

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score =  240 bits (614), Expect = 9e-80
 Identities = 81/267 (30%), Positives = 117/267 (43%), Gaps = 24/267 (8%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
            K  GKV ++TG    IG  TA   A+ G   I + D+  E   +   S+     +    
Sbjct: 3   KKFNGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNREALEKAEASVREKGVEARSY 61

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDVT+E  V   VDS V+++G++D +F+NAG    +   V D     F R+  INV G 
Sbjct: 62  VCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARVLTINVTGA 120

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              +K  +R M+     G IV TAS+AG  G      Y  SK A+I L  +A++ L  + 
Sbjct: 121 FHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYN 179

Query: 189 IRVNCVSPHGLATPLT------------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH-- 234
           IRVN +SP  +                    +      V +      P+     R G   
Sbjct: 180 IRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR----RYGDIN 235

Query: 235 -VADAVLFLACRDSEFVTGHDLVVDGG 260
            +   V FL   DS F+TG +L + GG
Sbjct: 236 EIPGVVAFLLGDDSSFMTGVNLPIAGG 262

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score =  239 bits (611), Expect = 6e-79
 Identities = 82/282 (29%), Positives = 128/282 (45%), Gaps = 30/282 (10%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-------- 62
            ++EGKVA +TG A G G + A   A  GA  I+  DI   +   V  +           
Sbjct: 7   GRVEGKVAFVTGAARGQGRSHAVRLAQEGAD-IIAVDICKPIRAGVVDTAIPASTPEDLA 65

Query: 63  ----------GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDL 112
                      +      DV +   +KA VDS V+  G+LDI+ +NAGI +  D T+   
Sbjct: 66  ETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGD-TLDKT 124

Query: 113 DFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA 172
               +  +  IN+ G+   VK     M+ GG  GSI+ T+SV G         Y  +KH 
Sbjct: 125 SEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHG 184

Query: 173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP----------ADEVEKLFEPQ 222
           V+GL+R+  V+LG H IRVN V P  + TP+  +                D++  + +  
Sbjct: 185 VVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQMF 244

Query: 223 TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
             L    +    +++AVLF A  ++ ++TG  L +D G  ++
Sbjct: 245 HTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK 286

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score =  237 bits (607), Expect = 2e-78
 Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 11/261 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
                VA+ITG  SGIG  TA   A  G   +           +VA  I    G+   + 
Sbjct: 25  NQPSPVALITGAGSGIGRATALALAADGVT-VGALGRTRTEVEEVADEIVGAGGQAIALE 83

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV++E Q++  V   V  +G LDI+ +NAGI       + DL    +D   A+N+RG  
Sbjct: 84  ADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVWA-PIDDLKPFEWDETIAVNLRGTF 142

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAG--SCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
             +      + + G  G+IV  +S+ G  +      T Y  +K A + +V+  +++LG H
Sbjct: 143 LTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKH 201

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL-RAGH---VADAVLFLA 243
            IRVN V P  + T ++ +      +E     E       +   + G    VA+ + FL 
Sbjct: 202 HIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLV 261

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
              +  VTG  + +DGG  + 
Sbjct: 262 SERARHVTGSPVWIDGGQGLL 282

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score =  235 bits (603), Expect = 1e-77
 Identities = 71/266 (26%), Positives = 121/266 (45%), Gaps = 24/266 (9%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-----VGKC 65
            +  GK  IITG ++GIG + A +FA  GA+ + I    ++   +    I        K 
Sbjct: 22  ARFSGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNEDRLEETKQQILKAGVPAEKI 80

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
           + V  DVT       ++++T+  +G++DI+ +NAG   +      D     + + F +N 
Sbjct: 81  NAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNF 140

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           + +    +     +++    G IV  +S VAG         Y  +K A+    R  ++ L
Sbjct: 141 QAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDL 198

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL------FEPQTPLEGVVLRAG---HV 235
             HG+RVN VSP  +AT     A G+P    +KL       +   P+       G    +
Sbjct: 199 IQHGVRVNSVSPGAVATGFM-GAMGLPETASDKLYSFIGSRKECIPVG----HCGKPEEI 253

Query: 236 ADAVLFLACRD-SEFVTGHDLVVDGG 260
           A+ ++FLA R+ S ++ G  +V DGG
Sbjct: 254 ANIIVFLADRNLSSYIIGQSIVADGG 279

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score =  233 bits (598), Expect = 2e-77
 Identities = 77/256 (30%), Positives = 121/256 (47%), Gaps = 15/256 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L+GKV I+T  A GIG+  A  FA  GA+ ++  DI +   +++    G+        
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAK-VIATDINESKLQELEKYPGI---QTRVL 57

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT + Q+    +       +LD++F+ AG       TVLD +   +D    +NVR M  
Sbjct: 58  DVTKKKQIDQFANE----VERLDVLFNVAGF--VHHGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            +K     M+     G+I+  +SVA S  G   R  Y  +K AVIGL +S +      GI
Sbjct: 112 MIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 190 RVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           R NCV P  + TP          +  E    F  +    G    A  +A   ++LA  +S
Sbjct: 171 RCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDES 229

Query: 248 EFVTGHDLVVDGGFLI 263
            +VTG+ +++DGG+ +
Sbjct: 230 AYVTGNPVIIDGGWSL 245

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score =  231 bits (592), Expect = 1e-76
 Identities = 62/259 (23%), Positives = 107/259 (41%), Gaps = 29/259 (11%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
                 ++TGG+ GIG+    L   +    ++  DIQ     +           ++  D+
Sbjct: 2   NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLK--------FIKADL 53

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T +  +  ++D         D +F NAGI      ++ D+D  +  ++  +NV      +
Sbjct: 54  TKQQDITNVLDIIK--NVSFDGIFLNAGI--LIKGSIFDIDIESIKKVLDLNVWSSIYFI 109

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K     +  G    SIV   S            Y +SK A+  + +S ++ L  + IRVN
Sbjct: 110 KGLENNLKVGA---SIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVN 166

Query: 193 CVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFL 242
            V P  + T L         +  G+  DE +K  E + PL     R      +A+ V+FL
Sbjct: 167 TVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLN----RIAQPQEIAELVIFL 222

Query: 243 ACRDSEFVTGHDLVVDGGF 261
               S+F+TG  + +DGG+
Sbjct: 223 LSDKSKFMTGGLIPIDGGY 241

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score =  230 bits (589), Expect = 6e-76
 Identities = 80/256 (31%), Positives = 121/256 (47%), Gaps = 17/256 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           +L+GK AIITG  +GIG+  A  FA  GA  +V++DI  +    V   I    G+     
Sbjct: 8   RLDGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACR 66

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CD+T+E ++ AL D  +   G++DI+ +NAG          D+  + F R + +NV    
Sbjct: 67  CDITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRRAYELNVFSFF 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              +  A  M + G  G I+   S+A        T Y  SK A   LVR+ +  LG   I
Sbjct: 124 HLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNI 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
           RVN ++P  + T        +   E+E+     TP+     R G    +A+A LFL    
Sbjct: 183 RVNGIAPGAILTDAL--KSVIT-PEIEQKMLQHTPIR----RLGQPQDIANAALFLCSPA 235

Query: 247 SEFVTGHDLVVDGGFL 262
           + +V+G  L V GG +
Sbjct: 236 ASWVSGQILTVSGGGV 251

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score =  229 bits (587), Expect = 2e-75
 Identities = 83/271 (30%), Positives = 113/271 (41%), Gaps = 25/271 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------- 62
           KLEG+VA ITG A G G   A   A  GA  I+  DI  +L   V               
Sbjct: 8   KLEGRVAFITGAARGQGRAHAVRMAAEGAD-IIAVDIAGKLPSCVPYDPASPDDLSETVR 66

Query: 63  ------GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
                  +      D  +  +++ +VD  V   G+LDI+ +NAG+ +   Q   D+    
Sbjct: 67  LVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAA--PQAWDDITPED 124

Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           F  +  INV G    V   A  ++EGG  GSI+  +S AG         Y  SKHAV GL
Sbjct: 125 FRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGL 184

Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLT------CHAYGMPADEVEKLFEPQTPLEGVVL 230
            R+ + +LG H IRVN V P  + TP+            M  +               V 
Sbjct: 185 ARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP-DWVA 243

Query: 231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
               +AD V +LA  +S  VT   + VD G 
Sbjct: 244 EPEDIADTVCWLASDESRKVTAAQIPVDQGS 274

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score =  227 bits (581), Expect = 1e-74
 Identities = 79/259 (30%), Positives = 125/259 (48%), Gaps = 16/259 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           +L+ +VAI+TGGA  IG       A+ GAR ++IAD+ + +  +    + +       V 
Sbjct: 10  RLDNRVAIVTGGAQNIGLACVTALAEAGAR-VIIADLDEAMATKAVEDLRMEGHDVSSVV 68

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVTN   V+  V S  +  G++DI+ + AGI   S+    D+    + +   IN+ GM 
Sbjct: 69  MDVTNTESVQNAVRSVHEQEGRVDILVACAGI-CISEVKAEDMTDGQWLKQVDINLNGMF 127

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGK--RRTDYHMSKHAVIGLVRSASVQLGVH 187
              +   R+M+E   +G IV   S++G    +  ++  Y+ SK  V   +RS + +   H
Sbjct: 128 RSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPH 186

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
           GIR N V+P  + T LT      P  E+   +   TP+     R G    VA  V FLA 
Sbjct: 187 GIRANAVAPTYIETTLTRFGMEKP--ELYDAWIAGTPMG----RVGQPDEVASVVQFLAS 240

Query: 245 RDSEFVTGHDLVVDGGFLI 263
             +  +TG  + VD GF +
Sbjct: 241 DAASLMTGAIVNVDAGFTV 259

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score =  227 bits (580), Expect = 3e-74
 Identities = 80/268 (29%), Positives = 124/268 (46%), Gaps = 26/268 (9%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-----GVGKC 65
            +   K  IITG ++GIG TTA LFA  GA  + I     E   +    I        + 
Sbjct: 2   PRFSNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSERLEETRQIILKSGVSEKQV 60

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGIL--SSSDQTVLDLDFSAFDRLFAI 123
           + V  DVT E     +++ST++ +G++D++ +NAG     +   T  D     + +   +
Sbjct: 61  NSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKL 120

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           N++ +    K     +V     G IV  +S VAG         Y ++K A+    RS ++
Sbjct: 121 NLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAI 178

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP------QTPLEGVVLRAG--- 233
            L   GIRVN VSP  + T  T +A GMP    +K +          P+      AG   
Sbjct: 179 DLAKFGIRVNSVSPGMVETGFT-NAMGMPDQASQKFYNFMASHKECIPIG----AAGKPE 233

Query: 234 HVADAVLFLACRD-SEFVTGHDLVVDGG 260
           H+A+ +LFLA R+ S ++ G  +V DGG
Sbjct: 234 HIANIILFLADRNLSFYILGQSIVADGG 261

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score =  226 bits (579), Expect = 4e-74
 Identities = 77/270 (28%), Positives = 118/270 (43%), Gaps = 22/270 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------- 62
            L+G+VA ITG A G G + A   A  GA  I+  DI   +   V  +            
Sbjct: 12  SLQGRVAFITGAARGQGRSHAVRLAAEGAD-IIACDICAPVSASVTYAPASPEDLDETAR 70

Query: 63  ------GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
                  K      DV ++  ++ LV   ++ +G+LD++ +NAG+LS     V +L    
Sbjct: 71  LVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLS--WGRVWELTDEQ 128

Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           +D +  +N+ G    ++     M+E G  GSIV  +S AG         Y  SKH +  L
Sbjct: 129 WDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTAL 188

Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLT----CHAYGMPADEVEKLFEPQTPLEGVVLRA 232
             + +++LG +GIRVN + P+ + TP+                   F P        + A
Sbjct: 189 TNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQPNGFMTA 248

Query: 233 GHVADAVLFLACRDSEFVTGHDLVVDGGFL 262
             VAD V +LA   S  +TG  + VD G L
Sbjct: 249 DEVADVVAWLAGDGSGTLTGTQIPVDKGAL 278

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score =  225 bits (577), Expect = 4e-74
 Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 15/269 (5%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           MA + +   +  LE KVA++T    GIG   AR  A  GA  +V++  + E   +   ++
Sbjct: 1   MASTGV-ERRKPLENKVALVTASTDGIGLAIARRLAQDGAH-VVVSSRKQENVDRTVATL 58

Query: 61  GV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
                      C V      + LV   V  +G +DI+ SNA + +     ++D     +D
Sbjct: 59  QGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAV-NPFFGNIIDATEEVWD 117

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           ++  +NV+      K     M + G  GS++  +SV           Y++SK A++GL +
Sbjct: 118 KILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTK 176

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---V 235
           + +V+L    IRVNC++P  + T  +           ++  +    +     R G+    
Sbjct: 177 NLAVELAPRNIRVNCLAPGLIKTNFS--QVLWMDKARKEYMKESLRIR----RLGNPEDC 230

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
           A  V FL   D+ ++TG  +VV GG   R
Sbjct: 231 AGIVSFLCSEDASYITGETVVVGGGTASR 259

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score =  225 bits (576), Expect = 6e-74
 Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 9/254 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYVH 69
           L+GK A+ITG   GIG   AR FA  GAR +V++            ++G       H V 
Sbjct: 18  LDGKRALITGATKGIGADIARAFAAAGAR-LVLSGRDVSELDAARRALGEQFGTDVHTVA 76

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+        L     + +G LD++ +NAGI  S  Q V+D D   FD   A+N+R  A
Sbjct: 77  IDLAEPDAPAELARRAAEAFGGLDVLVNNAGI--SHPQPVVDTDPQLFDATIAVNLRAPA 134

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
                  + MV  G  G+I+  AS A          Y  SK  ++   +  + +LG HGI
Sbjct: 135 LLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGI 194

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           R N V P  + T +    +G            + PL G       V+DAV++LA   +  
Sbjct: 195 RANSVCPTVVLTEMGQRVWGDE--AKSAPMIARIPL-GRFAVPHEVSDAVVWLASDAASM 251

Query: 250 VTGHDLVVDGGFLI 263
           + G D+ VDGG+ +
Sbjct: 252 INGVDIPVDGGYTM 265

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score =  223 bits (570), Expect = 5e-73
 Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 17/256 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
              EGKVA++TG A GIG          GAR + +AD                   ++  
Sbjct: 24  QGFEGKVALVTGAAGGIGGAVVTALRAAGAR-VAVADRAVAGIAADL---------HLPG 73

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+        L  +     G+LDI+ +NAG+   S   + +   + +     +NV     
Sbjct: 74  DLREAAYADGLPGAVAAGLGRLDIVVNNAGV--ISRGRITETTDADWSLSLGVNVEAPFR 131

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A  +M   G  G+IV  AS  G   G     Y ++K A+  L +   +     GIR
Sbjct: 132 ICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIR 190

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKL---FEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           +N V P+ + TP+    +     + ++         PL G +     +AD VLFLA   +
Sbjct: 191 INAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLASDAA 249

Query: 248 EFVTGHDLVVDGGFLI 263
            ++ G  + V+GG  +
Sbjct: 250 RYLCGSLVEVNGGKAV 265

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score =  222 bits (569), Expect = 5e-73
 Identities = 80/256 (31%), Positives = 124/256 (48%), Gaps = 17/256 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
              +GK AI+ GG  G+G  T R   + GA  +++    +    ++    G  + H +  
Sbjct: 4   GNYQGKKAIVIGGTHGMGLATVRRLVEGGAE-VLLTGRNESNIARIREEFG-PRVHALRS 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+ +  ++  L  +  Q  G +D++  NAG+  S  +    +  +++DR FA+N +G   
Sbjct: 62  DIADLNEIAVLGAAAGQTLGAIDLLHINAGV--SELEPFDQVSEASYDRQFAVNTKGAFF 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            V+    ++ EGG   SIV T+SVA   G    + Y  SK A++      + +L   GIR
Sbjct: 120 TVQRLTPLIREGG---SIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIR 176

Query: 191 VNCVSPHGLATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           VN VSP  + TP    A    A   E + L +  TP++    R G    VA AVLFLA  
Sbjct: 177 VNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMK----RNGTADEVARAVLFLA-F 231

Query: 246 DSEFVTGHDLVVDGGF 261
           ++ F TG  L VDGG 
Sbjct: 232 EATFTTGAKLAVDGGL 247

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score =  223 bits (570), Expect = 6e-73
 Identities = 72/257 (28%), Positives = 115/257 (44%), Gaps = 17/257 (6%)

Query: 11  NKLEGKVAIITGGA-SGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCH 66
             L+GKV ++T  A +GIG TTAR     GA  +VI+D  +    +    +   G+G+  
Sbjct: 18  GLLKGKVVLVTAAAGTGIGSTTARRALLEGAD-VVISDYHERRLGETRDQLADLGLGRVE 76

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            V CDVT+   V AL+  TV+  G+LD++ +NAG+       V+D+    +DR+  + + 
Sbjct: 77  AVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGL--GGQTPVVDMTDEEWDRVLNVTLT 134

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            +    + A R        G IV  ASV G      ++ Y  +K  V+ L R ++++   
Sbjct: 135 SVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVE 194

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
            G+R+N VSP               + E+               RA     VA  + FLA
Sbjct: 195 FGVRINAVSPSIARHKFL---EKTSSSELLDRLASDEAFG----RAAEPWEVAATIAFLA 247

Query: 244 CRDSEFVTGHDLVVDGG 260
              S ++TG  + V   
Sbjct: 248 SDYSSYMTGEVVSVSSQ 264

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score =  222 bits (568), Expect = 3e-72
 Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 26/277 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------- 62
           K+EGKVA ITG A G G + A   A  GA  I+  D+  +L                   
Sbjct: 25  KVEGKVAFITGAARGQGRSHAITLAREGAD-IIAIDVCKQLDGVKLPMSTPDDLAETVRQ 83

Query: 63  -----GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAF 117
                 +      DV +   ++A VD  V   G+LDI+ +NA + S     +  +D   +
Sbjct: 84  VEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTW 142

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
             +  +N+ G     + A   ++ G   GSIV T+S+ G  G +   +Y  SKH + GL+
Sbjct: 143 RDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLM 202

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLT----------CHAYGMPADEVEKLFEPQTPLEG 227
           R+ +++LG   IRVN V P  +ATP+                   ++ +        L  
Sbjct: 203 RTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQMHVLPI 262

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
             +    +++A+LFL   D+ ++TG  L VDGG L++
Sbjct: 263 PYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK 299

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score =  220 bits (563), Expect = 5e-72
 Identities = 60/262 (22%), Positives = 115/262 (43%), Gaps = 26/262 (9%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKCH 66
           + + GKVA++TG A GIG   A      GA+ + + D   E G Q   ++       K  
Sbjct: 3   HMVNGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTL 61

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
           ++ CDV ++ Q++      V ++G+LDI+ +NAG+ +  +          +++   IN+ 
Sbjct: 62  FIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN----------WEKTLQINLV 111

Query: 127 GMAACVKHAARVMVE--GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV-- 182
            + +        M +  GG  G I+  +S+AG     ++  Y  SKH ++G  RSA++  
Sbjct: 112 SVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAA 171

Query: 183 QLGVHGIRVNCVSPHGLATPLT----CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA 238
            L   G+R+N + P  + T +              E +   +        +L    +A+ 
Sbjct: 172 NLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPPLIANG 230

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           ++ L   D+  + G  + +   
Sbjct: 231 LITLIEDDA--LNGAIMKITTS 250

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score =  218 bits (559), Expect = 2e-71
 Identities = 75/259 (28%), Positives = 119/259 (45%), Gaps = 18/259 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           + E KV I+TG   GIG+  A   A  GA  +V+ADI  E    VA  I    G    V 
Sbjct: 6   RFENKVGIVTGSGGGIGQAYAEALAREGAA-VVVADINAEAAEAVAKQIVADGGTAISVA 64

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS-DQTVLDLDFSAFDRLFAINVRGM 128
            DV++    KA+ D T+  +G +D + +NA I        +L +D   + +  ++N+ G 
Sbjct: 65  VDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGA 124

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             C +   + M + G  G+IV  +S A          Y ++K  + GL +  S +LG   
Sbjct: 125 LWCTRAVYKKMTKRG-GGAIVNQSSTAAWLYS---NYYGLAKVGINGLTQQLSRELGGRN 180

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           IR+N ++P  + T         P + V+ + +   PL     R G    +    LFL   
Sbjct: 181 IRINAIAPGPIDTEAN--RTTTPKEMVDDIVK-GLPLS----RMGTPDDLVGMCLFLLSD 233

Query: 246 DSEFVTGHDLVVDGGFLIR 264
           ++ ++TG    VDGG +IR
Sbjct: 234 EASWITGQIFNVDGGQIIR 252

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score =  219 bits (561), Expect = 2e-71
 Identities = 73/300 (24%), Positives = 115/300 (38%), Gaps = 51/300 (17%)

Query: 2   ADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ------------ 49
              SM     +++ KV ++TGGA G G + A   A+ GA  I++ DI             
Sbjct: 1   GPGSM----GRVQDKVVLVTGGARGQGRSHAVKLAEEGAD-IILFDICHDIETNEYPLAT 55

Query: 50  ----DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSS 105
               +E G +V    G  K +    DV +   V   + + V  +G+LD++ +NAGI    
Sbjct: 56  SRDLEEAGLEVE-KTG-RKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLG 113

Query: 106 DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR-- 163
                 L   AF   F ++  G+   V  A   +  G    SI+ T SVAG     +   
Sbjct: 114 A----HLPVQAFADAFDVDFVGVINTVHAALPYLTSGA---SIITTGSVAGLIAAAQPPG 166

Query: 164 ---------TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--- 211
                      Y  +K  V       + QL    IR N + P  + T +   A       
Sbjct: 167 AGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFR 226

Query: 212 -------ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
                    +    F     +    + A  +++AV FLA  +S +VTG    VD G +++
Sbjct: 227 PDLEAPSRADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score =  217 bits (556), Expect = 6e-71
 Identities = 80/260 (30%), Positives = 117/260 (45%), Gaps = 18/260 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L G+ AI+TGG+ GIG   AR     GA  + IAD+     + V   +       V  D
Sbjct: 9   DLSGRKAIVTGGSKGIGAAIARALDKAGAT-VAIADLDVMAAQAVVAGLE-NGGFAVEVD 66

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT    V A +   +   G  D++ +NAG+  S+ +  +D+    +D  F +N RG+   
Sbjct: 67  VTKRASVDAAMQKAIDALGGFDLLCANAGV--STMRPAVDITDEEWDFNFDVNARGVFLA 124

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + A R  +    +G IV TAS+A   G      Y  SK AV G  ++ + ++    IRV
Sbjct: 125 NQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRV 184

Query: 192 NCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLF 241
           NCV P  + T +            GM  + V   +   TPL     R      VAD V+F
Sbjct: 185 NCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLG----RIEEPEDVADVVVF 240

Query: 242 LACRDSEFVTGHDLVVDGGF 261
           LA   + F+TG  + V GG 
Sbjct: 241 LASDAARFMTGQGINVTGGV 260

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score =  217 bits (555), Expect = 9e-71
 Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 13/257 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            LEGKV +ITG ++G+G++ A  FA   A+++V    +++    V   I    G+   V 
Sbjct: 4   DLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVK 63

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVT E  V  LV S ++ +G+LD+M +NAG+   +  +  ++  S ++++   N+ G  
Sbjct: 64  GDVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAF 121

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GI
Sbjct: 122 LGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGI 181

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
           RVN + P  + TP+   A      E     E   P+       G    +A    +LA  +
Sbjct: 182 RVNNIGPGAINTPIN--AEKFADPEQRADVESMIPMG----YIGEPEEIAAVAAWLASSE 235

Query: 247 SEFVTGHDLVVDGGFLI 263
           + +VTG  L  DGG  +
Sbjct: 236 ASYVTGITLFADGGMTL 252

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score =  217 bits (555), Expect = 1e-70
 Identities = 78/287 (27%), Positives = 118/287 (41%), Gaps = 34/287 (11%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M  SS       L GKVA ITG A G G   A   A  GA  I+  D+ D++        
Sbjct: 3   MPRSSE----GPLTGKVAFITGAARGQGRAHAVRLAADGAD-IIAVDLCDQIASVPYPLA 57

Query: 61  GV--------------GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSD 106
                            +      DV +   + A + + +   G+LDI+ +NAGI     
Sbjct: 58  TPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAGI----- 112

Query: 107 QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--- 163
              +      +  +  +N+ G+   +K A   +V+ G  GSIV  +S AG  G       
Sbjct: 113 -APMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPG 171

Query: 164 -TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEK 217
              Y  +KH V+GL+R  +  L    IRVN + P G+ TP+  + +        A   + 
Sbjct: 172 SVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDT 231

Query: 218 LFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
                  +   VL    VA+AV +L    + ++TG  L VD GFL +
Sbjct: 232 PGAMGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK 278

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score =  217 bits (554), Expect = 2e-70
 Identities = 92/258 (35%), Positives = 138/258 (53%), Gaps = 21/258 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
            L GK A+ITG ++GIG+  A  +A+ GA+ + +A    +  + VA  I   G  K   +
Sbjct: 29  DLSGKRALITGASTGIGKKVALAYAEAGAQ-VAVAARHSDALQVVADEIAGVGG-KALPI 86

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDVT   QV+ ++D      G +DI   NAGI   S Q +LD+    F R+   NV G+
Sbjct: 87  RCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGI--VSVQAMLDMPLEEFQRIQDTNVTGV 144

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCG--GKRRTDYHMSKHAVIGLVRSASVQLGV 186
               + AAR MV+ G+ G+I+ TAS++G      ++ + Y  SK AV+ L ++ +V+L  
Sbjct: 145 FLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAP 204

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLA 243
           H IRVN VSP  + T L       P  +   L+EP+ PL     R G   +     L+LA
Sbjct: 205 HQIRVNSVSPGYIRTELV-----EPLADYHALWEPKIPLG----RMGRPEELTGLYLYLA 255

Query: 244 CRDSEFVTGHDLVVDGGF 261
              S ++TG D+V+DGG+
Sbjct: 256 SAASSYMTGSDIVIDGGY 273

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score =  215 bits (549), Expect = 5e-70
 Identities = 79/258 (30%), Positives = 126/258 (48%), Gaps = 17/258 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            L   VAI+TG A+GIG   A  FA  GA  +V+ D++ E    VA +I    GK   + 
Sbjct: 9   HLNDAVAIVTGAAAGIGRAIAGTFAKAGAS-VVVTDLKSEGAEAVAAAIRQAGGKAIGLE 67

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           C+VT+E   +A++ + +  +G++ ++ +NAG          D+  S F+  F +N+  + 
Sbjct: 68  CNVTDEQHREAVIKAALDQFGKITVLVNNAGG---GGPKPFDMPMSDFEWAFKLNLFSLF 124

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + AA  M + G  G+I+  +S+AG     R   Y  SK AV  L R+ +  +G  GI
Sbjct: 125 RLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGI 183

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
           RVN ++P  + T            E+E+     TPL     R G    +A+A LFL    
Sbjct: 184 RVNAIAPGAIKTDALATVLT---PEIERAMLKHTPLG----RLGEAQDIANAALFLCSPA 236

Query: 247 SEFVTGHDLVVDGGFLIR 264
           + +++G  L V GG +  
Sbjct: 237 AAWISGQVLTVSGGGVQE 254

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score =  214 bits (548), Expect = 3e-69
 Identities = 76/258 (29%), Positives = 126/258 (48%), Gaps = 20/258 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIA--DIQDELGRQVATSI---GVGKC 65
            +L+ + A++TGG SGIG   A  +A  GA  + I     ++E  +QV   I   G  K 
Sbjct: 45  GRLKDRKALVTGGDSGIGRAAAIAYAREGAD-VAINYLPAEEEDAQQVKALIEECG-RKA 102

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
             +  D+++E   ++LV    +  G LDI+   AG  ++    + DL    F + FA+NV
Sbjct: 103 VLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAIP-EIKDLTSEQFQQTFAVNV 161

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
             +    + A  ++ +G    SI+ T+S+          DY  +K A++   R  + Q+ 
Sbjct: 162 FALFWITQEAIPLLPKGA---SIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVA 218

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFL 242
             GIRVN V+P  + T L   + G   D++ + F  QTP++    RAG    +A   ++L
Sbjct: 219 EKGIRVNIVAPGPIWTALQ-ISGGQTQDKIPQ-FGQQTPMK----RAGQPAELAPVYVYL 272

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A ++S +VT     V GG
Sbjct: 273 ASQESSYVTAEVHGVCGG 290

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score =  213 bits (545), Expect = 4e-69
 Identities = 63/278 (22%), Positives = 112/278 (40%), Gaps = 24/278 (8%)

Query: 1   MADSSMCNAKNK------LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR 54
           M +S +            L+G  A++TGG+ GIG       A  GAR +      ++   
Sbjct: 1   MEESKVSMMNCNNEGRWSLKGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEKELD 59

Query: 55  QVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVL 110
           +        G        CD+ +  +   L+ +    + G+L+I+ +NAG+     +   
Sbjct: 60  ECLEIWREKG-LNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGV--VIHKEAK 116

Query: 111 DLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK 170
           D     ++ +   N        + A  ++      G+++  +S+AG       + Y  SK
Sbjct: 117 DFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYSASK 175

Query: 171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGV 228
            A+  + +S + +     IRVN V+P  + TPL   A        E    F  +TP+   
Sbjct: 176 GAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG-- 233

Query: 229 VLRAGH---VADAVLFLACRDSEFVTGHDLVVDGGFLI 263
             RAG    V+  + FL    + ++TG  +  DGGF  
Sbjct: 234 --RAGKPQEVSALIAFLCFPAASYITGQIIWADGGFTA 269

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score =  212 bits (542), Expect = 8e-69
 Identities = 61/266 (22%), Positives = 97/266 (36%), Gaps = 23/266 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKCHYV 68
           L   VA++TGG+SGIG  T  L  + GA  +       E  R   +++       +    
Sbjct: 6   LSEAVAVVTGGSSGIGLATVELLLEAGAA-VAFCARDGERLRAAESALRQRFPGARLFAS 64

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDV +  QV+A  ++  +  G   I+ +NAG       T  +    A+     +    +
Sbjct: 65  VCDVLDALQVRAFAEACERTLGCASILVNNAGQ--GRVSTFAETTDEAWSEELQLKFFSV 122

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              V+     +       +IVC  S+  S           ++  V  LVRS + +    G
Sbjct: 123 IHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKG 181

Query: 189 IRVNCVSPHGLATPLT--------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VAD 237
           +RVN +    + +                      +     Q PL     R G     A 
Sbjct: 182 VRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG----RLGKPIEAAR 237

Query: 238 AVLFLACRDSEFVTGHDLVVDGGFLI 263
           A+LFLA   S + TG  + V GG   
Sbjct: 238 AILFLASPLSAYTTGSHIDVSGGLSR 263

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score =  211 bits (540), Expect = 1e-68
 Identities = 78/262 (29%), Positives = 125/262 (47%), Gaps = 21/262 (8%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADI--QDELGRQVATSIGV--GKCHYVHC 70
            KVA++TGGA GIG   +   A  G   I +AD+  Q+E   +    I     K  +V  
Sbjct: 2   SKVAMVTGGAQGIGRGISEKLAADGFD-IAVADLPQQEEQAAETIKLIEAADQKAVFVGL 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT++    + +D   +  G  D++ +NAGI  +  + +L++      +++++NV  +  
Sbjct: 61  DVTDKANFDSAIDEAAEKLGGFDVLVNNAGI--AQIKPLLEVTEEDLKQIYSVNVFSVFF 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            ++ A+R   E GV+G I+  AS+A   G    + Y  +K AV GL ++A+ +L   G  
Sbjct: 119 GIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHT 178

Query: 191 VNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVL 240
           VN  +P  + T +            G P  E  K +     L     R      VA  V 
Sbjct: 179 VNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALG----RPSVPEDVAGLVS 234

Query: 241 FLACRDSEFVTGHDLVVDGGFL 262
           FLA  +S +VTG  ++VDGG L
Sbjct: 235 FLASENSNYVTGQVMLVDGGML 256

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score =  210 bits (538), Expect = 3e-68
 Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 19/258 (7%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           KVA++TG   GIG+  A      G   + IAD  D   + VA+ I    G    V  DV+
Sbjct: 3   KVALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDATAKAVASEINQAGGHAVAVKVDVS 61

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +  QV A V+   +  G  D++ +NAG+  +    +  +     D+++ INV+G+   ++
Sbjct: 62  DRDQVFAAVEQARKTLGGFDVIVNNAGV--APSTPIESITPEIVDKVYNINVKGVIWGIQ 119

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            A     + G  G I+   S AG  G      Y  SK AV GL ++A+  L   GI VN 
Sbjct: 120 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG 179

Query: 194 VSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
             P  + TP+          A G P       F  +  L     R      VA  V +LA
Sbjct: 180 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLG----RLSEPEDVAACVSYLA 235

Query: 244 CRDSEFVTGHDLVVDGGF 261
             DS+++TG  L++DGG 
Sbjct: 236 SPDSDYMTGQSLLIDGGM 253

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score =  210 bits (536), Expect = 3e-68
 Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 12/250 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+  ++TG   GIG  T +     GAR +V           +           V  D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQADLDSLVRECP--GIEPVCVDL 61

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +    +  + S     G +D++ +NA +  +  Q  L++   AFDR F +N+R +    
Sbjct: 62  GDWEATERALGS----VGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  AR ++  GV G+IV  +S          + Y  +K A+  L +  +++LG H IRVN
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+P  + T +    +  P     K    + PL G      HV +A+LFL    S   TG
Sbjct: 176 AVNPTVVMTSMGQATWSDP--HKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDRSGMTTG 232

Query: 253 HDLVVDGGFL 262
             L V+GGF 
Sbjct: 233 STLPVEGGFW 242

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score =  210 bits (538), Expect = 6e-68
 Identities = 62/258 (24%), Positives = 126/258 (48%), Gaps = 20/258 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
            L+GKVA +TG + GIG   A  +A  GA  + I         +        GV      
Sbjct: 31  SLKGKVASVTGSSGGIGWAVAEAYAQAGAD-VAIWYNSHPADEKAEHLQKTYGV-HSKAY 88

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            C++++   V+  +    +++G +D+  +NAG+  +    +   ++ +++++ ++++ G+
Sbjct: 89  KCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGV 148

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCG--GKRRTDYHMSKHAVIGLVRSASVQLGV 186
             C  +  ++  + G +GS++ T+S++G      + +  Y+ +K A   L +S +++   
Sbjct: 149 YYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAP 207

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
              RVN +SP  + T +T  A    + +++  +   TPL     R G    +    L+LA
Sbjct: 208 FA-RVNTISPGYIDTDITDFA----SKDMKAKWWQLTPLG----REGLTQELVGGYLYLA 258

Query: 244 CRDSEFVTGHDLVVDGGF 261
              S F TG D+V+DGG+
Sbjct: 259 SNASTFTTGSDVVIDGGY 276

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score =  208 bits (533), Expect = 1e-67
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 12/250 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
             G  A++TG   GIG  T +     GA+ +V     +     +A          V  D+
Sbjct: 5   FSGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNSDLVSLAKECP--GIEPVCVDL 61

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +    +  +       G +D++ +NA +     Q  L++   AFDR F++N+R +    
Sbjct: 62  GDWDATEKALGG----IGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVS 115

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  AR M+  GV GSIV  +S+           Y  +K A+  L ++ +++LG H IRVN
Sbjct: 116 QMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVN 175

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+P  + T +       P  E  +  + + PL         V +++LFL    S   +G
Sbjct: 176 SVNPTVVLTDMGKKVSADP--EFARKLKERHPL-RKFAEVEDVVNSILFLLSDRSASTSG 232

Query: 253 HDLVVDGGFL 262
             ++VD G+L
Sbjct: 233 GGILVDAGYL 242

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score =  209 bits (535), Expect = 2e-67
 Identities = 65/271 (23%), Positives = 115/271 (42%), Gaps = 20/271 (7%)

Query: 3   DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-- 60
            S M   K   EG++A++TGG +G+G   A+  +  G   +VI   + ++    A  I  
Sbjct: 21  QSMMAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYS-VVITGRRPDVLDAAAGEIGG 79

Query: 61  -GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
                   V CDV +  QV AL  +    + +LD++ +NAG  +     + ++ F  ++ 
Sbjct: 80  RTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGS-NVPPVPLEEVTFEQWNG 138

Query: 120 LFAINVRGMAACVKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           + A N+ G   C +HA R+M     R G I+   S++          Y  +KHA+ GL +
Sbjct: 139 IVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTK 198

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HV 235
           S ++   +H I    +     AT +T     M    ++     +   E          H+
Sbjct: 199 STALDGRMHDIACGQIDIGNAATDMTAR---MSTGVLQA--NGEVAAE----PTIPIEHI 249

Query: 236 ADAVLFLACR-DSEFVTGHDL-VVDGGFLIR 264
           A+AV+++A    S  V    +       + R
Sbjct: 250 AEAVVYMASLPLSANVLTMTVMATRMPLVGR 280

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score =  205 bits (523), Expect = 7e-66
 Identities = 67/234 (28%), Positives = 113/234 (48%), Gaps = 10/234 (4%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           +K   K+AI+TG  SG+G   A   A  G   + +A  + +  ++ A  IG      V  
Sbjct: 24  SKTGKKIAIVTGAGSGVGRAVAVALAGAGYG-VALAGRRLDALQETAAEIG-DDALCVPT 81

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+   V+AL  +TV+ +G++D++F+NAG  + +   + DL F+ + ++   N+ G   
Sbjct: 82  DVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFL 140

Query: 131 CVKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
           C + A RVM     R G I+   S++ +        Y  +KHA+ GL +S S+   VH I
Sbjct: 141 CTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDI 200

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
               +      TP+      M A   +   +    +   V+   HVA AV+++A
Sbjct: 201 ACGQIDIGNADTPMAQK---MKAGVPQA--DLSIKV-EPVMDVAHVASAVVYMA 248

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score =  203 bits (520), Expect = 1e-65
 Identities = 63/256 (24%), Positives = 118/256 (46%), Gaps = 14/256 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
           N ++ KV IITGG+SG+G+  A  FA  GAR +VI     E   +    I    G+   V
Sbjct: 2   NAMKEKVVIITGGSSGMGKGMATRFAKEGAR-VVITGRTKEKLEEAKLEIEQFPGQILTV 60

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV N   ++ +++   + +G++DI+ +NA    +      DL  + ++ +  I + G 
Sbjct: 61  QMDVRNTDDIQKMIEQIDEKFGRIDILINNAAG--NFICPAEDLSVNGWNSVINIVLNGT 118

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV-H 187
             C +   +  +E G++G+I+   +      G        +K  V+ + ++ +V+ G  +
Sbjct: 119 FYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKY 178

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
           GIRVN ++P  +          +  +E+ K      PL     R G    +A    +L  
Sbjct: 179 GIRVNAIAPGPIERTGGADKLWIS-EEMAKRTIQSVPLG----RLGTPEEIAGLAYYLCS 233

Query: 245 RDSEFVTGHDLVVDGG 260
            ++ ++ G  + +DGG
Sbjct: 234 DEAAYINGTCMTMDGG 249

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score =  203 bits (519), Expect = 2e-65
 Identities = 77/257 (29%), Positives = 125/257 (48%), Gaps = 16/257 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+G  A +TG  SGIG    R FA  GAR +++ D +     + A  +G      +  D
Sbjct: 8   RLDGACAAVTGAGSGIGLEICRAFAASGAR-LILIDREAAALDRAAQELGAAVAARIVAD 66

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT+   + A      +    + I+ ++AGI  +     L+ D + + ++ A+NV GM   
Sbjct: 67  VTDAEAMTAAAA-EAEAVAPVSILVNSAGI--ARLHDALETDDATWRQVMAVNVDGMFWA 123

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD--YHMSKHAVIGLVRSASVQLGVHGI 189
            +   R MV  G  G+IV   S++G+   + +    Y  SK AV  L R+ + +    G+
Sbjct: 124 SRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGV 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
           RVN ++P  +AT +T      P  E+ + +   TP+     R G    +A A LFLA   
Sbjct: 183 RVNALAPGYVATEMTLKMRERP--ELFETWLDMTPMG----RCGEPSEIAAAALFLASPA 236

Query: 247 SEFVTGHDLVVDGGFLI 263
           + +VTG  L VDGG+ +
Sbjct: 237 ASYVTGAILAVDGGYTV 253

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score =  203 bits (519), Expect = 2e-65
 Identities = 59/260 (22%), Positives = 107/260 (41%), Gaps = 22/260 (8%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKC 65
            ++ L  ++ ++TG + GIG   A  +A +GA  +++    +E  RQVA+ I      + 
Sbjct: 6   KQDLLNDRIILVTGASDGIGREAAMTYARYGAT-VILLGRNEEKLRQVASHINEETGRQP 64

Query: 66  HYVHCD--VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
            +   D         + L      NY +LD +  NAG+L      + + +   +  +  +
Sbjct: 65  QWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQV 123

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           NV       +    ++++    GS+V T+S  G  G      Y  SK A  G+++  + +
Sbjct: 124 NVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADE 182

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
                +RVNC++P G  T +   A+  P ++ +KL  P             +    L+L 
Sbjct: 183 YQ-QRLRVNCINPGGTRTAMRASAF--PTEDPQKLKTPAD-----------IMPLYLWLM 228

Query: 244 CRDSEFVTGHDLVVDGGFLI 263
             DS   TG       G   
Sbjct: 229 GDDSRRKTGMTFDAQPGRKP 248

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score =  203 bits (518), Expect = 3e-65
 Identities = 66/264 (25%), Positives = 112/264 (42%), Gaps = 20/264 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
             L+GK  +ITG + GIG  TARLFA  GA++ +          +   S+    G   + 
Sbjct: 3   PDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFF 62

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+      + LVD  V  +G +D++ +NAG L    + + ++D + +D +   N+R +
Sbjct: 63  AADLATSEACQQLVDEFVAKFGGIDVLINNAGGL-VGRKPLPEIDDTFYDAVMDANIRSV 121

Query: 129 AACVKHAARVMVEGGVR----GSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQ 183
               K A   +           +++ T S+AG  GG      Y  +K  +  + ++    
Sbjct: 122 VMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDF 181

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVL 240
               G+R N VSP  + T           D  +++     P+     R G    +A A L
Sbjct: 182 HTKDGVRFNIVSPGTVDTAFHA---DKTQDVRDRISN-GIPMG----RFGTAEEMAPAFL 233

Query: 241 FLACRD-SEFVTGHDLVVDGGFLI 263
           F A    S ++TG  L ++GG   
Sbjct: 234 FFASHLASGYITGQVLDINGGQYK 257

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score =  204 bits (521), Expect = 3e-65
 Identities = 79/260 (30%), Positives = 123/260 (47%), Gaps = 20/260 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI-QDELGRQVATSI---GVGKCH 66
            KL+GK  +ITGG SGIG   +  FA  GA  I IA + ++    +    +   G  KC 
Sbjct: 43  EKLKGKNVLITGGDSGIGRAVSIAFAKEGAN-IAIAYLDEEGDANETKQYVEKEG-VKCV 100

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            +  D+++E   K +V  TV+  G L+I+ +N        Q +  +     ++ F IN+ 
Sbjct: 101 LLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYP-QQGLEYITAEQLEKTFRINIF 159

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                 K A   + +G     I+ TAS+    G +   DY  +K A++   RS S  L  
Sbjct: 160 SYFHVTKAALSHLKQGD---VIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQ 216

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
            GIRVN V+P  + TPL          +V + F    P++    R G    +A A ++LA
Sbjct: 217 KGIRVNGVAPGPIWTPLIPS--SFDEKKVSQ-FGSNVPMQ----RPGQPYELAPAYVYLA 269

Query: 244 CRDSEFVTGHDLVVDGGFLI 263
             DS +VTG  + V+GG ++
Sbjct: 270 SSDSSYVTGQMIHVNGGVIV 289

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score =  204 bits (522), Expect = 4e-65
 Identities = 82/280 (29%), Positives = 125/280 (44%), Gaps = 31/280 (11%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ----------------DELGR 54
           N+L+GKVA ITG A G G T A   A  GA  IV  D+                  E  R
Sbjct: 42  NRLQGKVAFITGAARGQGRTHAVRLAQDGAD-IVAIDLCRQQPNLDYAQGSPEELKETVR 100

Query: 55  QVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF 114
            V    G  +      DV +   ++A+VD  +  +G +DI+ SN GI +     V+ L  
Sbjct: 101 LV-EEQG-RRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISN--QGEVVSLTD 156

Query: 115 SAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI 174
             +  +   N+ G     +     M+E G  GS++  +S  G  G   ++ Y  SKH V 
Sbjct: 157 QQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQ 216

Query: 175 GLVRSASVQLGVHGIRVNCVSPHGLATPLT----------CHAYGMPADEVEKLFEPQTP 224
           GL+ S + ++G H IRVN V+P  + T +            H      ++  +LF   T 
Sbjct: 217 GLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTL 276

Query: 225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
           L    +    V++AV +LA  ++ ++ G  + VDGG L R
Sbjct: 277 LPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR 316

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score =  202 bits (517), Expect = 5e-65
 Identities = 68/260 (26%), Positives = 114/260 (43%), Gaps = 20/260 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHY 67
            +   +  ++ G    IG   A  FA  GA +++  +   E        I   G      
Sbjct: 4   QRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG-RSALA 62

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  D+TN  +V+A + +    +G++  +   AG L  + +T+ ++D + + ++  +N+  
Sbjct: 63  IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGL-IARKTIAEMDEAFWHQVLDVNLTS 121

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGV 186
           +    K A   M +G   G+IV  +S AG  GG      Y  SK AV+   R  + ++G 
Sbjct: 122 LFLTAKTALPKMAKG---GAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVG- 177

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
             IRVN V P  ++T    H      +  E+     T L+    R G    VA  V FLA
Sbjct: 178 PKIRVNAVCPGMISTTF--HDTFTKPEVRER-VAGATSLK----REGSSEDVAGLVAFLA 230

Query: 244 CRDSEFVTGHDLVVDGGFLI 263
             D+ +VTG    ++GG L 
Sbjct: 231 SDDAAYVTGACYDINGGVLF 250

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score =  202 bits (517), Expect = 5e-65
 Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 19/256 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L GK  ++TG ASGIG     LFA  GA  +V  D ++ L  +   ++   +   V  
Sbjct: 2   GRLSGKTILVTGAASGIGRAALDLFAREGAS-LVAVDREERLLAEAVAALE-AEAIAVVA 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++   V+A+    ++ +G+L  +   AG+  +      +L   A++++  +N+ G   
Sbjct: 60  DVSDPKAVEAVFAEALEEFGRLHGVAHFAGV--AHSALSWNLPLEAWEKVLRVNLTGSFL 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A  V+ EG   GS+V T SVAG  G      Y   K  V+GL R+ +++L   G+R
Sbjct: 118 VARKAGEVLEEG---GSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVR 173

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VN + P  + TP+T    G+P    E+     +PL     RAG    VA A LFL   +S
Sbjct: 174 VNVLLPGLIQTPMT---AGLPPWAWEQEVG-ASPLG----RAGRPEEVAQAALFLLSEES 225

Query: 248 EFVTGHDLVVDGGFLI 263
            ++TG  L VDGG  I
Sbjct: 226 AYITGQALYVDGGRSI 241

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score =  201 bits (514), Expect = 9e-65
 Identities = 77/257 (29%), Positives = 111/257 (43%), Gaps = 15/257 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD-ELGRQVATSIGVGKCHYVH 69
            +L+ K+A+ITGGA+GIG   A  FA  GA  I IAD+           ++G  +   V 
Sbjct: 3   QRLKDKLAVITGGANGIGRAIAERFAVEGAD-IAIADLVPAPEAEAAIRNLG-RRVLTVK 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV+    V+A     +  +G+ DI+ +NAGI         +L F  + + F INV    
Sbjct: 61  CDVSQPGDVEAFGKQVISTFGRCDILVNNAGI--YPLIPFDELTFEQWKKTFEINVDSGF 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              K     M   G  G I+   S       +  T Y  +K A IG  R+ +  LG  GI
Sbjct: 119 LMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGI 177

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLACRD 246
            VN ++P  + T  T       +   + L      +     R      +  A  FLA  D
Sbjct: 178 TVNAIAPSLVRTATT--EASALSAMFDVLPNMLQAIP----RLQVPLDLTGAAAFLASDD 231

Query: 247 SEFVTGHDLVVDGGFLI 263
           + F+TG  L VDGG + 
Sbjct: 232 ASFITGQTLAVDGGMVR 248

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score =  201 bits (514), Expect = 1e-64
 Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 24/265 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYV 68
               K  I+TGG  GIG    R  A  GA  + +         +V   +G     K    
Sbjct: 11  SFVNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEVTEKVGKEFGVKTKAY 69

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CDV+N   V   +     + G +  + +NAG+  S  +   +L    F  ++ +NV G+
Sbjct: 70  QCDVSNTDIVTKTIQQIDADLGPISGLIANAGV--SVVKPATELTHEDFAFVYDVNVFGV 127

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGS-------CGGKRRTDYHMSKHAVIGLVRSAS 181
               +  A++ ++   +GSIV T+S++          G   +  Y+ SK A   LV+  +
Sbjct: 128 FNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLA 187

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADA 238
            +    GIRVN +SP  + T  T H       ++        PL     R      +   
Sbjct: 188 AEWASAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIPLN----RFAQPEEMTGQ 239

Query: 239 VLFLACRDSEFVTGHDLVVDGGFLI 263
            + L    + ++TG +  +DGG LI
Sbjct: 240 AILLLSDHATYMTGGEYFIDGGQLI 264

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score =  202 bits (515), Expect = 2e-64
 Identities = 75/262 (28%), Positives = 120/262 (45%), Gaps = 26/262 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           + EG  AI++GGA G+GE T R     G   +VIAD+  E G+ +A  +G  +  +V  +
Sbjct: 27  QFEGASAIVSGGAGGLGEATVRRLHADGLG-VVIADLAAEKGKALADELG-NRAEFVSTN 84

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGI-----LSSSDQTVLDLDFSAFDRLFAINVR 126
           VT+E  V A +++  Q       + ++ G      +   D +  D+    F +   + + 
Sbjct: 85  VTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMG--GFTKTIDLYLN 142

Query: 127 GMAACVKHAARVMV-----EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
           G     +  A  +      E G RG++V TAS+AG  G   +T Y  +K  VIGL  +A+
Sbjct: 143 GTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAA 202

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADA 238
             L   GIRVN ++P  + TP+      +  +E    F    P      R G     ADA
Sbjct: 203 RDLSSAGIRVNTIAPGTMKTPIME---SVG-EEALAKFAANIPFPK---RLGTPDEFADA 255

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
             FL    + ++ G  + +DG 
Sbjct: 256 AAFLL--TNGYINGEVMRLDGA 275

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score =  202 bits (515), Expect = 3e-64
 Identities = 58/258 (22%), Positives = 106/258 (41%), Gaps = 14/258 (5%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKC 65
             N  +GKVA ITGG +G+G+    L +  GA+  VIA  + ++ +  A  I      K 
Sbjct: 20  PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVLKATAEQISSQTGNKV 78

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
           H + CDV +   V+  V   ++  G  +I+ +NA    +       L  +A+  +  I +
Sbjct: 79  HAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAG--NFISPTERLSPNAWKTITDIVL 136

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G A       + +++     + +   ++    G         +K  V  + +S + + G
Sbjct: 137 NGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWG 196

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFL 242
            +G+R N + P  + T     +   P    EK    + P      R G    +A+   FL
Sbjct: 197 KYGMRFNVIQPGPIKTKGA-FSRLDPTGTFEKEMIGRIPCG----RLGTVEELANLAAFL 251

Query: 243 ACRDSEFVTGHDLVVDGG 260
               + ++ G  +  DGG
Sbjct: 252 CSDYASWINGAVIKFDGG 269

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score =  199 bits (508), Expect = 1e-63
 Identities = 58/271 (21%), Positives = 109/271 (40%), Gaps = 24/271 (8%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIV--IADIQDELGRQVAT 58
           M+ +      + L+ KV +I GG   +G  TA+ FA     +++        +   ++  
Sbjct: 1   MSLTKY----HDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKD 56

Query: 59  SIGV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSA 116
            +     K      D++NE +V  L D   + +G++DI  +  G +    + +++   + 
Sbjct: 57  ELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL--KKPIVETSEAE 114

Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           FD +  IN +     +K AA+ M   G    I+  A+   +      + Y  +K  V   
Sbjct: 115 FDAMDTINNKVAYFFIKQAAKHMNPNG---HIITIATSLLAAYTGFYSTYAGNKAPVEHY 171

Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH-- 234
            R+AS +L    I VN ++P  + T      YG    E     + Q        +     
Sbjct: 172 TRAASKELMKQQISVNAIAPGPMDTSFF---YGQETKESTAFHKSQAMGN----QLTKIE 224

Query: 235 -VADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
            +A  + FL   D  ++ G  +  +GG+  R
Sbjct: 225 DIAPIIKFLT-TDGWWINGQTIFANGGYTTR 254

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score =  198 bits (507), Expect = 1e-63
 Identities = 62/257 (24%), Positives = 104/257 (40%), Gaps = 29/257 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           + + KV +ITG + GIG    R + D   R +V      +              H V  D
Sbjct: 25  RNQQKVVVITGASQGIGAGLVRAYRDRNYR-VVATSRSIKPSAD-------PDIHTVAGD 76

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           ++       +V   ++ +G++D + +NAG+     +  +++    +D    +NV G    
Sbjct: 77  ISKPETADRIVREGIERFGRIDSLVNNAGV--FLAKPFVEMTQEDYDHNLGVNVAGFFHI 134

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH--MSKHAVIGLVRSASVQLGVHGI 189
            + AA  M++ G  G IV   +                ++K  +  + RS +++    G+
Sbjct: 135 TQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGV 193

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
           RVN VSP  + TP+          E         P+     R G    V DAVL+L    
Sbjct: 194 RVNAVSPGVIKTPMH-------PAETHSTLAGLHPVG----RMGEIRDVVDAVLYLE--H 240

Query: 247 SEFVTGHDLVVDGGFLI 263
           + F+TG  L VDGG   
Sbjct: 241 AGFITGEILHVDGGQNA 257

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score =  198 bits (506), Expect = 1e-63
 Identities = 69/259 (26%), Positives = 111/259 (42%), Gaps = 12/259 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+GK A++TG  SGIG   A++ A  GA  IV+    D        +    K  +   D+
Sbjct: 2   LKGKTALVTGSTSGIGLGIAQVLARAGAN-IVLNGFGDPAPALAEIARHGVKAVHHPADL 60

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           ++  Q++AL     + +G +DI+ +NAGI       V      ++D++ A+N+  +    
Sbjct: 61  SDVAQIEALFALAEREFGGVDILVNNAGI--QHVAPVEQFPLESWDKIIALNLSAVFHGT 118

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           + A   M      G I+  ASV G  G   +  Y  +KH V+GL +   ++     +  N
Sbjct: 119 RLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCN 177

Query: 193 CVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            + P  + TPL            G P      L   + P     +   H+ + VLFL   
Sbjct: 178 AICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPS-LAFVTPEHLGELVLFLCSE 236

Query: 246 DSEFVTGHDLVVDGGFLIR 264
               V G    VDGG+L +
Sbjct: 237 AGSQVRGAAWNVDGGWLAQ 255

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score =  198 bits (506), Expect = 2e-63
 Identities = 65/258 (25%), Positives = 105/258 (40%), Gaps = 15/258 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEG  A++TGG+ GIG       A  GA  +       +      T       K     C
Sbjct: 7   LEGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQKELNDCLTQWRSKGFKVEASVC 65

Query: 71  DVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           D+++  + + L+++   ++ G+L+I+ +NAGI     +   D     +  + +IN     
Sbjct: 66  DLSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFEAAY 123

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
                A   +     RG++V  +SV+G+        Y  +K A+  L R  + +     I
Sbjct: 124 HLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 182

Query: 190 RVNCVSPHGLATPLTCHAYGMPA-DEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           RVN V P  +AT L       P   E       +  L     R G    +A  V FL   
Sbjct: 183 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR----RMGEPKELAAMVAFLCFP 238

Query: 246 DSEFVTGHDLVVDGGFLI 263
            + +VTG  + VDGG + 
Sbjct: 239 AASYVTGQIIYVDGGLMA 256

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score =  199 bits (507), Expect = 2e-63
 Identities = 66/266 (24%), Positives = 118/266 (44%), Gaps = 17/266 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI-QDELGRQVATSIGV---GKCH 66
             +  K A+ITG  SGIG   AR  A  GA  IV+      +  R V   +     G   
Sbjct: 21  QSMMTKTAVITGSTSGIGLAIARTLAKAGAN-IVLNGFGAPDEIRTVTDEVAGLSSGTVL 79

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
           +   D+T   ++  ++      +G  DI+ +NAG+     + + D     +DR+ A+N+ 
Sbjct: 80  HHPADMTKPSEIADMMAMVADRFGGADILVNNAGV--QFVEKIEDFPVEQWDRIIAVNLS 137

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                ++ A   M + G  G I+  AS  G      ++ Y  +KH ++GL ++ ++++  
Sbjct: 138 SSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAE 196

Query: 187 HGIRVNCVSPHGLATPLT-------CHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVADA 238
            G+ VN + P  + TPL            G+  ++V  ++     P     +    VA  
Sbjct: 197 SGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFITVEQVASL 255

Query: 239 VLFLACRDSEFVTGHDLVVDGGFLIR 264
            L+LA  D+  +TG  + +DGG+  +
Sbjct: 256 ALYLAGDDAAQITGTHVSMDGGWTAQ 281

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score =  197 bits (504), Expect = 3e-63
 Identities = 39/254 (15%), Positives = 80/254 (31%), Gaps = 31/254 (12%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
           +     K  ++ GG+  +G    + F        +  D ++      +            
Sbjct: 17  RGSHMSKNILVLGGSGALGAEVVKFFKSKSWN-TISIDFRENPNADHS----------FT 65

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
              + E ++K++++       ++D     AG   S      D    +   +  +N+    
Sbjct: 66  IKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGW-SGGNASSDEFLKSVKGMIDMNLYSAF 124

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--H 187
           A     A+++ +G   G  V T + A          Y  +K A   +++  + + G    
Sbjct: 125 ASAHIGAKLLNQG---GLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPA 181

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL-FLACRD 246
           G     + P  L TP       M     +      TPL         VA+ +  +    D
Sbjct: 182 GSTSLGILPVTLDTPTN--RKYMSDANFDDW----TPLS-------EVAEKLFEWSTNSD 228

Query: 247 SEFVTGHDLVVDGG 260
           S    G  +  +  
Sbjct: 229 SRPTNGSLVKFETK 242

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score =  197 bits (503), Expect = 4e-63
 Identities = 66/258 (25%), Positives = 97/258 (37%), Gaps = 25/258 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
              GK   +TG   GIG  TA  F + GA++        +     AT            D
Sbjct: 4   DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPFAT---------EVMD 54

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +  QV  +    +    +LD + + AGIL         L    + + FA+NV G    
Sbjct: 55  VADAAQVAQVCQRLLAETERLDALVNAAGILR--MGATDQLSKEDWQQTFAVNVGGAFNL 112

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +            G+IV  AS A        + Y  SK A+  L  S  ++L   G+R 
Sbjct: 113 FQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRC 171

Query: 192 NCVSPHGLATPLT------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFL 242
           N VSP    T +         A         + F+   PL     +      +A+ +LFL
Sbjct: 172 NVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLG----KIARPQEIANTILFL 227

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   +  +T  D+VVDGG
Sbjct: 228 ASDLASHITLQDIVVDGG 245

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score =  196 bits (502), Expect = 5e-63
 Identities = 46/252 (18%), Positives = 86/252 (34%), Gaps = 15/252 (5%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
            +A++T      G          G   +V  D       +        +          E
Sbjct: 2   VIALVTHARHFAGPAAVEALTQDGYT-VVCHDASFADAAERQ----RFESENPGTIALAE 56

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT-VLDLDFSAFDRLFAINVRGMAACVKH 134
            + + LVD+T+Q+   +D + SN  I    ++  +     +   ++F          ++ 
Sbjct: 57  QKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQS 116

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
           A   +   G   S++   S  G         Y  ++ A + LV SA+  L   GI +  +
Sbjct: 117 AIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILLYAI 175

Query: 195 SPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSEFV 250
            P+    P          + E+ +  +   PL     R G    +   + FLA R +  +
Sbjct: 176 GPNFFNNPTYFPTSDWENNPELRERVDRDVPLG----RLGRPDEMGALITFLASRRAAPI 231

Query: 251 TGHDLVVDGGFL 262
            G      GG+L
Sbjct: 232 VGQFFAFTGGYL 243

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score =  197 bits (502), Expect = 2e-62
 Identities = 65/262 (24%), Positives = 112/262 (42%), Gaps = 19/262 (7%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV------ 62
           A   L+G+VAI+TGGA+GIG+   +   + G+  +VIA  + E  +  A  +        
Sbjct: 12  APGLLQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLKSAADELQANLPPTK 70

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
             +   + C++ NE +V  LV ST+  +G+++ + +N G           +    +  + 
Sbjct: 71  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG--QFLSPAEHISSKGWHAVL 128

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
             N+ G     K      ++    GSIV    V    G         ++  V  L +S +
Sbjct: 129 ETNLTGTFYMCKAVYSSWMKEH-GGSIV-NIIVPTKAGFPLAVHSGAARAGVYNLTKSLA 186

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADA 238
           ++    GIR+NCV+P  + +      YG       +    + P +    R G    V+  
Sbjct: 187 LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAK----RIGVPEEVSSV 242

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           V FL    + F+TG  + VDGG
Sbjct: 243 VCFLLSPAASFITGQSVDVDGG 264

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score =  195 bits (498), Expect = 3e-62
 Identities = 60/256 (23%), Positives = 112/256 (43%), Gaps = 16/256 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L GK A++TG A G+G   A   A  GAR +++ DI+  L  +   ++       H V  
Sbjct: 7   LTGKTALVTGSARGLGFAYAEGLAAAGAR-VILNDIRATLLAESVDTLTRKGYDAHGVAF 65

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+E  ++A           +DI+ +NAGI     + +++L+   + ++   N+     
Sbjct: 66  DVTDELAIEAAFSKLDAEGIHVDILINNAGI--QYRKPMVELELENWQKVIDTNLTSAFL 123

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + AA+ M+     G I+   S+           Y  +K  +  L  S + +     I+
Sbjct: 124 VSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQ 183

Query: 191 VNCVSPHGLATPLTCHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVAD---AVLFLACRD 246
            N + P  + T +      +  D+  +   +  TP +    R G   +     +FL+ + 
Sbjct: 184 TNAIGPGYILTDMN---TALIEDKQFDSWVKSSTPSQ----RWGRPEELIGTAIFLSSKA 236

Query: 247 SEFVTGHDLVVDGGFL 262
           S+++ G  + VDGG+L
Sbjct: 237 SDYINGQIIYVDGGWL 252

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score =  193 bits (493), Expect = 2e-61
 Identities = 72/264 (27%), Positives = 124/264 (46%), Gaps = 24/264 (9%)

Query: 12  KLEGKVAIITG--GASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKC 65
            L+GKV ++TG  G  G+G   AR  A+ GA + +    + +   +    +    G+ K 
Sbjct: 17  SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGI-KA 75

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
               C V +    + LV   V ++GQ+D   +NAG   ++D  +LD    A++ +  +++
Sbjct: 76  KAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGA--TADSGILDGSVEAWNHVVQVDL 133

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG--GKRRTDYHMSKHAVIGLVRSASVQ 183
            G   C K       E G  GS+V TAS++G      + +T Y+++K   I + RS + +
Sbjct: 134 NGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANE 192

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVL 240
                 RVN +SP  + T L+         E ++L+    P+     R G    +  A +
Sbjct: 193 WR-DFARVNSISPGYIDTGLSDFV----PKETQQLWHSMIPMG----RDGLAKELKGAYV 243

Query: 241 FLACRDSEFVTGHDLVVDGGFLIR 264
           + A   S + TG DL++DGG+  R
Sbjct: 244 YFASDASTYTTGADLLIDGGYTTR 267

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score =  193 bits (492), Expect = 2e-61
 Identities = 71/264 (26%), Positives = 115/264 (43%), Gaps = 17/264 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD-ELGRQVATSIGV---GKCHYV 68
           L+GKVA++TG  SGIG   A   A  GA  IV+    D     +V   +      K  Y 
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGAD-IVLNGFGDAAEIEKVRAGLAAQHGVKVLYD 60

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D++    V+ LVD+ V+  G++DI+ +NAGI       + D     +D + A+N+  +
Sbjct: 61  GADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAV 118

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
                 A   M + G  G I+  AS  G      ++ Y  +KH V+G  +  +++    G
Sbjct: 119 FHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQG 177

Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEV-EKLFEPQTPLEGVVLRAGHVADAVL 240
           I  N + P  + TPL            G+  +    +L   + P     +    +    +
Sbjct: 178 ITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAV 236

Query: 241 FLACRDSEFVTGHDLVVDGGFLIR 264
           FLA   +  +TG  + VDGG+  R
Sbjct: 237 FLASDAAAQITGTTVSVDGGWTAR 260

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score =  192 bits (491), Expect = 4e-61
 Identities = 62/254 (24%), Positives = 114/254 (44%), Gaps = 16/254 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
            + K A++TG + G+G+  A   A++G  +++      +   + A  I   G  K   V 
Sbjct: 2   EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLG-VKVLVVK 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            +V    ++K +     + +G+LD+  +NA       + V++L+ + +D    IN + + 
Sbjct: 61  ANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS--GVLRPVMELEETHWDWTMNINAKALL 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            C + AA++M + G  G IV  +S+      +  T   +SK A+  L R  +V+L    I
Sbjct: 119 FCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQI 177

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
            VN VS   + T    H      +++ +     TP      R      + D V FL    
Sbjct: 178 IVNAVSGGAIDTDALKHF--PNREDLLEDARQNTPAG----RMVEIKDMVDTVEFLVSSK 231

Query: 247 SEFVTGHDLVVDGG 260
           ++ + G  ++VDGG
Sbjct: 232 ADMIRGQTIIVDGG 245

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score =  193 bits (492), Expect = 4e-61
 Identities = 72/258 (27%), Positives = 109/258 (42%), Gaps = 15/258 (5%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKC 65
             + L  KVA ITGG SGIG   A +F  HG    VIA          A  +      +C
Sbjct: 21  CPDLLRDKVAFITGGGSGIGFRIAEIFMRHGCH-TVIASRSLPRVLTAARKLAGATGRRC 79

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
             +  DV     V A VD  ++ +G++DI+ + A    +       L F+AF  +  I+ 
Sbjct: 80  LPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAG--NFLCPAGALSFNAFKTVMDIDT 137

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
            G     +            G IV   +  G+ G   +     +K AV  + R  +V+ G
Sbjct: 138 SGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWG 196

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFL 242
              IRVN ++P  ++        G P   +       +PL+    R G+   +A +VL+L
Sbjct: 197 PQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVT-ASPLQ----RLGNKTEIAHSVLYL 251

Query: 243 ACRDSEFVTGHDLVVDGG 260
           A   + +VTG  LV DGG
Sbjct: 252 ASPLASYVTGAVLVADGG 269

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score =  191 bits (489), Expect = 8e-61
 Identities = 67/269 (24%), Positives = 114/269 (42%), Gaps = 18/269 (6%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           MA +   + +  L+ K  ++TGG  GIG      FA  GA  I      +    +  +  
Sbjct: 1   MAGAEQ-SQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEYELNECLSKW 58

Query: 61  GV--GKCHYVHCDVTNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAF 117
                +     CD +   + + L+ +    +G +LDI+ +N G      +  LD     F
Sbjct: 59  QKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGA--IRSKPTLDYTAEDF 116

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
               + N+       + A  ++   G  G+I+  +S+AG       + Y  +K A+  L 
Sbjct: 117 SFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYSATKGALNQLA 175

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH--- 234
           R+ + +    GIR N V+P  +ATPL      +  DE +K+   + PL     R G    
Sbjct: 176 RNLACEWASDGIRANAVAPAVIATPLAEA---VYDDEFKKVVISRKPLG----RFGEPEE 228

Query: 235 VADAVLFLACRDSEFVTGHDLVVDGGFLI 263
           V+  V FL    + ++TG  + VDGG  +
Sbjct: 229 VSSLVAFLCMPAASYITGQTICVDGGLTV 257

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score =  192 bits (491), Expect = 1e-60
 Identities = 63/244 (25%), Positives = 109/244 (44%), Gaps = 10/244 (4%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV- 62
            SM    +  +G+ A++TGGASGIG  TA  FA  GAR +V++D+      Q    +   
Sbjct: 20  GSMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGAR-LVLSDVDQPALEQAVNGLRGQ 78

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
               H V CDV +  ++  L D   +  G +D++FSNAGI       +  ++   +  + 
Sbjct: 79  GFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGI--VVAGPLAQMNHDDWRWVI 136

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            I++ G    V+     ++E G  G I  TAS AG         Y ++K+ V+GL  + +
Sbjct: 137 DIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLA 196

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG-----HVA 236
            ++  +GI V+ + P  + T L  ++  +   +      P+     +  +        VA
Sbjct: 197 REVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVA 256

Query: 237 DAVL 240
               
Sbjct: 257 RLTA 260

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score =  190 bits (485), Expect = 2e-60
 Identities = 53/256 (20%), Positives = 78/256 (30%), Gaps = 21/256 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVH 69
            L  K  I      GIG  T+R       +  VI D  +                  +  
Sbjct: 2   DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHT 61

Query: 70  CDVTNEC-QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            DVT    + K L+         +DI+ + AGIL               +R  AIN  G+
Sbjct: 62  YDVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQ----------IERTIAINFTGL 111

Query: 129 AACVKHAARVMVE--GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                       +  GG  G I    SV G     +   Y  SK AV+    S +    +
Sbjct: 112 VNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPI 171

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            G+    ++P    TPL  H +    D   ++ E    L      +       +      
Sbjct: 172 TGVTAYSINPGITRTPLV-HTFNSWLDVEPRVAE--LLLSHPTQTSEQCGQNFVKAI--- 225

Query: 247 SEFVTGHDLVVDGGFL 262
                G    +D G L
Sbjct: 226 EANKNGAIWKLDLGTL 241

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score =  191 bits (487), Expect = 3e-60
 Identities = 77/279 (27%), Positives = 116/279 (41%), Gaps = 32/279 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ----------------DELGRQ 55
             EGK A+ITGGA G+G + A   A+ GA  I I D                   E    
Sbjct: 7   DFEGKTALITGGARGMGRSHAVALAEAGAD-IAICDRCENSDVVGYPLATADDLAETVAL 65

Query: 56  VATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFS 115
           V    G  +C     DV +   +++ V       G +DI  +NAGI +     + +++ +
Sbjct: 66  V-EKTG-RRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGIST--IALLPEVESA 121

Query: 116 AFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            +D +   N+ G    +   A  M++    G IV  +S+ G      +  Y  SK  VIG
Sbjct: 122 QWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSMLGHSANFAQASYVSSKWGVIG 180

Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA----------DEVEKLFEPQTPL 225
           L + A+  L  +GI VN V+P  + TP+T + +               +VE +F      
Sbjct: 181 LTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ 240

Query: 226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR 264
               L+   V  AVLFL    S  +TG  L +D G   R
Sbjct: 241 YAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score =  190 bits (484), Expect = 4e-60
 Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 22/265 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
            + GKVA+ITG +SGIG   A  FA  GA  IV+   Q +   + A S+      +   V
Sbjct: 4   GISGKVAVITGSSSGIGLAIAEGFAKEGAH-IVLVARQVDRLHEAARSLKEKFGVRVLEV 62

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV     V A+V+S   ++G  DI+ +NAG    S++T+++     +   + + V   
Sbjct: 63  AVDVATPEGVDAVVESVRSSFGGADILVNNAGT--GSNETIMEAADEKWQFYWELLVMAA 120

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               +     M   G  G+I+  AS+           Y+++K A++   ++ + ++    
Sbjct: 121 VRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDN 179

Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEVEK-LFEPQTPLEGVVLRAGH---VAD 237
           IRVNC++P  + TP             G       + + +   P++    R      +A+
Sbjct: 180 IRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIK----RFASPEELAN 235

Query: 238 AVLFLACRDSEFVTGHDLVVDGGFL 262
             +FL    + +  G    VDGG L
Sbjct: 236 FFVFLCSERATYSVGSAYFVDGGML 260

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score =  189 bits (483), Expect = 5e-60
 Identities = 58/253 (22%), Positives = 99/253 (39%), Gaps = 22/253 (8%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-----VG 63
               L+G+V ++TG A GIG   AR +A HGA  +V+    +    +V+  I        
Sbjct: 8   HPELLKGRVILVTGAARGIGAAAARAYAAHGAS-VVLLGRTEASLAEVSDQIKSAGQPQP 66

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
               ++ +     Q + L       +G+LD +  NA I+      +  L    F ++  +
Sbjct: 67  LIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHV 125

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           NV       +    ++       SI  T+S  G  G      Y +SK A  GL+++ + +
Sbjct: 126 NVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADE 184

Query: 184 L-GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           L GV  +R N ++P    T +   A   P +       P+            +    L+L
Sbjct: 185 LEGVTAVRANSINPGATRTGMR--AQAYPDENPLNNPAPED-----------IMPVYLYL 231

Query: 243 ACRDSEFVTGHDL 255
              DS  + G  L
Sbjct: 232 MGPDSTGINGQAL 244

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score =  187 bits (478), Expect = 3e-59
 Identities = 78/272 (28%), Positives = 121/272 (44%), Gaps = 28/272 (10%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           MA +        ++G VA+ITGGASG+G  TA      GA   V+ D+ +  G   A  +
Sbjct: 3   MAAACR-----SVKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEAQAKKL 56

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI------LSSSDQTVLDLDF 114
           G   C +   DVT+E  V+  +      +G++D+  + AGI       +        L+ 
Sbjct: 57  G-NNCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLE- 114

Query: 115 SAFDRLFAINVRGMAACVKHAARVMV-----EGGVRGSIVCTASVAGSCGGKRRTDYHMS 169
             F R+  +N+ G    ++  A  M      +GG RG I+ TASVA   G   +  Y  S
Sbjct: 115 -DFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSAS 173

Query: 170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV 229
           K  ++G+    +  L   GIRV  ++P    TPL      +P ++V      Q P     
Sbjct: 174 KGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLT---SLP-EKVCNFLASQVPFPS-- 227

Query: 230 LRAGHVAD-AVLFLACRDSEFVTGHDLVVDGG 260
            R G  A+ A L  A  ++ F+ G  + +DG 
Sbjct: 228 -RLGDPAEYAHLVQAIIENPFLNGEVIRLDGA 258

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score =  188 bits (479), Expect = 4e-59
 Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 14/261 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
            +    VAI+TGG  GIG   AR  A  G  + +      E    V   +     +  ++
Sbjct: 25  TQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+ +    +A VD+ V  +G++D + +NAGI S      LDL    FD +  +N+RG 
Sbjct: 85  RADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGT 144

Query: 129 AACVKHAARVMVEGGVR--GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
               +   + M+    R   SI+   SV+       R DY MSK  +    +  +++L  
Sbjct: 145 VFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAE 204

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
            GI V  V P  + + +T     +       +     P+     R G    + + V  LA
Sbjct: 205 TGIAVFEVRPGIIRSDMTA---AVSGKYDGLIESGLVPMR----RWGEPEDIGNIVAGLA 257

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
                F TG  +  DGG  I 
Sbjct: 258 GGQFGFATGSVIQADGGLSIG 278

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score =  187 bits (476), Expect = 4e-59
 Identities = 57/257 (22%), Positives = 112/257 (43%), Gaps = 18/257 (7%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVI--ADIQDELGRQVATSIGVGKCHYVHCDV 72
           GKV ++TG + GIG++   +        +V   A  +  L +++    G  +  YV  D+
Sbjct: 2   GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPL-KKLKEKYG-DRFFYVVGDI 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T +  +K LV++ V+ +G++D + +NAG+L    Q V ++D +A+ +L+ IN   + + V
Sbjct: 60  TEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLV 118

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
             A   + +    G++V  +S A +        Y  SK A+     + + +     ++  
Sbjct: 119 GIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAI 174

Query: 193 CVSPHGLATPLT------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
            V+P  + T +            M A++++  F         +L +   A     LA   
Sbjct: 175 AVAPGIVDTDMQVNIRENVGPSSMSAEQLKM-FRGLKEN-NQLLDSSVPATVYAKLALHG 232

Query: 247 -SEFVTGHDLVVDGGFL 262
             + V G  L  +   L
Sbjct: 233 IPDGVNGQYLSYNDPAL 249

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score =  186 bits (474), Expect = 2e-58
 Identities = 60/262 (22%), Positives = 101/262 (38%), Gaps = 30/262 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------- 62
            L GK   ITG + GIG   A   A  GA  + IA        ++  +I           
Sbjct: 3   TLSGKTLFITGASRGIGLAIALRAARDGAN-VAIAAKSAVANPKLPGTIHSAAAAVNAAG 61

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
           G+   + CD+  E QV+A V +TV  +G +DI+ +NA  +    +  LD     FD +  
Sbjct: 62  GQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAI--WLRGTLDTPMKRFDLMQQ 119

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG--GKRRTDYHMSKHAVIGLVRSA 180
           +N RG   C +     +++      I+  A             T Y ++K  +  +    
Sbjct: 120 VNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGL 178

Query: 181 SVQLGVHGIRVNCVSPHGL-ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV 239
           + + G  G+ +N + P  + AT       G+ A    +   P+            +ADA 
Sbjct: 179 AAEFGPQGVAINALWPRTVIATDAINMLPGVDAAACRR---PE-----------IMADAA 224

Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
             +  R++    G  L+ D   
Sbjct: 225 HAVLTREAAGFHGQFLIDDEVL 246

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score =  185 bits (473), Expect = 2e-58
 Identities = 68/257 (26%), Positives = 119/257 (46%), Gaps = 17/257 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYVH 69
           L G+VA++TGG+ G+G   A+  A+ G   +V+A    E   + A  +      +     
Sbjct: 19  LRGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEEASEAAQKLTEKYGVETMAFR 77

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV+N  +VK L+++  + +G+LD + + AGI  +      +     F ++  +N+ G  
Sbjct: 78  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI--NRRHPAEEFPLDEFRQVIEVNLFGTY 135

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              + A  ++ E     SI+   S+          + Y  SK  V  L ++ + + G +G
Sbjct: 136 YVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYG 194

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACR 245
           IRVN ++P    T +T   +  P  E       + PL     R G   D     +FLA  
Sbjct: 195 IRVNVIAPGWYRTKMTEAVFSDP--EKLDYMLKRIPLG----RTGVPEDLKGVAVFLASE 248

Query: 246 DSEFVTGHDLVVDGGFL 262
           ++++VTG  + VDGG+ 
Sbjct: 249 EAKYVTGQIIFVDGGWT 265

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score =  185 bits (473), Expect = 3e-58
 Identities = 82/260 (31%), Positives = 123/260 (47%), Gaps = 18/260 (6%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCH 66
           ++  +  V ++TGG+ GIG    RL A  G R+ V      E    V  +I   G G+  
Sbjct: 21  QSMSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESG-GEAV 79

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            +  DV N   + A+  +  + +G+LD + +NAGI+    Q V ++     +R+  +NV 
Sbjct: 80  AIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIV-DYPQRVDEMSVERIERMLRVNVT 138

Query: 127 GMAACVKHAARVMVE--GGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSASVQ 183
           G   C   A R M     G  G+IV  +S+A   G   +  DY  SK A+       + +
Sbjct: 139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLARE 198

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVL 240
           +   GIRVN V P  + T L  HA G   D   ++  P  P++    RAG    VADA+L
Sbjct: 199 VAAEGIRVNAVRPGIIETDL--HASGGLPDRAREM-APSVPMQ----RAGMPEEVADAIL 251

Query: 241 FLACRDSEFVTGHDLVVDGG 260
           +L    + +VTG  L V GG
Sbjct: 252 YLLSPSASYVTGSILNVSGG 271

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score =  184 bits (470), Expect = 4e-58
 Identities = 72/261 (27%), Positives = 115/261 (44%), Gaps = 25/261 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ +V I+TG +SG+G    R+ A  GA  ++  D++   G + A  +G     + + D
Sbjct: 4   QLKSRVFIVTGASSGLGAAVTRMLAQEGAT-VLGLDLKPPAGEEPAAELG-AAVRFRNAD 61

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD----LDFSAFDRLFAINVRG 127
           VTNE    A +    Q +G +  + + AG   +  + +L         +F R  A+N+ G
Sbjct: 62  VTNEADATAALAFAKQEFGHVHGLVNCAGT--APGEKILGRSGPHALDSFARTVAVNLIG 119

Query: 128 MAACVKHAARVMV-----EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
               ++ AA VM        G RG IV TAS+A   G   +  Y  SK  V  L   A+ 
Sbjct: 120 TFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAR 179

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAV 239
           +L   GIRV  ++P    TP+     GMP  +V+       P      R G     A  V
Sbjct: 180 ELARFGIRVVTIAPGIFDTPMMA---GMP-QDVQDALAASVPFPP---RLGRAEEYAALV 232

Query: 240 LFLACRDSEFVTGHDLVVDGG 260
             +   ++  + G  + +DG 
Sbjct: 233 KHIC--ENTMLNGEVIRLDGA 251

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score =  184 bits (470), Expect = 7e-58
 Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 24/277 (8%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           +  S   +A   L GKVA+ TG   GIG   A      GA ++V      +   +V   +
Sbjct: 7   ITSSGPSDASKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAEL 66

Query: 61  GV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
                +   +  D++   +V AL D  V ++G LD + SN+G+        L++    FD
Sbjct: 67  KKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGME--VWCDELEVTQELFD 124

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSKHAVIGLV 177
           ++F +N RG     +   +    G   G I+ T+S+A    G      Y  SK AV G  
Sbjct: 125 KVFNLNTRGQFFVAQQGLKHCRRG---GRIILTSSIAAVMTGIPNHALYAGSKAAVEGFC 181

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLT---------CHAYGMPADEVEKLFEPQTPLEGV 228
           R+ +V  G  G+ VNC++P G+ T +              GMP +++++      PL+  
Sbjct: 182 RAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK-- 239

Query: 229 VLRAGH---VADAVLFLACRDSEFVTGHDLVVDGGFL 262
             R G+   +  AV  L   +SE++ G  + + GG +
Sbjct: 240 --RIGYPADIGRAVSALCQEESEWINGQVIKLTGGGI 274

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score =  183 bits (468), Expect = 9e-58
 Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 14/252 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GK A++TG A GIG+  A   A  GA  ++++DI  E  +  A SIG  K   +  D
Sbjct: 3   RLAGKTALVTGAAQGIGKAIAARLAADGAT-VIVSDINAEGAKAAAASIG-KKARAIAAD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++   VKAL        G +DI+ +NA I         D+D   + ++  +N+ G    
Sbjct: 61  ISDPGSVKALFAEIQALTGGIDILVNNASI--VPFVAWDDVDLDHWRKIIDVNLTGTFIV 118

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            +     M   G  G ++  AS     G      Y  +K  VIG  R+ + +LG + I  
Sbjct: 119 TRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITA 178

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAG---HVADAVLFLACRDSE 248
           N V+P  + +         P +E     E    ++      G   H+AD V FLA  D+ 
Sbjct: 179 NAVTPGLIESDGV---KASPHNEAFGFVEMLQAMK----GKGQPEHIADVVSFLASDDAR 231

Query: 249 FVTGHDLVVDGG 260
           ++TG  L VD G
Sbjct: 232 WITGQTLNVDAG 243

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score =  183 bits (468), Expect = 1e-57
 Identities = 63/248 (25%), Positives = 109/248 (43%), Gaps = 18/248 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
           + L G+VA++TG + GIG   AR     GAR +V+     E  R V   I    G+    
Sbjct: 25  SSLSGQVAVVTGASRGIGAAIARKLGSLGAR-VVLTARDVEKLRAVEREIVAAGGEAESH 83

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
            CD+++   + A     +  +G+ D++ +NAG+       +  +  + +D L A+N++  
Sbjct: 84  ACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGV-GWFGGPLHTMKPAEWDALIAVNLKAP 142

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              ++  A  M+    RG I+  +S+AG         Y  SK  + GL+ SA+ +L  H 
Sbjct: 143 YLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQ 201

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           +RV+ V+P  + T                L   ++ L    +    +AD V  LA +  +
Sbjct: 202 VRVSLVAPGSVRTEFG-----------VGLSAKKSALGA--IEPDDIADVVALLATQADQ 248

Query: 249 FVTGHDLV 256
                 LV
Sbjct: 249 SFISEVLV 256

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score =  183 bits (468), Expect = 1e-57
 Identities = 79/285 (27%), Positives = 128/285 (44%), Gaps = 43/285 (15%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIV------------IADI 48
           + ++S      +L+GKVA++TG   GIG   A      GA+++V            +++I
Sbjct: 4   VENASETYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEI 63

Query: 49  QDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT 108
           +      +A          +  D+    ++  L D  V ++G LDI  SN+G++S     
Sbjct: 64  KALGSDAIA----------IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGH 111

Query: 109 VLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYH 167
           + D+    FDR+F++N RG     + A R + EGG    IV T+S  +      + + Y 
Sbjct: 112 LKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGG---RIVLTSSNTSKDFSVPKHSLYS 168

Query: 168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLT--------CHAYGMPADEVEKLF 219
            SK AV   VR  S   G   I VN V+P G  T +          +     A++ +++ 
Sbjct: 169 GSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMA 228

Query: 220 EPQTPLEGVVLRAGH---VADAVLFLACRDSEFVTGHDLVVDGGF 261
              +PL     R G    VA+ V FL  ++ E+V G  L +DGG 
Sbjct: 229 AHASPLH----RNGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score =  181 bits (462), Expect = 4e-57
 Identities = 43/250 (17%), Positives = 82/250 (32%), Gaps = 21/250 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           +     I+TG  SG+G        + G ++ ++      L +Q    +G      +  D+
Sbjct: 1   MSLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRL-QQQELLLG-NAVIGIVADL 58

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +   V     + V+  G  +++   AG        V         R+   N+       
Sbjct: 59  AHHEDVDVAFAAAVEWGGLPELVLHCAGT--GEFGPVGVYTAEQIRRVMESNLVSTILVA 116

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +   R++ E G  G +    S A   G    + Y  SK  + G + S   +L    +R+ 
Sbjct: 117 QQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLV 174

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF-LACRDSEFVT 251
            + P G+ +    +   +                   +     A  +L  L  R S  VT
Sbjct: 175 NLYPSGIRSEFWDNTDHVDPSG--------------FMTPEDAAAYMLDALEARSSCHVT 220

Query: 252 GHDLVVDGGF 261
              +  + G 
Sbjct: 221 DLFIGRNEGH 230

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score =  180 bits (460), Expect = 2e-56
 Identities = 75/267 (28%), Positives = 117/267 (43%), Gaps = 22/267 (8%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           +   SM         KVAI+TG + GIG   A   A  G  +++    +     +VA  I
Sbjct: 18  LYFQSM-----METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKI 72

Query: 61  GV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
               GK      DV++   V+ L  +  + +G +D++ +NAGI+     T+ +   + FD
Sbjct: 73  EAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP--LTTIAETGDAVFD 130

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           R+ A+N++G    ++ AA+ +  GG    I+  ++            Y  +K  V  +  
Sbjct: 131 RVIAVNLKGTFNTLREAAQRLRVGG---RIINMSTSQVGLLHPSYGIYAAAKAGVEAMTH 187

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---V 235
             S +L    I VN V+P   AT L        +DEV   F    PLE    R G    +
Sbjct: 188 VLSKELRGRDITVNAVAPGPTATDLF---LEGKSDEVRDRFAKLAPLE----RLGTPQDI 240

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFL 262
           A AV FLA  D  +V G  L  +GG +
Sbjct: 241 AGAVAFLAGPDGAWVNGQVLRANGGII 267

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score =  181 bits (461), Expect = 2e-56
 Identities = 64/272 (23%), Positives = 111/272 (40%), Gaps = 26/272 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
             E   A+ITGGA  IG + A      G R++V     +   +++   +     G     
Sbjct: 8   ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLC 67

Query: 69  HCDVTNECQV----KALVDSTVQNYGQLDIMFSNAGI---------LSSSDQTVLDLDFS 115
             D++    +    + ++D + + +G+ D++ +NA             ++         +
Sbjct: 68  KGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDA 127

Query: 116 AFDRLFAINVRGMAACVKHAARVMVEGGV----RGSIVCTASVAGSCGGKRRTDYHMSKH 171
               LF  N       ++  AR   EGG       S+V                Y M+KH
Sbjct: 128 QVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKH 187

Query: 172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR 231
           A+ GL R+A+++L    IRVN V+P     P           E ++ +  + PL      
Sbjct: 188 ALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA------MPQETQEEYRRKVPLGQSEAS 241

Query: 232 AGHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
           A  +ADA+ FL  +D+ ++TG  L VDGG ++
Sbjct: 242 AAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 273

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score =  180 bits (460), Expect = 3e-56
 Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 19/256 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHC 70
           L G+ A++TG  SGIG   A  +A  GA  ++     D +          G G    V  
Sbjct: 29  LAGRTAVVTGAGSGIGRAIAHGYARAGAH-VLAWGRTDGVKEVADEIADGG-GSAEAVVA 86

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+ +      + +  +    ++D++ +NAGI   +     ++    +  +  +N+     
Sbjct: 87  DLADLEGAANVAE-ELAATRRVDVLVNNAGI--IARAPAEEVSLGRWREVLTVNLDAAWV 143

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +     M+  G  G IV  AS+    GG+    Y  SKHAV+GL R+ + +    G+ 
Sbjct: 144 LSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVG 202

Query: 191 VNCVSPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGHVAD---AVLFLACRD 246
           VN ++P  + T  T     + AD E       + P      R     D     +FLA   
Sbjct: 203 VNALAPGYVVTANT---AALRADDERAAEITARIPAG----RWATPEDMVGPAVFLASDA 255

Query: 247 SEFVTGHDLVVDGGFL 262
           + +V G  L VDGG+L
Sbjct: 256 ASYVHGQVLAVDGGWL 271

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score =  180 bits (458), Expect = 7e-56
 Identities = 55/262 (20%), Positives = 96/262 (36%), Gaps = 30/262 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------G 63
            L GK   I+GG+ GIG   A+  A  GA + ++A   +   +   T            G
Sbjct: 6   SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG 65

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
           +   +  D+ +   V A V  TV+ +G +DI  +NA  ++    ++ ++    FD +  I
Sbjct: 66  QALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN--LGSIEEVPLKRFDLMNGI 123

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASV 182
            VRG  A  +     M        I+  +            T Y M+K+ +       + 
Sbjct: 124 QVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAE 182

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAV 239
           +L   GI  N + P                  V+ L      +     R+      ADA 
Sbjct: 183 ELRDAGIASNTLWPRTTVAT----------AAVQNLLGGDEAMA----RSRKPEVYADAA 228

Query: 240 LFLACRDSEFVTGHDLVVDGGF 261
             +  + S + TG+ L+ +   
Sbjct: 229 YVVLNKPSSY-TGNTLLCEDVL 249

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score =  178 bits (455), Expect = 8e-56
 Identities = 57/252 (22%), Positives = 82/252 (32%), Gaps = 11/252 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
            V  ITG ASGIG     L A  G   ++  D          ++ G G+   V   +   
Sbjct: 2   SVIAITGSASGIGAALKELLARAGHT-VIGIDRGQADIEADLSTPG-GRETAVAAVLDRC 59

Query: 76  CQ-----VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
                  V             L +  +  G+ +  D     L          +       
Sbjct: 60  GGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQ 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
                  ++      G       +A    G+    Y  SK+AV  L R   V     G+R
Sbjct: 120 PGAAELPMVEAML-AGDEARAIELAEQ-QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVR 177

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           +N V+P  + TPL   +   P    E       PL G       VA+A+ FL    + F+
Sbjct: 178 LNVVAPGAVETPLLQASKADP-RYGESTRRFVAPL-GRGSEPREVAEAIAFLLGPQASFI 235

Query: 251 TGHDLVVDGGFL 262
            G  L VDGG  
Sbjct: 236 HGSVLFVDGGMD 247

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score =  178 bits (455), Expect = 1e-55
 Identities = 73/274 (26%), Positives = 113/274 (41%), Gaps = 24/274 (8%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV- 62
             +      LEGKVA++TG   GIG   A      G ++IV      E   +V  +I   
Sbjct: 18  GPLGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN 77

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
                 V  +V     +  + +  V+ +G+LDI+ SN+G++S     V D+    FDR+F
Sbjct: 78  GSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVS--FGHVKDVTPEEFDRVF 135

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSA 180
            IN RG     + A + +  GG    ++   S+ G      +   Y  SK A+    R  
Sbjct: 136 TINTRGQFFVAREAYKHLEIGG---RLILMGSITGQAKAVPKHAVYSGSKGAIETFARCM 192

Query: 181 SVQLGVHGIRVNCVSPHGLATPLT---------CHAYGMPADEVEKLFEPQTPLEGVVLR 231
           ++ +    I VN V+P G+ T +                  +  E      +PL     R
Sbjct: 193 AIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR----R 248

Query: 232 AGH---VADAVLFLACRDSEFVTGHDLVVDGGFL 262
            G    +A  V FLA  D  +VTG  + +DGG  
Sbjct: 249 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGAC 282

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score =  178 bits (454), Expect = 3e-55
 Identities = 64/280 (22%), Positives = 110/280 (39%), Gaps = 26/280 (9%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV- 62
           S +    + +E   A++TG A  IG   A      G R+++      E    +A  +   
Sbjct: 12  SGLVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE 71

Query: 63  --GKCHYVHCDVTNEC----QVKALVDSTVQNYGQLDIMFSNAGI--------LSSSDQT 108
                     D+TN        + +++S  + +G+ D++ +NA              D +
Sbjct: 72  RSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNS 131

Query: 109 VLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-----RGSIVCTASVAGSCGGKRR 163
                 +    L   N           A+              SIV              
Sbjct: 132 NGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAF 191

Query: 164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT 223
           + Y+M KHA++GL +SA+++L  +GIRVN V+P     P+      M  +E +K    + 
Sbjct: 192 SLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPVA-----MGEEEKDKWRR-KV 245

Query: 224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI 263
           PL      A  +ADAV+FL    ++++TG  + VDGG  +
Sbjct: 246 PLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL 285

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score =  176 bits (450), Expect = 4e-55
 Identities = 47/256 (18%), Positives = 88/256 (34%), Gaps = 20/256 (7%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
             AI+T      G  +A   ++ G   +   D   +   ++          Y      +E
Sbjct: 2   STAIVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQKDELEAFAE----TYPQLKPMSE 56

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQT-VLDLDFSAFDRLFAINVRGMAACVKH 134
            +   L+++    YGQ+D++ SN     + +   +       +            A V  
Sbjct: 57  QEPAELIEAVTSAYGQVDVLVSNDIF--APEFQPIDKYAVEDYRGAVEALQIRPFALVNA 114

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
            A  M +    G I+   S       K  + Y  ++     L  + S +LG + I V  +
Sbjct: 115 VASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI 173

Query: 195 SPHGLATPLT----CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
            P+ L +  +             E     +  T L+    R G    + + V FLA    
Sbjct: 174 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ----RLGTQKELGELVAFLASGSC 229

Query: 248 EFVTGHDLVVDGGFLI 263
           +++TG    + GGF +
Sbjct: 230 DYLTGQVFWLAGGFPM 245

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score =  176 bits (449), Expect = 4e-55
 Identities = 35/251 (13%), Positives = 73/251 (29%), Gaps = 26/251 (10%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
             E +  ++ GG   +G    + F       +   D+ +      +  + +         
Sbjct: 4   SGEARRVLVYGGRGALGSRCVQAFRARNWW-VASIDVVENEEASASVIVKMT------DS 56

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
            T +          +    ++D +   AG  +  +       F   D ++  ++      
Sbjct: 57  FTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGGN-AKSKSLFKNCDLMWKQSIWTSTIS 115

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--HGI 189
              A + + EG   G +    + A   G      Y M+K AV  L +S + +      G 
Sbjct: 116 SHLATKHLKEG---GLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGA 172

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
               V P  L TP+      MP  +       +            + +        +   
Sbjct: 173 AAIAVLPVTLDTPMN--RKSMPEADFSSWTPLE-----------FLVETFHDWITGNKRP 219

Query: 250 VTGHDLVVDGG 260
            +G  + V   
Sbjct: 220 NSGSLIQVVTT 230

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score =  176 bits (450), Expect = 5e-55
 Identities = 44/252 (17%), Positives = 85/252 (33%), Gaps = 24/252 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L     +ITG +  +G   A    +HG R ++I+   +       T +       ++ D
Sbjct: 24  TLSSAPILITGASQRVGLHCALRLLEHGHR-VIISYRTEH---ASVTELRQAGAVALYGD 79

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
            + E  + A +D        L  +  NA             +   F R+F++++      
Sbjct: 80  FSCETGIMAFIDLLKTQTSSLRAVVHNASE---WLAETPGEEADNFTRMFSVHMLAPYLI 136

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
             H   ++        IV  +      G  +   Y  +K  +  L  S + +     ++V
Sbjct: 137 NLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFA-PLVKV 194

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSE 248
           N ++P  L                      ++ L            +  ++ +L   DS 
Sbjct: 195 NGIAPALLMFQPK------DDAAYRANALAKSALG----IEPGAEVIYQSLRYLL--DST 242

Query: 249 FVTGHDLVVDGG 260
           +VTG  L V+GG
Sbjct: 243 YVTGTTLTVNGG 254

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score =  176 bits (449), Expect = 7e-55
 Identities = 67/256 (26%), Positives = 115/256 (44%), Gaps = 19/256 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
            L+G+  ++TGG  GIG   A +FA  GA  + +A             +   G GK   V
Sbjct: 7   DLQGRSVVVTGGTKGIGRGIATVFARAGAN-VAVAGRSTADIDACVADLDQLGSGKVIGV 65

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV++  Q  AL    V+ +G +D++ +NAG+    D  +  +     + +FA+NV G 
Sbjct: 66  QTDVSDRAQCDALAGRAVEEFGGIDVVCANAGV--FPDAPLATMTPEQLNGIFAVNVNGT 123

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGVH 187
              V+     ++  G  G +V T+S+ G   G    + Y  +K A +G +R+A+++L  H
Sbjct: 124 FYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPH 182

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
            I VN + P  + T           + +  +     P        G    +     FLA 
Sbjct: 183 KITVNAIMPGNIMTEGL---LENGEEYIASMAR-SIPAG----ALGTPEDIGHLAAFLAT 234

Query: 245 RDSEFVTGHDLVVDGG 260
           +++ ++TG  + VDGG
Sbjct: 235 KEAGYITGQAIAVDGG 250

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score =  176 bits (448), Expect = 1e-54
 Identities = 73/268 (27%), Positives = 116/268 (43%), Gaps = 23/268 (8%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           +   SM  +   L GK A +TGG+ GIG   A+  A  GA + +      E  + V + I
Sbjct: 18  LYFQSMMTSI-SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEI 76

Query: 61  GV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
               G+   +  D  +   ++  +  TV+  G LDI+ ++AGI       + +   + FD
Sbjct: 77  EQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH--SAPLEETTVADFD 134

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS-VAGSCGGKRRTDYHMSKHAVIGLV 177
            + A+N R     ++ A+R + +GG    I+   S +A        + Y  SK A+ GL 
Sbjct: 135 EVMAVNFRAPFVAIRSASRHLGDGG---RIITIGSNLAELVPWPGISLYSASKAALAGLT 191

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGH-- 234
           +  +  LG  GI VN V P    T +       PAD +  +    +          G   
Sbjct: 192 KGLARDLGPRGITVNIVHPGSTDTDMN------PADGDHAEAQRERIATG----SYGEPQ 241

Query: 235 -VADAVLFLACRDSEFVTGHDLVVDGGF 261
            +A  V +LA    +FVTG  L +DGG 
Sbjct: 242 DIAGLVAWLAGPQGKFVTGASLTIDGGA 269

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score =  174 bits (442), Expect = 6e-54
 Identities = 53/275 (19%), Positives = 97/275 (35%), Gaps = 57/275 (20%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
            + +I+G A+GIG  T ++    G + IV  DI+D                 V  D++  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDA---------------EVIADLSTA 45

Query: 76  CQVKALVDSTV-QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
              K  +   + +    +D +   AG+   +              + ++N  G    +  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK---------VLGNVVSVNYFGATELMDA 96

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTD----------------------------Y 166
               + +G  + + V  +SVA +     +                              Y
Sbjct: 97  FLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAY 155

Query: 167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE 226
             SK+A+   VR  +   G  G+R+N ++P    TPL       P    E + +   P+ 
Sbjct: 156 AGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPR-YGESIAKFVPPM- 213

Query: 227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           G       +A  + FL    + +V G  +V+DGG 
Sbjct: 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score =  174 bits (443), Expect = 9e-54
 Identities = 63/259 (24%), Positives = 116/259 (44%), Gaps = 17/259 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCD 71
           L G++A++TGG+ GIG+  A+   + GAR + I     E     AT +   G C  +  D
Sbjct: 27  LAGRIALVTGGSRGIGQMIAQGLLEAGAR-VFICARDAEACADTATRLSAYGDCQAIPAD 85

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           +++E   + L  +  +   +LDI+ +NAG   S    +     S ++++  +NV  + +C
Sbjct: 86  LSSEAGARRLAQALGELSARLDILVNNAGT--SWGAALESYPVSGWEKVMQLNVTSVFSC 143

Query: 132 VKHAARVMVEGGV---RGSIVCTASVAGSCGGKRRT-DYHMSKHAVIGLVRSASVQLGVH 187
           ++    ++           ++   SVAG      +   Y  SK A+  L R  + +L   
Sbjct: 144 IQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGE 203

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
            I VN ++P    + +T H    P  +  +      P+     R G    +A   + LA 
Sbjct: 204 HINVNVIAPGRFPSRMTRHIANDP--QALEADSASIPMG----RWGRPEEMAALAISLAG 257

Query: 245 RDSEFVTGHDLVVDGGFLI 263
               ++TG+ + +DGGF +
Sbjct: 258 TAGAYMTGNVIPIDGGFHL 276

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score =  172 bits (439), Expect = 1e-53
 Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 24/253 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           + A++TGG+ GIG   A      G R + IA    E   Q   ++ +        D+  +
Sbjct: 3   RKALVTGGSRGIGRAIAEALVARGYR-VAIASRNPEEAAQSLGAVPL------PTDLEKD 55

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
              K LV   ++  G L ++   A +  +  +  L+L +  + R+  +++       + A
Sbjct: 56  -DPKGLVKRALEALGGLHVLVHAAAV--NVRKPALELSYEEWRRVLYLHLDVAFLLAQAA 112

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGK--RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
           A  M E G  G ++   SV     G       Y  +K A++GL R+ + +    GIRVN 
Sbjct: 113 APHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVNL 171

Query: 194 VSPHGLATPLTCHAYGMPADE-VEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSEF 249
           + P  + T  T     +  +  + +    + P+     R      +A     L   ++E+
Sbjct: 172 LCPGYVETEFT---LPLRQNPELYEPITARIPMG----RWARPEEIARVAAVLCGDEAEY 224

Query: 250 VTGHDLVVDGGFL 262
           +TG  + VDGGFL
Sbjct: 225 LTGQAVAVDGGFL 237

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score =  171 bits (436), Expect = 3e-53
 Identities = 41/251 (16%), Positives = 74/251 (29%), Gaps = 27/251 (10%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           +     I+ GG   +G      F  +G   ++  D+           +        + + 
Sbjct: 1   MSSGKVIVYGGKGALGSAILEFFKKNGYT-VLNIDLSANDQADSNILVD------GNKNW 53

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T + Q      ++     Q+D +F  AG  +              D +   +V   A   
Sbjct: 54  TEQEQSILEQTASSLQGSQVDGVFCVAGGWAGGS-ASSKDFVKNADLMIKQSVWSSAIAA 112

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--HGIR 190
           K A   +  G   G +  T + A          Y M+K AV  L  S + +         
Sbjct: 113 KLATTHLKPG---GLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSA 169

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD-SEF 249
           V  + P  L TP+      MP  +                    +++ +L       S  
Sbjct: 170 VLTIMPVTLDTPMN--RKWMPNADHSSWTPLS-----------FISEHLLKWTTETSSRP 216

Query: 250 VTGHDLVVDGG 260
            +G  L +   
Sbjct: 217 SSGALLKITTE 227

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score =  172 bits (438), Expect = 1e-52
 Identities = 52/246 (21%), Positives = 93/246 (37%), Gaps = 19/246 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCH 66
               G+ A +TGGA+G+G    R   + G + + IADI+ +   +   ++       +  
Sbjct: 4   KDFAGRTAFVTGGANGVGIGLVRQLLNQGCK-VAIADIRQDSIDKALATLEAEGSGPEVM 62

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            V  DV +    K   D     +G + I+ +NAG+       + +  +  +D L  +N+ 
Sbjct: 63  GVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLFQ--PIEESSYDDWDWLLGVNLH 120

Query: 127 GMAACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
           G+   V      MVE         G +V TAS+A          Y+ +K AV GL  S  
Sbjct: 121 GVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLH 180

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD-------EVEKLFEPQTPLEGVVLRAGH 234
             L  + I V+ + P  + + +       P           +   E    +    +    
Sbjct: 181 YSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGMEPDV 240

Query: 235 VADAVL 240
           +   V+
Sbjct: 241 IGARVI 246

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score =  170 bits (432), Expect = 2e-52
 Identities = 50/249 (20%), Positives = 92/249 (36%), Gaps = 25/249 (10%)

Query: 16  KVAIITGGASGIGETTARLFADHGARM------IVIADIQDELGRQVATSIGV--GKCHY 67
            + +ITG   GIG   A  FA            +V++        +++            
Sbjct: 3   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 62

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  D+++   V+ L    V+ YG +D + +NAG+       + DL    FD     N++G
Sbjct: 63  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNLKG 120

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                +    +M      G I    SVA +   +  + Y MSK    GLV +  +     
Sbjct: 121 TFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC 179

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            +R+  V P  + TP+         DE++           +++    +A  V+    + S
Sbjct: 180 NVRITDVQPGAVYTPMWGKV----DDEMQA----------LMMMPEDIAAPVVQAYLQPS 225

Query: 248 EFVTGHDLV 256
             V    ++
Sbjct: 226 RTVVEEIIL 234

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score =  170 bits (432), Expect = 2e-52
 Identities = 43/248 (17%), Positives = 86/248 (34%), Gaps = 15/248 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
                   + G    IG   A+ FA  G   +       E    +   I    G+     
Sbjct: 4   TPRNATVAVIGAGDYIGAEIAKKFAAEGFT-VFAGRRNGEKLAPLVAEIEAAGGRIVARS 62

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D  NE +V A ++     +  L++   N G   + +  +L+     F +++ +      
Sbjct: 63  LDARNEDEVTAFLN-AADAHAPLEVTIFNVGA--NVNFPILETTDRVFRKVWEMACWAGF 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + +AR+M+  G +G I  T + A   GG     +  +K  +  + +S + +L    I
Sbjct: 120 VSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNI 178

Query: 190 RV-NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD-S 247
            V + +   G+ T               K  +     +  ++    VA A   L  +  S
Sbjct: 179 HVAHLIIDSGVDTAWV---RERREQMFGK--DALANPDL-LMPPAAVAGAYWQLYQQPKS 232

Query: 248 EFVTGHDL 255
            +    ++
Sbjct: 233 AWTFEMEI 240

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score =  170 bits (434), Expect = 3e-52
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 19/256 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV 68
            L  +  ++TGG  GIG   A +FA  GA  + +A         V   +   G G    V
Sbjct: 38  DLSARSVLVTGGTKGIGRGIATVFARAGAN-VAVAARSPRELSSVTAELGELGAGNVIGV 96

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV++         + V  +G LD++ +NAGI    +  +  +       +  +NV+G 
Sbjct: 97  RLDVSDPGSCADAARTVVDAFGALDVVCANAGI--FPEARLDTMTPEQLSEVLDVNVKGT 154

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGVH 187
              V+     +   G RG ++ T+S+ G   G    + Y  SK A +G +R+A+++L   
Sbjct: 155 VYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPR 213

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
           G+ VN + P  + T        M  +E         P+       G    +     FLA 
Sbjct: 214 GVTVNAILPGNILTEGL---VDMG-EEYISGMARSIPMG----MLGSPVDIGHLAAFLAT 265

Query: 245 RDSEFVTGHDLVVDGG 260
            ++ ++TG  +VVDGG
Sbjct: 266 DEAGYITGQAIVVDGG 281

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score =  167 bits (426), Expect = 2e-51
 Identities = 71/263 (26%), Positives = 115/263 (43%), Gaps = 31/263 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           ++   VA++TGGASG+G  T +   D GA+ +V+ DI+   G  V   +G  +  +   D
Sbjct: 6   EIRDAVAVVTGGASGLGLATTKRLLDAGAQ-VVVLDIR---GEDVVADLG-DRARFAAAD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD----LDFSAFDRLFAINVRG 127
           VT+E  V + +D   +  G L I+ + AG    +   VL        +AF ++  IN+ G
Sbjct: 61  VTDEAAVASALD-LAETMGTLRIVVNCAGT--GNAIRVLSRDGVFSLAAFRKIVDINLVG 117

Query: 128 MAACVKHAARVMV-------EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
               ++ AA  +            RG I+ TASVA   G   +  Y  SK  V+G+    
Sbjct: 118 SFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPI 177

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VAD 237
           +  L  H IRV  ++P    TPL      +P +E       Q P      R G+      
Sbjct: 178 ARDLASHRIRVMTIAPGLFDTPLLA---SLP-EEARASLGKQVPHPS---RLGNPDEYGA 230

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
             + +   ++  + G  + +DG 
Sbjct: 231 LAVHII--ENPMLNGEVIRLDGA 251

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score =  167 bits (424), Expect = 8e-51
 Identities = 47/218 (21%), Positives = 79/218 (36%), Gaps = 17/218 (7%)

Query: 10  KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCH 66
              L+GK  I+TG + GIG   A   A  GA ++V A  ++ L ++V +     G    H
Sbjct: 23  PEMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETL-QKVVSHCLELGAASAH 81

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
           Y+   + +    +  V    +  G LD++  N    +S    +   D     +   +N  
Sbjct: 82  YIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFL 139

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
                   A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V
Sbjct: 140 SYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSV 197

Query: 187 --HGIRVNCVSPHGLATPLTCHA-------YGMPADEV 215
               + +       + T     A          P +E 
Sbjct: 198 SRVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEEC 235

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score =  165 bits (419), Expect = 3e-50
 Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 24/263 (9%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--------- 61
           N+L   +A++TG  SGIG   +   A  GA  +   D+     ++    +G         
Sbjct: 3   NRLRSALALVTGAGSGIGRAVSVRLAGEGAT-VAACDLDRAAAQETVRLLGGPGSKEGPP 61

Query: 62  VGKCHYVHCDVTNECQVKALVDSTVQNYGQ-LDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
            G       DV+     + L++     + +   ++ S AGI  + D+ +L +    +D++
Sbjct: 62  RGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGI--TQDEFLLHMSEDDWDKV 119

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
            A+N++G     + AA+ +V  G RGSI+  +S+ G  G   +T+Y  SK  VIGL ++A
Sbjct: 120 IAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTA 179

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VAD 237
           + +LG HGIR N V P  +ATP+T     +P  +V        P+       G    VAD
Sbjct: 180 ARELGRHGIRCNSVLPGFIATPMT---QKVP-QKVVDKITEMIPMG----HLGDPEDVAD 231

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
            V FLA  DS ++TG  + V GG
Sbjct: 232 VVAFLASEDSGYITGTSVEVTGG 254

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score =  166 bits (423), Expect = 4e-50
 Identities = 56/269 (20%), Positives = 99/269 (36%), Gaps = 31/269 (11%)

Query: 3   DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV 62
            S+M     +L G    ITG + GIG+  A   A  GA  IVIA    +   ++  +I  
Sbjct: 33  GSAMLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGAN-IVIAAKTAQPHPKLLGTIYT 91

Query: 63  ---------GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLD 113
                    GK      DV +E Q+ A V+  ++ +G +DI+ +NA  +  S    LD  
Sbjct: 92  AAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAI--SLTNTLDTP 149

Query: 114 FSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTDYHMSKH 171
               D +  +N RG     K     + +      I+  +          K+   Y ++K+
Sbjct: 150 TKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNLNPVWFKQHCAYTIAKY 208

Query: 172 AVIGLVRSASVQLGVHGIRVNCVSP-HGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL 230
            +   V   + +     I VN + P   + T        +    +E              
Sbjct: 209 GMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDM---LGGPGIESQCRKVD------- 257

Query: 231 RAGHVADAVLFLACRDSEFVTGHDLVVDG 259
               +ADA   +  +  +  TG+ ++ + 
Sbjct: 258 ---IIADAAYSI-FQKPKSFTGNFVIDEN 282

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score =  164 bits (418), Expect = 4e-50
 Identities = 50/212 (23%), Positives = 85/212 (40%), Gaps = 11/212 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           + G++ +ITG   GIG  TA  FA   ++ +V+ DI      + A        K H    
Sbjct: 29  VTGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTFVV 87

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D +N   + +         G + I+ +NAG++ +S   +        ++ F +NV     
Sbjct: 88  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNVLAHFW 145

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL---GVH 187
             K     M +    G IV  AS AG         Y  SK A +G  ++ + +L    + 
Sbjct: 146 TTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 204

Query: 188 GIRVNCVSPHGLATPLT--CHAYGMPADEVEK 217
           G++  C+ P+ + T           P  E E+
Sbjct: 205 GVKTTCLCPNFVNTGFIKNPSTSLGPTLEPEE 236

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score =  164 bits (417), Expect = 4e-50
 Identities = 65/263 (24%), Positives = 112/263 (42%), Gaps = 22/263 (8%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCH 66
           A + L+GKVA++TG + GIG   A+  A+ GA + +    + E   +    I    G   
Sbjct: 1   ANSMLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAF 60

Query: 67  YVHCDVTNECQVKALVDSTVQ------NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
            +  ++ +   V+AL  S            + DI+ +NAGI       + +     FDR+
Sbjct: 61  SIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGI--GPGAFIEETTEQFFDRM 118

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
            ++N +     ++ A   + +      I+  +S A          Y M+K A+  +  + 
Sbjct: 119 VSVNAKAPFFIIQQALSRLRDNS---RIINISSAATRISLPDFIAYSMTKGAINTMTFTL 175

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VAD 237
           + QLG  GI VN + P  + T +   A  +    +++     +       R G    +AD
Sbjct: 176 AKQLGARGITVNAILPGFVKTDMN--AELLSDPMMKQYATTISAFN----RLGEVEDIAD 229

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
              FLA  DS +VTG  + V GG
Sbjct: 230 TAAFLASPDSRWVTGQLIDVSGG 252

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score =  164 bits (417), Expect = 4e-50
 Identities = 56/254 (22%), Positives = 99/254 (38%), Gaps = 12/254 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           + G+V ++TG + GIG   A      GA  + I     +  R VA       G+C  V C
Sbjct: 3   MNGQVCVVTGASRGIGRGIALQLCKAGAT-VYITGRHLDTLRVVAQEAQSLGGQCVPVVC 61

Query: 71  DVTNECQVKALVDSTVQ-NYGQLDIMFSNAGILSSS-----DQTVLDLDFSAFDRLFAIN 124
           D + E +V++L +   +   G+LD++ +NA     +     ++   +   S +D +  + 
Sbjct: 62  DSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVG 121

Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           +RG   C  + AR+MV  G +G IV  +S            Y + K A   L    + +L
Sbjct: 122 LRGHYFCSVYGARLMVPAG-QGLIVVISSPGSL-QYMFNVPYGVGKAACDKLAADCAHEL 179

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
             HG+    + P  + T L            + + +                  V+ LA 
Sbjct: 180 RRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFSSAETTELSGKCVVALAT 239

Query: 245 -RDSEFVTGHDLVV 257
             +   ++G  L  
Sbjct: 240 DPNILSLSGKVLPS 253

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score =  162 bits (413), Expect = 2e-49
 Identities = 59/269 (21%), Positives = 105/269 (39%), Gaps = 30/269 (11%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHY 67
           +L+GK A++TG  +GIG+  A      GA  ++I   ++E   +    I           
Sbjct: 7   QLKGKTALVTGSTAGIGKAIATSLVAEGAN-VLINGRREENVNETIKEIRAQYPDAILQP 65

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           V  D+  E   + +++     Y ++DI+ +N GI         D+    + +LF +N+  
Sbjct: 66  VVADLGTEQGCQDVIEK----YPKVDILINNLGI--FEPVEYFDIPDEDWFKLFEVNIMS 119

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                +   + M+E    G ++  AS A     +    Y  +K   + L RS +      
Sbjct: 120 GVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGT 178

Query: 188 GIRVNCVSPHGLATPLT-------CHAYGMPADEVEKLF----EPQTPLEGVVLRAGH-- 234
            + VN + P    T               +  +E EK F     P + ++    R     
Sbjct: 179 NVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQ----RLIRPE 234

Query: 235 -VADAVLFLACRDSEFVTGHDLVVDGGFL 262
            +A  V FL+   S  + G  L +DGG +
Sbjct: 235 EIAHLVTFLSSPLSSAINGSALRIDGGLV 263

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score =  161 bits (411), Expect = 3e-49
 Identities = 56/240 (23%), Positives = 91/240 (37%), Gaps = 23/240 (9%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-----GVGKC 65
            + +  +AIITG + GIG   A   A  G R+++IA  +  L  +V   I      V + 
Sbjct: 3   LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNL-EKVHDEIMRSNKHVQEP 61

Query: 66  HYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINV 125
             +  D+T+  +    +    Q YG +DI+ + A +        L      F ++  INV
Sbjct: 62  IVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMDG---SLSEPVDNFRKIMEINV 118

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
                 +K    +M      G I   AS A   G      Y  +K A++GL  S   +L 
Sbjct: 119 IAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELA 177

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             GIRV  + P  + T +        A    K  E         ++   + + +  L   
Sbjct: 178 PLGIRVTTLCPGWVNTDMAKK-----AGTPFKDEEM--------IQPDDLLNTIRCLLNL 224

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score =  163 bits (414), Expect = 3e-49
 Identities = 62/289 (21%), Positives = 102/289 (35%), Gaps = 47/289 (16%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHY 67
                 VA++TG A  +G + A      G  + +           ++ ++          
Sbjct: 5   TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 64

Query: 68  VHCDVTNEC-----------------QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL 110
           V  D++N                   +   LV +   ++G+ D++ +NA         +L
Sbjct: 65  VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY--PTPLL 122

Query: 111 DLDFSAFD--------------RLFAINVRGMAACVKHAARVMVEGGV-----RGSIVCT 151
             D    +               LF  N       +K  A  +            SI+  
Sbjct: 123 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 182

Query: 152 ASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP 211
                +      T Y M+K A+ GL RSA+++L    IRVN V P G  + L      MP
Sbjct: 183 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVLV---DDMP 237

Query: 212 ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
               E     + PL      A  V+D V+FL    ++++TG  + VDGG
Sbjct: 238 PAVWEGHRS-KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 285

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score =  161 bits (409), Expect = 5e-49
 Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 19/252 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ K  +ITG A GIG  T  LFA  GAR +V  DI++   R+ A ++G    H V  D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEGPLREAAEAVGA---HPVVMD 57

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +   V+      + + G+LD +   AGI  + D     +    ++ +  +N+ G    
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI--TRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K A+  M E    GSIV TAS     G   + +Y  S   V+GL R+ +++LG  GIRV
Sbjct: 116 AKAASEAMREKN-PGSIVLTASRVYL-GNLGQANYAASMAGVVGLTRTLALELGRWGIRV 173

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSE 248
           N ++P  + T +T     +P    EK     TPL     RAG    VA A LFL   +S 
Sbjct: 174 NTLAPGFIETRMT---AKVPEKVREKAIA-ATPLG----RAGKPLEVAYAALFLLSDESS 225

Query: 249 FVTGHDLVVDGG 260
           F+TG  L VDGG
Sbjct: 226 FITGQVLFVDGG 237

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score =  161 bits (409), Expect = 9e-49
 Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 22/263 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
             + +VA++TG  SGIG   AR     G R + +    +E  R     +     +     
Sbjct: 19  TQDSEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEEGLRTTLKELREAGVEADGRT 77

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV +  +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+ 
Sbjct: 78  CDVRSVPEIEALVAAVVERYGPVDVLVNNAGR--PGGGATAELADELWLDVVETNLTGVF 135

Query: 130 ACVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
              K   +   M+E G  G IV  AS  G  G      Y  SKH V+G  ++  ++L   
Sbjct: 136 RVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELART 194

Query: 188 GIRVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VAD 237
           GI VN V P  + TP+           + +  +E       + P+     R      VA+
Sbjct: 195 GITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG----RYVQPSEVAE 250

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
            V +L    +  VT   L V GG
Sbjct: 251 MVAYLIGPGAAAVTAQALNVCGG 273

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score =  161 bits (409), Expect = 1e-48
 Identities = 71/259 (27%), Positives = 105/259 (40%), Gaps = 16/259 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
              + A +TG +SGIG   AR  A  G   +       +        +           C
Sbjct: 22  SRPQTAFVTGVSSGIGLAVARTLAARGIA-VYGCARDAKNVSAAVDGLRAAGHDVDGSSC 80

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+  +V A V + V+ +G + I+ ++AG   +      DLD + +  +   N+ G+  
Sbjct: 81  DVTSTDEVHAAVAAAVERFGPIGILVNSAGR--NGGGETADLDDALWADVLDTNLTGVFR 138

Query: 131 CVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
             +   R   M E G  G IV  AS  G  G      Y  SKH V+G  +S   +L   G
Sbjct: 139 VTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTG 197

Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           I VN V P  + TP+           +G+   EV + F  + PL G       VA  V +
Sbjct: 198 ITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPEEVAGLVGY 256

Query: 242 LACRDSEFVTGHDLVVDGG 260
           L    +  +T   L V GG
Sbjct: 257 LVTDAAASITAQALNVCGG 275

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score =  162 bits (412), Expect = 1e-48
 Identities = 62/289 (21%), Positives = 103/289 (35%), Gaps = 47/289 (16%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHY 67
                 VA++TG A  +G + A      G  + +           ++ ++          
Sbjct: 42  TAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAIT 101

Query: 68  VHCDVTNE-----------------CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVL 110
           V  D++N                   +   LV +   ++G+ D++ +NA         +L
Sbjct: 102 VQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFY--PTPLL 159

Query: 111 DLDFSAFD--------------RLFAINVRGMAACVKHAARVMVEGGVR-----GSIVCT 151
             D    +               LF  N       +K  A  +     +      SI+  
Sbjct: 160 RNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINM 219

Query: 152 ASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP 211
                +      T Y M+K A+ GL RSA+++L    IRVN V P G  + L      MP
Sbjct: 220 VDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGP-G-LSVLV---DDMP 274

Query: 212 ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG 260
               E     + PL      A  V+D V+FL    ++++TG  + VDGG
Sbjct: 275 PAVWEGHRS-KVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGG 322

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score =  159 bits (404), Expect = 3e-48
 Identities = 73/257 (28%), Positives = 108/257 (42%), Gaps = 35/257 (13%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           + A++TGGASG+G   A      G R +V+ D++ E               YV  DVT E
Sbjct: 3   RSALVTGGASGLGRAAALALKARGYR-VVVLDLRREGED----------LIYVEGDVTRE 51

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLD----LDFSAFDRLFAINVRGMAAC 131
             V+  V    +    L  + S AG+     + +L         +F R+  +N+ G    
Sbjct: 52  EDVRRAVARAQE-EAPLFAVVSAAGV--GLAEKILGKEGPHGLESFRRVLEVNLLGTFNV 108

Query: 132 VKHAARVMV-----EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
           ++ AA  M        G RG IV TASVA   G   +  Y  SK  V+ L   A+ +L  
Sbjct: 109 LRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAG 168

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLA 243
            GIRV  V+P    TPL     G+P ++ +     Q P      R G     A  VL + 
Sbjct: 169 WGIRVVTVAPGLFDTPLLQ---GLP-EKAKASLAAQVPFPP---RLGRPEEYAALVLHIL 221

Query: 244 CRDSEFVTGHDLVVDGG 260
             ++  + G  + +DG 
Sbjct: 222 --ENPMLNGEVVRLDGA 236

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score =  158 bits (403), Expect = 6e-48
 Identities = 67/262 (25%), Positives = 114/262 (43%), Gaps = 23/262 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKCHYV 68
           ++GK+A++T G+SG+G  +A   A +GAR +++     E     A+ I       +   V
Sbjct: 5   IQGKLAVVTAGSSGLGFASALELARNGAR-LLLFSRNREKLEAAASRIASLVSGAQVDIV 63

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             D+     +  L +   ++ G  DI+  + G         ++L    +D  + +  R  
Sbjct: 64  AGDIREPGDIDRLFE-KARDLGGADILVYSTGG--PRPGRFMELGVEDWDESYRLLARSA 120

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               + AA  MVE G  G +V   SV      +     ++ +  VIG+VR+ +++L  HG
Sbjct: 121 VWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHG 179

Query: 189 IRVNCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADA 238
           + VN V P  + T              G+  +E  K    + P+     R G    +A  
Sbjct: 180 VTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMG----RVGKPEELASV 235

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           V FLA   + F+TG  + VDGG
Sbjct: 236 VAFLASEKASFITGAVIPVDGG 257

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score =  157 bits (400), Expect = 2e-47
 Identities = 47/256 (18%), Positives = 101/256 (39%), Gaps = 16/256 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
               + A+IT G  G+G+         G  + V           +  +      +  +V 
Sbjct: 4   GRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQ 63

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DVT +  +  +V+  + ++G++D + +NAG      + ++D +   ++ +   N+  + 
Sbjct: 64  ADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVF 123

Query: 130 ACVKHAARVMVEGGVRGSIV--CTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
             +K    VM +    G I+         + G   R+ +  +K  ++ L ++ + +   +
Sbjct: 124 HLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEY 182

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLAC 244
           GI  N V P  +   +         +  +      TP+     R+G    +A  + FL  
Sbjct: 183 GITANMVCPGDIIGEMK---EATIQEARQLKEH-NTPIG----RSGTGEDIARTISFLCE 234

Query: 245 RDSEFVTGHDLVVDGG 260
            DS+ +TG  + V G 
Sbjct: 235 DDSDMITGTIIEVTGA 250

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score =  156 bits (397), Expect = 4e-47
 Identities = 50/258 (19%), Positives = 95/258 (36%), Gaps = 17/258 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFA---DHGARMIVIA---DIQDELGRQVATSIGVGK 64
           + L   V ++TG + G G   A   A     G+ M+V A    +  +L  ++       K
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLK 61

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYG----QLDIMFSNAGILS-SSDQTVLDLDFSAFDR 119
                 D+  E  V+ L+ +  +       Q  ++ +NA  L   S   +   D +  + 
Sbjct: 62  VVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNN 121

Query: 120 LFAINVRGMAACVKHAARVMVE-GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
            +A+N+  M            +  G+  ++V  +S+      K    Y   K A   L +
Sbjct: 122 YWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQ 181

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGHVAD 237
             + +     +RV   +P  L   +   A     D E+    +      G ++  G  A 
Sbjct: 182 VLAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSAQ 238

Query: 238 AVLFLACRDSEFVTGHDL 255
            +L L  +D+ F +G  +
Sbjct: 239 KLLGLLQKDT-FQSGAHV 255

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score =  154 bits (391), Expect = 2e-46
 Identities = 58/234 (24%), Positives = 95/234 (40%), Gaps = 22/234 (9%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +      +ITG + GIGE TARL    G R+ ++A  +  L + +A  +       +  D
Sbjct: 2   EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL-QALAAELE--GALPLPGD 58

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V  E      V +  + +G+L  + +NAG+       V +L    +  +   N+ G    
Sbjct: 59  VREEGDWARAVAAMEEAFGELSALVNNAGVGVMK--PVHELTLEEWRLVLDTNLTGAFLG 116

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++HA   ++  G  G+IV   S+AG    K    Y+ SK  ++GL  +A + L    +RV
Sbjct: 117 IRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRV 175

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             V P  + T    +                  L+        VA AVLF    
Sbjct: 176 VNVLPGSVDTGFAGNTP-----------GQAWKLK-----PEDVAQAVLFALEM 213

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} Length = 247

 Score =  153 bits (389), Expect = 5e-46
 Identities = 70/254 (27%), Positives = 119/254 (46%), Gaps = 16/254 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           +L+GK AI+TG + G+G+  A    + GA +++            A              
Sbjct: 2   QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAK 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV N   V+ +V + +  +G++DI+ +NAGI  + D  +L +    +D +   N++   
Sbjct: 62  GDVKNPEDVENMVKTAMDAFGRIDILVNNAGI--TRDTLMLKMSEKDWDDVLNTNLKSAY 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            C K  +++M++    G I+   S+AG  G   + +Y  SK  +IG  +S + +    GI
Sbjct: 120 LCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGI 178

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
             N V+P  + T +T     +P    E       PL+    R G    VA+ V FLA  D
Sbjct: 179 YCNAVAPGIIKTDMT---DVLPDKVKEMYLN-NIPLK----RFGTPEEVANVVGFLASDD 230

Query: 247 SEFVTGHDLVVDGG 260
           S ++TG  + +DGG
Sbjct: 231 SNYITGQVINIDGG 244

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} Length = 269

 Score =  150 bits (382), Expect = 8e-45
 Identities = 69/264 (26%), Positives = 115/264 (43%), Gaps = 15/264 (5%)

Query: 2   ADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG 61
            ++      +    +VA +TGG  G+G   +R   D G  + V    +++          
Sbjct: 12  LEAQTQGPGSMQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHER 71

Query: 62  V--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR 119
                      DV +    +   +  + ++G++D++ +NAGI  + D T + +    +D 
Sbjct: 72  DAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGI--TRDATFMKMTKGDWDA 129

Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
           +   ++  M    K     MVE    G IV   SV GS G   + +Y  +K  + G  ++
Sbjct: 130 VMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKT 188

Query: 180 ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VA 236
            +++    GI VN VSP  LAT +      +P D +E    PQ P+     R G    VA
Sbjct: 189 LALETAKRGITVNTVSPGYLATAMV---EAVPQDVLEAKILPQIPVG----RLGRPDEVA 241

Query: 237 DAVLFLACRDSEFVTGHDLVVDGG 260
             + FL   D+ FVTG DL ++GG
Sbjct: 242 ALIAFLCSDDAGFVTGADLAINGG 265

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} Length = 256

 Score =  150 bits (381), Expect = 1e-44
 Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 16/262 (6%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV- 62
           +   +    +  ++A +TGG  GIG +  +     G R++           +        
Sbjct: 2   AHHHHHHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL 61

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
               +    +V +    K   D      G++D++ +NAGI  + D     +    +  + 
Sbjct: 62  GFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGI--TRDVVFRKMTREDWQAVI 119

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
             N+  +    K     MVE G  G I+  +SV G  G   +T+Y  +K  + G   S +
Sbjct: 120 DTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLA 178

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADA 238
            ++   G+ VN VSP  + T +      +  D +EK+     P+     R G    +   
Sbjct: 179 QEVATKGVTVNTVSPGYIGTDMV---KAIRPDVLEKIVA-TIPVR----RLGSPDEIGSI 230

Query: 239 VLFLACRDSEFVTGHDLVVDGG 260
           V +LA  +S F TG D  ++GG
Sbjct: 231 VAWLASEESGFSTGADFSLNGG 252

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score =  149 bits (378), Expect = 2e-44
 Identities = 51/233 (21%), Positives = 92/233 (39%), Gaps = 19/233 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+ K+A++TG   G+G    +  +     +  +    + L   +A   GV     +  D+
Sbjct: 3   LKKKIAVVTGATGGMGIEIVKDLSRDHI-VYALGRNPEHL-AALAEIEGV---EPIESDI 57

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
             E   +  VD  ++N   +D +   A +  + D T+     + +     +NV   A   
Sbjct: 58  VKEVLEEGGVD-KLKNLDHVDTLVHAAAV--ARDTTIEAGSVAEWHAHLDLNVIVPAELS 114

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +     +      G ++   S AG+      T Y  SKHA+ GL  +   +   +GIRV+
Sbjct: 115 RQLLPALRAA--SGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVS 172

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            VSP    TP+         D     F P+  +E        +A+A+ F+   
Sbjct: 173 TVSPGPTNTPMLQGL----MDSQGTNFRPEIYIE-----PKEIANAIRFVIDA 216

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score =  148 bits (376), Expect = 5e-44
 Identities = 69/253 (27%), Positives = 125/253 (49%), Gaps = 18/253 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            LEGKVA++TG + GIG+  A L A+ GA+ ++     +   + ++  +G      +  +
Sbjct: 6   NLEGKVALVTGASRGIGKAIAELLAERGAK-VIGTATSESGAQAISDYLG-DNGKGMALN 63

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VTN   ++A++ +    +G +DI+ +NAGI  + D  ++ +    +  +   N+  +   
Sbjct: 64  VTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNLTSIFRL 121

Query: 132 VKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            K   R M++   R G I+   SV G+ G   + +Y  +K  VIG  +S + ++   G+ 
Sbjct: 122 SKAVLRGMMKK--RQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVT 179

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VN V+P  + T +T     +  ++       Q P      R G    +A AV FLA  ++
Sbjct: 180 VNTVAPGFIETDMT---KALNDEQRTATLA-QVPAG----RLGDPREIASAVAFLASPEA 231

Query: 248 EFVTGHDLVVDGG 260
            ++TG  L V+GG
Sbjct: 232 AYITGETLHVNGG 244

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score =  149 bits (378), Expect = 5e-44
 Identities = 57/265 (21%), Positives = 115/265 (43%), Gaps = 17/265 (6%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           ++++   N     E KVA++TG   GIG   A++ A   +  ++      +    V   I
Sbjct: 30  LSENKKENYYYCGENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQKSCDSVVDEI 88

Query: 61  GV--GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD 118
                +      DV+ + ++  +++  +  +  +DI+ +NAGI  + D   L +    ++
Sbjct: 89  KSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGI--TRDNLFLRMKNDEWE 146

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
            +   N+  +    +  ++ M+     G I+  +S+ G  G   + +Y  SK  VIG  +
Sbjct: 147 DVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTK 205

Query: 179 SASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---V 235
           S + +L    I VN ++P  +++ +T     +     + +     P      R G    V
Sbjct: 206 SLAKELASRNITVNAIAPGFISSDMT---DKISEQIKKNIIS-NIPAG----RMGTPEEV 257

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGG 260
           A+   FL+   S ++ G   V+DGG
Sbjct: 258 ANLACFLSSDKSGYINGRVFVIDGG 282

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} Length = 246

 Score =  147 bits (374), Expect = 9e-44
 Identities = 77/253 (30%), Positives = 126/253 (49%), Gaps = 16/253 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+GKVA++TG + GIG   A   A  GA ++V     ++   +V   I         V  
Sbjct: 2   LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV N   V  +V  TV  +GQ+DI+ +NAG+  + D  ++ +    +D +   N++G+  
Sbjct: 62  DVANAEDVTNMVKQTVDVFGQVDILVNNAGV--TKDNLLMRMKEEEWDTVINTNLKGVFL 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C K  +R M+     G IV  ASV G  G   + +Y  +K  VIGL ++++ +L    I 
Sbjct: 120 CTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNIT 178

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VN ++P  +AT +T     +  +   ++ +   P      + G    +A+AV F A   S
Sbjct: 179 VNAIAPGFIATDMT---DVLDENIKAEMLK-LIPAA----QFGEAQDIANAVTFFASDQS 230

Query: 248 EFVTGHDLVVDGG 260
           +++TG  L VDGG
Sbjct: 231 KYITGQTLNVDGG 243

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} PDB: 3sj7_A* Length = 246

 Score =  146 bits (372), Expect = 2e-43
 Identities = 71/253 (28%), Positives = 125/253 (49%), Gaps = 16/253 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
              K A++TG + GIG + A   A+ G  + V      E    V   I         +  
Sbjct: 2   KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +V +  +VKA++   V  +G LD++ +NAGI  + D  ++ +    +D +   N++G+  
Sbjct: 62  NVADADEVKAMIKEVVSQFGSLDVLVNNAGI--TRDNLLMRMKEQEWDDVIDTNLKGVFN 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
           C++ A   M+     G+I+  +SV G+ G   + +Y  +K  VIGL +SA+ +L   GI 
Sbjct: 120 CIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGIT 178

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VN V+P  + + +T     +  +  E++   Q PL     R G    +A+ V FLA   +
Sbjct: 179 VNAVAPGFIVSDMT---DALSDELKEQMLT-QIPLA----RFGQDTDIANTVAFLASDKA 230

Query: 248 EFVTGHDLVVDGG 260
           +++TG  + V+GG
Sbjct: 231 KYITGQTIHVNGG 243

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score =  146 bits (371), Expect = 2e-43
 Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 24/263 (9%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI 60
           M  ++   AK     +  ++TGG  GIG   A+  A  G ++ V              S 
Sbjct: 1   MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTH----------RGSG 50

Query: 61  GVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
                  V  DVT+   V     +  ++ G ++++ SNAG+  S+D  ++ +    F+++
Sbjct: 51  APKGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEKV 108

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA 180
              N+ G     + A+R M      G ++   SV+G  G   + +Y  SK  VIG+ RS 
Sbjct: 109 INANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSI 167

Query: 181 SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VAD 237
           + +L    +  N V+P  + T +T     +     +   +   P +    R G    VA 
Sbjct: 168 ARELSKANVTANVVAPGYIDTDMTR---ALDERIQQGALQ-FIPAK----RVGTPAEVAG 219

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
            V FLA  D+ +++G  + VDGG
Sbjct: 220 VVSFLASEDASYISGAVIPVDGG 242

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score =  146 bits (370), Expect = 7e-43
 Identities = 75/253 (29%), Positives = 125/253 (49%), Gaps = 17/253 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L+ +VAI+TG + GIG   A   A  GA  ++     +     +  +      +      
Sbjct: 26  LDKQVAIVTGASRGIGRAIALELARRGAM-VIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +V +   V ALV+ST++ +G L+++ +NAGI  + DQ  + +    +D +   N++ +  
Sbjct: 85  NVNDATAVDALVESTLKEFGALNVLVNNAGI--TQDQLAMRMKDDEWDAVIDTNLKAVFR 142

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +   R M++    G IV   SV GS G   + +Y  +K  V G+ R+ + ++G  GI 
Sbjct: 143 LSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGIT 201

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VNCV+P  + T +T    G+P ++   L   Q PL     R G    +A AV FLA   +
Sbjct: 202 VNCVAPGFIDTDMT---KGLPQEQQTALKT-QIPLG----RLGSPEDIAHAVAFLASPQA 253

Query: 248 EFVTGHDLVVDGG 260
            ++TG  L V+GG
Sbjct: 254 GYITGTTLHVNGG 266

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score =  146 bits (370), Expect = 7e-43
 Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 21/254 (8%)

Query: 1   MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDELGRQVA 57
           MA   M     +   ++A++TG + GIG   AR     G +++  A      +EL  +  
Sbjct: 22  MARPGM----ERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECK 77

Query: 58  TSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAF 117
           ++   G      CD++NE  + ++  +    +  +DI  +NAG+      T+L    S +
Sbjct: 78  SAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPD--TLLSGSTSGW 135

Query: 118 DRLFAINVRGMAACVKHAARVMVE-GGVRGSIVCTASVAG--SCGGKRRTDYHMSKHAVI 174
             +F +NV  ++ C + A + M E     G I+   S++G           Y  +K+AV 
Sbjct: 136 KDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVT 195

Query: 175 GL---VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR 231
            L   +R    +     IR  C+SP  + T      +    ++    +E    L+     
Sbjct: 196 ALTEGLRQELREAQ-THIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLK----- 249

Query: 232 AGHVADAVLFLACR 245
              VA+AV+++   
Sbjct: 250 PEDVAEAVIYVLST 263

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* Length = 248

 Score =  144 bits (366), Expect = 1e-42
 Identities = 68/255 (26%), Positives = 118/255 (46%), Gaps = 18/255 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           KL+GKV+++TG   GIG   A   A  G+ +I+     +               K H V 
Sbjct: 4   KLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVE 63

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            ++ +E  +    +        +DI+ +NAGI  + D+  L +    ++ +  +N+ G  
Sbjct: 64  MNLLSEESINKAFEEIYNLVDGIDILVNNAGI--TRDKLFLRMSLLDWEEVLKVNLTGTF 121

Query: 130 ACVKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              +++ R M++   R G IV  +SV G  G   + +Y  +K  +IG  +S + +L    
Sbjct: 122 LVTQNSLRKMIKQ--RWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRN 179

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           + VN V+P  + T +T     +  +  +K  E Q PL     R G    VA+ VLFL   
Sbjct: 180 VLVNAVAPGFIETDMT---AVLSEEIKQKYKE-QIPLG----RFGSPEEVANVVLFLCSE 231

Query: 246 DSEFVTGHDLVVDGG 260
            + ++TG  + V+GG
Sbjct: 232 LASYITGEVIHVNGG 246

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score =  143 bits (363), Expect = 5e-42
 Identities = 62/254 (24%), Positives = 123/254 (48%), Gaps = 18/254 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            KL G+ A++TG   GIGE  AR F   GA + +    +D+L +++A  +G         
Sbjct: 23  FKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL-KEIAADLG-KDVFVFSA 80

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           ++++   +K L +   +    +DI+ +NAGI  + D   + +    +D + A+N+   + 
Sbjct: 81  NLSDRKSIKQLAEVAEREMEGIDILVNNAGI--TRDGLFVRMQDQDWDDVLAVNLTAAST 138

Query: 131 CVKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +     M+    R G I+   S+ G  G   +T+Y  +K  +IG  ++ + ++    I
Sbjct: 139 LTRELIHSMMRR--RYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNI 196

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
            VNC++P  + + +T     +   + E +     P++    R G    +A A ++LA  +
Sbjct: 197 TVNCIAPGFIKSAMT---DKLNEKQKEAIMA-MIPMK----RMGIGEEIAFATVYLASDE 248

Query: 247 SEFVTGHDLVVDGG 260
           + ++TG  L ++GG
Sbjct: 249 AAYLTGQTLHINGG 262

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score =  145 bits (367), Expect = 6e-42
 Identities = 69/267 (25%), Positives = 123/267 (46%), Gaps = 29/267 (10%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---------- 62
           ++G+V I+TG   GIG   A  FA  GAR +V+ DI   L    A+              
Sbjct: 25  VDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSPASGGSAAQSVVDEITA 83

Query: 63  --GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL 120
             G+      +V +  Q   L+ + V+ +G LD++ +NAGI+   D+ + +     FD +
Sbjct: 84  AGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVR--DRMIANTSEEEFDAV 141

Query: 121 FAINVRGMAACVKHAARVMVEGG-----VRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            A++++G  A ++HAA            V G I+ T+S AG  G   + +Y  +K  +  
Sbjct: 142 IAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIAT 201

Query: 176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHV 235
           L    + ++G +G+ VN ++P    T +T   +       ++ F+   P         +V
Sbjct: 202 LTLVGAAEMGRYGVTVNAIAP-SARTRMTETVFAEMMATQDQDFDAMAP--------ENV 252

Query: 236 ADAVLFLACRDSEFVTGHDLVVDGGFL 262
           +  V++L   ++  VTG    V+GG +
Sbjct: 253 SPLVVWLGSAEARDVTGKVFEVEGGKI 279

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score =  142 bits (360), Expect = 7e-42
 Identities = 54/241 (22%), Positives = 94/241 (39%), Gaps = 35/241 (14%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIA-------DIQDELGRQVATSIGVGKCH 66
           E KVA+ITG + GIGE  AR  A  G  + + A        I  EL ++        +  
Sbjct: 1   EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE-----QGVEVF 55

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
           Y H DV+    V+      ++ +G +D++ +NAG+       + +L    F  +  +N+ 
Sbjct: 56  YHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYFK--RLEELSEEEFHEMIEVNLL 113

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSC--GGKRRTDYHMSKHAVIGLVRSASVQL 184
           G+   +K     +   G   ++V T+ V+      G     Y  +K A   L    + Q+
Sbjct: 114 GVWRTLKAFLDSLKRTG-GLALVTTSDVSARLIPYG---GGYVSTKWAARAL--VRTFQI 167

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
               +R   + P  + T       G P ++               L+   +A+AV  L  
Sbjct: 168 ENPDVRFFELRPGAVDTYFGGSKPGKPKEK-------------GYLKPDEIAEAVRCLLK 214

Query: 245 R 245
            
Sbjct: 215 L 215

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score =  142 bits (361), Expect = 7e-42
 Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 19/255 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            L  KVA++TG + GIG   A   A  GA  +V          +   S+     K   + 
Sbjct: 2   SLNEKVALVTGASRGIGFEVAHALASKGAT-VVGTATSQASAEKFENSMKEKGFKARGLV 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            ++++   ++            +DI+ +NAGI  + D  ++ +    +  +   N+  + 
Sbjct: 61  LNISDIESIQNFFAEIKAENLAIDILVNNAGI--TRDNLMMRMSEDEWQSVINTNLSSIF 118

Query: 130 ACVKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              K   R M++   R G I+   SV GS G   +T+Y  +K  VIG  +S + ++    
Sbjct: 119 RMSKECVRGMMKK--RWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRN 176

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACR 245
           I VN V+P  +AT +T     +  ++   +   + P      + G    +A AV FLA  
Sbjct: 177 ITVNVVAPGFIATDMT---DKLTDEQKSFIAT-KIPSG----QIGEPKDIAAAVAFLASE 228

Query: 246 DSEFVTGHDLVVDGG 260
           +++++TG  L V+GG
Sbjct: 229 EAKYITGQTLHVNGG 243

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score =  141 bits (358), Expect = 4e-41
 Identities = 54/235 (22%), Positives = 98/235 (41%), Gaps = 14/235 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           +  KV +ITG + GIGE  AR     GA++++ A  Q  +   +AT I    G       
Sbjct: 2   VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARI-EAIATEIRDAGGTALAQVL 60

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT+   V A   + V  +G++D++ +NAG++  S   +  +    ++R+  +N++G+  
Sbjct: 61  DVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLS--PLAAVKVDEWERMIDVNIKGVLW 118

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +     +M      G I+   S+           Y  +K AV  +  S  ++     IR
Sbjct: 119 GIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKFAVRAI--SDGLRQESTNIR 175

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           V CV+P  + + L               +        + L+   +A AV  +   
Sbjct: 176 VTCVNPGVVESELAGTITHEETMAAMDTY------RAIALQPADIARAVRQVIEA 224

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} Length = 245

 Score =  140 bits (356), Expect = 4e-41
 Identities = 69/252 (27%), Positives = 112/252 (44%), Gaps = 19/252 (7%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDV 72
           + A+ITG + GIG   A   A+ G  + +      E   +VA      G      +  ++
Sbjct: 2   RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANL 61

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
                  ALV    +  G LD + +NAGI  + D  ++ +    ++ +   N+  +    
Sbjct: 62  LEAEAATALVHQAAEVLGGLDTLVNNAGI--TRDTLLVRMKDEDWEAVLEANLSAVFRTT 119

Query: 133 KHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           + A ++M++   R G IV   SV G  G   + +Y  SK  +IG  R+ + +    GI V
Sbjct: 120 REAVKLMMKA--RFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITV 177

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSE 248
           N V+P  + T +T     +P +  E   + Q P      R G    VA+AV FL    + 
Sbjct: 178 NAVAPGFIETEMT---ERLPQEVKEAYLK-QIPAG----RFGRPEEVAEAVAFLVSEKAG 229

Query: 249 FVTGHDLVVDGG 260
           ++TG  L VDGG
Sbjct: 230 YITGQTLCVDGG 241

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* Length = 269

 Score =  140 bits (356), Expect = 8e-41
 Identities = 75/255 (29%), Positives = 128/255 (50%), Gaps = 20/255 (7%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            L  ++A++TG + GIG   A   A  GA++ V          +V  +I    G+   V 
Sbjct: 25  PLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVK 84

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV+ E +V+AL  + ++ +G+LD++ +NAGI  + D  +L +    +  +  +N+ G+ 
Sbjct: 85  ADVSQESEVEALFAAVIERWGRLDVLVNNAGI--TRDTLLLRMKRDDWQSVLDLNLGGVF 142

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
            C + AA++M++    G I+  ASV G  G   + +Y  +K  VIGL ++ + +L   GI
Sbjct: 143 LCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGI 201

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD 246
            VN V+P  +AT +T       ++   +      PL     R G    VA  V FLA   
Sbjct: 202 TVNAVAPGFIATDMT-------SELAAEKLLEVIPLG----RYGEAAEVAGVVRFLAADP 250

Query: 247 -SEFVTGHDLVVDGG 260
            + ++TG  + +DGG
Sbjct: 251 AAAYITGQVINIDGG 265

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score =  139 bits (354), Expect = 1e-40
 Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 24/251 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
              +  ++TGG  GIG   AR FAD G ++ +             +         V CD+
Sbjct: 19  HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITY----------RSGEPPEGFLAVKCDI 68

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+  QV+       + +G ++++ +NAG+  + DQ ++ +    F  +   N+ G    V
Sbjct: 69  TDTEQVEQAYKEIEETHGPVEVLIANAGV--TKDQLLMRMSEEDFTSVVETNLTGTFRVV 126

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K A R M+    +G +V  +SV G  G   + +Y  SK  ++G  RS + +LG   I  N
Sbjct: 127 KRANRAMLRAK-KGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFN 185

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSEF 249
            V+P  + T +T     +  ++   +   Q PL     R      +A  V FLA  D+ +
Sbjct: 186 VVAPGFVDTDMT---KVLTDEQRANIVS-QVPLG----RYARPEEIAATVRFLASDDASY 237

Query: 250 VTGHDLVVDGG 260
           +TG  + VDGG
Sbjct: 238 ITGAVIPVDGG 248

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score =  140 bits (354), Expect = 1e-40
 Identities = 50/244 (20%), Positives = 96/244 (39%), Gaps = 8/244 (3%)

Query: 3   DSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV 62
            SS    +         ITG  SG GE  AR FA+ G  +++    ++ L + +A  +  
Sbjct: 9   HSSGLVPRGSHMSSTLFITGATSGFGEACARRFAEAGWSLVLTGRREERL-QALAGELSA 67

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
             +   +  DV +   + A VD+  + +  L  + +NAG+   +D      D   +D + 
Sbjct: 68  KTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGTD-PAQSCDLDDWDTMV 126

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
             N++G+    +     ++  G   SIV   SVAG         Y  +K  V     +  
Sbjct: 127 DTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLR 186

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
             L   G+RV  + P    +  +   +G      +K +    P++        +A+ + +
Sbjct: 187 CDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQ-----PEDIAETIFW 241

Query: 242 LACR 245
           +  +
Sbjct: 242 IMNQ 245

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score =  137 bits (348), Expect = 2e-40
 Identities = 32/198 (16%), Positives = 62/198 (31%), Gaps = 27/198 (13%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
               ++ G +  +G             +          GR             V  D+TN
Sbjct: 3   AMKILLIGASGTLGSAVKERLEKKAEVITA--------GRHSGD---------VTVDITN 45

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
              +K + +      G++D + S  G   ++   + +L         +  + G    V  
Sbjct: 46  IDSIKKMYEQ----VGKVDAIVSATGS--ATFSPLTELTPEKNAVTISSKLGGQINLVLL 99

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCV 194
               + + G   S   T  +       +     M+  AV    +SA++++   GIR+N V
Sbjct: 100 GIDSLNDKG---SFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMP-RGIRINTV 155

Query: 195 SPHGLATPLTCHAYGMPA 212
           SP+ L             
Sbjct: 156 SPNVLEESWDKLEPFFEG 173

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G Length = 244

 Score =  138 bits (350), Expect = 3e-40
 Identities = 68/251 (27%), Positives = 123/251 (49%), Gaps = 17/251 (6%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
            V ++TG + GIG+  A      G +++V      +   +V+  I    G+      DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
            E  V+A++ + +  +G +D++ +NAGI  + D  ++ +  S +D +  +N+ G+  C +
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            A ++M++   +G I+  ASV G  G   + +Y  +K  VIG  ++A+ +     I VN 
Sbjct: 120 AATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178

Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRD-SEF 249
           V P  +A+ +T     +  D  +K+     PL     R G    VA  V FLA    + +
Sbjct: 179 VCPGFIASDMT---AKLGEDMEKKILG-TIPLG----RTGQPENVAGLVEFLALSPAASY 230

Query: 250 VTGHDLVVDGG 260
           +TG    +DGG
Sbjct: 231 ITGQAFTIDGG 241

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score =  136 bits (345), Expect = 2e-39
 Identities = 71/253 (28%), Positives = 125/253 (49%), Gaps = 22/253 (8%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
            L GK ++ITG +SGIG   ARL    G++ ++I+   +E  + +  ++         C+
Sbjct: 11  DLTGKTSLITGASSGIGSAIARLLHKLGSK-VIISGSNEEKLKSLGNALK-DNYTIEVCN 68

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           + N+ +   L+         LDI+  NAGI  +SD   + +    FD++  IN++     
Sbjct: 69  LANKEECSNLIS----KTSNLDILVCNAGI--TSDTLAIRMKDQDFDKVIDINLKANFIL 122

Query: 132 VKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            + A + M++   R G I+  +S+ G  G   + +Y  SK  +IG+ +S S ++   GI 
Sbjct: 123 NREAIKKMIQK--RYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGIT 180

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           VN V+P  + + +T     +   + E + + + PL       G    VA AV FLA  ++
Sbjct: 181 VNAVAPGFIKSDMT---DKLNEKQREAIVQ-KIPLG----TYGIPEDVAYAVAFLASNNA 232

Query: 248 EFVTGHDLVVDGG 260
            ++TG  L V+GG
Sbjct: 233 SYITGQTLHVNGG 245

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A Length = 454

 Score =  140 bits (356), Expect = 3e-39
 Identities = 68/253 (26%), Positives = 117/253 (46%), Gaps = 19/253 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L+GKVA++TG A GIG T A +FA  GA ++ I    D     +           +  DV
Sbjct: 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAID--VDGAAEDLKRVADKVGGTALTLDV 268

Query: 73  TNECQVKALVDSTVQNYG-QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           T +  V  +     +++G ++DI+ +NAGI  + D+ + ++D   +D + A+N+      
Sbjct: 269 TADDAVDKITAHVTEHHGGKVDILVNNAGI--TRDKLLANMDEKRWDAVIAVNLLAPQRL 326

Query: 132 VKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +        G    G ++  +S+AG  G + +T+Y  +K  +IGL  + +  L   GI 
Sbjct: 327 TEGLVGNGTIG--EGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGIT 384

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDS 247
           +N V+P  + T +T     +P    E        L     + G    VA+ + + A   S
Sbjct: 385 INAVAPGFIETKMTE---AIPLATREVGRR-LNSLF----QGGQPVDVAELIAYFASPAS 436

Query: 248 EFVTGHDLVVDGG 260
             VTG+ + V G 
Sbjct: 437 NAVTGNTIRVCGQ 449

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 Length = 249

 Score =  136 bits (344), Expect = 3e-39
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 27/251 (10%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           +  K  ++   + GIG   A + +  GA + + A  ++ L R            YV CD+
Sbjct: 17  IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGH--------RYVVCDL 68

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
                    +D   +   ++DI+  NAG          +L    F          M   V
Sbjct: 69  RK------DLDLLFEKVKEVDILVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMIKIV 120

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           ++    M E G  G IV   S +     +     + ++ A+ G +++ S ++  +GI VN
Sbjct: 121 RNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVN 179

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH---VADAVLFLACRDSEF 249
           CV+P    T        + ++E +K  E Q P+     R      +A  V FL    + +
Sbjct: 180 CVAPGWTETERV---KELLSEEKKKQVESQIPMR----RMAKPEEIASVVAFLCSEKASY 232

Query: 250 VTGHDLVVDGG 260
           +TG  +VVDGG
Sbjct: 233 LTGQTIVVDGG 243

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  142 bits (360), Expect = 4e-39
 Identities = 61/263 (23%), Positives = 115/263 (43%), Gaps = 34/263 (12%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG---------RQVATSIGV- 62
            + KV IITG   G+G+  +  FA  GA+ +V+ D+   L            V   I   
Sbjct: 6   FKDKVVIITGAGGGLGKYYSLEFAKLGAK-VVVNDLGGALNGQGGNSKAADVVVDEIVKN 64

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
            G     + +V +      +V++ V+N+G + ++ +NAGIL   D ++  +    +  + 
Sbjct: 65  GGVAVADYNNVLD---GDKIVETAVKNFGTVHVIINNAGILR--DASMKKMTEKDYKLVI 119

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            +++ G  A  K A     +    G IV T+S AG  G   + +Y  +K A++G   + +
Sbjct: 120 DVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLA 178

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
            +   + I+ N ++P    + +T     +    + +   P+            VA  VL+
Sbjct: 179 KEGAKYNIKANAIAPLA-RSRMT---ESIMPPPMLEKLGPE-----------KVAPLVLY 223

Query: 242 LACRDSEFVTGHDLVVDGGFLIR 264
           L+  ++E +TG    V  GF  +
Sbjct: 224 LSSAENE-LTGQFFEVAAGFYAQ 245

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score =  133 bits (336), Expect = 1e-35
 Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 26/251 (10%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
            L+ KV +ITG  +G+G+  A+ FA +GA+ +V+ D +D    +    I    G+     
Sbjct: 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAK-VVVNDFKD--ATKTVDEIKAAGGEAWPDQ 375

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            DV  +   +A++ + +  YG +DI+ +NAGIL   D++   +    +D +  +++ G  
Sbjct: 376 HDVAKD--SEAIIKNVIDKYGTIDILVNNAGILR--DRSFAKMSKQEWDSVQQVHLIGTF 431

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A    VE    G I+   S +G  G   + +Y  SK  ++GL ++ +++   + I
Sbjct: 432 NLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNI 490

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           +VN V+PH   T +T     +  ++ + L+               VA  +++L   D   
Sbjct: 491 KVNIVAPHA-ETAMT---LSIMREQDKNLYHAD-----------QVAPLLVYLGTDDVP- 534

Query: 250 VTGHDLVVDGG 260
           VTG    + GG
Sbjct: 535 VTGETFEIGGG 545

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score =  134 bits (341), Expect = 7e-39
 Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 13/238 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYV 68
           + L+GKVA+ITG +SGIGE TAR  A  GA + + A   ++L R +   +     K H +
Sbjct: 3   SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKL-RALGDELTAAGAKVHVL 61

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV +   V A V STV+  G LDI+ +NAGI+      V D D + + R+   N+ G+
Sbjct: 62  ELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLLG--PVEDADTTDWTRMIDTNLLGL 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               + A   ++    +G++V  +S+AG    +    Y  +K  V     +   ++   G
Sbjct: 120 MYMTRAALPHLLRS--KGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERG 177

Query: 189 IRVNCVSPHGLATPLTCH-AYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
           +RV  + P    T L  H  +    +  E+       L+     A  +A+AV +    
Sbjct: 178 VRVVVIEPGTTDTELRGHITHTATKEMYEQRISQIRKLQ-----AQDIAEAVRYAVTA 230

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score =  135 bits (343), Expect = 2e-38
 Identities = 58/263 (22%), Positives = 116/263 (44%), Gaps = 34/263 (12%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG---------RQVATSIGV- 62
            +G+V ++TG   G+G   A  FA+ GA  +V+ D+  +            +V   I   
Sbjct: 7   FDGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRRR 65

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
            GK    +  V      + LV + +  +G++D++ +NAGIL   D++   +    +D + 
Sbjct: 66  GGKAVANYDSVE---AGEKLVKTALDTFGRIDVVVNNAGILR--DRSFSRISDEDWDIIQ 120

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            +++RG     + A   M +    G I+ TAS +G  G   + +Y  +K  ++GL  +  
Sbjct: 121 RVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLV 179

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           ++   + I  N ++P    + +T     +  +++ +  +P+           +VA  VL+
Sbjct: 180 IEGRKNNIHCNTIAP-NAGSRMT---ETVMPEDLVEALKPE-----------YVAPLVLW 224

Query: 242 LACRDSEFVTGHDLVVDGGFLIR 264
           L     E   G    V  G++ +
Sbjct: 225 LCHESCE-ENGGLFEVGAGWIGK 246

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score =  134 bits (340), Expect = 2e-38
 Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 13/248 (5%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHG---ARMIVIA---DIQDELGRQVA 57
           S    A  +L  K  +ITG ++GIG+ TA  + +      ++I+ A   +  +EL + + 
Sbjct: 22  SQGRKAAERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTID 81

Query: 58  TSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAF 117
                 K H    D+T   ++K  +++  Q +  +DI+ +NAG    SD  V  +     
Sbjct: 82  QEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGSD-RVGQIATEDI 140

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
             +F  NV  +    +    +       G IV   S+AG       + Y  SK AV    
Sbjct: 141 QDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFT 199

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
            S   +L    IRV  ++P  + T  +   Y    ++ + +++  TPL      A  VAD
Sbjct: 200 DSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLM-----ADDVAD 254

Query: 238 AVLFLACR 245
            +++   R
Sbjct: 255 LIVYATSR 262

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score =  133 bits (336), Expect = 6e-38
 Identities = 55/242 (22%), Positives = 102/242 (42%), Gaps = 11/242 (4%)

Query: 4   SSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVG 63
           +           K+ +ITG +SGIGE  AR F++ G  ++++A   + L      ++ + 
Sbjct: 5   TGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERL-----KALNLP 59

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
                  DVT++      +    + YG  D + +NAG++      +   + + + R+F +
Sbjct: 60  NTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLLG--QIDTQEANEWQRMFDV 117

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           NV G+   ++     M      G+I+  +S+AG         Y  +K AV  +  +   +
Sbjct: 118 NVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREE 176

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           +    +RV  ++P  + T L  H       +    +       G VL A  VA AVLF  
Sbjct: 177 VAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDM---GGVLAADDVARAVLFAY 233

Query: 244 CR 245
            +
Sbjct: 234 QQ 235

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score =  129 bits (326), Expect = 1e-36
 Identities = 48/231 (20%), Positives = 91/231 (39%), Gaps = 12/231 (5%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC 76
           + ++TG  +G GE   R F   G ++I     Q+ L +++   +G    +    DV N  
Sbjct: 2   IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERL-QELKDELG-DNLYIAQLDVRNRA 59

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
            ++ ++ S    +  +DI+ +NAG+    +          ++ +   N +G+    +   
Sbjct: 60  AIEEMLASLPAEWCNIDILVNNAGLALGME-PAHKASVEDWETMIDTNNKGLVYMTRAVL 118

Query: 137 RVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSP 196
             MVE    G I+   S AGS        Y  +K  V     +    L    +RV  + P
Sbjct: 119 PGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEP 177

Query: 197 HGL--ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
            GL   T  +   +     + EK ++    L         V++AV +++  
Sbjct: 178 -GLVGGTEFSNVRFKGDDGKAEKTYQNTVALT-----PEDVSEAVWWVSTL 222

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score =  134 bits (340), Expect = 2e-36
 Identities = 56/263 (21%), Positives = 119/263 (45%), Gaps = 34/263 (12%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADI---------QDELGRQVATSIGV- 62
            +G+VA++TG  +G+G   A LFA+ GA+ +V+ D+                V   I   
Sbjct: 17  YDGRVAVVTGAGAGLGREYALLFAERGAK-VVVNDLGGTHSGDGASQRAADIVVDEIRKA 75

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
            G+    +  V +      ++++ ++ +G++DI+ +NAGIL   D++++      ++ + 
Sbjct: 76  GGEAVADYNSVID---GAKVIETAIKAFGRVDILVNNAGILR--DRSLVKTSEQDWNLVN 130

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
            ++++G   C + A   M +    G I+ T+S +G  G   + +Y  +K  +IGL  + +
Sbjct: 131 DVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVA 189

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           ++   + +  N + P   A+ +T    G+  D +    +P+            +A  V +
Sbjct: 190 IEGARNNVLCNVIVPTA-ASRMT---EGILPDILFNELKPK-----------LIAPVVAY 234

Query: 242 LACRDSEFVTGHDLVVDGGFLIR 264
           L     E   G  +    G+  +
Sbjct: 235 LCHESCE-DNGSYIESAAGWATK 256

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score =  127 bits (321), Expect = 4e-36
 Identities = 37/226 (16%), Positives = 77/226 (34%), Gaps = 22/226 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
            + +ITG +SG+G   A+L+   G    +    + +L   V   +      Y   D+ + 
Sbjct: 2   SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL-STVTNCLS-NNVGYRARDLASH 59

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
            +V+ L +           +  +AG        + + D      L   N+      ++  
Sbjct: 60  QEVEQLFEQL---DSIPSTVVHSAGSGYFG--LLQEQDPEQIQTLIENNLSSAINVLREL 114

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
            +   +     ++V   S A      + + Y   K AV GL+ S  ++L    +++  V 
Sbjct: 115 VKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVY 172

Query: 196 PHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           P G+AT          + +        +  +         A  +  
Sbjct: 173 PGGMATEFWET-----SGKSLDTSSFMSAED--------AALMIHG 205

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score =  124 bits (315), Expect = 2e-35
 Identities = 37/203 (18%), Positives = 72/203 (35%), Gaps = 22/203 (10%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ 77
            +ITG   G+G   AR     G  +++       L  ++A  +G      +  D+ +E +
Sbjct: 3   VLITGATGGLGGAFARALK--GHDLLLSGRRAGAL-AELAREVGA---RALPADLADELE 56

Query: 78  VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
            KAL++      G LD++    G   +   +V +      + + A ++   A  +KH   
Sbjct: 57  AKALLEE----AGPLDLLVHAVGK--AGRASVREAGRDLVEEMLAAHLLTAAFVLKH--- 107

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH 197
                      V   +            Y  +K A+   + +A  +L   G+ +  V   
Sbjct: 108 -ARFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLP 165

Query: 198 GLATPLTCHA-----YGMPADEV 215
            +AT L           +  +E 
Sbjct: 166 AVATGLWAPLGGPPKGALSPEEA 188

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score =  100 bits (250), Expect = 1e-25
 Identities = 37/200 (18%), Positives = 65/200 (32%), Gaps = 20/200 (10%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
              ++TG   GIG    +          +IA  +D        SI   + H +   VT +
Sbjct: 4   GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCD 63

Query: 76  CQVKALVDSTVQNYG--QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
             +   V    +  G   L ++ +NAG+L  S  T  + + +       +N   +    +
Sbjct: 64  KSLDTFVSKVGEIVGSDGLSLLINNAGVL-LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQ 122

Query: 134 H----------AARVMVEGGVRGSIVCTASVAGSCG-------GKRRTDYHMSKHAVIGL 176
                                R +++  +S  GS               Y MSK A+   
Sbjct: 123 KLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMF 182

Query: 177 VRSASVQLGVHGIRVNCVSP 196
            R+ +V L    + V    P
Sbjct: 183 GRTLAVDLKDDNVLVVNFCP 202

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} Length = 311

 Score = 99.3 bits (247), Expect = 9e-25
 Identities = 49/315 (15%), Positives = 92/315 (29%), Gaps = 99/315 (31%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
            + + A++TGG  GIG    +  + +G   +V+       G +    +         +  
Sbjct: 10  TKRRCAVVTGGNKGIGFEICKQLSSNGIM-VVLTCRDVTKGHEAVEKLKNSNHENVVFHQ 68

Query: 70  CDVTNECQ-VKALVDSTVQNYGQLDIMFSNAGILSSSD---------------------- 106
            DVT+    + +L D    ++G+LDI+ +NAG+   S                       
Sbjct: 69  LDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKI 128

Query: 107 ------QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG- 159
                 Q ++   +   +    IN  G+ +  +    ++        IV  +S  GS   
Sbjct: 129 YEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD-SPRIVNVSSSTGSLKY 187

Query: 160 ------------------------------------------GKRRTDYHMSKHAVIGLV 177
                                                           Y  SK  +    
Sbjct: 188 VSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYT 247

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
           R  + ++     +VNCV P  + T +                   T  EG        A+
Sbjct: 248 RVLANKIP--KFQVNCVCPGLVKTEMNYGIG------------NYTAEEG--------AE 285

Query: 238 AVLFLACRDSEFVTG 252
            V+ +A    +  +G
Sbjct: 286 HVVRIALFPDDGPSG 300

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} Length = 281

 Score = 97.0 bits (242), Expect = 4e-24
 Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 5/188 (2%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           KV ++TG +SG G   A      G    VI   +         +    +   +  DVT+ 
Sbjct: 6   KVWLVTGASSGFGRAIAEAAVAAGDT--VIGTARRTEALDDLVAAYPDRAEAISLDVTDG 63

Query: 76  CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA 135
            ++  +    +  YG++D++ +NAG          +        LF ++V G A   +  
Sbjct: 64  ERIDVVAADVLARYGRVDVLVNNAGRTQVG--AFEETTERELRDLFELHVFGPARLTRAL 121

Query: 136 ARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVS 195
              M E G  GS+V  +S  G       + Y  +K A+  L    + ++   GI+V  V 
Sbjct: 122 LPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVE 180

Query: 196 PHGLATPL 203
           P    T L
Sbjct: 181 PGAFRTNL 188

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} Length = 324

 Score = 96.7 bits (241), Expect = 9e-24
 Identities = 46/223 (20%), Positives = 80/223 (35%), Gaps = 11/223 (4%)

Query: 14  EGKVAIITGGASGIGETTARLFADHG------ARMIVIADIQDELGRQVATSIGVGKCHY 67
             K+ +ITG +SG G  TA   A  G       R IV  +  +                 
Sbjct: 4   SKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRT 63

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  DV ++  V   +D  +   G++D++  NAG +              F  L+ INV  
Sbjct: 64  LELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFG--PAEAFTPEQFAELYDINVLS 121

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSASVQLGV 186
                + A   M      G ++  +S + + G       Y  +K A+  +    + +L  
Sbjct: 122 TQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSR 180

Query: 187 HGIRVNCVSPHGLATPLTCHAY-GMPADEVEKLFEPQTPLEGV 228
            GI  + + P    +     A+ G+P D   +      P  G+
Sbjct: 181 WGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGL 223

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... Length = 327

 Score = 94.0 bits (234), Expect = 1e-22
 Identities = 50/208 (24%), Positives = 79/208 (37%), Gaps = 12/208 (5%)

Query: 16  KVAIITGGASGIGETTARLFA-DHGARMIVIA------DIQDELGRQVATSIGVGKCHYV 68
            V +ITG +SGIG   A   A D      V A                A +   G    +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV +   V A  +   +  G++D++  NAG+       +  L   A   +  +NV G 
Sbjct: 63  QLDVRDSKSVAAARERVTE--GRVDVLVCNAGLGLLG--PLEALGEDAVASVLDVNVVGT 118

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              ++     M   G  G ++ T SV G  G      Y  SK A+ GL  S +V L   G
Sbjct: 119 VRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 177

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVE 216
           + ++ +    + T       G P + ++
Sbjct: 178 VHLSLIECGPVHTAFMEKVLGSPEEVLD 205

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 91.3 bits (227), Expect = 5e-22
 Identities = 37/199 (18%), Positives = 61/199 (30%), Gaps = 19/199 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGV--GKCHYVHCDV 72
              +ITG   G+G    +   +       +    ++    +    +       H +  D+
Sbjct: 22  NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 81

Query: 73  TNECQVKALVD--STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            N      LV     V     L+++F+NAGI       +  +           N      
Sbjct: 82  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIM 140

Query: 131 CVKH----------AARVMVEGGVRGSIVCTASVAGSCGGKRRTD---YHMSKHAVIGLV 177
             K           A      G  R +I+  +S+ GS  G        Y  SK A+    
Sbjct: 141 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 200

Query: 178 RSASVQLGVHGIRVNCVSP 196
           +S SV L    I    + P
Sbjct: 201 KSLSVDLYPQRIMCVSLHP 219

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 80.5 bits (199), Expect = 4e-18
 Identities = 50/289 (17%), Positives = 87/289 (30%), Gaps = 78/289 (26%)

Query: 15  GKVAIITGGASGIGETTAR-LFADHGARMIVIA-DIQDELGRQVATSI--GVGKCHYVHC 70
             VA++TGG  GIG    R L       +++ A D+    G+     +        +   
Sbjct: 4   IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDV--TRGQAAVQQLQAEGLSPRFHQL 61

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D+ +   ++AL D   + YG LD++ +NAGI                +     N  G   
Sbjct: 62  DIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ--AEVTMKTNFFGTRD 119

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCG------------------------------- 159
                  ++      G +V  +S+                                    
Sbjct: 120 VCTELLPLIKPQ---GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVE 176

Query: 160 ----------GKRRTDYHMSKHAVIGLVRSASVQLGVH----GIRVNCVSPHGLATPLTC 205
                     G   + Y ++K  V  L R  + +L        I +N   P  + T +  
Sbjct: 177 DTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAG 236

Query: 206 HAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC--RDSEFVTG 252
                           ++P EG        A+  ++LA    D+E   G
Sbjct: 237 P------------KATKSPEEG--------AETPVYLALLPPDAEGPHG 265

>4alk_A ENR, enoyl-[acyl-carrier-protein] reductase [NADPH]; oxidoreductase, short-chain dehydrogenase/reductase superfam fatty acid biosynthesis; HET: NAP E9P GLU; 1.90A {Staphylococcus aureus} PDB: 4alj_A* 4ali_A* 4alm_A 4aln_A 3gr6_A* 3gns_A* 3gnt_A 4all_A* Length = 282

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 61/274 (22%), Positives = 108/274 (39%), Gaps = 50/274 (18%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           LE K  +I G A+      G+    A++    GA+++     + E   +++      +  
Sbjct: 30  LENKTYVIMGIANKRSIAFGV----AKVLDQLGAKLVFT--YRKERSRKELEKLLEQLNQ 83

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAF 117
            + H    DV ++ +V    +   ++ G +D     I F+N   L        +     F
Sbjct: 84  PEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGR---FSETSREGF 140

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
                I+   +      A ++M EG   GSIV   +  G           +  + V+G+ 
Sbjct: 141 LLAQDISSYSLTIVAHEAKKLMPEG---GSIV-ATTYLGG----EFA---VQNYNVMGVA 189

Query: 178 RSA--------SVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEG 227
           +++        ++ LG   IRVN +S    A P+ T  A G+   + + K  E + PL+ 
Sbjct: 190 KASLEANVKYLALDLGPDNIRVNAIS----AGPIRTLSAKGVGGFNTILKEIEERAPLKR 245

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            V     V     +L    S  VTG ++ VD GF
Sbjct: 246 NV-DQVEVGKTAAYLLSDLSSGVTGENIHVDSGF 278

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* Length = 266

 Score = 76.8 bits (190), Expect = 8e-17
 Identities = 75/274 (27%), Positives = 112/274 (40%), Gaps = 50/274 (18%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           LEG+  ++ G A+      GI    AR   + GAR+I       E L + V   A ++  
Sbjct: 5   LEGRNIVVMGVANKRSIAWGI----ARSLHEAGARLIFT--YAGERLEKSVHELAGTLDR 58

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM-----FSNAGILSSSDQTVLDLDFSAF 117
                + CDVTN+ +++    S  +  G +  +     F+N   L       L+ +   F
Sbjct: 59  NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGE---YLNTNRDGF 115

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL- 176
                I+   + A VK A  +M EG   GSIV T +  G           M  + V+G+ 
Sbjct: 116 LLAHNISSYSLTAVVKAARPMMTEG---GSIV-TLTYLGG----ELV---MPNYNVMGVA 164

Query: 177 -------VRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEG 227
                  V+  +  LG   IRVN +S    A P+ T  A G+   + + K  E + PL  
Sbjct: 165 KASLDASVKYLAADLGKENIRVNSIS----AGPIRTLSAKGISDFNSILKDIEERAPLRR 220

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                  V D   FL    S  +TG +L VD GF
Sbjct: 221 TT-TPEEVGDTAAFLFSDMSRGITGENLHVDSGF 253

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 2jjy_A* Length = 280

 Score = 75.0 bits (185), Expect = 5e-16
 Identities = 60/275 (21%), Positives = 101/275 (36%), Gaps = 53/275 (19%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDELGRQV---ATSIGVG 63
           L GK  +ITG  S      GI    A+     GA +        +   +V          
Sbjct: 24  LAGKKILITGLLSNKSIAYGI----AKAMHREGAELAFT--YVGQFKDRVEKLCAEFNPA 77

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSS--DQTVLDLDFSA 116
               + CDV ++ ++K L     + +  LD     I F+    L  +  D    +     
Sbjct: 78  AV--LPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTRE----G 131

Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           F     I+    AA  K    +M       S+V   +  G+     +    M  +  +G+
Sbjct: 132 FSIAHDISAYSFAALAKEGRSMMKNRN--ASMV-ALTYIGA----EKA---MPSYNTMGV 181

Query: 177 VRSA--------SVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLE 226
            +++        ++ LG  GI+VN VS    A P+ T  A G+    ++       +PL+
Sbjct: 182 AKASLEATVRYTALALGEDGIKVNAVS----AGPIKTLAASGISNFKKMLDYNAMVSPLK 237

Query: 227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             V     V + V FL    +  +TG  + VD G+
Sbjct: 238 KNV-DIMEVGNTVAFLCSDMATGITGEVVHVDAGY 271

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* Length = 261

 Score = 74.1 bits (183), Expect = 7e-16
 Identities = 57/272 (20%), Positives = 106/272 (38%), Gaps = 48/272 (17%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIV--IADIQDELGRQVATSIGVGK 64
           L GK A++ G  +       I    A    + GA + +   A+       ++A ++G   
Sbjct: 6   LSGKKALVMGVTNQRSLGFAI----AAKLKEAGAEVALSYQAERLRPEAEKLAEALGGAL 61

Query: 65  CHYVHCDVTNECQVKALVDSTVQNYGQLDIM-----FSNAGILSSSDQTVLDLDFSAFDR 119
                 DVT + ++ AL     + +G LD +     F+    +       +D     +  
Sbjct: 62  L--FRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGR---YIDTRRQDWLL 116

Query: 120 LFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRS 179
              ++   + A  + A  ++ EG   G IV T +   S     +    + K+ V+ + ++
Sbjct: 117 ALEVSAYSLVAVARRAEPLLREG---GGIV-TLTYYAS----EKV---VPKYNVMAIAKA 165

Query: 180 A--------SVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEGVV 229
           A        + +LG  G+RVN +S    A P+ T  A  +P   ++        PL   +
Sbjct: 166 ALEASVRYLAYELGPKGVRVNAIS----AGPVRTVAARSIPGFTKMYDRVAQTAPLRRNI 221

Query: 230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                V +  LFL    +  +TG  + VD G+
Sbjct: 222 -TQEEVGNLGLFLLSPLASGITGEVVYVDAGY 252

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... Length = 269

 Score = 73.4 bits (181), Expect = 1e-15
 Identities = 53/279 (18%), Positives = 99/279 (35%), Gaps = 49/279 (17%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH 66
           L+GK  +++G  +       I    AR+  + GA++++    +  L +++   +   K  
Sbjct: 5   LDGKRILVSGIITDSSIAFHI----ARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAP 59

Query: 67  YVHCDVTNECQVKALVDSTVQNYG---QLD-----IMFSNAGILSSSDQTVLDLDFSAFD 118
            +  DV NE  + +L     +  G   +LD     I F     +  +     D  ++   
Sbjct: 60  LLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINP--FFDAPYADVS 117

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVR 178
           +   I+    A+  K    +M  GG   SIV            R     M  +  + + +
Sbjct: 118 KGIHISAYSYASMAKALLPIMNPGG---SIVGM-----DFDPSR----AMPAYNWMTVAK 165

Query: 179 SA---SVQ-----LGVHGIRVNCVSP--------HGLATPLTCHAYGMPADEVEKLFEPQ 222
           SA     +      G +G+R N V+           +         G     +E+ ++ +
Sbjct: 166 SALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQR 225

Query: 223 TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            P+   +  A  VA  V  L        TG  +  DGG 
Sbjct: 226 APIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* Length = 275

 Score = 72.2 bits (178), Expect = 4e-15
 Identities = 72/274 (26%), Positives = 113/274 (41%), Gaps = 52/274 (18%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           L+GK  +I G A+      GI    A+   + GA +       +E L ++V   A  +  
Sbjct: 4   LKGKKGLIVGVANNKSIAYGI----AQSCFNQGATLAFT--YLNESLEKRVRPIAQELNS 57

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAF 117
                   DV+ E   K+L +S  ++ G LD     + F+    L  S   +L+   SAF
Sbjct: 58  PYV--YELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGS---LLETSKSAF 112

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL- 176
           +    I+V  +         ++  G    S++ T S  GS     +    M+ + V+GL 
Sbjct: 113 NTAMEISVYSLIELTNTLKPLLNNG---ASVL-TLSYLGS----TKY---MAHYNVMGLA 161

Query: 177 -------VRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEG 227
                  VR  +V LG H IRVN +S    A P+ T  + G+     + K  E   PL  
Sbjct: 162 KAALESAVRYLAVDLGKHHIRVNALS----AGPIRTLASSGIADFRMILKWNEINAPLRK 217

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            V     V +A ++L    S  V+G    VD G+
Sbjct: 218 NV-SLEEVGNAGMYLLSSLSSGVSGEVHFVDAGY 250

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* Length = 293

 Score = 71.1 bits (175), Expect = 1e-14
 Identities = 73/283 (25%), Positives = 117/283 (41%), Gaps = 52/283 (18%)

Query: 4   SSMCNAKNKLEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV 56
            SM      L+GK  +I G A+      GI    A+   + GA +      Q + L ++V
Sbjct: 20  GSMTAQSGLLQGKRGLILGVANNRSIAWGI----AKAAREAGAELAFT--YQGDALKKRV 73

Query: 57  ---ATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM-----FSNAGILSSSDQT 108
              A  +G       HCDV +   + A+ ++  + +G+LD +     FS+   L+     
Sbjct: 74  EPLAEELGAFVA--GHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGR--- 128

Query: 109 VLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM 168
            +D   + F     I+V  + A  + A ++M +G   GSI+ T +  G+     +    M
Sbjct: 129 YIDTSEANFTNTMLISVYSLTAVSRRAEKLMADG---GSIL-TLTYYGA----EKV---M 177

Query: 169 SKHAVIGL--------VRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKL 218
             + V+G+        V+  +V LG   IRVN +S    A P+ T  A G+     + K 
Sbjct: 178 PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAIS----AGPIKTLAASGIGDFRYILKW 233

Query: 219 FEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            E   PL   V     V D  L+     S  VTG     D G+
Sbjct: 234 NEYNAPLRRTV-TIDEVGDVGLYFLSDLSRSVTGEVHHADSGY 275

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} Length = 285

 Score = 70.7 bits (174), Expect = 1e-14
 Identities = 66/274 (24%), Positives = 108/274 (39%), Gaps = 51/274 (18%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           LEGK A+ITG A+      GI    A+ F   GA++          L ++V   A   G 
Sbjct: 19  LEGKRALITGVANERSIAYGI----AKSFHREGAQLAFT--YATPKLEKRVREIAKGFGS 72

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSSDQTVLDLDFSAF 117
                V CDV+ +  +K L     +N+G LD     I ++           V+D     F
Sbjct: 73  DLV--VKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGG---VIDTSREGF 127

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLV 177
                I+V  + A  +    +M      G+IV T S  G+     +    +  + V+G+ 
Sbjct: 128 KIAMDISVYSLIALTRELLPLMEGRN--GAIV-TLSYYGA----EKV---VPHYNVMGIA 177

Query: 178 RSA--------SVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEG 227
           ++A        +  +  HG R+N +S    A P+ T  AY +     + +      P   
Sbjct: 178 KAALESTVRYLAYDIAKHGHRINAIS----AGPVKTLAAYSITGFHLLMEHTTKVNPFGK 233

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            +     V D  +FL    +  +TG  + VD G+
Sbjct: 234 PI-TIEDVGDTAVFLCSDWARAITGEVVHVDNGY 266

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* Length = 296

 Score = 70.4 bits (173), Expect = 3e-14
 Identities = 66/274 (24%), Positives = 104/274 (37%), Gaps = 52/274 (18%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           +EGK  +I G A+      GI    A+     GA + +      E   ++V   A S+GV
Sbjct: 28  MEGKKGVIIGVANDKSLAWGI----AKAVCAQGAEVALT--YLSETFKKRVDPLAESLGV 81

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM-----FSNAGILSSSDQTVLDLDFSAF 117
                V CDV++   V  +     + +G LD +     FS+   L       +D     F
Sbjct: 82  KLT--VPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGR---YVDTSLGNF 136

Query: 118 DRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL- 176
                I+          A  +M  G   GSI+ T S  G+     +    +  + V+G+ 
Sbjct: 137 LTSMHISCYSFTYIASKAEPLMTNG---GSIL-TLSYYGA----EKV---VPHYNVMGVC 185

Query: 177 -------VRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLEG 227
                  V+  +V LG   IRVN +S    A P+ T  + G+     +    +  +PL  
Sbjct: 186 KAALEASVKYLAVDLGKQQIRVNAIS----AGPVRTLASSGISDFHYILTWNKYNSPLRR 241

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                  V  A L+L        TG  + VD G+
Sbjct: 242 NT-TLDDVGGAALYLLSDLGRGTTGETVHVDCGY 274

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} Length = 271

 Score = 69.5 bits (171), Expect = 4e-14
 Identities = 65/276 (23%), Positives = 106/276 (38%), Gaps = 55/276 (19%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           L+GK  ++TG  S      GI    A+     GA +        +    ++   A   G 
Sbjct: 12  LDGKRILLTGLLSNRSIAYGI----AKACKREGAELAFT--YVGDRFKDRITEFAAEFGS 65

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLD-----IMFSNAGILSSS--DQTVLDLDFS 115
                  CDV ++ Q+ AL  S   ++  LD     I F+    ++    D    +    
Sbjct: 66  ELV--FPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRE---- 119

Query: 116 AFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG 175
            F     I+     A  K A  ++ +     S++ T S  G+     R    +  +  +G
Sbjct: 120 NFRIAHDISAYSFPALAKAALPMLSDD---ASLL-TLSYLGA----ERA---IPNYNTMG 168

Query: 176 LVRSA--------SVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPL 225
           L ++A        +V LG  G+RVN +S    A P+ T  A G+    ++    E  +PL
Sbjct: 169 LAKAALEASVRYLAVSLGAKGVRVNAIS----AGPIKTLAASGIKSFGKILDFVESNSPL 224

Query: 226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
           +  V     V +A  FL    +  VT   + VD GF
Sbjct: 225 KRNV-TIEQVGNAGAFLLSDLASGVTAEVMHVDSGF 259

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} Length = 291

 Score = 69.2 bits (170), Expect = 5e-14
 Identities = 46/233 (19%), Positives = 77/233 (33%), Gaps = 33/233 (14%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
              +  +ITG  SG+G  TAR  A  GA  +++A      G   A ++  G+      D+
Sbjct: 14  FAQRTVVITGANSGLGAVTARELARRGAT-VIMAVRDTRKGEAAARTMA-GQVEVRELDL 71

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +   V+   D         D++ +NAGI++      +D     F+     N  G  A  
Sbjct: 72  QDLSSVRRFAD----GVSGADVLINNAGIMAVPYALTVD----GFESQIGTNHLGHFALT 123

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD-------------YHMSKHAVIGLVRS 179
                 +        +V  +S+A   G     D             Y  SK A +     
Sbjct: 124 NLLLPRL-----TDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSE 178

Query: 180 ASVQLGVHGIRVNCVSPH-GLA-TPLTCHAYGMPADEVEKLFEP---QTPLEG 227
              +L   G  +  ++ H G + T L   +     D +              G
Sbjct: 179 LQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDALMSAATRVVATDADFG 231

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* Length = 265

 Score = 67.6 bits (166), Expect = 1e-13
 Identities = 62/275 (22%), Positives = 105/275 (38%), Gaps = 53/275 (19%)

Query: 13  LEGKVAIITGGAS------GIGETTARLFADHGARMIVIADIQDE-LGRQV---ATSIGV 62
           L GK  ++TG AS      GI    A+     GA +      Q++ L  +V   A  +G 
Sbjct: 7   LSGKRILVTGVASKLSIAYGI----AQAMHREGAELAFT--YQNDKLKGRVEEFAAQLGS 60

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM-----FSNAGILSSSDQTVLD-LDFSA 116
                + CDV  +  +  +     + + + D       F+    L       ++ +    
Sbjct: 61  DIV--LQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGD---YVNAVTREG 115

Query: 117 FDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL 176
           F     I+     A  K    ++  G    +++ T S  G+     R    +  + V+GL
Sbjct: 116 FKIAHDISSYSFVAMAKACRSMLNPG---SALL-TLSYLGA----ERA---IPNYNVMGL 164

Query: 177 --------VRSASVQLGVHGIRVNCVSPHGLATPL-TCHAYGMP-ADEVEKLFEPQTPLE 226
                   VR  +  +G  G+RVN +S    A P+ T  A G+    ++    E  TP+ 
Sbjct: 165 AKASLEANVRYMANAMGPEGVRVNAIS----AGPIRTLAASGIKDFRKMLAHCEAVTPIR 220

Query: 227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             V     V ++  FL    S  ++G  + VDGGF
Sbjct: 221 RTV-TIEDVGNSAAFLCSDLSAGISGEVVHVDGGF 254

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* Length = 287

 Score = 57.2 bits (138), Expect = 8e-10
 Identities = 17/145 (11%), Positives = 40/145 (27%), Gaps = 13/145 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           ++GK A++  G   +G  +A L A  GA +++     D+      +     K +    + 
Sbjct: 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAET 176

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSN--AGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            ++      V            +F+    G+         +            +      
Sbjct: 177 ADDASRAEAV-------KGAHFVFTAGAIGLELLPQAAWQN----ESSIEIVADYNAQPP 225

Query: 131 CVKHAARVMVEGGVRGSIVCTASVA 155
                     +G   G      ++ 
Sbjct: 226 LGIGGIDATDKGKEYGGKRAFGALG 250

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* Length = 297

 Score = 51.2 bits (123), Expect = 8e-08
 Identities = 55/291 (18%), Positives = 100/291 (34%), Gaps = 53/291 (18%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIV-------------IADIQDELGRQVA 57
           L GK A I G A   G G   A+  A  GA ++V             +   + +  R + 
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 58  TSIG------------VGKCHYVHCDV--------TNECQVKALVDSTVQNYGQLDIMFS 97
                                 V  DV        ++   V+   +   Q++G +DI+  
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 98  NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS 157
           +        + +L+     +    + +     + + H   +M  GG   + + + +   S
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGG---ASI-SLTYIAS 181

Query: 158 CGGKRRTDYHMS----KHAVIGLVRSASVQLG-VHGIRVNCVSPHGLATPL-TCHAYGMP 211
              +    Y       K A+    R  + + G    IRVN +S    A PL +  A  + 
Sbjct: 182 --ERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTIS----AGPLGSRAAKAIG 235

Query: 212 -ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             D + +      P++  +  A  V +A  FL    +  +TG  + VD G 
Sbjct: 236 FIDTMIEYSYNNAPIQKTL-TADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* Length = 315

 Score = 51.3 bits (123), Expect = 9e-08
 Identities = 61/300 (20%), Positives = 106/300 (35%), Gaps = 65/300 (21%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIV------------------IADIQDEL 52
           L G+ A + G A   G G   A+  A  GAR+ +                  + + +   
Sbjct: 7   LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLP 66

Query: 53  GRQVATSIGVGKC-------HYVHCDVTNECQ--------VKALVDSTVQNYGQLDIM-- 95
              +    GV            V  D+ +  +        +K +     Q+ G +DI+  
Sbjct: 67  DGSLIEFAGVYPLDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVH 126

Query: 96  -FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV 154
             +N   ++     +L+     +    + +     + ++H   +M EGG   S V T S 
Sbjct: 127 SLANGPEVTKP---LLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGG---SAV-TLSY 179

Query: 155 AGSCGGKRRTDYH--MS--KHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPL-TCHAY 208
             +   +    Y   MS  K A+    R+ + + G  +G+RVN +S    A PL +  A 
Sbjct: 180 LAA--ERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAIS----AGPLKSRAAS 233

Query: 209 GMPADEVEKLF-------EPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
            +     +              PL   +  +  V  A LFL    +  V+G  L VD G 
Sbjct: 234 AIGKSGEKSFIDYAIDYSYNNAPLRRDL-HSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} Length = 319

 Score = 47.9 bits (114), Expect = 1e-06
 Identities = 61/312 (19%), Positives = 104/312 (33%), Gaps = 76/312 (24%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIV-------------------------- 44
           L GK A + G A   G G    +L    GAR++V                          
Sbjct: 7   LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYA 66

Query: 45  -----------IADIQDELGRQV---ATSIGVGKCHYVHCDVTNECQ--------VKALV 82
                           D +  ++          +   V  +V++  +        +  + 
Sbjct: 67  QEPSSKVAAEAAEKPVDLVFDKIYPLDAVFDTPQD--VPPEVSSNKRYAGVGGFTISEVA 124

Query: 83  DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG 142
           ++   + GQ+DI+  +        + +L      +    + +     + ++H   +M EG
Sbjct: 125 EAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEG 184

Query: 143 GVRGSIVCTASVAGSCGGKRRTDY--HMS--KHAVIGLVRSASVQLGV-HGIRVNCVSPH 197
           G   S +   S   S   K    Y   MS  K A+    R+ + + G    +RVNC+S  
Sbjct: 185 G---SAL-ALSYIAS--EKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCIS-- 236

Query: 198 GLATPL-TCHAYGMPADEVEKLF-------EPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
             A PL +  A  +     +          E   PL+  +  +  V  A LFL    +  
Sbjct: 237 --AGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKEL-ESDDVGRAALFLLSPLARA 293

Query: 250 VTGHDLVVDGGF 261
           VTG  L VD G 
Sbjct: 294 VTGATLYVDNGL 305

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 43.7 bits (103), Expect = 4e-05
 Identities = 26/155 (16%), Positives = 53/155 (34%), Gaps = 15/155 (9%)

Query: 19   IITGGASGIGETTARLFADHGARMIVI-------ADIQDELGRQVATSIGVGKCHYVHCD 71
            +ITGG  G G   A+     GA+ +V+          Q    R+     GV +      +
Sbjct: 1888 VITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ-GV-QVLVSTSN 1945

Query: 72   VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
             ++    ++L+       G +  +F+ A +L   D  + +     F  +      G    
Sbjct: 1946 ASSLDGARSLITE-ATQLGPVGGVFNLAMVL--RDAVLENQTPEFFQDVSKPKYSG--TA 2000

Query: 132  VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY 166
                        +   ++  +SV+   G   + +Y
Sbjct: 2001 NLDRVTREACPELDYFVIF-SSVSCGRGNAGQANY 2034

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* Length = 486

 Score = 41.6 bits (98), Expect = 1e-04
 Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 12/115 (10%)

Query: 20  ITGGASGIGETTARLFADHGARMIVI-------ADIQDELGRQVATSIGVGKCHYVHCDV 72
           +TGG  G+G   AR  A  GA  +++       AD   EL  ++    G  +     CDV
Sbjct: 231 VTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL-GA-RTTVAACDV 288

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           T+   V+ L+   + +   L  +F  A  L   D TV  L     +R     V G
Sbjct: 289 TDRESVRELLGG-IGDDVPLSAVFHAAATL--DDGTVDTLTGERIERASRAKVLG 340

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 41.6 bits (98), Expect = 2e-04
 Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 11/116 (9%)

Query: 19  IITGGASGIGETTAR-LFADHGARMIVI----ADIQDELGRQVA--TSIGVGKCHYVHCD 71
           ++TGG   +G   AR L  + G R +V+              VA  T+ G  +     CD
Sbjct: 534 LVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGA-EVSLQACD 592

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           V +   +  ++ S + +   L  +   AG+L   D     L     D++    V G
Sbjct: 593 VADRETLAKVLAS-IPDEHPLTAVVHAAGVL--DDGVSESLTVERLDQVLRPKVDG 645

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* Length = 496

 Score = 40.9 bits (96), Expect = 3e-04
 Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 11/115 (9%)

Query: 20  ITGGASGIGETTARLFADHGARMIVI-------ADIQDELGRQVATSIGVGKCHYVHCDV 72
           +TGG  GIG   AR  A+ GA  +V+       A    EL  ++    GV +     CD 
Sbjct: 244 VTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL-GV-RVTIAACDA 301

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
            +   + AL+   +     L  +F +AG+    D  V DL     D L    +  
Sbjct: 302 ADREALAALLAE-LPEDAPLTAVFHSAGVA-HDDAPVADLTLGQLDALMRAKLTA 354

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	264
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	100.0
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	100.0
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	100.0
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	100.0
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	100.0
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	100.0
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	100.0
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	100.0
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	100.0
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	100.0
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	100.0
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	100.0
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	100.0
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	100.0
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	100.0
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	100.0
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	100.0
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	100.0
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	100.0
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	100.0
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	100.0
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	100.0
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	100.0
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	100.0
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	100.0
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	100.0
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	100.0
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	100.0
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	100.0
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	100.0
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	100.0
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	100.0
3cxt_A	291	Dehydrogenase with different specificities; rossma	100.0
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	100.0
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	100.0
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	100.0
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	100.0
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	100.0
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	100.0
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	100.0
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	100.0
1xhl_A	297	Short-chain dehydrogenase/reductase family member	100.0
1xkq_A	280	Short-chain reductase family member (5D234); parra	100.0
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	100.0
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	100.0
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	100.0
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	100.0
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	100.0
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	100.0
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	100.0
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	100.0
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	100.0
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	100.0
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	100.0
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	100.0
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	100.0
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	100.0
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	100.0
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	100.0
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	100.0
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	100.0
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	100.0
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	100.0
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	100.0
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	100.0
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	100.0
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	100.0
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	100.0
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	100.0
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	100.0
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	100.0
4e4y_A	244	Short chain dehydrogenase family protein; structur	100.0
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	100.0
1spx_A	278	Short-chain reductase family member (5L265); paral	100.0
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	100.0
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	100.0
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	100.0
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	100.0
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	100.0
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	100.0
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	100.0
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	100.0
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	100.0
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	100.0
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	100.0
1xq1_A	266	Putative tropinone reducatse; structural genomics,	100.0
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	100.0
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	100.0
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	100.0
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	100.0
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	100.0
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	100.0
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	100.0
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	100.0
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	100.0
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	100.0
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	100.0
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	100.0
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	100.0
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	100.0
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	100.0
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	100.0
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	100.0
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	100.0
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	100.0
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	100.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	100.0
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	100.0
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	100.0
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	100.0
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	100.0
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	100.0
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	100.0
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	100.0
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	100.0
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	100.0
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	100.0
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	100.0
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	100.0
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	100.0
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	100.0
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	100.0
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	100.0
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	100.0
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	100.0
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	100.0
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	100.0
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	100.0
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	100.0
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	100.0
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	100.0
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	100.0
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	100.0
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	100.0
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	100.0
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	100.0
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	100.0
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	100.0
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	100.0
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	100.0
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	100.0
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	100.0
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	100.0
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	100.0
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	100.0
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	100.0
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	100.0
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	100.0
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	100.0
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	100.0
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	100.0
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	100.0
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	100.0
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	100.0
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.97
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.97
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.96
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.96
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.95
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.95
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.95
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.94
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.94
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.94
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.94
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.94
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.94
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.93
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.93
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.93
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.93
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.93
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.93
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.93
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.92
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.92
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.92
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.92
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.92
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.92
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.92
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.91
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.91
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.91
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.91
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.91
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.91
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.91
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.91
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.9
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.9
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.9
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.9
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.9
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.9
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.9
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.9
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.9
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.9
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.89
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.89
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.89
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.89
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.89
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.89
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.89
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.89
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.89
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.89
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.88
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.88
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.88
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.88
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.88
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.87
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.87
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.87
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.87
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.86
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.86
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.85
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.85
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.85
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.85
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.84
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.84
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.84
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.84
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	99.84
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.83
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.83
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.82
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.82
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.82
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.81
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.79
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	99.79
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	99.79
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	99.76
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	99.76
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	99.75
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	99.75
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	99.72
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	99.72
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	99.71
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	99.71
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	99.67
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	99.66
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	99.5
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	99.34
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	99.21
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	99.12
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	99.0
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.81
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.71
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	98.55
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	98.54
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	98.46
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.45
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	98.44
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	98.44
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	98.39
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	98.38
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	98.36
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	98.34
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	98.26
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	98.24
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	98.22
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	98.16
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	98.15
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	98.12
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	98.1
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	98.09
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	98.08
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	98.08
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	98.08
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	98.07
1id1_A	153	Putative potassium channel protein; RCK domain, E.	98.06
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	98.04
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	98.02
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	98.01
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	97.91
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	97.89
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	97.8
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	97.8
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	97.8
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.79
1smk_A	326	Malate dehydrogenase, glyoxysomal; tricarboxylic c	97.79
3gms_A	340	Putative NADPH:quinone reductase; structural genom	97.75
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	97.75
1p9o_A	313	Phosphopantothenoylcysteine synthetase; ligase; 2.	97.73
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	97.72
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	97.71
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	97.69
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	97.67
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	97.65
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	97.63
4eye_A	342	Probable oxidoreductase; structural genomics, niai	97.62
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	97.61
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	97.61
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	97.5
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	97.49
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	97.49
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.49
1hye_A	313	L-lactate/malate dehydrogenase; nucleotide binding	97.49
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.48
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	97.45
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.44
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	97.42
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	97.39
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	97.35
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.29
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	97.27
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.27
4e12_A	283	Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1	97.27
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	97.25
1o6z_A	303	MDH, malate dehydrogenase; halophilic, ION-binding	97.21
3c85_A	183	Putative glutathione-regulated potassium-efflux S	97.21
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	97.2
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	97.18
1mld_A	314	Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D	97.08
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.99
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.98
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.98
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	96.97
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	96.95
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	96.93
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.9
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	96.86
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	96.84
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	96.82
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	96.8
5mdh_A	333	Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH	96.77
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	96.75
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.67
3vku_A	326	L-LDH, L-lactate dehydrogenase; rossmann fold, NAD	96.66
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	96.63
3h8v_A	292	Ubiquitin-like modifier-activating enzyme 5; rossm	96.62
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	96.6
3pqe_A	326	L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas	96.58
3fi9_A	343	Malate dehydrogenase; structural genomics, oxidore	96.57
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	96.57
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	96.57
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	96.55
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	96.53
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	96.52
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	96.5
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	96.5
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	96.48
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	96.48
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	96.46
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	96.41
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	96.41
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	96.41
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	96.38
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	96.38
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.37
1p9l_A	245	Dihydrodipicolinate reductase; oxidoreductase, lys	96.31
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	96.26
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	96.25
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	96.24
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	96.23
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	96.16
3tl2_A	315	Malate dehydrogenase; center for structural genomi	96.15
1dih_A	273	Dihydrodipicolinate reductase; oxidoreductase; HET	96.11
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.09
3orq_A	377	N5-carboxyaminoimidazole ribonucleotide synthetas;	96.07
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	96.05
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	96.04
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	96.01
3c24_A	286	Putative oxidoreductase; YP_511008.1, structural g	95.97
4f3y_A	272	DHPR, dihydrodipicolinate reductase; structural ge	95.93
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	95.9
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	95.87
1oju_A	294	MDH, malate dehydrogenase; hyperthermophilic, oxid	95.85
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	95.81
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	95.78
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	95.76
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	95.7
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	95.69
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	95.69
3l07_A	285	Bifunctional protein fold; structural genomics, ID	95.67
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	95.64
1jay_A	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma	95.62
2pv7_A	298	T-protein [includes: chorismate mutase (EC 5.4.99	95.5
2raf_A	209	Putative dinucleotide-binding oxidoreductase; NP_7	95.49
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	95.48
4e4t_A	419	Phosphoribosylaminoimidazole carboxylase, ATPase;	95.45
3p7m_A	321	Malate dehydrogenase; putative dehydrogenase, enzy	95.41
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	95.39
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	95.39
4h7p_A	345	Malate dehydrogenase; ssgcid, structural G seattle	95.38
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	95.32
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	95.31
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	95.31
3hhp_A	312	Malate dehydrogenase; MDH, citric acid cycle, TCA	95.25
3h5n_A	353	MCCB protein; ubiquitin-activating enzyme, microci	95.24
3lk7_A	451	UDP-N-acetylmuramoylalanine--D-glutamate ligase; a	95.15
1lnq_A	336	MTHK channels, potassium channel related protein;	95.15
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	95.02
3d0o_A	317	L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly	95.02
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	95.0
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	94.99
1ez4_A	318	Lactate dehydrogenase; rossmann fold, oxidoreducta	94.96
3gvi_A	324	Malate dehydrogenase; NAD, oxidoreductase, tricarb	94.92
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	94.92
4aj2_A	331	L-lactate dehydrogenase A chain; oxidoreductase-in	94.91
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	94.9
3q2o_A	389	Phosphoribosylaminoimidazole carboxylase, ATPase;	94.86
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	94.82
1pzg_A	331	LDH, lactate dehydrogenase; apicomplexa, APAD, tet	94.8
2zqz_A	326	L-LDH, L-lactate dehydrogenase; oxidoreductase, ro	94.79
3s2u_A	365	UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape	94.79
4dgs_A	340	Dehydrogenase; structural genomics, PSI-biology, N	94.75
3rui_A	340	Ubiquitin-like modifier-activating enzyme ATG7; au	94.72
2dwc_A	433	PH0318, 433AA long hypothetical phosphoribosylglyc	94.67
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	94.66
2xxj_A	310	L-LDH, L-lactate dehydrogenase; oxidoreductase, hy	94.6
3ldh_A	330	Lactate dehydrogenase; oxidoreductase, CHOH donor,	94.59
3d1l_A	266	Putative NADP oxidoreductase BF3122; structural ge	94.59
3nep_X	314	Malate dehydrogenase; halophIle, molecular adpatat	94.58
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	94.58
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	94.49
1kjq_A	391	GART 2, phosphoribosylglycinamide formyltransferas	94.46
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	94.45
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	94.4
1ur5_A	309	Malate dehydrogenase; oxidoreductase, tricarboxyli	94.37
2v6b_A	304	L-LDH, L-lactate dehydrogenase; oxidoreductase, ra	94.34
3ijp_A	288	DHPR, dihydrodipicolinate reductase; ssgcid, SBRI,	94.32
2ewd_A	317	Lactate dehydrogenase,; protein-substrate_cofactor	94.32
3qha_A	296	Putative oxidoreductase; seattle structural genomi	94.23
4gsl_A	615	Ubiquitin-like modifier-activating enzyme ATG7; ub	94.05
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	94.04
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	94.03

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=1.7e-61  Score=395.57  Aligned_cols=250  Identities=29%  Similarity=0.476  Sum_probs=220.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++|+||++|||||++|||+++|++|+++|++|+++.|+.++..+..++... ..++.++++|++|+++++++++++.++|
T Consensus         3 ~sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~   82 (254)
T 4fn4_A            3 QSLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY   82 (254)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            479999999999999999999999999999988888876655444433322 3579999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      |+||+||||||+.... .++.+.+.++|++++++|+.++|+++|+++|+|++++ .|+||++||..+..+.++...|++|
T Consensus        83 G~iDiLVNNAGi~~~~-~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~~g~~~~~~~~~Y~as  160 (254)
T 4fn4_A           83 SRIDVLCNNAGIMDGV-TPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQG-KGVIVNTASIAGIRGGFAGAPYTVA  160 (254)
T ss_dssp             SCCCEEEECCCCCCTT-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCSSSSCHHHHHH
T ss_pred             CCCCEEEECCcccCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhcCCCCCChHHHHH
Confidence            9999999999986542 3799999999999999999999999999999999988 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+.+|+|++|.|++++|||||+|+||+++|+|....................|. +|+.+|||||++++||+|++++|
T Consensus       161 Kaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~-~R~g~pediA~~v~fLaSd~a~~  239 (254)
T 4fn4_A          161 KHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLS-SRLAEPEDIANVIVFLASDEASF  239 (254)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTC-CCCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999997665443333333333333445 89999999999999999999999


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      +|||+|.+|||++|
T Consensus       240 iTG~~i~VDGG~t~  253 (254)
T 4fn4_A          240 VNGDAVVVDGGLTV  253 (254)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CcCCEEEeCCCccc
Confidence            99999999999986

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=2e-61  Score=395.25  Aligned_cols=249  Identities=24%  Similarity=0.341  Sum_probs=223.6

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+|+|+||++|||||++|||+++|++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+
T Consensus         3 ~~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (255)
T 4g81_D            3 ALFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA   82 (255)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence            36899999999999999999999999999999988888876665554444333 35789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +||+||+||||||+....  ++.+.++++|++++++|+.++|+++|.++|+|.++...|+||++||..+..+.+....|+
T Consensus        83 ~~G~iDiLVNNAG~~~~~--~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~  160 (255)
T 4g81_D           83 EGIHVDILINNAGIQYRK--PMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYT  160 (255)
T ss_dssp             TTCCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HCCCCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHH
Confidence            999999999999997655  899999999999999999999999999999997654379999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+.+|+|++|.|++++|||||+|+||+++|+|......  .++..+.+....|. +|+.+|||||++++||+|+.+
T Consensus       161 asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~--~~~~~~~~~~~~Pl-~R~g~pediA~~v~fL~S~~a  237 (255)
T 4g81_D          161 AAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIE--DKQFDSWVKSSTPS-QRWGRPEELIGTAIFLSSKAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHT--CHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccC--CHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999876532  24445556667788 899999999999999999999


Q ss_pred             CCeeccEEEecCeee
Q 041914          248 EFVTGHDLVVDGGFL  262 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~  262 (264)
                      +|+|||+|.+||||+
T Consensus       238 ~~iTG~~i~VDGG~~  252 (255)
T 4g81_D          238 DYINGQIIYVDGGWL  252 (255)
T ss_dssp             TTCCSCEEEESTTGG
T ss_pred             CCCcCCEEEECCCeE
Confidence            999999999999985

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=9.7e-60  Score=381.91  Aligned_cols=245  Identities=25%  Similarity=0.386  Sum_probs=215.0

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..|+|+||++|||||++|||+++|++|+++|++|++..|+..+......+. ...++.++++|++|+++++++++     
T Consensus         3 n~f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~-~g~~~~~~~~Dv~d~~~v~~~~~-----   76 (247)
T 4hp8_A            3 NPFSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAK-DGGNASALLIDFADPLAAKDSFT-----   76 (247)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH-TTCCEEEEECCTTSTTTTTTSST-----
T ss_pred             CCcCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHH-hCCcEEEEEccCCCHHHHHHHHH-----
Confidence            357899999999999999999999999999999988888764322211111 23478999999999988877663     


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.++++|++++++|+.++|+++|+++|+|.+++..|+||++||..+..+.++...|++
T Consensus        77 ~g~iDiLVNNAGi~~~~--~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~a  154 (247)
T 4hp8_A           77 DAGFDILVNNAGIIRRA--DSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTA  154 (247)
T ss_dssp             TTCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHH
T ss_pred             hCCCCEEEECCCCCCCC--CcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHH
Confidence            57999999999997665  8999999999999999999999999999999987654799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ||+|+.+|+|++|.||+++|||||+|+||+++|+|......  .++..+.+....|. +|+.+|||||++++||+|++++
T Consensus       155 sKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~--~~~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd~a~  231 (247)
T 4hp8_A          155 AKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRA--DAARNKAILERIPA-GRWGHSEDIAGAAVFLSSAAAD  231 (247)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--SHHHHHHHHTTCTT-SSCBCTHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhccc--CHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999875532  23444556677888 8999999999999999999999


Q ss_pred             CeeccEEEecCeeecC
Q 041914          249 FVTGHDLVVDGGFLIR  264 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~~  264 (264)
                      |+|||+|.+||||+.|
T Consensus       232 ~iTG~~i~VDGG~~Ar  247 (247)
T 4hp8_A          232 YVHGAILNVDGGWLAR  247 (247)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             CCcCCeEEECcccccC
Confidence            9999999999999875

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=2.6e-59  Score=386.12  Aligned_cols=245  Identities=34%  Similarity=0.479  Sum_probs=213.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+|+||++|||||++|||+++|++|+++|++|+++.|+.+.+.+...+ +. +++..+++|++|+++++++++++.++||
T Consensus        25 ~rL~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~-~g-~~~~~~~~Dv~~~~~v~~~~~~~~~~~G  102 (273)
T 4fgs_A           25 QRLNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAE-IG-GGAVGIQADSANLAELDRLYEKVKAEAG  102 (273)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HC-TTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             chhCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-cC-CCeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            469999999999999999999999999999988888887766554443 33 4678899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      +||+||||||+....  ++.+.+.++|++++++|+.++|+++|+++|+|++   .|+||+++|..+..+.|....|++||
T Consensus       103 ~iDiLVNNAG~~~~~--~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~---~G~IInisS~~~~~~~~~~~~Y~asK  177 (273)
T 4fgs_A          103 RIDVLFVNAGGGSML--PLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLAR---GSSVVLTGSTAGSTGTPAFSVYAASK  177 (273)
T ss_dssp             CEEEEEECCCCCCCC--CTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGGSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--ChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCeEEEEeehhhccCCCCchHHHHHH
Confidence            999999999987654  8999999999999999999999999999999976   57999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh---HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA---DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +|+.+|+|++|.||+++|||||+|+||+++|++.........   ++..+.+....|. +|+.+|||||++++||+|+++
T Consensus       178 aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeiA~~v~FLaSd~a  256 (273)
T 4fgs_A          178 AALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPM-GRVGRAEEVAAAALFLASDDS  256 (273)
T ss_dssp             HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999876654432   2333445566788 899999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      +|+|||+|.+|||++.
T Consensus       257 ~~iTG~~i~VDGG~s~  272 (273)
T 4fgs_A          257 SFVTGAELFVDGGSAQ  272 (273)
T ss_dssp             TTCCSCEEEESTTTTT
T ss_pred             cCccCCeEeECcChhh
Confidence            9999999999999864

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=8.3e-59  Score=381.28  Aligned_cols=248  Identities=28%  Similarity=0.370  Sum_probs=214.4

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      |.++|+||++|||||++|||+++|++|+++|++|+++.|+.++.. ...+.. ...++.++++|++|+++++++++++.+
T Consensus         1 M~~~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~   79 (258)
T 4gkb_A            1 MDLNLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGA-FLDALAQRQPRATYLPVELQDDAQCRDAVAQTIA   79 (258)
T ss_dssp             CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHH-HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHH-HHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHH
Confidence            457899999999999999999999999999999999988876542 222222 235788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +||++|+||||||+...   ...+.+.++|++.+++|+.++|+++|+++|+|+++  +|+||++||..+..+.++...|+
T Consensus        80 ~~G~iDiLVNnAGi~~~---~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~  154 (258)
T 4gkb_A           80 TFGRLDGLVNNAGVNDG---IGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKAT--RGAIVNISSKTAVTGQGNTSGYC  154 (258)
T ss_dssp             HHSCCCEEEECCCCCCC---CCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCTHHHHCCSSCHHHH
T ss_pred             HhCCCCEEEECCCCCCC---CCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc--CCeEEEEeehhhccCCCCchHHH
Confidence            99999999999998643   34578999999999999999999999999999765  48999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +||+|+.+|+|++|.|++++|||||+|+||+++|+|........  .++..+.+....|+.+|+.+|||||++++||+|+
T Consensus       155 asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~peeiA~~v~fLaS~  234 (258)
T 4gkb_A          155 ASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDEIADTAVFLLSP  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999987654321  2334445566778856999999999999999999


Q ss_pred             CCCCeeccEEEecCeee
Q 041914          246 DSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~  262 (264)
                      .++|+|||+|.+|||++
T Consensus       235 ~a~~iTG~~i~VDGG~T  251 (258)
T 4gkb_A          235 RASHTTGEWLFVDGGYT  251 (258)
T ss_dssp             GGTTCCSCEEEESTTTT
T ss_pred             hhcCccCCeEEECCCcc
Confidence            99999999999999985

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=7.8e-58  Score=376.61  Aligned_cols=246  Identities=24%  Similarity=0.298  Sum_probs=216.1

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      |....++|+||++|||||++|||+++|++|+++|++|+++.|+..+..         .+..++++|++++++++++++++
T Consensus         2 Mm~dl~~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~   72 (261)
T 4h15_A            2 MMIEFLNLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGL---------PEELFVEADLTTKEGCAIVAEAT   72 (261)
T ss_dssp             CCCCCCCCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTS---------CTTTEEECCTTSHHHHHHHHHHH
T ss_pred             cchhccCCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCC---------CcEEEEEcCCCCHHHHHHHHHHH
Confidence            444556899999999999999999999999999999998888754321         12347899999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC-CCc
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RRT  164 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~-~~~  164 (264)
                      .++||++|+||||||+......++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.| +..
T Consensus        73 ~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Iv~isS~~~~~~~~~~~~  151 (261)
T 4h15_A           73 RQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARG-SGVVVHVTSIQRVLPLPESTT  151 (261)
T ss_dssp             HHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTTCH
T ss_pred             HHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcC-CceEEEEEehhhccCCCCccH
Confidence            9999999999999998766555899999999999999999999999999999999888 89999999999998876 578


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCCh---HHHHhhcCCCCCCCCCCCChHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPA---DEVEKLFEPQTPLEGVVLRAGH  234 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~---~~~~~~~~~~~~~~~~~~~~ed  234 (264)
                      .|++||+|+.+|+|+++.|++++|||||+|+||+++|++.....       ....   ++.........|. +|+.+|||
T Consensus       152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~pee  230 (261)
T 4h15_A          152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPL-GRPAKPEE  230 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTT-SSCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCC-CCCcCHHH
Confidence            89999999999999999999999999999999999999865432       1111   2233344567788 89999999


Q ss_pred             HHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          235 VADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       235 va~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ||++++||+|++++|+|||+|.+|||++
T Consensus       231 vA~~v~fLaS~~a~~itG~~i~VDGG~v  258 (261)
T 4h15_A          231 VANLIAFLASDRAASITGAEYTIDGGTV  258 (261)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCS
T ss_pred             HHHHHHHHhCchhcCccCcEEEECCcCc
Confidence            9999999999999999999999999985

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=3.8e-57  Score=365.98  Aligned_cols=233  Identities=30%  Similarity=0.453  Sum_probs=204.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      |+||++|||||++|||+++|++|+++|++|+++.|+.+...+     ....++..+++|++|+++++++++    ++|++
T Consensus         9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-----~~~~~~~~~~~Dv~~~~~v~~~~~----~~g~i   79 (242)
T 4b79_A            9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-----PRHPRIRREELDITDSQRLQRLFE----ALPRL   79 (242)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-----CCCTTEEEEECCTTCHHHHHHHHH----HCSCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-----hhcCCeEEEEecCCCHHHHHHHHH----hcCCC
Confidence            589999999999999999999999999999888887665422     123478999999999999887765    57999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||||+..    ++.+.+.++|++++++|+.++|+++|+++|+|+++  .|+||++||..+..+.++...|++||+|
T Consensus        80 DiLVNNAGi~~----~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~--~G~IVnisS~~~~~~~~~~~~Y~asKaa  153 (242)
T 4b79_A           80 DVLVNNAGISR----DREEYDLATFERVLRLNLSAAMLASQLARPLLAQR--GGSILNIASMYSTFGSADRPAYSASKGA  153 (242)
T ss_dssp             SEEEECCCCCC----GGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--CEEEEEECCGGGTSCCSSCHHHHHHHHH
T ss_pred             CEEEECCCCCC----CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCeEEEEeeccccCCCCCCHHHHHHHHH
Confidence            99999999853    67789999999999999999999999999999875  4999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      +.+|+|++|.||+++|||||+|+||+++|||......  .++..+.+....|. +|+.+|||||++++||+|++++|+||
T Consensus       154 v~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~--~~~~~~~~~~~~Pl-gR~g~peeiA~~v~fLaSd~a~~iTG  230 (242)
T 4b79_A          154 IVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKA--DVEATRRIMQRTPL-ARWGEAPEVASAAAFLCGPGASFVTG  230 (242)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CC--CHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccC--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCccC
Confidence            9999999999999999999999999999999875532  23444555667888 89999999999999999999999999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      |+|.+||||+.
T Consensus       231 ~~l~VDGG~la  241 (242)
T 4b79_A          231 AVLAVDGGYLC  241 (242)
T ss_dssp             CEEEESTTGGG
T ss_pred             ceEEECccHhh
Confidence            99999999975

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=5.3e-56  Score=361.58  Aligned_cols=230  Identities=23%  Similarity=0.392  Sum_probs=203.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||++|||+++|++|+++|++|+++.++++.. +++.++  ..++.++++|++|+++++++++++.++||+||+|
T Consensus         3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-~~~~~~--~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiL   79 (247)
T 3ged_A            3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS-ADFAKE--RPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVL   79 (247)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHTT--CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHh--cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            8999999999999999999999999988888775544 333332  2468899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||||+....  ++.+.+.++|++++++|+.++|+++|.++|+|.++  +|+||++||..+..+.+....|++||+|+.+
T Consensus        80 VNNAG~~~~~--~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~--~G~IInisS~~~~~~~~~~~~Y~asKaal~~  155 (247)
T 3ged_A           80 VNNACRGSKG--ILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKN--KGRIINIASTRAFQSEPDSEAYASAKGGIVA  155 (247)
T ss_dssp             EECCCCCCCC--GGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT--TCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc--CCcEEEEeecccccCCCCCHHHHHHHHHHHH
Confidence            9999987665  89999999999999999999999999999999875  4899999999999999999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEE
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL  255 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i  255 (264)
                      |+|++|.|+++ |||||+|+||+++|++..+..    ++    .....|. +|+.+|||||++++||+|  ++|+|||+|
T Consensus       156 ltk~lA~ela~-~IrVN~I~PG~i~t~~~~~~~----~~----~~~~~Pl-~R~g~pediA~~v~fL~s--~~~iTG~~i  223 (247)
T 3ged_A          156 LTHALAMSLGP-DVLVNCIAPGWINVTEQQEFT----QE----DCAAIPA-GKVGTPKDISNMVLFLCQ--QDFITGETI  223 (247)
T ss_dssp             HHHHHHHHHTT-TSEEEEEEECSBCCCC---CC----HH----HHHTSTT-SSCBCHHHHHHHHHHHHH--CSSCCSCEE
T ss_pred             HHHHHHHHHCC-CCEEEEEecCcCCCCCcHHHH----HH----HHhcCCC-CCCcCHHHHHHHHHHHHh--CCCCCCCeE
Confidence            99999999997 999999999999999875431    12    2234677 899999999999999997  469999999


Q ss_pred             EecCeeecC
Q 041914          256 VVDGGFLIR  264 (264)
Q Consensus       256 ~~dgG~~~~  264 (264)
                      .+|||++.|
T Consensus       224 ~VDGG~s~r  232 (247)
T 3ged_A          224 IVDGGMSKR  232 (247)
T ss_dssp             EESTTGGGC
T ss_pred             EECcCHHHh
Confidence            999999875

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=2.6e-55  Score=362.17  Aligned_cols=248  Identities=20%  Similarity=0.229  Sum_probs=217.7

Q ss_pred             cccCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh--hCCCcEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATS--IGVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      |++|+||++|||||+|  |||+++|++|+++|++|++++|+++...+..+..  ....++.++++|++|+++++++++++
T Consensus         1 M~~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   80 (256)
T 4fs3_A            1 MLNLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQI   80 (256)
T ss_dssp             CCCCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHH
Confidence            6789999999999875  9999999999999999988888766553332222  23347899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      .+++|++|+||||||+....  ..++.+.++++|...+++|+.+++.+++.++|++++   .|+||++||..+..+.+++
T Consensus        81 ~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~IVnisS~~~~~~~~~~  157 (256)
T 4fs3_A           81 GKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPE---GGSIVATTYLGGEFAVQNY  157 (256)
T ss_dssp             HHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTT---CEEEEEEECGGGTSCCTTT
T ss_pred             HHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhcc---CCEEEEEeccccccCcccc
Confidence            99999999999999986532  236778999999999999999999999999887754   5899999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+|+.+|+|+++.|++++|||||+|+||+++|++.....  ..++..+.+....|. +|+.+|||||++++||+
T Consensus       158 ~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~--~~~~~~~~~~~~~Pl-~R~g~peevA~~v~fL~  234 (256)
T 4fs3_A          158 NVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVG--GFNTILKEIKERAPL-KRNVDQVEVGKTAAYLL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhcc--CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999986542  335555666667888 89999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |++++|+|||+|.+||||+.
T Consensus       235 Sd~a~~iTG~~i~VDGG~~a  254 (256)
T 4fs3_A          235 SDLSSGVTGENIHVDSGFHA  254 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCccCCEEEECcCHHh
Confidence            99999999999999999863

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=5.6e-52  Score=342.46  Aligned_cols=249  Identities=30%  Similarity=0.457  Sum_probs=220.5

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .+++++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   84 (256)
T 3gaf_A            5 ESPFHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAAL   84 (256)
T ss_dssp             -CTTCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             cCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence            346789999999999999999999999999999988888876655443333222 3578999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++|+||||||+....  ++ +.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|
T Consensus        85 ~~~g~id~lv~nAg~~~~~--~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  160 (256)
T 3gaf_A           85 DQFGKITVLVNNAGGGGPK--PF-DMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAG-GGAILNISSMAGENTNVRMASY  160 (256)
T ss_dssp             HHHSCCCEEEECCCCCCCC--CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTCCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCCC--CC-CCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHHHcCCCCCchHH
Confidence            9999999999999987654  56 899999999999999999999999999999877 7999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+++++|++.++.|++++||+||+|+||+++|++.....   .++..+.+....|. +++.+|||+|++++||+++.
T Consensus       161 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~p~-~r~~~~~dva~~~~~L~s~~  236 (256)
T 3gaf_A          161 GSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVL---TPEIERAMLKHTPL-GRLGEAQDIANAALFLCSPA  236 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHC---CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhcc---CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999999876542   23444555566777 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      .+++||++|.+|||+..+
T Consensus       237 ~~~itG~~i~vdgG~~~~  254 (256)
T 3gaf_A          237 AAWISGQVLTVSGGGVQE  254 (256)
T ss_dssp             GTTCCSCEEEESTTSCCC
T ss_pred             ccCccCCEEEECCCcccc
Confidence            999999999999998754

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9.5e-52  Score=342.20  Aligned_cols=247  Identities=28%  Similarity=0.495  Sum_probs=220.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +|+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+....  .++.++++|++|+++++++++++.
T Consensus         4 ~m~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   83 (262)
T 3pk0_A            4 SMFDLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAV   83 (262)
T ss_dssp             CTTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHH
Confidence            467899999999999999999999999999999988888876654444333322  478999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCch
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTD  165 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~  165 (264)
                      ++++++|+||||||+....  ++.+.+.++|++++++|+.++++++++++|+|++++ .++||++||..+. .+.++...
T Consensus        84 ~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~  160 (262)
T 3pk0_A           84 EEFGGIDVVCANAGVFPDA--PLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASG-SGRVVLTSSITGPITGYPGWSH  160 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHS-SCEEEEECCSBTTTBCCTTCHH
T ss_pred             HHhCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEechhhccCCCCCChh
Confidence            9999999999999987654  888999999999999999999999999999999877 7899999999986 78899999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+++++|++.++.|++++||+||+|+||++.|++....    .++....+....|. +++.+|||+|++++||+++
T Consensus       161 Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~  235 (262)
T 3pk0_A          161 YGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLEN----GEEYIASMARSIPA-GALGTPEDIGHLAAFLATK  235 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTT----CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCcccccc----CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999987532    23444555566777 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      +.+++||++|.+|||+.+
T Consensus       236 ~~~~itG~~i~vdGG~~~  253 (262)
T 3pk0_A          236 EAGYITGQAIAVDGGQVL  253 (262)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCCcCCEEEECCCeec
Confidence            999999999999999876

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=5.4e-52  Score=344.41  Aligned_cols=252  Identities=30%  Similarity=0.436  Sum_probs=222.7

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ..++++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..  ...++.++++|++|+++++++++++
T Consensus        13 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   92 (266)
T 4egf_A           13 AGVLRLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRA   92 (266)
T ss_dssp             CGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            34678999999999999999999999999999998888887766544333322  2357899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.++...
T Consensus        93 ~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~  170 (266)
T 4egf_A           93 AEAFGGLDVLVNNAGISHPQ--PVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYA  170 (266)
T ss_dssp             HHHHTSCSEEEEECCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHcCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChH
Confidence            99999999999999997654  8889999999999999999999999999999987654689999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+++|++.++.|++++||+||+|+||++.|++......  .+.....+....|. +++.+|||+|++++||+++
T Consensus       171 Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~  247 (266)
T 4egf_A          171 YCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWG--DEAKSAPMIARIPL-GRFAVPHEVSDAVVWLASD  247 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTC--SHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhcc--ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999998765532  23334445556777 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      ..+++||++|.+|||++++
T Consensus       248 ~~~~itG~~i~vdGG~~~~  266 (266)
T 4egf_A          248 AASMINGVDIPVDGGYTMG  266 (266)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             hhcCccCcEEEECCCccCC
Confidence            9999999999999999874

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=7.3e-52  Score=343.46  Aligned_cols=250  Identities=24%  Similarity=0.295  Sum_probs=217.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ++++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..   ...++.++++|++|+++++++++++.
T Consensus         3 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (265)
T 3lf2_A            3 PYDLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACE   82 (265)
T ss_dssp             CCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHH
Confidence            457899999999999999999999999999998888887665544333322   22358999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.++...|
T Consensus        83 ~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  159 (265)
T 3lf2_A           83 RTLGCASILVNNAGQGRVS--TFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRA-DAAIVCVNSLLASQPEPHMVAT  159 (265)
T ss_dssp             HHHCSCSEEEECCCCCCCB--CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-TEEEEEEEEGGGTSCCTTBHHH
T ss_pred             HHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CeEEEEECCcccCCCCCCchhh
Confidence            9999999999999987654  888999999999999999999999999999999877 7999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC------ChHHHHhhcC--CCCCCCCCCCChHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM------PADEVEKLFE--PQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~--~~~~~~~~~~~~edva~~  238 (264)
                      ++||+|+++|+++++.|++++||+||+|+||+++|++.......      ..+.......  ...|. +|+.+|||+|++
T Consensus       160 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~  238 (265)
T 3lf2_A          160 SAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL-GRLGKPIEAARA  238 (265)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT-CSCBCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc-CCCcCHHHHHHH
Confidence            99999999999999999999999999999999999987654321      1222222221  12566 899999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeec
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++||+++..+++||++|.+|||++.
T Consensus       239 v~fL~s~~~~~itG~~i~vdGG~~~  263 (265)
T 3lf2_A          239 ILFLASPLSAYTTGSHIDVSGGLSR  263 (265)
T ss_dssp             HHHHHSGGGTTCCSEEEEESSSCCC
T ss_pred             HHHHhCchhcCcCCCEEEECCCCcC
Confidence            9999999999999999999999975

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=9.2e-52  Score=339.65  Aligned_cols=244  Identities=29%  Similarity=0.477  Sum_probs=216.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++++|++|||||++|||++++++|+++|++|+++.|+.+...+ +.+... .+..++++|++|+++++++++++.+++
T Consensus         4 ~~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~   81 (248)
T 3op4_A            4 FMNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQA-ISDYLG-DNGKGMALNVTNPESIEAVLKAITDEF   81 (248)
T ss_dssp             TTCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHH-HHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhc-ccceEEEEeCCCHHHHHHHHHHHHHHc
Confidence            467899999999999999999999999999998888887665433 333333 257889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|.+++ .|+||++||..+..+.++...|++|
T Consensus        82 g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  158 (248)
T 3op4_A           82 GGVDILVNNAGITRDN--LLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKR-QGRIINVGSVVGTMGNAGQANYAAA  158 (248)
T ss_dssp             CCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHH
Confidence            9999999999987654  788999999999999999999999999999998877 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+++|++.++.|++++||+||+|+||+++|++....   . ++.........|. +++.+|||+|++++||++++..+
T Consensus       159 K~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~-~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~~~~~  233 (248)
T 3op4_A          159 KAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKAL---N-DEQRTATLAQVPA-GRLGDPREIASAVAFLASPEAAY  233 (248)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTS---C-HHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhc---C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccCC
Confidence            99999999999999999999999999999999987543   2 2333334445666 88999999999999999999999


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      +||++|.+|||+++
T Consensus       234 itG~~i~vdgG~~~  247 (248)
T 3op4_A          234 ITGETLHVNGGMYM  247 (248)
T ss_dssp             CCSCEEEESTTSSC
T ss_pred             ccCcEEEECCCeec
Confidence            99999999999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.4e-51  Score=342.67  Aligned_cols=252  Identities=34%  Similarity=0.504  Sum_probs=219.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |.+++||++|||||++|||+++|++|+++|++|+++.|+.+...+...+... ..++.++.+|++|+++++++++++.++
T Consensus         3 m~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (280)
T 3tox_A            3 MSRLEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRR   82 (280)
T ss_dssp             -CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988887776655443333322 247899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~  167 (264)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+. .+.++...|+
T Consensus        83 ~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~  160 (280)
T 3tox_A           83 FGGLDTAFNNAGALGAM-GEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALG-GGSLTFTSSFVGHTAGFAGVAPYA  160 (280)
T ss_dssp             HSCCCEEEECCCCCCSC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCSBTTTBCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEcChhhCcCCCCCchhHH
Confidence            99999999999987432 3788999999999999999999999999999999877 7999999999998 7888999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.........++....+....|. +++.+|||+|++++||+++..
T Consensus       161 asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~a  239 (280)
T 3tox_A          161 ASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHAL-KRIARPEEIAEAALYLASDGA  239 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCcc-CCCcCHHHHHHHHHHHhCccc
Confidence            9999999999999999999999999999999999987653322233444455556677 889999999999999999999


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      +++||++|.+|||++++
T Consensus       240 ~~itG~~i~vdGG~~~~  256 (280)
T 3tox_A          240 SFVTGAALLADGGASVT  256 (280)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCCcCcEEEECCCcccc
Confidence            99999999999999864

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=100.00  E-value=8.6e-51  Score=340.64  Aligned_cols=254  Identities=31%  Similarity=0.451  Sum_probs=214.4

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc---------------hhhHHHHHhhhC--CCcEEEEEe
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ---------------DELGRQVATSIG--VGKCHYVHC   70 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~---------------~~~~~~~~~~~~--~~~~~~~~~   70 (264)
                      +|+.+++||++|||||++|||++++++|+++|++|+++.|+.               .+..+...+...  ..++.++++
T Consensus         4 ~m~~~l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (286)
T 3uve_A            4 SMTGRVEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEV   83 (286)
T ss_dssp             --CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred             CCCcccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEc
Confidence            355679999999999999999999999999999988887762               222233333322  247899999


Q ss_pred             cCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEE
Q 041914           71 DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVC  150 (264)
Q Consensus        71 D~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~  150 (264)
                      |++|+++++++++++.++++++|+||||||+.... .++.+.+.++|++++++|+.+++++++.++|+|.+++..|+||+
T Consensus        84 Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~  162 (286)
T 3uve_A           84 DVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIIL  162 (286)
T ss_dssp             CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred             CCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEE
Confidence            99999999999999999999999999999987654 25888999999999999999999999999999987653689999


Q ss_pred             ecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----------CCChHHHHhh--
Q 041914          151 TASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----------GMPADEVEKL--  218 (264)
Q Consensus       151 iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~--  218 (264)
                      +||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.....          .....+....  
T Consensus       163 isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (286)
T 3uve_A          163 TSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQ  242 (286)
T ss_dssp             ECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH
T ss_pred             ECchhhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999875310          1111121221  


Q ss_pred             cCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          219 FEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       219 ~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +....|  +++.+|||+|++++||+++..+++||++|.+|||++++
T Consensus       243 ~~~~~p--~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  286 (286)
T 3uve_A          243 MFHTLP--IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCLK  286 (286)
T ss_dssp             TTCSSS--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             hhhccC--CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCccccc
Confidence            233344  78899999999999999999999999999999999886

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=3.9e-51  Score=343.38  Aligned_cols=249  Identities=27%  Similarity=0.443  Sum_probs=221.4

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ...++++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+....  .++.++++|++|++++++++++
T Consensus        33 ~~~m~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~  112 (293)
T 3rih_A           33 RKVMFDLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART  112 (293)
T ss_dssp             -CCTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence            34477899999999999999999999999999999999888877665444433322  4789999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRR  163 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~  163 (264)
                      +.++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+. .+.++.
T Consensus       113 ~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iV~isS~~~~~~~~~~~  189 (293)
T 3rih_A          113 VVDAFGALDVVCANAGIFPEA--RLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASG-RGRVILTSSITGPVTGYPGW  189 (293)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHS-SCEEEEECCSBTTTBBCTTC
T ss_pred             HHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEeChhhccCCCCCC
Confidence            999999999999999987654  788999999999999999999999999999999877 7899999999986 788899


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+++++|++.++.|++++||+||+|+||++.|++.....    ++..+.+....|. +++.+|+|+|++++||+
T Consensus       190 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~-~r~~~p~dvA~~v~fL~  264 (293)
T 3rih_A          190 SHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG----EEYISGMARSIPM-GMLGSPVDIGHLAAFLA  264 (293)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC----HHHHHHHHTTSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc----HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999875431    3444455566777 89999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++..+++||++|.+|||+.+
T Consensus       265 s~~a~~itG~~i~vdGG~~~  284 (293)
T 3rih_A          265 TDEAGYITGQAIVVDGGQVL  284 (293)
T ss_dssp             SGGGTTCCSCEEEESTTTTC
T ss_pred             CccccCCCCCEEEECCCccC
Confidence            99999999999999999876

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=2.8e-51  Score=338.90  Aligned_cols=251  Identities=31%  Similarity=0.453  Sum_probs=217.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ||.++++|++|||||++|||++++++|+++|++|+++.|+.++..+.. +... .++.++++|++|+++++++++++.++
T Consensus         2 mm~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~   79 (259)
T 4e6p_A            2 MMKRLEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAA-AEIG-PAAYAVQMDVTRQDSIDAAIAATVEH   79 (259)
T ss_dssp             --CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHC-TTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhC-CCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            456789999999999999999999999999999888888766554433 3332 36789999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..|+||++||..+..+.++...|++
T Consensus        80 ~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~a  157 (259)
T 4e6p_A           80 AGGLDILVNNAALFDLA--PIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCA  157 (259)
T ss_dssp             SSSCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             cCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHH
Confidence            99999999999987654  7889999999999999999999999999999987654689999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      ||+++++|++.++.|++++||+||+|+||+++|++.....       ....++....+....|. +++.+|||+|++++|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~  236 (259)
T 4e6p_A          158 TKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPF-GRMGTAEDLTGMAIF  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCTHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999865431       00112223333444566 899999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++..+++||++|.+|||+.++
T Consensus       237 L~s~~~~~itG~~i~vdgG~~~s  259 (259)
T 4e6p_A          237 LASAESDYIVSQTYNVDGGNWMS  259 (259)
T ss_dssp             TTSGGGTTCCSCEEEESTTSSCC
T ss_pred             HhCCccCCCCCCEEEECcChhcC
Confidence            99999999999999999999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=2.5e-51  Score=340.24  Aligned_cols=247  Identities=23%  Similarity=0.431  Sum_probs=208.4

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ..+|+++++|++|||||++|||+++|++|+++|++|+++.|+.++..+. .+... .++.++++|++|+++++++++++.
T Consensus        19 ~~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~   96 (266)
T 3grp_A           19 PGSMFKLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEI-AADLG-KDVFVFSANLSDRKSIKQLAEVAE   96 (266)
T ss_dssp             --CTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHC-SSEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CcchhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhC-CceEEEEeecCCHHHHHHHHHHHH
Confidence            3457789999999999999999999999999999988888876655443 33332 478999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.++...|
T Consensus        97 ~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~Iv~isS~~~~~~~~~~~~Y  173 (266)
T 3grp_A           97 REMEGIDILVNNAGITRDG--LFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRR-YGRIINITSIVGVVGNPGQTNY  173 (266)
T ss_dssp             HHHTSCCEEEECCCCC-------CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCC-------CHHHH
T ss_pred             HHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CcEEEEECCHHHcCCCCCchhH
Confidence            9999999999999987654  788899999999999999999999999999998877 7999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++....    .++..+.+....|. +++.+|||+|++++||+++.
T Consensus       174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~-~r~~~~edvA~~v~~L~s~~  248 (266)
T 3grp_A          174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKL----NEKQKEAIMAMIPM-KRMGIGEEIAFATVYLASDE  248 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTC----CHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhcc----CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999999999987643    23344445566777 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      .+++||++|.+|||+++
T Consensus       249 ~~~itG~~i~vdGG~~~  265 (266)
T 3grp_A          249 AAYLTGQTLHINGGMAM  265 (266)
T ss_dssp             GTTCCSCEEEESTTC--
T ss_pred             ccCccCCEEEECCCeee
Confidence            99999999999999875

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.8e-51  Score=340.54  Aligned_cols=255  Identities=29%  Similarity=0.423  Sum_probs=212.5

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ..+|+++++|++|||||++|||+++|++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++
T Consensus        20 ~~~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (283)
T 3v8b_A           20 FQSMMNQPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDL   99 (283)
T ss_dssp             -------CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhhcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHH
Confidence            4457789999999999999999999999999999988888877665444333322 247899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--CCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--GGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--~~~~~  163 (264)
                      .++++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..  +.++.
T Consensus       100 ~~~~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~  177 (283)
T 3v8b_A          100 VLKFGHLDIVVANAGINGVW-APIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRG-GGAIVVVSSINGTRTFTTPGA  177 (283)
T ss_dssp             HHHHSCCCEEEECCCCCCCB-CCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCSTTC
T ss_pred             HHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CceEEEEcChhhccCCCCCCc
Confidence            99999999999999986542 3788999999999999999999999999999999877 79999999999987  77889


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHH---HhhcCCCCCC-CCCCCChHHHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV---EKLFEPQTPL-EGVVLRAGHVADAV  239 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~edva~~~  239 (264)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++............   .+......|. .+++.+|||||+++
T Consensus       178 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA~~v  257 (283)
T 3v8b_A          178 TAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVAELI  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHHHHH
Confidence            9999999999999999999999999999999999999999765422221111   1112222232 16889999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeeec
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +||+++.++++||++|.+|||+++
T Consensus       258 ~fL~s~~a~~itG~~i~vdGG~~~  281 (283)
T 3v8b_A          258 RFLVSERARHVTGSPVWIDGGQGL  281 (283)
T ss_dssp             HHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             HHHcCccccCCcCCEEEECcCccc
Confidence            999999999999999999999865

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=7.2e-51  Score=336.18  Aligned_cols=244  Identities=25%  Similarity=0.379  Sum_probs=215.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++|++|||||++|||++++++|+++|++|+++.++..+..+...+.+.  ..++.++++|++|+++++++++++.+++++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            589999999999999999999999999988874444444444444332  247899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++...|++||+
T Consensus        83 id~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKa  159 (258)
T 3oid_A           83 LDVFVNNAASGVLR--PVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNG-GGHIVSISSLGSIRYLENYTTVGVSKA  159 (258)
T ss_dssp             CCEEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEEEEGGGTSBCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhCCCCCCcHHHHHHHH
Confidence            99999999987654  888999999999999999999999999999999887 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      |+++|++.++.|++++||+||+|+||+++|++.....  ..++..+.+....|. +++.+|||+|++++||+++..+++|
T Consensus       160 a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~~~dva~~v~~L~s~~~~~it  236 (258)
T 3oid_A          160 ALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFP--NREDLLEDARQNTPA-GRMVEIKDMVDTVEFLVSSKADMIR  236 (258)
T ss_dssp             HHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCT--THHHHHHHHHHHCTT-SSCBCHHHHHHHHHHHTSSTTTTCC
T ss_pred             HHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcc--cCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccCCcc
Confidence            9999999999999999999999999999999986542  223334444455677 8999999999999999999999999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |++|.+|||+++
T Consensus       237 G~~i~vdGG~~~  248 (258)
T 3oid_A          237 GQTIIVDGGRSL  248 (258)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCCccC
Confidence            999999999876

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=1.1e-51  Score=343.33  Aligned_cols=250  Identities=23%  Similarity=0.339  Sum_probs=220.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++|+||++|||||++|||+++|++|+++|++|+++.|+.+...+...+... ..++.++++|++|+++++++++++.+
T Consensus        20 ~~~~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~   99 (271)
T 4ibo_A           20 IIFDLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDE   99 (271)
T ss_dssp             GGGCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            35789999999999999999999999999999988888776655444433322 24789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.++...|+
T Consensus       100 ~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~  176 (271)
T 4ibo_A          100 QGIDVDILVNNAGIQFRK--PMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRG-YGKIVNIGSLTSELARATVAPYT  176 (271)
T ss_dssp             HTCCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HCCCCCEEEECCCCCCCC--CchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhCCCCCCchhHH
Confidence            999999999999987654  888999999999999999999999999999999877 79999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++......  .++..+.+....|. +++.+|||+|++++||+++..
T Consensus       177 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s~~~  253 (271)
T 4ibo_A          177 VAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALID--NPEFDAWVKARTPA-KRWGKPQELVGTAVFLSASAS  253 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHH--CHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhccc--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999998765421  12333444445676 899999999999999999999


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      +++||++|.+|||++++
T Consensus       254 ~~itG~~i~vdGG~~~~  270 (271)
T 4ibo_A          254 DYVNGQIIYVDGGMLSV  270 (271)
T ss_dssp             TTCCSCEEEESTTGGGB
T ss_pred             cCCCCcEEEECCCeecc
Confidence            99999999999998763

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-51  Score=342.05  Aligned_cols=250  Identities=30%  Similarity=0.458  Sum_probs=219.1

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ..|+.++++|++|||||++|||+++|++|+++|++|+++.|+.+...+...+... ..++.++.+|++|.++++++++++
T Consensus        20 ~~m~~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   99 (270)
T 3ftp_A           20 GSMDKTLDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVEST   99 (270)
T ss_dssp             ---CCTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHH
Confidence            4456679999999999999999999999999999988888876655433322221 246789999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .++++++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++...
T Consensus       100 ~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  176 (270)
T 3ftp_A          100 LKEFGALNVLVNNAGITQDQ--LAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKAR-GGRIVNITSVVGSAGNPGQVN  176 (270)
T ss_dssp             HHHHSCCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHH
T ss_pred             HHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCchh
Confidence            99999999999999987654  788899999999999999999999999999998877 799999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+++|++.++.|++++||+||+|+||+++|++....   . ++....+....|. +++.+|||+|++++||+++
T Consensus       177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~-~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~  251 (270)
T 3ftp_A          177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGL---P-QEQQTALKTQIPL-GRLGSPEDIAHAVAFLASP  251 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHS---C-HHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhc---C-HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCC
Confidence            999999999999999999999999999999999999987643   1 3334445556677 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      ...++||++|.+|||+.++
T Consensus       252 ~~~~itG~~i~vdGG~~~s  270 (270)
T 3ftp_A          252 QAGYITGTTLHVNGGMFMS  270 (270)
T ss_dssp             GGTTCCSCEEEESTTSSCC
T ss_pred             CcCCccCcEEEECCCcccC
Confidence            9999999999999999875

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.9e-51  Score=340.24  Aligned_cols=252  Identities=25%  Similarity=0.410  Sum_probs=211.0

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+.++.+|++|||||++|||+++|++|+++|++|+++.|+..+..+.+.+.+.   ..++.++++|++|.++++++++++
T Consensus        19 ~~~~l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~   98 (281)
T 3v2h_A           19 YFQSMMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMV   98 (281)
T ss_dssp             ---CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHH
Confidence            46678999999999999999999999999999998888866554444444432   357899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .++++++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...
T Consensus        99 ~~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  175 (281)
T 3v2h_A           99 ADRFGGADILVNNAGVQFVE--KIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKG-WGRIINIASAHGLVASPFKSA  175 (281)
T ss_dssp             HHHTSSCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHH
T ss_pred             HHHCCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCcccccCCCCchH
Confidence            99999999999999987654  788999999999999999999999999999999877 799999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-------hHH-HHhhcCCCCCCCCCCCChHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-------ADE-VEKLFEPQTPLEGVVLRAGHVAD  237 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~edva~  237 (264)
                      |++||+|+++|++.++.|++++||+||+|+||+++|++........       .++ ..+.+....|. +++.+|||+|+
T Consensus       176 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~edvA~  254 (281)
T 3v2h_A          176 YVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPT-KKFITVEQVAS  254 (281)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTT-CSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCC-CCccCHHHHHH
Confidence            9999999999999999999999999999999999999876442211       111 11224445666 89999999999


Q ss_pred             HHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          238 AVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       238 ~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++||+++..+++||++|.+|||++++
T Consensus       255 ~v~~L~s~~a~~itG~~i~vdGG~~~q  281 (281)
T 3v2h_A          255 LALYLAGDDAAQITGTHVSMDGGWTAQ  281 (281)
T ss_dssp             HHHHHHSSGGGGCCSCEEEESTTGGGC
T ss_pred             HHHHHcCCCcCCCCCcEEEECCCccCC
Confidence            999999999999999999999999874

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-50  Score=336.73  Aligned_cols=246  Identities=31%  Similarity=0.460  Sum_probs=217.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |+.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+.  ..++.++.+|++|+++++++++++.++
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (271)
T 3tzq_B            5 MTAELENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDT   82 (271)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHH
Confidence            456799999999999999999999999999999988888877654444333  346788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+......++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.++...|++
T Consensus        83 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  161 (271)
T 3tzq_B           83 FGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAG-GGAIVNISSATAHAAYDMSTAYAC  161 (271)
T ss_dssp             HSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSBCSSCHHHHH
T ss_pred             cCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCHHHcCCCCCChHHHH
Confidence            9999999999998754445788999999999999999999999999999999877 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ||+|+++|+++++.|++++||+||+|+||+++|++.....   .++....+....|. +++.+|||+|++++||+++...
T Consensus       162 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~-~r~~~p~dvA~~v~~L~s~~~~  237 (271)
T 3tzq_B          162 TKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL---PQPIVDIFATHHLA-GRIGEPHEIAELVCFLASDRAA  237 (271)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC------CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccC
Confidence            9999999999999999999999999999999999875322   23444555566677 8999999999999999999999


Q ss_pred             CeeccEEEecCee
Q 041914          249 FVTGHDLVVDGGF  261 (264)
Q Consensus       249 ~~~G~~i~~dgG~  261 (264)
                      ++||++|.+|||+
T Consensus       238 ~itG~~i~vdGG~  250 (271)
T 3tzq_B          238 FITGQVIAADSGL  250 (271)
T ss_dssp             TCCSCEEEESTTT
T ss_pred             CcCCCEEEECCCc
Confidence            9999999999993

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=9e-51  Score=336.72  Aligned_cols=252  Identities=25%  Similarity=0.348  Sum_probs=219.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      |+..+++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+
T Consensus         5 m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (264)
T 3ucx_A            5 MGGLLTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMK   84 (264)
T ss_dssp             --CTTTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCcCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999988888876655443333322 34789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||..... .++.+.+.++|++.+++|+.+++++++.++|.|.+++  |+||++||..+..+.+++..|+
T Consensus        85 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~  161 (264)
T 3ucx_A           85 AYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK--GAVVNVNSMVVRHSQAKYGAYK  161 (264)
T ss_dssp             HTSCCSEEEECCCSCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT--CEEEEECCGGGGCCCTTCHHHH
T ss_pred             HcCCCcEEEECCCCCCCC-CCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEECcchhccCCCccHHHH
Confidence            999999999999986432 4888999999999999999999999999999998764  8999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.....       ....++..+.+....|. +++.+|||+|++++
T Consensus       162 asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~  240 (264)
T 3ucx_A          162 MAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDL-KRLPTEDEVASAIL  240 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSS-SSCCBHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCc-ccCCCHHHHHHHHH
Confidence            99999999999999999999999999999999999876432       12234445555666777 89999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeecC
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ||+++..+++||++|.+|||++++
T Consensus       241 ~L~s~~~~~itG~~i~vdGG~~~~  264 (264)
T 3ucx_A          241 FMASDLASGITGQALDVNCGEYKA  264 (264)
T ss_dssp             HHHSGGGTTCCSCEEEESTTSSCC
T ss_pred             HHcCccccCCCCCEEEECCCccCC
Confidence            999999999999999999999874

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=4.2e-51  Score=335.50  Aligned_cols=246  Identities=28%  Similarity=0.387  Sum_probs=213.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+++||++|||||++|||++++++|+++|++|+++.|+.+...+... .. ..++.++++|++|+++++++++++.+.++
T Consensus         2 ~~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (247)
T 3rwb_A            2 ERLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAA-SI-GKKARAIAADISDPGSVKALFAEIQALTG   79 (247)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-HH-CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence            46889999999999999999999999999998888887665544333 33 34788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|+|++++..++||++||..+..+.+++..|++||
T Consensus        80 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK  157 (247)
T 3rwb_A           80 GIDILVNNASIVPFV--AWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAK  157 (247)
T ss_dssp             CCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHH
Confidence            999999999998654  788999999999999999999999999999998865368999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|++.++.|++++||+||+|+||+++|++......   +..........|. +++.+|||+|++++||+++..+++
T Consensus       158 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~~~~-~r~~~pedva~~v~~L~s~~~~~i  233 (247)
T 3rwb_A          158 GGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPH---NEAFGFVEMLQAM-KGKGQPEHIADVVSFLASDDARWI  233 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGG---GGGHHHHHHHSSS-CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccCh---hHHHHHHhccccc-CCCcCHHHHHHHHHHHhCccccCC
Confidence            999999999999999999999999999999998764321   1111111111345 788999999999999999999999


Q ss_pred             eccEEEecCeeecC
Q 041914          251 TGHDLVVDGGFLIR  264 (264)
Q Consensus       251 ~G~~i~~dgG~~~~  264 (264)
                      ||++|.+|||++.+
T Consensus       234 tG~~i~vdGG~~~~  247 (247)
T 3rwb_A          234 TGQTLNVDAGMVRH  247 (247)
T ss_dssp             CSCEEEESTTSSCC
T ss_pred             CCCEEEECCCccCC
Confidence            99999999998753

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=100.00  E-value=6.3e-51  Score=338.71  Aligned_cols=250  Identities=30%  Similarity=0.422  Sum_probs=216.5

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ..++.+|++|++|||||++|||++++++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|.+++++++++
T Consensus        10 ~~~~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   89 (270)
T 3is3_A           10 TYIPGRLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQ   89 (270)
T ss_dssp             -CCTTCCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred             ccCCCCcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence            3446679999999999999999999999999999988888876655554444432  35789999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC-CCCCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA-GSCGGKRR  163 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~-~~~~~~~~  163 (264)
                      +.++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||.. ...+.++.
T Consensus        90 ~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~  164 (270)
T 3is3_A           90 AVAHFGHLDIAVSNSGVVSFG--HLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTE---GGRIVLTSSNTSKDFSVPKH  164 (270)
T ss_dssp             HHHHHSCCCEEECCCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCTTTTTCCCTTC
T ss_pred             HHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCeEEEEeCchhccCCCCCC
Confidence            999999999999999998654  8889999999999999999999999999999976   57999999998 56788899


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--------CCChHHHHhhcCCCCCCCCCCCChHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--------GMPADEVEKLFEPQTPLEGVVLRAGHV  235 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~edv  235 (264)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++.....        ....++....+....|. +|+.+|||+
T Consensus       165 ~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dv  243 (270)
T 3is3_A          165 SLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL-HRNGWPQDV  243 (270)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT-CSCBCHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC-CCCCCHHHH
Confidence            999999999999999999999999999999999999999875321        11233344444445677 899999999


Q ss_pred             HHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          236 ADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       236 a~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |++++||+++..+++||++|.+|||+.
T Consensus       244 A~~v~~L~s~~~~~itG~~i~vdGG~~  270 (270)
T 3is3_A          244 ANVVGFLVSKEGEWVNGKVLTLDGGAA  270 (270)
T ss_dssp             HHHHHHHTSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHHHcCCccCCccCcEEEeCCCCC
Confidence            999999999999999999999999973

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=1.2e-50  Score=337.96  Aligned_cols=250  Identities=33%  Similarity=0.511  Sum_probs=218.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..+++++|++|||||++|||++++++|+++|++|+++.|+.+...+... .. ..++.++++|++|.++++++++++.++
T Consensus        21 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~   98 (277)
T 4dqx_A           21 QSMDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVAN-EI-GSKAFGVRVDVSSAKDAESMVEKTTAK   98 (277)
T ss_dssp             -CCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hh-CCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3457899999999999999999999999999998888887665544333 33 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|++
T Consensus        99 ~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  175 (277)
T 4dqx_A           99 WGRVDVLVNNAGFGTTG--NVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNG-GGSIINTTSYTATSAIADRTAYVA  175 (277)
T ss_dssp             HSCCCEEEECCCCCCCB--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTT-CEEEEEECCGGGTSCCTTBHHHHH
T ss_pred             cCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhCcCCCCChhHHH
Confidence            99999999999987654  788899999999999999999999999999998877 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ||+|+++|++.++.|++++||+||+|+||+++|++......  .........+....|. +++.+|||+|++++||+++.
T Consensus       176 sKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s~~  254 (277)
T 4dqx_A          176 SKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVM-DRMGTAEEIAEAMLFLASDR  254 (277)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcc-cCCcCHHHHHHHHHHHhCCc
Confidence            99999999999999999999999999999999998443221  1222333335556677 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      .+++||++|.+|||++++
T Consensus       255 ~~~itG~~i~vdGG~~~~  272 (277)
T 4dqx_A          255 SRFATGSILTVDGGSSIG  272 (277)
T ss_dssp             GTTCCSCEEEESSSSSSC
T ss_pred             cCCCcCCEEEECCchhhh
Confidence            999999999999998763

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=8.7e-51  Score=333.48  Aligned_cols=243  Identities=28%  Similarity=0.488  Sum_probs=217.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +.+|++|||||++|||++++++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|.++++++++++.++++
T Consensus         2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g   81 (246)
T 3osu_A            2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFG   81 (246)
T ss_dssp             CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4679999999999999999999999999988888876555454444432  34788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++...|++||
T Consensus        82 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (246)
T 3osu_A           82 SLDVLVNNAGITRDN--LLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQR-SGAIINLSSVVGAVGNPGQANYVATK  158 (246)
T ss_dssp             CCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhcCCCCCChHHHHHH
Confidence            999999999987654  788999999999999999999999999999998877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|++.++.|++++||+||+|+||++.|++....    .++..+.+....|. +++.+|||+|++++||+++...++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l~s~~~~~i  233 (246)
T 3osu_A          159 AGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDAL----SDELKEQMLTQIPL-ARFGQDTDIANTVAFLASDKAKYI  233 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCS----CHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHhcccCeEEEEEEECCCcCCccccc----CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999999999987543    23444555566777 899999999999999999999999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      ||++|.+|||++|
T Consensus       234 tG~~i~vdgG~~~  246 (246)
T 3osu_A          234 TGQTIHVNGGMYM  246 (246)
T ss_dssp             CSCEEEESTTSCC
T ss_pred             CCCEEEeCCCccC
Confidence            9999999999875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=100.00  E-value=2.8e-50  Score=339.44  Aligned_cols=256  Identities=31%  Similarity=0.454  Sum_probs=213.5

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC------------chhhHHHHHhhh-CCCcEEEEEecC
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI------------QDELGRQVATSI-GVGKCHYVHCDV   72 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~-~~~~~~~~~~D~   72 (264)
                      ...|+.+++||++|||||++|||+++|++|+++|++|+++.|+            .++..+...+.. ...++.++++|+
T Consensus        19 p~~m~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv   98 (299)
T 3t7c_A           19 PGSMAGKVEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDV   98 (299)
T ss_dssp             ---CCCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             CcccccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCC
Confidence            3445667999999999999999999999999999999888876            222222222222 235789999999


Q ss_pred             CCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           73 TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        73 s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      +|.++++++++++.++++++|+||||||+.... .++.+.+.++|++++++|+.+++++++.++|.|.+++..|+||++|
T Consensus        99 ~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~is  177 (299)
T 3t7c_A           99 RDFDAMQAAVDDGVTQLGRLDIVLANAALASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTS  177 (299)
T ss_dssp             TCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEC
Confidence            999999999999999999999999999987654 2588899999999999999999999999999998764368999999


Q ss_pred             CCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----------CCChHHHH--hhcC
Q 041914          153 SVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----------GMPADEVE--KLFE  220 (264)
Q Consensus       153 s~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----------~~~~~~~~--~~~~  220 (264)
                      |..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|+|.....          ........  ....
T Consensus       178 S~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (299)
T 3t7c_A          178 SIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASRQM  257 (299)
T ss_dssp             CGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHHHH
T ss_pred             ChhhccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999875310          00111111  1122


Q ss_pred             CCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          221 PQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       221 ~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ...|  +++.+|||||++++||+++..+++||++|.+|||++++
T Consensus       258 ~~~p--~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l~  299 (299)
T 3t7c_A          258 HVLP--IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALLK  299 (299)
T ss_dssp             SSSS--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             cccC--cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCcccC
Confidence            2233  67889999999999999999999999999999999886

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.6e-51  Score=341.11  Aligned_cols=248  Identities=33%  Similarity=0.480  Sum_probs=211.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..+++||++|||||++|||++++++|+++|++|+++.|+.+...+... .. ..++.++++|++|+++++++++++.+++
T Consensus        24 ~~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  101 (277)
T 3gvc_A           24 HPDLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAAT-KI-GCGAAACRVDVSDEQQIIAMVDACVAAF  101 (277)
T ss_dssp             ---CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-HH-CSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-Hc-CCcceEEEecCCCHHHHHHHHHHHHHHc
Confidence            356899999999999999999999999999998888887665544333 33 3468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .|+||++||..+..+.++...|++|
T Consensus       102 g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~as  178 (277)
T 3gvc_A          102 GGVDKLVANAGVVHLA--SLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERG-GGAIVNLSSLAGQVAVGGTGAYGMS  178 (277)
T ss_dssp             SSCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCchhHHHH
Confidence            9999999999997654  788999999999999999999999999999999877 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC---CCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP---QTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |+|++.|++.++.|++++||+||+|+||+++|++..................   ..|. +++.+|||+|++++||++++
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s~~  257 (277)
T 3gvc_A          179 KAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQ-GRMAAPEEMAGIVVFLLSDD  257 (277)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHH-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccc-cCCCCHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999998754322111111111111   1233 78899999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      .+++||++|.+|||++.
T Consensus       258 a~~itG~~i~vdGG~~~  274 (277)
T 3gvc_A          258 ASMITGTTQIADGGTIA  274 (277)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             cCCccCcEEEECCcchh
Confidence            99999999999999875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=7.3e-51  Score=339.93  Aligned_cols=252  Identities=27%  Similarity=0.375  Sum_probs=197.2

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+|.++.+|++|||||++|||++++++|+++|++|+++.++..+..+...+.+.  ..++.++++|++|+++++++++++
T Consensus        22 ~mm~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  101 (280)
T 4da9_A           22 SMMTQKARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAV  101 (280)
T ss_dssp             -CCSCCCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHH
T ss_pred             hhhhccCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHH
Confidence            356678999999999999999999999999999998888766554444444332  347899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~~  163 (264)
                      .++++++|+||||||+......++.+.+.++|++.+++|+.+++++++.++|.|.+++  ..++||++||..+..+.++.
T Consensus       102 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~  181 (280)
T 4da9_A          102 VAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPER  181 (280)
T ss_dssp             HHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CC
T ss_pred             HHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCc
Confidence            9999999999999998543334888999999999999999999999999999998743  15799999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC-CCCCCCCCCChHHHHHHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP-QTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~edva~~~~~l  242 (264)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++......    ........ ..|. +++.+|||+|++++||
T Consensus       182 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~----~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  256 (280)
T 4da9_A          182 LDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSG----KYDGLIESGLVPM-RRWGEPEDIGNIVAGL  256 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC---------------------------CCBCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcch----hHHHHHhhcCCCc-CCcCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999998764421    12222222 4566 8899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++...++||++|.+|||++++
T Consensus       257 ~s~~~~~itG~~i~vdGG~~~~  278 (280)
T 4da9_A          257 AGGQFGFATGSVIQADGGLSIG  278 (280)
T ss_dssp             HTSTTGGGTTCEEEESTTCC--
T ss_pred             hCccccCCCCCEEEECCCcccC
Confidence            9999999999999999999864

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.2e-50  Score=334.77  Aligned_cols=250  Identities=24%  Similarity=0.420  Sum_probs=213.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+|++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+++
T Consensus         2 ~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (257)
T 3imf_A            2 NAMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKF   81 (257)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999988888876655443333322 2478999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|+|.+++..++||++||..+..+.++...|++|
T Consensus        82 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~as  159 (257)
T 3imf_A           82 GRIDILINNAAGNFIC--PAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAA  159 (257)
T ss_dssp             SCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHH
Confidence            9999999999987654  88899999999999999999999999999999554337899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhC-cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          170 KHAVIGLVRSASVQLG-VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       170 K~al~~~~~~la~e~~-~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      |+|+++|++.++.|++ ++||+||+|+||+++|++........ ++..+.+....|. +++.+|||+|++++||+++..+
T Consensus       160 Kaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~  237 (257)
T 3imf_A          160 KAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWIS-EEMAKRTIQSVPL-GRLGTPEEIAGLAYYLCSDEAA  237 (257)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC--------CCSHHHHTTSTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccC-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhc
Confidence            9999999999999997 77999999999999999764322111 1222233445666 8899999999999999999999


Q ss_pred             CeeccEEEecCeeecC
Q 041914          249 FVTGHDLVVDGGFLIR  264 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~~  264 (264)
                      ++||++|.+|||++++
T Consensus       238 ~itG~~i~vdGG~~~~  253 (257)
T 3imf_A          238 YINGTCMTMDGGQHLH  253 (257)
T ss_dssp             TCCSCEEEESTTTTSC
T ss_pred             CccCCEEEECCCcccC
Confidence            9999999999999764

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=100.00  E-value=2.7e-50  Score=336.83  Aligned_cols=252  Identities=28%  Similarity=0.444  Sum_probs=212.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-----------hhhHHHHHhhh--CCCcEEEEEecCCCH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-----------DELGRQVATSI--GVGKCHYVHCDVTNE   75 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~D~s~~   75 (264)
                      +|.++++|++|||||++|||+++|++|+++|++|+++.|+.           .+..+...+..  ...++.++++|++|+
T Consensus         4 ~m~~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   83 (281)
T 3s55_A            4 SMADFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDR   83 (281)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            45679999999999999999999999999999988888862           22222222222  235789999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++++++++++.++++++|+||||||+....  ++.+.+.++|++++++|+.++++++++++|+|.+++ .|+||++||..
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~  160 (281)
T 3s55_A           84 AALESFVAEAEDTLGGIDIAITNAGISTIA--LLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRN-YGRIVTVSSML  160 (281)
T ss_dssp             HHHHHHHHHHHHHHTCCCEEEECCCCCCCC--CTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGG
T ss_pred             HHHHHHHHHHHHhcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChh
Confidence            999999999999999999999999987654  788999999999999999999999999999998877 79999999999


Q ss_pred             CCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----------CCChHHHHhhc-CCCCC
Q 041914          156 GSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----------GMPADEVEKLF-EPQTP  224 (264)
Q Consensus       156 ~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----------~~~~~~~~~~~-~~~~~  224 (264)
                      +..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++.....          .....+....+ ....+
T Consensus       161 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (281)
T 3s55_A          161 GHSANFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFASLHLQ  240 (281)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHHHHCSS
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHHhhhcc
Confidence            99999999999999999999999999999999999999999999999875310          01111111111 11122


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      . +++.+|||+|++++||+++..+++||++|.+|||+.++
T Consensus       241 ~-~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~  279 (281)
T 3s55_A          241 Y-APFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR  279 (281)
T ss_dssp             S-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             C-cCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence            2 78899999999999999999999999999999998764

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-50  Score=337.48  Aligned_cols=251  Identities=31%  Similarity=0.419  Sum_probs=211.4

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC------------chhhHHHHHhhh--CCCcEEEEEecCCC
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI------------QDELGRQVATSI--GVGKCHYVHCDVTN   74 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~--~~~~~~~~~~D~s~   74 (264)
                      |+.++++|++|||||++|||+++|++|+++|++|+++.|+            ..+..+...+..  ...++.++.+|++|
T Consensus         5 m~~~l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~   84 (277)
T 3tsc_A            5 MAGKLEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRD   84 (277)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred             cccccCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCC
Confidence            4567999999999999999999999999999998888773            222223322222  23578999999999


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           75 ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      .++++++++++.++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|.+++..|+||++||.
T Consensus        85 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~  162 (277)
T 3tsc_A           85 FDRLRKVVDDGVAALGRLDIIVANAGVAAPQ--AWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSA  162 (277)
T ss_dssp             HHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCG
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccH
Confidence            9999999999999999999999999998654  78899999999999999999999999999999886536899999999


Q ss_pred             CCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-------ChHHHHhhcCCCCCCCC
Q 041914          155 AGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-------PADEVEKLFEPQTPLEG  227 (264)
Q Consensus       155 ~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~  227 (264)
                      .+..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++.......       ..+.....+....|  .
T Consensus       163 ~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p--~  240 (277)
T 3tsc_A          163 AGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQLSHVLTPFLP--D  240 (277)
T ss_dssp             GGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGGGTTTTCCSSS--C
T ss_pred             hhCCCCCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHHHHHHhhhccC--C
Confidence            99999999999999999999999999999999999999999999999986531000       00111122223333  3


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++.+|||+|++++||+++..+++||++|.+|||+++
T Consensus       241 r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  276 (277)
T 3tsc_A          241 WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGSTQ  276 (277)
T ss_dssp             SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCccc
Confidence            789999999999999999999999999999999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1e-50  Score=337.12  Aligned_cols=244  Identities=30%  Similarity=0.522  Sum_probs=216.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++++|++|||||++|||+++|++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|.++++++++++.+
T Consensus        23 ~~~l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~  102 (269)
T 4dmm_A           23 ALPLTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIE  102 (269)
T ss_dssp             -CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3568999999999999999999999999999998888866655454444332  34789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|.+++ .|+||++||..+..+.++...|+
T Consensus       103 ~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  179 (269)
T 4dmm_A          103 RWGRLDVLVNNAGITRDT--LLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQR-SGRIINIASVVGEMGNPGQANYS  179 (269)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCHHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCchhHH
Confidence            999999999999987654  788999999999999999999999999999998877 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC-C
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR-D  246 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~-~  246 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++....       ..+.+....|. +++.+|+|+|++++||+++ .
T Consensus       180 asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-------~~~~~~~~~p~-~r~~~~~dvA~~v~~l~s~~~  251 (269)
T 4dmm_A          180 AAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL-------AAEKLLEVIPL-GRYGEAAEVAGVVRFLAADPA  251 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH-------HHHHHGGGCTT-SSCBCHHHHHHHHHHHHHCGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc-------cHHHHHhcCCC-CCCCCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999987532       11333445666 8999999999999999997 7


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..++||++|.+|||++++
T Consensus       252 ~~~itG~~i~vdGG~~~s  269 (269)
T 4dmm_A          252 AAYITGQVINIDGGLVMA  269 (269)
T ss_dssp             GGGCCSCEEEESTTSCCC
T ss_pred             cCCCcCCEEEECCCeecC
Confidence            889999999999999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=1.6e-50  Score=338.23  Aligned_cols=252  Identities=31%  Similarity=0.416  Sum_probs=217.6

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      .|..++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+....    .++.++++|++|+++++++++
T Consensus         4 ~m~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~   83 (281)
T 3svt_A            4 SMQLSFQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVD   83 (281)
T ss_dssp             ----CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHH
T ss_pred             CCccCcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHH
Confidence            3566799999999999999999999999999999888888776654443333222    278999999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++.++++++|+||||||+.... .++.+.+.++|++.+++|+.++++++++++|.|.+++ .|+||++||..+..+.++.
T Consensus        84 ~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  161 (281)
T 3svt_A           84 AVTAWHGRLHGVVHCAGGSENI-GPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGG-GGSFVGISSIAASNTHRWF  161 (281)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTC
T ss_pred             HHHHHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEeCHHHcCCCCCC
Confidence            9999999999999999984432 3788999999999999999999999999999999877 7999999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+++++|++.++.|++++||+||+|+||+++|++......  .++....+....|. +++.+|+|+|++++||+
T Consensus       162 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~p~-~r~~~~~dva~~~~~l~  238 (281)
T 3svt_A          162 GAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITE--SAELSSDYAMCTPL-PRQGEVEDVANMAMFLL  238 (281)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--CHHHHHHHHHHCSS-SSCBCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhccc--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999999765422  12333334445566 88999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeecC
Q 041914          244 CRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++..+++||+.|.+|||+.++
T Consensus       239 s~~~~~itG~~~~vdgG~~~~  259 (281)
T 3svt_A          239 SDAASFVTGQVINVDGGQMLR  259 (281)
T ss_dssp             SGGGTTCCSCEEEESTTGGGS
T ss_pred             CcccCCCCCCEEEeCCChhcc
Confidence            999999999999999998764

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=4.6e-51  Score=336.77  Aligned_cols=245  Identities=31%  Similarity=0.448  Sum_probs=212.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      |.+++||++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.. ..++.++++|++|+++++++++++.+.+
T Consensus         3 m~~l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (255)
T 4eso_A            3 MGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIAR-IREEF-GPRVHALRSDIADLNEIAVLGAAAGQTL   80 (255)
T ss_dssp             -CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH-GGGEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHh-CCcceEEEccCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999998888887665533 33333 2478999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+..+.++...|++|
T Consensus        81 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as  155 (255)
T 4eso_A           81 GAIDLLHINAGVSELE--PFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIRE---GGSIVFTSSVADEGGHPGMSVYSAS  155 (255)
T ss_dssp             SSEEEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCGGGSSBCTTBHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhc---CCEEEEECChhhcCCCCCchHHHHH
Confidence            9999999999987654  8889999999999999999999999999999866   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh---HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA---DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |+|+++|++.++.|++++||+||+|+||+++|++..... ...   +..........|. +|+.+|||+|++++||+++ 
T Consensus       156 Kaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~-  232 (255)
T 4eso_A          156 KAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAG-ITEAERAEFKTLGDNITPM-KRNGTADEVARAVLFLAFE-  232 (255)
T ss_dssp             HHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTT-SCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHHT-
T ss_pred             HHHHHHHHHHHHHHHhhhCcEEEEEecCcccCccccccc-CChhhHHHHHHHHhccCCC-CCCcCHHHHHHHHHHHcCc-
Confidence            999999999999999999999999999999999875421 121   1222233334566 8999999999999999998 


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      .+++||++|.+|||+..+
T Consensus       233 ~~~itG~~i~vdGG~~~~  250 (255)
T 4eso_A          233 ATFTTGAKLAVDGGLGQK  250 (255)
T ss_dssp             CTTCCSCEEEESTTTTTT
T ss_pred             CcCccCCEEEECCCcccc
Confidence            899999999999998754

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=3.5e-50  Score=335.07  Aligned_cols=247  Identities=37%  Similarity=0.569  Sum_probs=216.0

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .++++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++|+++++++++++.+
T Consensus        26 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~  105 (276)
T 3r1i_A           26 DLFDLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTG  105 (276)
T ss_dssp             GGGCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence            35689999999999999999999999999999999988877665443333322 24788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--CCCch
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--~~~~~  165 (264)
                      +++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.  ++...
T Consensus       106 ~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~  183 (276)
T 3r1i_A          106 ELGGIDIAVCNAGIVSVQ--AMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSH  183 (276)
T ss_dssp             HHSCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHH
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcch
Confidence            999999999999988655  78899999999999999999999999999999887634899999999987654  36788


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|++.|++.++.|++++||+||+|+||+++|++.....     +....+....|. +++.+|||+|++++||+++
T Consensus       184 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~-----~~~~~~~~~~p~-~r~~~pedvA~~v~fL~s~  257 (276)
T 3r1i_A          184 YCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLA-----DYHALWEPKIPL-GRMGRPEELTGLYLYLASA  257 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGG-----GGHHHHGGGSTT-SSCBCGGGSHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccch-----HHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999976541     223334455677 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++||++|.+|||+++
T Consensus       258 ~~~~itG~~i~vdGG~~~  275 (276)
T 3r1i_A          258 ASSYMTGSDIVIDGGYTC  275 (276)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCccCcEEEECcCccC
Confidence            999999999999999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=2.9e-50  Score=335.06  Aligned_cols=248  Identities=25%  Similarity=0.410  Sum_probs=214.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++++||++|||||++|||+++|++|+++|++|+++.|. +...+...+... ..++.++++|++|.++++++.+. .+
T Consensus        25 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~-~~  102 (273)
T 3uf0_A           25 GPFSLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVADLADLEGAANVAEE-LA  102 (273)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHH-HH
T ss_pred             cccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH-HH
Confidence            3567999999999999999999999999999998888854 433333333322 24789999999999999999554 45


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|.|++++ .|+||++||..+..+.++...|+
T Consensus       103 ~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~  179 (273)
T 3uf0_A          103 ATRRVDVLVNNAGIIARA--PAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHG-SGRIVTIASMLSFQGGRNVAAYA  179 (273)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSCHHHH
T ss_pred             hcCCCcEEEECCCCCCCC--CchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchHhcCCCCCChhHH
Confidence            668999999999997654  888999999999999999999999999999999877 79999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||++.|++......  .++....+....|. +++.+|||+|++++||+++..
T Consensus       180 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s~~a  256 (273)
T 3uf0_A          180 ASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRA--DDERAAEITARIPA-GRWATPEDMVGPAVFLASDAA  256 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--SHHHHHHHHHHSTT-SSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhccc--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999998765432  12333334445666 899999999999999999999


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      +++||++|.+|||+.++
T Consensus       257 ~~itG~~i~vdGG~~~s  273 (273)
T 3uf0_A          257 SYVHGQVLAVDGGWLAS  273 (273)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCCcCCEEEECcCccCC
Confidence            99999999999999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.6e-50  Score=337.54  Aligned_cols=249  Identities=27%  Similarity=0.360  Sum_probs=218.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.+|++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..  ...++.++++|++|+++++++++++.+
T Consensus        22 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~  101 (277)
T 4fc7_A           22 PDLLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALK  101 (277)
T ss_dssp             TTTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999888888766544443332  235789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|+
T Consensus       102 ~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  178 (277)
T 4fc7_A          102 EFGRIDILINCAAGNFLC--PAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDH-GGVIVNITATLGNRGQALQVHAG  178 (277)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCSHHHHTCTTCHHHH
T ss_pred             HcCCCCEEEECCcCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhCCCCCCcHHHH
Confidence            999999999999987654  788999999999999999999999999999998766 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||++.|++........ +..........|. +|+.+|||+|++++||+++..
T Consensus       179 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~p~-~r~~~p~dvA~~v~fL~s~~~  256 (277)
T 4fc7_A          179 SAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGP-QASLSTKVTASPL-QRLGNKTEIAHSVLYLASPLA  256 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCC-HHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCC-HHHHHHHhccCCC-CCCcCHHHHHHHHHHHcCCcc
Confidence            99999999999999999999999999999999998654332222 2333334445677 899999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      +++||++|.+|||+.+
T Consensus       257 ~~itG~~i~vdGG~~~  272 (277)
T 4fc7_A          257 SYVTGAVLVADGGAWL  272 (277)
T ss_dssp             TTCCSCEEEESTTHHH
T ss_pred             CCcCCCEEEECCCccc
Confidence            9999999999999875

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=3.3e-50  Score=335.82  Aligned_cols=247  Identities=30%  Similarity=0.403  Sum_probs=216.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++|++|||||++|||+++|++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++++.+++++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999988888876665444443332 247899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHH--HHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR--VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~--~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|  .|++++ .|+||++||..+..+.++...|++|
T Consensus       102 id~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~-~g~iV~isS~~~~~~~~~~~~Y~as  178 (279)
T 3sju_A          102 IGILVNSAGRNGGG--ETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAG-WGRIVNIASTGGKQGVMYAAPYTAS  178 (279)
T ss_dssp             CCEEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHT-CEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CcEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcC-CcEEEEECChhhccCCCCChhHHHH
Confidence            99999999987654  788999999999999999999999999999  577766 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      |+|+++|++.++.|++++||+||+|+||+++|++.....       ....++..+.+....|. +++.+|||+|++++||
T Consensus       179 Kaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L  257 (279)
T 3sju_A          179 KHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL-GRYSTPEEVAGLVGYL  257 (279)
T ss_dssp             HHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT-SSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999876432       11334555566667777 8999999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++...++||++|.+|||+++
T Consensus       258 ~s~~a~~itG~~i~vdGG~~~  278 (279)
T 3sju_A          258 VTDAAASITAQALNVCGGLGN  278 (279)
T ss_dssp             TSSGGGGCCSCEEEESTTCCC
T ss_pred             hCccccCcCCcEEEECCCccC
Confidence            999999999999999999875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.2e-49  Score=338.10  Aligned_cols=254  Identities=30%  Similarity=0.460  Sum_probs=213.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-----------hhhHHHHHhhh--CCCcEEEEEecCCCH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-----------DELGRQVATSI--GVGKCHYVHCDVTNE   75 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~D~s~~   75 (264)
                      .|.+++||++|||||++|||+++|++|+++|++|+++.++.           .+..+...+.+  ...++.++++|++|+
T Consensus        40 ~m~~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~  119 (317)
T 3oec_A           40 RMNRLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDL  119 (317)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCH
T ss_pred             hhhccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCH
Confidence            35679999999999999999999999999999988887651           22222222222  234789999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++++++++++.++++++|+||||||+....  ++.+.+.++|++++++|+.++++++++++|.|.+++..|+||++||..
T Consensus       120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~  197 (317)
T 3oec_A          120 ASLQAVVDEALAEFGHIDILVSNVGISNQG--EVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTV  197 (317)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHH
Confidence            999999999999999999999999987654  788999999999999999999999999999998865468999999999


Q ss_pred             CCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc----------cCCChHHHHhhcCCCCCC
Q 041914          156 GSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA----------YGMPADEVEKLFEPQTPL  225 (264)
Q Consensus       156 ~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~  225 (264)
                      +..+.++...|++||+|+++|++.++.|++++||+||+|+||+++|++....          .....++....+......
T Consensus       198 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (317)
T 3oec_A          198 GLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFSQLTLL  277 (317)
T ss_dssp             GSSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHTTTCSS
T ss_pred             hcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHhhhccC
Confidence            9999999999999999999999999999999999999999999999986421          011122222222222222


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      .+++.+|||||++++||+++..+++||++|.+|||+++|
T Consensus       278 p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~~~  316 (317)
T 3oec_A          278 PIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQLAR  316 (317)
T ss_dssp             SSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGGC
T ss_pred             CCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchhhc
Confidence            267889999999999999999999999999999999876

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.3e-50  Score=334.68  Aligned_cols=242  Identities=29%  Similarity=0.399  Sum_probs=205.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+++|++|||||++|||+++|++|+++|++|+++.++..+..+.+.+...  ..++.++++|++|+++++++++++.+.+
T Consensus        24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~  103 (267)
T 3u5t_A           24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAF  103 (267)
T ss_dssp             ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            46899999999999999999999999999988886766655555444432  3478999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++   .|+||++||..+..+.++...|++|
T Consensus       104 g~iD~lvnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as  178 (267)
T 3u5t_A          104 GGVDVLVNNAGIMPLT--TIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRV---GGRIINMSTSQVGLLHPSYGIYAAA  178 (267)
T ss_dssp             SCEEEEEECCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCTHHHHCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCeEEEEeChhhccCCCCchHHHHH
Confidence            9999999999997654  8889999999999999999999999999999965   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+++|++.++.|++++||+||+|+||+++|++.....   .++..+.+....|. +++.+|||+|++++||+++...+
T Consensus       179 Kaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~  254 (267)
T 3u5t_A          179 KAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGK---SDEVRDRFAKLAPL-ERLGTPQDIAGAVAFLAGPDGAW  254 (267)
T ss_dssp             HHHHHHHHHHHHHHTTTSCCEEEEEEECCBC--------------CHHHHHTSSTT-CSCBCHHHHHHHHHHHHSTTTTT
T ss_pred             HHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccC---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccC
Confidence            999999999999999999999999999999999875432   12233444556677 89999999999999999999999


Q ss_pred             eeccEEEecCeee
Q 041914          250 VTGHDLVVDGGFL  262 (264)
Q Consensus       250 ~~G~~i~~dgG~~  262 (264)
                      +||++|.+|||++
T Consensus       255 itG~~i~vdGG~~  267 (267)
T 3u5t_A          255 VNGQVLRANGGII  267 (267)
T ss_dssp             CCSEEEEESSSCC
T ss_pred             ccCCEEEeCCCcC
Confidence            9999999999974

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=1.2e-50  Score=337.71  Aligned_cols=248  Identities=21%  Similarity=0.275  Sum_probs=214.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ++++++||++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++.+|++|.++++++++++.+
T Consensus        27 ~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~  106 (275)
T 4imr_A           27 TIFGLRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEA  106 (275)
T ss_dssp             HHHCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999999998887665444433322 35789999999999999999999988


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      . +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++...|+
T Consensus       107 ~-g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~  182 (275)
T 4imr_A          107 I-APVDILVINASAQINA--TLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARK-WGRVVSIGSINQLRPKSVVTAYA  182 (275)
T ss_dssp             H-SCCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHH
T ss_pred             h-CCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCchhhH
Confidence            7 9999999999987654  788999999999999999999999999999998877 79999999999999988889999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.........+..........|. +|+.+|||+|++++||+++..
T Consensus       183 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~s~~a  261 (275)
T 4imr_A          183 ATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM-GRAGRPEEMVGAALFLASEAC  261 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT-CSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc-CCCcCHHHHHHHHHHHcCccc
Confidence            9999999999999999999999999999999999987643221222222222222255 889999999999999999999


Q ss_pred             CCeeccEEEecCee
Q 041914          248 EFVTGHDLVVDGGF  261 (264)
Q Consensus       248 ~~~~G~~i~~dgG~  261 (264)
                      +++||++|.+|||+
T Consensus       262 ~~itG~~i~vdGG~  275 (275)
T 4imr_A          262 SFMTGETIFLTGGY  275 (275)
T ss_dssp             TTCCSCEEEESSCC
T ss_pred             CCCCCCEEEeCCCC
Confidence            99999999999996

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5.6e-50  Score=334.69  Aligned_cols=254  Identities=30%  Similarity=0.423  Sum_probs=210.9

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC------------chhhHHHHHhhhC--CCcEEEEEec
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI------------QDELGRQVATSIG--VGKCHYVHCD   71 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~------------~~~~~~~~~~~~~--~~~~~~~~~D   71 (264)
                      +..+|.+++||++|||||++|||+++|++|+++|++|+++.|+            ..+..+.+.+.+.  ..++.++++|
T Consensus         6 ~~~~~~~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D   85 (280)
T 3pgx_A            6 VAGQAGSLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLD   85 (280)
T ss_dssp             -----CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECC
T ss_pred             hhccccccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcC
Confidence            3445778999999999999999999999999999998888873            2333333333332  2478999999


Q ss_pred             CCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEe
Q 041914           72 VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCT  151 (264)
Q Consensus        72 ~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~i  151 (264)
                      ++|+++++++++++.++++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++++..|+||++
T Consensus        86 v~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~i  163 (280)
T 3pgx_A           86 VRDDAALRELVADGMEQFGRLDVVVANAGVLSWG--RVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVV  163 (280)
T ss_dssp             TTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence            9999999999999999999999999999997654  78899999999999999999999999999999876436899999


Q ss_pred             cCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC----hHHHHhh--cCCCCCC
Q 041914          152 ASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP----ADEVEKL--FEPQTPL  225 (264)
Q Consensus       152 ss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~--~~~~~~~  225 (264)
                      ||..+..+.++...|++||+|+++|+++++.|++++||+||+|+||+++|++........    .+...+.  .....| 
T Consensus       164 sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  242 (280)
T 3pgx_A          164 SSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFVHSFPPMPVQP-  242 (280)
T ss_dssp             CCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGGGGSCCBTTBC-
T ss_pred             cchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhhhhhhhcccCC-
Confidence            999999999999999999999999999999999999999999999999999865310000    0001111  112223 


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                       .++.+|||+|++++||+++..+++||++|.+|||+++
T Consensus       243 -~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~  279 (280)
T 3pgx_A          243 -NGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGALK  279 (280)
T ss_dssp             -SSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTGGG
T ss_pred             -CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccC
Confidence             3688999999999999999999999999999999864

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=100.00  E-value=1.1e-49  Score=329.70  Aligned_cols=252  Identities=31%  Similarity=0.472  Sum_probs=203.4

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++++|++|||||++|||++++++|+++|++|+++.|+.++..+. .+... .++.++.+|++|.++++++++++.++
T Consensus         3 ~~m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~   80 (261)
T 3n74_A            3 GSMSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERV-AGEIG-DAALAVAADISKEADVDAAVEAALSK   80 (261)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHC-TTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHhC-CceEEEEecCCCHHHHHHHHHHHHHh
Confidence            34678999999999999999999999999999988888876655443 33332 36899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC---CCcEEEEecCCCCCCCCCCCch
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG---VRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~---~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++++   ..++||++||..+..+.+++..
T Consensus        81 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~  159 (261)
T 3n74_A           81 FGKVDILVNNAGIGHKP-QNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAW  159 (261)
T ss_dssp             HSCCCEEEECCCCCCCS-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHH
T ss_pred             cCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccH
Confidence            99999999999987532 3778889999999999999999999999999998642   2478999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+++|++.++.|++++||+||+|+||+++|++.........++..+.+....|. +++.+|||+|++++||+++
T Consensus       160 Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~  238 (261)
T 3n74_A          160 YNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPM-GRLLKPDDLAEAAAFLCSP  238 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTT-SSCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCc-CCCcCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999998765443344445555666677 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      ..+++||++|.+|||+.+.
T Consensus       239 ~~~~itG~~i~vdgG~~~~  257 (261)
T 3n74_A          239 QASMITGVALDVDGGRSIG  257 (261)
T ss_dssp             GGTTCCSCEEEESTTTTC-
T ss_pred             cccCcCCcEEEecCCcccC
Confidence            9999999999999998763

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.8e-50  Score=329.54  Aligned_cols=247  Identities=27%  Similarity=0.377  Sum_probs=200.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+ + ..++.++++|++|+++++++++++.+++
T Consensus         2 ~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   79 (257)
T 3tpc_A            2 VMQLKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAE-L-GAAVRFRNADVTNEADATAALAFAKQEF   79 (257)
T ss_dssp             --CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHH-h-CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence            4678999999999999999999999999999998888887665443322 2 2367899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCC--CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----CCCcEEEEecCCCCCCCCCC
Q 041914           90 GQLDIMFSNAGILSSSD--QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-----GVRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~~~~iv~iss~~~~~~~~~  162 (264)
                      +++|+||||||+.....  .+..+.+.++|++.+++|+.+++++++.++|+|+++     +..|+||++||..+..+.++
T Consensus        80 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~  159 (257)
T 3tpc_A           80 GHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIG  159 (257)
T ss_dssp             SCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             CCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCC
Confidence            99999999999876541  012367899999999999999999999999999874     12689999999999999999


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ...|++||+|+++|++.++.|++++||+||+|+||+++|++.....    ++..+.+....|..+++.+|||+|++++||
T Consensus       160 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~----~~~~~~~~~~~p~~~r~~~~~dva~~v~~l  235 (257)
T 3tpc_A          160 QAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP----QDVQDALAASVPFPPRLGRAEEYAALVKHI  235 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------CCSSSSCSCBCHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC----HHHHHHHHhcCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999875432    223334445556547899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++  .++||++|.+|||+.+.
T Consensus       236 ~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tpc_A          236 CEN--TMLNGEVIRLDGALRMA  255 (257)
T ss_dssp             HHC--TTCCSCEEEESTTCCC-
T ss_pred             ccc--CCcCCcEEEECCCccCC
Confidence            974  79999999999999863

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=1.4e-49  Score=334.09  Aligned_cols=252  Identities=23%  Similarity=0.292  Sum_probs=209.1

Q ss_pred             cccccccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      |+..+.++++|++|||||+  +|||+++|++|+++|++|+++.|+.. ..+.+.+... .+++.++++|++|.+++++++
T Consensus        22 ~~~~~~~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~  100 (293)
T 3grk_A           22 MTAQSGLLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDA-LKKRVEPLAEELGAFVAGHCDVADAASIDAVF  100 (293)
T ss_dssp             -----CTTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHH-HHHHHHHHHHHHTCEEEEECCTTCHHHHHHHH
T ss_pred             CCcccccCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCceEEECCCCCHHHHHHHH
Confidence            4555677999999999999  55999999999999999888887743 2222222221 136889999999999999999


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG  160 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~  160 (264)
                      +++.++++++|+||||||+....  ..++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+..+.
T Consensus       101 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~  177 (293)
T 3grk_A          101 ETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMAD---GGSILTLTYYGAEKVM  177 (293)
T ss_dssp             HHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTT---CEEEEEEECGGGTSBC
T ss_pred             HHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccC---CCEEEEEeehhhccCC
Confidence            99999999999999999987520  237888999999999999999999999999999975   5899999999999999


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      +++..|++||+|+++|++.++.|++++||+||+|+||+++|++.....  ..++....+....|. +++.+|||+|++++
T Consensus       178 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedvA~~v~  254 (293)
T 3grk_A          178 PNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIG--DFRYILKWNEYNAPL-RRTVTIDEVGDVGL  254 (293)
T ss_dssp             TTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------C--CHHHHHHHHHHHSTT-SSCCCHHHHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhccc--chHHHHHHHHhcCCC-CCCCCHHHHHHHHH
Confidence            999999999999999999999999999999999999999999876432  223334444445666 89999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeecC
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ||+++..+++||++|.+|||+.++
T Consensus       255 ~L~s~~~~~itG~~i~vdGG~~~~  278 (293)
T 3grk_A          255 YFLSDLSRSVTGEVHHADSGYHVI  278 (293)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGGB
T ss_pred             HHcCccccCCcceEEEECCCcccC
Confidence            999999999999999999999863

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.2e-49  Score=330.92  Aligned_cols=242  Identities=28%  Similarity=0.380  Sum_probs=211.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++++|++|||||++|||++++++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|+++++++++++.+
T Consensus        26 ~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  105 (271)
T 3v2g_A           26 SISLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVE  105 (271)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999988887877655554444432  35789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-CCCCchh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-GKRRTDY  166 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-~~~~~~y  166 (264)
                      +++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++   .++||++||..+..+ .++...|
T Consensus       106 ~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y  180 (271)
T 3v2g_A          106 ALGGLDILVNSAGIWHSA--PLEETTVADFDEVMAVNFRAPFVAIRSASRHLGD---GGRIITIGSNLAELVPWPGISLY  180 (271)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCT---TCEEEEECCGGGTCCCSTTCHHH
T ss_pred             HcCCCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc---CCEEEEEeChhhccCCCCCchHH
Confidence            999999999999987654  8899999999999999999999999999999965   579999999877655 6889999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++......     ..+......|. +++.+|||+|++++||+++.
T Consensus       181 ~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-----~~~~~~~~~~~-~r~~~pedvA~~v~fL~s~~  254 (271)
T 3v2g_A          181 SASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-----HAEAQRERIAT-GSYGEPQDIAGLVAWLAGPQ  254 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-----SHHHHHHTCTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-----hHHHHHhcCCC-CCCCCHHHHHHHHHHHhCcc
Confidence            9999999999999999999999999999999999998754211     11222234566 88999999999999999999


Q ss_pred             CCCeeccEEEecCeee
Q 041914          247 SEFVTGHDLVVDGGFL  262 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~  262 (264)
                      .+++||++|.+|||++
T Consensus       255 ~~~itG~~i~vdGG~~  270 (271)
T 3v2g_A          255 GKFVTGASLTIDGGAN  270 (271)
T ss_dssp             GTTCCSCEEEESTTTT
T ss_pred             cCCccCCEEEeCcCcc
Confidence            9999999999999975

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=100.00  E-value=6.9e-50  Score=330.49  Aligned_cols=245  Identities=26%  Similarity=0.379  Sum_probs=201.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ++++++|++|||||++|||++++++|+++|++|+++.++..+..+...+.+.  ..++.++++|++|.++++++++++.+
T Consensus         3 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   82 (259)
T 3edm_A            3 LQRFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAAD   82 (259)
T ss_dssp             -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999988886666555444444332  24788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDY  166 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y  166 (264)
                      +++++|+||||||..... .++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+. .+.++...|
T Consensus        83 ~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~~Y  158 (259)
T 3edm_A           83 KFGEIHGLVHVAGGLIAR-KTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAK---GGAIVTFSSQAGRDGGGPGALAY  158 (259)
T ss_dssp             HHCSEEEEEECCCCCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHCCSTTCHHH
T ss_pred             HhCCCCEEEECCCccCCC-CChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CCEEEEEcCHHhccCCCCCcHHH
Confidence            999999999999977332 37889999999999999999999999999999976   5799999999988 788899999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|+++. |+||+|+||+++|++......   ++..+.+....|. +++.+|||+|++++||+++.
T Consensus       159 ~asKaa~~~l~~~la~e~~~~-I~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~p~-~r~~~pedva~~v~~L~s~~  233 (259)
T 3edm_A          159 ATSKGAVMTFTRGLAKEVGPK-IRVNAVCPGMISTTFHDTFTK---PEVRERVAGATSL-KREGSSEDVAGLVAFLASDD  233 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTT-CEEEEEEECCBCC--------------------------CCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHCCC-CEEEEEEECCCcCcccccccC---hHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            999999999999999999986 999999999999998765421   3333444555677 88999999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..++||++|.+|||++.
T Consensus       234 ~~~itG~~i~vdGg~~~  250 (259)
T 3edm_A          234 AAYVTGACYDINGGVLF  250 (259)
T ss_dssp             GTTCCSCEEEESBCSSB
T ss_pred             ccCccCCEEEECCCcCC
Confidence            99999999999999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=100.00  E-value=3.4e-49  Score=324.12  Aligned_cols=245  Identities=26%  Similarity=0.400  Sum_probs=217.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.++++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (247)
T 3lyl_A            2 SLNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENL   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            57899999999999999999999999999988888877655443333222 24789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++||
T Consensus        82 ~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (247)
T 3lyl_A           82 AIDILVNNAGITRDN--LMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKR-WGRIISIGSVVGSAGNPGQTNYCAAK  158 (247)
T ss_dssp             CCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCcHHHHHHH
Confidence            999999999988654  788899999999999999999999999999998877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|++.|++.++.|++++||++|+|+||++.|++....    .++....+....|. +++.+|||+|++++||+++...++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~-~~~~~~~dva~~i~~l~s~~~~~~  233 (247)
T 3lyl_A          159 AGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKL----TDEQKSFIATKIPS-GQIGEPKDIAAAVAFLASEEAKYI  233 (247)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTS----CHHHHHHHHTTSTT-CCCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhc----cHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhCCCcCCc
Confidence            9999999999999999999999999999999987643    23334445556676 889999999999999999999999


Q ss_pred             eccEEEecCeeecC
Q 041914          251 TGHDLVVDGGFLIR  264 (264)
Q Consensus       251 ~G~~i~~dgG~~~~  264 (264)
                      +|++|.+|||+++.
T Consensus       234 tG~~i~vdgG~~~~  247 (247)
T 3lyl_A          234 TGQTLHVNGGMYMA  247 (247)
T ss_dssp             CSCEEEESTTSSCC
T ss_pred             cCCEEEECCCEecC
Confidence            99999999999873

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=100.00  E-value=1.8e-49  Score=333.33  Aligned_cols=246  Identities=29%  Similarity=0.425  Sum_probs=217.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..+++||++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|+++++++++++.+
T Consensus        42 ~~~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  121 (291)
T 3ijr_A           42 SEKLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVR  121 (291)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHH
Confidence            3468999999999999999999999999999999998887755554444432  24789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++   .++||++||..+..+.++...|+
T Consensus       122 ~~g~iD~lvnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~  197 (291)
T 3ijr_A          122 QLGSLNILVNNVAQQYPQ-QGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQ---GDVIINTASIVAYEGNETLIDYS  197 (291)
T ss_dssp             HHSSCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCT---TCEEEEECCTHHHHCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh---CCEEEEEechHhcCCCCCChhHH
Confidence            999999999999987543 37888999999999999999999999999999965   47999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.....   .++....+....|. +++.+|||+|++++||+++..
T Consensus       198 asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L~s~~~  273 (291)
T 3ijr_A          198 ATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSF---DEKKVSQFGSNVPM-QRPGQPYELAPAYVYLASSDS  273 (291)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHS---CHHHHHHTTTTSTT-SSCBCGGGTHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccC---CHHHHHHHHccCCC-CCCcCHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999875432   23334455666777 899999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      +++||++|.+|||+++
T Consensus       274 ~~itG~~i~vdGG~~~  289 (291)
T 3ijr_A          274 SYVTGQMIHVNGGVIV  289 (291)
T ss_dssp             TTCCSCEEEESSSCCC
T ss_pred             CCCcCCEEEECCCccc
Confidence            9999999999999986

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=100.00  E-value=1.7e-49  Score=329.52  Aligned_cols=248  Identities=22%  Similarity=0.344  Sum_probs=211.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      |.+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..   ....+.++.+|++++++++++++  
T Consensus         4 m~~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--   81 (267)
T 3t4x_A            4 MHMQLKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--   81 (267)
T ss_dssp             CCCCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--
T ss_pred             cccccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--
Confidence            4567899999999999999999999999999999888888766544433322   13468889999999998877654  


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                        +++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++...
T Consensus        82 --~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  156 (267)
T 3t4x_A           82 --KYPKVDILINNLGIFEPV--EYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERK-EGRVIFIASEAAIMPSQEMAH  156 (267)
T ss_dssp             --HCCCCSEEEECCCCCCCC--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-EEEEEEECCGGGTSCCTTCHH
T ss_pred             --hcCCCCEEEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEEcchhhccCCCcchH
Confidence              578999999999997654  788999999999999999999999999999999877 799999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHH----hhcCCCCCCCCCCCChHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVE----KLFEPQTPLEGVVLRAGH  234 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~----~~~~~~~~~~~~~~~~ed  234 (264)
                      |++||+|+++|++.++.|++++||+||+|+||+++|++.....       ....++..    ....+..|. +|+.+|||
T Consensus       157 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~ped  235 (267)
T 3t4x_A          157 YSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSII-QRLIRPEE  235 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSS-CSCBCTHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccc-cCccCHHH
Confidence            9999999999999999999999999999999999999765321       11112221    222344556 89999999


Q ss_pred             HHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          235 VADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       235 va~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +|++++||+++..+++||++|.+|||+..+
T Consensus       236 vA~~v~fL~s~~~~~itG~~i~vdGG~~~s  265 (267)
T 3t4x_A          236 IAHLVTFLSSPLSSAINGSALRIDGGLVRS  265 (267)
T ss_dssp             HHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred             HHHHHHHHcCccccCccCCeEEECCCcccc
Confidence            999999999999999999999999998753

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=100.00  E-value=1.1e-48  Score=324.50  Aligned_cols=248  Identities=28%  Similarity=0.407  Sum_probs=210.1

Q ss_pred             ccccCCCcEEEEeCCC-ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGA-SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas-~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+.++++|++|||||+ +|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|.++++++++++
T Consensus        16 ~~~~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~   95 (266)
T 3o38_A           16 GHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQT   95 (266)
T ss_dssp             CCSTTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHH
Confidence            4567899999999998 5999999999999999988888887765544433322  247999999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++..++||++||..+..+.++...
T Consensus        96 ~~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  173 (266)
T 3o38_A           96 VEKAGRLDVLVNNAGLGGQT--PVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSH  173 (266)
T ss_dssp             HHHHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHH
T ss_pred             HHHhCCCcEEEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCch
Confidence            99999999999999987654  7889999999999999999999999999999998743789999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|++.|++.++.|++++||+||+|+||+++|++.....   .++..+.+....|. +++.+|||+|++++||+++
T Consensus       174 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~-~r~~~~~dva~~i~~l~s~  249 (266)
T 3o38_A          174 YAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTS---SSELLDRLASDEAF-GRAAEPWEVAATIAFLASD  249 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC--------------------CCTT-SSCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccC---cHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHcCc
Confidence            9999999999999999999999999999999999999876542   23334444555666 8899999999999999999


Q ss_pred             CCCCeeccEEEecCeee
Q 041914          246 DSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~  262 (264)
                      ..+++||++|.+|||++
T Consensus       250 ~~~~~tG~~i~vdgG~~  266 (266)
T 3o38_A          250 YSSYMTGEVVSVSSQRA  266 (266)
T ss_dssp             GGTTCCSCEEEESSCCC
T ss_pred             cccCccCCEEEEcCCcC
Confidence            99999999999999974

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=100.00  E-value=1e-49  Score=335.52  Aligned_cols=249  Identities=20%  Similarity=0.226  Sum_probs=213.7

Q ss_pred             ccccCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .++++++|++|||||++  |||+++|++|+++|++|+++.|+.+.. +.+.+... .+.+.++++|++|.++++++++++
T Consensus        24 ~~~~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  102 (296)
T 3k31_A           24 TGMLMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFK-KRVDPLAESLGVKLTVPCDVSDAESVDNMFKVL  102 (296)
T ss_dssp             CCCTTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             chhccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHH-HHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHH
Confidence            45678999999999997  999999999999999988888875432 22222221 134688999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      .++++++|+||||||+....  ..++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+..+.+++
T Consensus       103 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~---~g~IV~isS~~~~~~~~~~  179 (296)
T 3k31_A          103 AEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTN---GGSILTLSYYGAEKVVPHY  179 (296)
T ss_dssp             HHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTTT
T ss_pred             HHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCEEEEEEehhhccCCCCc
Confidence            99999999999999987531  137888999999999999999999999999999976   5899999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+|+++|+++++.|++++||+||+|+||+++|++.....  ..+.....+....|. +++.+|||+|++++||+
T Consensus       180 ~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL~  256 (296)
T 3k31_A          180 NVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGIS--DFHYILTWNKYNSPL-RRNTTLDDVGGAALYLL  256 (296)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCH--HHHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhccc--chHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHc
Confidence            999999999999999999999999999999999999999875431  112333344445666 89999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeecC
Q 041914          244 CRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++..+++||++|.+|||++++
T Consensus       257 s~~a~~itG~~i~vdGG~~~~  277 (296)
T 3k31_A          257 SDLGRGTTGETVHVDCGYHVV  277 (296)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CCccCCccCCEEEECCCcccc
Confidence            999999999999999999864

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=100.00  E-value=4.1e-50  Score=332.38  Aligned_cols=245  Identities=22%  Similarity=0.320  Sum_probs=203.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch--hhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD--ELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      +++++++|++|||||++|||+++|++|+++|++|+++.|...  +..+.+.+.+.  ..++.++++|++|++++++++++
T Consensus         5 ~~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~   84 (262)
T 3ksu_A            5 KYHDLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDF   84 (262)
T ss_dssp             CCSCCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence            456899999999999999999999999999999888876533  23333333332  24789999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +.++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+..+.++..
T Consensus        85 ~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~---~g~iv~isS~~~~~~~~~~~  159 (262)
T 3ksu_A           85 AEKEFGKVDIAINTVGKVLKK--PIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNP---NGHIITIATSLLAAYTGFYS  159 (262)
T ss_dssp             HHHHHCSEEEEEECCCCCCSS--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEE---EEEEEEECCCHHHHHHCCCC
T ss_pred             HHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcC---CCEEEEEechhhccCCCCCc
Confidence            999999999999999988664  8889999999999999999999999999999943   58999999999998888999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|++||+|+++|+++++.|++++||+||+|+||+++|++.....   .++....+....|. +++.+|||+|++++||++
T Consensus       160 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~-~r~~~pedvA~~v~~L~s  235 (262)
T 3ksu_A          160 TYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQE---TKESTAFHKSQAMG-NQLTKIEDIAPIIKFLTT  235 (262)
T ss_dssp             C-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC---------------CC-CCSCCGGGTHHHHHHHHT
T ss_pred             hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccC---chHHHHHHHhcCcc-cCCCCHHHHHHHHHHHcC
Confidence            99999999999999999999999999999999999999875432   12223334444566 889999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      + ..++||++|.+|||+++
T Consensus       236 ~-~~~itG~~i~vdGg~~~  253 (262)
T 3ksu_A          236 D-GWWINGQTIFANGGYTT  253 (262)
T ss_dssp             T-TTTCCSCEEEESTTCCC
T ss_pred             C-CCCccCCEEEECCCccC
Confidence            8 89999999999999875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=100.00  E-value=1.8e-49  Score=329.13  Aligned_cols=243  Identities=27%  Similarity=0.432  Sum_probs=212.0

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+|++++||++|||||++|||+++|++|+++|++|+++.|+.+...          ....+++|++|.++++++++++.+
T Consensus        21 ~~m~~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~~~~~~~~~~~   90 (266)
T 3uxy_A           21 QSMQGFEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIA----------ADLHLPGDLREAAYADGLPGAVAA   90 (266)
T ss_dssp             -----CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSC----------CSEECCCCTTSHHHHHHHHHHHHH
T ss_pred             hhhhCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH----------hhhccCcCCCCHHHHHHHHHHHHH
Confidence            3467899999999999999999999999999999888887655431          124468999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|+|++++ .|+||++||..+..+.++...|+
T Consensus        91 ~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~  167 (266)
T 3uxy_A           91 GLGRLDIVVNNAGVISRG--RITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAG-GGAIVNVASCWGLRPGPGHALYC  167 (266)
T ss_dssp             HHSCCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTBCCTTBHHHH
T ss_pred             hcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHhCCCCCCChHHH
Confidence            999999999999998664  788999999999999999999999999999999877 79999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc---CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY---GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++.....   ....++..+.+....|. +++.+|||+|++++||++
T Consensus       168 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s  246 (266)
T 3uxy_A          168 LTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPL-GRIAEPEDIADVVLFLAS  246 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999999999999865432   12233334455566677 899999999999999999


Q ss_pred             CCCCCeeccEEEecCeeecC
Q 041914          245 RDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +..+++||++|.+|||+.++
T Consensus       247 ~~~~~itG~~i~vdGG~~~s  266 (266)
T 3uxy_A          247 DAARYLCGSLVEVNGGKAVA  266 (266)
T ss_dssp             GGGTTCCSCEEEESTTCCCC
T ss_pred             chhcCCcCCEEEECcCEeCC
Confidence            99999999999999999874

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=100.00  E-value=5.3e-49  Score=326.63  Aligned_cols=251  Identities=30%  Similarity=0.481  Sum_probs=213.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ..++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++++|++|+++++++++++.
T Consensus         8 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   87 (267)
T 1iy8_A            8 TTRFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATT   87 (267)
T ss_dssp             --CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence            3468899999999999999999999999999988888876654333222211   3478899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++|+||||||+.... .++.+.+.++|++++++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|
T Consensus        88 ~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  165 (267)
T 1iy8_A           88 ERFGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGY  165 (267)
T ss_dssp             HHHSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHH
T ss_pred             HHcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEEcchhhccCCCCCccH
Confidence            9999999999999987541 3788899999999999999999999999999998876 7899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc----cCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA----YGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ++||+++++|++.++.|++++||+||+|+||+++|++....    .....+...+.+....|. +++.+|||+|++++||
T Consensus       166 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dvA~~v~~l  244 (267)
T 1iy8_A          166 AAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEIAAVVAFL  244 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-CSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCC-CCCcCHHHHHHHHHHH
Confidence            99999999999999999999999999999999999986542    111112111133344566 7899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++..++++|++|.+|||+.+
T Consensus       245 ~s~~~~~~tG~~i~vdGG~~~  265 (267)
T 1iy8_A          245 LSDDASYVNATVVPIDGGQSA  265 (267)
T ss_dssp             TSGGGTTCCSCEEEESTTTTT
T ss_pred             cCccccCCCCCEEEECCCccc
Confidence            998899999999999999875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=100.00  E-value=2.3e-49  Score=329.49  Aligned_cols=248  Identities=26%  Similarity=0.407  Sum_probs=214.6

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ...+++++|++|||||++|||+++|++|+++|++|+++.|+..+..+.+.+...  ..++.++++|++|.++++++++++
T Consensus        22 ~~~m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~  101 (271)
T 4iin_A           22 SNAMQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTI  101 (271)
T ss_dssp             --CCCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             hhhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHH
Confidence            345678999999999999999999999999999999999977766555554442  247899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .+.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...
T Consensus       102 ~~~~g~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~  178 (271)
T 4iin_A          102 VQSDGGLSYLVNNAGVVRDK--LAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSR-FGSVVNVASIIGERGNMGQTN  178 (271)
T ss_dssp             HHHHSSCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHH
T ss_pred             HHhcCCCCEEEECCCcCCCc--ccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEechhhcCCCCCchH
Confidence            99999999999999998764  788899999999999999999999999999999877 799999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|++.|++.++.|++++||+||+|+||+++|++.....    ++....+....|. +++.+|||+|++++||+++
T Consensus       179 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~----~~~~~~~~~~~~~-~~~~~p~dvA~~i~~l~s~  253 (271)
T 4iin_A          179 YSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK----DELKADYVKNIPL-NRLGSAKEVAEAVAFLLSD  253 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC----------------CGGGCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc----HHHHHHHHhcCCc-CCCcCHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999999876542    2233334445566 7899999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ...+++|++|.+|||++|
T Consensus       254 ~~~~itG~~i~vdGG~~~  271 (271)
T 4iin_A          254 HSSYITGETLKVNGGLYM  271 (271)
T ss_dssp             GGTTCCSCEEEESTTSCC
T ss_pred             CcCCCcCCEEEeCCCeeC
Confidence            999999999999999975

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=100.00  E-value=1.4e-49  Score=330.37  Aligned_cols=242  Identities=34%  Similarity=0.483  Sum_probs=210.6

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +...++++|++|||||++|||++++++|+++|++|+++.|+.+...         .....+++|++|.++++++++++.+
T Consensus         7 ~~~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~   77 (269)
T 3vtz_A            7 HHMEEFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV---------NVSDHFKIDVTNEEEVKEAVEKTTK   77 (269)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT---------TSSEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc---------CceeEEEecCCCHHHHHHHHHHHHH
Confidence            3456789999999999999999999999999999888888765431         2456889999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|.+++ .|+||++||..+..+.++...|+
T Consensus        78 ~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  154 (269)
T 3vtz_A           78 KYGRIDILVNNAGIEQYS--PLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIG-HGSIINIASVQSYAATKNAAAYV  154 (269)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSBCTTCHHHH
T ss_pred             HcCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCChhHH
Confidence            999999999999987654  788999999999999999999999999999998877 79999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC----CC---hHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----MP---ADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      +||+|+++|++.++.|+++ +|+||+|+||+++|++......    ..   .++..+.+....|. +++.+|||+|++++
T Consensus       155 asKaa~~~l~~~la~e~~~-~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~  232 (269)
T 3vtz_A          155 TSKHALLGLTRSVAIDYAP-KIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPM-GRIGRPEEVAEVVA  232 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTT-SSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcC-CCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            9999999999999999998 8999999999999998653311    01   12333334445666 89999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeec
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ||+++...++||++|.+|||+++
T Consensus       233 ~L~s~~~~~itG~~i~vdGG~~~  255 (269)
T 3vtz_A          233 FLASDRSSFITGACLTVDGGLLS  255 (269)
T ss_dssp             HHHSGGGTTCCSCEEEESTTGGG
T ss_pred             HHhCCccCCCcCcEEEECCCccc
Confidence            99999999999999999999875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-48  Score=323.47  Aligned_cols=248  Identities=20%  Similarity=0.309  Sum_probs=210.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++.+|++|||||++|||++++++|+++|++|+++.|+..+..+.+.+....  .++.++++|++|+++++++++++.++
T Consensus         3 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   82 (264)
T 3i4f_A            3 LGRFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSH   82 (264)
T ss_dssp             ---CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             cccccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHH
Confidence            3466799999999999999999999999999988888887766666555432  47999999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC-CC-CCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV-AG-SCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~-~~-~~~~~~~~~y  166 (264)
                      ++++|+||||||+......++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||. .. ..+.++...|
T Consensus        83 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~iss~~~~~~~~~~~~~~Y  161 (264)
T 3i4f_A           83 FGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQN-FGRIINYGFQGADSAPGWIYRSAF  161 (264)
T ss_dssp             HSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTTGGGCCCCTTCHHH
T ss_pred             hCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCeEEEEeechhcccCCCCCCchh
Confidence            9999999999995444445888999999999999999999999999999999877 7999999998 44 5567788999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|++.|++.++.|++++||+||+|+||++.|++....    .++....+....|. +++.+|||+|++++||+++.
T Consensus       162 ~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~p~-~r~~~~~dva~~v~~l~s~~  236 (264)
T 3i4f_A          162 AAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT----IQEARQLKEHNTPI-GRSGTGEDIARTISFLCEDD  236 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC----HHHHHHC---------CCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc----cHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999987543    23444445555677 88999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..++||++|.+|||+.++
T Consensus       237 ~~~itG~~i~vdGG~~~~  254 (264)
T 3i4f_A          237 SDMITGTIIEVTGAVDVI  254 (264)
T ss_dssp             GTTCCSCEEEESCSCCCC
T ss_pred             cCCCCCcEEEEcCceeec
Confidence            999999999999999763

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=100.00  E-value=2.8e-49  Score=332.54  Aligned_cols=248  Identities=27%  Similarity=0.358  Sum_probs=214.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch-hhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD-ELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.++.+ ...+.+.+..  ...++.++++|++|.++++++++++.
T Consensus        44 ~~~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~  123 (294)
T 3r3s_A           44 SGRLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAR  123 (294)
T ss_dssp             CSTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHH
Confidence            45789999999999999999999999999999888877633 3333333332  23478999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+..+.++...|
T Consensus       124 ~~~g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~---~g~Iv~isS~~~~~~~~~~~~Y  199 (294)
T 3r3s_A          124 EALGGLDILALVAGKQTAI-PEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPK---GASIITTSSIQAYQPSPHLLDY  199 (294)
T ss_dssp             HHHTCCCEEEECCCCCCCC-SSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCGGGTSCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCcCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhc---CCEEEEECChhhccCCCCchHH
Confidence            9999999999999986532 37889999999999999999999999999999865   4799999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++.....  ..++....+....|. +++.+|||+|++++||++++
T Consensus       200 ~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~L~s~~  276 (294)
T 3r3s_A          200 AATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGG--QTQDKIPQFGQQTPM-KRAGQPAELAPVYVYLASQE  276 (294)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTT--SCGGGSTTTTTTSTT-SSCBCGGGGHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccC--CCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999843221  122333444556677 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      .+++||++|.+|||+++.
T Consensus       277 ~~~itG~~i~vdGG~~l~  294 (294)
T 3r3s_A          277 SSYVTAEVHGVCGGEHLG  294 (294)
T ss_dssp             GTTCCSCEEEESTTCCCC
T ss_pred             ccCCCCCEEEECCCccCc
Confidence            999999999999999874

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=100.00  E-value=1e-48  Score=323.46  Aligned_cols=239  Identities=19%  Similarity=0.249  Sum_probs=199.7

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++++++|++|||||++|||++++++|+++|++|+++.|+.++..+.+.+.    .+.++.+|++|+++++++++++.+
T Consensus        20 ~~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~   95 (260)
T 3gem_A           20 QGHMTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQA----GAVALYGDFSCETGIMAFIDLLKT   95 (260)
T ss_dssp             -------CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHH----TCEEEECCTTSHHHHHHHHHHHHH
T ss_pred             ccCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhc----CCeEEECCCCCHHHHHHHHHHHHH
Confidence            3467799999999999999999999999999999999999887665444433    368899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||+....  + .+.++++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++...|+
T Consensus        96 ~~g~iD~lv~nAg~~~~~--~-~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~  171 (260)
T 3gem_A           96 QTSSLRAVVHNASEWLAE--T-PGEEADNFTRMFSVHMLAPYLINLHCEPLLTASE-VADIVHISDDVTRKGSSKHIAYC  171 (260)
T ss_dssp             HCSCCSEEEECCCCCCCC--C-TTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGTCCSSCHHHH
T ss_pred             hcCCCCEEEECCCccCCC--C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcEEEEECChhhcCCCCCcHhHH
Confidence            999999999999987654  3 5678899999999999999999999999999877 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|+++ +|+||+|+||++.|++...      +.....+....|. +++.+|||+|++++||+  +.
T Consensus       172 asKaa~~~l~~~la~e~~~-~Irvn~v~PG~v~t~~~~~------~~~~~~~~~~~p~-~r~~~~edva~~v~~L~--~~  241 (260)
T 3gem_A          172 ATKAGLESLTLSFAARFAP-LVKVNGIAPALLMFQPKDD------AAYRANALAKSAL-GIEPGAEVIYQSLRYLL--DS  241 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTT-TCEEEEEEECTTCC---------------------CCS-CCCCCTHHHHHHHHHHH--HC
T ss_pred             HHHHHHHHHHHHHHHHHCC-CCEEEEEeecccccCCCCC------HHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh--hC
Confidence            9999999999999999998 7999999999999987531      2223334445666 88999999999999999  57


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      +++||++|.+|||++++
T Consensus       242 ~~itG~~i~vdGG~~~~  258 (260)
T 3gem_A          242 TYVTGTTLTVNGGRHVK  258 (260)
T ss_dssp             SSCCSCEEEESTTTTTC
T ss_pred             CCCCCCEEEECCCcccC
Confidence            89999999999999874

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=100.00  E-value=9.2e-49  Score=323.96  Aligned_cols=248  Identities=27%  Similarity=0.426  Sum_probs=206.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++|++|||||++|||++++++|+++|++|+++.|+.++..+.+.+.+.   ..++.++++|++|+++++++++++.+++
T Consensus         2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   81 (260)
T 1x1t_A            2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            6789999999999999999999999999988888877651233332221   3468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++|
T Consensus        82 g~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~s  158 (260)
T 1x1t_A           82 GRIDILVNNAGIQHTA--LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAA  158 (260)
T ss_dssp             SCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECcHHhCcCCCCCchHHHH
Confidence            9999999999987544  788899999999999999999999999999998876 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-------ChHHHHhhc-CCCCCCCCCCCChHHHHHHHHH
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-------PADEVEKLF-EPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~~~edva~~~~~  241 (264)
                      |++++.|++.++.|++++||+||+|+||+++|++.......       ..++....+ ....|. +++.+|||+|++++|
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dva~~~~~  237 (260)
T 1x1t_A          159 KHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999999999999999999987543210       001111111 222455 789999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++..++++|++|.+|||+.+|
T Consensus       238 l~s~~~~~~tG~~~~vdgG~~~~  260 (260)
T 1x1t_A          238 LASDAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhChhhcCCCCCEEEECCCccCC
Confidence            99988899999999999999876

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=100.00  E-value=6.6e-49  Score=326.40  Aligned_cols=245  Identities=27%  Similarity=0.418  Sum_probs=213.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +.+|++|||||++|||++++++|+++|++|+++.++..+..+...+.. . ..++.++.+|++|.++++++++++.++++
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            679999999999999999999999999998888866555444433333 2 24789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++||
T Consensus       103 ~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  179 (269)
T 3gk3_A          103 KVDVLINNAGITRDA--TFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERR-FGRIVNIGSVNGSRGAFGQANYASAK  179 (269)
T ss_dssp             CCSEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTBHHHHHHH
T ss_pred             CCCEEEECCCcCCCc--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEeCChhhccCCCCcchHHHHH
Confidence            999999999988654  788899999999999999999999999999998877 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|++.++.|++++||+||+|+||+++|++.....   .+.....+....|. +++.+|+|+|++++||+++...++
T Consensus       180 aa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~~~~~~~~~~~-~~~~~p~dvA~~v~~L~s~~~~~i  255 (269)
T 3gk3_A          180 AGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVP---QDVLEAKILPQIPV-GRLGRPDEVAALIAFLCSDDAGFV  255 (269)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC----------CCSGGGCTT-SSCBCHHHHHHHHHHHTSTTCTTC
T ss_pred             HHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhc---hhHHHHHhhhcCCc-CCccCHHHHHHHHHHHhCCCcCCe
Confidence            99999999999999999999999999999999976442   12222233445566 789999999999999999999999


Q ss_pred             eccEEEecCeeecC
Q 041914          251 TGHDLVVDGGFLIR  264 (264)
Q Consensus       251 ~G~~i~~dgG~~~~  264 (264)
                      ||++|.+|||+.++
T Consensus       256 tG~~i~vdgG~~~s  269 (269)
T 3gk3_A          256 TGADLAINGGMHMS  269 (269)
T ss_dssp             CSCEEEESTTSCCC
T ss_pred             eCcEEEECCCEeCc
Confidence            99999999999875

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-48  Score=324.57  Aligned_cols=251  Identities=24%  Similarity=0.358  Sum_probs=209.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+.
T Consensus        16 ~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   95 (273)
T 1ae1_A           16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   95 (273)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            3468899999999999999999999999999988888876654433332222 246889999999999999999999999


Q ss_pred             c-CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 Y-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      + +++|+||||||+....  ++.+.+.++|++.+++|+.++++++++++|.|++++ .++||++||..+..+.++...|+
T Consensus        96 ~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~  172 (273)
T 1ae1_A           96 FDGKLNILVNNAGVVIHK--EAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYS  172 (273)
T ss_dssp             TTSCCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHH
T ss_pred             cCCCCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcCHhhcCCCCCcchhH
Confidence            9 8999999999987554  788899999999999999999999999999998876 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +||++++.|++.++.|++++||+||+|+||++.|++........  .++..+.+....|. +++.+|||+|++++||+++
T Consensus       173 asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~  251 (273)
T 1ae1_A          173 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALIAFLCFP  251 (273)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999999999999999865432110  11222223333566 7899999999999999999


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      ..++++|++|.+|||+.++
T Consensus       252 ~~~~~tG~~i~vdGG~~~~  270 (273)
T 1ae1_A          252 AASYITGQIIWADGGFTAN  270 (273)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             cccCcCCCEEEECCCcccC
Confidence            8999999999999998753

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=100.00  E-value=2.2e-48  Score=319.75  Aligned_cols=244  Identities=30%  Similarity=0.409  Sum_probs=204.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-hhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+. ++..+.+.+  ...++.++++|++|+++++++++++.+++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   80 (249)
T 2ew8_A            3 QRLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRN--LGRRVLTVKCDVSQPGDVEAFGKQVISTF   80 (249)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHH--TTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHh--cCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999999988887 544333322  12468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++|
T Consensus        81 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~as  157 (249)
T 2ew8_A           81 GRCDILVNNAGIYPLI--PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYIST  157 (249)
T ss_dssp             SCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CeEEEEEcchhhccCCCCchhHHHH
Confidence            9999999999987654  788899999999999999999999999999998876 7899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccc-cccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTC-HAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      |++++.|++.++.|++++||+||+|+||+++|++.. .... ..++..+.+.  .|. +++.+|||+|++++||+++..+
T Consensus       158 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~--~~~-~~~~~p~dva~~~~~l~s~~~~  233 (249)
T 2ew8_A          158 KAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS-AMFDVLPNML--QAI-PRLQVPLDLTGAAAFLASDDAS  233 (249)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------CTT--SSS-CSCCCTHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc-chhhHHHHhh--Ccc-CCCCCHHHHHHHHHHHcCcccC
Confidence            999999999999999999999999999999999865 2210 0011111111  455 7889999999999999998889


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||++.
T Consensus       234 ~~tG~~~~vdGG~~~  248 (249)
T 2ew8_A          234 FITGQTLAVDGGMVR  248 (249)
T ss_dssp             TCCSCEEEESSSCCC
T ss_pred             CCCCcEEEECCCccC
Confidence            999999999999864

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=100.00  E-value=2.7e-48  Score=319.78  Aligned_cols=239  Identities=21%  Similarity=0.335  Sum_probs=207.4

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecC--CCHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDV--TNECQVKALVD   83 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~--s~~~~~~~~~~   83 (264)
                      +....|++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++.+|+  +|.++++++++
T Consensus         5 ~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   84 (252)
T 3f1l_A            5 PKQDLLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQ   84 (252)
T ss_dssp             CCTTTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHH
T ss_pred             CcccccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHH
Confidence            344568999999999999999999999999999988888876655443332221  23678999999  99999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++.+.++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++.
T Consensus        85 ~~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~  162 (252)
T 3f1l_A           85 RIAVNYPRLDGVLHNAGLLGDV-CPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSD-AGSLVFTSSSVGRQGRANW  162 (252)
T ss_dssp             HHHHHCSCCSEEEECCCCCCCC-SCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGTSCCTTC
T ss_pred             HHHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCC-CCEEEEECChhhccCCCCC
Confidence            9999999999999999986432 3788899999999999999999999999999999877 7999999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+|+++|++.++.|+++. |+||+|+||+++|++......            ..+. .++.+|||+++.++||+
T Consensus       163 ~~Y~asK~a~~~l~~~la~e~~~~-irvn~v~PG~v~t~~~~~~~~------------~~~~-~~~~~p~dva~~~~~L~  228 (252)
T 3f1l_A          163 GAYAASKFATEGMMQVLADEYQQR-LRVNCINPGGTRTAMRASAFP------------TEDP-QKLKTPADIMPLYLWLM  228 (252)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEECCSBSSHHHHHHCT------------TCCG-GGSBCTGGGHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHHHHHHhcCC-cEEEEEecCcccCchhhhhCC------------ccch-hccCCHHHHHHHHHHHc
Confidence            999999999999999999999987 999999999999998643211            1122 56789999999999999


Q ss_pred             CCCCCCeeccEEEecCeee
Q 041914          244 CRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++..+++||++|.+|||+.
T Consensus       229 s~~~~~itG~~i~vdgG~~  247 (252)
T 3f1l_A          229 GDDSRRKTGMTFDAQPGRK  247 (252)
T ss_dssp             SGGGTTCCSCEEESSCC--
T ss_pred             CccccCCCCCEEEeCCCcC
Confidence            9999999999999999975

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=100.00  E-value=1.4e-48  Score=324.01  Aligned_cols=247  Identities=29%  Similarity=0.454  Sum_probs=216.8

Q ss_pred             ccccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhH-HHHHhhh--CCCcEEEEEecCCCHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELG-RQVATSI--GVGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus         9 ~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      .++++++|++|||||+  +|||++++++|+++|++|+++.++..+.. +...+..  ...++.++++|++|.++++++++
T Consensus        14 ~~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~   93 (267)
T 3gdg_A           14 DQLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVK   93 (267)
T ss_dssp             HHHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHH
T ss_pred             cccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHH
Confidence            3567999999999999  99999999999999999888888766542 2222222  13578999999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--C
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--K  161 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--~  161 (264)
                      ++.++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.  +
T Consensus        94 ~~~~~~g~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~  170 (267)
T 3gdg_A           94 DVVADFGQIDAFIANAGATADS--GILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERG-TGSLVITASMSGHIANFPQ  170 (267)
T ss_dssp             HHHHHTSCCSEEEECCCCCCCS--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCSSS
T ss_pred             HHHHHcCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcC-CceEEEEccccccccCCCC
Confidence            9999999999999999988665  788899999999999999999999999999999877 7899999999988765  5


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|++||+|++.|++.++.|+++. |+||+|+||+++|++....    .++....+....|. +++.+|||+|++++|
T Consensus       171 ~~~~Y~~sK~a~~~~~~~la~e~~~~-i~v~~v~PG~v~t~~~~~~----~~~~~~~~~~~~~~-~r~~~~~dva~~~~~  244 (267)
T 3gdg_A          171 EQTSYNVAKAGCIHMARSLANEWRDF-ARVNSISPGYIDTGLSDFV----PKETQQLWHSMIPM-GRDGLAKELKGAYVY  244 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHTTTT-CEEEEEEECCEECSCGGGS----CHHHHHHHHTTSTT-SSCEETHHHHHHHHH
T ss_pred             CCCcchHHHHHHHHHHHHHHHHhccC-cEEEEEECCccccchhhhC----CHHHHHHHHhcCCC-CCCcCHHHHHhHhhe
Confidence            78899999999999999999999887 9999999999999987643    23444455556677 899999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |++++..++||++|.+|||+++|
T Consensus       245 l~s~~~~~itG~~i~vdgG~~~r  267 (267)
T 3gdg_A          245 FASDASTYTTGADLLIDGGYTTR  267 (267)
T ss_dssp             HHSTTCTTCCSCEEEESTTGGGC
T ss_pred             eecCccccccCCEEEECCceecC
Confidence            99999999999999999999987

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=100.00  E-value=3.5e-48  Score=320.15  Aligned_cols=245  Identities=30%  Similarity=0.422  Sum_probs=211.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh--hHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE--LGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.++  ..+...+... ..++.++++|++|+++++++++++.+++++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            6899999999999999999999999998888887665  3332222222 247889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCC-cEEEEecCCCCCCCCCCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVR-GSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~-~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ . ++||++||..+..+.++...|++||
T Consensus        82 iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~~~~~~~~~Y~~sK  158 (258)
T 3a28_C           82 FDVLVNNAGIAQIK--PLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELG-VKGKIINAASIAAIQGFPILSAYSTTK  158 (258)
T ss_dssp             CCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCCEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcC-CCcEEEEECcchhccCCCCchhHHHHH
Confidence            99999999987554  788899999999999999999999999999998766 5 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ++++.|++.++.|++++||+||+|+||+++|++.....       ....++..+.+....|. +++.+|||+|++++||+
T Consensus       159 ~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~  237 (258)
T 3a28_C          159 FAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIAL-GRPSVPEDVAGLVSFLA  237 (258)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCC-CCccCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999865421       11112222333344566 78999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++..++++|++|.+|||+.+
T Consensus       238 s~~~~~~tG~~i~vdGG~~~  257 (258)
T 3a28_C          238 SENSNYVTGQVMLVDGGMLY  257 (258)
T ss_dssp             SGGGTTCCSCEEEESSSSCC
T ss_pred             CcccCCCCCCEEEECCCEec
Confidence            99899999999999999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=100.00  E-value=1.4e-48  Score=320.30  Aligned_cols=243  Identities=31%  Similarity=0.503  Sum_probs=210.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++|++|||||++|||++++++|+++|++|+++.|+..+..+.+.+.+.  ..++.++++|++|+++++++++++.++++
T Consensus         2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   81 (246)
T 2uvd_A            2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFG   81 (246)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            6789999999999999999999999999988888844443333333321  34688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||
T Consensus        82 ~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK  158 (246)
T 2uvd_A           82 QVDILVNNAGVTKDN--LLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQR-HGRIVNIASVVGVTGNPGQANYVAAK  158 (246)
T ss_dssp             CCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCHHhcCCCCCCchHHHHH
Confidence            999999999987544  788899999999999999999999999999998776 78999999999988889999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|++.++.|++++||+||+|+||+++|++.....    +.....+....|. +++.+|||+|+.++||+++...++
T Consensus       159 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~~  233 (246)
T 2uvd_A          159 AGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLD----ENIKAEMLKLIPA-AQFGEAQDIANAVTFFASDQSKYI  233 (246)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCC----TTHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcC----HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCC
Confidence            99999999999999999999999999999999875431    1111222233455 789999999999999999888999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.|.+|||+++
T Consensus       234 tG~~~~vdgG~~~  246 (246)
T 2uvd_A          234 TGQTLNVDGGMVM  246 (246)
T ss_dssp             CSCEEEESTTSCC
T ss_pred             CCCEEEECcCccC
Confidence            9999999999864

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=100.00  E-value=2.1e-48  Score=325.20  Aligned_cols=247  Identities=34%  Similarity=0.459  Sum_probs=207.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++||++|||||++|||++++++|+++|++|+++.|+.+...+ +.+.. ..++.++.+|++|.++++++++++.+++++
T Consensus         2 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (281)
T 3zv4_A            2 KLTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRE-LEVAH-GGNAVGVVGDVRSLQDQKRAAERCLAAFGK   79 (281)
T ss_dssp             TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHT-BTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CcCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHH-HHHHc-CCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence            5789999999999999999999999999998888887665433 33333 247899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCC---CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           92 LDIMFSNAGILSSSD---QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        92 id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      +|+||||||+.....   ....+.+.++|++++++|+.++++++++++|+|.++  .|+||++||..+..+.++...|++
T Consensus        80 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~a  157 (281)
T 3zv4_A           80 IDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSS--RGSVVFTISNAGFYPNGGGPLYTA  157 (281)
T ss_dssp             CCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGTSSSSSCHHHHH
T ss_pred             CCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhc--CCeEEEEecchhccCCCCCchhHH
Confidence            999999999865431   122345567899999999999999999999999875  489999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC------hHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP------ADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ||+|+++|+++++.|+++. |+||+|+||+++|+|........      .....+.+....|. +|+.+|||+|++++||
T Consensus       158 sKaa~~~l~~~la~e~~~~-Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL  235 (281)
T 3zv4_A          158 TKHAVVGLVRQMAFELAPH-VRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI-GRMPALEEYTGAYVFF  235 (281)
T ss_dssp             HHHHHHHHHHHHHHHHTTT-SEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT-SSCCCGGGGSHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCC-CEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC-CCCCCHHHHHHHHHHh
Confidence            9999999999999999987 99999999999999875321110      01122334445677 8999999999999999


Q ss_pred             hC-CCCCCeeccEEEecCeeecC
Q 041914          243 AC-RDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s-~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++ +...++||++|.+|||++++
T Consensus       236 ~s~~~~~~itG~~i~vdGG~~~~  258 (281)
T 3zv4_A          236 ATRGDSLPATGALLNYDGGMGVR  258 (281)
T ss_dssp             HSTTTSTTCSSCEEEESSSGGGC
T ss_pred             hcccccccccCcEEEECCCCccc
Confidence            99 78889999999999999874

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.2e-49  Score=327.00  Aligned_cols=248  Identities=30%  Similarity=0.434  Sum_probs=204.6

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-----------hhhHHHHHhhh--CCCcEEEEEecCCCH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-----------DELGRQVATSI--GVGKCHYVHCDVTNE   75 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~D~s~~   75 (264)
                      .+.+++||++|||||++|||++++++|+++|++|+++.|+.           .+..+...+..  ...++.++++|++|+
T Consensus         7 ~~~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   86 (278)
T 3sx2_A            7 SEGPLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDR   86 (278)
T ss_dssp             --CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCH
Confidence            35678999999999999999999999999999988888762           22222222222  124789999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++++++++++.++++++|+||||||+....      .+.++|++++++|+.++++++++++|+|.+++..|+||++||..
T Consensus        87 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~------~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~  160 (278)
T 3sx2_A           87 ESLSAALQAGLDELGRLDIVVANAGIAPMS------AGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSA  160 (278)
T ss_dssp             HHHHHHHHHHHHHHCCCCEEEECCCCCCCS------STHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGG
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCC------CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHH
Confidence            999999999999999999999999986543      25889999999999999999999999998764368999999999


Q ss_pred             CCCCC----CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-hHHHHh------hcCCCCC
Q 041914          156 GSCGG----KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-ADEVEK------LFEPQTP  224 (264)
Q Consensus       156 ~~~~~----~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~------~~~~~~~  224 (264)
                      +..+.    ++...|++||+|+++|++.++.|++++||+||+|+||+++|++........ ......      .+....|
T Consensus       161 ~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p  240 (278)
T 3sx2_A          161 GLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP  240 (278)
T ss_dssp             GTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS
T ss_pred             hcCCCccCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC
Confidence            98776    777889999999999999999999999999999999999999875321000 000000      1222223


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                        +++.+|||+|++++||+++..+++||++|.+|||++++
T Consensus       241 --~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~~k  278 (278)
T 3sx2_A          241 --VEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFLNK  278 (278)
T ss_dssp             --CSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTC
T ss_pred             --cCcCCHHHHHHHHHHHhCcccccccCCEEeECCCcccC
Confidence              68899999999999999999999999999999999875

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-48  Score=323.00  Aligned_cols=246  Identities=31%  Similarity=0.450  Sum_probs=211.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   82 (262)
T 1zem_A            3 KKFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDF   82 (262)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh
Confidence            457899999999999999999999999999988888876654433333222 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCC-CCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           90 GQLDIMFSNAGIL-SSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      +++|+||||||+. ..  .++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++
T Consensus        83 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  159 (262)
T 1zem_A           83 GKIDFLFNNAGYQGAF--APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGT  159 (262)
T ss_dssp             SCCCEEEECCCCCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHH
T ss_pred             CCCCEEEECCCCCCCC--CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCCchHHH
Confidence            9999999999986 33  3788899999999999999999999999999998876 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----------CCC-hHH-HHhhcCCCCCCCCCCCChHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----------GMP-ADE-VEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----------~~~-~~~-~~~~~~~~~~~~~~~~~~edva  236 (264)
                      ||++++.|++.++.|++++||+||+|+||+++|++.....          ... .++ ..+.+....|. +++.+|||+|
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA  238 (262)
T 1zem_A          160 SKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIP  238 (262)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSCBCGGGSH
T ss_pred             HHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC-CCCcCHHHHH
Confidence            9999999999999999999999999999999999865420          011 122 22333334566 7899999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCe
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ++++||+++..+++||++|.+|||
T Consensus       239 ~~v~~l~s~~~~~itG~~i~vdGG  262 (262)
T 1zem_A          239 GVVAFLLGDDSSFMTGVNLPIAGG  262 (262)
T ss_dssp             HHHHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHHHcCchhcCcCCcEEecCCC
Confidence            999999999899999999999998

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=100.00  E-value=4.5e-48  Score=324.83  Aligned_cols=247  Identities=26%  Similarity=0.266  Sum_probs=208.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe-cCchhhHHHHHhhh--CCCcEEEEEecCCCHH---------
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA-DIQDELGRQVATSI--GVGKCHYVHCDVTNEC---------   76 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~---------   76 (264)
                      .|+++++|++|||||++|||++++++|+++|++|+++. |+.+...+...+..  ...++.++++|++|.+         
T Consensus         3 ~m~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~   82 (291)
T 1e7w_A            3 HMTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADG   82 (291)
T ss_dssp             -----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----
T ss_pred             CccCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCccccccccccc
Confidence            35678999999999999999999999999999988888 66554433322221  1347899999999999         


Q ss_pred             --------HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCC--------------HHHHHHHHhhHHHHHHHHHHH
Q 041914           77 --------QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLD--------------FSAFDRLFAINVRGMAACVKH  134 (264)
Q Consensus        77 --------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  134 (264)
                              +++++++++.+.++++|+||||||+....  ++.+.+              .++|++++++|+.+++++++.
T Consensus        83 ~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~  160 (291)
T 1e7w_A           83 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT--PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  160 (291)
T ss_dssp             CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CCCC-------------HHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC--ChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHH
Confidence                    99999999999999999999999987654  677788              999999999999999999999


Q ss_pred             HHHHHHcCCC-----CcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC
Q 041914          135 AARVMVEGGV-----RGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG  209 (264)
Q Consensus       135 ~l~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~  209 (264)
                      ++|.|++++.     .++||++||..+..+.++...|++||+++++|++.++.|++++||+||+|+||+++|+| . .  
T Consensus       161 ~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~--  236 (291)
T 1e7w_A          161 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M--  236 (291)
T ss_dssp             HHHHHHTSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S--
T ss_pred             HHHHHHhcCCCCCCCCcEEEEEechhhcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C--
Confidence            9999987541     48999999999999999999999999999999999999999999999999999999998 4 2  


Q ss_pred             CChHHHHhhcCCCCCCCC-CCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          210 MPADEVEKLFEPQTPLEG-VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~-~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                       . ++..+.+....|. + ++.+|||+|+.++||+++...++||++|.+|||+.++
T Consensus       237 -~-~~~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  289 (291)
T 1e7w_A          237 -P-PAVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  289 (291)
T ss_dssp             -C-HHHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             -C-HHHHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCcccc
Confidence             2 2333334445666 5 8999999999999999998999999999999998764

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=100.00  E-value=1.1e-48  Score=322.77  Aligned_cols=248  Identities=22%  Similarity=0.313  Sum_probs=212.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...++++|++|||||++|||+++|++|+++|++|+++.++..+......+..  ...++.++.+|++|.++++++++++.
T Consensus         7 ~~~~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   86 (256)
T 3ezl_A            7 HHMVMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVK   86 (256)
T ss_dssp             ------CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHH
Confidence            3456789999999999999999999999999998888855443333322222  22478899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.++...|
T Consensus        87 ~~~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  163 (256)
T 3ezl_A           87 AEVGEIDVLVNNAGITRDV--VFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERG-WGRIINISSVNGQKGQFGQTNY  163 (256)
T ss_dssp             HHTCCEEEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCGGGSCSCCHHH
T ss_pred             HhcCCCCEEEECCCCCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEcchhhccCCCCCccc
Confidence            9999999999999988654  788899999999999999999999999999999877 7999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|++++||++|+|+||+++|++.....    ++..+.+....|. +++.+|||+|++++||++++
T Consensus       164 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  238 (256)
T 3ezl_A          164 STAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIR----PDVLEKIVATIPV-RRLGSPDEIGSIVAWLASEE  238 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSC----HHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccC----HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCCc
Confidence            999999999999999999999999999999999999986532    2333333444566 78999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..+++|+.|.+|||+.+.
T Consensus       239 ~~~~tG~~i~vdgG~~~~  256 (256)
T 3ezl_A          239 SGFSTGADFSLNGGLHMG  256 (256)
T ss_dssp             GTTCCSCEEEESTTSCC-
T ss_pred             ccCCcCcEEEECCCEeCc
Confidence            999999999999999863

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=100.00  E-value=5.1e-48  Score=320.01  Aligned_cols=250  Identities=25%  Similarity=0.333  Sum_probs=213.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|+++++++++++.+.
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (263)
T 3ai3_A            3 MGISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS   82 (263)
T ss_dssp             CCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            468899999999999999999999999999988888876554333222211  346889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++
T Consensus        83 ~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  159 (263)
T 3ai3_A           83 FGGADILVNNAGTGSNE--TIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARG-GGAIIHNASICAVQPLWYEPIYNV  159 (263)
T ss_dssp             HSSCSEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhcCCCCCcchHHH
Confidence            99999999999987644  788899999999999999999999999999998776 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHHHHhhcCCC-CCCCCCCCChHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEVEKLFEPQ-TPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~edva~~~~  240 (264)
                      ||++++.|++.++.|++++||+||+|+||++.|++......       ...++....+... .|. +++.+|||+|++++
T Consensus       160 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~  238 (263)
T 3ai3_A          160 TKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPI-KRFASPEELANFFV  238 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTT-CSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999998653210       0012222222222 455 78999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeecC
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ||+++...+++|+.|.+|||+.++
T Consensus       239 ~l~s~~~~~~~G~~~~vdgG~~~s  262 (263)
T 3ai3_A          239 FLCSERATYSVGSAYFVDGGMLKT  262 (263)
T ss_dssp             HHTSTTCTTCCSCEEEESTTCCCC
T ss_pred             HHcCccccCCCCcEEEECCCcccc
Confidence            999988899999999999998764

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=3.5e-48  Score=321.62  Aligned_cols=251  Identities=25%  Similarity=0.386  Sum_probs=213.6

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh--hCCCcEEEEEecCCCHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS--IGVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      .+...++.+|++|||||++|||++++++|+++|++|+++.|+.++..+...+.  ....++.++.+|++|++++++++++
T Consensus        13 ~~~~~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~   92 (267)
T 1vl8_A           13 MKEVFDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEA   92 (267)
T ss_dssp             ----CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence            34456789999999999999999999999999999888888766544333222  1134688899999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC-CCCCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA-GSCGGKRR  163 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~-~~~~~~~~  163 (264)
                      +.++++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||.. +..+.++.
T Consensus        93 ~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~  169 (267)
T 1vl8_A           93 VKEKFGKLDTVVNAAGINRRH--PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNI  169 (267)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSC
T ss_pred             HHHHcCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCcchhccCCCCC
Confidence            999999999999999987654  788899999999999999999999999999998876 78999999999 88888899


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||++++.|++.++.|++++||+||+|+||+++|++...... . ++....+....|. +++.+|+|+|+.++||+
T Consensus       170 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~-~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~  246 (267)
T 1vl8_A          170 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS-D-PEKLDYMLKRIPL-GRTGVPEDLKGVAVFLA  246 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT-C-HHHHHHHHHTCTT-SSCBCGGGGHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcccccccccc-C-hHHHHHHHhhCCC-CCCcCHHHHHHHHHHHc
Confidence            9999999999999999999999999999999999999998754321 1 2222223334566 78999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++..++++|+.|.+|||+++
T Consensus       247 s~~~~~itG~~i~vdGG~~~  266 (267)
T 1vl8_A          247 SEEAKYVTGQIIFVDGGWTA  266 (267)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CccccCCcCCeEEECCCCCC
Confidence            98889999999999999875

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=5.2e-48  Score=316.75  Aligned_cols=239  Identities=34%  Similarity=0.488  Sum_probs=208.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.++..+. .+..   .+.++++|++|+++++++++++.+++++
T Consensus         2 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~g~   77 (245)
T 1uls_A            2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-AEAV---GAHPVVMDVADPASVERGFAEALAHLGR   77 (245)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTT---TCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHc---CCEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999988888876554333 2222   2678999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||.. ..+.++...|++||+
T Consensus        78 id~lvn~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~-~~~~~~~~~Y~asK~  153 (245)
T 1uls_A           78 LDGVVHYAGITRDN--FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASRV-YLGNLGQANYAASMA  153 (245)
T ss_dssp             CCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCGG-GGCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEccch-hcCCCCchhHHHHHH
Confidence            99999999987554  788899999999999999999999999999998876 79999999999 888889999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +++.|++.++.|++++||+||+|+||+++|++....   . ++..+.+....|. +++.+|+|+|+.++||+++...+++
T Consensus       154 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~~p~-~~~~~~~dvA~~v~~l~s~~~~~~t  228 (245)
T 1uls_A          154 GVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV---P-EKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFIT  228 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS---C-HHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhc---C-HHHHHHHHhhCCC-CCCcCHHHHHHHHHHHhCchhcCCc
Confidence            999999999999999999999999999999987532   2 2222223334566 7899999999999999998899999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |+.|.+|||+.+
T Consensus       229 G~~~~vdgG~~~  240 (245)
T 1uls_A          229 GQVLFVDGGRTI  240 (245)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CCEEEECCCccc
Confidence            999999999865

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.5e-48  Score=323.91  Aligned_cols=246  Identities=24%  Similarity=0.393  Sum_probs=211.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+....+++.++++|++|+++++++++++.+.+
T Consensus        24 ~~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  103 (276)
T 2b4q_A           24 YFSLAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS  103 (276)
T ss_dssp             TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence            45689999999999999999999999999999888888765544333332222368889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCC----cEEEEecCCCCCCCCCCCc-
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVR----GSIVCTASVAGSCGGKRRT-  164 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~----~~iv~iss~~~~~~~~~~~-  164 (264)
                      +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .    ++||++||..+..+.++.. 
T Consensus       104 g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~~~~~g~iV~isS~~~~~~~~~~~~  180 (276)
T 2b4q_A          104 ARLDILVNNAGTSWGA--ALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSA-SAENPARVINIGSVAGISAMGEQAY  180 (276)
T ss_dssp             SCCSEEEECCCCCCCC--CTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-CSSSCEEEEEECCGGGTCCCCCSCT
T ss_pred             CCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcc-CCCCCCEEEEECCHHHcCCCCCCcc
Confidence            9999999999987654  788899999999999999999999999999998765 4    8999999999998888888 


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC--CCCCCCCCCChHHHHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP--QTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~edva~~~~~l  242 (264)
                      .|++||++++.|++.++.|++++||+||+|+||+++|++.......    ....+..  ..|. +++.+|||+|++++||
T Consensus       181 ~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~----~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l  255 (276)
T 2b4q_A          181 AYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIAND----PQALEADSASIPM-GRWGRPEEMAALAISL  255 (276)
T ss_dssp             THHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHC----HHHHHHHHHTSTT-SSCCCHHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchh----HHHHHHhhcCCCC-CCcCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999986532111    1111222  3455 7899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++..++++|++|.+|||+.|
T Consensus       256 ~s~~~~~~tG~~i~vdGG~~L  276 (276)
T 2b4q_A          256 AGTAGAYMTGNVIPIDGGFHL  276 (276)
T ss_dssp             HSGGGTTCCSCEEEESTTTTC
T ss_pred             hCccccCCCCCEEEeCCCccC
Confidence            998889999999999999865

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.6e-49  Score=325.90  Aligned_cols=243  Identities=26%  Similarity=0.386  Sum_probs=197.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.+++++|++|||||++|||++++++|+++|++|+++.|+.++..+.+     ..++.++++|++|.++++++++.+.+ 
T Consensus         3 ~~m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~~~~~v~~~~~~~~~-   76 (257)
T 3tl3_A            3 GSMEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADL-----GDRARFAAADVTDEAAVASALDLAET-   76 (257)
T ss_dssp             -------CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHT-----CTTEEEEECCTTCHHHHHHHHHHHHH-
T ss_pred             CcceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhc-----CCceEEEECCCCCHHHHHHHHHHHHH-
Confidence            345789999999999999999999999999999999988655443322     24689999999999999999999877 


Q ss_pred             cCCccEEEEcCCCCCCCC--CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHc--------CCCCcEEEEecCCCCCC
Q 041914           89 YGQLDIMFSNAGILSSSD--QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVE--------GGVRGSIVCTASVAGSC  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~--------~~~~~~iv~iss~~~~~  158 (264)
                      ++++|+||||||+.....  .+..+.+.++|++.+++|+.+++++++.++|+|.+        ++ .|+||++||..+..
T Consensus        77 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~  155 (257)
T 3tl3_A           77 MGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEE-RGVIINTASVAAFD  155 (257)
T ss_dssp             HSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCC-SEEEEEECCCC--C
T ss_pred             hCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCC-CcEEEEEcchhhcC
Confidence            899999999999864321  12235899999999999999999999999999987        44 78999999999999


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      +.+++..|++||+|+++|++.++.|++++||+||+|+||+++|++....   . ++....+....|..+++.+|||+|++
T Consensus       156 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~---~-~~~~~~~~~~~~~~~r~~~p~dva~~  231 (257)
T 3tl3_A          156 GQIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASL---P-EEARASLGKQVPHPSRLGNPDEYGAL  231 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------C-HHHHHHHHHTSSSSCSCBCHHHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhc---c-HHHHHHHHhcCCCCCCccCHHHHHHH
Confidence            9999999999999999999999999999999999999999999987643   1 23333333445554789999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeecC
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++||+++  .++||++|.+|||+.+.
T Consensus       232 v~~l~s~--~~itG~~i~vdGG~~~~  255 (257)
T 3tl3_A          232 AVHIIEN--PMLNGEVIRLDGAIRMA  255 (257)
T ss_dssp             HHHHHHC--TTCCSCEEEESTTC---
T ss_pred             HHHHhcC--CCCCCCEEEECCCccCC
Confidence            9999975  79999999999999863

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=100.00  E-value=5.8e-48  Score=319.18  Aligned_cols=248  Identities=26%  Similarity=0.352  Sum_probs=213.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+.+
T Consensus         5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (260)
T 2ae2_A            5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF   84 (260)
T ss_dssp             TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence            458899999999999999999999999999988888876655433332222 2468899999999999999999999999


Q ss_pred             -CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           90 -GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        90 -~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                       +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++
T Consensus        85 ~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  161 (260)
T 2ae2_A           85 HGKLNILVNNAGIVIYK--EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGA  161 (260)
T ss_dssp             TTCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhccCCCCcchHHH
Confidence             8999999999987544  788899999999999999999999999999998876 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHh---hcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK---LFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ||++++.|++.++.|++++||+||+|+||+++|++.......  +...+   .+....|. +++.+|||+|++++||+++
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l~s~  238 (260)
T 2ae2_A          162 TKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQD--PEQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCFP  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTS--HHHHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccC--hhhHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCc
Confidence            999999999999999999999999999999999987543211  11111   23334566 7899999999999999998


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      ...+++|++|.+|||+.++
T Consensus       239 ~~~~~tG~~~~vdgG~~~~  257 (260)
T 2ae2_A          239 AASYVTGQIIYVDGGLMAN  257 (260)
T ss_dssp             GGTTCCSCEEEESTTGGGC
T ss_pred             cccCCCCCEEEECCCcccc
Confidence            8899999999999998753

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=100.00  E-value=2.5e-48  Score=320.07  Aligned_cols=248  Identities=26%  Similarity=0.418  Sum_probs=177.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+
T Consensus         3 ~~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   82 (253)
T 3qiv_A            3 GSMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLA   82 (253)
T ss_dssp             --CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999988888876655444333322 35788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCC-CCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           88 NYGQLDIMFSNAGILSS-SDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~-~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      .++++|+||||||+... ...++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+.   ++...|
T Consensus        83 ~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~---~~~~~Y  158 (253)
T 3qiv_A           83 EFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRG-GGAIVNQSSTAAW---LYSNYY  158 (253)
T ss_dssp             HHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECC-------------
T ss_pred             HcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccc---CCCchh
Confidence            99999999999998532 123677889999999999999999999999999999877 7999999999887   456679


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||++++.|++.++.|++++||+||+|+||+++|++.....   .++..+.+....|. +++.+|+|+|++++||+++.
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~  234 (253)
T 3qiv_A          159 GLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTT---PKEMVDDIVKGLPL-SRMGTPDDLVGMCLFLLSDE  234 (253)
T ss_dssp             -CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-----------------------------------CCHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcC---cHHHHHHHhccCCC-CCCCCHHHHHHHHHHHcCcc
Confidence            999999999999999999999999999999999999875432   23333444455566 78899999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..+++|++|.+|||+.+|
T Consensus       235 ~~~~tG~~~~vdgG~~~~  252 (253)
T 3qiv_A          235 ASWITGQIFNVDGGQIIR  252 (253)
T ss_dssp             GTTCCSCEEEC-------
T ss_pred             ccCCCCCEEEECCCeecC
Confidence            999999999999999876

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=100.00  E-value=3.6e-48  Score=320.44  Aligned_cols=248  Identities=26%  Similarity=0.362  Sum_probs=208.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++++|++|+++++++++++.+
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (260)
T 2z1n_A            3 LGIQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARD   82 (260)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHH
Confidence            357899999999999999999999999999988888876554333222211   22688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++ +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+
T Consensus        83 ~~g-id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  158 (260)
T 2z1n_A           83 LGG-ADILVYSTGGPRPG--RFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKG-WGRMVYIGSVTLLRPWQDLALSN  158 (260)
T ss_dssp             TTC-CSEEEECCCCCCCB--CGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHH
T ss_pred             hcC-CCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECchhhcCCCCCCchhH
Confidence            999 99999999986544  788899999999999999999999999999998876 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC------CChHHH-HhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG------MPADEV-EKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      +||++++.|++.++.|++++||+||+|+||++.|++......      ...++. ...+....|. +++.+|||+|++++
T Consensus       159 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dva~~v~  237 (260)
T 2z1n_A          159 IMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPM-GRVGKPEELASVVA  237 (260)
T ss_dssp             HHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTT-SSCCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCC-CCccCHHHHHHHHH
Confidence            999999999999999999999999999999999998652110      001111 2223344566 78999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeec
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ||+++..++++|++|.+|||+++
T Consensus       238 ~l~s~~~~~~tG~~i~vdGG~~~  260 (260)
T 2z1n_A          238 FLASEKASFITGAVIPVDGGAHI  260 (260)
T ss_dssp             HHTSGGGTTCCSCEEEESTTTTC
T ss_pred             HHhCccccCCCCCEEEeCCCccC
Confidence            99998889999999999999864

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=8.5e-48  Score=317.49  Aligned_cols=244  Identities=31%  Similarity=0.469  Sum_probs=209.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++  +...+.+.  . .++++|++|+++++++++++.+.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~~~~--~-~~~~~D~~~~~~~~~~~~~~~~~~g   76 (256)
T 2d1y_A            2 GLFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG--KEVAEAIG--G-AFFQVDLEDERERVRFVEEAAYALG   76 (256)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH--HHHHHHHT--C-EEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH--HHHHHHhh--C-CEEEeeCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999998888887765  33333333  3 7899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||
T Consensus        77 ~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  153 (256)
T 2d1y_A           77 RVDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASK  153 (256)
T ss_dssp             CCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEccccccCCCCCChhHHHHH
Confidence            999999999987554  788899999999999999999999999999999876 79999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ++++.|++.++.|++++||++|+|+||+++|++......  ...++....+....|. +++.+|||+|+++++|+++...
T Consensus       154 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~s~~~~  232 (256)
T 2d1y_A          154 GGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKAS  232 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999998654210  0011111223334566 7899999999999999998889


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||+.+
T Consensus       233 ~~~G~~~~v~gG~~~  247 (256)
T 2d1y_A          233 FITGAILPVDGGMTA  247 (256)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCCCCEEEECCCccc
Confidence            999999999999865

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.1e-47  Score=317.95  Aligned_cols=251  Identities=30%  Similarity=0.464  Sum_probs=213.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++++|++|||||++|||++++++|+++|++|+++.|+.++..+ ..+.+.. ++.++++|++|+++++++++++.++
T Consensus         6 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~~-~~~~~~~D~~d~~~v~~~~~~~~~~   83 (263)
T 3ak4_A            6 GIFDLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQA-VVAGLEN-GGFAVEVDVTKRASVDAAMQKAIDA   83 (263)
T ss_dssp             CTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTCTT-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhc-CCeEEEEeCCCHHHHHHHHHHHHHH
Confidence            3566899999999999999999999999999998888887655433 3333322 5788999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.++...|++
T Consensus        84 ~g~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~  161 (263)
T 3ak4_A           84 LGGFDLLCANAGVSTMR--PAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSA  161 (263)
T ss_dssp             HTCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             cCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHH
Confidence            99999999999987544  7888999999999999999999999999999987543589999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      ||++++.|++.++.|++++||++|+|+||++.|++.....       ....++....+....|. +++.+|||+|++++|
T Consensus       162 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~v~~  240 (263)
T 3ak4_A          162 SKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPL-GRIEEPEDVADVVVF  240 (263)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTT-CSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            9999999999999999999999999999999999864321       01112222233334566 789999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++..++++|+.|.+|||+.++
T Consensus       241 l~s~~~~~~tG~~~~vdgG~~~~  263 (263)
T 3ak4_A          241 LASDAARFMTGQGINVTGGVRMD  263 (263)
T ss_dssp             HHSGGGTTCCSCEEEESSSSSCC
T ss_pred             HhCccccCCCCCEEEECcCEeCc
Confidence            99988899999999999998764

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=100.00  E-value=6.2e-48  Score=320.00  Aligned_cols=248  Identities=25%  Similarity=0.273  Sum_probs=214.0

Q ss_pred             cccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ++++++|++|||||+  +|||++++++|+++|++|+++.|+... .+.+.+..   ...++.++++|++|.+++++++++
T Consensus         2 ~~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~   80 (266)
T 3oig_A            2 NFSLEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERL-EKSVHELAGTLDRNDSIILPCDVTNDAEIETCFAS   80 (266)
T ss_dssp             CSCCTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHH
T ss_pred             ccccCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHH-HHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHH
Confidence            457899999999999  669999999999999998888776532 23333322   223689999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~  162 (264)
                      +.++++++|+||||||+....  ..++.+.+.++|++.+++|+.+++.+++.++|+|++   .++||++||..+..+.++
T Consensus        81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~  157 (266)
T 3oig_A           81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTE---GGSIVTLTYLGGELVMPN  157 (266)
T ss_dssp             HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTT---CEEEEEEECGGGTSCCTT
T ss_pred             HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCC---CceEEEEecccccccCCC
Confidence            999999999999999987621  237788999999999999999999999999999875   589999999999999999


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ...|++||+|+++|++.++.|++++||+||+|+||+++|++.....  ..++....+....|. +++.+|||+|++++||
T Consensus       158 ~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~-~~~~~p~dva~~v~~l  234 (266)
T 3oig_A          158 YNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGIS--DFNSILKDIEERAPL-RRTTTPEEVGDTAAFL  234 (266)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCT--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHH
T ss_pred             cchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccc--chHHHHHHHHhcCCC-CCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999876542  223444444445566 7899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++...++||+.|.+|||+.++
T Consensus       235 ~s~~~~~~tG~~i~vdGG~~~~  256 (266)
T 3oig_A          235 FSDMSRGITGENLHVDSGFHIT  256 (266)
T ss_dssp             HSGGGTTCCSCEEEESTTGGGC
T ss_pred             cCCchhcCcCCEEEECCCeEEe
Confidence            9999999999999999999763

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=100.00  E-value=5.5e-48  Score=318.24  Aligned_cols=242  Identities=35%  Similarity=0.478  Sum_probs=210.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.++..+. .+.+ ..++.++++|++|+++++++++++.+++++
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (254)
T 1hdc_A            2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAAT-AREL-GDAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTT-GGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHh-CCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            47899999999999999999999999999988888876554333 3333 236889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||+
T Consensus        80 iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~asK~  156 (254)
T 1hdc_A           80 VDGLVNNAGISTGM--FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             CCEEEECCCCCCCS--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CCEEEEECchhhccCCCCchhHHHHHH
Confidence            99999999987544  788899999999999999999999999999998876 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCC-ChHHHHHHHHHHhCCCCCCe
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL-RAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edva~~~~~l~s~~~~~~  250 (264)
                      +++.|++.++.|++++||+||+|+||++.|++......    +....+....|. +++. +|||+|+.+++|+++...++
T Consensus       157 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~----~~~~~~~~~~p~-~~~~~~~~dvA~~v~~l~s~~~~~~  231 (254)
T 1hdc_A          157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGI----RQGEGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSSYV  231 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTC----CCSTTSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccch----hHHHHHHhcCCC-CCCCCCHHHHHHHHHHHhCchhcCC
Confidence            99999999999999999999999999999998654211    111122233455 6788 99999999999999888999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.|.+|||+.+
T Consensus       232 tG~~~~vdgG~~~  244 (254)
T 1hdc_A          232 TGAELAVDGGWTT  244 (254)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCCEEEECCCccc
Confidence            9999999999865

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-47  Score=315.89  Aligned_cols=247  Identities=29%  Similarity=0.424  Sum_probs=210.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|.++++++++++.+.++++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            68999999999999999999999999988888876554333322221 24688999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++..++||++||..+..+.++...|++||+++
T Consensus        82 ~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~  159 (256)
T 1geg_A           82 VIVNNAGVAPST--PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  159 (256)
T ss_dssp             EEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHH
Confidence            999999987544  788899999999999999999999999999998754248999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|++.++.|++++||+||+|+||+++|++.....       ....++....+....|. +++.+|||+|++++||+++.
T Consensus       160 ~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s~~  238 (256)
T 1geg_A          160 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD  238 (256)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcc
Confidence            99999999999999999999999999999865321       00112222333344566 78999999999999999988


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      .++++|++|.+|||+++.
T Consensus       239 ~~~~tG~~i~vdGG~~~~  256 (256)
T 1geg_A          239 SDYMTGQSLLIDGGMVFN  256 (256)
T ss_dssp             GTTCCSCEEEESSSSSCC
T ss_pred             ccCCCCCEEEeCCCccCC
Confidence            999999999999998763

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=100.00  E-value=6.2e-48  Score=318.87  Aligned_cols=235  Identities=26%  Similarity=0.411  Sum_probs=207.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +|+++++|++|||||++|||++++++|+++|++|+++.|+.++..        ..++.++++|++|+++++++++++.++
T Consensus        22 ~m~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dv~d~~~v~~~~~~~~~~   93 (260)
T 3un1_A           22 SMMRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA--------DPDIHTVAGDISKPETADRIVREGIER   93 (260)
T ss_dssp             HHHHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS--------STTEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred             hhhCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc--------cCceEEEEccCCCHHHHHHHHHHHHHH
Confidence            466789999999999999999999999999999999888765431        126889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--CCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--GGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y  166 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..  +.++...|
T Consensus        94 ~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~~~Y  170 (260)
T 3un1_A           94 FGRIDSLVNNAGVFLAK--PFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQG-SGHIVSITTSLVDQPMVGMPSALA  170 (260)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCTTTTSCBTTCCCHHH
T ss_pred             CCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEEechhhccCCCCCccHHH
Confidence            99999999999998654  788999999999999999999999999999999887 79999999988764  44566899


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++...       +....+....|. +++.+|||+|++++||  ..
T Consensus       171 ~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~-------~~~~~~~~~~p~-~r~~~~~dva~av~~L--~~  240 (260)
T 3un1_A          171 SLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA-------ETHSTLAGLHPV-GRMGEIRDVVDAVLYL--EH  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG-------GGHHHHHTTSTT-SSCBCHHHHHHHHHHH--HH
T ss_pred             HHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH-------HHHHHHhccCCC-CCCcCHHHHHHHHHHh--cc
Confidence            9999999999999999999999999999999999998642       122333445566 8999999999999999  46


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ..+++|++|.+|||+.++
T Consensus       241 ~~~itG~~i~vdGG~~~~  258 (260)
T 3un1_A          241 AGFITGEILHVDGGQNAG  258 (260)
T ss_dssp             CTTCCSCEEEESTTGGGC
T ss_pred             cCCCCCcEEEECCCeecc
Confidence            789999999999998763

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=100.00  E-value=3.3e-48  Score=324.78  Aligned_cols=246  Identities=24%  Similarity=0.334  Sum_probs=212.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC---cEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA---RMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~---~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      +.++++|++|||||++|||+++|++|+++|+   +|+++.|+.+...+...+..   ...++.++++|++|+++++++++
T Consensus        28 ~~~l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~  107 (287)
T 3rku_A           28 AERLAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIE  107 (287)
T ss_dssp             HHHHTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHH
T ss_pred             hhhcCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHH
Confidence            5678999999999999999999999999998   88888777665543333222   23578999999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++.++++++|+||||||+.... .++.+.+.++|++++++|+.+++++++.++|+|++++ .|+||++||..+..+.++.
T Consensus       108 ~~~~~~g~iD~lVnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~  185 (287)
T 3rku_A          108 NLPQEFKDIDILVNNAGKALGS-DRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKN-SGDIVNLGSIAGRDAYPTG  185 (287)
T ss_dssp             TSCGGGCSCCEEEECCCCCCCC-CCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTC
T ss_pred             HHHHhcCCCCEEEECCCcCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEEECChhhcCCCCCC
Confidence            9999999999999999987532 3788999999999999999999999999999998877 7999999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+|+++|++.++.|++++||+||+|+||+++|++.........+.....+....|     ++|||||++++||+
T Consensus       186 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p-----~~pedvA~~v~~l~  260 (287)
T 3rku_A          186 SIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTP-----LMADDVADLIVYAT  260 (287)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCC-----EEHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCC-----CCHHHHHHHHHHHh
Confidence            9999999999999999999999999999999999999998654433333333344433333     38999999999999


Q ss_pred             CCCCCCeeccEEEecCeee
Q 041914          244 CRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++...+++|+++.+|||..
T Consensus       261 s~~~~~i~g~~i~v~~g~~  279 (287)
T 3rku_A          261 SRKQNTVIADTLIFPTNQA  279 (287)
T ss_dssp             TSCTTEEEEEEEEEETTEE
T ss_pred             CCCCCeEecceEEeeCCCC
Confidence            9999999999999999975

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=100.00  E-value=9.8e-48  Score=317.81  Aligned_cols=251  Identities=28%  Similarity=0.402  Sum_probs=212.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ...++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++++.+
T Consensus         8 ~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   87 (260)
T 2zat_A            8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVN   87 (260)
T ss_dssp             --CTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence            44568999999999999999999999999999988888876654433332222 24688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||+.... .++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+
T Consensus        88 ~~g~iD~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  165 (260)
T 2zat_A           88 LHGGVDILVSNAAVNPFF-GNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRG-GGSVLIVSSVGAYHPFPNLGPYN  165 (260)
T ss_dssp             HHSCCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHH
T ss_pred             HcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEEechhhcCCCCCchhHH
Confidence            999999999999986422 3678899999999999999999999999999998876 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||++++.|++.++.|++++||+||+|+||++.|++...... . +.....+....|. +++.+|||+|++++||+++..
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~dva~~v~~l~s~~~  242 (260)
T 2zat_A          166 VSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWM-D-KARKEYMKESLRI-RRLGNPEDCAGIVSFLCSEDA  242 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHS-S-HHHHHHHHHHHTC-SSCBCGGGGHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhccc-C-hHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCccc
Confidence            999999999999999999999999999999999998653211 1 1111222222355 788999999999999999889


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      ++++|++|.+|||+.++
T Consensus       243 ~~~tG~~~~vdgG~~~s  259 (260)
T 2zat_A          243 SYITGETVVVGGGTASR  259 (260)
T ss_dssp             TTCCSCEEEESTTCCCC
T ss_pred             CCccCCEEEECCCcccc
Confidence            99999999999998764

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=1.9e-47  Score=321.79  Aligned_cols=252  Identities=25%  Similarity=0.390  Sum_probs=213.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CC---cEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VG---KCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      |+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..   ++.++++|++|+++++++++++
T Consensus        21 m~~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~  100 (297)
T 1xhl_A           21 MARFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTT  100 (297)
T ss_dssp             --CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHH
Confidence            5568999999999999999999999999999988888876655433333222 22   6889999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-CCCc
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRT  164 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-~~~~  164 (264)
                      .++++++|+||||||+....+..+.+.+.++|++.+++|+.+++++++.++|.|.+++  |+||++||..+..+. ++..
T Consensus       101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~--g~IV~isS~~~~~~~~~~~~  178 (297)
T 1xhl_A          101 LAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK--GEIVNVSSIVAGPQAHSGYP  178 (297)
T ss_dssp             HHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT--CEEEEECCGGGSSSCCTTSH
T ss_pred             HHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC--CEEEEEcCchhccCCCCCcc
Confidence            9999999999999998765422288899999999999999999999999999998764  899999999998888 8899


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      .|++||++++.|++.++.|++++||+||+|+||+++|++........     .++....+....|. +++.+|||+|+++
T Consensus       179 ~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v  257 (297)
T 1xhl_A          179 YYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANII  257 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            99999999999999999999999999999999999999875431010     11223334444566 7899999999999


Q ss_pred             HHHhCCC-CCCeeccEEEecCeeecC
Q 041914          240 LFLACRD-SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       240 ~~l~s~~-~~~~~G~~i~~dgG~~~~  264 (264)
                      +||+++. ..+++|+.|.+|||+.++
T Consensus       258 ~~l~s~~~~~~itG~~i~vdGG~~~~  283 (297)
T 1xhl_A          258 VFLADRNLSSYIIGQSIVADGGSTLV  283 (297)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHhCCcccCCccCcEEEECCCcccc
Confidence            9999987 889999999999998763

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.3e-47  Score=318.86  Aligned_cols=249  Identities=27%  Similarity=0.405  Sum_probs=212.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-C---cEEEEEecCCCHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-G---KCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+.... .   ++.++++|++|+++++++++++.
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   81 (280)
T 1xkq_A            2 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   81 (280)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999888888766554433332221 2   68999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCC----ccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-C
Q 041914           87 QNYGQLDIMFSNAGILSSSDQT----VLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-K  161 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~----~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-~  161 (264)
                      ++++++|+||||||+....  +    +.+.+.++|++.+++|+.+++++++.++|.|.+++  ++||++||..+..+. +
T Consensus        82 ~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~  157 (280)
T 1xkq_A           82 KQFGKIDVLVNNAGAAIPD--AFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK--GEIVNVSSIVAGPQAQP  157 (280)
T ss_dssp             HHHSCCCEEEECCCCCCCC--TTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGSSSCCC
T ss_pred             HhcCCCCEEEECCCCCCCC--CCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC--CcEEEecCccccCCCCC
Confidence            9999999999999987543  4    77899999999999999999999999999998654  899999999998887 8


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                      +...|++||++++.|++.++.|++++||+||+|+||+++|++........     .++....+....|. +++.+|||+|
T Consensus       158 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~pedvA  236 (280)
T 1xkq_A          158 DFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIA  236 (280)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHH
T ss_pred             cccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCC-CCCCCHHHHH
Confidence            89999999999999999999999999999999999999999875431000     11223334444566 7899999999


Q ss_pred             HHHHHHhCCC-CCCeeccEEEecCeeecC
Q 041914          237 DAVLFLACRD-SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       237 ~~~~~l~s~~-~~~~~G~~i~~dgG~~~~  264 (264)
                      ++++||+++. ..+++|+.|.+|||+.++
T Consensus       237 ~~v~~l~s~~~~~~~tG~~i~vdgG~~~~  265 (280)
T 1xkq_A          237 NIILFLADRNLSFYILGQSIVADGGTSLV  265 (280)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHhcCcccccCccCCeEEECCCcccc
Confidence            9999999987 889999999999998763

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=100.00  E-value=1.2e-47  Score=318.47  Aligned_cols=245  Identities=22%  Similarity=0.353  Sum_probs=211.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.++.+|++|||||++|||++++++|+++|++|+++.++..+..+...+.+  ...++.++.+|++|.++++++++++.+
T Consensus        21 ~~~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~  100 (267)
T 4iiu_A           21 QSNAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIA  100 (267)
T ss_dssp             ----CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            446789999999999999999999999999998777766655444433333  235789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.+++.|.++...++||++||..+..+.++...|+
T Consensus       101 ~~g~id~li~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  178 (267)
T 4iiu_A          101 QHGAWYGVVSNAGIARDA--AFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYS  178 (267)
T ss_dssp             HHCCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHH
T ss_pred             HhCCccEEEECCCCCCCC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhH
Confidence            999999999999988654  788899999999999999999999999999987433278999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|++.|++.++.|++++||+||+|+||+++|++....     ++.........|. +++.+|||+|++++||+++..
T Consensus       179 asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-----~~~~~~~~~~~p~-~~~~~~edva~~~~~L~s~~~  252 (267)
T 4iiu_A          179 AAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEME-----ESALKEAMSMIPM-KRMGQAEEVAGLASYLMSDIA  252 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCC-----HHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCccccc-----HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCCcc
Confidence            9999999999999999999999999999999999987532     2333334445566 789999999999999999999


Q ss_pred             CCeeccEEEecCeee
Q 041914          248 EFVTGHDLVVDGGFL  262 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~  262 (264)
                      .++||++|.+|||++
T Consensus       253 ~~itG~~i~vdGG~~  267 (267)
T 4iiu_A          253 GYVTRQVISINGGML  267 (267)
T ss_dssp             TTCCSCEEEESTTCC
T ss_pred             cCccCCEEEeCCCcC
Confidence            999999999999974

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=100.00  E-value=2.2e-47  Score=314.78  Aligned_cols=246  Identities=26%  Similarity=0.401  Sum_probs=210.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.++  +...+... ..++.++++|++|+++++++++++.++++
T Consensus         1 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~--~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   78 (255)
T 2q2v_A            1 TLKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA--PALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFG   78 (255)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH--HHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH--HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            3678999999999999999999999999998888887652  11122211 24688899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+++|
T Consensus        79 ~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  155 (255)
T 2q2v_A           79 GVDILVNNAGIQHVA--PVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARN-WGRIINIASVHGLVGSTGKAAYVAAK  155 (255)
T ss_dssp             SCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcCchhccCCCCchhHHHHH
Confidence            999999999987544  788899999999999999999999999999998876 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHH-------Hhhc-CCCCCCCCCCCChHHHHHHHHHH
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV-------EKLF-EPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~-------~~~~-~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ++++.|++.++.|++++||+||+|+||++.|++....... .+..       ...+ ....|. +++.+|+|+|++++||
T Consensus       156 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l  233 (255)
T 2q2v_A          156 HGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDD-RAANGGDPLQAQHDLLAEKQPS-LAFVTPEHLGELVLFL  233 (255)
T ss_dssp             HHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHH-HHHHTCCHHHHHHHHHTTTCTT-CCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhccc-ccccccchHHHHHHHHhccCCC-CCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999986532100 0111       1222 445566 7899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++..++++|+.|.+|||++++
T Consensus       234 ~s~~~~~~tG~~~~vdgG~~~~  255 (255)
T 2q2v_A          234 CSEAGSQVRGAAWNVDGGWLAQ  255 (255)
T ss_dssp             TSGGGTTCCSCEEEESTTGGGC
T ss_pred             hCCccCCCCCCEEEECCCccCC
Confidence            9988899999999999998875

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=100.00  E-value=5e-48  Score=323.87  Aligned_cols=247  Identities=26%  Similarity=0.383  Sum_probs=203.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-----------hhhHHHHHhhh--CCCcEEEEEecCCCH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-----------DELGRQVATSI--GVGKCHYVHCDVTNE   75 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-----------~~~~~~~~~~~--~~~~~~~~~~D~s~~   75 (264)
                      +|.+++||++|||||++|||+++|++|+++|++|+++.|+.           .+..+......  ...++.++++|++|.
T Consensus         4 ~m~~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~   83 (287)
T 3pxx_A            4 SMGRVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDR   83 (287)
T ss_dssp             SCCTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCH
T ss_pred             cccccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCH
Confidence            45679999999999999999999999999999988888761           22222222222  235789999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++++++++++.++++++|+||||||+....    .+.+.++|++.+++|+.+++++++.++|+|.+   .++||++||..
T Consensus        84 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~----~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~  156 (287)
T 3pxx_A           84 AAVSRELANAVAEFGKLDVVVANAGICPLG----AHLPVQAFADAFDVDFVGVINTVHAALPYLTS---GASIITTGSVA  156 (287)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC----TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCT---TCEEEEECCHH
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCcCccc----CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhc---CcEEEEeccch
Confidence            999999999999999999999999987543    23788999999999999999999999999933   57999999998


Q ss_pred             CCCCC-----------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----------CCChHH
Q 041914          156 GSCGG-----------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----------GMPADE  214 (264)
Q Consensus       156 ~~~~~-----------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----------~~~~~~  214 (264)
                      +..+.           ++...|++||+++++|++.++.|++++||+||+|+||+++|+|.....          .....+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T 3pxx_A          157 GLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSRAD  236 (287)
T ss_dssp             HHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHH
T ss_pred             hcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccchhHH
Confidence            87554           667889999999999999999999999999999999999999875311          001111


Q ss_pred             HHhh--cCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          215 VEKL--FEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       215 ~~~~--~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ....  .....|  +++.+|||||++++||+++..+++||++|.+|||++++
T Consensus       237 ~~~~~~~~~~~~--~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~  286 (287)
T 3pxx_A          237 ALLAFPAMQAMP--TPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK  286 (287)
T ss_dssp             HHHHGGGGCSSS--CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred             HHhhhhhhcccC--CCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence            1111  222223  78999999999999999999999999999999999875

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=100.00  E-value=1.8e-47  Score=313.88  Aligned_cols=245  Identities=25%  Similarity=0.377  Sum_probs=201.0

Q ss_pred             CCCcccccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHH
Q 041914            1 MADSSMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKA   80 (264)
Q Consensus         1 ~~~~~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~   80 (264)
                      |+.........++++|++|||||++|||++++++|+++|++|+++.|+.++..          .+..+++|++|++++++
T Consensus         1 m~~~~~~~~~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~   70 (247)
T 1uzm_A            1 MTATATEGAKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK----------GLFGVEVDVTDSDAVDR   70 (247)
T ss_dssp             --------CCCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTCHHHHHH
T ss_pred             CCCcccCcccccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----------HhcCeeccCCCHHHHHH
Confidence            44444444566789999999999999999999999999999988888765431          11248899999999999


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 041914           81 LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG  160 (264)
Q Consensus        81 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~  160 (264)
                      +++++.+.++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..+.
T Consensus        71 ~~~~~~~~~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~  147 (247)
T 1uzm_A           71 AFTAVEEHQGPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGI  147 (247)
T ss_dssp             HHHHHHHHHSSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC----
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CCEEEEECCHhhccCC
Confidence            9999999999999999999987544  778899999999999999999999999999998876 7999999999999998


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      ++...|++||++++.|++.++.|++++||+||+|+||+++|++....   . +.....+....|. +++.+|||+|+.++
T Consensus       148 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~~p~-~~~~~~~dvA~~~~  222 (247)
T 1uzm_A          148 GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL---D-ERIQQGALQFIPA-KRVGTPAEVAGVVS  222 (247)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS---C-HHHHHHHGGGCTT-CSCBCHHHHHHHHH
T ss_pred             CCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhc---C-HHHHHHHHhcCCC-CCCcCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999986542   1 2222333334565 78899999999999


Q ss_pred             HHhCCCCCCeeccEEEecCeeec
Q 041914          241 FLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ||+++...+++|++|.+|||+.+
T Consensus       223 ~l~s~~~~~~~G~~i~vdgG~~~  245 (247)
T 1uzm_A          223 FLASEDASYISGAVIPVDGGMGM  245 (247)
T ss_dssp             HHHSGGGTTCCSCEEEESTTTTC
T ss_pred             HHcCccccCCcCCEEEECCCccc
Confidence            99998889999999999999865

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=100.00  E-value=9e-48  Score=319.55  Aligned_cols=249  Identities=21%  Similarity=0.249  Sum_probs=209.8

Q ss_pred             cccCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      |.++++|++|||||  ++|||++++++|+++|++|+++.|+.++..+.+.+... .++.++++|++|+++++++++++.+
T Consensus         2 m~~l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (269)
T 2h7i_A            2 TGLLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTE   80 (269)
T ss_dssp             CCTTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcC-CCceEEEccCCCHHHHHHHHHHHHH
Confidence            44688999999999  99999999999999999988888877654444444432 3578899999999999999999999


Q ss_pred             hcC---CccEEEEcCCCCCCC---CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           88 NYG---QLDIMFSNAGILSSS---DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        88 ~~~---~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      .++   ++|+||||||+....   ..++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||... .+.+
T Consensus        81 ~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~iss~~~-~~~~  156 (269)
T 2h7i_A           81 AIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNP---GGSIVGMDFDPS-RAMP  156 (269)
T ss_dssp             HHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECCCS-SCCT
T ss_pred             HhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCeEEEEcCccc-cccC
Confidence            999   999999999987521   237788999999999999999999999999999965   479999999876 6778


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChH------HHHhhcCCCCCCCC-CCCCh
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PAD------EVEKLFEPQTPLEG-VVLRA  232 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~------~~~~~~~~~~~~~~-~~~~~  232 (264)
                      .+..|++||+++++|++.++.|++++||+||+|+||+++|++.......  ..+      ...+.+....|. + ++.+|
T Consensus       157 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~rr~~~p  235 (269)
T 2h7i_A          157 AYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPI-GWNMKDA  235 (269)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTT-CCCTTCC
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCc-ccCCCCH
Confidence            8899999999999999999999999999999999999999986543211  111      111223334566 5 79999


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ||+|++++||+++..+++||++|.+|||++++
T Consensus       236 ~dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~  267 (269)
T 2h7i_A          236 TPVAKTVCALLSDWLPATTGDIIYADGGAHTQ  267 (269)
T ss_dssp             HHHHHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHHHHhCchhccCcceEEEecCCeeee
Confidence            99999999999999999999999999998763

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=100.00  E-value=3e-47  Score=318.12  Aligned_cols=248  Identities=20%  Similarity=0.234  Sum_probs=213.1

Q ss_pred             cccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      |.++++|++|||||+  +|||+++|++|+++|++|+++.|+.. +..+.+.+..  .++.++++|++|.++++++++++.
T Consensus        21 M~~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~   98 (280)
T 3nrc_A           21 MGFLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEF--NPAAVLPCDVISDQEIKDLFVELG   98 (280)
T ss_dssp             -CTTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGG--CCSEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhc--CCceEEEeecCCHHHHHHHHHHHH
Confidence            567899999999998  78999999999999999888888761 2222332222  357899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCC--CCCccC-CCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           87 QNYGQLDIMFSNAGILSSS--DQTVLD-LDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      +.++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++++++.++|.|+++  .++||++||..+..+.++.
T Consensus        99 ~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~  176 (280)
T 3nrc_A           99 KVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNR--NASMVALTYIGAEKAMPSY  176 (280)
T ss_dssp             HHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--TCEEEEEECGGGTSCCTTT
T ss_pred             HHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CCeEEEEeccccccCCCCc
Confidence            9999999999999987542  124555 8999999999999999999999999999865  5899999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||+|++.|++.++.|++++||+||+|+||+++|++.....  ..++..+.+....|. +++.+|||+|++++||+
T Consensus       177 ~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~~~~~pedvA~~v~~l~  253 (280)
T 3nrc_A          177 NTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGIS--NFKKMLDYNAMVSPL-KKNVDIMEVGNTVAFLC  253 (280)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCT--THHHHHHHHHHHSTT-CSCCCHHHHHHHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCc--chHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999976542  223444444445566 88999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeecC
Q 041914          244 CRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++..+++||++|.+|||++++
T Consensus       254 s~~~~~~tG~~i~vdgG~~~~  274 (280)
T 3nrc_A          254 SDMATGITGEVVHVDAGYHCV  274 (280)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CcccCCcCCcEEEECCCcccc
Confidence            999999999999999999864

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=100.00  E-value=1.7e-47  Score=320.31  Aligned_cols=238  Identities=24%  Similarity=0.291  Sum_probs=206.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh------hHHHHHhhh--CCCcEEEEEecCCCHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE------LGRQVATSI--GVGKCHYVHCDVTNECQVKA   80 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~------~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~   80 (264)
                      +.+++++|++|||||++|||++++++|+++|++|+++.|+.++      ..+...+.+  ...++.++++|++|++++++
T Consensus         3 ~~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   82 (285)
T 3sc4_A            3 GSMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAA   82 (285)
T ss_dssp             ---CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence            3456899999999999999999999999999999999988663      112222222  13478999999999999999


Q ss_pred             HHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 041914           81 LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG  160 (264)
Q Consensus        81 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~  160 (264)
                      +++++.++++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .++||++||..+..+.
T Consensus        83 ~~~~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~  159 (285)
T 3sc4_A           83 AVAKTVEQFGGIDICVNNASAINLG--SIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRD-NPHILTLSPPIRLEPK  159 (285)
T ss_dssp             HHHHHHHHHSCCSEEEECCCCCCCC--CTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSS-SCEEEECCCCCCCSGG
T ss_pred             HHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhccCC
Confidence            9999999999999999999998654  888999999999999999999999999999998877 7899999999998886


Q ss_pred             -CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCC-cccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          161 -KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH-GLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       161 -~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                       ++...|++||+|+++|+++++.|++++||+||+|+|| .+.|++....           .....|. +++.+|||+|++
T Consensus       160 ~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~~-----------~~~~~~~-~r~~~pedvA~~  227 (285)
T 3sc4_A          160 WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQNL-----------LGGDEAM-ARSRKPEVYADA  227 (285)
T ss_dssp             GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHHH-----------HTSCCCC-TTCBCTHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHhh-----------ccccccc-cCCCCHHHHHHH
Confidence             7889999999999999999999999999999999999 6899876432           1223344 788999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeee
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++||+++.. ++||+.|.+|||+.
T Consensus       228 ~~~l~s~~~-~~tG~~i~~dgg~~  250 (285)
T 3sc4_A          228 AYVVLNKPS-SYTGNTLLCEDVLL  250 (285)
T ss_dssp             HHHHHTSCT-TCCSCEEEHHHHHH
T ss_pred             HHHHhCCcc-cccceEEEEcCchh
Confidence            999999888 99999999999874

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=100.00  E-value=3.2e-47  Score=317.52  Aligned_cols=250  Identities=28%  Similarity=0.421  Sum_probs=213.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+.
T Consensus        17 m~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   96 (277)
T 2rhc_B           17 MATQDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVER   96 (277)
T ss_dssp             TCCTTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHH
Confidence            4468999999999999999999999999999988888876654333322221 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHH--HHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~--~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.  |++++ .++||++||..+..+.++...|
T Consensus        97 ~g~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y  173 (277)
T 2rhc_B           97 YGPVDVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPY  173 (277)
T ss_dssp             TCSCSEEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHT-EEEEEEECCGGGTSCCTTCHHH
T ss_pred             hCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcC-CeEEEEECccccccCCCCCccH
Confidence            99999999999987644  7888999999999999999999999999999  88766 6899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      ++||++++.|++.++.|+++.||+||+|+||++.|++.....       ....++....+....|. +++.+|||+|+++
T Consensus       174 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~~~dvA~~v  252 (277)
T 2rhc_B          174 SASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMV  252 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTT-SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999865321       00112222223333465 7899999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeeec
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +||+++...+++|++|.+|||+..
T Consensus       253 ~~l~s~~~~~~tG~~~~vdGG~~~  276 (277)
T 2rhc_B          253 AYLIGPGAAAVTAQALNVCGGLGN  276 (277)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHhCchhcCCCCcEEEECCCccc
Confidence            999998889999999999999864

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=100.00  E-value=3.6e-47  Score=318.14  Aligned_cols=248  Identities=29%  Similarity=0.416  Sum_probs=210.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.++..+.+.+.+  ...++.++.+|++|.++++++++++.+
T Consensus        24 ~~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~  103 (283)
T 1g0o_A           24 SASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVK  103 (283)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHH
Confidence            456889999999999999999999999999999988888765434333322  124688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC-Cchh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDY  166 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~-~~~y  166 (264)
                      .++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.  + .++||++||..+..+.++ ...|
T Consensus       104 ~~g~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~-~g~iv~isS~~~~~~~~~~~~~Y  178 (283)
T 1g0o_A          104 IFGKLDIVCSNSGVVSFG--HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLE--I-GGRLILMGSITGQAKAVPKHAVY  178 (283)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSC--T-TCEEEEECCGGGTCSSCSSCHHH
T ss_pred             HcCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHh--c-CCeEEEEechhhccCCCCCCcch
Confidence            999999999999987554  788899999999999999999999999999993  3 589999999999887664 8899


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC----CC---hHHHHhhcCC--CCCCCCCCCChHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----MP---ADEVEKLFEP--QTPLEGVVLRAGHVAD  237 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~---~~~~~~~~~~--~~~~~~~~~~~edva~  237 (264)
                      ++||++++.|++.++.|++++||+||+|+||++.|++......    ..   .++....+..  ..|. +++.+|||+|+
T Consensus       179 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~  257 (283)
T 1g0o_A          179 SGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRVGLPIDIAR  257 (283)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC-CCCcCHHHHHH
Confidence            9999999999999999999999999999999999998654310    00   1222222323  4566 78999999999


Q ss_pred             HHHHHhCCCCCCeeccEEEecCeeec
Q 041914          238 AVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       238 ~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++||+++...++||++|.+|||+++
T Consensus       258 ~v~~l~s~~~~~itG~~i~vdgG~~~  283 (283)
T 1g0o_A          258 VVCFLASNDGGWVTGKVIGIDGGACM  283 (283)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHhCccccCcCCCEEEeCCCccC
Confidence            99999999899999999999999864

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=2e-47  Score=316.33  Aligned_cols=240  Identities=32%  Similarity=0.507  Sum_probs=205.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+ ..+.+. .++.++++|++|.++++++++++.++++
T Consensus         2 ~~l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g   79 (263)
T 2a4k_A            2 GRLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAE-AVAALE-AEAIAVVADVSDPKAVEAVFAEALEEFG   79 (263)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHTCC-SSEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999998888887665433 333333 4688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.| ++  .++||++||..+. +.++...|++||
T Consensus        80 ~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~-~~--~g~iv~isS~~~~-~~~~~~~Y~asK  153 (263)
T 2a4k_A           80 RLHGVAHFAGVAHSA--LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVL-EE--GGSLVLTGSVAGL-GAFGLAHYAAGK  153 (263)
T ss_dssp             CCCEEEEGGGGTTTT--C----CHHHHHHHHHHHHHHHHHHHHHHHHHC-CT--TCEEEEECCCTTC-CHHHHHHHHHCS
T ss_pred             CCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH-hc--CCEEEEEecchhc-CCCCcHHHHHHH
Confidence            999999999987654  78889999999999999999999999999999 43  5899999999998 778889999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|++.++.|++++||+||+|+||++.|++....   . ++....+....|. +++.+|||+|+.++||+++...++
T Consensus       154 ~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~-~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s~~~~~~  228 (263)
T 2a4k_A          154 LGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---P-PWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAYI  228 (263)
T ss_dssp             SHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---C-HHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhc---C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccccCC
Confidence            9999999999999999999999999999999987542   2 2222333334566 788999999999999999889999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.|.+|||+.+
T Consensus       229 tG~~i~vdgG~~~  241 (263)
T 2a4k_A          229 TGQALYVDGGRSI  241 (263)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             cCCEEEECCCccc
Confidence            9999999999865

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=100.00  E-value=5.2e-47  Score=311.72  Aligned_cols=237  Identities=28%  Similarity=0.382  Sum_probs=194.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.+.      +  .. .+.++.+|++|+++++++++++.+++++
T Consensus         4 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~------~--~~-~~~~~~~D~~d~~~~~~~~~~~~~~~g~   74 (250)
T 2fwm_X            4 DFSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ------E--QY-PFATEVMDVADAAQVAQVCQRLLAETER   74 (250)
T ss_dssp             CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS------S--CC-SSEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh------h--cC-CceEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999998888887542      0  11 2678999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||+
T Consensus        75 id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~  151 (250)
T 2fwm_X           75 LDALVNAAGILRMG--ATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQR-GGAIVTVASDAAHTPRIGMSAYGASKA  151 (250)
T ss_dssp             CCEEEECCCCCCCC--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CCEEEECCCcCCCC--CcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCCchHHHHHH
Confidence            99999999987654  788899999999999999999999999999998876 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHh-hcCC-------CCCCCCCCCChHHHHHHHHHHh
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK-LFEP-------QTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~edva~~~~~l~  243 (264)
                      +++.|++.++.|++++||++|+|+||+++|++......  .++..+ .+..       ..|. +++.+|||+|++++||+
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~  228 (250)
T 2fwm_X          152 ALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWV--SDDAEEQRIRGFGEQFKLGIPL-GKIARPQEIANTILFLA  228 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------------------CHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCccCCEEEEEECCcccCcccccccc--ChhHHHHHHhhhhhcccccCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999998654211  111111 1211       3455 78899999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++...+++|+.|.+|||+++
T Consensus       229 s~~~~~~tG~~i~vdGG~~~  248 (250)
T 2fwm_X          229 SDLASHITLQDIVVDGGSTL  248 (250)
T ss_dssp             SGGGTTCCSCEEEESTTTTT
T ss_pred             CccccCCCCCEEEECCCccc
Confidence            98889999999999999876

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=100.00  E-value=8.2e-47  Score=316.76  Aligned_cols=248  Identities=24%  Similarity=0.350  Sum_probs=203.7

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-hhhHHHHHhhh---CCCcEEEEEecCCC----HHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-DELGRQVATSI---GVGKCHYVHCDVTN----ECQ   77 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~D~s~----~~~   77 (264)
                      ..+...++++|++|||||++|||++++++|+++|++|+++.|+. +.. +.+.+.+   ...++.++++|++|    .++
T Consensus        14 ~~~~~~~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~-~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~   92 (288)
T 2x9g_A           14 LVPRGSHMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAA-VSLADELNKERSNTAVVCQADLTNSNVLPAS   92 (288)
T ss_dssp             --------CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHH-HHHHHHHHHHSTTCEEEEECCCSCSTTHHHH
T ss_pred             cCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHH-HHHHHHHHhhcCCceEEEEeecCCccCCHHH
Confidence            34456678999999999999999999999999999999999887 443 3333322   23478999999999    999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCc-----cC-----CCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC---
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTV-----LD-----LDFSAFDRLFAINVRGMAACVKHAARVMVEGGV---  144 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~-----~~-----~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~---  144 (264)
                      ++++++++.+.++++|+||||||+....  ++     .+     .+.++|++.+++|+.+++.+++.++|.|++++.   
T Consensus        93 v~~~~~~~~~~~g~iD~lvnnAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~  170 (288)
T 2x9g_A           93 CEEIINSCFRAFGRCDVLVNNASAFYPT--PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCT  170 (288)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCC--CSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------
T ss_pred             HHHHHHHHHHhcCCCCEEEECCCCCCCC--ccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCC
Confidence            9999999999999999999999987553  55     56     888999999999999999999999999987531   


Q ss_pred             --CcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC
Q 041914          145 --RGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ  222 (264)
Q Consensus       145 --~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~  222 (264)
                        .++||++||..+..+.++...|++||+++++|++.++.|++++||+||+|+||++.|++ . .   ..+ ....+...
T Consensus       171 ~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~---~~~-~~~~~~~~  244 (288)
T 2x9g_A          171 SSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M---GEE-EKDKWRRK  244 (288)
T ss_dssp             CCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S---CHH-HHHHHHHT
T ss_pred             CCCeEEEEEecccccCCCCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c---ChH-HHHHHHhh
Confidence              47999999999999999999999999999999999999999999999999999999998 3 1   122 22223334


Q ss_pred             CCCCCCC-CChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          223 TPLEGVV-LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       223 ~~~~~~~-~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .|. +++ .+|||+|++++||+++..+++||++|.+|||+.+
T Consensus       245 ~p~-~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~  285 (288)
T 2x9g_A          245 VPL-GRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLSL  285 (288)
T ss_dssp             CTT-TSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCC-CCCCCCHHHHHHHHHHHhCccccCccCCEEEECcchhh
Confidence            566 677 8999999999999999899999999999999875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=100.00  E-value=2.2e-47  Score=317.99  Aligned_cols=234  Identities=25%  Similarity=0.322  Sum_probs=200.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh------HHHHHhhh--CCCcEEEEEecCCCHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL------GRQVATSI--GVGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      +++++|++|||||++|||+++|++|+++|++|+++.|+.++.      .+...+..  ...++.++++|++|++++++++
T Consensus         2 ~~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~   81 (274)
T 3e03_A            2 LTLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAV   81 (274)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHH
T ss_pred             CCCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence            468999999999999999999999999999999998876531      12222222  1357899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC--C
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG--G  160 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~--~  160 (264)
                      +++.++++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++++ .++||++||..+..+  .
T Consensus        82 ~~~~~~~g~iD~lvnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~  158 (274)
T 3e03_A           82 AATVDTFGGIDILVNNASAIWLR--GTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAP-NPHILTLAPPPSLNPAWW  158 (274)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCC--CGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSS-SCEEEECCCCCCCCHHHH
T ss_pred             HHHHHHcCCCCEEEECCCcccCC--CcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcC-CceEEEECChHhcCCCCC
Confidence            99999999999999999997654  788999999999999999999999999999998877 799999999999887  6


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCC-cccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH-GLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG-~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      ++...|++||+|+++|++.++.|++++||+||+|+|| .++|++.....             ..+. .+..+|||+|+++
T Consensus       159 ~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~~~-------------~~~~-~~~~~pedvA~~v  224 (274)
T 3e03_A          159 GAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINMLP-------------GVDA-AACRRPEIMADAA  224 (274)
T ss_dssp             HHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC--------------------CCCG-GGSBCTHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhhcc-------------cccc-cccCCHHHHHHHH
Confidence            7888999999999999999999999999999999999 68999863221             1122 4577999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +||+++..+++||++| +|||++
T Consensus       225 ~~l~s~~~~~itG~~i-~~~g~~  246 (274)
T 3e03_A          225 HAVLTREAAGFHGQFL-IDDEVL  246 (274)
T ss_dssp             HHHHTSCCTTCCSCEE-EHHHHH
T ss_pred             HHHhCccccccCCeEE-EcCcch
Confidence            9999999999999999 887764

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=100.00  E-value=1.6e-47  Score=318.08  Aligned_cols=250  Identities=22%  Similarity=0.258  Sum_probs=207.9

Q ss_pred             cccccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ....++++|++|||||+  +|||++++++|+++|++|+++.|+... .+.+.+.. ..+.+.++++|++|++++++++++
T Consensus         7 ~~~~~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   85 (271)
T 3ek2_A            7 HHMGFLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRF-KDRITEFAAEFGSELVFPCDVADDAQIDALFAS   85 (271)
T ss_dssp             --CCTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGG-HHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHH
T ss_pred             CCccccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhh-HHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHH
Confidence            34567899999999998  999999999999999998888887432 23333222 123578999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCC--CCccC-CCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSD--QTVLD-LDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~--~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      +.++++++|+||||||+.....  .++.+ .+.++|++.+++|+.+++++++.++|.|++   .++||++||..+..+.+
T Consensus        86 ~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~  162 (271)
T 3ek2_A           86 LKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSD---DASLLTLSYLGAERAIP  162 (271)
T ss_dssp             HHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCT
T ss_pred             HHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhcc---CceEEEEeccccccCCC
Confidence            9999999999999999876410  24555 899999999999999999999999999975   57999999999999999


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|++||+|+++|++.++.|++++||+||+|+||+++|++.....  ..+...+.+....|. +++.+|||+|+.++|
T Consensus       163 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~~~-~~~~~pedva~~i~~  239 (271)
T 3ek2_A          163 NYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIK--SFGKILDFVESNSPL-KRNVTIEQVGNAGAF  239 (271)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCH--HHHHHHHHHHHHSTT-SSCCCHHHHHHHHHH
T ss_pred             CccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhccc--chHHHHHHHHhcCCc-CCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999876432  123334444445666 789999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++..+++||++|.+|||+.++
T Consensus       240 l~s~~~~~~tG~~i~vdgG~~~~  262 (271)
T 3ek2_A          240 LLSDLASGVTAEVMHVDSGFNAV  262 (271)
T ss_dssp             HHSGGGTTCCSEEEEESTTGGGB
T ss_pred             HcCcccCCeeeeEEEECCCeeee
Confidence            99999999999999999998763

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=100.00  E-value=1.5e-46  Score=320.34  Aligned_cols=245  Identities=24%  Similarity=0.273  Sum_probs=207.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe-cCchhhHHHHHhhh---CCCcEEEEEecCCCHH---------
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIA-DIQDELGRQVATSI---GVGKCHYVHCDVTNEC---------   76 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~---------   76 (264)
                      |.++++|++|||||++|||++++++|+++|++|+++. |+.+...+ +.+.+   ...++.++++|++|.+         
T Consensus        41 m~~l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~-~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~  119 (328)
T 2qhx_A           41 MTAPTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANA-LSATLNARRPNSAITVQADLSNVATAPVSGADG  119 (328)
T ss_dssp             ----CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHH-HHHHHHHHSTTCEEEEECCCSSSCBCC------
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHH-HHHHHHhhcCCeEEEEEeeCCCchhcccccccc
Confidence            3458899999999999999999999999999988888 66554433 33332   1347899999999999         


Q ss_pred             --------HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCC--------------HHHHHHHHhhHHHHHHHHHHH
Q 041914           77 --------QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLD--------------FSAFDRLFAINVRGMAACVKH  134 (264)
Q Consensus        77 --------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~~~~~l~~~  134 (264)
                              +++++++++.+.++++|+||||||+....  ++.+.+              .++|++++++|+.+++.+++.
T Consensus       120 ~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~--~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  197 (328)
T 2qhx_A          120 SAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPT--PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKA  197 (328)
T ss_dssp             -CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CSCC-------------CHHHHHHHHHHHHHTHHHHHHHHH
T ss_pred             ccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC--ChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHH
Confidence                    99999999999999999999999987654  677778              999999999999999999999


Q ss_pred             HHHHHHcCCC-----CcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC
Q 041914          135 AARVMVEGGV-----RGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG  209 (264)
Q Consensus       135 ~l~~~~~~~~-----~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~  209 (264)
                      ++|.|.+++.     .++||++||..+..+.++...|++||++++.|++.++.|++++||+||+|+||+++|++ ...  
T Consensus       198 ~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~--  274 (328)
T 2qhx_A          198 FAHRVAGTPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP--  274 (328)
T ss_dssp             HHHHHHHSCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC--
T ss_pred             HHHHHHhcCCcCCCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc--
Confidence            9999986531     47999999999999999999999999999999999999999999999999999999998 321  


Q ss_pred             CChHHHHhhcCCCCCCCC-CCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          210 MPADEVEKLFEPQTPLEG-VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~-~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                         ++..+.+....|. + ++.+|||+|++++||+++...++||++|.+|||+.+.
T Consensus       275 ---~~~~~~~~~~~p~-~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~~  326 (328)
T 2qhx_A          275 ---PAVWEGHRSKVPL-YQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  326 (328)
T ss_dssp             ---HHHHHHHHTTCTT-TTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             ---HHHHHHHHhhCCC-CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcccC
Confidence               2333333445666 5 8999999999999999988999999999999998763

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=100.00  E-value=2.4e-47  Score=314.38  Aligned_cols=243  Identities=25%  Similarity=0.353  Sum_probs=209.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +++|++|||||++|||++++++|+++|++|+++.++..+..+...+.+ . ..++.++.+|++|.++++++++++.+.++
T Consensus         5 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   84 (255)
T 3icc_A            5 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ   84 (255)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhc
Confidence            679999999999999999999999999998887555544434333332 2 34788999999999999999999987764


Q ss_pred             ------CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           91 ------QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        91 ------~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                            ++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++   .++||++||..+..+.++..
T Consensus        85 ~~~~~~~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~~~iv~isS~~~~~~~~~~~  159 (255)
T 3icc_A           85 NRTGSTKFDILINNAGIGPGA--FIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRD---NSRIINISSAATRISLPDFI  159 (255)
T ss_dssp             HHHSSSCEEEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEECCGGGTSCCTTBH
T ss_pred             ccccCCcccEEEECCCCCCCC--ChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCC---CCEEEEeCChhhccCCCCcc
Confidence                  499999999987554  7888999999999999999999999999999954   57999999999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|++||+|+++|++.++.|++++||+||+|+||+++|++......  .+..........|. +++.+|||+|++++||++
T Consensus       160 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s  236 (255)
T 3icc_A          160 AYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLS--DPMMKQYATTISAF-NRLGEVEDIADTAAFLAS  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTT--SHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             hhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcc--cHHHHHhhhccCCc-CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999999876532  22233333444555 789999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++.++++|++|.+|||++|
T Consensus       237 ~~~~~~tG~~i~vdgG~~l  255 (255)
T 3icc_A          237 PDSRWVTGQLIDVSGGSCL  255 (255)
T ss_dssp             GGGTTCCSCEEEESSSTTC
T ss_pred             cccCCccCCEEEecCCeeC
Confidence            9999999999999999875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=100.00  E-value=6.4e-47  Score=311.70  Aligned_cols=243  Identities=28%  Similarity=0.423  Sum_probs=209.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.+ ..++.++++|++|+++++++++++.+.+++
T Consensus         3 ~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (253)
T 1hxh_A            3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQ-LAAEL-GERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHH-HHHHH-CTTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHc-CCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999999999999999999999999998888887655433 33333 346889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++  ++||++||..+..+.++...|++||+
T Consensus        81 id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~~sK~  156 (253)
T 1hxh_A           81 LNVLVNNAGILLPG--DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             CCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC--EEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC--CEEEEEcchhhcCCCCCCccHHHHHH
Confidence            99999999987544  788899999999999999999999999999998764  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcC--CceEEEeeCCcccCcccccccCCChHHHHhhcCC---CCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          172 AVIGLVRSASVQLGVH--GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP---QTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       172 al~~~~~~la~e~~~~--~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++.|++.++.|++++  ||++|+|+||++.|++.......  +.....+..   ..|. +++.+|+|+|++++||+++.
T Consensus       157 a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~  233 (253)
T 1hxh_A          157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPK--GVSKEMVLHDPKLNRA-GRAYMPERIAQLVLFLASDE  233 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCT--TCCHHHHBCBTTTBTT-CCEECHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccch--hhhHHHHhhhhccCcc-CCCCCHHHHHHHHHHHcCcc
Confidence            9999999999999988  99999999999999986542211  100110222   3455 78899999999999999988


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      .++++|+.|.+|||+..
T Consensus       234 ~~~~tG~~~~vdgG~~~  250 (253)
T 1hxh_A          234 SSVMSGSELHADNSILG  250 (253)
T ss_dssp             GTTCCSCEEEESSSCTT
T ss_pred             ccCCCCcEEEECCCccc
Confidence            99999999999999864

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=6.2e-47  Score=311.96  Aligned_cols=241  Identities=23%  Similarity=0.305  Sum_probs=203.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||++|||++++++|+++|  +.|+++.|+.++. +.+.+... .++.++++|++|.++++++++++.++++++
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~-~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   79 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPL-KKLKEKYG-DRFFYVVGDITEDSVLKQLVNAAVKGHGKI   79 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHH-HHHHHHHG-GGEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHH-HHHHHHhC-CceEEEECCCCCHHHHHHHHHHHHHhcCCc
Confidence            6999999999999999999999985  6666666765544 33433332 478999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++++  |+||++||..+..+.++...|++||++
T Consensus        80 d~lvnnAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~a  156 (254)
T 3kzv_A           80 DSLVANAGVLEPV-QNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN--GNVVFVSSDACNMYFSSWGAYGSSKAA  156 (254)
T ss_dssp             CEEEEECCCCCCC-TTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCSCCCCSSCCSHHHHHHHHH
T ss_pred             cEEEECCcccCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC--CeEEEEcCchhccCCCCcchHHHHHHH
Confidence            9999999986542 3788999999999999999999999999999998764  899999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC-
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD-  246 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~-  246 (264)
                      +++|++.++.|+  +||+||+|+||+++|+|........     .++..+.+....|. +++.+|||+|++++||+++. 
T Consensus       157 ~~~~~~~la~e~--~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~dva~~v~~L~s~~~  233 (254)
T 3kzv_A          157 LNHFAMTLANEE--RQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKEN-NQLLDSSVPATVYAKLALHGI  233 (254)
T ss_dssp             HHHHHHHHHHHC--TTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTT-C----CHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhhc--cCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhc-CCcCCcccHHHHHHHHHhhcc
Confidence            999999999998  6899999999999999986543211     23333444444566 88999999999999999988 


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      .+++||+.|.+|||.+.
T Consensus       234 ~~~itG~~i~vdg~~~~  250 (254)
T 3kzv_A          234 PDGVNGQYLSYNDPALA  250 (254)
T ss_dssp             CGGGTTCEEETTCGGGG
T ss_pred             cCCCCccEEEecCcccc
Confidence            49999999999999754

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=100.00  E-value=1.4e-47  Score=315.43  Aligned_cols=240  Identities=29%  Similarity=0.450  Sum_probs=198.9

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ......++.+|++|||||++|||++++++|+++|++|+++.|+.++..          .+.++++|++|+++++++++++
T Consensus        12 ~~~~~~~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~   81 (253)
T 2nm0_A           12 SGLVPRSHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEI   81 (253)
T ss_dssp             --------CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHH
Confidence            344566789999999999999999999999999999988888765431          2678999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      .++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...
T Consensus        82 ~~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~  158 (253)
T 2nm0_A           82 EETHGPVEVLIANAGVTKDQ--LLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAK-KGRVVLISSVVGLLGSAGQAN  158 (253)
T ss_dssp             HHHTCSCSEEEEECSCCTTT--C---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCCCCCCCHHHHHH
T ss_pred             HHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEECchhhCCCCCCcHH
Confidence            99999999999999987544  778889999999999999999999999999998866 789999999999988888899


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++|++++.|++.++.|++++||++|+|+||+++|++.....    ++..+.+....|. +++.+|||+|+.+++|+++
T Consensus       159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~----~~~~~~~~~~~p~-~~~~~p~dvA~~i~~l~s~  233 (253)
T 2nm0_A          159 YAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLT----DEQRANIVSQVPL-GRYARPEEIAATVRFLASD  233 (253)
T ss_dssp             HHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC-------------CHHHHHTTCTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcC----HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCc
Confidence            9999999999999999999999999999999999999875321    1111222334566 7889999999999999998


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ...+++|+.|.+|||+.+
T Consensus       234 ~~~~~tG~~i~vdGG~~~  251 (253)
T 2nm0_A          234 DASYITGAVIPVDGGLGM  251 (253)
T ss_dssp             GGTTCCSCEEEESTTTTC
T ss_pred             cccCCcCcEEEECCcccc
Confidence            899999999999999865

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=100.00  E-value=4.9e-47  Score=311.79  Aligned_cols=235  Identities=21%  Similarity=0.273  Sum_probs=197.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CC-CcEEEEEecCCCHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GV-GKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..   .. .++.++++|++|.++++++++++.
T Consensus         3 ~~~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~   82 (250)
T 3nyw_A            3 LEKQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIH   82 (250)
T ss_dssp             --CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHH
Confidence            46889999999999999999999999999999888887765544333322   12 578899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++|+||||||+....  ++ +.+.++|++.+++|+.+++.+++.++|+|++++ .|+||++||..+..+.++...|
T Consensus        83 ~~~g~iD~lvnnAg~~~~~--~~-~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  158 (250)
T 3nyw_A           83 QKYGAVDILVNAAAMFMDG--SL-SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQK-NGYIFNVASRAAKYGFADGGIY  158 (250)
T ss_dssp             HHHCCEEEEEECCCCCCCC--CC-SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECC-------CCTTHH
T ss_pred             HhcCCCCEEEECCCcCCCC--CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEEEEccHHhcCCCCCCcch
Confidence            9999999999999997654  55 789999999999999999999999999998877 7999999999999877779999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+|+++|++.++.|++++||+||+|+||+++|++.....            ...|. +++.+|||+|++++||+++.
T Consensus       159 ~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~------------~~~~~-~~~~~p~dva~~v~~l~s~~  225 (250)
T 3nyw_A          159 GSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG------------TPFKD-EEMIQPDDLLNTIRCLLNLS  225 (250)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT------------CCSCG-GGSBCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC------------CCccc-ccCCCHHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999999865331            12334 67889999999999999854


Q ss_pred             -CCCeeccEEEecCeee
Q 041914          247 -SEFVTGHDLVVDGGFL  262 (264)
Q Consensus       247 -~~~~~G~~i~~dgG~~  262 (264)
                       ...++|..|.+|||..
T Consensus       226 ~~~~~~~~~i~vd~~~~  242 (250)
T 3nyw_A          226 ENVCIKDIVFEMKKSII  242 (250)
T ss_dssp             TTEECCEEEEEEHHHHH
T ss_pred             CceEeeEEEEEeecccc
Confidence             5577899999999853

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=100.00  E-value=3.1e-46  Score=308.82  Aligned_cols=238  Identities=35%  Similarity=0.580  Sum_probs=209.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.+. .++.++++|++|+++++++++++.++++
T Consensus         3 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g   80 (260)
T 1nff_A            3 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA-MAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFG   80 (260)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHhh-cCceEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35789999999999999999999999999998888887655433 333332 2478899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||
T Consensus        81 ~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  157 (260)
T 1nff_A           81 GLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATK  157 (260)
T ss_dssp             CCCEEEECCCCCCCB--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEeehhhcCCCCCchhHHHHH
Confidence            999999999987654  788899999999999999999999999999998876 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|++.++.|++++||++|+|+||++.|++.. . .  .+    .+. ..|. +++.+|+|+|+++++|+++...++
T Consensus       158 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~-~--~~----~~~-~~~~-~~~~~~~dvA~~v~~l~s~~~~~~  227 (260)
T 1nff_A          158 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-W-V--PE----DIF-QTAL-GRAAEPVEVSNLVVYLASDESSYS  227 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-T-S--CT----TCS-CCSS-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-c-c--hh----hHH-hCcc-CCCCCHHHHHHHHHHHhCccccCC
Confidence            99999999999999999999999999999999864 1 1  11    111 3455 788999999999999999888999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      +|+.|.+|||+.+
T Consensus       228 ~G~~~~v~gG~~~  240 (260)
T 1nff_A          228 TGAEFVVDGGTVA  240 (260)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEECCCeec
Confidence            9999999999865

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-47  Score=314.91  Aligned_cols=246  Identities=28%  Similarity=0.477  Sum_probs=208.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.|+.+... .+.+...  .+.++++|++|+++++++++++.+++
T Consensus         4 ~~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~   80 (270)
T 1yde_A            4 GTRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGR-ALEQELP--GAVFILCDVTQEDDVKTLVSETIRRF   80 (270)
T ss_dssp             CCTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc--CCeEEEcCCCCHHHHHHHHHHHHHHc
Confidence            44688999999999999999999999999999888888765443 3333332  47889999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|+++  .++||++||..+..+.++...|++|
T Consensus        81 g~iD~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~as  157 (270)
T 1yde_A           81 GRLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVAT  157 (270)
T ss_dssp             SCCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHC--CCEEEEEcCccccCCCCCCcccHHH
Confidence            9999999999986532 378889999999999999999999999999999765  4899999999988888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      |++++.|++.++.|++++||+||+|+||++.|++.......  .............|. +++.+|+|+|+.++||+++ .
T Consensus       158 Kaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dva~~v~~L~s~-~  235 (270)
T 1yde_A          158 KGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLASE-A  235 (270)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHHH-C
T ss_pred             HHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHccc-C
Confidence            99999999999999999999999999999999986543211  111111111123466 7899999999999999997 7


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      +++||+.|.+|||+.+
T Consensus       236 ~~itG~~i~vdGG~~~  251 (270)
T 1yde_A          236 NFCTGIELLVTGGAEL  251 (270)
T ss_dssp             TTCCSCEEEESTTTTS
T ss_pred             CCcCCCEEEECCCeec
Confidence            8999999999999865

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=100.00  E-value=7.9e-47  Score=312.98  Aligned_cols=239  Identities=34%  Similarity=0.503  Sum_probs=208.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++          ..++.++++|++|.++++++++++.++++
T Consensus         4 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~----------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   73 (264)
T 2dtx_A            4 SDLRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG----------EAKYDHIECDVTNPDQVKASIDHIFKEYG   73 (264)
T ss_dssp             GGGTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC----------SCSSEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc----------CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45789999999999999999999999999999888887654          23578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||
T Consensus        74 ~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK  150 (264)
T 2dtx_A           74 SISVLVNNAGIESYG--KIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSR-DPSIVNISSVQASIITKNASAYVTSK  150 (264)
T ss_dssp             CCCEEEECCCCCCCB--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SCEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcC-CcEEEEECCchhccCCCCchhHHHHH
Confidence            999999999987654  788899999999999999999999999999998876 78999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC----CChH---HHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----MPAD---EVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ++++.|++.++.|+++. |+||+|+||+++|++......    ....   +....+....|. +++.+|+|+|++++||+
T Consensus       151 ~a~~~~~~~la~e~~~~-i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~  228 (264)
T 2dtx_A          151 HAVIGLTKSIALDYAPL-LRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPM-QRIGKPQEVASAVAFLA  228 (264)
T ss_dssp             HHHHHHHHHHHHHHTTT-SEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCC-cEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999988 999999999999998654210    0110   222222223455 78999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeecC
Q 041914          244 CRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++...+++|+.|.+|||+.++
T Consensus       229 s~~~~~~tG~~i~vdGG~~~~  249 (264)
T 2dtx_A          229 SREASFITGTCLYVDGGLSIR  249 (264)
T ss_dssp             SGGGTTCCSCEEEESTTGGGC
T ss_pred             CchhcCCCCcEEEECCCcccC
Confidence            988899999999999998763

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=100.00  E-value=2e-46  Score=312.50  Aligned_cols=240  Identities=28%  Similarity=0.417  Sum_probs=200.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec-CchhhHHHHHhhhC---CCcEEEEEecCCCH----HHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIAD-IQDELGRQVATSIG---VGKCHYVHCDVTNE----CQVKALVD   83 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~D~s~~----~~~~~~~~   83 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.| +.++. +.+.+.+.   ..++.++++|++|.    ++++++++
T Consensus         8 ~~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~   86 (276)
T 1mxh_A            8 ASECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAA-QRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIID   86 (276)
T ss_dssp             ---CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHH-HHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHH
T ss_pred             ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHH-HHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHH
Confidence            467999999999999999999999999999988888 54443 33333321   34688999999999    99999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCH-----------HHHHHHHhhHHHHHHHHHHHHHHHHHcCCCC------c
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDF-----------SAFDRLFAINVRGMAACVKHAARVMVEGGVR------G  146 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~-----------~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~------~  146 (264)
                      ++.+.++++|+||||||+....  ++.+.+.           ++|++.+++|+.+++++++.++|.|. ++ .      +
T Consensus        87 ~~~~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~-~~~~~~~g  162 (276)
T 1mxh_A           87 CSFRAFGRCDVLVNNASAYYPT--PLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQG-EG-GAWRSRNL  162 (276)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCC--CSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC---------CCCE
T ss_pred             HHHHhcCCCCEEEECCCCCCCC--CccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHh-cC-CCCCCCCc
Confidence            9999999999999999987654  6777888           99999999999999999999999997 44 4      8


Q ss_pred             EEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCC
Q 041914          147 SIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLE  226 (264)
Q Consensus       147 ~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~  226 (264)
                      +||++||..+..+.++...|++||++++.|++.++.|++++||+||+|+||++.|+ . .   .. ++....+....|. 
T Consensus       163 ~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~-~---~~-~~~~~~~~~~~p~-  235 (276)
T 1mxh_A          163 SVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P-A---MP-QETQEEYRRKVPL-  235 (276)
T ss_dssp             EEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S-S---SC-HHHHHHHHTTCTT-
T ss_pred             EEEEECchhhcCCCCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c-c---CC-HHHHHHHHhcCCC-
Confidence            99999999999999999999999999999999999999999999999999999999 2 1   12 2223333344566 


Q ss_pred             CC-CCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          227 GV-VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       227 ~~-~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++ +.+|+|+|++++||+++...+++|++|.+|||+++
T Consensus       236 ~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~~  273 (276)
T 1mxh_A          236 GQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL  273 (276)
T ss_dssp             TSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred             CCCCCCHHHHHHHHHHHhCccccCccCcEEEECCchhc
Confidence            67 89999999999999998889999999999999875

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=100.00  E-value=4.3e-47  Score=323.21  Aligned_cols=246  Identities=26%  Similarity=0.376  Sum_probs=206.5

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC----------chhhHHHHHhhhC-CCcEEEEEecCCCH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI----------QDELGRQVATSIG-VGKCHYVHCDVTNE   75 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~D~s~~   75 (264)
                      ..+|.++++|++|||||++|||+++|++|+++|++|+++.|+          .+...+...+... ..++.++.+|++|.
T Consensus        19 p~~m~~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~   98 (322)
T 3qlj_A           19 PGSMGVVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADW   98 (322)
T ss_dssp             ---CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSH
T ss_pred             CchhcccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCH
Confidence            445677999999999999999999999999999998888776          3333232222222 34788999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-----CCcEEEE
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-----VRGSIVC  150 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-----~~~~iv~  150 (264)
                      ++++++++++.++++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|.+.+     ..|+||+
T Consensus        99 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~  176 (322)
T 3qlj_A           99 DQAAGLIQTAVETFGGLDVLVNNAGIVRDR--MIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIIN  176 (322)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEECCCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEE
T ss_pred             HHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEE
Confidence            999999999999999999999999998664  788999999999999999999999999999997532     1379999


Q ss_pred             ecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCC
Q 041914          151 TASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL  230 (264)
Q Consensus       151 iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (264)
                      +||..+..+.++...|++||+|+++|++.++.|++++||+||+|+|| +.|+|..........       ...+. .+..
T Consensus       177 isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~~-------~~~~~-~~~~  247 (322)
T 3qlj_A          177 TSSGAGLQGSVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMMA-------TQDQD-FDAM  247 (322)
T ss_dssp             ECCHHHHHCBTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC----------------CCTT
T ss_pred             EcCHHHccCCCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhhh-------ccccc-cCCC
Confidence            99999999999999999999999999999999999999999999999 999987654321111       01111 3457


Q ss_pred             ChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +|||+|++++||+++...++||++|.+|||+.+
T Consensus       248 ~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~  280 (322)
T 3qlj_A          248 APENVSPLVVWLGSAEARDVTGKVFEVEGGKIR  280 (322)
T ss_dssp             CGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEE
T ss_pred             CHHHHHHHHHHHhCccccCCCCCEEEECCCccc
Confidence            999999999999999999999999999999865

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-46  Score=308.57  Aligned_cols=241  Identities=32%  Similarity=0.467  Sum_probs=203.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+ +. ..  .++.++++|++|+++++    ++.+.++
T Consensus         2 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~-~~--~~~~~~~~D~~~~~~~~----~~~~~~~   73 (246)
T 2ag5_A            2 GRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQE-LE-KY--PGIQTRVLDVTKKKQID----QFANEVE   73 (246)
T ss_dssp             CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGG-GG-GS--TTEEEEECCTTCHHHHH----HHHHHCS
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH-hc--cCceEEEeeCCCHHHHH----HHHHHhC
Confidence            35789999999999999999999999999998888887544322 22 11  26889999999999988    4445678


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC-CCchhhch
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RRTDYHMS  169 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~-~~~~y~~s  169 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.+ +...|++|
T Consensus        74 ~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~Y~~s  150 (246)
T 2ag5_A           74 RLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYSTT  150 (246)
T ss_dssp             CCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHHH
T ss_pred             CCCEEEECCccCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CceEEEEechHhCcCCCCCCccHHHH
Confidence            999999999987654  788899999999999999999999999999998876 78999999999988877 88999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      |++++.|++.++.|++++||++|+|+||++.|++.....  ....++....+....|. +++.+|||+|++++||+++..
T Consensus       151 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v~~l~s~~~  229 (246)
T 2ag5_A          151 KAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDES  229 (246)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999865321  11112222333334565 788999999999999999989


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      .+++|+.|.+|||+++
T Consensus       230 ~~~tG~~i~vdgG~~~  245 (246)
T 2ag5_A          230 AYVTGNPVIIDGGWSL  245 (246)
T ss_dssp             TTCCSCEEEECTTGGG
T ss_pred             cCCCCCEEEECCCccC
Confidence            9999999999999865

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.8e-46  Score=319.50  Aligned_cols=238  Identities=23%  Similarity=0.270  Sum_probs=206.7

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh------HHHHHhhh--CCCcEEEEEecCCCHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL------GRQVATSI--GVGKCHYVHCDVTNECQ   77 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~------~~~~~~~~--~~~~~~~~~~D~s~~~~   77 (264)
                      |...+.+|+||++|||||++|||++++++|+++|++|+++.|+.++.      .+...+.+  ...++.++.+|++|+++
T Consensus        36 m~~~~~~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~  115 (346)
T 3kvo_A           36 MLPNTGRLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQ  115 (346)
T ss_dssp             CCCCCSTTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHH
T ss_pred             cCccCCCCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHH
Confidence            34456789999999999999999999999999999999999887642      11222222  23578999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS  157 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~  157 (264)
                      ++++++++.++++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++++ .++||++||..+.
T Consensus       116 v~~~~~~~~~~~g~iDilVnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~g~IV~iSS~~~~  192 (346)
T 3kvo_A          116 ISAAVEKAIKKFGGIDILVNNASAISLT--NTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSK-VAHILNISPPLNL  192 (346)
T ss_dssp             HHHHHHHHHHHHSCCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCS-SCEEEEECCCCCC
T ss_pred             HHHHHHHHHHHcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CCEEEEECCHHHc
Confidence            9999999999999999999999988654  788999999999999999999999999999999877 7999999999998


Q ss_pred             CC--CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCc-ccCcccccccCCChHHHHhhcCCCCCCCCCCCChHH
Q 041914          158 CG--GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG-LATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGH  234 (264)
Q Consensus       158 ~~--~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~-v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ed  234 (264)
                      .+  .++...|++||+++++|++.++.|++ .||+||+|+||+ ++|++....            ....+. +++.+|||
T Consensus       193 ~~~~~~~~~~Y~aSKaal~~l~~~la~e~~-~gIrvn~v~PG~~i~T~~~~~~------------~~~~~~-~r~~~ped  258 (346)
T 3kvo_A          193 NPVWFKQHCAYTIAKYGMSMYVLGMAEEFK-GEIAVNALWPKTAIHTAAMDML------------GGPGIE-SQCRKVDI  258 (346)
T ss_dssp             CGGGTSSSHHHHHHHHHHHHHHHHHHHHTT-TTCEEEEEECSBCBCCHHHHHH------------CC--CG-GGCBCTHH
T ss_pred             CCCCCCCchHHHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCccccHHHHhh------------cccccc-ccCCCHHH
Confidence            87  78899999999999999999999999 899999999995 899875422            222334 77889999


Q ss_pred             HHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          235 VADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       235 va~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +|++++||+++ .+++||++| +|||++
T Consensus       259 vA~~v~~L~s~-~~~itG~~i-vdgg~~  284 (346)
T 3kvo_A          259 IADAAYSIFQK-PKSFTGNFV-IDENIL  284 (346)
T ss_dssp             HHHHHHHHHTS-CTTCCSCEE-EHHHHH
T ss_pred             HHHHHHHHHhc-CCCCCceEE-ECCcEe
Confidence            99999999998 999999998 999965

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=100.00  E-value=4.2e-46  Score=308.26  Aligned_cols=240  Identities=22%  Similarity=0.293  Sum_probs=195.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +.+|++|||||++|||+++|++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++++.+++++
T Consensus         2 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   81 (264)
T 3tfo_A            2 VMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR   81 (264)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999988888876655443333322 347889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .|+||++||..+..+.++...|++||+
T Consensus        82 iD~lVnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~g~IV~isS~~~~~~~~~~~~Y~asKa  158 (264)
T 3tfo_A           82 IDVLVNNAGVMPLS--PLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQR-SGQIINIGSIGALSVVPTAAVYCATKF  158 (264)
T ss_dssp             CCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CeEEEEEcCHHHcccCCCChhHHHHHH
Confidence            99999999987654  888999999999999999999999999999998877 799999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      |+++|+++++.|+ + ||+||+|+||+++|++.......   ......   ........+|||+|++++||+++...+.+
T Consensus       159 al~~l~~~la~e~-~-gIrvn~v~PG~v~T~~~~~~~~~---~~~~~~---~~~~~~~~~pedvA~~v~~l~s~~~~~~~  230 (264)
T 3tfo_A          159 AVRAISDGLRQES-T-NIRVTCVNPGVVESELAGTITHE---ETMAAM---DTYRAIALQPADIARAVRQVIEAPQSVDT  230 (264)
T ss_dssp             HHHHHHHHHHHHC-S-SEEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHHSCTTEEE
T ss_pred             HHHHHHHHHHHhC-C-CCEEEEEecCCCcCcccccccch---hHHHHH---HhhhccCCCHHHHHHHHHHHhcCCccCcc
Confidence            9999999999998 4 99999999999999987644211   111110   01113356999999999999999999999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |+.+..++|..+
T Consensus       231 ~~i~i~p~~~~~  242 (264)
T 3tfo_A          231 TEITIRPTASGN  242 (264)
T ss_dssp             EEEEEEECC---
T ss_pred             ceEEEecCcccc
Confidence            999999988754

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=100.00  E-value=4e-46  Score=304.48  Aligned_cols=235  Identities=26%  Similarity=0.415  Sum_probs=205.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.++..+    ..   .+.++++|++| ++++++++++.+.++++|+
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~----~~---~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~   73 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQ----SL---GAVPLPTDLEK-DDPKGLVKRALEALGGLHV   73 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHH----HH---TCEEEECCTTT-SCHHHHHHHHHHHHTSCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH----hh---CcEEEecCCch-HHHHHHHHHHHHHcCCCCE
Confidence            6899999999999999999999999999999888765322    22   26789999999 9999999999999999999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--CCCchhhchHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--KRRTDYHMSKHA  172 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--~~~~~y~~sK~a  172 (264)
                      ||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.  ++...|++||++
T Consensus        74 lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a  150 (239)
T 2ekp_A           74 LVHAAAVNVRK--PALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAG-WGRVLFIGSVTTFTAGGPVPIPAYTTAKTA  150 (239)
T ss_dssp             EEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTSCCHHHHHHHHH
T ss_pred             EEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECchhhccCCCCCCCccHHHHHHH
Confidence            99999987644  788899999999999999999999999999998876 7899999999998877  889999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      ++.|++.++.|++++||++|+|+||++.|++......  .++....+....|. +++.+|||+|+.++||+++..++++|
T Consensus       151 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~~~~~~tG  227 (239)
T 2ekp_A          151 LLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQ--NPELYEPITARIPM-GRWARPEEIARVAAVLCGDEAEYLTG  227 (239)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHT--CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGGGTTCCS
T ss_pred             HHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhcccc--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhcCCCC
Confidence            9999999999999999999999999999998654311  12223333445566 78999999999999999988899999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      +.|.+|||+++
T Consensus       228 ~~~~vdgG~~~  238 (239)
T 2ekp_A          228 QAVAVDGGFLA  238 (239)
T ss_dssp             CEEEESTTTTT
T ss_pred             CEEEECCCccc
Confidence            99999999864

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=100.00  E-value=3.9e-47  Score=311.36  Aligned_cols=235  Identities=26%  Similarity=0.371  Sum_probs=203.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITGGASGIGETTARLFAD-HGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .++|++|||||++|||++++++|++ .|+.|+++.++.+..         ...+.++++|++|+++++++++.+.  +++
T Consensus         2 ~~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~--~~~   70 (244)
T 4e4y_A            2 NAMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIK--NVS   70 (244)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTT--TCC
T ss_pred             CCCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHH--hCC
Confidence            4679999999999999999999999 788877776654411         1257899999999999999996554  679


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++   .++||++||..+..+.++...|++||+
T Consensus        71 id~lv~nAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~asKa  145 (244)
T 4e4y_A           71 FDGIFLNAGILIKG--SIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKV---GASIVFNGSDQCFIAKPNSFAYTLSKG  145 (244)
T ss_dssp             EEEEEECCCCCCCB--CTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEE---EEEEEEECCGGGTCCCTTBHHHHHHHH
T ss_pred             CCEEEECCccCCCC--CcccCCHHHHHHHHHHccHHHHHHHHHHHHHhcc---CcEEEEECCHHHccCCCCCchhHHHHH
Confidence            99999999997664  7889999999999999999999999999999976   379999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ++++|++.++.|++++||+||+|+||+++|++......       ...++.........|. +++.+|||+|++++||++
T Consensus       146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~p~dvA~~v~~l~s  224 (244)
T 4e4y_A          146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPL-NRIAQPQEIAELVIFLLS  224 (244)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCC-CCCcCHHHHHHHHHHHhc
Confidence            99999999999999999999999999999998754321       1122244445556677 889999999999999999


Q ss_pred             CCCCCeeccEEEecCeeecC
Q 041914          245 RDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +...++||++|.+|||++++
T Consensus       225 ~~~~~itG~~i~vdGG~~~~  244 (244)
T 4e4y_A          225 DKSKFMTGGLIPIDGGYTAQ  244 (244)
T ss_dssp             GGGTTCCSCEEEESTTGGGC
T ss_pred             CccccccCCeEeECCCccCC
Confidence            99999999999999999875

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=100.00  E-value=4.3e-46  Score=306.55  Aligned_cols=238  Identities=18%  Similarity=0.184  Sum_probs=190.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+.
T Consensus         2 ~~~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   81 (252)
T 3h7a_A            2 SLTPRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH   81 (252)
T ss_dssp             ---CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh
Confidence            3568899999999999999999999999999998888877765444333322 347899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                       +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .|+||++||..+..+.++...|++
T Consensus        82 -g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  157 (252)
T 3h7a_A           82 -APLEVTIFNVGANVNF--PILETTDRVFRKVWEMACWAGFVSGRESARLMLAHG-QGKIFFTGATASLRGGSGFAAFAS  157 (252)
T ss_dssp             -SCEEEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTCCCTTCHHHHH
T ss_pred             -CCceEEEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEECCHHHcCCCCCCccHHH
Confidence             9999999999998754  888999999999999999999999999999999877 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceE-EEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRV-NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v-~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ||+|+++|++.++.|++++||+| |+|+||+++|++......    +....+....|. + +.+|||+|++++||+++..
T Consensus       158 sKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~----~~~~~~~~~~~~-~-~~~pedvA~~~~~l~s~~~  231 (252)
T 3h7a_A          158 AKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERRE----QMFGKDALANPD-L-LMPPAAVAGAYWQLYQQPK  231 (252)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEEC---------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred             HHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccch----hhhhhhhhcCCc-c-CCCHHHHHHHHHHHHhCch
Confidence            99999999999999999999999 999999999999865421    222223333454 4 8899999999999999888


Q ss_pred             CCeeccEEEe
Q 041914          248 EFVTGHDLVV  257 (264)
Q Consensus       248 ~~~~G~~i~~  257 (264)
                      ...+|+...-
T Consensus       232 ~~~~~~i~~~  241 (252)
T 3h7a_A          232 SAWTFEMEIR  241 (252)
T ss_dssp             GGBCSEEEEB
T ss_pred             hcceeeEEee
Confidence            8889986543

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-46  Score=311.87  Aligned_cols=249  Identities=29%  Similarity=0.409  Sum_probs=199.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh---hC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS---IG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+.   .. ..++.++++|++|+++++++++++.
T Consensus         2 ~~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~   81 (278)
T 1spx_A            2 TRFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTL   81 (278)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHH
Confidence            3578999999999999999999999999999888888766554333222   11 2468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCC----CHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC-CCCCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDL----DFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG-SCGGK  161 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~-~~~~~  161 (264)
                      ++++++|+||||||+....  ++.+.    +.++|++.+++|+.+++++++.++|.|++++  ++||++||..+ ..+.+
T Consensus        82 ~~~g~id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~  157 (278)
T 1spx_A           82 GKFGKLDILVNNAGAAIPD--SQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATP  157 (278)
T ss_dssp             HHHSCCCEEEECCC---------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCT
T ss_pred             HHcCCCCEEEECCCCCCCc--ccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEecccccccCCC
Confidence            9999999999999987554  66677    9999999999999999999999999998754  89999999998 88889


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHH-----HHhhcCCCCCCCCCCCChHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE-----VEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~edva  236 (264)
                      +...|++||++++.|++.++.|++++||++|+|+||++.|++...........     ....+....|. +++.+|+|+|
T Consensus       158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA  236 (278)
T 1spx_A          158 DFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIA  236 (278)
T ss_dssp             TSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSCBCHHHHH
T ss_pred             CccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC-cCCCCHHHHH
Confidence            99999999999999999999999999999999999999999865321100000     01222223455 7899999999


Q ss_pred             HHHHHHhCCCCCC-eeccEEEecCeeecC
Q 041914          237 DAVLFLACRDSEF-VTGHDLVVDGGFLIR  264 (264)
Q Consensus       237 ~~~~~l~s~~~~~-~~G~~i~~dgG~~~~  264 (264)
                      ++++||+++...+ ++|+.|.+|||+.++
T Consensus       237 ~~v~~l~s~~~~~~~tG~~~~vdgG~~~~  265 (278)
T 1spx_A          237 EVIAFLADRKTSSYIIGHQLVVDGGSSLI  265 (278)
T ss_dssp             HHHHHHHCHHHHTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHcCccccCcccCcEEEECCCcccc
Confidence            9999999877776 999999999998653

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=100.00  E-value=3e-45  Score=305.54  Aligned_cols=254  Identities=44%  Similarity=0.687  Sum_probs=212.1

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      +.....++++|++|||||++|||++++++|+++|++|+++.|+.+... .+.+.+.. +++.++++|++|++++++++++
T Consensus         7 ~~~~~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~   85 (278)
T 2bgk_A            7 PDSSTNRLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQ-KVCNNIGSPDVISFVHCDVTKDEDVRNLVDT   85 (278)
T ss_dssp             ----CCTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHCCTTTEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCcccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHH-HHHHHhCCCCceEEEECCCCCHHHHHHHHHH
Confidence            344556789999999999999999999999999999888877655443 33333322 3789999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC-CC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RR  163 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~-~~  163 (264)
                      +.++++++|+||||||+......++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.+ +.
T Consensus        86 ~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~  164 (278)
T 2bgk_A           86 TIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVS  164 (278)
T ss_dssp             HHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSC
T ss_pred             HHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcC-CCeEEEEeeccccCCCCCCC
Confidence            99999999999999998754334778899999999999999999999999999998876 78999999999988877 78


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC--CCCCCCCCCCChHHHHHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~edva~~~~~  241 (264)
                      ..|+++|++++.|++.++.|++++||++++|+||++.|++......... .....+.  ...+. +++.+|+|+|+++++
T Consensus       165 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  242 (278)
T 2bgk_A          165 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDS-SRVEELAHQAANLK-GTLLRAEDVADAVAY  242 (278)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCH-HHHHHHHHHTCSSC-SCCCCHHHHHHHHHH
T ss_pred             cchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccch-hHHHHhhhcccccc-cccCCHHHHHHHHHH
Confidence            8999999999999999999999999999999999999998765432222 1111111  11233 678999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeec
Q 041914          242 LACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |+++...+++|+.|.+|||+.+
T Consensus       243 l~~~~~~~~~G~~~~v~gg~~~  264 (278)
T 2bgk_A          243 LAGDESKYVSGLNLVIDGGYTR  264 (278)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGG
T ss_pred             HcCcccccCCCCEEEECCcccc
Confidence            9998888999999999999865

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=100.00  E-value=1.3e-46  Score=311.92  Aligned_cols=247  Identities=19%  Similarity=0.256  Sum_probs=206.8

Q ss_pred             cccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      |.++++|++|||||+  +|||++++++|+++|++|+++.|+. +..+.+.+... .+...++++|++|+++++++++++.
T Consensus         4 m~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~   82 (265)
T 1qsg_A            4 MGFLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELG   82 (265)
T ss_dssp             -CTTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHH
Confidence            334889999999999  9999999999999999988888876 22222222211 1234789999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCC--CCCccC-CCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           87 QNYGQLDIMFSNAGILSSS--DQTVLD-LDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~--~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++++++|+||||||+....  ..++.+ .+.++|++.+++|+.+++++++.++|.|.+   .++||++||..+..+.++.
T Consensus        83 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~  159 (265)
T 1qsg_A           83 KVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNY  159 (265)
T ss_dssp             TTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTT
T ss_pred             HHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEcchhhccCCCCc
Confidence            9999999999999986531  126677 899999999999999999999999999964   4799999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|++||++++.|++.++.|++++||+||+|+||+++|++.....  ..+.....+....|. +++.+|||+|++++||+
T Consensus       160 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~l~  236 (265)
T 1qsg_A          160 NVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK--DFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLC  236 (265)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhccc--ccHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999875431  122333333333455 78899999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++...+++|+.|.+|||+.+
T Consensus       237 s~~~~~~tG~~~~vdgG~~~  256 (265)
T 1qsg_A          237 SDLSAGISGEVVHVDGGFSI  256 (265)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhcCccCCEEEECCCcCC
Confidence            98889999999999999865

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=100.00  E-value=1.1e-45  Score=308.76  Aligned_cols=246  Identities=26%  Similarity=0.422  Sum_probs=209.0

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++.++++|++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.+ ..++.++++|++|.++++++++++ ++
T Consensus        24 ~~~~l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~-~~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~-~~  100 (281)
T 3ppi_A           24 TIKQFEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKA-LADEL-GNRAEFVSTNVTSEDSVLAAIEAA-NQ  100 (281)
T ss_dssp             CCGGGTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHH-CTTEEEEECCTTCHHHHHHHHHHH-TT
T ss_pred             hhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHH-HHHHh-CCceEEEEcCCCCHHHHHHHHHHH-HH
Confidence            3567999999999999999999999999999998888887665544 33333 347899999999999999999999 88


Q ss_pred             cCCccEEEEc-CCCCCCCC---CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHc------CCCCcEEEEecCCCCCC
Q 041914           89 YGQLDIMFSN-AGILSSSD---QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVE------GGVRGSIVCTASVAGSC  158 (264)
Q Consensus        89 ~~~id~lv~~-ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~------~~~~~~iv~iss~~~~~  158 (264)
                      ++++|++||| +|......   ....+.+.++|++.+++|+.+++++++.++|.|.+      ++ .++||++||..+..
T Consensus       101 ~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~  179 (281)
T 3ppi_A          101 LGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGE-RGALVLTASIAGYE  179 (281)
T ss_dssp             SSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSC-CEEEEEECCGGGTS
T ss_pred             hCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCC-CeEEEEEecccccC
Confidence            8999999999 55443321   01146899999999999999999999999999986      34 68999999999999


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      +.++...|++||+|+++|++.++.|++++||+||+|+||+++|++....   . ++....+....|..+++.+|||+|++
T Consensus       180 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~-~~~~~~~~~~~~~~~~~~~pedvA~~  255 (281)
T 3ppi_A          180 GQIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESV---G-EEALAKFAANIPFPKRLGTPDEFADA  255 (281)
T ss_dssp             CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTT---C-HHHHHHHHHTCCSSSSCBCHHHHHHH
T ss_pred             CCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcc---c-HHHHHHHHhcCCCCCCCCCHHHHHHH
Confidence            9999999999999999999999999999999999999999999987653   2 23333344445554789999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeecC
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++||+++  .+++|++|.+|||+.++
T Consensus       256 v~~l~s~--~~~tG~~i~vdGG~~~~  279 (281)
T 3ppi_A          256 AAFLLTN--GYINGEVMRLDGAQRFT  279 (281)
T ss_dssp             HHHHHHC--SSCCSCEEEESTTCCCC
T ss_pred             HHHHHcC--CCcCCcEEEECCCcccC
Confidence            9999974  79999999999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=100.00  E-value=2.7e-46  Score=309.34  Aligned_cols=246  Identities=21%  Similarity=0.266  Sum_probs=207.8

Q ss_pred             ccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .++++|++|||||+  +|||++++++|+++|++|+++.|+.+ ..+.+.+... .+.+.++++|++|+++++++++++.+
T Consensus         4 ~~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   82 (261)
T 2wyu_A            4 VDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKE   82 (261)
T ss_dssp             ECCTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cCCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHH
Confidence            45789999999999  99999999999999999888888764 2222222211 12478899999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           88 NYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      +++++|+||||||+....  ..++.+.+.++|++.+++|+.+++++++.++|.|++   .++||++||..+..+.++...
T Consensus        83 ~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~  159 (261)
T 2wyu_A           83 AFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKYNV  159 (261)
T ss_dssp             HHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTCHH
T ss_pred             HcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhcc---CCEEEEEecccccCCCCCchH
Confidence            999999999999986530  126778999999999999999999999999999864   479999999999999899999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||++++.|++.++.|++++||+||+|+||+++|++.....  ..++..+.+....|. +++.+|||+|++++||+++
T Consensus       160 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~p~-~~~~~~~dva~~v~~l~s~  236 (261)
T 2wyu_A          160 MAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP--GFTKMYDRVAQTAPL-RRNITQEEVGNLGLFLLSP  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCT--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhcc--ccHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHcCh
Confidence            9999999999999999999999999999999999999865431  122333333334566 7889999999999999998


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ...+++|+.|.+|||+.+
T Consensus       237 ~~~~~tG~~~~vdgG~~~  254 (261)
T 2wyu_A          237 LASGITGEVVYVDAGYHI  254 (261)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhcCCCCCEEEECCCccc
Confidence            899999999999999865

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=100.00  E-value=7.6e-46  Score=308.41  Aligned_cols=243  Identities=30%  Similarity=0.451  Sum_probs=200.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+|++|||||++|||+++|++|+++|++|+++.++..+..+.+.+.+.  ..++.++.+|++|.++++++++++.+.+++
T Consensus        25 ~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  104 (272)
T 4e3z_A           25 DTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGR  104 (272)
T ss_dssp             CSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            579999999999999999999999999987876665555444444332  357899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC--CCCcEEEEecCCCCCCCCC-CCchhhc
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGSCGGK-RRTDYHM  168 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~--~~~~~iv~iss~~~~~~~~-~~~~y~~  168 (264)
                      +|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|.|.+.  +..++||++||..+..+.+ .+..|++
T Consensus       105 id~li~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~a  183 (272)
T 4e3z_A          105 LDGLVNNAGIVDYP-QRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAA  183 (272)
T ss_dssp             CCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHH
T ss_pred             CCEEEECCCCCCCC-CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHH
Confidence            99999999987642 378889999999999999999999999999999763  2268999999999887766 6788999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ||+|++.|++.++.|++++||+|++|+||+++|++....   ..++....+....|. +++.+|||+|++++||+++...
T Consensus       184 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~~~~-~~~~~~edvA~~i~~l~s~~~~  259 (272)
T 4e3z_A          184 SKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG---GLPDRAREMAPSVPM-QRAGMPEEVADAILYLLSPSAS  259 (272)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC---------------------CCTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc---CChHHHHHHhhcCCc-CCCcCHHHHHHHHHHHhCCccc
Confidence            999999999999999999999999999999999987542   122333334455566 7889999999999999999999


Q ss_pred             CeeccEEEecCee
Q 041914          249 FVTGHDLVVDGGF  261 (264)
Q Consensus       249 ~~~G~~i~~dgG~  261 (264)
                      +++|++|.+|||+
T Consensus       260 ~~tG~~i~vdgG~  272 (272)
T 4e3z_A          260 YVTGSILNVSGGR  272 (272)
T ss_dssp             TCCSCEEEESTTC
T ss_pred             cccCCEEeecCCC
Confidence            9999999999995

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=100.00  E-value=4.6e-46  Score=308.60  Aligned_cols=249  Identities=23%  Similarity=0.351  Sum_probs=204.9

Q ss_pred             CCCccccc-ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHH
Q 041914            1 MADSSMCN-AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVK   79 (264)
Q Consensus         1 ~~~~~~~~-~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~   79 (264)
                      |++++... +..++.+|++|||||++|||++++++|+++|++|+++.|+.++..+     .....+.++++|++|.++++
T Consensus         1 M~s~~~~~~m~~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dv~d~~~v~   75 (266)
T 3p19_A            1 MASMTGGQQMGRGSMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKA-----LNLPNTLCAQVDVTDKYTFD   75 (266)
T ss_dssp             --------------CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHT-----TCCTTEEEEECCTTCHHHHH
T ss_pred             CCcccCCccCCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-----hhcCCceEEEecCCCHHHHH
Confidence            55544333 3445889999999999999999999999999999888887554321     12236889999999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 041914           80 ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG  159 (264)
Q Consensus        80 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~  159 (264)
                      ++++++.+.++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|++++ .|+||++||..+..+
T Consensus        76 ~~~~~~~~~~g~iD~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~-~g~IV~isS~~~~~~  152 (266)
T 3p19_A           76 TAITRAEKIYGPADAIVNNAGMMLLG--QIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARN-CGTIINISSIAGKKT  152 (266)
T ss_dssp             HHHHHHHHHHCSEEEEEECCCCCCCC--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSC
T ss_pred             HHHHHHHHHCCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhCCC
Confidence            99999999999999999999987654  788999999999999999999999999999999877 799999999999999


Q ss_pred             CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC-CCCCCCCCCChHHHHHH
Q 041914          160 GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP-QTPLEGVVLRAGHVADA  238 (264)
Q Consensus       160 ~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~edva~~  238 (264)
                      .++...|++||+++++|++.++.|++++||+||+|+||+++|++......   ......+.. ..|. +++.+|||||++
T Consensus       153 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~-~r~~~pedvA~a  228 (266)
T 3p19_A          153 FPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTS---QQIKDGYDAWRVDM-GGVLAADDVARA  228 (266)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSC---HHHHHHHHHHHHHT-TCCBCHHHHHHH
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccc---hhhhHHHHhhcccc-cCCCCHHHHHHH
Confidence            99999999999999999999999999999999999999999999865432   111111111 1244 788999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCee
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ++||+++......++.+....+.
T Consensus       229 v~~l~~~~~~~~~~~i~i~p~~~  251 (266)
T 3p19_A          229 VLFAYQQPQNVCIREIALAPTKQ  251 (266)
T ss_dssp             HHHHHHSCTTEEEEEEEEEETTC
T ss_pred             HHHHHcCCCCccceeeEEecCCC
Confidence            99999998888898887766543

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=100.00  E-value=4e-45  Score=300.39  Aligned_cols=248  Identities=29%  Similarity=0.460  Sum_probs=213.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+.....++.++.+|++|+++++++++++.+.++
T Consensus         2 ~~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   81 (251)
T 1zk4_A            2 NRLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFG   81 (251)
T ss_dssp             CTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            35789999999999999999999999999998888887655433332222224789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++..++||++||..+..+.++...|+++|
T Consensus        82 ~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK  159 (251)
T 1zk4_A           82 PVSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASK  159 (251)
T ss_dssp             SCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--ChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHH
Confidence            999999999987554  778899999999999999999999999999998876228999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          171 HAVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       171 ~al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ++++.|++.++.|++  +.||++++|+||++.|++....   ........+....|. +++.+|+|+|+++++|+++...
T Consensus       160 ~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  235 (251)
T 1zk4_A          160 GAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDL---PGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNESK  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTS---TTHHHHHTSTTTCTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhc---CchhhhHHHhhcCCC-CCCcCHHHHHHHHHHHcCcccc
Confidence            999999999999988  8899999999999999987643   122222333444566 7899999999999999998888


Q ss_pred             CeeccEEEecCeeecC
Q 041914          249 FVTGHDLVVDGGFLIR  264 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~~  264 (264)
                      +++|+.|.+|||+.+.
T Consensus       236 ~~~G~~~~v~gG~~~~  251 (251)
T 1zk4_A          236 FATGSEFVVDGGYTAQ  251 (251)
T ss_dssp             TCCSCEEEESTTGGGC
T ss_pred             cccCcEEEECCCccCc
Confidence            9999999999998763

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=100.00  E-value=3.2e-46  Score=311.17  Aligned_cols=245  Identities=22%  Similarity=0.256  Sum_probs=207.9

Q ss_pred             cCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++++|++|||||+  +|||++++++|+++|++|+++.|+.+ ..+.+.+... .+.+.++++|++|+++++++++++.+.
T Consensus         3 ~l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~   81 (275)
T 2pd4_A            3 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   81 (275)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999  99999999999999999988888764 2222222211 124688999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|+||||||+....  ..++.+.+.++|++.+++|+.+++++++.++|.|++   .++||++||..+..+.++...|
T Consensus        82 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y  158 (275)
T 2pd4_A           82 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHYNVM  158 (275)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTCHHH
T ss_pred             cCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEEecchhcCCCCCchhh
Confidence            99999999999987531  136778999999999999999999999999999975   4799999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||++++.|++.++.|++++||+||+|+||+++|++.....  ..+.....+....|. +++.+|+|+|+.++||+++.
T Consensus       159 ~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~~~~~p~dva~~~~~l~s~~  235 (275)
T 2pd4_A          159 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA--DFRMILKWNEINAPL-RKNVSLEEVGNAGMYLLSSL  235 (275)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhcc--ccHHHHHHHHhcCCc-CCCCCHHHHHHHHHHHhCcc
Confidence            999999999999999999999999999999999999875431  122322333334465 78899999999999999988


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+.|.+|||+.+
T Consensus       236 ~~~~tG~~~~vdgg~~~  252 (275)
T 2pd4_A          236 SSGVSGEVHFVDAGYHV  252 (275)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCEEEECCCccc
Confidence            89999999999999864

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=100.00  E-value=3.2e-45  Score=302.71  Aligned_cols=250  Identities=27%  Similarity=0.461  Sum_probs=212.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.|+..+..+.+.+.+.  ..++.++.+|++|+++++++++++.+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (261)
T 1gee_A            2 YKDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIK   81 (261)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999988888833333333333221  24688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .++++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.++...|+
T Consensus        82 ~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~  159 (261)
T 1gee_A           82 EFGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYA  159 (261)
T ss_dssp             HHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHH
Confidence            999999999999987554  778899999999999999999999999999998754357999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||++++.|++.++.|++++||++++|+||++.|++...... . ++....+....|. +++.+|+|+|+++++|+++..
T Consensus       160 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  236 (261)
T 1gee_A          160 ASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA-D-PEQRADVESMIPM-GYIGEPEEIAAVAAWLASSEA  236 (261)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH-S-HHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhccc-C-hhHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCccc
Confidence            999999999999999999999999999999999998754311 1 2222233334565 788999999999999999888


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      .+++|++|.+|||+.++
T Consensus       237 ~~~~G~~~~v~gg~~~~  253 (261)
T 1gee_A          237 SYVTGITLFADGGMTLY  253 (261)
T ss_dssp             TTCCSCEEEESTTGGGC
T ss_pred             cCCCCcEEEEcCCcccC
Confidence            89999999999998764

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=100.00  E-value=5.4e-46  Score=305.41  Aligned_cols=241  Identities=29%  Similarity=0.494  Sum_probs=192.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ...++++|++|||||++|||++++++|+++|++|+++.|+.+...+ +.+... .++.++.+|+++.+++.+++++    
T Consensus         8 ~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~D~~~~~~~~~~~~~----   81 (249)
T 3f9i_A            8 HMIDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKS-LGNALK-DNYTIEVCNLANKEECSNLISK----   81 (249)
T ss_dssp             -CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHC-SSEEEEECCTTSHHHHHHHHHT----
T ss_pred             ccccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHH-HHHHhc-cCccEEEcCCCCHHHHHHHHHh----
Confidence            4567899999999999999999999999999998888887665433 333333 3688999999999998887764    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|++
T Consensus        82 ~~~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~  158 (249)
T 3f9i_A           82 TSNLDILVCNAGITSDT--LAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKR-YGRIINISSIVGIAGNPGQANYCA  158 (249)
T ss_dssp             CSCCSEEEECCC---------------CHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCCCC--CCSCSHHHHH
T ss_pred             cCCCCEEEECCCCCCCC--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEEEEccHHhccCCCCCchhHH
Confidence            37899999999987654  677788999999999999999999999999998877 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ||+|+++|++.++.|++++||++|+|+||++.|++.....    +.....+....|. +++.+|||+|+++++|+++...
T Consensus       159 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~s~~~~  233 (249)
T 3f9i_A          159 SKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLN----EKQREAIVQKIPL-GTYGIPEDVAYAVAFLASNNAS  233 (249)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CC----HHHHHHHHHHCTT-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccC----HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCccC
Confidence            9999999999999999999999999999999999876442    2333333344566 7899999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|++|.+|||+++
T Consensus       234 ~~tG~~~~vdgG~~~  248 (249)
T 3f9i_A          234 YITGQTLHVNGGMLM  248 (249)
T ss_dssp             TCCSCEEEESTTSSC
T ss_pred             CccCcEEEECCCEee
Confidence            999999999999876

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=100.00  E-value=1.5e-45  Score=308.63  Aligned_cols=246  Identities=24%  Similarity=0.302  Sum_probs=207.0

Q ss_pred             cCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++++|++|||||+  +|||++++++|+++|++|+++.|+.+ ..+.+.+... .+.+.++++|++|.++++++++++.++
T Consensus        18 ~l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~   96 (285)
T 2p91_A           18 LLEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEEN   96 (285)
T ss_dssp             TTTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHH
Confidence            4899999999999  99999999999999999888888764 2222222211 123678999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|+||||||+....  ..++.+.+.++|++.+++|+.+++++++.++|.|.++  .++||++||..+..+.++...|
T Consensus        97 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y  174 (285)
T 2p91_A           97 WGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGR--NGAIVTLSYYGAEKVVPHYNVM  174 (285)
T ss_dssp             TSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTS--CCEEEEEECGGGTSBCTTTTHH
T ss_pred             cCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc--CCEEEEEccchhccCCCCccHH
Confidence            99999999999987531  1367789999999999999999999999999999754  4899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+++++|++.++.|++++||+||+|+||+++|++.....  ..+.....+....|. +++.+|||+|++++||+++.
T Consensus       175 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~~p~-~~~~~~~dva~~~~~l~s~~  251 (285)
T 2p91_A          175 GIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSIT--GFHLLMEHTTKVNPF-GKPITIEDVGDTAVFLCSDW  251 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CT--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHTSGG
T ss_pred             HHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhccc--chHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCCc
Confidence            999999999999999999999999999999999999865321  122323333334465 78899999999999999988


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|++|.+|||+.+
T Consensus       252 ~~~~tG~~~~vdgg~~~  268 (285)
T 2p91_A          252 ARAITGEVVHVDNGYHI  268 (285)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             ccCCCCCEEEECCCccc
Confidence            99999999999999864

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=100.00  E-value=2.7e-45  Score=304.07  Aligned_cols=248  Identities=27%  Similarity=0.422  Sum_probs=188.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++++.+.
T Consensus         9 ~~~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   88 (266)
T 1xq1_A            9 RWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSM   88 (266)
T ss_dssp             TTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHH
Confidence            4568899999999999999999999999999988888876554433332221 246889999999999999999999999


Q ss_pred             c-CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 Y-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      + +++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+
T Consensus        89 ~~~~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~  165 (266)
T 1xq1_A           89 FGGKLDILINNLGAIRSK--PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIYS  165 (266)
T ss_dssp             HTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHHH
T ss_pred             hCCCCcEEEECCCCCCCC--ChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEccchhccCCCCCchHH
Confidence            9 8999999999987544  778889999999999999999999999999998776 68999999999998888999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|++++.|++.++.|++++||++++|+||++.|++.....   .+.....+....|. +++.+|+|+|+++++|+++..
T Consensus       166 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~  241 (266)
T 1xq1_A          166 ATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---DDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCMPAA  241 (266)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGGG
T ss_pred             HHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCccc
Confidence            99999999999999999999999999999999999875432   11222223334455 678999999999999999888


Q ss_pred             CCeeccEEEecCeeecC
Q 041914          248 EFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~~  264 (264)
                      .+++|+.|.+|||+.++
T Consensus       242 ~~~~G~~~~v~gG~~~~  258 (266)
T 1xq1_A          242 SYITGQTICVDGGLTVN  258 (266)
T ss_dssp             TTCCSCEEECCCCEEET
T ss_pred             cCccCcEEEEcCCcccc
Confidence            99999999999998763

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=100.00  E-value=1e-46  Score=321.67  Aligned_cols=246  Identities=17%  Similarity=0.195  Sum_probs=204.9

Q ss_pred             CCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchh--------hHHHHHhhhC-----CCcEEEEEecCCCH--H
Q 041914           14 EGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDE--------LGRQVATSIG-----VGKCHYVHCDVTNE--C   76 (264)
Q Consensus        14 ~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~--------~~~~~~~~~~-----~~~~~~~~~D~s~~--~   76 (264)
                      ++|++||||+++  |||+++|++|+++|++|++.++++..        ..+.......     ...+.++++|+++.  +
T Consensus         1 ~~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~   80 (329)
T 3lt0_A            1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence            479999999985  99999999999999998877765421        0011111111     12478899999888  7


Q ss_pred             ------------------HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHH
Q 041914           77 ------------------QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV  138 (264)
Q Consensus        77 ------------------~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~  138 (264)
                                        +++++++++.++++++|+||||||+......++.+.+.++|++++++|+.+++++++.++|+
T Consensus        81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~  160 (329)
T 3lt0_A           81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                              99999999999999999999999986433458899999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEecCCCCCCCCCCCc-hhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCCh----
Q 041914          139 MVEGGVRGSIVCTASVAGSCGGKRRT-DYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMPA----  212 (264)
Q Consensus       139 ~~~~~~~~~iv~iss~~~~~~~~~~~-~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~----  212 (264)
                      |+++   |+||++||..+..+.++.. .|++||+|+++|+++++.|+++ +||+||+|+||+++|+|.........    
T Consensus       161 m~~~---g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~  237 (329)
T 3lt0_A          161 MKPQ---SSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC--------
T ss_pred             HhhC---CeEEEEeCccccCCCCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhcccccc
Confidence            9874   7999999999999999986 9999999999999999999998 89999999999999999876421100    


Q ss_pred             -------------------------------------HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEE
Q 041914          213 -------------------------------------DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL  255 (264)
Q Consensus       213 -------------------------------------~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i  255 (264)
                                                           ++..+.+....|. +|+.+|||||++++||+++...++||++|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~fL~s~~a~~itG~~i  316 (329)
T 3lt0_A          238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLSRESRAITGQTI  316 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             cccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcc-cCcCCHHHHHHHHHHHhCchhccccCcEE
Confidence                                                 0112333344566 89999999999999999999999999999


Q ss_pred             EecCeeec
Q 041914          256 VVDGGFLI  263 (264)
Q Consensus       256 ~~dgG~~~  263 (264)
                      .+|||+++
T Consensus       317 ~vdGG~~~  324 (329)
T 3lt0_A          317 YVDNGLNI  324 (329)
T ss_dssp             EESTTGGG
T ss_pred             EEcCCeeE
Confidence            99999986

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=100.00  E-value=5.2e-45  Score=300.22  Aligned_cols=247  Identities=32%  Similarity=0.466  Sum_probs=211.4

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcE-EEEEecCCCHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC-HYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .+++++++|++|||||++|||++++++|+++|++|+++.|+.++..+. .+.+. .++ .++.+|++|.++++++++++.
T Consensus         4 ~~~~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~   81 (254)
T 2wsb_A            4 RTVFRLDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRA-AQELG-AAVAARIVADVTDAEAMTAAAAEAE   81 (254)
T ss_dssp             TTTTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHG-GGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHhc-ccceeEEEEecCCHHHHHHHHHHHH
Confidence            355678999999999999999999999999999988888876654333 23332 255 889999999999999999998


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC--c
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--T  164 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~--~  164 (264)
                      + ++++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.+..  .
T Consensus        82 ~-~~~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~  157 (254)
T 2wsb_A           82 A-VAPVSILVNSAGIARLH--DALETDDATWRQVMAVNVDGMFWASRAFGRAMVARG-AGAIVNLGSMSGTIVNRPQFAS  157 (254)
T ss_dssp             H-HSCCCEEEECCCCCCCB--CSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCBH
T ss_pred             h-hCCCcEEEECCccCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CcEEEEEecchhccCCCCCcch
Confidence            8 89999999999987654  778889999999999999999999999999998876 7899999999998887777  8


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+++|++++.+++.++.|++++||++++|+||++.|++......  .++....+....|. +++.+|+|+|+++++|++
T Consensus       158 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  234 (254)
T 2wsb_A          158 SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRE--RPELFETWLDMTPM-GRCGEPSEIAAAALFLAS  234 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHT--CHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhcccc--ChHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhC
Confidence            999999999999999999999999999999999999998754321  12222223333455 788999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|+.|.+|||+++
T Consensus       235 ~~~~~~~G~~~~v~gG~~~  253 (254)
T 2wsb_A          235 PAASYVTGAILAVDGGYTV  253 (254)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             cccccccCCEEEECCCEec
Confidence            8888999999999999875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=100.00  E-value=5.5e-45  Score=301.78  Aligned_cols=249  Identities=25%  Similarity=0.358  Sum_probs=211.2

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ..+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|.++++++++++.
T Consensus         8 ~~~~~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   87 (265)
T 1h5q_A            8 FTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQID   87 (265)
T ss_dssp             EEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCcccCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999999999998876554333322211  2468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC----
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR----  162 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~----  162 (264)
                      +.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.+.    
T Consensus        88 ~~~~~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~  165 (265)
T 1h5q_A           88 ADLGPISGLIANAGVSVVK--PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNG  165 (265)
T ss_dssp             HHSCSEEEEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTE
T ss_pred             HhcCCCCEEEECCCcCCCC--chhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccc
Confidence            9999999999999987654  7888999999999999999999999999999987653489999999988765532    


Q ss_pred             ---CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          163 ---RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       163 ---~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                         ...|++||++++.|++.++.|++++||++++|+||++.|++....   . +.....+....|. +++.+|||+|+++
T Consensus       166 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~dva~~~  240 (265)
T 1h5q_A          166 SLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM---D-KKIRDHQASNIPL-NRFAQPEEMTGQA  240 (265)
T ss_dssp             ECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---C-HHHHHHHHHTCTT-SSCBCGGGGHHHH
T ss_pred             cccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccccccc---c-hhHHHHHHhcCcc-cCCCCHHHHHHHH
Confidence               788999999999999999999999999999999999999987643   1 2222223334455 7889999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeeecC
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++|+++...+++|+.|.+|||+.++
T Consensus       241 ~~l~~~~~~~~~G~~~~v~gG~~~~  265 (265)
T 1h5q_A          241 ILLLSDHATYMTGGEYFIDGGQLIW  265 (265)
T ss_dssp             HHHHSGGGTTCCSCEEEECTTGGGC
T ss_pred             HhhccCchhcCcCcEEEecCCEeCC
Confidence            9999988899999999999998763

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=100.00  E-value=1.2e-44  Score=299.06  Aligned_cols=249  Identities=31%  Similarity=0.409  Sum_probs=211.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..+++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++++|++|.++++++++++.+
T Consensus         7 ~~~~l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   86 (260)
T 3awd_A            7 EKLRLDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHE   86 (260)
T ss_dssp             GGGCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHH
Confidence            34568999999999999999999999999999988888876554333222221 24689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC--ch
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--TD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~--~~  165 (264)
                      +++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++.  ..
T Consensus        87 ~~~~id~vi~~Ag~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~  164 (260)
T 3awd_A           87 QEGRVDILVACAGICISE-VKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQK-QGVIVAIGSMSGLIVNRPQQQAA  164 (260)
T ss_dssp             HHSCCCEEEECCCCCCCS-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCSSSCCHH
T ss_pred             HcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcC-CCEEEEEecchhcccCCCCCccc
Confidence            999999999999987522 3778899999999999999999999999999998766 7899999999998877776  89


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccc-cccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTC-HAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      |+++|++++.|++.++.|++++||++++|+||++.|++.. ...   .+.....+....|. +++.+|+|+|+++++|++
T Consensus       165 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~  240 (260)
T 3awd_A          165 YNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGME---KPELYDAWIAGTPM-GRVGQPDEVASVVQFLAS  240 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHT---CHHHHHHHHHTCTT-SSCBCHHHHHHHHHHHHS
T ss_pred             cHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccC---ChHHHHHHHhcCCc-CCCCCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999875 221   12222333334555 788999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|+.|.+|||+.+
T Consensus       241 ~~~~~~~G~~~~v~gg~~~  259 (260)
T 3awd_A          241 DAASLMTGAIVNVDAGFTV  259 (260)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             chhccCCCcEEEECCceec
Confidence            8888999999999999864

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=100.00  E-value=7.1e-45  Score=298.34  Aligned_cols=234  Identities=23%  Similarity=0.330  Sum_probs=202.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecC--CCHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDV--TNECQVKALVDS   84 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~--s~~~~~~~~~~~   84 (264)
                      .+.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..+..++.+|+  ++.+++++++++
T Consensus         8 ~~~~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~   87 (247)
T 3i1j_A            8 HPELLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAAR   87 (247)
T ss_dssp             CTTTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHH
T ss_pred             CCccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHH
Confidence            34568999999999999999999999999999988888887665443333221  13566777777  999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +.+.++++|+||||||+.... .++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.+++.
T Consensus        88 ~~~~~g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~  165 (247)
T 3i1j_A           88 VEHEFGRLDGLLHNASIIGPR-TPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSE-DASIAFTSSSVGRKGRANWG  165 (247)
T ss_dssp             HHHHHSCCSEEEECCCCCCCC-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS-SEEEEEECCGGGTSCCTTCH
T ss_pred             HHHhCCCCCEEEECCccCCCC-CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCeEEEEcchhhcCCCCCcc
Confidence            999999999999999986443 3788999999999999999999999999999998877 78999999999999999999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          165 DYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      .|++||+|+++|++.++.|+++ +||+||+|+||+++|+|......            ..+. .+..+|||+|+.++||+
T Consensus       166 ~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~~~------------~~~~-~~~~~p~dva~~~~~l~  232 (247)
T 3i1j_A          166 AYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQAYP------------DENP-LNNPAPEDIMPVYLYLM  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHHST------------TSCG-GGSCCGGGGTHHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhccc------------ccCc-cCCCCHHHHHHHHHHHh
Confidence            9999999999999999999987 79999999999999998653321            1111 45678999999999999


Q ss_pred             CCCCCCeeccEEEe
Q 041914          244 CRDSEFVTGHDLVV  257 (264)
Q Consensus       244 s~~~~~~~G~~i~~  257 (264)
                      +++.+++||++|.+
T Consensus       233 s~~~~~itG~~i~~  246 (247)
T 3i1j_A          233 GPDSTGINGQALNA  246 (247)
T ss_dssp             SGGGTTCCSCEEEC
T ss_pred             CchhccccCeeecC
Confidence            99999999999975

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=100.00  E-value=1.9e-44  Score=298.44  Aligned_cols=238  Identities=24%  Similarity=0.351  Sum_probs=199.4

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.|.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.+++.++++++.
T Consensus        22 ~~m~~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~  101 (262)
T 3rkr_A           22 KHMSSLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVL  101 (262)
T ss_dssp             ---CTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred             chhhccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHH
Confidence            346678999999999999999999999999999988888877665444333322 3478999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.++...|
T Consensus       102 ~~~g~id~lv~~Ag~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y  179 (262)
T 3rkr_A          102 AAHGRCDVLVNNAGVGWFG-GPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAK-RGHIINISSLAGKNPVADGAAY  179 (262)
T ss_dssp             HHHSCCSEEEECCCCCCCS-SCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CCEEEEECSSCSSCCCTTCHHH
T ss_pred             HhcCCCCEEEECCCccCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CceEEEEechhhcCCCCCCchH
Confidence            9999999999999984332 3788899999999999999999999999999998877 7899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||+++++|++.++.|+++.||+||+|+||+++|++.....            ...+. .+..+|+|+|++++||+++.
T Consensus       180 ~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------------~~~~~-~~~~~p~dvA~~v~~l~s~~  246 (262)
T 3rkr_A          180 TASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS------------AKKSA-LGAIEPDDIADVVALLATQA  246 (262)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc------------ccccc-ccCCCHHHHHHHHHHHhcCc
Confidence            999999999999999999999999999999999999864321            11222 56789999999999999999


Q ss_pred             CCCeeccEEEecCe
Q 041914          247 SEFVTGHDLVVDGG  260 (264)
Q Consensus       247 ~~~~~G~~i~~dgG  260 (264)
                      ...++|+.+..+.|
T Consensus       247 ~~~~~g~~~i~p~~  260 (262)
T 3rkr_A          247 DQSFISEVLVRPTL  260 (262)
T ss_dssp             TTCCEEEEEEECCC
T ss_pred             cccccCcEEecccc
Confidence            99999999988765

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=100.00  E-value=7.7e-45  Score=301.01  Aligned_cols=245  Identities=27%  Similarity=0.407  Sum_probs=203.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.+++++|++|||||++|||++++++|+++|++|+++.|+.++..+... .. ..++.++++|++|+++++++++++.++
T Consensus         6 ~~~~~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~   83 (265)
T 2o23_A            6 ACRSVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAK-KL-GNNCVFAPADVTSEKDVQTALALAKGK   83 (265)
T ss_dssp             --CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHH-HH-CTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHH-Hh-CCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence            3456899999999999999999999999999999999888765544333 33 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCcc------CCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC------CCCcEEEEecCCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVL------DLDFSAFDRLFAINVRGMAACVKHAARVMVEG------GVRGSIVCTASVAG  156 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~------~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~------~~~~~iv~iss~~~  156 (264)
                      ++++|+||||||+....  ++.      +.+.++|++.+++|+.+++.+++.++|.|+++      + .++||++||..+
T Consensus        84 ~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~  160 (265)
T 2o23_A           84 FGRVDVAVNCAGIAVAS--KTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQ-RGVIINTASVAA  160 (265)
T ss_dssp             HSCCCEEEECCCCCCCC--CSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSC-CEEEEEECCTHH
T ss_pred             CCCCCEEEECCccCCCC--ccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCC-CcEEEEeCChhh
Confidence            99999999999987553  333      47899999999999999999999999999876      4 689999999999


Q ss_pred             CCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          157 SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       157 ~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                      ..+.++...|+++|++++.|++.++.|++++||++|+|+||+++|++.....    +.....+....|..+++.+|+|+|
T Consensus       161 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~dva  236 (265)
T 2o23_A          161 FEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP----EKVCNFLASQVPFPSRLGDPAEYA  236 (265)
T ss_dssp             HHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSSSCSCBCHHHHH
T ss_pred             cCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccC----HHHHHHHHHcCCCcCCCCCHHHHH
Confidence            9898999999999999999999999999999999999999999999875421    111111222334436788999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +.+++|++  ..+++|+.|.+|||+.++
T Consensus       237 ~~~~~l~~--~~~~~G~~i~vdgG~~~~  262 (265)
T 2o23_A          237 HLVQAIIE--NPFLNGEVIRLDGAIRMQ  262 (265)
T ss_dssp             HHHHHHHH--CTTCCSCEEEESTTCCCC
T ss_pred             HHHHHHhh--cCccCceEEEECCCEecC
Confidence            99999995  579999999999998764

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=100.00  E-value=1.1e-44  Score=301.31  Aligned_cols=236  Identities=27%  Similarity=0.399  Sum_probs=184.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .|.++.+|++|||||++|||++++++|+++|++|+++.|+.++..+.. +.+. .++.++++|++|+++++++++++.++
T Consensus        22 ~m~~~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~   99 (272)
T 4dyv_A           22 SMSKTGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETA-AEIG-DDALCVPTDVTDPDSVRALFTATVEK   99 (272)
T ss_dssp             ------CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHT-SCCEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             hhcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHhC-CCeEEEEecCCCHHHHHHHHHHHHHH
Confidence            355789999999999999999999999999999888888766554433 3333 46889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-CcEEEEecCCCCCCCCCCCchhh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-RGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.++++++++++|.|++++. .|+||++||..+..+.++...|+
T Consensus       100 ~g~iD~lVnnAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~  178 (272)
T 4dyv_A          100 FGRVDVLFNNAGTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYT  178 (272)
T ss_dssp             HSCCCEEEECCCCCCCS-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHH
T ss_pred             cCCCCEEEECCCCCCCC-CChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHH
Confidence            99999999999987542 37889999999999999999999999999999987541 58999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|++.++.|++++||+||+|+||+++|++........     .......|. +++.+|||+|++++||++...
T Consensus       179 asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~-~~~~~pedvA~~v~fL~s~~~  252 (272)
T 4dyv_A          179 ATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGV-----PQADLSIKV-EPVMDVAHVASAVVYMASLPL  252 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC------------------------------CHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccc-----hhhhhcccc-cCCCCHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999999876542211     111122344 678899999999999998655


Q ss_pred             CCeecc
Q 041914          248 EFVTGH  253 (264)
Q Consensus       248 ~~~~G~  253 (264)
                      ....++
T Consensus       253 ~~~~~~  258 (272)
T 4dyv_A          253 DANVQF  258 (272)
T ss_dssp             TSCCCE
T ss_pred             cCccce
Confidence            444333

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=100.00  E-value=3.1e-44  Score=294.94  Aligned_cols=245  Identities=33%  Similarity=0.478  Sum_probs=209.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|+++++++++++.++++++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            68999999999999999999999999988888876654433322212  2468999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCC-CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           93 DIMFSNAGILSSSD-QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        93 d~lv~~ag~~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      |+||||||+..... ..+.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+++|+
T Consensus        82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~  160 (250)
T 2cfc_A           82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQG-AGVIVNIASVASLVAFPGRSAYTTSKG  160 (250)
T ss_dssp             CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCchhHHHHHH
Confidence            99999999865431 1278889999999999999999999999999998876 789999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +++.|++.++.|++++||++++++||++.|++......  .+.....+....|. +++.+|+|+|+++++|+++...+++
T Consensus       161 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~  237 (250)
T 2cfc_A          161 AVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLD--QPELRDQVLARIPQ-KEIGTAAQVADAVMFLAGEDATYVN  237 (250)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHT--SHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSTTCTTCC
T ss_pred             HHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccC--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCchhhccc
Confidence            99999999999999999999999999999998754211  12233333344566 7889999999999999998889999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |++|.+|||+++
T Consensus       238 G~~~~v~gG~~~  249 (250)
T 2cfc_A          238 GAALVMDGAYTA  249 (250)
T ss_dssp             SCEEEESTTGGG
T ss_pred             CCEEEECCceec
Confidence            999999999864

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=100.00  E-value=7.5e-46  Score=299.78  Aligned_cols=223  Identities=24%  Similarity=0.294  Sum_probs=191.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      |+++++|++|||||++|||++++++|+++|++|+++.|+.+                   +|++|+++++++++++    
T Consensus         1 M~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~~~----   57 (223)
T 3uce_A            1 MMGSDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG-------------------LDISDEKSVYHYFETI----   57 (223)
T ss_dssp             ----CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHHHH----
T ss_pred             CCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHHHh----
Confidence            35688999999999999999999999999999888877643                   8999999999998754    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|+|++   .|+||++||..+..+.++...|+++
T Consensus        58 g~id~lv~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~Y~as  133 (223)
T 3uce_A           58 GAFDHLIVTAGSYAPA-GKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQ---GGSITLTSGMLSRKVVANTYVKAAI  133 (223)
T ss_dssp             CSEEEEEECCCCCCCC-SCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC-CCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccC---CeEEEEecchhhccCCCCchHHHHH
Confidence            7999999999987432 37889999999999999999999999999999976   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.|++.++.|+++  |+||+|+||+++|++.........+...+.+....|. +++.+|||+|+++++|++  +.+
T Consensus       134 K~a~~~~~~~la~e~~~--i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~--~~~  208 (223)
T 3uce_A          134 NAAIEATTKVLAKELAP--IRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV-GKVGEASDIAMAYLFAIQ--NSY  208 (223)
T ss_dssp             HHHHHHHHHHHHHHHTT--SEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHH--CTT
T ss_pred             HHHHHHHHHHHHHhhcC--cEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC-CCccCHHHHHHHHHHHcc--CCC
Confidence            99999999999999987  9999999999999987654221122223334444566 889999999999999997  579


Q ss_pred             eeccEEEecCeeecC
Q 041914          250 VTGHDLVVDGGFLIR  264 (264)
Q Consensus       250 ~~G~~i~~dgG~~~~  264 (264)
                      +||++|.+|||+.++
T Consensus       209 ~tG~~i~vdgG~~~s  223 (223)
T 3uce_A          209 MTGTVIDVDGGALLG  223 (223)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCcEEEecCCeecC
Confidence            999999999999874

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=100.00  E-value=6e-45  Score=298.63  Aligned_cols=244  Identities=28%  Similarity=0.491  Sum_probs=188.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.++..+..+...+.+  ...++.++.+|++|+++++++++++.+.+
T Consensus         2 ~l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (247)
T 2hq1_A            2 QLKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF   81 (247)
T ss_dssp             TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence            4789999999999999999999999999998888444433333333322  13468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+++
T Consensus        82 ~~~d~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~s  158 (247)
T 2hq1_A           82 GRIDILVNNAGITRDT--LMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQK-SGKIINITSIAGIIGNAGQANYAAS  158 (247)
T ss_dssp             SCCCEEEECC-----------------CHHHHHHTHHHHHHHHHHHHHHHHHHT-CEEEEEECC---------CHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcChhhccCCCCCcHhHHH
Confidence            9999999999987543  677788999999999999999999999999998776 7899999999998888899999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.|++.++.|+++.||++|+++||++.|++....   . +.....+....|. +++.+|+|+|+++++|+++...+
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  233 (247)
T 2hq1_A          159 KAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVL---P-DKVKEMYLNNIPL-KRFGTPEEVANVVGFLASDDSNY  233 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---C-HHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhc---c-hHHHHHHHhhCCC-CCCCCHHHHHHHHHHHcCccccc
Confidence            99999999999999999999999999999999986532   1 2223333344565 78899999999999999988889


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      ++|+.|++|||+++
T Consensus       234 ~~G~~~~v~gG~~~  247 (247)
T 2hq1_A          234 ITGQVINIDGGLVM  247 (247)
T ss_dssp             CCSCEEEESTTC--
T ss_pred             ccCcEEEeCCCccC
Confidence            99999999999864

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-44  Score=302.30  Aligned_cols=246  Identities=23%  Similarity=0.377  Sum_probs=208.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++++.+.
T Consensus        39 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  118 (285)
T 2c07_A           39 YYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTE  118 (285)
T ss_dssp             CCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHh
Confidence            4567899999999999999999999999999988876665544333222222 246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++
T Consensus       119 ~~~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~a  195 (285)
T 2c07_A          119 HKNVDILVNNAGITRDN--LFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSS  195 (285)
T ss_dssp             CSCCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCC--chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEECChhhccCCCCCchHHH
Confidence            99999999999987554  788899999999999999999999999999998766 689999999999888899999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.|++.++.|+++.||++++|+||++.|++....   . +.....+....|. +++.+|+|+|+++++|+++...
T Consensus       196 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~dvA~~~~~l~~~~~~  270 (285)
T 2c07_A          196 SKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI---S-EQIKKNIISNIPA-GRMGTPEEVANLACFLSSDKSG  270 (285)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C---C-HHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhc---C-HHHHHHHHhhCCC-CCCCCHHHHHHHHHHHhCCCcC
Confidence            999999999999999999999999999999999986532   1 2233333344566 7899999999999999998889


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||+.+
T Consensus       271 ~~~G~~i~v~gG~~~  285 (285)
T 2c07_A          271 YINGRVFVIDGGLSP  285 (285)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             CCCCCEEEeCCCccC
Confidence            999999999999864

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=100.00  E-value=1.8e-44  Score=301.11  Aligned_cols=247  Identities=23%  Similarity=0.427  Sum_probs=208.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.++..+...... ...++.++++|++|.++++++++++.+.
T Consensus        29 ~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~  108 (279)
T 3ctm_A           29 LFSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKD  108 (279)
T ss_dssp             GGCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHH
Confidence            456899999999999999999999999999999888887655433222111 1246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCcc-CCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC--CCCCch
Q 041914           89 YGQLDIMFSNAGILSSSDQTVL-DLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG--GKRRTD  165 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~--~~~~~~  165 (264)
                      ++++|+||||||+.... .++. +.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+  .++...
T Consensus       109 ~g~id~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~~~  186 (279)
T 3ctm_A          109 FGTIDVFVANAGVTWTQ-GPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNG-KGSLIITSSISGKIVNIPQLQAP  186 (279)
T ss_dssp             HSCCSEEEECGGGSTTC---CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCCTTSCC---CCHHH
T ss_pred             hCCCCEEEECCcccccC-CcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCeEEEECchHhccCCCCCCccc
Confidence            99999999999987551 2565 788999999999999999999999999998876 789999999999888  788899


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++|++++.|++.++.|+++.+ ++|+|+||+++|++....   . ++....+....|. +++.+|+|+|+.+++|+++
T Consensus       187 Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~p~-~~~~~~~dvA~~~~~l~s~  260 (279)
T 3ctm_A          187 YNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFA---S-KDMKAKWWQLTPL-GREGLTQELVGGYLYLASN  260 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSC---C-HHHHHHHHHHSTT-CSCBCGGGTHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCcccccccc---C-hHHHHHHHHhCCc-cCCcCHHHHHHHHHHHhCc
Confidence            99999999999999999999999 999999999999987421   1 2222222233455 7889999999999999998


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      ...+++|++|.+|||+.++
T Consensus       261 ~~~~~tG~~i~vdgG~~~~  279 (279)
T 3ctm_A          261 ASTFTTGSDVVIDGGYTCP  279 (279)
T ss_dssp             GGTTCCSCEEEESTTCCC-
T ss_pred             cccCccCCEEEECCCeecC
Confidence            8899999999999998764

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=100.00  E-value=2.9e-45  Score=302.77  Aligned_cols=244  Identities=19%  Similarity=0.207  Sum_probs=202.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHH---cCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFAD---HGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~---~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ++|++|++|||||++|||++++++|++   +|++|+++.|+.+...+...+..   ...++.++++|++|++++++++++
T Consensus         2 ~~l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~   81 (259)
T 1oaa_A            2 DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSA   81 (259)
T ss_dssp             CCCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHH
T ss_pred             CCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHH
Confidence            468899999999999999999999999   89998888887665443332221   134789999999999999999999


Q ss_pred             HHH--hcCCcc--EEEEcCCCCCCCCCCccC-CCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC--CCCcEEEEecCCCCC
Q 041914           85 TVQ--NYGQLD--IMFSNAGILSSSDQTVLD-LDFSAFDRLFAINVRGMAACVKHAARVMVEG--GVRGSIVCTASVAGS  157 (264)
Q Consensus        85 ~~~--~~~~id--~lv~~ag~~~~~~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~--~~~~~iv~iss~~~~  157 (264)
                      +.+  .++++|  +||||||+......++.+ .+.++|++++++|+.+++++++.++|.|+++  + .|+||++||..+.
T Consensus        82 ~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~-~g~iv~isS~~~~  160 (259)
T 1oaa_A           82 VRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGL-SKTVVNISSLCAL  160 (259)
T ss_dssp             HHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTC-EEEEEEECCGGGT
T ss_pred             HHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-CceEEEEcCchhc
Confidence            988  678898  999999986542236777 7999999999999999999999999999876  4 6899999999999


Q ss_pred             CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-CChHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          158 CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-MPADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       158 ~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                      .+.++...|++||+++++|++.++.|+++  |+||+|+||+++|+|...... ...++..+.+....|. +++.+|||+|
T Consensus       161 ~~~~~~~~Y~asKaa~~~~~~~la~e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~p~dvA  237 (259)
T 1oaa_A          161 QPYKGWGLYCAGKAARDMLYQVLAAEEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSA  237 (259)
T ss_dssp             SCCTTCHHHHHHHHHHHHHHHHHHHHCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT-TCSBCHHHHH
T ss_pred             CCCCCccHHHHHHHHHHHHHHHHHhhCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhhc-CCcCCHHHHH
Confidence            99999999999999999999999999974  999999999999998654311 0012222222222344 7889999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecC
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      +.++||+++ .+++||++|.+||
T Consensus       238 ~~v~~l~~~-~~~itG~~i~vdg  259 (259)
T 1oaa_A          238 QKLLGLLQK-DTFQSGAHVDFYD  259 (259)
T ss_dssp             HHHHHHHHH-CCSCTTEEEETTC
T ss_pred             HHHHHHHhh-ccccCCcEEeccC
Confidence            999999985 7899999999986

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=100.00  E-value=1.5e-45  Score=301.90  Aligned_cols=233  Identities=19%  Similarity=0.208  Sum_probs=196.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEE-e--cCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVI-A--DIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|++|||||++|||++++++|+++|++|+++ .  |+.++. +.+.+.+.  .     .|+.|.++++++++++.+.+++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~-~~~~~~~~--~-----~~~~~~~~v~~~~~~~~~~~g~   72 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAER-QRFESENP--G-----TIALAEQKPERLVDATLQHGEA   72 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHH-HHHHHHST--T-----EEECCCCCGGGHHHHHGGGSSC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHH-HHHHHHhC--C-----CcccCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999998877 4  665544 33333331  1     2333777888999999999999


Q ss_pred             ccEEEEcCCCCCC---CCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           92 LDIMFSNAGILSS---SDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        92 id~lv~~ag~~~~---~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      +|+||||||+...   .  ++.+.+.++|++++++|+.+++++++.++|+|++++ .++||++||..+..+.++...|++
T Consensus        73 iD~lv~~Ag~~~~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~a  149 (244)
T 1zmo_A           73 IDTIVSNDYIPRPMNRL--PLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAG-GASVIFITSSVGKKPLAYNPLYGP  149 (244)
T ss_dssp             EEEEEECCCCCTTGGGC--CSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCGGGTSCCTTCTTHHH
T ss_pred             CCEEEECCCcCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECChhhCCCCCCchHHHH
Confidence            9999999998755   4  788899999999999999999999999999998876 799999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccc---ccccCCChHHHHhhcCC-CCCCCCCCCChHHHHHHHHHHhC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLT---CHAYGMPADEVEKLFEP-QTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ||+++++|++.++.|++++||+||+|+||+++|+|.   .....   ++....+.. ..|. +++.+|||+|+.++||++
T Consensus       150 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~---~~~~~~~~~~~~p~-~r~~~pe~vA~~v~~l~s  225 (244)
T 1zmo_A          150 ARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWEN---NPELRERVDRDVPL-GRLGRPDEMGALITFLAS  225 (244)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHH---CHHHHHHHHHHCTT-CSCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccc---hHHHHHHHhcCCCC-CCCcCHHHHHHHHHHHcC
Confidence            999999999999999999999999999999999987   43210   111122222 3455 788999999999999999


Q ss_pred             CCCCCeeccEEEecCeee
Q 041914          245 RDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~  262 (264)
                      +...++||+.|.+|||++
T Consensus       226 ~~~~~~tG~~i~vdgG~~  243 (244)
T 1zmo_A          226 RRAAPIVGQFFAFTGGYL  243 (244)
T ss_dssp             TTTGGGTTCEEEESTTCC
T ss_pred             ccccCccCCEEEeCCCCC
Confidence            989999999999999974

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=100.00  E-value=2e-44  Score=293.60  Aligned_cols=223  Identities=18%  Similarity=0.192  Sum_probs=187.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|++|||||++|||++++++|+++|++|+++.|+.++..+. .+.... ++.++++|++|+++++++++++.+.++++|
T Consensus         2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   79 (235)
T 3l6e_A            2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQ-ELLLGN-AVIGIVADLAHHEDVDVAFAAAVEWGGLPE   79 (235)
T ss_dssp             -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHGG-GEEEEECCTTSHHHHHHHHHHHHHHHCSCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHhcC-CceEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence            479999999999999999999999999988888876655443 333332 689999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++  ++||++||..+..+.++...|++||+|+
T Consensus        80 ~lvnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~  155 (235)
T 3l6e_A           80 LVLHCAGTGEFG--PVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERG--GVLANVLSSAAQVGKANESLYCASKWGM  155 (235)
T ss_dssp             EEEEECCCC--------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEEEECCEECCSSCSSHHHHHHHHHHH
T ss_pred             EEEECCCCCCCC--ChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC--CEEEEEeCHHhcCCCCCCcHHHHHHHHH
Confidence            999999986554  788899999999999999999999999999998765  5999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC-CCCCCeec
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC-RDSEFVTG  252 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s-~~~~~~~G  252 (264)
                      ++|+++++.|++++||+||+|+||+++|++......             .+. .++.+|||+|+.+++|++ +...+++|
T Consensus       156 ~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-------------~~~-~~~~~pedvA~~v~~l~~~~~~~~i~~  221 (235)
T 3l6e_A          156 RGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH-------------VDP-SGFMTPEDAAAYMLDALEARSSCHVTD  221 (235)
T ss_dssp             HHHHHHHHHHTTTSSEEEEEEEEEEECCCC-------------------------CBCHHHHHHHHHHHTCCCSSEEEEE
T ss_pred             HHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC-------------CCC-cCCCCHHHHHHHHHHHHhCCCCcceee
Confidence            999999999999999999999999999998653211             122 578899999999999998 56778888


Q ss_pred             cEEE
Q 041914          253 HDLV  256 (264)
Q Consensus       253 ~~i~  256 (264)
                      -.+.
T Consensus       222 i~~~  225 (235)
T 3l6e_A          222 LFIG  225 (235)
T ss_dssp             EEEE
T ss_pred             EEEe
Confidence            6554

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=100.00  E-value=2.4e-44  Score=294.49  Aligned_cols=241  Identities=28%  Similarity=0.499  Sum_probs=206.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ||++|||||++|||++++++|+++|++|+++.++..+..+.+.+.+.  ..++.++++|++|+++++++++++.+.++++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            58999999999999999999999999988854443333333333221  2468899999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|+++|++
T Consensus        81 d~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (244)
T 1edo_A           81 DVVVNNAGITRDT--LLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAG  157 (244)
T ss_dssp             SEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHH
T ss_pred             CEEEECCCCCCCc--CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcC-CCEEEEECChhhcCCCCCCccchhhHHH
Confidence            9999999987654  778899999999999999999999999999998766 7899999999988888999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh-CCCCCCee
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA-CRDSEFVT  251 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~-s~~~~~~~  251 (264)
                      ++.|++.++.|++++||++++|+||++.|++....   . +.....+....|. +++.+|+|+|+++++|+ ++...+++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~~~  232 (244)
T 1edo_A          158 VIGFSKTAAREGASRNINVNVVCPGFIASDMTAKL---G-EDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYIT  232 (244)
T ss_dssp             HHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT---C-HHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGGGGCC
T ss_pred             HHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhc---C-hHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCCCccCCcC
Confidence            99999999999999999999999999999987542   1 2222333344566 78899999999999999 77788999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |+.|.+|||+.+
T Consensus       233 G~~~~v~gG~~~  244 (244)
T 1edo_A          233 GQAFTIDGGIAI  244 (244)
T ss_dssp             SCEEEESTTTTC
T ss_pred             CCEEEeCCCccC
Confidence            999999999864

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=100.00  E-value=6.4e-44  Score=292.76  Aligned_cols=238  Identities=29%  Similarity=0.410  Sum_probs=200.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+.+
T Consensus         3 ~~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~   82 (247)
T 2jah_A            3 SALQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEAL   82 (247)
T ss_dssp             CTTTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence            357899999999999999999999999999988888876654333322221 2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|.+++  |+||++||..+..+.++...|++|
T Consensus        83 g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~as  158 (247)
T 2jah_A           83 GGLDILVNNAGIMLLG--PVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK--GTVVQMSSIAGRVNVRNAAVYQAT  158 (247)
T ss_dssp             SCCSEEEECCCCCCCC--CSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTCCCTTCHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC--CEEEEEccHHhcCCCCCCcHHHHH
Confidence            9999999999987544  788899999999999999999999999999998764  899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCC--CChHHHHHHHHHHhCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV--LRAGHVADAVLFLACRDS  247 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~edva~~~~~l~s~~~  247 (264)
                      |+++++|++.++.|++++||+||+|+||+++|++......   +.....+. ..|  +++  .+|||+|+.++||+++..
T Consensus       159 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~~~~~~~-~~~--~~~~~~~pedvA~~v~~l~s~~~  232 (247)
T 2jah_A          159 KFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH---TATKEMYE-QRI--SQIRKLQAQDIAEAVRYAVTAPH  232 (247)
T ss_dssp             HHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC---HHHHHHHH-HHT--TTSCCBCHHHHHHHHHHHHHSCT
T ss_pred             HHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc---hhhHHHHH-hcc--cccCCCCHHHHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999998754321   11111111 112  344  899999999999999888


Q ss_pred             CCeeccEEEecC
Q 041914          248 EFVTGHDLVVDG  259 (264)
Q Consensus       248 ~~~~G~~i~~dg  259 (264)
                      .+++++ +.+++
T Consensus       233 ~~~~~~-i~i~~  243 (247)
T 2jah_A          233 HATVHE-IFIRP  243 (247)
T ss_dssp             TEEEEE-EEEEE
T ss_pred             cCccce-EEecC
Confidence            888876 45554

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.6e-45  Score=303.28  Aligned_cols=247  Identities=23%  Similarity=0.358  Sum_probs=193.1

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      |...+.+++||++|||||++|||+++|++|+++|++|+++.|+.+...+...+..  ....+.++++|++|.++++++++
T Consensus        24 ~~~~~~~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~  103 (281)
T 4dry_A           24 MAQGKGSGEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA  103 (281)
T ss_dssp             ----------CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred             ccccCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence            3344567899999999999999999999999999998888887765544333222  12246899999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCCCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~~~~  162 (264)
                      ++.++++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|.|++++ ..|+||++||..+..+.++
T Consensus       104 ~~~~~~g~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~  182 (281)
T 4dry_A          104 AVRAEFARLDLLVNNAGSNVPP-VPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPN  182 (281)
T ss_dssp             HHHHHHSCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTT
T ss_pred             HHHHHcCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCC
Confidence            9999999999999999986542 3788999999999999999999999999999998764 2589999999999999999


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ...|++||+|+++|++.++.|++++||+||+|+||+++|++........     .......+. +++.+|||+|++++||
T Consensus       183 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-----~~~~~~~~~-~~~~~pedvA~~v~fL  256 (281)
T 4dry_A          183 SAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTGV-----LQANGEVAA-EPTIPIEHIAEAVVYM  256 (281)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CEE-----ECTTSCEEE-CCCBCHHHHHHHHHHH
T ss_pred             ChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcchh-----hhhhhcccc-cCCCCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999876442110     011112333 6788999999999999


Q ss_pred             hCCC-CCCeeccEEEecC
Q 041914          243 ACRD-SEFVTGHDLVVDG  259 (264)
Q Consensus       243 ~s~~-~~~~~G~~i~~dg  259 (264)
                      ++.. ...+++..|.-..
T Consensus       257 ~s~~~~~~i~~~~i~p~~  274 (281)
T 4dry_A          257 ASLPLSANVLTMTVMATR  274 (281)
T ss_dssp             HHSCTTEEEEEEEEEETT
T ss_pred             hCCCccCccccEEEEecc
Confidence            9854 4455665555443

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=100.00  E-value=2.5e-44  Score=295.05  Aligned_cols=244  Identities=26%  Similarity=0.432  Sum_probs=209.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..  ...++.++.+|++|+++++++++++.+.
T Consensus         3 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   82 (248)
T 2pnf_A            3 IKLQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL   82 (248)
T ss_dssp             CCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence            45789999999999999999999999999998888887655433222211  1346889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++ .++||++||..+..+.++...|++
T Consensus        83 ~~~~d~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~  159 (248)
T 2pnf_A           83 VDGIDILVNNAGITRDK--LFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQR-WGRIVNISSVVGFTGNVGQVNYST  159 (248)
T ss_dssp             SSCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCC--ccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcC-CcEEEEEccHHhcCCCCCCchHHH
Confidence            99999999999987654  778899999999999999999999999999998776 789999999988888888999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.|++.++.|+++.||++++++||++.|++....   . +.....+....|. +++.+|+|+|+++++++++...
T Consensus       160 sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  234 (248)
T 2pnf_A          160 TKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVL---S-EEIKQKYKEQIPL-GRFGSPEEVANVVLFLCSELAS  234 (248)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS---C-HHHHHHHHHTCTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhc---c-HHHHHHHHhcCCC-CCccCHHHHHHHHHHHhCchhh
Confidence            999999999999999999999999999999999987542   1 2222223333455 6789999999999999998788


Q ss_pred             CeeccEEEecCeee
Q 041914          249 FVTGHDLVVDGGFL  262 (264)
Q Consensus       249 ~~~G~~i~~dgG~~  262 (264)
                      +++|+.|.+|||++
T Consensus       235 ~~~G~~~~v~gg~~  248 (248)
T 2pnf_A          235 YITGEVIHVNGGMF  248 (248)
T ss_dssp             TCCSCEEEESTTCC
T ss_pred             cCCCcEEEeCCCcC
Confidence            99999999999973

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=100.00  E-value=5.8e-44  Score=294.05  Aligned_cols=246  Identities=31%  Similarity=0.434  Sum_probs=210.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+.+...+...+.. ...++.++.+|++|+++++++++++.++
T Consensus         6 ~~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   85 (255)
T 1fmc_A            6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK   85 (255)
T ss_dssp             GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence            456889999999999999999999999999998888887655433322221 1246889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||.....  ++ +.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++
T Consensus        86 ~~~~d~vi~~Ag~~~~~--~~-~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~  161 (255)
T 1fmc_A           86 LGKVDILVNNAGGGGPK--PF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYAS  161 (255)
T ss_dssp             HSSCCEEEECCCCCCCC--CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHH
T ss_pred             cCCCCEEEECCCCCCCC--CC-CCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CcEEEEEcchhhcCCCCCCcccHH
Confidence            99999999999987654  44 689999999999999999999999999998876 789999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|++++.|++.++.|++++||++++++||++.|++.....  . +.....+....|. +++.+|+|+|+++++|+++...
T Consensus       162 sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~--~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~  237 (255)
T 1fmc_A          162 SKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI--T-PEIEQKMLQHTPI-RRLGQPQDIANAALFLCSPAAS  237 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC--C-HHHHHHHHHTCSS-CSCBCHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhcc--C-hHHHHHHHhcCCc-ccCCCHHHHHHHHHHHhCCccc
Confidence            9999999999999999999999999999999999865431  1 2222333334565 7889999999999999998888


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      +++|+.|.+|||...
T Consensus       238 ~~~G~~~~v~gg~~~  252 (255)
T 1fmc_A          238 WVSGQILTVSGGGVQ  252 (255)
T ss_dssp             TCCSCEEEESTTSCC
T ss_pred             cCCCcEEEECCceec
Confidence            999999999999765

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=100.00  E-value=2.2e-44  Score=299.43  Aligned_cols=242  Identities=20%  Similarity=0.308  Sum_probs=194.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..+++ |++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.+.. .++.++++|++|+++++++++++.+.
T Consensus        17 ~~~~~-k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   94 (272)
T 2nwq_A           17 GSHMS-STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQA-LAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEE   94 (272)
T ss_dssp             ----C-CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGG
T ss_pred             CCCcC-cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence            45567 999999999999999999999999998888887665433 3333322 46889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCc-EEEEecCCCCCCCCCCCchhh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRG-SIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~-~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++++|+||||||+.... .++.+.+.++|++++++|+.+++++++.++|.|++++ .| +||++||..+..+.++...|+
T Consensus        95 ~g~iD~lvnnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~-~g~~IV~isS~~~~~~~~~~~~Y~  172 (272)
T 2nwq_A           95 FATLRGLINNAGLALGT-DPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHG-AGASIVNLGSVAGKWPYPGSHVYG  172 (272)
T ss_dssp             GSSCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHC-TTCEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCCCEEEECCCCCCCC-CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCcEEEEeCCchhccCCCCCchHH
Confidence            99999999999986531 3788899999999999999999999999999998876 67 999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|++++.|++.++.|++++||+||+|+||+++|++...............+..     ....+|||+|+.++||+++ .
T Consensus       173 asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-----~~~~~pedvA~~v~~l~s~-~  246 (272)
T 2nwq_A          173 GTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAG-----AHPIQPEDIAETIFWIMNQ-P  246 (272)
T ss_dssp             HHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------C-----CCCBCHHHHHHHHHHHHTS-C
T ss_pred             HHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhcc-----CCCCCHHHHHHHHHHHhCC-C
Confidence            999999999999999999999999999999999998643211000001111111     2346999999999999985 6


Q ss_pred             CCeeccEEEecCee
Q 041914          248 EFVTGHDLVVDGGF  261 (264)
Q Consensus       248 ~~~~G~~i~~dgG~  261 (264)
                      .+++|+.|.+|+|.
T Consensus       247 ~~~~g~~i~v~~~~  260 (272)
T 2nwq_A          247 AHLNINSLEIMPVS  260 (272)
T ss_dssp             TTEEEEEEEEEETT
T ss_pred             ccCccceEEEeecc
Confidence            79999999999884

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=100.00  E-value=2.5e-44  Score=297.75  Aligned_cols=246  Identities=31%  Similarity=0.498  Sum_probs=204.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--------CcEEEEEecCCCHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------GKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~D~s~~~~~~~~~   82 (264)
                      .++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+....        .++.++++|++|.+++++++
T Consensus         3 ~~~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~   82 (264)
T 2pd6_A            3 NRLRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL   82 (264)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred             cccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence            4578999999999999999999999999999888888766543332222111        35789999999999999999


Q ss_pred             HHHHHhcCCc-cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           83 DSTVQNYGQL-DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        83 ~~~~~~~~~i-d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      +++.+.++++ |+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.+
T Consensus        83 ~~~~~~~g~i~d~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~  160 (264)
T 2pd6_A           83 EQVQACFSRPPSVVVSCAGITQDE--FLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNV  160 (264)
T ss_dssp             HHHHHHHSSCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCT
T ss_pred             HHHHHHhCCCCeEEEECCCcCCCc--chhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCC
Confidence            9999999998 9999999987654  778899999999999999999999999999998754247999999999888889


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|++||++++.|++.++.|++++||++++|+||++.|++.....    +.....+....|. +++.+|+|+|+++++
T Consensus       161 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~~-~~~~~~~dva~~~~~  235 (264)
T 2pd6_A          161 GQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVP----QKVVDKITEMIPM-GHLGDPEDVADVVAF  235 (264)
T ss_dssp             TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC--------------CTGGGCTT-CSCBCHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcC----HHHHHHHHHhCCC-CCCCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999865321    1222222233455 678899999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeec
Q 041914          242 LACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++++...+++|+.+.+|||+.+
T Consensus       236 l~~~~~~~~~G~~~~v~gg~~~  257 (264)
T 2pd6_A          236 LASEDSGYITGTSVEVTGGLFM  257 (264)
T ss_dssp             HHSGGGTTCCSCEEEESTTC--
T ss_pred             HcCCcccCCCCCEEEECCCcee
Confidence            9998888999999999999875

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=100.00  E-value=8.5e-45  Score=321.12  Aligned_cols=243  Identities=28%  Similarity=0.373  Sum_probs=203.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ...+++|++|||||++|||++++++|+++|++|+++.|+... ..+...+..   .+.++.+|++|.++++++++++.++
T Consensus       208 ~~~l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~---~~~~~~~Dvtd~~~v~~~~~~~~~~  284 (454)
T 3u0b_A          208 DKPLDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV---GGTALTLDVTADDAVDKITAHVTEH  284 (454)
T ss_dssp             TSTTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH---TCEEEECCTTSTTHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc---CCeEEEEecCCHHHHHHHHHHHHHH
Confidence            345789999999999999999999999999998888775432 112222222   3568999999999999999999999


Q ss_pred             cCC-ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 YGQ-LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~~~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++ +|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|.+++ .++||++||..+..+.+++..|+
T Consensus       285 ~g~~id~lV~nAGv~~~~--~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~-~g~iV~iSS~a~~~g~~g~~~Ya  361 (454)
T 3u0b_A          285 HGGKVDILVNNAGITRDK--LLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGE-GGRVIGLSSMAGIAGNRGQTNYA  361 (454)
T ss_dssp             STTCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCT-TCEEEEECCHHHHHCCTTCHHHH
T ss_pred             cCCCceEEEECCcccCCC--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcC-CCEEEEEeChHhCCCCCCCHHHH
Confidence            976 99999999998765  889999999999999999999999999999998766 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+++++|+++++.|++++||+||+|+||+++|+|........ .+...   ...+. ++..+|+|++++++||+++..
T Consensus       362 asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~---~~~~l-~r~g~pedvA~~v~fL~s~~a  436 (454)
T 3u0b_A          362 TTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLAT-REVGR---RLNSL-FQGGQPVDVAELIAYFASPAS  436 (454)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC-----------CHHHH---HSBTT-SSCBCHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhh-HHHHH---hhccc-cCCCCHHHHHHHHHHHhCCcc
Confidence            99999999999999999999999999999999999976542211 11111   12344 678899999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      .++||++|.+|||++|
T Consensus       437 ~~itG~~i~vdGG~~l  452 (454)
T 3u0b_A          437 NAVTGNTIRVCGQAML  452 (454)
T ss_dssp             TTCCSCEEEESSSBSC
T ss_pred             CCCCCcEEEECCcccc
Confidence            9999999999999986

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-43  Score=299.35  Aligned_cols=250  Identities=24%  Similarity=0.368  Sum_probs=208.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh------CCCcEEEEEecCCCHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI------GVGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      ++.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..      ...++.++.+|++|.+++++++
T Consensus        12 ~~~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~   91 (303)
T 1yxm_A           12 APGLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLV   91 (303)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHH
T ss_pred             CcCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHH
Confidence            4557899999999999999999999999999998888887665443333221      1347899999999999999999


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~  162 (264)
                      +++.+.++++|+||||||.....  ++.+.+.++|++.+++|+.++++++++++|.+.+++ .++||++||.. ..+.+.
T Consensus        92 ~~~~~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~-~~~~~~  167 (303)
T 1yxm_A           92 KSTLDTFGKINFLVNNGGGQFLS--PAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIVPT-KAGFPL  167 (303)
T ss_dssp             HHHHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECCCC-TTCCTT
T ss_pred             HHHHHHcCCCCEEEECCCCCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCeEEEEEeec-ccCCCc
Confidence            99999999999999999976543  778899999999999999999999999999765544 58999999998 778888


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ...|+++|+++.+|++.++.|++++||++++|+||++.|++.........+.....+....|. +++.+|+|+|+++++|
T Consensus       168 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~dvA~~i~~l  246 (303)
T 1yxm_A          168 AVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVSSVVCFL  246 (303)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-SSCBCTHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcc-cCCCCHHHHHHHHHHH
Confidence            999999999999999999999999999999999999999953211110011222222333455 7889999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++...+++|+.|.+|||+.+
T Consensus       247 ~~~~~~~~~G~~~~v~gG~~~  267 (303)
T 1yxm_A          247 LSPAASFITGQSVDVDGGRSL  267 (303)
T ss_dssp             HSGGGTTCCSCEEEESTTGGG
T ss_pred             hCcccccCCCcEEEECCCeec
Confidence            998889999999999999764

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=100.00  E-value=1.7e-44  Score=297.46  Aligned_cols=233  Identities=19%  Similarity=0.187  Sum_probs=195.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      |++|||||++|||++++++|+++|++|+++.|+.++..+ +.+... ..++..+     |.++++++++++.+.++++|+
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~-~~~l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~   75 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDE-LEAFAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDV   75 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHH-HHHHHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCE
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCE
Confidence            689999999999999999999999998888887655433 222111 2233333     667788899999999999999


Q ss_pred             EEEcCCCC-CCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           95 MFSNAGIL-SSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        95 lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ||||||+. ...  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||+++
T Consensus        76 lv~nAg~~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~~sK~a~  152 (254)
T 1zmt_A           76 LVSNDIFAPEFQ--PIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGA  152 (254)
T ss_dssp             EEEECCCCCCCC--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHH
T ss_pred             EEECCCcCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEECCcccccCCCCchHHHHHHHHH
Confidence            99999987 433  788899999999999999999999999999998876 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcc---------cCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGL---------ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ++|++.++.|++++||+||+|+||++         +|++...    . ++....+....|. +++.+|||+|+.++||++
T Consensus       153 ~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~----~-~~~~~~~~~~~p~-~~~~~p~dvA~~v~~l~s  226 (254)
T 1zmt_A          153 CTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKT----N-PEHVAHVKKVTAL-QRLGTQKELGELVAFLAS  226 (254)
T ss_dssp             HHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTT----C-HHHHHHHHHHSSS-SSCBCHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCccccc----C-hHHHHHHhccCCC-CCCcCHHHHHHHHHHHhC
Confidence            99999999999999999999999999         7776532    1 1222222233455 788999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      +...+++|++|.+|||+++
T Consensus       227 ~~~~~~tG~~~~vdgG~~~  245 (254)
T 1zmt_A          227 GSCDYLTGQVFWLAGGFPM  245 (254)
T ss_dssp             TSCGGGTTCEEEESTTCCC
T ss_pred             cccCCccCCEEEECCCchh
Confidence            9899999999999999865

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=100.00  E-value=1.1e-43  Score=290.65  Aligned_cols=243  Identities=28%  Similarity=0.419  Sum_probs=203.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++++|++|||||++|||++++++|+++|++|+++.|+.++..+ +.+...  ...++.+|++|.++++++++    .+
T Consensus         2 ~~~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~~--~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 3d3w_A            2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS-LVRECP--GIEPVCVDLGDWEATERALG----SV   74 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHST--TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             ccccCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHcC--CCCEEEEeCCCHHHHHHHHH----Hc
Confidence            356899999999999999999999999999998888887654433 333222  34667999999999988876    56


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.++...|++|
T Consensus        75 ~~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 3d3w_A           75 GPVDLLVNNAAVALLQ--PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCccCCCc--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHH
Confidence            7899999999987543  77888999999999999999999999999999875425899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.|++.++.|++++||++++|+||++.|++.......  +.....+....|. +++.+|+|+|+++++|+++...+
T Consensus       153 K~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  229 (244)
T 3d3w_A          153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSD--PHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCS--TTHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccC--hHHHHHHHhhCCC-CCCcCHHHHHHHHHHHcCccccC
Confidence            99999999999999999999999999999999986533211  1111222233455 78899999999999999987889


Q ss_pred             eeccEEEecCeeecC
Q 041914          250 VTGHDLVVDGGFLIR  264 (264)
Q Consensus       250 ~~G~~i~~dgG~~~~  264 (264)
                      ++|+.|.+|||++++
T Consensus       230 ~~G~~~~v~gG~~~~  244 (244)
T 3d3w_A          230 TTGSTLPVEGGFWAC  244 (244)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CCCCEEEECCCccCC
Confidence            999999999998763

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=100.00  E-value=2.8e-43  Score=286.77  Aligned_cols=230  Identities=23%  Similarity=0.256  Sum_probs=199.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++|++|||||++|||++++++|+++|++|+++.|+.++..+...+..  ...++.++++|++|+++++++++++.+.+++
T Consensus         1 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   80 (235)
T 3l77_A            1 EMKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD   80 (235)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence            47999999999999999999999999998888887665544333322  2357899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|+++  .+++|+++|..+..+.++...|+++|+
T Consensus        81 id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~~~~~~~Y~~sKa  156 (235)
T 3l77_A           81 VDVVVANAGLGYFK--RLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRT--GGLALVTTSDVSARLIPYGGGYVSTKW  156 (235)
T ss_dssp             CSEEEECCCCCCCC--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCGGGSSCCTTCHHHHHHHH
T ss_pred             CCEEEECCcccccc--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--CCcEEEEecchhcccCCCcchHHHHHH
Confidence            99999999987654  88899999999999999999999999999999554  479999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      ++++|++.++  +..+||++|+|+||+++|++.......             +...++.+|||+|++++||+++...+++
T Consensus       157 a~~~~~~~l~--~~~~~i~v~~v~PG~v~T~~~~~~~~~-------------~~~~~~~~p~dva~~v~~l~~~~~~~~~  221 (235)
T 3l77_A          157 AARALVRTFQ--IENPDVRFFELRPGAVDTYFGGSKPGK-------------PKEKGYLKPDEIAEAVRCLLKLPKDVRV  221 (235)
T ss_dssp             HHHHHHHHHH--HHCTTSEEEEEEECSBSSSTTTCCSCC-------------CGGGTCBCHHHHHHHHHHHHTSCTTCCC
T ss_pred             HHHHHHHHHh--hcCCCeEEEEEeCCccccccccccCCc-------------ccccCCCCHHHHHHHHHHHHcCCCCCcc
Confidence            9999999994  446799999999999999987544221             1113678999999999999999999999


Q ss_pred             ccEEEecCeee
Q 041914          252 GHDLVVDGGFL  262 (264)
Q Consensus       252 G~~i~~dgG~~  262 (264)
                      |+.+..|+|..
T Consensus       222 ~~~~~~~~~~~  232 (235)
T 3l77_A          222 EELMLRSVYQR  232 (235)
T ss_dssp             CEEEECCTTSC
T ss_pred             ceEEEeecccC
Confidence            99999999863

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=100.00  E-value=1.4e-43  Score=290.84  Aligned_cols=235  Identities=21%  Similarity=0.316  Sum_probs=191.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||++|||++++++|+++|++|+++.|+.++.. .+.+.+. .++.++++|++|+++++++++++.+.++++|+|
T Consensus         1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~-~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   78 (248)
T 3asu_A            1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQ-ELKDELG-DNLYIAQLDVRNRAAIEEMLASLPAEWCNIDIL   78 (248)
T ss_dssp             CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHHC-TTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEE
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHHhc-CceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            68999999999999999999999999888888765543 3333333 368899999999999999999999999999999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||||+... ..++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.++...|++||+++++
T Consensus        79 vnnAg~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~-~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~  156 (248)
T 3asu_A           79 VNNAGLALG-MEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERN-HGHIINIGSTAGSWPYAGGNVYGATKAFVRQ  156 (248)
T ss_dssp             EECCCCCCC-CSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EECCCcCCC-CCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CceEEEEccchhccCCCCCchHHHHHHHHHH
Confidence            999998642 13778899999999999999999999999999998766 6899999999999999999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccE
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHD  254 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~  254 (264)
                      |++.++.|++++||+||+|+||+++ |++.........+.....+.     .....+|||+|+.++||+++ ..+++|+.
T Consensus       157 ~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~-----~~~~~~p~dvA~~v~~l~s~-~~~~~g~~  230 (248)
T 3asu_A          157 FSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQ-----NTVALTPEDVSEAVWWVSTL-PAHVNINT  230 (248)
T ss_dssp             HHHHHHHHTTTSCCEEEEEEECSBCC---------------------------CCBCHHHHHHHHHHHHHS-CTTCCCCE
T ss_pred             HHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHh-----ccCCCCHHHHHHHHHHHhcC-CccceeeE
Confidence            9999999999999999999999999 99864221100000011111     12346999999999999985 67999999


Q ss_pred             EEecCe
Q 041914          255 LVVDGG  260 (264)
Q Consensus       255 i~~dgG  260 (264)
                      +.++++
T Consensus       231 i~v~~~  236 (248)
T 3asu_A          231 LEMMPV  236 (248)
T ss_dssp             EEECCT
T ss_pred             EEEccc
Confidence            999876

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=100.00  E-value=3.4e-43  Score=296.51  Aligned_cols=250  Identities=22%  Similarity=0.313  Sum_probs=208.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...  ..++.++++|++|.++++++++++.
T Consensus        20 ~~~~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   99 (302)
T 1w6u_A           20 PPNSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELI   99 (302)
T ss_dssp             CTTTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHH
Confidence            34568999999999999999999999999999988888876654433322211  3468999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|.++...++||++||..+..+.++...|
T Consensus       100 ~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y  177 (302)
T 1w6u_A          100 KVAGHPNIVINNAAGNFIS--PTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPS  177 (302)
T ss_dssp             HHTCSCSEEEECCCCCCCS--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHH
T ss_pred             HHcCCCCEEEECCCCCCCC--ccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchh
Confidence            9999999999999986544  77889999999999999999999999999999843326899999999998888999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc-ccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP-LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ++||++++.|++.++.+++++||++++|+||++.|+ +...... . ......+....|. +++.+|+|+|+++++|+++
T Consensus       178 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~-~~~~~~~~~~~p~-~~~~~~~dva~~~~~l~~~  254 (302)
T 1w6u_A          178 ASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-T-GTFEKEMIGRIPC-GRLGTVEELANLAAFLCSD  254 (302)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-T-SHHHHHHHTTCTT-SSCBCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhccc-c-hhhHHHHHhcCCc-CCCCCHHHHHHHHHHHcCC
Confidence            999999999999999999999999999999999998 4433211 1 1111223334566 7889999999999999998


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      ...+++|+.|.+|||+.+
T Consensus       255 ~~~~~~G~~~~v~gg~~~  272 (302)
T 1w6u_A          255 YASWINGAVIKFDGGEEV  272 (302)
T ss_dssp             GGTTCCSCEEEESTTHHH
T ss_pred             cccccCCCEEEECCCeee
Confidence            888999999999999754

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=100.00  E-value=6.2e-44  Score=294.99  Aligned_cols=245  Identities=22%  Similarity=0.293  Sum_probs=193.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh-c
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN-Y   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~-~   89 (264)
                      ++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++++|++|+++++++++++.+. +
T Consensus         2 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~   81 (260)
T 2qq5_A            2 PMNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ   81 (260)
T ss_dssp             TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            46799999999999999999999999999988888876554333222211 246889999999999999999999886 8


Q ss_pred             CCccEEEEcCCCCCC-----CCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           90 GQLDIMFSNAGILSS-----SDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        90 ~~id~lv~~ag~~~~-----~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +++|+||||||....     ...++.+.+.++|++++++|+.+++++++.++|.|.+++ .++||++||..+..+. +..
T Consensus        82 g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~-~~~  159 (260)
T 2qq5_A           82 GRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAG-QGLIVVISSPGSLQYM-FNV  159 (260)
T ss_dssp             TCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGT-CCEEEEECCGGGTSCC-SSH
T ss_pred             CCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcC-CcEEEEEcChhhcCCC-CCC
Confidence            999999999953211     123677888999999999999999999999999998876 7899999999887654 468


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC-CCCCCCCCCCChHHHHHHHHHHh
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE-PQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      .|++||+++++|++.++.|++++||+||+|+||+++|+|................. ...|. ++..+|||+|++++||+
T Consensus       160 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~pe~va~~v~~l~  238 (260)
T 2qq5_A          160 PYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAF-SSAETTELSGKCVVALA  238 (260)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-----------------------CHHHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhh-ccCCCHHHHHHHHHHHh
Confidence            89999999999999999999999999999999999999875432110000000011 11233 45679999999999999


Q ss_pred             CCCC-CCeeccEEEecC
Q 041914          244 CRDS-EFVTGHDLVVDG  259 (264)
Q Consensus       244 s~~~-~~~~G~~i~~dg  259 (264)
                      ++.. .++||++|.+|+
T Consensus       239 s~~~~~~itG~~i~~~~  255 (260)
T 2qq5_A          239 TDPNILSLSGKVLPSCD  255 (260)
T ss_dssp             TCTTGGGGTTCEEEHHH
T ss_pred             cCcccccccceeechhh
Confidence            9876 489999998874

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=100.00  E-value=1.4e-44  Score=306.82  Aligned_cols=249  Identities=20%  Similarity=0.179  Sum_probs=198.0

Q ss_pred             ccCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCch----------hhHHHHHhhhCCC---cEEEEEec----
Q 041914           11 NKLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQD----------ELGRQVATSIGVG---KCHYVHCD----   71 (264)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~~----------~~~~~~~~~~~~~---~~~~~~~D----   71 (264)
                      ++|++|++|||||  ++|||++++++|+++|++|+++.|+..          ...+...+.....   ...++.+|    
T Consensus         5 ~~l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~   84 (315)
T 2o2s_A            5 IDLRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFD   84 (315)
T ss_dssp             CCCTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCS
T ss_pred             ccCCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhcccccccccccccccccc
Confidence            4588999999999  899999999999999999888876431          1111222111111   12344444    


Q ss_pred             --------CC--------CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHH
Q 041914           72 --------VT--------NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHA  135 (264)
Q Consensus        72 --------~s--------~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~  135 (264)
                              ++        |.++++++++++.++++++|+||||||+......++.+.+.++|++.+++|+.+++++++.+
T Consensus        85 ~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~  164 (315)
T 2o2s_A           85 KPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHF  164 (315)
T ss_dssp             STTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred             ccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence                    33        25689999999999999999999999976422347888999999999999999999999999


Q ss_pred             HHHHHcCCCCcEEEEecCCCCCCCCCCC-chhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCC--
Q 041914          136 ARVMVEGGVRGSIVCTASVAGSCGGKRR-TDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMP--  211 (264)
Q Consensus       136 l~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~--  211 (264)
                      +|+|++   .|+||++||..+..+.+++ ..|++||+|+++|+++++.|+++ +||+||+|+||+++|+|........  
T Consensus       165 ~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~  241 (315)
T 2o2s_A          165 GPIMNE---GGSAVTLSYLAAERVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEK  241 (315)
T ss_dssp             STTEEE---EEEEEEEEEGGGTSCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSS
T ss_pred             HHHHhc---CCEEEEEecccccccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccc
Confidence            999975   3799999999999888887 58999999999999999999985 8999999999999999875432111  


Q ss_pred             -h-HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          212 -A-DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       212 -~-~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                       . +...+.+....|. +++.+|||+|+.++||+++...++||++|.+|||+.+
T Consensus       242 ~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~~~  294 (315)
T 2o2s_A          242 SFIDYAIDYSYNNAPL-RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGLHA  294 (315)
T ss_dssp             CHHHHHHHHHHHHSSS-CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             hhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCeee
Confidence             1 1111222223466 7889999999999999999899999999999999865

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=100.00  E-value=1.4e-43  Score=292.16  Aligned_cols=247  Identities=26%  Similarity=0.411  Sum_probs=208.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC-chhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI-QDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.|+ .++..+...+... ..++.++.+|++|+++++++++++.+
T Consensus         2 ~~~l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   81 (258)
T 3afn_B            2 FPDLKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVA   81 (258)
T ss_dssp             CGGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHH
Confidence            346789999999999999999999999999999999888 5444332222211 34788999999999999999999999


Q ss_pred             hcCCccEEEEcCCC-CCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC----CCcEEEEecCCCCCC-CCC
Q 041914           88 NYGQLDIMFSNAGI-LSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG----VRGSIVCTASVAGSC-GGK  161 (264)
Q Consensus        88 ~~~~id~lv~~ag~-~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~----~~~~iv~iss~~~~~-~~~  161 (264)
                      +++++|+||||||. ...  .++.+.+.++|++.+++|+.+++.+++.++|.|.+++    ..++||++||..+.. +.+
T Consensus        82 ~~g~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~  159 (258)
T 3afn_B           82 KFGGIDVLINNAGGLVGR--KPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGP  159 (258)
T ss_dssp             HHSSCSEEEECCCCCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCT
T ss_pred             HcCCCCEEEECCCCcCCc--CccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCC
Confidence            99999999999997 433  3778899999999999999999999999999997532    127999999998887 788


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|++||++++.|++.++.|++++||++++|+||++.|++....    .+.....+....|. +++.+|+|+|+++++
T Consensus       160 ~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~----~~~~~~~~~~~~~~-~~~~~~~dva~~~~~  234 (258)
T 3afn_B          160 GAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADK----TQDVRDRISNGIPM-GRFGTAEEMAPAFLF  234 (258)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTC----CHHHHHHHHTTCTT-CSCBCGGGTHHHHHH
T ss_pred             CchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCccccccccc----CHHHHHHHhccCCC-CcCCCHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999987532    12333333444566 788999999999999


Q ss_pred             HhCCCCC-CeeccEEEecCeeec
Q 041914          242 LACRDSE-FVTGHDLVVDGGFLI  263 (264)
Q Consensus       242 l~s~~~~-~~~G~~i~~dgG~~~  263 (264)
                      ++++... +++|+.|.+|||++.
T Consensus       235 l~~~~~~~~~~G~~~~v~gg~~~  257 (258)
T 3afn_B          235 FASHLASGYITGQVLDINGGQYK  257 (258)
T ss_dssp             HHCHHHHTTCCSEEEEESTTSSC
T ss_pred             HhCcchhccccCCEEeECCCccC
Confidence            9987666 899999999999853

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-43  Score=291.25  Aligned_cols=234  Identities=24%  Similarity=0.365  Sum_probs=196.1

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +...++++|++|||||++|||++++++|+++|++|+++.|+.+.. +   + .  +.+.++ +|+  .++++++++++  
T Consensus        12 ~~~~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~-~---~-~--~~~~~~-~D~--~~~~~~~~~~~--   79 (249)
T 1o5i_A           12 HMELGIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL-K---R-S--GHRYVV-CDL--RKDLDLLFEKV--   79 (249)
T ss_dssp             ----CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-H---H-T--CSEEEE-CCT--TTCHHHHHHHS--
T ss_pred             hHHhccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH-H---h-h--CCeEEE-eeH--HHHHHHHHHHh--
Confidence            345678999999999999999999999999999988888875221 1   1 1  256677 999  44566666554  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                        .++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++ .++||++||..+..+.++...|+
T Consensus        80 --~~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~Y~  154 (249)
T 1o5i_A           80 --KEVDILVLNAGGPKAG--FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSN  154 (249)
T ss_dssp             --CCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHH
T ss_pred             --cCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CcEEEEEcchHhcCCCCCCchHH
Confidence              3899999999986544  788899999999999999999999999999998876 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHh-hcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK-LFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|++++.|++.++.|++++||++|+|+||+++|++.....    +.... .+....|. +++.+|||+|++++||+++.
T Consensus       155 ~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~----~~~~~~~~~~~~p~-~~~~~~~dvA~~i~~l~s~~  229 (249)
T 1o5i_A          155 SARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL----SEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEK  229 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS----CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccc----hhhHHHHHHhcCCC-CCCcCHHHHHHHHHHHcCcc
Confidence            99999999999999999999999999999999999875431    11112 23344566 78999999999999999988


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+.|.+|||+.+
T Consensus       230 ~~~~tG~~~~vdgG~~~  246 (249)
T 1o5i_A          230 ASYLTGQTIVVDGGLSK  246 (249)
T ss_dssp             GTTCCSCEEEESTTCCC
T ss_pred             ccCCCCCEEEECCCccc
Confidence            89999999999999865

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=100.00  E-value=2.8e-44  Score=302.58  Aligned_cols=248  Identities=20%  Similarity=0.194  Sum_probs=197.8

Q ss_pred             cccCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchh----------hHHHHHhhhCCC---cEEEEEec---
Q 041914           10 KNKLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDE----------LGRQVATSIGVG---KCHYVHCD---   71 (264)
Q Consensus        10 ~~~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~----------~~~~~~~~~~~~---~~~~~~~D---   71 (264)
                      .+++++|++|||||+  +|||++++++|+++|++|+++.|+...          ..+.+.+.....   ....+.+|   
T Consensus         3 ~~~l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (297)
T 1d7o_A            3 PIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVF   82 (297)
T ss_dssp             CCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTC
T ss_pred             ccccCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceec
Confidence            456899999999999  999999999999999998888764210          001111110100   12344443   


Q ss_pred             -----CC----C--------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHH
Q 041914           72 -----VT----N--------ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH  134 (264)
Q Consensus        72 -----~s----~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~  134 (264)
                           ++    |        +++++++++++.++++++|+||||||+......++.+.+.++|++.+++|+.+++++++.
T Consensus        83 ~~~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~  162 (297)
T 1d7o_A           83 DNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSH  162 (297)
T ss_dssp             CSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred             cchhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHH
Confidence                 32    2        568999999999999999999999997642234788899999999999999999999999


Q ss_pred             HHHHHHcCCCCcEEEEecCCCCCCCCCCC-chhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCcccccccCCCh
Q 041914          135 AARVMVEGGVRGSIVCTASVAGSCGGKRR-TDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAYGMPA  212 (264)
Q Consensus       135 ~l~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~~~~~  212 (264)
                      ++|+|++   .|+||++||..+..+.+++ ..|++||+|+++|++.++.|+++ +||+||+|+||+++|++.....  ..
T Consensus       163 ~~~~m~~---~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~--~~  237 (297)
T 1d7o_A          163 FLPIMNP---GGASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG--FI  237 (297)
T ss_dssp             HGGGEEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS--HH
T ss_pred             HHHHhcc---CceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc--cc
Confidence            9999975   4799999999999888887 69999999999999999999985 8999999999999999875421  11


Q ss_pred             HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          213 DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++....+....|. +++.+|||+|+.++||+++...+++|++|.+|||+.+
T Consensus       238 ~~~~~~~~~~~p~-~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~~~  287 (297)
T 1d7o_A          238 DTMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             HHHHHHhhccCCC-CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCcee
Confidence            2222222233455 7889999999999999998899999999999999875

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=100.00  E-value=1.1e-44  Score=308.04  Aligned_cols=249  Identities=22%  Similarity=0.255  Sum_probs=168.5

Q ss_pred             ccCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCc-----------hhhHH----------HHHhhhCC-C---
Q 041914           11 NKLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQ-----------DELGR----------QVATSIGV-G---   63 (264)
Q Consensus        11 ~~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~-----------~~~~~----------~~~~~~~~-~---   63 (264)
                      +++++|++|||||  ++|||++++++|+++|++|+++.|+.           +...+          ...+++.. +   
T Consensus         5 ~~l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (319)
T 2ptg_A            5 VDLRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDL   84 (319)
T ss_dssp             CCCTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------
T ss_pred             cccCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccc
Confidence            4588999999999  89999999999999999988887642           11100          11111111 0   


Q ss_pred             -cEEEEEec------------CCC--------HHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHh
Q 041914           64 -KCHYVHCD------------VTN--------ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA  122 (264)
Q Consensus        64 -~~~~~~~D------------~s~--------~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~  122 (264)
                       ...++.+|            ++|        .++++++++++.++++++|+||||||+......++.+.+.++|+++++
T Consensus        85 ~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~  164 (319)
T 2ptg_A           85 VFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVS  164 (319)
T ss_dssp             CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHH
T ss_pred             cccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHh
Confidence             02444444            232        448899999999999999999999997642234788899999999999


Q ss_pred             hHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC-chhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCccc
Q 041914          123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR-TDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLA  200 (264)
Q Consensus       123 ~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~  200 (264)
                      +|+.+++++++.++|+|++   .|+||++||..+..+.+++ ..|++||+|+++|++.++.|+++ +||+||+|+||+++
T Consensus       165 vN~~g~~~l~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~  241 (319)
T 2ptg_A          165 SSSYSFVSLLQHFLPLMKE---GGSALALSYIASEKVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLK  241 (319)
T ss_dssp             HHTHHHHHHHHHHGGGEEE---EEEEEEEEECC------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred             HhhHHHHHHHHHHHHHHhc---CceEEEEeccccccccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCcc
Confidence            9999999999999999976   3799999999999888887 68999999999999999999985 89999999999999


Q ss_pred             CcccccccCCCh----HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          201 TPLTCHAYGMPA----DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       201 t~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |+|.........    +...+.+....|. +++.+|||+|+.++||+++...++||++|.+|||+++
T Consensus       242 T~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~~  307 (319)
T 2ptg_A          242 SRAASAIGKAGDKTFIDLAIDYSEANAPL-QKELESDDVGRAALFLLSPLARAVTGATLYVDNGLHA  307 (319)
T ss_dssp             --------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCTT
T ss_pred             ChhhhhcccccchhhHHHHHHHHhccCCC-CCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCcee
Confidence            998754321101    1111112233466 7899999999999999999899999999999999865

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-43  Score=287.01  Aligned_cols=243  Identities=26%  Similarity=0.413  Sum_probs=204.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +.++++|++|||||++|||++++++|+++|++|+++.|+.++..+. .+...  .+.++.+|++|.++++++++    .+
T Consensus         2 ~~~~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~~--~~~~~~~D~~~~~~~~~~~~----~~   74 (244)
T 1cyd_A            2 KLNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSL-AKECP--GIEPVCVDLGDWDATEKALG----GI   74 (244)
T ss_dssp             -CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHST--TCEEEECCTTCHHHHHHHHT----TC
T ss_pred             ccCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhcc--CCCcEEecCCCHHHHHHHHH----Hc
Confidence            4568899999999999999999999999999988888876554332 22222  35667999999999988876    56


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.++...|++|
T Consensus        75 ~~id~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~s  152 (244)
T 1cyd_A           75 GPVDLLVNNAALVIMQ--PFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSST  152 (244)
T ss_dssp             CCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCCCEEEECCcccCCC--CcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHH
Confidence            7899999999987644  77889999999999999999999999999999875424899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.|++.++.|++++||++++++||++.|++......  .+.....+....|. +++.+|+|+|+++++++++...+
T Consensus       153 K~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~  229 (244)
T 1cyd_A          153 KGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA--DPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRSAS  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC--CHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcccccccc--CHHHHHHHHhcCCc-cCCCCHHHHHHHHHHHhCchhhc
Confidence            9999999999999999999999999999999998653321  12222222233455 78899999999999999988889


Q ss_pred             eeccEEEecCeeecC
Q 041914          250 VTGHDLVVDGGFLIR  264 (264)
Q Consensus       250 ~~G~~i~~dgG~~~~  264 (264)
                      ++|+.|.+|||++++
T Consensus       230 ~~G~~~~v~gG~~~~  244 (244)
T 1cyd_A          230 TSGGGILVDAGYLAS  244 (244)
T ss_dssp             CCSSEEEESTTGGGC
T ss_pred             ccCCEEEECCCccCC
Confidence            999999999998764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=100.00  E-value=9.1e-43  Score=285.24  Aligned_cols=239  Identities=28%  Similarity=0.440  Sum_probs=203.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEE-ecCchhhHHHHHhhh-C-CCcEEE-EEecCCCHHHHHHHHHHHHHhcC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVI-ADIQDELGRQVATSI-G-VGKCHY-VHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~-~~~~~~~~~~~~~~~-~-~~~~~~-~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +|++|||||++|||++++++|+++|++|+++ .|+.++. +.+.+.+ . ..++.. +.+|++|.++++++++++.+.++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   79 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKA-EEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLG   79 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHH-HHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH-HHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcC
Confidence            4799999999999999999999999998887 5554433 3332222 1 234566 89999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+++|
T Consensus        80 ~~d~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK  156 (245)
T 2ph3_A           80 GLDTLVNNAGITRDT--LLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKAR-FGRIVNITSVVGILGNPGQANYVASK  156 (245)
T ss_dssp             CCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCSSBHHHHHHH
T ss_pred             CCCEEEECCCCCCCC--CcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcC-CCEEEEEeChhhccCCCCCcchHHHH
Confidence            999999999987544  778899999999999999999999999999998876 68999999998888888999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      ++++.|++.++.|+++.||++++|+||++.|++....   . +.....+....|. +++.+|+|+|+++++++++...++
T Consensus       157 ~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~-~~~~~~~dva~~~~~l~~~~~~~~  231 (245)
T 2ph3_A          157 AGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERL---P-QEVKEAYLKQIPA-GRFGRPEEVAEAVAFLVSEKAGYI  231 (245)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS---C-HHHHHHHHHTCTT-CSCBCHHHHHHHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhc---C-HHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCcccccc
Confidence            9999999999999999999999999999999987542   1 2222222233455 778999999999999998878899


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                      +|+.+.+|||+.
T Consensus       232 ~G~~~~v~gg~~  243 (245)
T 2ph3_A          232 TGQTLCVDGGLT  243 (245)
T ss_dssp             CSCEEEESTTCS
T ss_pred             cCCEEEECCCCC
Confidence            999999999974

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=100.00  E-value=1.7e-42  Score=288.21  Aligned_cols=247  Identities=28%  Similarity=0.457  Sum_probs=208.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++++|++|||||++|||++++++|+++|++|+++.|+..+..+.+.+.+.  ..++.++++|++|+++++++++++.+
T Consensus        16 ~~~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~   95 (274)
T 1ja9_A           16 SKPLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVS   95 (274)
T ss_dssp             CCTTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            4568999999999999999999999999999988888844443333333321  34688999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDY  166 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y  166 (264)
                      .++++|+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|++   .++||++||..+. .+.++...|
T Consensus        96 ~~~~~d~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~~Y  170 (274)
T 1ja9_A           96 HFGGLDFVMSNSGMEVWC--DELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALY  170 (274)
T ss_dssp             HHSCEEEEECCCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCSCCSCHHH
T ss_pred             HcCCCCEEEECCCCCCCc--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh---CCEEEEEcChHhccCCCCCCchH
Confidence            999999999999987654  7788999999999999999999999999999973   3799999999988 778889999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc---------CCChHHHHhhcCCCCCCCCCCCChHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY---------GMPADEVEKLFEPQTPLEGVVLRAGHVAD  237 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~edva~  237 (264)
                      +++|++++.|++.++.|++++||++++++||++.|++.....         ....++....+....|. +++.+|+|+|+
T Consensus       171 ~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~  249 (274)
T 1ja9_A          171 AGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGR  249 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCC-CCccCHHHHHH
Confidence            999999999999999999999999999999999999865210         11112333333334455 78899999999


Q ss_pred             HHHHHhCCCCCCeeccEEEecCeee
Q 041914          238 AVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       238 ~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++++|+++...+++|+.|.+|||++
T Consensus       250 ~i~~l~~~~~~~~~G~~~~v~gG~~  274 (274)
T 1ja9_A          250 AVSALCQEESEWINGQVIKLTGGGI  274 (274)
T ss_dssp             HHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHHHhCcccccccCcEEEecCCcC
Confidence            9999999888899999999999974

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=5.7e-43  Score=319.23  Aligned_cols=230  Identities=26%  Similarity=0.436  Sum_probs=193.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-hhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ-DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+++||++|||||++|||+++|++|+++|++|++..++. ++..+++.+  ..+++..+.+|++  ++.+++++++.+++
T Consensus       318 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~--~g~~~~~~~~Dv~--~~~~~~~~~~~~~~  393 (604)
T 2et6_A          318 VSLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKA--AGGEAWPDQHDVA--KDSEAIIKNVIDKY  393 (604)
T ss_dssp             CCCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHH--TTCEEEEECCCHH--HHHHHHHHHHHHHH
T ss_pred             cccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHh--cCCeEEEEEcChH--HHHHHHHHHHHHhc
Confidence            468999999999999999999999999999988776533 222222222  1246777788884  45678899999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      |++|+||||||+....  ++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.++...|++|
T Consensus       394 G~iDiLVnNAGi~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IVnisS~ag~~~~~~~~~Y~as  470 (604)
T 2et6_A          394 GTIDILVNNAGILRDR--SFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQ-FGRIINITSTSGIYGNFGQANYSSS  470 (604)
T ss_dssp             SCCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCHHHHSCCTTBHHHHHH
T ss_pred             CCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCCCChhHHHH
Confidence            9999999999987654  788999999999999999999999999999998876 7999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+.+|+++++.|++++||+||+|+||. .|+|......   ++          . ....+|||||+.++||+++... 
T Consensus       471 Kaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~~~~~---~~----------~-~~~~~pe~vA~~v~~L~s~~~~-  534 (604)
T 2et6_A          471 KAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTLSIMR---EQ----------D-KNLYHADQVAPLLVYLGTDDVP-  534 (604)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC-----------------------CCSSCGGGTHHHHHHTTSTTCC-
T ss_pred             HHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCccccccCc---hh----------h-ccCCCHHHHHHHHHHHhCCccC-
Confidence            99999999999999999999999999995 9998643210   00          0 2345899999999999999888 


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      +||++|.+|||+.+
T Consensus       535 itG~~~~vdGG~~~  548 (604)
T 2et6_A          535 VTGETFEIGGGWIG  548 (604)
T ss_dssp             CCSCEEEEETTEEE
T ss_pred             CCCcEEEECCCeeE
Confidence            99999999999864

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=100.00  E-value=9.4e-43  Score=293.73  Aligned_cols=239  Identities=28%  Similarity=0.385  Sum_probs=194.7

Q ss_pred             ccccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHH
Q 041914            5 SMCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus         5 ~~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      +|..+|.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++
T Consensus        21 ~m~~~m~~l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~  100 (301)
T 3tjr_A           21 SMDGFLSGFDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLAD  100 (301)
T ss_dssp             ---CCCCCSTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             cchhHHhccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHH
Confidence            455567779999999999999999999999999999988888887665444333322 3478999999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++.+.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++..++||++||..+..+.++.
T Consensus       101 ~~~~~~g~id~lvnnAg~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~  178 (301)
T 3tjr_A          101 EAFRLLGGVDVVFSNAGIVVAG--PLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGL  178 (301)
T ss_dssp             HHHHHHSSCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTB
T ss_pred             HHHHhCCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCc
Confidence            9999999999999999998654  78899999999999999999999999999999876545899999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHH------HHhhcCCCCCCCCCCCChHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE------VEKLFEPQTPLEGVVLRAGHVAD  237 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~edva~  237 (264)
                      ..|++||+|+++|++.++.|+++.||+|++|+||+++|++...........      ....+ ...+.....++|||+|+
T Consensus       179 ~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pedvA~  257 (301)
T 3tjr_A          179 GTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAF-GPLPTQDESVSADDVAR  257 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC-----------------------CCCHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhc-cccccccCCCCHHHHHH
Confidence            999999999999999999999999999999999999999875421100000      00011 11122245789999999


Q ss_pred             HHHHHhCCC
Q 041914          238 AVLFLACRD  246 (264)
Q Consensus       238 ~~~~l~s~~  246 (264)
                      .++..+..+
T Consensus       258 ~i~~~l~~~  266 (301)
T 3tjr_A          258 LTADAILAN  266 (301)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHhcC
Confidence            999988654

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=100.00  E-value=2.7e-43  Score=321.31  Aligned_cols=230  Identities=26%  Similarity=0.371  Sum_probs=194.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc---------hhhHHHHHhhh-C-CCcEEEEEecCCCHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ---------DELGRQVATSI-G-VGKCHYVHCDVTNECQVK   79 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~   79 (264)
                      +++++|++|||||++|||+++|++|+++|++|++..+..         +.. +...+++ . .++.   .+|++|.++++
T Consensus         4 ~~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~-~~~~~~i~~~g~~~---~~d~~d~~~~~   79 (604)
T 2et6_A            4 VDFKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAA-DVVVDEIVKNGGVA---VADYNNVLDGD   79 (604)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHH-HHHHHHHHHTTCEE---EEECCCTTCHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHH-HHHHHHHHhcCCeE---EEEcCCHHHHH
Confidence            358899999999999999999999999999988876543         222 2222222 1 1222   36888888899


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 041914           80 ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG  159 (264)
Q Consensus        80 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~  159 (264)
                      ++++++.++||++|+||||||+....  ++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+
T Consensus        80 ~~v~~~~~~~G~iDiLVnNAGi~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~-~G~IVnisS~ag~~~  156 (604)
T 2et6_A           80 KIVETAVKNFGTVHVIINNAGILRDA--SMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQK-YGRIVNTSSPAGLYG  156 (604)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC
Confidence            99999999999999999999987654  788999999999999999999999999999998877 799999999999999


Q ss_pred             CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          160 GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       160 ~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      .++...|++||+|+.+|+++++.|++++||+||+|+|| +.|+|.....  . ++.           .+..+|||++..+
T Consensus       157 ~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m~~~~~--~-~~~-----------~~~~~pe~vA~~v  221 (604)
T 2et6_A          157 NFGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRMTESIM--P-PPM-----------LEKLGPEKVAPLV  221 (604)
T ss_dssp             CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHHHHTTS--C-HHH-----------HTTCSHHHHHHHH
T ss_pred             CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCccccccC--C-hhh-----------hccCCHHHHHHHH
Confidence            99999999999999999999999999999999999998 6888864321  1 111           1235899999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeeec
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +||+++. .++||++|.+|||+..
T Consensus       222 ~~L~s~~-~~itG~~~~vdgG~~~  244 (604)
T 2et6_A          222 LYLSSAE-NELTGQFFEVAAGFYA  244 (604)
T ss_dssp             HHHTSSS-CCCCSCEEEEETTEEE
T ss_pred             HHHhCCc-ccCCCCEEEECCCeEE
Confidence            9999988 9999999999999753

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=100.00  E-value=1.1e-41  Score=278.74  Aligned_cols=232  Identities=21%  Similarity=0.277  Sum_probs=203.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-------RMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +|++|||||++|||++++++|+++|+       +|+++.|+.++..+...+... ..++.++.+|++|+++++++++++.
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            68999999999999999999999999       888888876554333222222 2468899999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|+|++++ .++||++||..+..+.++...|
T Consensus        82 ~~~g~id~li~~Ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y  158 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGVGRFG--ALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIY  158 (244)
T ss_dssp             HHTSCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHH
T ss_pred             HhCCCCCEEEEcCCcCCcC--ccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC-CCEEEEEecchhcCCCCCCchh
Confidence            9999999999999987554  788899999999999999999999999999998766 7899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++||++++.|++.++.|++++||++++|+||++.|++......   +.           ..++.+|+|+|+.+++++++.
T Consensus       159 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~-----------~~~~~~~~dva~~~~~l~~~~  224 (244)
T 2bd0_A          159 CMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD---EM-----------QALMMMPEDIAAPVVQAYLQP  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS---TT-----------GGGSBCHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc---cc-----------cccCCCHHHHHHHHHHHHhCC
Confidence            9999999999999999999999999999999999998754211   00           136789999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ..+++|+++..|+|..+
T Consensus       225 ~~~~~g~~~~~~~~~~~  241 (244)
T 2bd0_A          225 SRTVVEEIILRPTSGDI  241 (244)
T ss_dssp             TTEEEEEEEEEETTCCC
T ss_pred             ccccchheEEecccccc
Confidence            99999999999998754

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=100.00  E-value=7.1e-43  Score=285.53  Aligned_cols=222  Identities=15%  Similarity=0.132  Sum_probs=195.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--C
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--G   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~   90 (264)
                      .++|++|||||++|||++++++|+++|++|+++.|+.++..         ....++++|++|+++++++++++.+.+  +
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g   75 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA---------SASVIVKMTDSFTEQADQVTAEVGKLLGDQ   75 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS---------SEEEECCCCSCHHHHHHHHHHHHHHHHTTC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc---------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            46899999999999999999999999999998888765431         135778999999999999999999999  7


Q ss_pred             CccEEEEcCCCCCCCCCCc-cCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           91 QLDIMFSNAGILSSSDQTV-LDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      ++|+||||||+....  ++ .+.+.++|++.+++|+.+++.+++.++|.|++   .++||++||..+..+.++...|++|
T Consensus        76 ~iD~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~as  150 (241)
T 1dhr_A           76 KVDAILCVAGGWAGG--NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMA  150 (241)
T ss_dssp             CEEEEEECCCCCCCB--CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHH
T ss_pred             CCCEEEEcccccCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhcc---CCEEEEECCHHHccCCCCchHHHHH
Confidence            999999999987643  56 77889999999999999999999999999965   4799999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          170 KHAVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       170 K~al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      |++++.|++.++.|++  ++||+||+|+||+++|++.......            .+. .+..+|||+|+.+++++++..
T Consensus       151 K~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~~~------------~~~-~~~~~~~~vA~~v~~l~~~~~  217 (241)
T 1dhr_A          151 KGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMPE------------ADF-SSWTPLEFLVETFHDWITGNK  217 (241)
T ss_dssp             HHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHSTT------------SCG-GGSEEHHHHHHHHHHHHTTTT
T ss_pred             HHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccCcc------------hhh-ccCCCHHHHHHHHHHHhcCCC
Confidence            9999999999999999  8999999999999999986432110            011 345689999999999999999


Q ss_pred             CCeeccEEEecCee
Q 041914          248 EFVTGHDLVVDGGF  261 (264)
Q Consensus       248 ~~~~G~~i~~dgG~  261 (264)
                      .+++|+.|.+|||.
T Consensus       218 ~~~~G~~~~v~g~~  231 (241)
T 1dhr_A          218 RPNSGSLIQVVTTD  231 (241)
T ss_dssp             CCCTTCEEEEEEET
T ss_pred             cCccceEEEEeCCC
Confidence            99999999999985

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=100.00  E-value=4.2e-42  Score=279.06  Aligned_cols=224  Identities=18%  Similarity=0.225  Sum_probs=183.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||++|||++++++|+++|++|+++.|+.++..+ +.+.+ ..++.++.+|++|.++++++++++.+.   .|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~---~d~l   76 (230)
T 3guy_A            2 SLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLST-VTNCL-SNNVGYRARDLASHQEVEQLFEQLDSI---PSTV   76 (230)
T ss_dssp             -CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHH-HHHTC-SSCCCEEECCTTCHHHHHHHHHSCSSC---CSEE
T ss_pred             CEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHHH-hhccCeEeecCCCHHHHHHHHHHHhhc---CCEE
Confidence            689999999999999999999999998888887665543 33333 346789999999999999999877543   4999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|.+++  ++||++||..+..+.++...|++||+|++.
T Consensus        77 v~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~--~~iv~isS~~~~~~~~~~~~Y~asKaa~~~  152 (230)
T 3guy_A           77 VHSAGSGYFG--LLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQP--VNVVMIMSTAAQQPKAQESTYCAVKWAVKG  152 (230)
T ss_dssp             EECCCCCCCS--CGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CEEEEECCGGGTSCCTTCHHHHHHHHHHHH
T ss_pred             EEeCCcCCCC--ccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CeEEEEeecccCCCCCCCchhHHHHHHHHH
Confidence            9999987654  888999999999999999999999999999998765  499999999999999999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC-CCCCCeeccE
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC-RDSEFVTGHD  254 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s-~~~~~~~G~~  254 (264)
                      |++.++.|++++||+||+|+||+++|++.....            ...|. +++.+|||+|+.++++++ +...+++|+.
T Consensus       153 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~------------~~~~~-~~~~~~~dvA~~i~~l~~~~~~~~itg~~  219 (230)
T 3guy_A          153 LIESVRLELKGKPMKIIAVYPGGMATEFWETSG------------KSLDT-SSFMSAEDAALMIHGALANIGNGYVSDIT  219 (230)
T ss_dssp             HHHHHHHHTTTSSCEEEEEEECCC-----------------------------CCCHHHHHHHHHHHCCEETTEEEEEEE
T ss_pred             HHHHHHHHHHhcCeEEEEEECCcccChHHHhcC------------CCCCc-ccCCCHHHHHHHHHHHHhCcCCCCcccee
Confidence            999999999999999999999999999875431            11233 678899999999999987 6788999999


Q ss_pred             EEecCee
Q 041914          255 LVVDGGF  261 (264)
Q Consensus       255 i~~dgG~  261 (264)
                      +..+...
T Consensus       220 ~~~~~~~  226 (230)
T 3guy_A          220 VNREGHH  226 (230)
T ss_dssp             EEC----
T ss_pred             ecCCCCC
Confidence            9988653

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=100.00  E-value=3.3e-42  Score=283.25  Aligned_cols=226  Identities=16%  Similarity=0.179  Sum_probs=196.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ...+..+|++|||||++|||++++++|+++|++|+++.|+.++..           ...+.+|++|.++++++++++.++
T Consensus        16 ~~~~~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~~   84 (251)
T 3orf_A           16 PRGSHMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINSK   84 (251)
T ss_dssp             ------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHTT
T ss_pred             ccccccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHHH
Confidence            344556899999999999999999999999999999988876531           135789999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+.... .++.+.+.++|++.+++|+.+++++++.++|.|++   .|+||++||..+..+.++...|++
T Consensus        85 ~g~iD~li~~Ag~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~  160 (251)
T 3orf_A           85 SIKVDTFVCAAGGWSGG-NASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ---GGLFVLTGASAALNRTSGMIAYGA  160 (251)
T ss_dssp             TCCEEEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHH
T ss_pred             cCCCCEEEECCccCCCC-CcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc---CCEEEEEechhhccCCCCCchhHH
Confidence            99999999999987654 24677889999999999999999999999999976   479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC-
Q 041914          169 SKHAVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR-  245 (264)
Q Consensus       169 sK~al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~-  245 (264)
                      ||+|++.|++.++.|++  ++||+||+|+||+++|++.....            ...+. +++.+|+|+|+.+++|+++ 
T Consensus       161 sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~~------------~~~~~-~~~~~~~dva~~i~~l~~~~  227 (251)
T 3orf_A          161 TKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYM------------SDANF-DDWTPLSEVAEKLFEWSTNS  227 (251)
T ss_dssp             HHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHHC------------TTSCG-GGSBCHHHHHHHHHHHHHCG
T ss_pred             HHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhhc------------ccccc-cccCCHHHHHHHHHHHhcCc
Confidence            99999999999999987  88999999999999999864332            22233 6788999999999999998 


Q ss_pred             CCCCeeccEEEecCeee
Q 041914          246 DSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~  262 (264)
                      ...+++|+.|.+++|..
T Consensus       228 ~~~~~tG~~i~v~~g~~  244 (251)
T 3orf_A          228 DSRPTNGSLVKFETKSK  244 (251)
T ss_dssp             GGCCCTTCEEEEEEETT
T ss_pred             cccCCcceEEEEecCCc
Confidence            88999999999998753

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-42  Score=281.01  Aligned_cols=222  Identities=18%  Similarity=0.158  Sum_probs=194.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      ++|++|||||++|||++++++|+++|++|+++.|+.++..         ....++.+|++|.++++++++++.+.+  ++
T Consensus         2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~   72 (236)
T 1ooe_A            2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQ   72 (236)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc---------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCC
Confidence            5799999999999999999999999999999888766431         135678999999999999999999998  79


Q ss_pred             ccEEEEcCCCCCCCCCCc-cCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTV-LDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      +|+||||||+....  ++ .+.+.++|++.+++|+.+++.+++.++|.|++   .++||++||..+..+.++...|++||
T Consensus        73 id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~isS~~~~~~~~~~~~Y~~sK  147 (236)
T 1ooe_A           73 VDGVFCVAGGWAGG--SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAK  147 (236)
T ss_dssp             EEEEEECCCCCCCB--CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHH
T ss_pred             CCEEEECCcccCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhcc---CCEEEEECchhhccCCCCcHHHHHHH
Confidence            99999999987643  56 67889999999999999999999999999965   47999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHH-HHhCCCC
Q 041914          171 HAVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL-FLACRDS  247 (264)
Q Consensus       171 ~al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~-~l~s~~~  247 (264)
                      +++++|++.++.|++  ++||+||+|+||+++|++......            ..+. .+..+|||+|+.++ +|+++..
T Consensus       148 ~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~------------~~~~-~~~~~~~dvA~~i~~~l~s~~~  214 (236)
T 1ooe_A          148 AAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------------NADH-SSWTPLSFISEHLLKWTTETSS  214 (236)
T ss_dssp             HHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------------TCCG-GGCBCHHHHHHHHHHHHHCGGG
T ss_pred             HHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcCC------------Cccc-cccCCHHHHHHHHHHHHcCCCc
Confidence            999999999999998  899999999999999998643211            0111 34568999999998 5558889


Q ss_pred             CCeeccEEEecCeee
Q 041914          248 EFVTGHDLVVDGGFL  262 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~  262 (264)
                      .+++|+.|.+|||..
T Consensus       215 ~~~~G~~~~v~gg~~  229 (236)
T 1ooe_A          215 RPSSGALLKITTENG  229 (236)
T ss_dssp             CCCTTCEEEEEEETT
T ss_pred             ccccccEEEEecCCC
Confidence            999999999999853

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=100.00  E-value=4.3e-42  Score=291.59  Aligned_cols=232  Identities=23%  Similarity=0.360  Sum_probs=194.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec---------CchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD---------IQDELGRQVATSIGVGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~   81 (264)
                      ++++||++|||||++|||++++++|+++|++|+++.+         +.++..+...+....+.  ...+|+++.++++++
T Consensus         5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~~~~D~~~~~~~~~~   82 (319)
T 1gz6_A            5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--KAVANYDSVEAGEKL   82 (319)
T ss_dssp             CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--EEEEECCCGGGHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--eEEEeCCCHHHHHHH
Confidence            4688999999999999999999999999999887643         33333322222222221  235899999999999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      ++++.+.++++|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|+|++++ .++||++||..+..+.+
T Consensus        83 ~~~~~~~~g~iD~lVnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~-~grIV~vsS~~~~~~~~  159 (319)
T 1gz6_A           83 VKTALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF  159 (319)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHcCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCEEEEECChhhccCCC
Confidence            999999999999999999987654  688899999999999999999999999999998876 78999999998888888


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      ++..|++||++++.|++.++.|++++||+||+|+||++ |++.....  + +..           .+..+|+|+|+.++|
T Consensus       160 ~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~~~~--~-~~~-----------~~~~~p~dvA~~~~~  224 (319)
T 1gz6_A          160 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTETVM--P-EDL-----------VEALKPEYVAPLVLW  224 (319)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTGGGS--C-HHH-----------HHHSCGGGTHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccccccC--C-hhh-----------hccCCHHHHHHHHHH
Confidence            99999999999999999999999999999999999998 87754321  1 111           123589999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeec
Q 041914          242 LACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |+++ ..+++|++|.+|||+..
T Consensus       225 l~s~-~~~~tG~~~~v~GG~~~  245 (319)
T 1gz6_A          225 LCHE-SCEENGGLFEVGAGWIG  245 (319)
T ss_dssp             HTST-TCCCCSCEEEEETTEEE
T ss_pred             HhCc-hhhcCCCEEEECCCeEE
Confidence            9986 46899999999999864

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=1.3e-40  Score=277.84  Aligned_cols=245  Identities=22%  Similarity=0.349  Sum_probs=199.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .|.++++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++.+|++|+++++++++++
T Consensus        26 ~m~~l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~  105 (279)
T 1xg5_A           26 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI  105 (279)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             cccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHH
Confidence            34568999999999999999999999999999988888876554333222211   246889999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-CcEEEEecCCCCC--CCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-RGSIVCTASVAGS--CGGKR  162 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-~~~iv~iss~~~~--~~~~~  162 (264)
                      .+.++++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|++++. .++||++||..+.  .+.++
T Consensus       106 ~~~~g~iD~vi~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~  183 (279)
T 1xg5_A          106 RSQHSGVDICINNAGLARPD--TLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV  183 (279)
T ss_dssp             HHHHCCCSEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG
T ss_pred             HHhCCCCCEEEECCCCCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCC
Confidence            99999999999999987654  7788899999999999999999999999999988652 3899999999987  56777


Q ss_pred             CchhhchHHHHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      ...|+++|++++.|++.++.|++  +.||++|+|+||++.|++...............    .+. .++.+|+|+|++++
T Consensus       184 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~----~~~-~~~~~~~dvA~~i~  258 (279)
T 1xg5_A          184 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT----YEQ-MKCLKPEDVAEAVI  258 (279)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH----HC----CBCHHHHHHHHH
T ss_pred             CchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhhh----ccc-ccCCCHHHHHHHHH
Confidence            88999999999999999999998  889999999999999998543322222221111    122 46789999999999


Q ss_pred             HHhCCCCCCeeccEEEecCe
Q 041914          241 FLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG  260 (264)
                      +++++...+.+|+....++|
T Consensus       259 ~l~~~~~~~~~g~i~i~~~~  278 (279)
T 1xg5_A          259 YVLSTPAHIQIGDIQMRPTG  278 (279)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhcCCcceEeeeEEEccCC
Confidence            99998888888865554443

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=100.00  E-value=3.1e-42  Score=289.30  Aligned_cols=232  Identities=21%  Similarity=0.249  Sum_probs=185.3

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..+++++||++|||||++|||++++++|+++|++|+++.|+.++..+.. +.+ ..++.++++|++|.++++++++++  
T Consensus         9 ~~~~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dl~d~~~v~~~~~~~--   84 (291)
T 3rd5_A            9 ADLPSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAA-RTM-AGQVEVRELDLQDLSSVRRFADGV--   84 (291)
T ss_dssp             GGCCCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-TTS-SSEEEEEECCTTCHHHHHHHHHTC--
T ss_pred             hhccCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHh-cCCeeEEEcCCCCHHHHHHHHHhc--
Confidence            3567899999999999999999999999999999888888766554433 333 347899999999999999998866  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC--------
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG--------  159 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~--------  159 (264)
                        +++|+||||||+..+    ..+.+.++|++++++|+.+++++++.++|.|.+     +||++||..+..+        
T Consensus        85 --~~iD~lv~nAg~~~~----~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~-----riv~isS~~~~~~~~~~~~~~  153 (291)
T 3rd5_A           85 --SGADVLINNAGIMAV----PYALTVDGFESQIGTNHLGHFALTNLLLPRLTD-----RVVTVSSMAHWPGRINLEDLN  153 (291)
T ss_dssp             --CCEEEEEECCCCCSC----CCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEE-----EEEEECCGGGTTCCCCSSCTT
T ss_pred             --CCCCEEEECCcCCCC----cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----heeEeechhhccCCCCccccc
Confidence              689999999998643    345678899999999999999999999998853     8999999988754        


Q ss_pred             -----CCCCchhhchHHHHHHHHHHHHHHhCcCC--ceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCC-C
Q 041914          160 -----GKRRTDYHMSKHAVIGLVRSASVQLGVHG--IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL-R  231 (264)
Q Consensus       160 -----~~~~~~y~~sK~al~~~~~~la~e~~~~~--i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  231 (264)
                           .++...|++||++++.|++.++.|++++|  |++|+|+||+++|++......    .....+ ...+. +++. +
T Consensus       154 ~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~----~~~~~~-~~~~~-~~~~~~  227 (291)
T 3rd5_A          154 WRSRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGR----KLGDAL-MSAAT-RVVATD  227 (291)
T ss_dssp             CSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC--------------------------CHH
T ss_pred             ccccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccch----HHHHHH-HHHHH-HHHhCC
Confidence                 34567899999999999999999999887  999999999999999865421    111111 12344 4444 5


Q ss_pred             hHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          232 AGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       232 ~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |||+|+.++||+++  ++++|+.|.+|||+.
T Consensus       228 ~~~~A~~~~~l~~~--~~~~G~~~~vdgG~~  256 (291)
T 3rd5_A          228 ADFGARQTLYAASQ--DLPGDSFVGPRFGYL  256 (291)
T ss_dssp             HHHHHHHHHHHHHS--CCCTTCEEEETTSSS
T ss_pred             HHHHHHHHHHHHcC--CCCCCceeCCccccc
Confidence            99999999999987  499999999999975

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=100.00  E-value=3.9e-41  Score=274.92  Aligned_cols=230  Identities=30%  Similarity=0.399  Sum_probs=196.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|++|||||++|||++++++|+++|++|+++.|+.+ .          .++.++++|++|+++++++++++ +.++++|+
T Consensus         2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~-~~~~~~d~   69 (242)
T 1uay_A            2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARA-QEEAPLFA   69 (242)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHH-HHHSCEEE
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHH-HhhCCceE
Confidence            689999999999999999999999999888888765 1          13578999999999999999999 88899999


Q ss_pred             EEEcCCCCCCCCCCccCC----CHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-----CCcEEEEecCCCCCCCCCCCch
Q 041914           95 MFSNAGILSSSDQTVLDL----DFSAFDRLFAINVRGMAACVKHAARVMVEGG-----VRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~----~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-----~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      +|||||.....  ++.+.    +.++|++.+++|+.+++.+++.++|.|.+++     ..++||++||..+..+.++...
T Consensus        70 li~~ag~~~~~--~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~  147 (242)
T 1uay_A           70 VVSAAGVGLAE--KILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAA  147 (242)
T ss_dssp             EEECCCCCCCC--CSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHH
T ss_pred             EEEcccccCcc--cccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCch
Confidence            99999987654  44443    4559999999999999999999999998743     1359999999999988899999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+++|++++.|++.++.|++++||++++|+||++.|++....   . +.....+....|..+++.+|+|+|+++++++++
T Consensus       148 Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~  223 (242)
T 1uay_A          148 YAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL---P-EKAKASLAAQVPFPPRLGRPEEYAALVLHILEN  223 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS---C-HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhcc---c-hhHHHHHHhhCCCcccCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999999999987542   1 222233334445436788999999999999976


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                        .+++|+.|.+|||++++
T Consensus       224 --~~~~G~~~~v~gG~~~~  240 (242)
T 1uay_A          224 --PMLNGEVVRLDGALRMA  240 (242)
T ss_dssp             --TTCCSCEEEESTTCCCC
T ss_pred             --CCCCCcEEEEcCCeecC
Confidence              78999999999999864

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=100.00  E-value=2.3e-41  Score=278.60  Aligned_cols=233  Identities=20%  Similarity=0.232  Sum_probs=191.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCH-HHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNE-CQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~-~~~~~~~~~~~~~   88 (264)
                      ++++|++|||||++|||++++++|+++|++ |+++.|+.. +..+.+.+.....++.++.+|++|+ ++++++++++.+.
T Consensus         2 ~l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   81 (254)
T 1sby_A            2 DLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQ   81 (254)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred             CCCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHh
Confidence            578999999999999999999999999997 788887754 2333443333334788999999998 9999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|+||||||+..          .++|++.+++|+.+++++++.++|.|.+++  ..++||++||..+..+.++...|
T Consensus        82 ~g~id~lv~~Ag~~~----------~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y  151 (254)
T 1sby_A           82 LKTVDILINGAGILD----------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVY  151 (254)
T ss_dssp             HSCCCEEEECCCCCC----------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHH
T ss_pred             cCCCCEEEECCccCC----------HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHH
Confidence            999999999999742          246899999999999999999999997652  14799999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ++||++++.|++.++.+++++||++|+|+||+++|++........  .+.... +....|    +.+|||+|+.++++++
T Consensus       152 ~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~dvA~~i~~~~~  226 (254)
T 1sby_A          152 SASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAE-LLLSHP----TQTSEQCGQNFVKAIE  226 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHH-HHTTSC----CEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHH-HHhcCC----CCCHHHHHHHHHHHHH
Confidence            999999999999999999888999999999999999875431100  111111 112223    3489999999999985


Q ss_pred             CCCCCeeccEEEecCeee
Q 041914          245 RDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~  262 (264)
                         .+.+|+.+.+|||+.
T Consensus       227 ---~~~~G~~~~v~gG~~  241 (254)
T 1sby_A          227 ---ANKNGAIWKLDLGTL  241 (254)
T ss_dssp             ---HCCTTCEEEEETTEE
T ss_pred             ---cCCCCCEEEEeCCce
Confidence               478999999999964

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=100.00  E-value=6.4e-41  Score=279.94  Aligned_cols=238  Identities=22%  Similarity=0.277  Sum_probs=195.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +.+|++|||||++|||++++++|+++|++|+++.|+.++..+.. +.. ..++.++++|++|.++++++++++.++++++
T Consensus         3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   80 (281)
T 3m1a_A            3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLV-AAY-PDRAEAISLDVTDGERIDVVAADVLARYGRV   80 (281)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHH-HHC-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-Hhc-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCC
Confidence            56899999999999999999999999999998888876654433 322 2368999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|++||++
T Consensus        81 d~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a  157 (281)
T 3m1a_A           81 DVLVNNAGRTQVG--AFEETTERELRDLFELHVFGPARLTRALLPQMRERG-SGSVVNISSFGGQLSFAGFSAYSATKAA  157 (281)
T ss_dssp             SEEEECCCCEEEC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHHHHHHH
T ss_pred             CEEEECCCcCCCC--ChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCEEEEEcCccccCCCCCchHHHHHHHH
Confidence            9999999987654  788899999999999999999999999999999877 7999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHHH--HhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEV--EKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ++.|++.++.|++++||++|+|+||++.|++......       ......  ........+. +++.+|+|+|+++++++
T Consensus       158 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~dva~a~~~~~  236 (281)
T 3m1a_A          158 LEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDG-SQPGDPAKAAAAIRLAL  236 (281)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC------CBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccC-CCCCCHHHHHHHHHHHH
Confidence            9999999999999999999999999999998653211       001111  1111222344 67889999999999999


Q ss_pred             CCCCCCeeccEEEecC
Q 041914          244 CRDSEFVTGHDLVVDG  259 (264)
Q Consensus       244 s~~~~~~~G~~i~~dg  259 (264)
                      +++.   .|..+.+.+
T Consensus       237 ~~~~---~~~~~~l~s  249 (281)
T 3m1a_A          237 DTEK---TPLRLALGG  249 (281)
T ss_dssp             HSSS---CCSEEEESH
T ss_pred             hCCC---CCeEEecCc
Confidence            7553   345555544

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=100.00  E-value=2.6e-40  Score=269.03  Aligned_cols=226  Identities=26%  Similarity=0.328  Sum_probs=187.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|++|||||++|||++++++|+++|++|+++.|+.++.. .+.+...  ++.++.+|++|.++++++++++.+.++++|
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~-~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQ-ALAAELE--GALPLPGDVREEGDWARAVAAMEEAFGELS   80 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH-HHHHHST--TCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHHHhh--hceEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            4689999999999999999999999999888888765443 3333332  578899999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.++...|+++|+++
T Consensus        81 ~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y~~sK~a~  157 (234)
T 2ehd_A           81 ALVNNAGVGVMK--PVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRG-GGTIVNVGSLAGKNPFKGGAAYNASKFGL  157 (234)
T ss_dssp             EEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCTTTTSCCTTCHHHHHHHHHH
T ss_pred             EEEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CcEEEEECCchhcCCCCCCchhhHHHHHH
Confidence            999999987544  788899999999999999999999999999999876 78999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeecc
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH  253 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~  253 (264)
                      +.|++.++.|++++||++++|+||+++|++....     +.   .+        ...+|+|+|+.+++++++...+++|+
T Consensus       158 ~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-----~~---~~--------~~~~~~dvA~~~~~l~~~~~~~~~g~  221 (234)
T 2ehd_A          158 LGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-----PG---QA--------WKLKPEDVAQAVLFALEMPGHAMVSE  221 (234)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEECC--------------------------------CCHHHHHHHHHHHHHSCCSSCCCE
T ss_pred             HHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-----cc---cc--------CCCCHHHHHHHHHHHhCCCcccccce
Confidence            9999999999999999999999999999976421     00   01        13599999999999999889999999


Q ss_pred             EEEecCee
Q 041914          254 DLVVDGGF  261 (264)
Q Consensus       254 ~i~~dgG~  261 (264)
                      .+..+++.
T Consensus       222 ~~~~~~~~  229 (234)
T 2ehd_A          222 IELRPTRP  229 (234)
T ss_dssp             EECCC---
T ss_pred             EEEeecCC
Confidence            87666543

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=100.00  E-value=1.3e-40  Score=282.79  Aligned_cols=235  Identities=23%  Similarity=0.287  Sum_probs=187.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      |.++.+|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++.+|++|.++++++++++.
T Consensus         3 m~~l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~   82 (319)
T 3ioy_A            3 LKDFAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVE   82 (319)
T ss_dssp             CCCCTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred             ccCCCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHH
Confidence            4568899999999999999999999999999988888887665444333221   1278999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----CCCcEEEEecCCCCCCCCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-----GVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~~~~iv~iss~~~~~~~~  161 (264)
                      +.++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|.|.++     ...|+||++||..+..+.+
T Consensus        83 ~~~g~id~lv~nAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~  160 (319)
T 3ioy_A           83 ARFGPVSILCNNAGVNLFQ--PIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAG  160 (319)
T ss_dssp             HHTCCEEEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCS
T ss_pred             HhCCCCCEEEECCCcCCCC--CcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCC
Confidence            9999999999999987654  88999999999999999999999999999999864     1268999999999999999


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHh--------hcCCCCCCCCCCCChH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK--------LFEPQTPLEGVVLRAG  233 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~e  233 (264)
                      +...|++||+|+++|++.++.|+++.||+|++|+||+|+|++........ .....        ......+.....++||
T Consensus       161 ~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~pe  239 (319)
T 3ioy_A          161 SPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRP-DALKGEVKPVDKTAVERLAGVHEFGMEPD  239 (319)
T ss_dssp             SSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC------------------------------CCGGGSSBCHH
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCc-hhhcccccchhHHHHHHHHHhhhcCCCHH
Confidence            99999999999999999999999999999999999999999876432111 00000        0001111111237999


Q ss_pred             HHHHHHHHHhCCCC
Q 041914          234 HVADAVLFLACRDS  247 (264)
Q Consensus       234 dva~~~~~l~s~~~  247 (264)
                      |+|+.++..+....
T Consensus       240 ~vA~~~~~al~~~~  253 (319)
T 3ioy_A          240 VIGARVIEAMKANR  253 (319)
T ss_dssp             HHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHcCC
Confidence            99999999886543

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=100.00  E-value=7.2e-42  Score=292.38  Aligned_cols=244  Identities=11%  Similarity=-0.018  Sum_probs=198.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCchhhH-----------HHHHhhh--CCCcEEEEEecCCCHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFAD-HGARMIVIADIQDELG-----------RQVATSI--GVGKCHYVHCDVTNECQ   77 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~~~~-----------~~~~~~~--~~~~~~~~~~D~s~~~~   77 (264)
                      ...+|++|||||++|||+++++.|++ .|++|+++.++.+...           +.+.+..  ...++..+.+|++|+++
T Consensus        44 ~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~  123 (405)
T 3zu3_A           44 ANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEI  123 (405)
T ss_dssp             TTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred             CCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence            35799999999999999999999999 9999888877654321           1122121  23468899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCC-----------CCCCc---------------------cCCCHHHHHHHHhhHH
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSS-----------SDQTV---------------------LDLDFSAFDRLFAINV  125 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~  125 (264)
                      ++++++++.+.+|++|+||||||....           ...++                     .+.+.++|++++++|.
T Consensus       124 v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~  203 (405)
T 3zu3_A          124 KQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMG  203 (405)
T ss_dssp             HHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhc
Confidence            999999999999999999999997510           11244                     7789999999999999


Q ss_pred             HHHH-HHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC--chhhchHHHHHHHHHHHHHHhCcC-CceEEEeeCCcccC
Q 041914          126 RGMA-ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--TDYHMSKHAVIGLVRSASVQLGVH-GIRVNCVSPHGLAT  201 (264)
Q Consensus       126 ~~~~-~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sK~al~~~~~~la~e~~~~-~i~v~~v~pG~v~t  201 (264)
                      .+.| .+++++++.+...+ .|+||++||+.+..+.+.+  ..|++||+++++|+|+++.|++++ |||||+|+||++.|
T Consensus       204 ~~~~~~~~~~~~~~~m~~~-gG~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T  282 (405)
T 3zu3_A          204 GEDWQMWIDALLDAGVLAE-GAQTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVS  282 (405)
T ss_dssp             SHHHHHHHHHHHHHTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCC
T ss_pred             hhHHHHHHHHHHHHhhhhC-CcEEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcC
Confidence            9998 78888776433333 5899999999999888887  999999999999999999999999 99999999999999


Q ss_pred             cccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          202 PLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++......  .+.....+..  |+ ++..+|||+++.+.||+++   ++.|+.+.+|++..+|
T Consensus       283 ~~s~~ip~--~p~y~~~l~~--~m-kr~G~~Ed~a~~i~~L~sd---~l~~~~~~~D~~~~~r  337 (405)
T 3zu3_A          283 QASSAIPM--MPLYLSLLFK--VM-KEKGTHEGCIEQVYSLYKD---SLCGDSPHMDQEGRLR  337 (405)
T ss_dssp             HHHHTSTT--HHHHHHHHHH--HH-HHHTCCCCHHHHHHHHHHH---TTSSSCCCBCTTSCEE
T ss_pred             chhhcCCC--CcHHHHHHHH--HH-hcCCCcHHHHHHHHHHHhc---cccCCCCCcCCCcCCC
Confidence            98765432  1222221111  44 8889999999999999986   6889999999988775

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=3.3e-41  Score=279.70  Aligned_cols=235  Identities=23%  Similarity=0.337  Sum_probs=191.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++|++|||||++|||++++++|+++|++|+++.|+.++..+...+...   ..++.++++|++|+++++++++++.+.+
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   84 (267)
T 2gdz_A            5 VNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF   84 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence            5789999999999999999999999999988888876654333222221   2468899999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCCCchhh
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +++|+||||||+...          ++|++.+++|+.+++.+++.++|.|++++  ..++||++||..+..+.++...|+
T Consensus        85 g~id~lv~~Ag~~~~----------~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~  154 (267)
T 2gdz_A           85 GRLDILVNNAGVNNE----------KNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYC  154 (267)
T ss_dssp             SCCCEEEECCCCCCS----------SSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHH
T ss_pred             CCCCEEEECCCCCCh----------hhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHH
Confidence            999999999997532          36899999999999999999999997642  158999999999999999999999


Q ss_pred             chHHHHHHHHHHH--HHHhCcCCceEEEeeCCcccCcccccccCCChHHHH------hhcCCCCCCCCCCCChHHHHHHH
Q 041914          168 MSKHAVIGLVRSA--SVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE------KLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       168 ~sK~al~~~~~~l--a~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      +||++++.|++++  +.|+++.||+||+|+||+++|++......  .....      +.+....+. .++.+|+|+|+++
T Consensus       155 ~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~dvA~~v  231 (267)
T 2gdz_A          155 ASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEK--EENMGQYIEYKDHIKDMIKY-YGILDPPLIANGL  231 (267)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGC--HHHHGGGGGGHHHHHHHHHH-HCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhcccc--ccccchhhhHHHHHHHHhcc-ccCCCHHHHHHHH
Confidence            9999999999995  68999999999999999999998654311  11100      000000111 2467999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++|+++.  .++|++|.+|||..
T Consensus       232 ~~l~s~~--~~~G~~~~v~gg~~  252 (267)
T 2gdz_A          232 ITLIEDD--ALNGAIMKITTSKG  252 (267)
T ss_dssp             HHHHHCT--TCSSCEEEEETTTE
T ss_pred             HHHhcCc--CCCCcEEEecCCCc
Confidence            9999864  59999999999764

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=100.00  E-value=1.3e-41  Score=311.26  Aligned_cols=232  Identities=23%  Similarity=0.382  Sum_probs=181.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec---------CchhhHHHHHhhh-CCCcEEEEEecCCCHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIAD---------IQDELGRQVATSI-GVGKCHYVHCDVTNECQVK   79 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~---------~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~   79 (264)
                      ..+|+||++|||||++|||+++|++|+++|++|+++.|         +.+.. +...+.+ ..+.  ...+|++|.++++
T Consensus        14 ~~~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~D~~d~~~~~   90 (613)
T 3oml_A           14 KLRYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAA-DIVVDEIRKAGG--EAVADYNSVIDGA   90 (613)
T ss_dssp             -CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CH-HHHHHHHHHTTC--CEEECCCCGGGHH
T ss_pred             ccCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHH-HHHHHHHHHhCC--eEEEEeCCHHHHH
Confidence            55789999999999999999999999999999888766         33322 2222222 2211  1348999999999


Q ss_pred             HHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC
Q 041914           80 ALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG  159 (264)
Q Consensus        80 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~  159 (264)
                      ++++++.+.++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++++ .|+||++||..+..+
T Consensus        91 ~~~~~~~~~~g~iDiLVnnAGi~~~~--~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~-~g~IV~isS~a~~~~  167 (613)
T 3oml_A           91 KVIETAIKAFGRVDILVNNAGILRDR--SLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQN-YGRIIMTSSNSGIYG  167 (613)
T ss_dssp             HHHC----------CEECCCCCCCCC--CSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-CEEEEEECCHHHHHC
T ss_pred             HHHHHHHHHCCCCcEEEECCCCCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCEEEEECCHHHcCC
Confidence            99999999999999999999998654  888999999999999999999999999999999887 799999999999999


Q ss_pred             CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          160 GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       160 ~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      .++...|++||+|+++|+++++.|++++||+||+|+||.+ |+|.....   .+..           .+..+|||+|+.+
T Consensus       168 ~~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~-t~~~~~~~---~~~~-----------~~~~~pedvA~~v  232 (613)
T 3oml_A          168 NFGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAA-SRMTEGIL---PDIL-----------FNELKPKLIAPVV  232 (613)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------CCCC---CHHH-----------HTTCCGGGTHHHH
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCC-Chhhhhcc---chhh-----------hhcCCHHHHHHHH
Confidence            9999999999999999999999999999999999999974 66654321   1111           2335899999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeeec
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +||+++. .++||++|.+|||+..
T Consensus       233 ~~L~s~~-~~~tG~~i~vdGG~~~  255 (613)
T 3oml_A          233 AYLCHES-CEDNGSYIESAAGWAT  255 (613)
T ss_dssp             HHTTSTT-CCCCSCEEEEETTEEE
T ss_pred             HHhcCCC-cCCCceEEEECCCeEE
Confidence            9999988 8999999999999874

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=100.00  E-value=4.4e-40  Score=269.77  Aligned_cols=225  Identities=17%  Similarity=0.183  Sum_probs=188.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG-   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-   90 (264)
                      ++|++|||||++|||++++++|+++|  ++|+++.|+.++.. .+.+. ...++.++.+|++|.++++++++++.+.++ 
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~-~l~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   79 (250)
T 1yo6_A            2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKAT-ELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCH-HHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHH-HHHhc-cCCceEEEEeecCCHHHHHHHHHHHHHhcCC
Confidence            57999999999999999999999999  99888888766553 33332 335789999999999999999999999998 


Q ss_pred             -CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC------CC----CcEEEEecCCCCCCC
Q 041914           91 -QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG------GV----RGSIVCTASVAGSCG  159 (264)
Q Consensus        91 -~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~------~~----~~~iv~iss~~~~~~  159 (264)
                       ++|+||||||+..+ ..++.+.+.++|++.+++|+.+++.+++.++|.|.++      +.    .++||++||..+..+
T Consensus        80 ~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~  158 (250)
T 1yo6_A           80 DGLSLLINNAGVLLS-YGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GCCCEEEECCCCCCC-BCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCCcEEEECCcccCC-CcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccC
Confidence             99999999998762 2377888999999999999999999999999999764      21    479999999998877


Q ss_pred             C-------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCCh
Q 041914          160 G-------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRA  232 (264)
Q Consensus       160 ~-------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (264)
                      .       ++...|++||++++.|++.++.|++++||++++|+||+++|++...                    ....+|
T Consensus       159 ~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~~~~  218 (250)
T 1yo6_A          159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK--------------------NAALTV  218 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC--------------------CCCCCH
Confidence            6       6788999999999999999999999999999999999999997531                    134689


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +|+|+.+++++++...+++|+.+.+|||.
T Consensus       219 ~~~a~~~~~~~~~~~~~~~G~~~~~~g~~  247 (250)
T 1yo6_A          219 EQSTAELISSFNKLDNSHNGRFFMRNLKP  247 (250)
T ss_dssp             HHHHHHHHHHHTTCCGGGTTCEEETTEEE
T ss_pred             HHHHHHHHHHHhcccccCCCeEEEECCcC
Confidence            99999999999988889999999999985

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=100.00  E-value=8.6e-42  Score=294.44  Aligned_cols=244  Identities=11%  Similarity=0.003  Sum_probs=194.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCchhhHH-----------HHHhhh--CCCcEEEEEecCCCHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFAD-HGARMIVIADIQDELGR-----------QVATSI--GVGKCHYVHCDVTNECQVK   79 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~~~~~-----------~~~~~~--~~~~~~~~~~D~s~~~~~~   79 (264)
                      .+|++|||||++|||+++++.|++ .|++|+++.|+.+...+           .+.+..  ...++..+.+|++|+++++
T Consensus        60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~  139 (422)
T 3s8m_A           60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA  139 (422)
T ss_dssp             SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred             CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence            599999999999999999999999 99999888876543221           121211  2347889999999999999


Q ss_pred             HHHHHHHHhc-CCccEEEEcCCCCC-----------CCCCCc---------------------cCCCHHHHHHHHhhHHH
Q 041914           80 ALVDSTVQNY-GQLDIMFSNAGILS-----------SSDQTV---------------------LDLDFSAFDRLFAINVR  126 (264)
Q Consensus        80 ~~~~~~~~~~-~~id~lv~~ag~~~-----------~~~~~~---------------------~~~~~~~~~~~~~~n~~  126 (264)
                      ++++++.+++ |+||+||||||+..           ....++                     .+.+.++|++.+++|..
T Consensus       140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~  219 (422)
T 3s8m_A          140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG  219 (422)
T ss_dssp             HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence            9999999999 99999999999731           011233                     36899999999999999


Q ss_pred             HHH-HHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC--chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcc
Q 041914          127 GMA-ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPL  203 (264)
Q Consensus       127 ~~~-~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  203 (264)
                      +.| .+++++++.+...+ .|+||++||+.+..+.|.+  ..|++||+|+.+|+|+++.|++++|||||+|+||++.|++
T Consensus       220 ~~~~~~~~a~~~~~m~~~-gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~  298 (422)
T 3s8m_A          220 QDWELWIDALEGAGVLAD-GARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQA  298 (422)
T ss_dssp             HHHHHHHHHHHHTTCEEE-EEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTT
T ss_pred             hHHHHHHHHHHHHHHhhC-CCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChh
Confidence            987 88888876543333 5899999999999887766  8999999999999999999999999999999999999999


Q ss_pred             cccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee-ccEEEecCeeecC
Q 041914          204 TCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT-GHDLVVDGGFLIR  264 (264)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~-G~~i~~dgG~~~~  264 (264)
                      ......  .+......  ..|+ +|..+||||++.+.||+++.- |.+ |+...+|++..||
T Consensus       299 ~~~ip~--~~~~~~~~--~~~m-~r~G~pEdva~~v~~L~sd~l-y~~~~~~~~~d~~~~~r  354 (422)
T 3s8m_A          299 SAAIPV--MPLYISMV--YKIM-KEKGLHEGTIEQLDRLFRERL-YRQDGQPAEVDEQNRLR  354 (422)
T ss_dssp             GGGSTH--HHHHHHHH--HHHH-HHTTCCCCHHHHHHHHHHHTT-TCTTCCCCCCCTTSCEE
T ss_pred             hhcCCC--ChHHHHHH--Hhhh-cCCcChHHHHHHHHHHhcchh-hccCCCCcccCCCCCCc
Confidence            865421  11111111  1245 788999999999999998643 665 7776699887665

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=100.00  E-value=3.9e-41  Score=277.55  Aligned_cols=220  Identities=20%  Similarity=0.311  Sum_probs=174.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||++|||++++++|+++|++|+++.|+.++...            .+++|++|.++++++++++   ++++|+|
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~------------~~~~Dl~~~~~v~~~~~~~---~~~id~l   66 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA------------DLSTAEGRKQAIADVLAKC---SKGMDGL   66 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHTTC---TTCCSEE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc------------ccccCCCCHHHHHHHHHHh---CCCCCEE
Confidence            689999999999999999999999999888887654311            1678999999998887733   3799999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC------------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS------------------  157 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~------------------  157 (264)
                      |||||+....         +.|++.+++|+.+++++++.++|.|++++ .++||++||..+.                  
T Consensus        67 v~~Ag~~~~~---------~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~  136 (257)
T 1fjh_A           67 VLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGEE  136 (257)
T ss_dssp             EECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTCH
T ss_pred             EECCCCCCCc---------ccHHHHHHHhhHHHHHHHHHHHHHHhhcC-CcEEEEECChhhhccccccchhhhhhcccch
Confidence            9999986421         12899999999999999999999998876 6899999999987                  


Q ss_pred             ----------CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC-CCCCC
Q 041914          158 ----------CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP-QTPLE  226 (264)
Q Consensus       158 ----------~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~  226 (264)
                                .+.++...|++||++++.|++.++.|++++||+||+|+||++.|++.......  ......... ..|. 
T Consensus       137 ~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--~~~~~~~~~~~~~~-  213 (257)
T 1fjh_A          137 AKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAKFVPPM-  213 (257)
T ss_dssp             HHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCST-
T ss_pred             hhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccc--hhHHHHHHhccccc-
Confidence                      44557789999999999999999999999999999999999999987543111  111111111 3455 


Q ss_pred             CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       227 ~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +++.+|||+|+++++|+++...+++|+.|.+|||+.+
T Consensus       214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG~~~  250 (257)
T 1fjh_A          214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGIDA  250 (257)
T ss_dssp             TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCCccc
Confidence            6889999999999999998888999999999999754

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=100.00  E-value=3.2e-39  Score=267.58  Aligned_cols=232  Identities=18%  Similarity=0.175  Sum_probs=196.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcC---CcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHG---ARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g---~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ...++++|++|||||++|||++++++|+++|   ++|+++.|+.+... .+.+.. ...++.++.+|++|.+++++++++
T Consensus        15 ~~~~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~-~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~   93 (267)
T 1sny_A           15 VPRGSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAK-ELEDLAKNHSNIHILEIDLRNFDAYDKLVAD   93 (267)
T ss_dssp             -----CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCH-HHHHHHHHCTTEEEEECCTTCGGGHHHHHHH
T ss_pred             cccCCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhH-HHHHhhccCCceEEEEecCCChHHHHHHHHH
Confidence            4556889999999999999999999999999   99998888766433 222221 134789999999999999999999


Q ss_pred             HHHhcC--CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC------CC----CcEEEEec
Q 041914           85 TVQNYG--QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG------GV----RGSIVCTA  152 (264)
Q Consensus        85 ~~~~~~--~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~------~~----~~~iv~is  152 (264)
                      +.+.++  ++|+||||||+... ..++.+.+.++|++.+++|+.+++.+++.++|.|.++      +.    .++||++|
T Consensus        94 ~~~~~g~~~id~li~~Ag~~~~-~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~is  172 (267)
T 1sny_A           94 IEGVTKDQGLNVLFNNAGIAPK-SARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMS  172 (267)
T ss_dssp             HHHHHGGGCCSEEEECCCCCCC-CCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEEC
T ss_pred             HHHhcCCCCccEEEECCCcCCC-ccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEe
Confidence            999988  89999999998762 2377889999999999999999999999999999865      21    37999999


Q ss_pred             CCCCCCCCC---CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCC
Q 041914          153 SVAGSCGGK---RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVV  229 (264)
Q Consensus       153 s~~~~~~~~---~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (264)
                      |..+..+.+   +...|+++|++++.|++.++.|++++||++++|+||+++|+|...                    ...
T Consensus       173 S~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------~~~  232 (267)
T 1sny_A          173 SILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------------SAP  232 (267)
T ss_dssp             CGGGCSTTCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT--------------------TCS
T ss_pred             cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC--------------------CCC
Confidence            998877653   778899999999999999999999999999999999999998631                    134


Q ss_pred             CChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .+|+++|+.+++++++....++|+.|.+|||..
T Consensus       233 ~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~  265 (267)
T 1sny_A          233 LDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPL  265 (267)
T ss_dssp             BCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBC
T ss_pred             CCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCc
Confidence            689999999999998888899999999999863

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=100.00  E-value=2.6e-40  Score=270.90  Aligned_cols=225  Identities=20%  Similarity=0.257  Sum_probs=159.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|++|||||++|||++++++|++ |+.|+++.|+.+...+ +.+   ...+.++.+|+++.++ .+.+.+..+.+++
T Consensus         2 ~l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~-~~~---~~~~~~~~~D~~~~~~-~~~~~~~~~~~~~   75 (245)
T 3e9n_A            2 SLKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAA-LAE---IEGVEPIESDIVKEVL-EEGGVDKLKNLDH   75 (245)
T ss_dssp             ----CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHH-HHT---STTEEEEECCHHHHHH-TSSSCGGGTTCSC
T ss_pred             CCCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHH-HHh---hcCCcceecccchHHH-HHHHHHHHHhcCC
Confidence            57899999999999999999999998 8998888877655433 322   2368899999998877 5555555667789


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++.+++|+.+++++++.++|.|++++  |+||++||..+..+.++...|++||+
T Consensus        76 id~lv~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~--g~iv~isS~~~~~~~~~~~~Y~asK~  151 (245)
T 3e9n_A           76 VDTLVHAAAVARDT--TIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS--GCVIYINSGAGNGPHPGNTIYAASKH  151 (245)
T ss_dssp             CSEEEECC------------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEEC----------CHHHHHHHH
T ss_pred             CCEEEECCCcCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC--CeEEEEcCcccccCCCCchHHHHHHH
Confidence            99999999987654  788889999999999999999999999999998754  89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      |++.|++.++.|++++||+||+|+||++.|++.......        .....+. +++.+|+|+|+++++|++...   +
T Consensus       152 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~--------~~~~~~~-~~~~~p~dvA~~i~~l~~~~~---~  219 (245)
T 3e9n_A          152 ALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMDS--------QGTNFRP-EIYIEPKEIANAIRFVIDAGE---T  219 (245)
T ss_dssp             HHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CC-GGGSCHHHHHHHHHHHHTSCT---T
T ss_pred             HHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhhh--------hhccccc-ccCCCHHHHHHHHHHHHcCCC---c
Confidence            999999999999999999999999999999987644211        1111233 678899999999999997653   3


Q ss_pred             ccEEEec
Q 041914          252 GHDLVVD  258 (264)
Q Consensus       252 G~~i~~d  258 (264)
                      |+.+++|
T Consensus       220 ~~~~~i~  226 (245)
T 3e9n_A          220 TQITNVD  226 (245)
T ss_dssp             EEEEEEE
T ss_pred             cceeeeE
Confidence            4555543

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=100.00  E-value=5e-39  Score=267.30  Aligned_cols=223  Identities=23%  Similarity=0.372  Sum_probs=190.0

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ..+.++.+|++|||||++|||++++++|+++|++|+++.|+.+...+...+... ..++.++.+|++|.++++++++++.
T Consensus        24 ~~~~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~  103 (272)
T 1yb1_A           24 KRRKSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVK  103 (272)
T ss_dssp             -CCCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CcccccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHH
Confidence            345678999999999999999999999999999988888876554333322221 2478999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +.++++|+||||||+....  ++.+.+.++|++.+++|+.+++.+++.++|.|.+++ .++||++||..+..+.++...|
T Consensus       104 ~~~g~iD~li~~Ag~~~~~--~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-~~~iv~isS~~~~~~~~~~~~Y  180 (272)
T 1yb1_A          104 AEIGDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAY  180 (272)
T ss_dssp             HHTCCCSEEEECCCCCCCC--CCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHH
T ss_pred             HHCCCCcEEEECCCcCCCc--chhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CCEEEEEechhhcCCCCCchhH
Confidence            9999999999999987654  677888999999999999999999999999998876 7899999999999888888999


Q ss_pred             hchHHHHHHHHHHHHHHhC---cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          167 HMSKHAVIGLVRSASVQLG---VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      +++|++++.|++.++.|++   +.||++++|+||+++|++...    ..          .+. +++.+|+|+|+.+++++
T Consensus       181 ~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----~~----------~~~-~~~~~~~dva~~i~~~~  245 (272)
T 1yb1_A          181 CSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----PS----------TSL-GPTLEPEEVVNRLMHGI  245 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----TH----------HHH-CCCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----cc----------ccc-cCCCCHHHHHHHHHHHH
Confidence            9999999999999999996   679999999999999998531    00          011 56789999999999999


Q ss_pred             CCCCC
Q 041914          244 CRDSE  248 (264)
Q Consensus       244 s~~~~  248 (264)
                      .+...
T Consensus       246 ~~~~~  250 (272)
T 1yb1_A          246 LTEQK  250 (272)
T ss_dssp             HTTCS
T ss_pred             HcCCC
Confidence            75543

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.2e-38  Score=269.40  Aligned_cols=240  Identities=21%  Similarity=0.241  Sum_probs=182.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc----hhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ----DELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ++++|++|||||++|||+++|++|+++|++|+++.|+.    .+..+.+.+..  ...++.++++|++|.++++++++++
T Consensus         2 ~m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~   81 (324)
T 3u9l_A            2 VMSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQI   81 (324)
T ss_dssp             ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHH
Confidence            36689999999999999999999999999988877753    22223333222  1247899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-CCCCCc
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-GGKRRT  164 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~~~~~~  164 (264)
                      .+++|++|+||||||+....  ++.+.+.++|++++++|+.++++++++++|+|++++ .|+||++||..+.. +.++..
T Consensus        82 ~~~~g~iD~lVnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~-~g~iV~isS~~~~~~~~~~~~  158 (324)
T 3u9l_A           82 IGEDGRIDVLIHNAGHMVFG--PAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQK-HGLLIWISSSSSAGGTPPYLA  158 (324)
T ss_dssp             HHHHSCCSEEEECCCCCBCS--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCCSSCH
T ss_pred             HHHcCCCCEEEECCCcCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEEecchhccCCCCcch
Confidence            99999999999999987654  888999999999999999999999999999999877 79999999999884 456778


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-C--h---------------HHHHhhcCCCCCCC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-P--A---------------DEVEKLFEPQTPLE  226 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~--~---------------~~~~~~~~~~~~~~  226 (264)
                      .|++||+|+++|+++++.|+++.||+||+|+||++.|++....... .  .               ++....+....   
T Consensus       159 ~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---  235 (324)
T 3u9l_A          159 PYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKAFAAIV---  235 (324)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHHHHHTS---
T ss_pred             hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHHHHHhc---
Confidence            8999999999999999999999999999999999997764321110 0  0               01111110000   


Q ss_pred             CCCCChHHHHHHHHHHhCCCCCCeeccEEEec
Q 041914          227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVD  258 (264)
Q Consensus       227 ~~~~~~edva~~~~~l~s~~~~~~~G~~i~~d  258 (264)
                      ....+|+|||++++.++.... ......+.++
T Consensus       236 ~~~~~p~~vA~aiv~~~~~~~-~~~~~~~~~g  266 (324)
T 3u9l_A          236 PPDADVSLVADAIVRVVGTAS-GKRPFRVHVD  266 (324)
T ss_dssp             CTTCCTHHHHHHHHHHHTSCT-TCCCSEEEEC
T ss_pred             CCCCCHHHHHHHHHHHhcCCC-CCCCeEEEeC
Confidence            122588999999999986432 1234555554

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-38  Score=269.02  Aligned_cols=224  Identities=21%  Similarity=0.264  Sum_probs=185.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCH-HHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNE-CQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~-~~~~~~~~~~~~   87 (264)
                      ..+++|++|||||++|||++++++|+++|++|++++|+.++..+...+....  .++.++.+|++|. ++++++++.+.+
T Consensus         8 ~~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~   87 (311)
T 3o26_A            8 TVTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKT   87 (311)
T ss_dssp             ----CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             ccCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHH
Confidence            4578999999999999999999999999999999998877665544444332  4789999999997 999999999999


Q ss_pred             hcCCccEEEEcCCCCCCC----------------------------CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHH
Q 041914           88 NYGQLDIMFSNAGILSSS----------------------------DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVM  139 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~----------------------------~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~  139 (264)
                      .++++|+||||||+....                            ..++.+.+.++|++.+++|+.+++++++.++|+|
T Consensus        88 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l  167 (311)
T 3o26_A           88 HFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLL  167 (311)
T ss_dssp             HHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred             hCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhh
Confidence            999999999999987431                            1245677899999999999999999999999999


Q ss_pred             HcCCCCcEEEEecCCCCCCCC-------------------------------------------CCCchhhchHHHHHHH
Q 041914          140 VEGGVRGSIVCTASVAGSCGG-------------------------------------------KRRTDYHMSKHAVIGL  176 (264)
Q Consensus       140 ~~~~~~~~iv~iss~~~~~~~-------------------------------------------~~~~~y~~sK~al~~~  176 (264)
                      ++++ .++||++||..+..+.                                           ++...|++||+|+++|
T Consensus       168 ~~~~-~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~  246 (311)
T 3o26_A          168 QLSD-SPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAY  246 (311)
T ss_dssp             TTSS-SCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHH
T ss_pred             ccCC-CCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHH
Confidence            8876 7899999999886543                                           4567899999999999


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEE
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV  256 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~  256 (264)
                      ++.++.|+++  |+||+|+||++.|+|....                    ...++++.++.+++++.......+|..+.
T Consensus       247 ~~~la~e~~~--i~v~~v~PG~v~T~~~~~~--------------------~~~~~~~~a~~~~~~~~~~~~~~~g~~~~  304 (311)
T 3o26_A          247 TRVLANKIPK--FQVNCVCPGLVKTEMNYGI--------------------GNYTAEEGAEHVVRIALFPDDGPSGFFYD  304 (311)
T ss_dssp             HHHHHHHCTT--SEEEEECCCSBCSGGGTTC--------------------CSBCHHHHHHHHHHHHTCCSSCCCSCEET
T ss_pred             HHHHHhhcCC--ceEEEecCCceecCCcCCC--------------------CCCCHHHHHHHHHHHHhCCCCCCCceEec
Confidence            9999999964  9999999999999986432                    12488999999999987555666666554


Q ss_pred             e
Q 041914          257 V  257 (264)
Q Consensus       257 ~  257 (264)
                      .
T Consensus       305 ~  305 (311)
T 3o26_A          305 C  305 (311)
T ss_dssp             C
T ss_pred             c
Confidence            3

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=100.00  E-value=7.7e-39  Score=272.65  Aligned_cols=236  Identities=22%  Similarity=0.256  Sum_probs=184.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh---HHHHHhhh----CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL---GRQVATSI----GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ++|++|||||++|||++++++|+++|++|+++.|+.++.   .+.+....    ...++.++.+|++|.++++++++++.
T Consensus         1 ~~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~   80 (327)
T 1jtv_A            1 ARTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVT   80 (327)
T ss_dssp             CCEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence            479999999999999999999999999988877654432   22222111    12468899999999999999999883


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                        ++++|+||||||+....  ++.+.+.++|++++++|+.+++++++.++|+|++++ .++||++||..+..+.+....|
T Consensus        81 --~g~iD~lVnnAG~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~-~g~IV~isS~~~~~~~~~~~~Y  155 (327)
T 1jtv_A           81 --EGRVDVLVCNAGLGLLG--PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVY  155 (327)
T ss_dssp             --TSCCSEEEECCCCCCCS--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHH
T ss_pred             --cCCCCEEEECCCcCCCC--chhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCEEEEECCcccccCCCCChHH
Confidence              58999999999987544  788899999999999999999999999999998766 7999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh-------HHHHhh---cCC--CCCCCCC-CCChH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA-------DEVEKL---FEP--QTPLEGV-VLRAG  233 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-------~~~~~~---~~~--~~~~~~~-~~~~e  233 (264)
                      ++||++++.|++.++.|++++||+||+|+||+++|+|.........       +...+.   +..  ..+. ++ ..+||
T Consensus       156 ~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~pe  234 (327)
T 1jtv_A          156 CASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVF-REAAQNPE  234 (327)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHH-HHHCBCHH
T ss_pred             HHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhh-hhcCCCHH
Confidence            9999999999999999999999999999999999999754322100       000000   000  0011 23 35899


Q ss_pred             HHHHHHHHHhCC---CCCCeeccEE
Q 041914          234 HVADAVLFLACR---DSEFVTGHDL  255 (264)
Q Consensus       234 dva~~~~~l~s~---~~~~~~G~~i  255 (264)
                      |+|+.++++++.   ..++++|+.+
T Consensus       235 dvA~~i~~l~~~~~~~~~~~tg~~~  259 (327)
T 1jtv_A          235 EVAEVFLTALRAPKPTLRYFTTERF  259 (327)
T ss_dssp             HHHHHHHHHHHCSSCCSEEESCSTT
T ss_pred             HHHHHHHHHHcCCCCCeEEEeCchH
Confidence            999999999864   3567888754

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=100.00  E-value=6.3e-39  Score=278.70  Aligned_cols=244  Identities=9%  Similarity=0.002  Sum_probs=196.7

Q ss_pred             CCCcEEEEeCCCChhHHH--HHHHHHHcCCcEEEEecCchhh-----------HHHHHhhh--CCCcEEEEEecCCCHHH
Q 041914           13 LEGKVAIITGGASGIGET--TARLFADHGARMIVIADIQDEL-----------GRQVATSI--GVGKCHYVHCDVTNECQ   77 (264)
Q Consensus        13 l~~k~vlItGas~giG~~--ia~~l~~~g~~v~~~~~~~~~~-----------~~~~~~~~--~~~~~~~~~~D~s~~~~   77 (264)
                      ..+|++|||||++|||++  +++.|+++|++|+++.|+....           .+.+.+..  ...++..+.+|++|.++
T Consensus        58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~  137 (418)
T 4eue_A           58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNET  137 (418)
T ss_dssp             CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHH
Confidence            689999999999999999  9999999999998888764331           12222222  23468899999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCC-----------CCCCc---------------------cCCCHHHHHHHHhhHH
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSS-----------SDQTV---------------------LDLDFSAFDRLFAINV  125 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~  125 (264)
                      ++++++++.+++|++|+||||||....           ...++                     .+.+.++|++.+++|.
T Consensus       138 v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~  217 (418)
T 4eue_A          138 KDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMG  217 (418)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhh
Confidence            999999999999999999999997410           11133                     4679999999999999


Q ss_pred             HHHH-HHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC--chhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccC
Q 041914          126 RGMA-ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR--TDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLAT  201 (264)
Q Consensus       126 ~~~~-~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~--~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t  201 (264)
                      .+.+ .+++.+++.+...+ .|+||++||+.+..+.|.+  ..|++||+|+++|+++++.|+++ +|||||+|+||++.|
T Consensus       218 ~~~~~~~~~~l~~~~~~~~-gg~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T  296 (418)
T 4eue_A          218 GEDWQEWCEELLYEDCFSD-KATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVT  296 (418)
T ss_dssp             SHHHHHHHHHHHHTTCEEE-EEEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCC
T ss_pred             HHHHHHHHHHHHHHhhhcC-CcEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcC
Confidence            9888 77888777554444 5899999999999988888  99999999999999999999999 999999999999999


Q ss_pred             cccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          202 PLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++......  .+.....+.  .++ ++..+|||+++.+.+|+++  +..+|+.+.+|||..+|
T Consensus       297 ~~s~~ip~--~p~y~~~~~--~~m-k~~G~~E~v~e~~~~L~sd--~~~~g~~~~~D~~~~~r  352 (418)
T 4eue_A          297 KASAYIPT--FPLYAAILY--KVM-KEKNIHENCIMQIERMFSE--KIYSNEKIQFDDKGRLR  352 (418)
T ss_dssp             HHHHTSTT--HHHHHHHHH--HHH-HHTTCCCCHHHHHHHHHHH--TTSSSSCCCCCTTSCEE
T ss_pred             hhhhcCCC--CcHHHHHHH--HHH-hhcCChHHHHHHHHHHhhc--cccCCCccccCCCceee
Confidence            98765532  111111111  123 5677999999999999975  67789999999977654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=100.00  E-value=2.8e-37  Score=256.53  Aligned_cols=222  Identities=20%  Similarity=0.210  Sum_probs=184.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFAD-HGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++|++|||||++|||++++++|++ +|++|+++.|+.++..+...+... ..++.++.+|++|.++++++++++.+.++
T Consensus         2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   81 (276)
T 1wma_A            2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYG   81 (276)
T ss_dssp             CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            3579999999999999999999999 999988888876654433333222 24688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCC-HHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLD-FSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----------  159 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~-~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----------  159 (264)
                      ++|+||||||+....  . .+.+ .++|++.+++|+.+++++++.++|.|++   .++||++||..+..+          
T Consensus        82 ~id~li~~Ag~~~~~--~-~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~---~g~iv~~sS~~~~~~~~~~~~~~~~  155 (276)
T 1wma_A           82 GLDVLVNNAGIAFKV--A-DPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQ  155 (276)
T ss_dssp             SEEEEEECCCCCCCT--T-CCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHH
T ss_pred             CCCEEEECCcccccC--C-CccccHHHHHhhhheeeeeHHHHHHHHHHhhCC---CCEEEEECChhhhcccccCChhHHh
Confidence            999999999987543  2 3344 5899999999999999999999998865   479999999876521          


Q ss_pred             -------------------------------CCCCchhhchHHHHHHHHHHHHHHhCc----CCceEEEeeCCcccCccc
Q 041914          160 -------------------------------GKRRTDYHMSKHAVIGLVRSASVQLGV----HGIRVNCVSPHGLATPLT  204 (264)
Q Consensus       160 -------------------------------~~~~~~y~~sK~al~~~~~~la~e~~~----~~i~v~~v~pG~v~t~~~  204 (264)
                                                     ..+...|++||++++.|++.++.++++    .||++++|+||++.|+|.
T Consensus       156 ~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~  235 (276)
T 1wma_A          156 KFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA  235 (276)
T ss_dssp             HHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTT
T ss_pred             hccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcC
Confidence                                           112378999999999999999999987    799999999999999975


Q ss_pred             ccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC--CCCeeccEEEecCee
Q 041914          205 CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD--SEFVTGHDLVVDGGF  261 (264)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~--~~~~~G~~i~~dgG~  261 (264)
                      ..                    .+..+|+|+|+.+++|++..  ..+++|+.|. +++.
T Consensus       236 ~~--------------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~-~~~~  273 (276)
T 1wma_A          236 GP--------------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKRV  273 (276)
T ss_dssp             CT--------------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTEE
T ss_pred             Cc--------------------cccCChhHhhhhHhhhhcCcccccccCceEec-cCce
Confidence            31                    23569999999999999744  4699999987 6553

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=100.00  E-value=4e-36  Score=251.53  Aligned_cols=218  Identities=21%  Similarity=0.264  Sum_probs=182.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++.+|++|||||++|||++++++|+++|++|+++.|+.++..+...+..  ...++.++.+|++|.++++++++++.+.
T Consensus        24 ~~~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~  103 (286)
T 1xu9_A           24 EMLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKL  103 (286)
T ss_dssp             GGGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             hhcCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHH
Confidence            35889999999999999999999999999998888887665543322221  2236889999999999999999999999


Q ss_pred             cCCccEEEEc-CCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 YGQLDIMFSN-AGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~-ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++++|+|||| +|....   ++.+.+.++|++.+++|+.+++.+++.++|.|+++  .++||++||..+..+.++...|+
T Consensus       104 ~g~iD~li~naag~~~~---~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~--~g~iv~isS~~~~~~~~~~~~Y~  178 (286)
T 1xu9_A          104 MGGLDMLILNHITNTSL---NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYS  178 (286)
T ss_dssp             HTSCSEEEECCCCCCCC---CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHH
T ss_pred             cCCCCEEEECCccCCCC---ccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHC--CCEEEEECCcccccCCCCccHHH
Confidence            9999999999 565432   45567899999999999999999999999999764  48999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHh--CcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          168 MSKHAVIGLVRSASVQL--GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      +||++++.|++.++.|+  ...||++++|+||+++|++......   .    .      ......+|||+|+.++..+..
T Consensus       179 asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~---~----~------~~~~~~~~~~vA~~i~~~~~~  245 (286)
T 1xu9_A          179 ASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVS---G----I------VHMQAAPKEECALEIIKGGAL  245 (286)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSC---G----G------GGGGCBCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhcc---c----c------ccCCCCCHHHHHHHHHHHHhc
Confidence            99999999999999999  6789999999999999998643211   0    0      002356899999999998754


Q ss_pred             C
Q 041914          246 D  246 (264)
Q Consensus       246 ~  246 (264)
                      .
T Consensus       246 ~  246 (286)
T 1xu9_A          246 R  246 (286)
T ss_dssp             T
T ss_pred             C
Confidence            3

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=2.4e-37  Score=294.66  Aligned_cols=244  Identities=20%  Similarity=0.203  Sum_probs=196.3

Q ss_pred             ccccccCCCcEEEEeCCCCh-hHHHHHHHHHHcCCcEEEEecC-chhhHHHHHhh---hC--CCcEEEEEecCCCHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASG-IGETTARLFADHGARMIVIADI-QDELGRQVATS---IG--VGKCHYVHCDVTNECQVK   79 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~v~~~~~~-~~~~~~~~~~~---~~--~~~~~~~~~D~s~~~~~~   79 (264)
                      ..+.++++||++|||||++| ||+++|++|+++|++|+++.++ .++..+...+.   ..  ..++.++++|++|.++++
T Consensus       468 a~~~msL~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVe  547 (1688)
T 2pff_A          468 XXXXVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVE  547 (1688)
T ss_dssp             SSSCCCCCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHH
T ss_pred             cccccccCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHH
Confidence            33455789999999999998 9999999999999998888544 33332222222   11  246889999999999999


Q ss_pred             HHHHHHHHh-----cC-CccEEEEcCCCCCCCCCCccCCC--HHHHHHHHhhHHHHHHHHHHHH--HHHHHcCCCCcEEE
Q 041914           80 ALVDSTVQN-----YG-QLDIMFSNAGILSSSDQTVLDLD--FSAFDRLFAINVRGMAACVKHA--ARVMVEGGVRGSIV  149 (264)
Q Consensus        80 ~~~~~~~~~-----~~-~id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--l~~~~~~~~~~~iv  149 (264)
                      ++++++.+.     +| ++|+||||||+.... .++.+.+  .++|++++++|+.+++.+++.+  +|.|++++ .++||
T Consensus       548 aLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g-~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krg-gGrIV  625 (1688)
T 2pff_A          548 ALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQG-IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVIL  625 (1688)
T ss_dssp             HHHHHHHSCTTSSSCCCCCCEEECCCCCCCCS-BCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSC-EEECC
T ss_pred             HHHHHHHHhccccccCCCCeEEEECCCcCCCC-CChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCC-CCEEE
Confidence            999999988     77 999999999986432 1577788  9999999999999999999998  88887765 68999


Q ss_pred             EecCCCCCCCCCCCchhhchHHHHHHH-HHHHHHHhCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCCCC
Q 041914          150 CTASVAGSCGGKRRTDYHMSKHAVIGL-VRSASVQLGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPLEG  227 (264)
Q Consensus       150 ~iss~~~~~~~~~~~~y~~sK~al~~~-~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (264)
                      ++||..+..+  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|....      +.........|.  
T Consensus       626 nISSiAG~~G--g~saYaASKAAL~aLttrsLAeEla~~-IRVNaVaPG~V~TT~M~~~~------e~~~~~l~~ipl--  694 (1688)
T 2pff_A          626 PMSPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN------NIIAEGIEKMGV--  694 (1688)
T ss_dssp             CCCSCTTTSS--CBTTHHHHHHHHTHHHHHTTTSSCTTT-EECCCCCCCCCCCCSSSCTT------TTCSTTTSSSSC--
T ss_pred             EEEChHhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEECcCcCCcccCCc------hHHHHHHHhCCC--
Confidence            9999998876  678999999999999 78888888887 999999999999 7875421      000111122232  


Q ss_pred             CCCChHHHHHHHHHHhCCC-CCCeeccEEEec--Ceeec
Q 041914          228 VVLRAGHVADAVLFLACRD-SEFVTGHDLVVD--GGFLI  263 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~  263 (264)
                      +..+|+|+|+.++||+++. ..+++|+.|.+|  ||+..
T Consensus       695 R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~VDVDGG~~~  733 (1688)
T 2pff_A          695 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  733 (1688)
T ss_dssp             CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCCCCSCSGGG
T ss_pred             CCCCHHHHHHHHHHHhCCCccccccCcEEEEEcCCCeee
Confidence            5569999999999999987 689999999875  99764

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=3.2e-36  Score=295.18  Aligned_cols=242  Identities=20%  Similarity=0.214  Sum_probs=193.8

Q ss_pred             ccccCCCcEEEEeCCCCh-hHHHHHHHHHHcCCcEEEEecCc-hhhHHH---HHhhhC--CCcEEEEEecCCCHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASG-IGETTARLFADHGARMIVIADIQ-DELGRQ---VATSIG--VGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~v~~~~~~~-~~~~~~---~~~~~~--~~~~~~~~~D~s~~~~~~~~   81 (264)
                      +.++++||++|||||++| ||+++|++|+++|++|++++++. ++..+.   +.+...  ..++.++++|++|.++++++
T Consensus       669 ~~m~l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~al  748 (1887)
T 2uv8_A          669 NGVTFKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEAL  748 (1887)
T ss_dssp             TCBCCTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             ccCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHH
Confidence            455789999999999998 99999999999999988885444 333222   222222  34789999999999999999


Q ss_pred             HHHHHHh-----cC-CccEEEEcCCCCCCCCCCccCCC--HHHHHHHHhhHHHHHHHHHHHH--HHHHHcCCCCcEEEEe
Q 041914           82 VDSTVQN-----YG-QLDIMFSNAGILSSSDQTVLDLD--FSAFDRLFAINVRGMAACVKHA--ARVMVEGGVRGSIVCT  151 (264)
Q Consensus        82 ~~~~~~~-----~~-~id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~~--l~~~~~~~~~~~iv~i  151 (264)
                      ++++.+.     +| ++|+||||||+.... .++.+.+  .++|++++++|+.+++.+++.+  +|.|.+++ .++||++
T Consensus       749 v~~i~~~~~~~G~G~~LDiLVNNAGi~~~~-~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~-~G~IVnI  826 (1887)
T 2uv8_A          749 IEFIYDTEKNGGLGWDLDAIIPFAAIPEQG-IELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRP-AQVILPM  826 (1887)
T ss_dssp             HHHHHSCTTTTSCCCCCSEEEECCCCCCCS-BCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCC-EEEEEEE
T ss_pred             HHHHHHhccccccCCCCeEEEECCCcCCCC-CChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCC-CCEEEEE
Confidence            9999988     66 999999999986432 1677888  8999999999999999999988  78887665 6899999


Q ss_pred             cCCCCCCCCCCCchhhchHHHHHHH-HHHHHHHhCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCCCCCC
Q 041914          152 ASVAGSCGGKRRTDYHMSKHAVIGL-VRSASVQLGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPLEGVV  229 (264)
Q Consensus       152 ss~~~~~~~~~~~~y~~sK~al~~~-~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (264)
                      ||..+..+  +...|++||+|+++| ++.++.++++. |+||+|+||+++ |+|.... . .......    ..|.  +.
T Consensus       827 SS~ag~~g--g~~aYaASKAAL~~Lttr~lA~ela~~-IrVNaV~PG~V~tT~m~~~~-~-~~~~~~~----~~pl--r~  895 (1887)
T 2uv8_A          827 SPNHGTFG--GDGMYSESKLSLETLFNRWHSESWANQ-LTVCGAIIGWTRGTGLMSAN-N-IIAEGIE----KMGV--RT  895 (1887)
T ss_dssp             CSCTTCSS--CBTTHHHHHHHGGGHHHHHHHSSCTTT-EEEEEEEECCEECC-----C-C-TTHHHHH----TTSC--CC
T ss_pred             cChHhccC--CCchHHHHHHHHHHHHHHHHHHHhCCC-eEEEEEEecccccccccccc-h-hHHHHHH----hcCC--CC
Confidence            99998877  678999999999999 99999999887 999999999999 7876431 1 1111111    1232  56


Q ss_pred             CChHHHHHHHHHHhCCC-CCCeeccEEEec--Ceeec
Q 041914          230 LRAGHVADAVLFLACRD-SEFVTGHDLVVD--GGFLI  263 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~-~~~~~G~~i~~d--gG~~~  263 (264)
                      .+|+|+|+.++||+++. ..+++|+.|.+|  ||+.+
T Consensus       896 ~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~  932 (1887)
T 2uv8_A          896 FSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQF  932 (1887)
T ss_dssp             EEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTT
T ss_pred             CCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeec
Confidence            69999999999999987 689999999875  99754

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=1.4e-35  Score=290.17  Aligned_cols=242  Identities=19%  Similarity=0.199  Sum_probs=194.6

Q ss_pred             ccccCCCcEEEEeCCCCh-hHHHHHHHHHHcCCcEEEEecCchh-hHH---HHHhhhC--CCcEEEEEecCCCHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASG-IGETTARLFADHGARMIVIADIQDE-LGR---QVATSIG--VGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~v~~~~~~~~~-~~~---~~~~~~~--~~~~~~~~~D~s~~~~~~~~   81 (264)
                      +.+++.||++|||||++| ||+++|++|+++|++|++++++..+ ..+   .+.+.+.  ..++.++.||++|.++++++
T Consensus       646 ~~m~L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~al  725 (1878)
T 2uv9_A          646 SGLTFQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEAL  725 (1878)
T ss_dssp             HCBCCTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHH
T ss_pred             cCCCCCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHH
Confidence            345789999999999999 9999999999999998888655433 322   2222332  24789999999999999999


Q ss_pred             HHHHHHh---cC-CccEEEEcCCCCCCCCCCccCCC--HHHHHHHHhhHHHHHHHHHHH--HHHHHHcCCCCcEEEEecC
Q 041914           82 VDSTVQN---YG-QLDIMFSNAGILSSSDQTVLDLD--FSAFDRLFAINVRGMAACVKH--AARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        82 ~~~~~~~---~~-~id~lv~~ag~~~~~~~~~~~~~--~~~~~~~~~~n~~~~~~l~~~--~l~~~~~~~~~~~iv~iss  153 (264)
                      ++++.+.   +| ++|+||||||+.... .++.+.+  .++|++++++|+.+++.+++.  ++|.|.+++ .++||++||
T Consensus       726 v~~i~~~~~~~G~~IDiLVnNAGi~~~~-~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~-~G~IVnISS  803 (1878)
T 2uv9_A          726 VNYIYDTKNGLGWDLDYVVPFAAIPENG-REIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRP-AQVILPLSP  803 (1878)
T ss_dssp             HHHHHCSSSSCCCCCSEEEECCCCCCTT-CCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCC-EEECCEECS
T ss_pred             HHHHHHhhcccCCCCcEEEeCcccccCC-CChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCC-CCEEEEEcc
Confidence            9999988   88 999999999986542 1678888  899999999999999999987  778887665 689999999


Q ss_pred             CCCCCCCCCCchhhchHHHHHHHHHHHHH-HhCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCCCCCCCC
Q 041914          154 VAGSCGGKRRTDYHMSKHAVIGLVRSASV-QLGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPLEGVVLR  231 (264)
Q Consensus       154 ~~~~~~~~~~~~y~~sK~al~~~~~~la~-e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (264)
                      ..+..+  +...|++||+++++|++.++. ++++. |+||+|+||+++ |+|....     +...... ...|.  +..+
T Consensus       804 ~ag~~g--g~~aYaASKAAL~aLt~~laAeEla~~-IrVNaVaPG~V~gT~m~~~~-----~~~~~~~-~~~pl--r~~s  872 (1878)
T 2uv9_A          804 NHGTFG--NDGLYSESKLALETLFNRWYSESWGNY-LTICGAVIGWTRGTGLMSAN-----NLVAEGV-EKLGV--RTFS  872 (1878)
T ss_dssp             CSSSSS--CCSSHHHHHHHHTTHHHHHHHSTTTTT-EEEEEEEECCBCCTTSCSHH-----HHTHHHH-HTTTC--CCBC
T ss_pred             hhhccC--CchHHHHHHHHHHHHHHHHHHHHcCCC-eEEEEEEecceecCcccccc-----hhhHHHH-HhcCC--CCCC
Confidence            999877  467899999999999987655 57776 999999999999 9986421     1111111 12332  5569


Q ss_pred             hHHHHHHHHHHhCCCC-CCeeccEEEe--cCeeec
Q 041914          232 AGHVADAVLFLACRDS-EFVTGHDLVV--DGGFLI  263 (264)
Q Consensus       232 ~edva~~~~~l~s~~~-~~~~G~~i~~--dgG~~~  263 (264)
                      |+|+|+.++||+++.. .++||+.|.+  |||+.+
T Consensus       873 PeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~  907 (1878)
T 2uv9_A          873 QQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQF  907 (1878)
T ss_dssp             HHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGG
T ss_pred             HHHHHHHHHHHhCCcccccccCcEEEEEcCCCccc
Confidence            9999999999999876 8999999886  599764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=100.00  E-value=1.8e-35  Score=235.06  Aligned_cols=198  Identities=21%  Similarity=0.212  Sum_probs=173.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+++||++++++|+ +|++|+++.|+..                ++++|++|+++++++++++    +++|+||
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~~----~~~d~vi   63 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQV----GKVDAIV   63 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHHH----CCEEEEE
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHHh----CCCCEEE
Confidence            79999999999999999999 9999888888754                4789999999999998765    7899999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      ||||.....  ++.+.+.++|++.+++|+.+++++++.+.|.|++   .++||++||..+..+.++...|+++|++++.+
T Consensus        64 ~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~---~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~  138 (202)
T 3d7l_A           64 SATGSATFS--PLTELTPEKNAVTISSKLGGQINLVLLGIDSLND---KGSFTLTTGIMMEDPIVQGASAAMANGAVTAF  138 (202)
T ss_dssp             ECCCCCCCC--CGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEE---EEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             ECCCCCCCC--ChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhcc---CCEEEEEcchhhcCCCCccHHHHHHHHHHHHH
Confidence            999987544  7888999999999999999999999999998865   37999999999999999999999999999999


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEE
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLV  256 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~  256 (264)
                      ++.++.|+ ++||++++++||++.|++...         ..    ..+. .++++|+|+|+++++++   .++++|+.|+
T Consensus       139 ~~~~~~e~-~~gi~v~~v~pg~v~~~~~~~---------~~----~~~~-~~~~~~~dva~~~~~~~---~~~~~G~~~~  200 (202)
T 3d7l_A          139 AKSAAIEM-PRGIRINTVSPNVLEESWDKL---------EP----FFEG-FLPVPAAKVARAFEKSV---FGAQTGESYQ  200 (202)
T ss_dssp             HHHHTTSC-STTCEEEEEEECCBGGGHHHH---------GG----GSTT-CCCBCHHHHHHHHHHHH---HSCCCSCEEE
T ss_pred             HHHHHHHc-cCCeEEEEEecCccCCchhhh---------hh----hccc-cCCCCHHHHHHHHHHhh---hccccCceEe
Confidence            99999999 789999999999999987421         01    1122 56789999999999888   3578999999


Q ss_pred             ec
Q 041914          257 VD  258 (264)
Q Consensus       257 ~d  258 (264)
                      +|
T Consensus       201 vd  202 (202)
T 3d7l_A          201 VY  202 (202)
T ss_dssp             EC
T ss_pred             cC
Confidence            87

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=100.00  E-value=5.4e-36  Score=246.11  Aligned_cols=220  Identities=30%  Similarity=0.384  Sum_probs=181.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||+|+||++++++|+++|++|+++.|+.++...            .+.+|++|.++++++++++   .+++|+|
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------------~~~~D~~~~~~~~~~~~~~---~~~~d~v   66 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA------------DLSTPGGRETAVAAVLDRC---GGVLDGL   66 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC------------CTTSHHHHHHHHHHHHHHH---TTCCSEE
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc------------cccCCcccHHHHHHHHHHc---CCCccEE
Confidence            689999999999999999999999999998887654311            1678999999998888754   3689999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG---------------  160 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~---------------  160 (264)
                      |||||.....         +.|++.+++|+.+++++++.++|.|++++ .++||++||..+..+.               
T Consensus        67 i~~Ag~~~~~---------~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~  136 (255)
T 2dkn_A           67 VCCAGVGVTA---------ANSGLVVAVNYFGVSALLDGLAEALSRGQ-QPAAVIVGSIAATQPGAAELPMVEAMLAGDE  136 (255)
T ss_dssp             EECCCCCTTS---------SCHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSTTGGGCHHHHHHHHTCH
T ss_pred             EECCCCCCcc---------hhHHHHHHHHhHHHHHHHHHHHHHhhhcC-CceEEEEeccccccccccccchhhhhcccch
Confidence            9999976421         13889999999999999999999998876 6899999999887654               


Q ss_pred             -----------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-CCChHHHHhhcCCCCCCCCC
Q 041914          161 -----------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-GMPADEVEKLFEPQTPLEGV  228 (264)
Q Consensus       161 -----------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~  228 (264)
                                 ++...|+.+|++++.+++.++.++++.||++++++||.+.|++..... ..........+. . |. ++
T Consensus       137 ~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~  213 (255)
T 2dkn_A          137 ARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFV-A-PL-GR  213 (255)
T ss_dssp             HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCC-C-TT-SS
T ss_pred             hhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHH-H-Hh-cC
Confidence                       567789999999999999999999989999999999999999865431 111122222221 1 44 67


Q ss_pred             CCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       229 ~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +.+++|+|+++++++++...+++|+.|.+|||..+
T Consensus       214 ~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~~  248 (255)
T 2dkn_A          214 GSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMDA  248 (255)
T ss_dssp             CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHHH
T ss_pred             CCCHHHHHHHHHHHhCCCcccceeeEEEecCCeEe
Confidence            89999999999999988777899999999999764

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=100.00  E-value=8.7e-34  Score=226.08  Aligned_cols=201  Identities=21%  Similarity=0.253  Sum_probs=165.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||++|||++++++|+++  +|+++.|+.++.. .+.+....   .++++|++|++++++++++    ++++|+|
T Consensus         1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~-~~~~~~~~---~~~~~D~~~~~~~~~~~~~----~~~id~v   70 (207)
T 2yut_A            1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALA-ELAREVGA---RALPADLADELEAKALLEE----AGPLDLL   70 (207)
T ss_dssp             CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHH-HHHHHHTC---EECCCCTTSHHHHHHHHHH----HCSEEEE
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHH-HHHHhccC---cEEEeeCCCHHHHHHHHHh----cCCCCEE
Confidence            68999999999999999999999  8888888655443 33333322   7889999999999999887    6899999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      |||||.....  ++.+.+.++|++.+++|+.+++++++.+    .+++ .++||++||..+..+.++...|+++|++++.
T Consensus        71 i~~ag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~  143 (207)
T 2yut_A           71 VHAVGKAGRA--SVREAGRDLVEEMLAAHLLTAAFVLKHA----RFQK-GARAVFFGAYPRYVQVPGFAAYAAAKGALEA  143 (207)
T ss_dssp             EECCCCCCCB--CSCC---CHHHHHHHHHHHHHHHHHHHC----CEEE-EEEEEEECCCHHHHSSTTBHHHHHHHHHHHH
T ss_pred             EECCCcCCCC--ChhhCCHHHHHHHHHHHhHHHHHHHHHH----HhcC-CcEEEEEcChhhccCCCCcchHHHHHHHHHH
Confidence            9999987544  7778899999999999999999999988    3333 5799999999998888999999999999999


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      |++.++.+++++||++++++||++.|++....              ..+. +++++|+|+|+++++++.+...
T Consensus       144 ~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~~~--------------~~~~-~~~~~~~dva~~~~~~~~~~~~  201 (207)
T 2yut_A          144 YLEAARKELLREGVHLVLVRLPAVATGLWAPL--------------GGPP-KGALSPEEAARKVLEGLFREPV  201 (207)
T ss_dssp             HHHHHHHHHHTTTCEEEEECCCCBCSGGGGGG--------------TSCC-TTCBCHHHHHHHHHHHHC--CC
T ss_pred             HHHHHHHHHhhhCCEEEEEecCcccCCCcccc--------------CCCC-CCCCCHHHHHHHHHHHHhCCCC
Confidence            99999999999999999999999999974211              1223 6788999999999999976543

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=100.00  E-value=1.9e-32  Score=246.12  Aligned_cols=220  Identities=15%  Similarity=0.127  Sum_probs=175.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEE-E-ecCch------------hhHHHHHhhhC--CCcEEEEEecCCCHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIV-I-ADIQD------------ELGRQVATSIG--VGKCHYVHCDVTNECQ   77 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~-~-~~~~~------------~~~~~~~~~~~--~~~~~~~~~D~s~~~~   77 (264)
                      .++++|||||++|||.+++++|+++|+++++ + .|+..            +..+.+.+.+.  ..++.++.||++|.++
T Consensus       250 ~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~  329 (525)
T 3qp9_A          250 ADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEA  329 (525)
T ss_dssp             TTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHH
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHH
Confidence            5899999999999999999999999999544 4 56531            22222222221  3478999999999999


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS  157 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~  157 (264)
                      ++++++++. +++++|+||||||+....  ++.+.+.++|++++++|+.+++++.+.+.+.+++++..++||++||..+.
T Consensus       330 v~~~~~~i~-~~g~id~vVh~AGv~~~~--~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~  406 (525)
T 3qp9_A          330 AARLLAGVS-DAHPLSAVLHLPPTVDSE--PLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI  406 (525)
T ss_dssp             HHHHHHTSC-TTSCEEEEEECCCCCCCC--CTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT
T ss_pred             HHHHHHHHH-hcCCCcEEEECCcCCCCC--chhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc
Confidence            999999998 789999999999998765  88999999999999999999999999999999775434799999999999


Q ss_pred             CCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHH
Q 041914          158 CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD  237 (264)
Q Consensus       158 ~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~  237 (264)
                      .+.++...|+++|+++++|+    .++++.||++++|+||+++|+|....   .........      ....++|+|+++
T Consensus       407 ~g~~g~~~YaaaKa~l~~lA----~~~~~~gi~v~sI~pG~~~tgm~~~~---~~~~~~~~~------g~~~l~pee~a~  473 (525)
T 3qp9_A          407 WGGAGQGAYAAGTAFLDALA----GQHRADGPTVTSVAWSPWEGSRVTEG---ATGERLRRL------GLRPLAPATALT  473 (525)
T ss_dssp             TCCTTCHHHHHHHHHHHHHH----TSCCSSCCEEEEEEECCBTTSGGGSS---HHHHHHHHT------TBCCBCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHHHH----HHHHhCCCCEEEEECCccccccccch---hhHHHHHhc------CCCCCCHHHHHH
Confidence            99999999999999999884    56778899999999999999987421   111111111      024569999999


Q ss_pred             HHHHHhCCCCCC
Q 041914          238 AVLFLACRDSEF  249 (264)
Q Consensus       238 ~~~~l~s~~~~~  249 (264)
                      .+.++++.....
T Consensus       474 ~l~~~l~~~~~~  485 (525)
T 3qp9_A          474 ALDTALGHGDTA  485 (525)
T ss_dssp             HHHHHHHHTCSE
T ss_pred             HHHHHHhCCCCe
Confidence            999999765443

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.97  E-value=4.3e-31  Score=269.79  Aligned_cols=240  Identities=15%  Similarity=0.150  Sum_probs=177.2

Q ss_pred             ccCCCcEEEEeCCCCh-hHHHHHHHHHHcCCcEEEEecCchhh----HHHHHhhhC--CCcEEEEEecCCCHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASG-IGETTARLFADHGARMIVIADIQDEL----GRQVATSIG--VGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        11 ~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      ..|+||++|||||++| ||+++|+.|+++|++|+++.|+.+..    .+.+.+.+.  ..++..+++|++|.++++++++
T Consensus      2132 ~~l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~ 2211 (3089)
T 3zen_D         2132 XXXXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVE 2211 (3089)
T ss_dssp             CCCCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             ccCCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHH
Confidence            3489999999999999 99999999999999999888876652    233333333  2468899999999999999999


Q ss_pred             HHHH----hcCCccEEEEcCCC----CCCCCCCccCCCHH----HHHHHHhhHHHHHHHHHHHHHHHHHcCCCC---cEE
Q 041914           84 STVQ----NYGQLDIMFSNAGI----LSSSDQTVLDLDFS----AFDRLFAINVRGMAACVKHAARVMVEGGVR---GSI  148 (264)
Q Consensus        84 ~~~~----~~~~id~lv~~ag~----~~~~~~~~~~~~~~----~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~---~~i  148 (264)
                      ++.+    .+|++|+||||||+    .... ....+.+.+    .++..+++|+.+++.+++.+.+.|.+++..   +.+
T Consensus      2212 ~i~~~~~~~fG~IDILVNNAGi~d~~~~~a-~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii 2290 (3089)
T 3zen_D         2212 WVGTEQTESLGPQSIHLKDAQTPTLLFPFA-APRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVV 2290 (3089)
T ss_dssp             HHTSCCEEEESSSEEEECCCCCCSEEEECC-CCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEE
T ss_pred             HHHhhhhhhcCCCCEEEECCCcccccCccc-ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEE
Confidence            9998    88999999999998    2111 122222333    345559999999999999999999876411   233


Q ss_pred             EEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHH--hCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCC
Q 041914          149 VCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ--LGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPL  225 (264)
Q Consensus       149 v~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e--~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~  225 (264)
                      ++.++..+.  .++...|++||+|+++|+|+++.|  +++ +|+||+++||++. |++.... . ........    .+ 
T Consensus      2291 ~~~ss~~g~--~g~~~aYsASKaAl~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~~~~-~-~~~~~~~~----~~- 2360 (3089)
T 3zen_D         2291 LPGSPNRGM--FGGDGAYGEAKSALDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLMGQN-D-AIVSAVEE----AG- 2360 (3089)
T ss_dssp             EEECSSTTS--CSSCSSHHHHGGGHHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTTTTT-T-TTHHHHGG----GS-
T ss_pred             EECCccccc--CCCchHHHHHHHHHHHHHHHHHhccccCC-CeEEEEEeecccCCCcccccc-h-hHHHHHHh----cC-
Confidence            444443332  235568999999999999999999  665 6999999999999 6654321 1 11111111    12 


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCe-eccEEEec--Ceee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFV-TGHDLVVD--GGFL  262 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~-~G~~i~~d--gG~~  262 (264)
                       .+..+|+|||++++||+|++.+++ +|+.+.+|  ||+.
T Consensus      2361 -~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~ 2399 (3089)
T 3zen_D         2361 -VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLG 2399 (3089)
T ss_dssp             -CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCS
T ss_pred             -CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcC
Confidence             344599999999999999886655 55655555  9974

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.97  E-value=7.3e-30  Score=227.06  Aligned_cols=215  Identities=18%  Similarity=0.241  Sum_probs=166.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchh--hHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDE--LGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|||||++|||++++++|+++|+ .|+++.|+..+  ..+++.+++  ...++.++.||++|.+++.++++++.+. 
T Consensus       239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~-  317 (496)
T 3mje_A          239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPED-  317 (496)
T ss_dssp             CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTT-
T ss_pred             CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHh-
Confidence            59999999999999999999999999 56666665322  223333332  2347999999999999999999998776 


Q ss_pred             CCccEEEEcCCCC-CCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           90 GQLDIMFSNAGIL-SSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~-~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      +++|+||||||+. ...  ++.+.+.++|++++++|+.+++++.+.+.+.    . .++||++||..+..+.++...|++
T Consensus       318 g~ld~vVh~AGv~~~~~--~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~----~-~~~iV~~SS~a~~~g~~g~~~YaA  390 (496)
T 3mje_A          318 APLTAVFHSAGVAHDDA--PVADLTLGQLDALMRAKLTAARHLHELTADL----D-LDAFVLFSSGAAVWGSGGQPGYAA  390 (496)
T ss_dssp             SCEEEEEECCCCCCSCC--CTTTCCHHHHHHHHHTTHHHHHHHHHHHTTS----C-CSEEEEEEEHHHHTTCTTCHHHHH
T ss_pred             CCCeEEEECCcccCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHhhcc----C-CCEEEEEeChHhcCCCCCcHHHHH
Confidence            7899999999997 443  8899999999999999999999999877543    3 579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+++++|++.+    +..||++++|+||++.++......     ...+.+....   -..++|+++++.+.+++..+..
T Consensus       391 aKa~ldala~~~----~~~Gi~v~sV~pG~w~~~gm~~~~-----~~~~~l~~~g---~~~l~pe~~~~~l~~~l~~~~~  458 (496)
T 3mje_A          391 ANAYLDALAEHR----RSLGLTASSVAWGTWGEVGMATDP-----EVHDRLVRQG---VLAMEPEHALGALDQMLENDDT  458 (496)
T ss_dssp             HHHHHHHHHHHH----HHTTCCCEEEEECEESSSCC-----------CHHHHHTT---EEEECHHHHHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHHH----HhcCCeEEEEECCcccCCccccCh-----HHHHHHHhcC---CCCCCHHHHHHHHHHHHcCCCc
Confidence            999999988754    456999999999999776432211     1111111110   1235899999999999875544


Q ss_pred             C
Q 041914          249 F  249 (264)
Q Consensus       249 ~  249 (264)
                      .
T Consensus       459 ~  459 (496)
T 3mje_A          459 A  459 (496)
T ss_dssp             E
T ss_pred             e
Confidence            3

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.96  E-value=1.2e-29  Score=237.88  Aligned_cols=218  Identities=15%  Similarity=0.216  Sum_probs=170.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHH-HcCCc-EEEEecCch---hhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFA-DHGAR-MIVIADIQD---ELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~-~~g~~-v~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+|++|||||++|||+++|++|+ ++|++ |++++|+..   ...+.+.+... ..++.+++||++|.++++++++++.+
T Consensus       529 ~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~  608 (795)
T 3slk_A          529 AAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPD  608 (795)
T ss_dssp             TTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCT
T ss_pred             cccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHH
Confidence            58999999999999999999999 79996 677777732   22233333222 35799999999999999999999987


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      .+ +||+||||||+..+.  ++.+.+.++|++++++|+.|++++.+.+.|.|       +||++||..+..+.+++..|+
T Consensus       609 ~~-~id~lVnnAGv~~~~--~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l-------~iV~~SS~ag~~g~~g~~~Ya  678 (795)
T 3slk_A          609 EH-PLTAVVHAAGVLDDG--VSESLTVERLDQVLRPKVDGARNLLELIDPDV-------ALVLFSSVSGVLGSGGQGNYA  678 (795)
T ss_dssp             TS-CEEEEEECCCCCCCC--CGGGCCHHHHHHHHCCCCCHHHHHHHHSCTTS-------EEEEEEETHHHHTCSSCHHHH
T ss_pred             hC-CCEEEEECCCcCCCC--chhhCCHHHHHHHHHHHHHHHHHHHHHHhhCC-------EEEEEccHHhcCCCCCCHHHH
Confidence            76 899999999998765  89999999999999999999999999986654       899999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+    |+++++.++++.||++|+|+||++.|++.....   .+.....+.. ..  ...++++|+.+.+...+..+.
T Consensus       679 Aaka----~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~---~~~~~~~~~~-~g--~~~l~~~e~~~~~~~~l~~~~  748 (795)
T 3slk_A          679 AANS----FLDALAQQRQSRGLPTRSLAWGPWAEHGMASTL---REAEQDRLAR-SG--LLPISTEEGLSQFDAACGGAH  748 (795)
T ss_dssp             HHHH----HHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHH---HHHHHHHHHH-TT--BCCCCHHHHHHHHHHHHTSSC
T ss_pred             HHHH----HHHHHHHHHHHcCCeEEEEECCeECcchhhccc---cHHHHHHHHh-cC--CCCCCHHHHHHHHHHHHhCCC
Confidence            9996    556666677778999999999999988643221   1111111211 11  234578888888877776554


Q ss_pred             CCee
Q 041914          248 EFVT  251 (264)
Q Consensus       248 ~~~~  251 (264)
                      ..+.
T Consensus       749 ~~~~  752 (795)
T 3slk_A          749 TVVA  752 (795)
T ss_dssp             SSCC
T ss_pred             cEEE
Confidence            4443

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.96  E-value=2e-28  Score=199.02  Aligned_cols=209  Identities=12%  Similarity=0.158  Sum_probs=157.3

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcE-EEEEecCCCHHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKC-HYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~-~~~~~D~s~~~~~~~~~~~   84 (264)
                      ..+...++++|++|||||+|+||++++++|+++|++|+++.|+.++..+ +..    ..+ .++.+|++         +.
T Consensus        12 ~~~~~~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~-~~~----~~~~~~~~~Dl~---------~~   77 (236)
T 3e8x_A           12 SGRENLYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPE-LRE----RGASDIVVANLE---------ED   77 (236)
T ss_dssp             ---------CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHH-HHH----TTCSEEEECCTT---------SC
T ss_pred             ccccccCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHH-HHh----CCCceEEEcccH---------HH
Confidence            3445677999999999999999999999999999999999998766533 222    157 88999999         34


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---C
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG---K  161 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~---~  161 (264)
                      +.+.++++|+||||||....          +++++.+++|+.+++++++++..    .+ .++||++||..+..+.   +
T Consensus        78 ~~~~~~~~D~vi~~ag~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~  142 (236)
T 3e8x_A           78 FSHAFASIDAVVFAAGSGPH----------TGADKTILIDLWGAIKTIQEAEK----RG-IKRFIMVSSVGTVDPDQGPM  142 (236)
T ss_dssp             CGGGGTTCSEEEECCCCCTT----------SCHHHHHHTTTHHHHHHHHHHHH----HT-CCEEEEECCTTCSCGGGSCG
T ss_pred             HHHHHcCCCEEEECCCCCCC----------CCccccchhhHHHHHHHHHHHHH----cC-CCEEEEEecCCCCCCCCChh
Confidence            44555689999999997542          25889999999999999998843    34 5799999998877654   5


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|+.+|++++.+.+       ..||+++.++||.+.++.......        .. ...+....+++++|+|+++++
T Consensus       143 ~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg~v~~~~~~~~~~--------~~-~~~~~~~~~i~~~Dva~~~~~  206 (236)
T 3e8x_A          143 NMRHYLVAKRLADDELK-------RSSLDYTIVRPGPLSNEESTGKVT--------VS-PHFSEITRSITRHDVAKVIAE  206 (236)
T ss_dssp             GGHHHHHHHHHHHHHHH-------HSSSEEEEEEECSEECSCCCSEEE--------EE-SSCSCCCCCEEHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHH-------HCCCCEEEEeCCcccCCCCCCeEE--------ec-cCCCcccCcEeHHHHHHHHHH
Confidence            67899999999999876       468999999999999986432211        00 111112567899999999999


Q ss_pred             HhCCCCCCeeccEEEecCee
Q 041914          242 LACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ++.+..  .+|+.+++++|.
T Consensus       207 ~~~~~~--~~g~~~~v~~~~  224 (236)
T 3e8x_A          207 LVDQQH--TIGKTFEVLNGD  224 (236)
T ss_dssp             HTTCGG--GTTEEEEEEECS
T ss_pred             HhcCcc--ccCCeEEEeCCC
Confidence            996543  789999998773

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.95  E-value=4.7e-27  Score=194.51  Aligned_cols=183  Identities=16%  Similarity=0.129  Sum_probs=149.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|++|||||+|+||++++++|+++|++|+++.|+..+..        ..++.++.+|++|.+++.++++       ++|
T Consensus         2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~--------~~~~~~~~~Dl~d~~~~~~~~~-------~~D   66 (267)
T 3rft_A            2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA--------GPNEECVQCDLADANAVNAMVA-------GCD   66 (267)
T ss_dssp             CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC--------CTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc--------CCCCEEEEcCCCCHHHHHHHHc-------CCC
Confidence            4689999999999999999999999999888888765432        2468899999999999998887       789


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC------------CCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS------------CGGK  161 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~------------~~~~  161 (264)
                      +||||||....          +.|++.+++|+.+++++++++.    +.+ .++||++||..+.            .+.+
T Consensus        67 ~vi~~Ag~~~~----------~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iv~~SS~~~~g~~~~~~~~~e~~~~~  131 (267)
T 3rft_A           67 GIVHLGGISVE----------KPFEQILQGNIIGLYNLYEAAR----AHG-QPRIVFASSNHTIGYYPQTERLGPDVPAR  131 (267)
T ss_dssp             EEEECCSCCSC----------CCHHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEEEEGGGGTTSBTTSCBCTTSCCC
T ss_pred             EEEECCCCcCc----------CCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEcchHHhCCCCCCCCCCCCCCCC
Confidence            99999998432          2478999999999999999984    334 5799999998776            4456


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|+.||++.+.+++.++.++   |+++++|.||.+.++....      +..           ..+++++|+++.+..
T Consensus       132 ~~~~Y~~sK~~~e~~~~~~a~~~---g~~~~~vr~~~v~~~~~~~------~~~-----------~~~~~~~d~a~~~~~  191 (267)
T 3rft_A          132 PDGLYGVSKCFGENLARMYFDKF---GQETALVRIGSCTPEPNNY------RML-----------STWFSHDDFVSLIEA  191 (267)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECBCSSSCCST------THH-----------HHBCCHHHHHHHHHH
T ss_pred             CCChHHHHHHHHHHHHHHHHHHh---CCeEEEEEeecccCCCCCC------Cce-----------eeEEcHHHHHHHHHH
Confidence            77899999999999999999886   7899999999888764321      010           234688999999998


Q ss_pred             HhCCC
Q 041914          242 LACRD  246 (264)
Q Consensus       242 l~s~~  246 (264)
                      ++.+.
T Consensus       192 ~~~~~  196 (267)
T 3rft_A          192 VFRAP  196 (267)
T ss_dssp             HHHCS
T ss_pred             HHhCC
Confidence            88543

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.95  E-value=7.6e-27  Score=208.11  Aligned_cols=212  Identities=19%  Similarity=0.221  Sum_probs=165.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchh--hHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDE--LGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++|||||++|||++++++|+++|++ |+++.|+..+  ..+.+.+.+  ...++.++.||++|.+++.++++++ +.
T Consensus       225 ~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i-~~  303 (486)
T 2fr1_A          225 PTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI-GD  303 (486)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS-CT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHH-Hh
Confidence            5799999999999999999999999996 7778887542  222222222  2347899999999999999999998 56


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++++++|+.+++++.+.+.+    .+ .++||++||..+..+.++...|++
T Consensus       304 ~g~ld~VIh~AG~~~~~--~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~----~~-~~~~V~~SS~a~~~g~~g~~~Yaa  376 (486)
T 2fr1_A          304 DVPLSAVFHAAATLDDG--TVDTLTGERIERASRAKVLGARNLHELTRE----LD-LTAFVLFSSFASAFGAPGLGGYAP  376 (486)
T ss_dssp             TSCEEEEEECCCCCCCC--CGGGCCHHHHHHHTHHHHHHHHHHHHHHTT----SC-CSEEEEEEEHHHHTCCTTCTTTHH
T ss_pred             cCCCcEEEECCccCCCC--ccccCCHHHHHHHHHHHHHHHHHHHHHhCc----CC-CCEEEEEcChHhcCCCCCCHHHHH
Confidence            68999999999988654  788899999999999999999999987643    33 579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc-ccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP-LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +|++++.|++.++    ..|+++++|+||++.++ |....       ....+..   .....++++|+++.+..++....
T Consensus       377 aka~l~~la~~~~----~~gi~v~~i~pG~~~~~gm~~~~-------~~~~~~~---~g~~~i~~e~~a~~l~~~l~~~~  442 (486)
T 2fr1_A          377 GNAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAEGP-------VADRFRR---HGVIEMPPETACRALQNALDRAE  442 (486)
T ss_dssp             HHHHHHHHHHHHH----HTTCCCEEEEECCBC-------------------CTT---TTEECBCHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHH----hcCCeEEEEECCeeCCCcccchh-------HHHHHHh---cCCCCCCHHHHHHHHHHHHhCCC
Confidence            9999999876543    45999999999999876 43211       1111111   11246799999999999986543

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.95  E-value=5.5e-26  Score=203.41  Aligned_cols=208  Identities=22%  Similarity=0.281  Sum_probs=164.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchh--hHHHHHhhh-C-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDE--LGRQVATSI-G-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~--~~~~~~~~~-~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++|||||++|||++++++|+++|++ |+++.|+..+  ..+.+.+.+ . ..++.++.||++|.+++.+++++    
T Consensus       258 ~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~----  333 (511)
T 2z5l_A          258 PSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA----  333 (511)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH----
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc----
Confidence            5799999999999999999999999995 7777777532  222332322 2 24789999999999999999886    


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                       +++|+||||||+....  .+.+.+.++|++++++|+.+++++.+.+.+.   .+ .++||++||..+..+.++...|++
T Consensus       334 -~~ld~VVh~AGv~~~~--~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~---~~-~~~~V~~SS~a~~~g~~g~~~Yaa  406 (511)
T 2z5l_A          334 -YPPNAVFHTAGILDDA--VIDTLSPESFETVRGAKVCGAELLHQLTADI---KG-LDAFVLFSSVTGTWGNAGQGAYAA  406 (511)
T ss_dssp             -SCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC---TT-CCCEEEEEEGGGTTCCTTBHHHHH
T ss_pred             -CCCcEEEECCcccCCc--ccccCCHHHHHHHHHHHHHHHHHHHHHHhhc---cC-CCEEEEEeCHHhcCCCCCCHHHHH
Confidence             6899999999998654  7888999999999999999999998876321   13 579999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcc-cCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGL-ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +|++++.|++.+    +..|+++++|+||++ .|.|....   ..... ...      ....++++|+++.+..++...
T Consensus       407 aKa~ld~la~~~----~~~gi~v~sv~pG~~~~tgm~~~~---~~~~~-~~~------g~~~l~~e~~a~~l~~al~~~  471 (511)
T 2z5l_A          407 ANAALDALAERR----RAAGLPATSVAWGLWGGGGMAAGA---GEESL-SRR------GLRAMDPDAAVDALLGAMGRN  471 (511)
T ss_dssp             HHHHHHHHHHHH----HTTTCCCEEEEECCBCSTTCCCCH---HHHHH-HHH------TBCCBCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHH----HHcCCcEEEEECCcccCCcccccc---cHHHH-Hhc------CCCCCCHHHHHHHHHHHHhCC
Confidence            999999999865    356999999999999 77776421   01111 110      023569999999999988644

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.94  E-value=4.9e-26  Score=195.04  Aligned_cols=224  Identities=16%  Similarity=0.125  Sum_probs=167.8

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHc-CC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADH-GA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~-g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ......+++|++|||||+|+||++++++|+++ |+ +|+++.|+..+. ..+.+.....++.++.+|++|.+++.++++ 
T Consensus        13 ~~~~~~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~-~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~-   90 (344)
T 2gn4_A           13 PNHQNMLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQ-SEMAMEFNDPRMRFFIGDVRDLERLNYALE-   90 (344)
T ss_dssp             ---CCTTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHH-HHHHHHHCCTTEEEEECCTTCHHHHHHHTT-
T ss_pred             ccHHHhhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhH-HHHHHHhcCCCEEEEECCCCCHHHHHHHHh-
Confidence            33344578999999999999999999999999 98 888888765543 333333334578999999999988887765 


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                            ++|+|||+||....   +   ....+..+.+++|+.++.++++++.+.    + .+++|++||..+..|   ..
T Consensus        91 ------~~D~Vih~Aa~~~~---~---~~~~~~~~~~~~Nv~gt~~l~~aa~~~----~-v~~~V~~SS~~~~~p---~~  150 (344)
T 2gn4_A           91 ------GVDICIHAAALKHV---P---IAEYNPLECIKTNIMGASNVINACLKN----A-ISQVIALSTDKAANP---IN  150 (344)
T ss_dssp             ------TCSEEEECCCCCCH---H---HHHHSHHHHHHHHHHHHHHHHHHHHHT----T-CSEEEEECCGGGSSC---CS
T ss_pred             ------cCCEEEECCCCCCC---C---chhcCHHHHHHHHHHHHHHHHHHHHhC----C-CCEEEEecCCccCCC---cc
Confidence                  79999999997542   1   122345789999999999999998763    3 579999999876544   47


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcC-CC------CC-CCCCCCChHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE-PQ------TP-LEGVVLRAGHVA  236 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~-~~------~~-~~~~~~~~edva  236 (264)
                      .|+.+|++.+.+++.++.++++.|++++++.||.+.++....     .+.+..... ..      .+ ..+.+++++|+|
T Consensus       151 ~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~-----i~~~~~~~~~g~~~~~i~~~~~~r~~i~v~D~a  225 (344)
T 2gn4_A          151 LYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSV-----VPFFKKLVQNKASEIPITDIRMTRFWITLDEGV  225 (344)
T ss_dssp             HHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSH-----HHHHHHHHHHTCCCEEESCTTCEEEEECHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCH-----HHHHHHHHHcCCCceEEeCCCeEEeeEEHHHHH
Confidence            899999999999999999888889999999999999864211     111111110 00      11 113478999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCe
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ++++.++...   ..|+.+.++++
T Consensus       226 ~~v~~~l~~~---~~g~~~~~~~~  246 (344)
T 2gn4_A          226 SFVLKSLKRM---HGGEIFVPKIP  246 (344)
T ss_dssp             HHHHHHHHHC---CSSCEEEECCC
T ss_pred             HHHHHHHhhc---cCCCEEecCCC
Confidence            9999998643   36888888876

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.94  E-value=7e-27  Score=190.43  Aligned_cols=199  Identities=15%  Similarity=0.142  Sum_probs=150.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.+|++|||||+|+||++++++|+++|+  +|+++.|+.++.....     ...+.++.+|++|.+++.++++      
T Consensus        15 ~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-----~~~~~~~~~D~~d~~~~~~~~~------   83 (242)
T 2bka_A           15 RMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAFQ------   83 (242)
T ss_dssp             HHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGGS------
T ss_pred             hhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-----cCCceEEecCcCCHHHHHHHhc------
Confidence            46789999999999999999999999999  9998888765432110     1257889999999988777654      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                       ++|+||||||....         ...+++.+++|+.++..+++.+    .+.+ .++||++||..+..+  +...|+.+
T Consensus        84 -~~d~vi~~ag~~~~---------~~~~~~~~~~n~~~~~~~~~~~----~~~~-~~~iv~~SS~~~~~~--~~~~Y~~s  146 (242)
T 2bka_A           84 -GHDVGFCCLGTTRG---------KAGAEGFVRVDRDYVLKSAELA----KAGG-CKHFNLLSSKGADKS--SNFLYLQV  146 (242)
T ss_dssp             -SCSEEEECCCCCHH---------HHHHHHHHHHHTHHHHHHHHHH----HHTT-CCEEEEECCTTCCTT--CSSHHHHH
T ss_pred             -CCCEEEECCCcccc---------cCCcccceeeeHHHHHHHHHHH----HHCC-CCEEEEEccCcCCCC--CcchHHHH
Confidence             79999999996422         2357889999999998888875    3444 579999999987653  45689999


Q ss_pred             HHHHHHHHHHHHHHhCcCCc-eEEEeeCCcccCcccccccCCChHHHHhhcCCCCC---CCCCCCChHHHHHHHHHHhCC
Q 041914          170 KHAVIGLVRSASVQLGVHGI-RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP---LEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++++.+++.+       ++ ++++|+||.+.|++....   ..+..........|   ..+++++++|+|+++++++++
T Consensus       147 K~~~e~~~~~~-------~~~~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~  216 (242)
T 2bka_A          147 KGEVEAKVEEL-------KFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVR  216 (242)
T ss_dssp             HHHHHHHHHTT-------CCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHhc-------CCCCeEEEcCceecCCCCCCc---HHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhC
Confidence            99999998754       45 799999999999864321   11222222222233   125788999999999999976


Q ss_pred             CCC
Q 041914          246 DSE  248 (264)
Q Consensus       246 ~~~  248 (264)
                      ...
T Consensus       217 ~~~  219 (242)
T 2bka_A          217 PRD  219 (242)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            544

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.94  E-value=1.1e-25  Score=191.87  Aligned_cols=224  Identities=15%  Similarity=0.047  Sum_probs=164.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           15 GKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++++|||||+|+||++++++|+++|  ++|+++.|.... ..+.+.+.....++.++.+|++|.+++.+++.       +
T Consensus         3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~   75 (336)
T 2hun_A            3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVR-------K   75 (336)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHH-------T
T ss_pred             CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhh-------C
Confidence            4679999999999999999999997  888888875421 11112111123468899999999999888873       7


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GG  160 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~  160 (264)
                      +|+|||+||....      +.+.+++++.+++|+.++.++++++.+.  . . .++||++||.....           +.
T Consensus        76 ~d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~--~-~-~~~iv~~SS~~vyg~~~~~~~~E~~~~  145 (336)
T 2hun_A           76 VDGVVHLAAESHV------DRSISSPEIFLHSNVIGTYTLLESIRRE--N-P-EVRFVHVSTDEVYGDILKGSFTENDRL  145 (336)
T ss_dssp             CSEEEECCCCCCH------HHHHHCTHHHHHHHHHHHHHHHHHHHHH--C-T-TSEEEEEEEGGGGCCCSSSCBCTTBCC
T ss_pred             CCEEEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHh--C-C-CcEEEEeccHHHHCCCCCCCcCCCCCC
Confidence            9999999997532      1234567889999999999999999875  2 1 36999999975421           34


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC--C------CCCCCCCh
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT--P------LEGVVLRA  232 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~  232 (264)
                      ++...|+.+|.+.+.+++.++.++   |++++.++||.+.++.....  ..............  +      ....++.+
T Consensus       146 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  220 (336)
T 2hun_A          146 MPSSPYSATKAASDMLVLGWTRTY---NLNASITRCTNNYGPYQFPE--KLIPKTIIRASLGLKIPIYGTGKNVRDWLYV  220 (336)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHT---TCEEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCEEEETC---CEEEEEH
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeeeeeCcCCCcC--chHHHHHHHHHcCCCceEeCCCCceeeeEEH
Confidence            567789999999999999999875   79999999999999864211  01111211111111  1      11457889


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +|+|+++++++.+.   .+|+.|++++|..+
T Consensus       221 ~Dva~~~~~~~~~~---~~g~~~~v~~~~~~  248 (336)
T 2hun_A          221 EDHVRAIELVLLKG---ESREIYNISAGEEK  248 (336)
T ss_dssp             HHHHHHHHHHHHHC---CTTCEEEECCSCEE
T ss_pred             HHHHHHHHHHHhCC---CCCCEEEeCCCCcc
Confidence            99999999998643   47999999998643

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.94  E-value=8.7e-26  Score=193.21  Aligned_cols=227  Identities=17%  Similarity=0.183  Sum_probs=166.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +++|||||+|+||++++++|+++|++|+++.|...+ ...........+++.++.+|++|.+++.++++..     ++|+
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (347)
T 1orr_A            2 AKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDS   76 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             cEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhcc-----CCCE
Confidence            579999999999999999999999999888875322 1122222222245888999999999999888752     6999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------------  158 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------------  158 (264)
                      |||+||....      +.+.+++++.+++|+.++.++++++.+...    .++||++||.....                
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~----~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~  146 (347)
T 1orr_A           77 CFHLAGQVAM------TTSIDNPCMDFEINVGGTLNLLEAVRQYNS----NCNIIYSSTNKVYGDLEQYKYNETETRYTC  146 (347)
T ss_dssp             EEECCCCCCH------HHHHHCHHHHHHHHHHHHHHHHHHHHHHCT----TCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred             EEECCcccCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhCC----CceEEEeccHHHhCCCCcCCcccccccccc
Confidence            9999996432      123457889999999999999999987542    36999999976432                


Q ss_pred             -----------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-hHHHHh-hcCCCC--
Q 041914          159 -----------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-ADEVEK-LFEPQT--  223 (264)
Q Consensus       159 -----------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~-~~~~~~--  223 (264)
                                 +.++...|+.+|.+.+.+++.++.++   |++++++.||.+.++......... ...... ......  
T Consensus       147 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (347)
T 1orr_A          147 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIF---GLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  223 (347)
T ss_dssp             TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             cccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccC
Confidence                       23456789999999999999999886   799999999999998653211000 111111 110000  


Q ss_pred             --C--------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          224 --P--------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       224 --~--------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                        |        ....++.++|+|+++++++.. ....+|+.|++++|.
T Consensus       224 ~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~-~~~~~g~~~~v~~~~  270 (347)
T 1orr_A          224 NKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGTI  270 (347)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSCG
T ss_pred             CCCeEEecCCcceEeeEEHHHHHHHHHHHHhc-cccCCCCEEEeCCCC
Confidence              1        112377999999999999853 245789999999984

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.94  E-value=3.2e-25  Score=178.31  Aligned_cols=190  Identities=9%  Similarity=0.045  Sum_probs=145.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHH-HcCCcEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFA-DHGARMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~-~~g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++|||||+|+||++++++|+ +.|++|+++.|+.+ +..+ +..  ...++.++++|++|.+++.++++       ++|
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~-~~~--~~~~~~~~~~D~~d~~~~~~~~~-------~~d   75 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP-EII--DHERVTVIEGSFQNPGXLEQAVT-------NAE   75 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCH-HHH--TSTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchh-hcc--CCCceEEEECCCCCHHHHHHHHc-------CCC
Confidence            789999999999999999999 89999999888765 3322 211  22468899999999999988876       789


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc---------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT---------  164 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~---------  164 (264)
                      +||||+|..                     |+.     ++.+++.|++.+ .++||++||..+..+.+...         
T Consensus        76 ~vv~~ag~~---------------------n~~-----~~~~~~~~~~~~-~~~iv~iSs~~~~~~~~~~~~~~~~~~~~  128 (221)
T 3r6d_A           76 VVFVGAMES---------------------GSD-----MASIVKALSRXN-IRRVIGVSMAGLSGEFPVALEKWTFDNLP  128 (221)
T ss_dssp             EEEESCCCC---------------------HHH-----HHHHHHHHHHTT-CCEEEEEEETTTTSCSCHHHHHHHHHTSC
T ss_pred             EEEEcCCCC---------------------Chh-----HHHHHHHHHhcC-CCeEEEEeeceecCCCCcccccccccccc
Confidence            999999842                     222     788888888876 68999999999887665444         


Q ss_pred             -hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc-ccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          165 -DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP-LTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       165 -~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                       .|+.+|.+++.+.+.       .||+++.|+||++.++ ......         ......+..+..++++|+|++++++
T Consensus       129 ~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~~---------~~~~~~~~~~~~~~~~dvA~~~~~l  192 (221)
T 3r6d_A          129 ISYVQGERQARNVLRE-------SNLNYTILRLTWLYNDPEXTDYE---------LIPEGAQFNDAQVSREAVVKAIFDI  192 (221)
T ss_dssp             HHHHHHHHHHHHHHHH-------SCSEEEEEEECEEECCTTCCCCE---------EECTTSCCCCCEEEHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHh-------CCCCEEEEechhhcCCCCCccee---------eccCCccCCCceeeHHHHHHHHHHH
Confidence             899999999887753       5899999999999887 221110         0111223334578999999999999


Q ss_pred             h--CCCCCCeeccEEEec
Q 041914          243 A--CRDSEFVTGHDLVVD  258 (264)
Q Consensus       243 ~--s~~~~~~~G~~i~~d  258 (264)
                      +  ++...++++.....+
T Consensus       193 ~~~~~~~~~~~~~~~i~~  210 (221)
T 3r6d_A          193 LHAADETPFHRTSIGVGE  210 (221)
T ss_dssp             HTCSCCGGGTTEEEEEEC
T ss_pred             HHhcChhhhhcceeeecC
Confidence            9  877667666544443

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.94  E-value=3.3e-26  Score=193.96  Aligned_cols=219  Identities=16%  Similarity=0.114  Sum_probs=165.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ..+.+++|||||+|+||++++++|+++|++|+++.|.... ..     +   .+.++.+|++|.+++.++++.     ++
T Consensus         9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~-----l---~~~~~~~Dl~d~~~~~~~~~~-----~~   74 (321)
T 2pk3_A            9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KL-----P---NVEMISLDIMDSQRVKKVISD-----IK   74 (321)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CC-----T---TEEEEECCTTCHHHHHHHHHH-----HC
T ss_pred             ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-cc-----c---eeeEEECCCCCHHHHHHHHHh-----cC
Confidence            3567999999999999999999999999999988887654 11     1   578899999999999988875     36


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------------
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------------  159 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------------  159 (264)
                      +|+|||+||.....      .+.+++++.+++|+.++.++++++ +.+.  + .++||++||.....+            
T Consensus        75 ~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~l~~a~-~~~~--~-~~~iv~~SS~~v~g~~~~~~~~~~E~~  144 (321)
T 2pk3_A           75 PDYIFHLAAKSSVK------DSWLNKKGTFSTNVFGTLHVLDAV-RDSN--L-DCRILTIGSSEEYGMILPEESPVSEEN  144 (321)
T ss_dssp             CSEEEECCSCCCHH------HHTTCHHHHHHHHHHHHHHHHHHH-HHHT--C-CCEEEEEEEGGGTBSCCGGGCSBCTTS
T ss_pred             CCEEEEcCcccchh------hhhhcHHHHHHHHHHHHHHHHHHH-HHhC--C-CCeEEEEccHHhcCCCCCCCCCCCCCC
Confidence            99999999975321      122357899999999999999998 5552  2 579999999875432            


Q ss_pred             -CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhc--------------CCCCC
Q 041914          160 -GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF--------------EPQTP  224 (264)
Q Consensus       160 -~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~--------------~~~~~  224 (264)
                       .++...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....  .....+....              ....+
T Consensus       145 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  219 (321)
T 2pk3_A          145 QLRPMSPYGVSKASVGMLARQYVKAY---GMDIIHTRTFNHIGPGQSLG--FVTQDFAKQIVDIEMEKQEPIIKVGNLEA  219 (321)
T ss_dssp             CCBCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHHTTSSCSEEEESCSSC
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHc---CCCEEEEEeCcccCcCCCCC--chHHHHHHHHHHHhcCCCCCeEEeCCCCc
Confidence             2467889999999999999998875   89999999999998865321  0011111111              11111


Q ss_pred             CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          225 LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       225 ~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      . ..+++++|+|+++++++...   .+|+.|++++|..+
T Consensus       220 ~-~~~v~v~Dva~a~~~~~~~~---~~g~~~~i~~~~~~  254 (321)
T 2pk3_A          220 V-RDFTDVRDIVQAYWLLSQYG---KTGDVYNVCSGIGT  254 (321)
T ss_dssp             E-EEEEEHHHHHHHHHHHHHHC---CTTCEEEESCSCEE
T ss_pred             E-EeeEEHHHHHHHHHHHHhCC---CCCCeEEeCCCCCe
Confidence            2 45789999999999999654   47899999988643

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.93  E-value=2.3e-26  Score=195.92  Aligned_cols=220  Identities=20%  Similarity=0.156  Sum_probs=157.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+.+++++++|||||+|+||++++++|+++|++|+++.|+.....+.. +.+  .++.++.+|++|.+++.++++++   
T Consensus        14 ~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~l--~~v~~~~~Dl~d~~~~~~~~~~~---   87 (330)
T 2pzm_A           14 LVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-PPV--AGLSVIEGSVTDAGLLERAFDSF---   87 (330)
T ss_dssp             CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-CSC--TTEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-hcc--CCceEEEeeCCCHHHHHHHHhhc---
Confidence            355688999999999999999999999999999999888654332111 111  36889999999999999888765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-----C--
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-----K--  161 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-----~--  161 (264)
                        ++|+||||||.....       +.++++  +++|+.++.++++++..    .+ .++||++||.....+.     +  
T Consensus        88 --~~D~vih~A~~~~~~-------~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~~~~~~~~~~~~  151 (330)
T 2pzm_A           88 --KPTHVVHSAAAYKDP-------DDWAED--AATNVQGSINVAKAASK----AG-VKRLLNFQTALCYGRPATVPIPID  151 (330)
T ss_dssp             --CCSEEEECCCCCSCT-------TCHHHH--HHHHTHHHHHHHHHHHH----HT-CSEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             --CCCEEEECCccCCCc-------cccChh--HHHHHHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCccCCCCcC
Confidence              799999999975431       334565  99999999999999863    23 5799999998775433     2  


Q ss_pred             ----CCchhhchHHHHHHHHHHHHHHhCcCCce-EEEeeCCcccCcccccccCCChHHHHh---hcCCCCCCCCCCCChH
Q 041914          162 ----RRTDYHMSKHAVIGLVRSASVQLGVHGIR-VNCVSPHGLATPLTCHAYGMPADEVEK---LFEPQTPLEGVVLRAG  233 (264)
Q Consensus       162 ----~~~~y~~sK~al~~~~~~la~e~~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~e  233 (264)
                          +...|+.+|++.+.+++.+  ++....|| .+.+.||. .+.+.....    .....   .+....  ...+++++
T Consensus       152 E~~~~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~-~~~~~~~~~----~~~~~~~~~~~~~~--~~~~i~~~  222 (330)
T 2pzm_A          152 SPTAPFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRL-AIGPIPTFY----KRLKAGQKCFCSDT--VRDFLDMS  222 (330)
T ss_dssp             CCCCCCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTC-CSSHHHHHH----HHHHTTCCCCEESC--EECEEEHH
T ss_pred             CCCCCCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCC-CCCHHHHHH----HHHHcCCEEeCCCC--EecceeHH
Confidence                6678999999999999877  44334455 55666664 333221100    00000   000001  25678999


Q ss_pred             HHHH-HHHHHhCCCCCCeeccEEEecCeeec
Q 041914          234 HVAD-AVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       234 dva~-~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |+|+ ++++++....    |+.|++++|..+
T Consensus       223 Dva~~a~~~~~~~~~----g~~~~v~~~~~~  249 (330)
T 2pzm_A          223 DFLAIADLSLQEGRP----TGVFNVSTGEGH  249 (330)
T ss_dssp             HHHHHHHHHTSTTCC----CEEEEESCSCCE
T ss_pred             HHHHHHHHHHhhcCC----CCEEEeCCCCCC
Confidence            9999 9999987532    899999998643

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.93  E-value=8.5e-26  Score=193.03  Aligned_cols=225  Identities=14%  Similarity=0.071  Sum_probs=162.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH-HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ++|++|||||+|+||++++++|+++|++|+++.|+..+.. ..+.......++.++.+|++|.+++.++++.+     ++
T Consensus         2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   76 (345)
T 2z1m_A            2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKV-----QP   76 (345)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHH-----CC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhc-----CC
Confidence            5789999999999999999999999999999888765432 22222222236889999999999999988866     78


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------CCCC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------CGGK  161 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------~~~~  161 (264)
                      |+||||||.....      .+.+++++.+++|+.++.++++++.+ +   +..++||++||...+           .+.+
T Consensus        77 d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~l~~a~~~-~---~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~  146 (345)
T 2z1m_A           77 DEVYNLAAQSFVG------VSFEQPILTAEVDAIGVLRILEALRT-V---KPDTKFYQASTSEMFGKVQEIPQTEKTPFY  146 (345)
T ss_dssp             SEEEECCCCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHH-H---CTTCEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CEEEECCCCcchh------hhhhCHHHHHHHHHHHHHHHHHHHHH-h---CCCceEEEEechhhcCCCCCCCCCccCCCC
Confidence            9999999975321      22346889999999999999999874 2   213799999998542           3445


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhC---cCCceEEEeeCCcccCcccccccCCChHHHHhh--------cCCCCCCCCCCC
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLG---VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL--------FEPQTPLEGVVL  230 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~---~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~  230 (264)
                      +...|+.+|++.+.+++.++.+++   ..++.++.+.||...+.+.....    ......        .....+....++
T Consensus       147 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (345)
T 2z1m_A          147 PRSPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKIT----YSLARIKYGLQDKLVLGNLNAKRDWG  222 (345)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHH----HHHHHHHTTSCSCEEESCTTCEECCE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHH----HHHHHHHcCCCCeeeeCCCCceeeeE
Confidence            678899999999999999999875   33456778889887776532110    000000        011112223488


Q ss_pred             ChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      .++|+|+++++++....    ++.+++.+|.
T Consensus       223 ~v~Dva~a~~~~~~~~~----~~~~~i~~~~  249 (345)
T 2z1m_A          223 YAPEYVEAMWLMMQQPE----PDDYVIATGE  249 (345)
T ss_dssp             EHHHHHHHHHHHHTSSS----CCCEEECCSC
T ss_pred             EHHHHHHHHHHHHhCCC----CceEEEeCCC
Confidence            99999999999997542    3567776664

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.93  E-value=2.7e-25  Score=189.71  Aligned_cols=227  Identities=13%  Similarity=0.044  Sum_probs=165.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEE-EecCCCHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYV-HCDVTNECQVKALVDSTV   86 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~D~s~~~~~~~~~~~~~   86 (264)
                      ..++++++|||||+|+||++++++|+++|++|+++.|+..+.. .+.+..   ...++.++ .+|++|.+++.++++   
T Consensus         7 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~---   82 (342)
T 1y1p_A            7 VLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLA-NLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK---   82 (342)
T ss_dssp             SSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT---
T ss_pred             cCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHH-HHHHHhhccCCCceEEEEecCCcChHHHHHHHc---
Confidence            4478899999999999999999999999999888888765432 222221   12367788 899999887776654   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-CC-----
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-GG-----  160 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~~-----  160 (264)
                          ++|+|||||+.....         +++++.+++|+.++.++++++.+   ..+ .+++|++||..... +.     
T Consensus        83 ----~~d~vih~A~~~~~~---------~~~~~~~~~n~~g~~~ll~~~~~---~~~-~~~iv~~SS~~~~~~~~~~~~~  145 (342)
T 1y1p_A           83 ----GAAGVAHIASVVSFS---------NKYDEVVTPAIGGTLNALRAAAA---TPS-VKRFVLTSSTVSALIPKPNVEG  145 (342)
T ss_dssp             ----TCSEEEECCCCCSCC---------SCHHHHHHHHHHHHHHHHHHHHT---CTT-CCEEEEECCGGGTCCCCTTCCC
T ss_pred             ----CCCEEEEeCCCCCCC---------CCHHHHHHHHHHHHHHHHHHHHh---CCC-CcEEEEeccHHHhcCCCCCCCC
Confidence                799999999976432         14678999999999999998864   223 57999999987652 21     


Q ss_pred             -------------------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-ChHH
Q 041914          161 -------------------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-PADE  214 (264)
Q Consensus       161 -------------------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~  214 (264)
                                               .+...|+.+|.+.+.+++.++.+++. ++++++++||.+.+++....... ....
T Consensus       146 ~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~~~~~~~~~~~  224 (342)
T 1y1p_A          146 IYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFDPETQSGSTSG  224 (342)
T ss_dssp             CEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSCTTTCCCHHHH
T ss_pred             cccCccccCchhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCCCCCCCccHHH
Confidence                                     13467999999999999999999876 89999999999999875432111 1111


Q ss_pred             HHhhcCCCCC-------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          215 VEKLFEPQTP-------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       215 ~~~~~~~~~~-------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +...+....+       ....++.++|+|++++.++..  ...+|+.+..+|+.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~--~~~~g~~~~~~g~~  276 (342)
T 1y1p_A          225 WMMSLFNGEVSPALALMPPQYYVSAVDIGLLHLGCLVL--PQIERRRVYGTAGT  276 (342)
T ss_dssp             HHHHHHTTCCCHHHHTCCSEEEEEHHHHHHHHHHHHHC--TTCCSCEEEECCEE
T ss_pred             HHHHHHcCCCccccccCCcCCEeEHHHHHHHHHHHHcC--cccCCceEEEeCCC
Confidence            1111111110       125678999999999998853  34678777777653

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.93  E-value=1.8e-25  Score=192.42  Aligned_cols=227  Identities=16%  Similarity=0.109  Sum_probs=166.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|+||++++++|+++ |++|+++.|... ...+.+.+.....++.++.+|++|.+++.+++++.     ++|+
T Consensus         2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~d~   76 (361)
T 1kew_A            2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhc-----CCCE
Confidence            5899999999999999999998 799888887642 11111222212346889999999999999888753     7999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC----CCcEEEEecCCCCCC------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG----VRGSIVCTASVAGSC------------  158 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~----~~~~iv~iss~~~~~------------  158 (264)
                      ||||||....      +.+.+++++.+++|+.++.++++++.+.|...+    ..++||++||.....            
T Consensus        77 vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~  150 (361)
T 1kew_A           77 VMHLAAESHV------DRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEECCSCCCH------HHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEECCCCcCh------hhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccc
Confidence            9999997532      134456788999999999999999999875310    024999999965321            


Q ss_pred             ---------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhc-CCC-CC---
Q 041914          159 ---------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF-EPQ-TP---  224 (264)
Q Consensus       159 ---------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~-~~---  224 (264)
                               +.++...|+.+|++.+.+++.++.++   |+++++++||.+.++.....  .......... ... .+   
T Consensus       151 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~  225 (361)
T 1kew_A          151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCCEEEET
T ss_pred             cCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCCCcc--cHHHHHHHHHHcCCCceEcC
Confidence                     23456789999999999999999886   79999999999999874311  0111111111 110 00   


Q ss_pred             ---CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 ---LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 ---~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                         ....++.++|+|+++++++.+.   .+|+.|++++|..
T Consensus       226 ~~~~~~~~i~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  263 (361)
T 1kew_A          226 KGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHNE  263 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             CCceeEeeEEHHHHHHHHHHHHhCC---CCCCEEEecCCCe
Confidence               1145789999999999998643   4799999999864

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.93  E-value=2.8e-25  Score=189.77  Aligned_cols=232  Identities=13%  Similarity=0.066  Sum_probs=165.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .++++|||||+|+||++++++|+++|++|+++.|+.....+...+..  ....+.++.+|++|.+++.+++++     ++
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~-----~~   78 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA-----HP   78 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH-----SC
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc-----cC
Confidence            45799999999999999999999999999998887654433322221  123678999999999999998875     47


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------CCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------CGG  160 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------~~~  160 (264)
                      +|+||||||.....      ...+...+.+++|+.++.++++.+    ++.+ .++||++||....           .+.
T Consensus        79 ~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~----~~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~  147 (341)
T 3enk_A           79 ITAAIHFAALKAVG------ESVAKPIEYYRNNLDSLLSLLRVM----RERA-VKRIVFSSSATVYGVPERSPIDETFPL  147 (341)
T ss_dssp             CCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHH----HHTT-CCEEEEEEEGGGBCSCSSSSBCTTSCC
T ss_pred             CcEEEECccccccC------ccccChHHHHHHHHHHHHHHHHHH----HhCC-CCEEEEEecceEecCCCCCCCCCCCCC
Confidence            99999999975432      123445678999999998877764    4444 5799999997654           223


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--------ChHHHHhhcCCC-CC-------
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--------PADEVEKLFEPQ-TP-------  224 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--------~~~~~~~~~~~~-~~-------  224 (264)
                      .+...|+.+|.+.+.+++.++.++.  +++++++.|+.+.++......+.        ............ .+       
T Consensus       148 ~~~~~Y~~sK~~~e~~~~~~~~~~~--~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  225 (341)
T 3enk_A          148 SATNPYGQTKLMAEQILRDVEAADP--SWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSD  225 (341)
T ss_dssp             BCSSHHHHHHHHHHHHHHHHHHHCT--TCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSC
T ss_pred             CCCChhHHHHHHHHHHHHHHhhcCC--CceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCc
Confidence            3457899999999999999998863  59999999999887743211110        011111111111 00       


Q ss_pred             -------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          225 -------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       225 -------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                             ....++.++|+|++++.++........|+.|++++|..+
T Consensus       226 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~  271 (341)
T 3enk_A          226 YPTPDGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGY  271 (341)
T ss_dssp             SSSTTSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCE
T ss_pred             cCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCce
Confidence                   113477889999999998864223356899999987643

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.93  E-value=2.6e-25  Score=190.92  Aligned_cols=231  Identities=13%  Similarity=0.017  Sum_probs=169.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh---hHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---LGRQVATSIG---VGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      ..++.++++|||||+|+||++++++|+++|++|+++.|+...   ....+.+...   ..++.++.+|++|.+++.++++
T Consensus        22 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~  101 (352)
T 1sb8_A           22 ELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA  101 (352)
T ss_dssp             HHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT
T ss_pred             hcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc
Confidence            345778999999999999999999999999999998886542   1222222221   1368899999999998888776


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC---
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG---  160 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~---  160 (264)
                             ++|+|||+||.....      .+.+++++.+++|+.++.++++++.+    .+ .+++|++||.....+.   
T Consensus       102 -------~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~~~~~~  163 (352)
T 1sb8_A          102 -------GVDYVLHQAALGSVP------RSINDPITSNATNIDGFLNMLIAARD----AK-VQSFTYAASSSTYGDHPGL  163 (352)
T ss_dssp             -------TCSEEEECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGTTCCCS
T ss_pred             -------CCCEEEECCcccCch------hhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHhcCCCCCC
Confidence                   799999999975321      13457889999999999999998864    23 5799999998765433   


Q ss_pred             --------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHhhcCCCCC------
Q 041914          161 --------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEKLFEPQTP------  224 (264)
Q Consensus       161 --------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~------  224 (264)
                              .+...|+.+|.+.+.+++.++.++   |++++++.||.+.++......  ......+........+      
T Consensus       164 ~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  240 (352)
T 1sb8_A          164 PKVEDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGD  240 (352)
T ss_dssp             SBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESS
T ss_pred             CCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCC
Confidence                    246789999999999999998886   799999999999988643210  0011112111111111      


Q ss_pred             --CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 --LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 --~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                        ....++.++|+|++++.++.. .....|+.|++++|..
T Consensus       241 g~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~ni~~~~~  279 (352)
T 1sb8_A          241 GETSRDFCYIENTVQANLLAATA-GLDARNQVYNIAVGGR  279 (352)
T ss_dssp             SCCEECCEEHHHHHHHHHHHHTC-CGGGCSEEEEESCSCC
T ss_pred             CCceEeeEEHHHHHHHHHHHHhc-cccCCCceEEeCCCCC
Confidence              113578999999999998864 2345789999998754

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.93  E-value=1.2e-24  Score=187.09  Aligned_cols=232  Identities=16%  Similarity=0.075  Sum_probs=168.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ++++++|||||+|+||++++++|+++|++|+++.|+..+............++.++.+|++|.+++.++++..     ++
T Consensus         7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   81 (357)
T 1rkx_A            7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   81 (357)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc-----CC
Confidence            5689999999999999999999999999999998876543222211111236789999999999999888765     69


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------CC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------GG  160 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------~~  160 (264)
                      |+|||+||...      .+.+.+++++.+++|+.++.++++++.+.   .. .+++|++||...+.            +.
T Consensus        82 d~vih~A~~~~------~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~-~~~~v~~SS~~vyg~~~~~~~~~E~~~~  151 (357)
T 1rkx_A           82 EIVFHMAAQPL------VRLSYSEPVETYSTNVMGTVYLLEAIRHV---GG-VKAVVNITSDKCYDNKEWIWGYRENEAM  151 (357)
T ss_dssp             SEEEECCSCCC------HHHHHHCHHHHHHHHTHHHHHHHHHHHHH---CC-CCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             CEEEECCCCcc------cccchhCHHHHHHHHHHHHHHHHHHHHHh---CC-CCeEEEecCHHHhCCCCcCCCCCCCCCC
Confidence            99999999632      12345678899999999999999998763   22 46999999986321            33


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhC------cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC------C-CCC
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLG------VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT------P-LEG  227 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~------~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~------~-~~~  227 (264)
                      .+...|+.+|.+.+.+++.++.++.      +.|++++++.||.+.++..... ......+........      + ...
T Consensus       152 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~  230 (357)
T 1rkx_A          152 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWAL-DRIVPDILRAFEQSQPVIIRNPHAIR  230 (357)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCS-SCHHHHHHHHHHTTCCEECSCTTCEE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCcc-ccHHHHHHHHHhcCCCEEECCCCCee
Confidence            4677899999999999999999885      4589999999999998753210 001122222111111      1 113


Q ss_pred             CCCChHHHHHHHHHHhCCC--CCCeeccEEEecCe
Q 041914          228 VVLRAGHVADAVLFLACRD--SEFVTGHDLVVDGG  260 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~--~~~~~G~~i~~dgG  260 (264)
                      .++.++|++++++.++...  .....|+.+++.+|
T Consensus       231 ~~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~  265 (357)
T 1rkx_A          231 PWQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPN  265 (357)
T ss_dssp             CCEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCC
T ss_pred             ccEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCC
Confidence            4788999999999887521  11245778888763

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.92  E-value=2.7e-24  Score=184.05  Aligned_cols=233  Identities=11%  Similarity=0.015  Sum_probs=159.6

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      +.++++.+.++++|||||+|+||.+++++|+++|  +.|+.+.|.... ....+.......++.++.+|++|.+++.+++
T Consensus        15 ~~n~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~   94 (346)
T 4egb_A           15 TENLYFQSNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVI   94 (346)
T ss_dssp             ---------CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHH
T ss_pred             ccccccccCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHH
Confidence            3444666788999999999999999999999999  566666655422 2222222222347899999999999999998


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--  160 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--  160 (264)
                      +..     ++|+|||+|+.....      ...+++++.+++|+.++.++++++..    .+ .+++|++||.......  
T Consensus        95 ~~~-----~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~v~~SS~~vy~~~~~  158 (346)
T 4egb_A           95 KER-----DVQVIVNFAAESHVD------RSIENPIPFYDTNVIGTVTLLELVKK----YP-HIKLVQVSTDEVYGSLGK  158 (346)
T ss_dssp             HHH-----TCCEEEECCCCC---------------CHHHHHHTHHHHHHHHHHHH----ST-TSEEEEEEEGGGGCCCCS
T ss_pred             hhc-----CCCEEEECCcccchh------hhhhCHHHHHHHHHHHHHHHHHHHHh----cC-CCEEEEeCchHHhCCCCc
Confidence            864     699999999976432      24467788999999999999888743    34 5689999997654332  


Q ss_pred             ----------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC------
Q 041914          161 ----------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP------  224 (264)
Q Consensus       161 ----------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~------  224 (264)
                                .+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++.....  .....+........+      
T Consensus       159 ~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~  233 (346)
T 4egb_A          159 TGRFTEETPLAPNSPYSSSKASADMIALAYYKTY---QLPVIVTRCSNNYGPYQYPE--KLIPLMVTNALEGKKLPLYGD  233 (346)
T ss_dssp             SCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--SHHHHHHHHHHTTCCCEEETT
T ss_pred             CCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeecceeCcCCCcc--chHHHHHHHHHcCCCceeeCC
Confidence                      235789999999999999998875   79999999999988754211  111222222111111      


Q ss_pred             --CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 --LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 --~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                        ....++.++|+|++++.++....   .|+.+++.+|..
T Consensus       234 ~~~~~~~i~v~Dva~a~~~~~~~~~---~g~~~~i~~~~~  270 (346)
T 4egb_A          234 GLNVRDWLHVTDHCSAIDVVLHKGR---VGEVYNIGGNNE  270 (346)
T ss_dssp             SCCEECEEEHHHHHHHHHHHHHHCC---TTCEEEECCSCC
T ss_pred             CCeEEeeEEHHHHHHHHHHHHhcCC---CCCEEEECCCCc
Confidence              11245679999999999986543   789999998863

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.92  E-value=5.6e-25  Score=176.66  Aligned_cols=192  Identities=15%  Similarity=0.181  Sum_probs=152.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++|||||+|+||++++++|+++|++|+++.|+.++....       ..+.++.+|++| .+++.++++       ++|+|
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~-------~~d~v   67 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLH-------GMDAI   67 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTT-------TCSEE
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHc-------CCCEE
Confidence            689999999999999999999999999999987643221       368999999999 888877765       79999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC-------Cchhhc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-------RTDYHM  168 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~-------~~~y~~  168 (264)
                      |||+|....              +.+++|+.++.++++++    ++.+ .+++|++||..+..+.+.       ...|+.
T Consensus        68 i~~ag~~~~--------------~~~~~n~~~~~~l~~a~----~~~~-~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~  128 (219)
T 3dqp_A           68 INVSGSGGK--------------SLLKVDLYGAVKLMQAA----EKAE-VKRFILLSTIFSLQPEKWIGAGFDALKDYYI  128 (219)
T ss_dssp             EECCCCTTS--------------SCCCCCCHHHHHHHHHH----HHTT-CCEEEEECCTTTTCGGGCCSHHHHHTHHHHH
T ss_pred             EECCcCCCC--------------CcEeEeHHHHHHHHHHH----HHhC-CCEEEEECcccccCCCcccccccccccHHHH
Confidence            999997642              16788999999888877    3444 579999999988876666       789999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|.+.+.+.+      ...|++++.++||.+.++.......         +.   .....+++++|+|+++++++...  
T Consensus       129 sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~~~~~~~---------~~---~~~~~~i~~~Dva~~i~~~l~~~--  188 (219)
T 3dqp_A          129 AKHFADLYLT------KETNLDYTIIQPGALTEEEATGLID---------IN---DEVSASNTIGDVADTIKELVMTD--  188 (219)
T ss_dssp             HHHHHHHHHH------HSCCCEEEEEEECSEECSCCCSEEE---------ES---SSCCCCEEHHHHHHHHHHHHTCG--
T ss_pred             HHHHHHHHHH------hccCCcEEEEeCceEecCCCCCccc---------cC---CCcCCcccHHHHHHHHHHHHhCc--
Confidence            9999999886      3568999999999998875432211         00   12256889999999999999754  


Q ss_pred             CeeccEEEecCee
Q 041914          249 FVTGHDLVVDGGF  261 (264)
Q Consensus       249 ~~~G~~i~~dgG~  261 (264)
                      ...|+.+++++|.
T Consensus       189 ~~~g~~~~i~~g~  201 (219)
T 3dqp_A          189 HSIGKVISMHNGK  201 (219)
T ss_dssp             GGTTEEEEEEECS
T ss_pred             cccCcEEEeCCCC
Confidence            3559999997663

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.92  E-value=2.6e-24  Score=174.81  Aligned_cols=200  Identities=13%  Similarity=0.123  Sum_probs=137.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|++|||||+|+||++++++|+++| ++|+++.|+.++..+     .....+.++++|++|++++.++++       ++|
T Consensus        23 mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~-----~~~~~~~~~~~Dl~d~~~~~~~~~-------~~D   90 (236)
T 3qvo_A           23 MKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHK-----PYPTNSQIIMGDVLNHAALKQAMQ-------GQD   90 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS-----SCCTTEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             ccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc-----cccCCcEEEEecCCCHHHHHHHhc-------CCC
Confidence            5899999999999999999999999 898888887654321     112368899999999999988876       689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH---
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK---  170 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK---  170 (264)
                      +||||+|...             +           ...++.+++.|++.+ .++||++||..+..+.+....+...+   
T Consensus        91 ~vv~~a~~~~-------------~-----------~~~~~~~~~~~~~~~-~~~iV~iSS~~~~~~~~~~~~~~~~~~~~  145 (236)
T 3qvo_A           91 IVYANLTGED-------------L-----------DIQANSVIAAMKACD-VKRLIFVLSLGIYDEVPGKFVEWNNAVIG  145 (236)
T ss_dssp             EEEEECCSTT-------------H-----------HHHHHHHHHHHHHTT-CCEEEEECCCCC----------------C
T ss_pred             EEEEcCCCCc-------------h-----------hHHHHHHHHHHHHcC-CCEEEEEecceecCCCCcccccchhhccc
Confidence            9999998411             0           133667888888877 68999999988765544321111000   


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      .....+. .....+.+.||++++|+||++.++.....         .......+..+++++++|||+++++++++...++
T Consensus       146 ~~~~~~~-~~~~~l~~~gi~~~~vrPg~i~~~~~~~~---------~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~  215 (236)
T 3qvo_A          146 EPLKPFR-RAADAIEASGLEYTILRPAWLTDEDIIDY---------ELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHI  215 (236)
T ss_dssp             GGGHHHH-HHHHHHHTSCSEEEEEEECEEECCSCCCC---------EEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTT
T ss_pred             chHHHHH-HHHHHHHHCCCCEEEEeCCcccCCCCcce---------EEeccCCCCCCcEECHHHHHHHHHHHHcCccccc
Confidence            0000111 11223446799999999999988754221         1111222333678899999999999998776666


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                       |+.+.++++.+
T Consensus       216 -g~~~~i~~~~~  226 (236)
T 3qvo_A          216 -GENIGINQPGT  226 (236)
T ss_dssp             -TEEEEEECSSC
T ss_pred             -CeeEEecCCCC
Confidence             88999988754

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.92  E-value=2.2e-24  Score=184.74  Aligned_cols=219  Identities=13%  Similarity=0.073  Sum_probs=161.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           16 KVAIITGGASGIGETTARLFADH--GARMIVIADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +++|||||+|+||++++++|+++  |++|+++.|..... .+.+ ......++.++.+|++|.+++.++++       .+
T Consensus         5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   76 (348)
T 1oc2_A            5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL-EAILGDRVELVVGDIADAELVDKLAA-------KA   76 (348)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT-GGGCSSSEEEEECCTTCHHHHHHHHT-------TC
T ss_pred             cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH-hhhccCCeEEEECCCCCHHHHHHHhh-------cC
Confidence            68999999999999999999999  89988888864321 1111 11222468899999999998888775       56


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------------
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------------  158 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------------  158 (264)
                      |+|||+||....      +.+.+++++.+++|+.++.++++++.+.    +  +++|++||.....              
T Consensus        77 d~vih~A~~~~~------~~~~~~~~~~~~~Nv~g~~~l~~a~~~~----~--~~~v~~SS~~vyg~~~~~~~~~~~~~~  144 (348)
T 1oc2_A           77 DAIVHYAAESHN------DNSLNDPSPFIHTNFIGTYTLLEAARKY----D--IRFHHVSTDEVYGDLPLREDLPGHGEG  144 (348)
T ss_dssp             SEEEECCSCCCH------HHHHHCCHHHHHHHTHHHHHHHHHHHHH----T--CEEEEEEEGGGGCCBCCGGGSTTTTCS
T ss_pred             CEEEECCcccCc------cchhhCHHHHHHHHHHHHHHHHHHHHHh----C--CeEEEecccceeCCCcccccccccccc
Confidence            999999997532      1234567889999999999999998764    3  3999999975321              


Q ss_pred             ---------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh-cCCC------
Q 041914          159 ---------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL-FEPQ------  222 (264)
Q Consensus       159 ---------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~------  222 (264)
                               +.++...|+.+|.+.+.+++.++.++   |++++++.||.+.++.....  ......... ....      
T Consensus       145 ~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~  219 (348)
T 1oc2_A          145 PGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIE--KFIPRQITNILAGIKPKLYG  219 (348)
T ss_dssp             TTSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTT--SHHHHHHHHHHHTCCCEEET
T ss_pred             cCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEeeceeeCCCCCcc--chHHHHHHHHHcCCCceEec
Confidence                     23456789999999999999998886   79999999999998865311  011111111 1111      


Q ss_pred             -CCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          223 -TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       223 -~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                       ......+++++|+|+++++++.+.   .+|+.|++++|..
T Consensus       220 ~~~~~~~~i~v~Dva~~~~~~~~~~---~~g~~~~i~~~~~  257 (348)
T 1oc2_A          220 EGKNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGADGE  257 (348)
T ss_dssp             TSCCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCSCE
T ss_pred             CCCceEeeEEHHHHHHHHHHHhhCC---CCCCeEEeCCCCC
Confidence             011145789999999999998643   4799999998854

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.92  E-value=1.5e-24  Score=177.30  Aligned_cols=216  Identities=10%  Similarity=0.094  Sum_probs=154.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADH--GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..+|++|||||+|+||++++++|+++  |++|+++.|+..+... +     ..++.++.+|++|.+++.++++       
T Consensus         2 ~~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~-~-----~~~~~~~~~D~~d~~~~~~~~~-------   68 (253)
T 1xq6_A            2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-I-----GGEADVFIGDITDADSINPAFQ-------   68 (253)
T ss_dssp             CSCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHH-T-----TCCTTEEECCTTSHHHHHHHHT-------
T ss_pred             CCCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhh-c-----CCCeeEEEecCCCHHHHHHHHc-------
Confidence            35689999999999999999999999  8999888887544321 1     2356789999999999888875       


Q ss_pred             CccEEEEcCCCCCCCCC-------CccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           91 QLDIMFSNAGILSSSDQ-------TVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      ++|+||||+|.......       ...+...+.+++.+++|+.++.++++++..    .+ .++||++||..+..+.++.
T Consensus        69 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~iv~~SS~~~~~~~~~~  143 (253)
T 1xq6_A           69 GIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV----AG-VKHIVVVGSMGGTNPDHPL  143 (253)
T ss_dssp             TCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH----HT-CSEEEEEEETTTTCTTCGG
T ss_pred             CCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH----cC-CCEEEEEcCccCCCCCCcc
Confidence            68999999997642100       001122344567889999999998887754    23 5799999999887665555


Q ss_pred             chhh-----chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          164 TDYH-----MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       164 ~~y~-----~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      ..|+     .+|.+++.+++.       .|+++++++||.+.++...... ...........   . ..++++++|+|++
T Consensus       144 ~~~~~~~y~~sK~~~e~~~~~-------~~i~~~~vrpg~v~~~~~~~~~-~~~~~~~~~~~---~-~~~~~~~~Dva~~  211 (253)
T 1xq6_A          144 NKLGNGNILVWKRKAEQYLAD-------SGTPYTIIRAGGLLDKEGGVRE-LLVGKDDELLQ---T-DTKTVPRADVAEV  211 (253)
T ss_dssp             GGGGGCCHHHHHHHHHHHHHT-------SSSCEEEEEECEEECSCSSSSC-EEEESTTGGGG---S-SCCEEEHHHHHHH
T ss_pred             ccccchhHHHHHHHHHHHHHh-------CCCceEEEecceeecCCcchhh-hhccCCcCCcC---C-CCcEEcHHHHHHH
Confidence            5454     589999887753       5899999999999987532110 00000000111   1 1457899999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCe
Q 041914          239 VLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      +++++...  ..+|+.+++++|
T Consensus       212 ~~~~~~~~--~~~g~~~~i~~~  231 (253)
T 1xq6_A          212 CIQALLFE--EAKNKAFDLGSK  231 (253)
T ss_dssp             HHHHTTCG--GGTTEEEEEEEC
T ss_pred             HHHHHcCc--cccCCEEEecCC
Confidence            99999643  257899999986

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.92  E-value=1.6e-23  Score=178.80  Aligned_cols=211  Identities=14%  Similarity=0.129  Sum_probs=153.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      .++|||||+|+||++++++|+++|++|+++.|+..+... +    ...++.++.+|++|.+++.++++       ++|+|
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-l----~~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   81 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-L----AYLEPECRVAEMLDHAGLERALR-------GLDGV   81 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGG-G----GGGCCEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhh-h----ccCCeEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            489999999999999999999999999999887654321 1    11257889999999988887765       69999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC-------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-------------  162 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~-------------  162 (264)
                      ||+|+...        ...+++++.+++|+.++.++++++.+.    + .+++|++||.....+.+.             
T Consensus        82 ih~a~~~~--------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~-~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~  148 (342)
T 2x4g_A           82 IFSAGYYP--------SRPRRWQEEVASALGQTNPFYAACLQA----R-VPRILYVGSAYAMPRHPQGLPGHEGLFYDSL  148 (342)
T ss_dssp             EEC--------------------CHHHHHHHHHHHHHHHHHHH----T-CSCEEEECCGGGSCCCTTSSCBCTTCCCSSC
T ss_pred             EECCccCc--------CCCCCHHHHHHHHHHHHHHHHHHHHHc----C-CCeEEEECCHHhhCcCCCCCCCCCCCCCCcc
Confidence            99999643        123567889999999999999998763    3 479999999887654433             


Q ss_pred             ---CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhc-CCCCC----CCCCCCChHH
Q 041914          163 ---RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF-EPQTP----LEGVVLRAGH  234 (264)
Q Consensus       163 ---~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~ed  234 (264)
                         ...|+.+|.+.+.+++.++.   . |++++.+.||.+.++..... .  ........ ....+    ....++.++|
T Consensus       149 ~~~~~~Y~~sK~~~e~~~~~~~~---~-g~~~~ilrp~~v~g~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~i~v~D  221 (342)
T 2x4g_A          149 PSGKSSYVLCKWALDEQAREQAR---N-GLPVVIGIPGMVLGELDIGP-T--TGRVITAIGNGEMTHYVAGQRNVIDAAE  221 (342)
T ss_dssp             CTTSCHHHHHHHHHHHHHHHHHH---T-TCCEEEEEECEEECSCCSSC-S--TTHHHHHHHTTCCCEEECCEEEEEEHHH
T ss_pred             ccccChHHHHHHHHHHHHHHHhh---c-CCcEEEEeCCceECCCCccc-c--HHHHHHHHHcCCCccccCCCcceeeHHH
Confidence               67899999999999999876   3 89999999999998865110 1  11222221 11111    1123779999


Q ss_pred             HHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          235 VADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       235 va~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +|+++++++.....   |+.+++++|.
T Consensus       222 va~~~~~~~~~~~~---g~~~~v~~~~  245 (342)
T 2x4g_A          222 AGRGLLMALERGRI---GERYLLTGHN  245 (342)
T ss_dssp             HHHHHHHHHHHSCT---TCEEEECCEE
T ss_pred             HHHHHHHHHhCCCC---CceEEEcCCc
Confidence            99999999865432   8999999986

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.92  E-value=3.6e-23  Score=164.05  Aligned_cols=198  Identities=18%  Similarity=0.138  Sum_probs=148.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +++++||||+|+||++++++|+++|++|+++.|+.++...     ....++.++.+|++|.+++.++++       ++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~D~~~~~~~~~~~~-------~~d~   70 (206)
T 1hdo_A            3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----EGPRPAHVVVGDVLQAADVDKTVA-------GQDA   70 (206)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----SSCCCSEEEESCTTSHHHHHHHHT-------TCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-----ccCCceEEEEecCCCHHHHHHHHc-------CCCE
Confidence            3789999999999999999999999999999987654321     112367899999999998888775       6899


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC----CCchhhchH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK----RRTDYHMSK  170 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~----~~~~y~~sK  170 (264)
                      +||++|.....  .   .        .++|+.++..+++++..    .+ .+++|++||.......+    +...|+.+|
T Consensus        71 vi~~a~~~~~~--~---~--------~~~n~~~~~~~~~~~~~----~~-~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K  132 (206)
T 1hdo_A           71 VIVLLGTRNDL--S---P--------TTVMSEGARNIVAAMKA----HG-VDKVVACTSAFLLWDPTKVPPRLQAVTDDH  132 (206)
T ss_dssp             EEECCCCTTCC--S---C--------CCHHHHHHHHHHHHHHH----HT-CCEEEEECCGGGTSCTTCSCGGGHHHHHHH
T ss_pred             EEECccCCCCC--C---c--------cchHHHHHHHHHHHHHH----hC-CCeEEEEeeeeeccCcccccccchhHHHHH
Confidence            99999975431  1   1        13778887777777643    33 56999999997765444    567899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcc-cCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGL-ATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v-~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      .+++.+++.       .+++++.+.||.+ .++......        ..+ ...|. +.+++++|+|+++++++.+.  .
T Consensus       133 ~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~--------~~~-~~~~~-~~~i~~~Dva~~~~~~~~~~--~  193 (206)
T 1hdo_A          133 IRMHKVLRE-------SGLKYVAVMPPHIGDQPLTGAYT--------VTL-DGRGP-SRVISKHDLGHFMLRCLTTD--E  193 (206)
T ss_dssp             HHHHHHHHH-------TCSEEEEECCSEEECCCCCSCCE--------EES-SSCSS-CSEEEHHHHHHHHHHTTSCS--T
T ss_pred             HHHHHHHHh-------CCCCEEEEeCCcccCCCCCcceE--------ecc-cCCCC-CCccCHHHHHHHHHHHhcCc--c
Confidence            999988742       5899999999998 343221110        001 12222 57889999999999999653  4


Q ss_pred             eeccEEEecCee
Q 041914          250 VTGHDLVVDGGF  261 (264)
Q Consensus       250 ~~G~~i~~dgG~  261 (264)
                      .+|+.+.++||+
T Consensus       194 ~~g~~~~i~~g~  205 (206)
T 1hdo_A          194 YDGHSTYPSHQY  205 (206)
T ss_dssp             TTTCEEEEECCC
T ss_pred             ccccceeeeccc
Confidence            789999999986

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.91  E-value=7e-24  Score=181.85  Aligned_cols=230  Identities=11%  Similarity=0.022  Sum_probs=168.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC------CcEEEEEecCCCHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV------GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      +.+.++++|||||+|+||++++++|.++|++|+++.|........+......      .++.++.+|++|.+++.++++ 
T Consensus        21 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-   99 (351)
T 3ruf_A           21 LIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-   99 (351)
T ss_dssp             HHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-
T ss_pred             CCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-
Confidence            3467899999999999999999999999999999998765433333222211      468999999999998888776 


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC----
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG----  160 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~----  160 (264)
                            ++|+|||+|+.....      .+.+++.+.+++|+.++.++++++..    .+ .+++|++||.......    
T Consensus       100 ------~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~v~~SS~~vyg~~~~~~  162 (351)
T 3ruf_A          100 ------GVDHVLHQAALGSVP------RSIVDPITTNATNITGFLNILHAAKN----AQ-VQSFTYAASSSTYGDHPALP  162 (351)
T ss_dssp             ------TCSEEEECCCCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGTTCCCSS
T ss_pred             ------CCCEEEECCccCCcc------hhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEecHHhcCCCCCCC
Confidence                  799999999965321      24456788999999999999988743    33 4699999998765332    


Q ss_pred             -------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhcCCCC--------
Q 041914          161 -------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEPQT--------  223 (264)
Q Consensus       161 -------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~--------  223 (264)
                             .+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++.......  .....+........        
T Consensus       163 ~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  239 (351)
T 3ruf_A          163 KVEENIGNPLSPYAVTKYVNEIYAQVYARTY---GFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDG  239 (351)
T ss_dssp             BCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSS
T ss_pred             CccCCCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCC
Confidence                   335789999999999999998875   7999999999998875432110  01112211111111        


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .....++.++|+|++++.++.. .....|+.|++.+|..
T Consensus       240 ~~~~~~i~v~Dva~a~~~~~~~-~~~~~~~~~ni~~~~~  277 (351)
T 3ruf_A          240 ETSRDFCYIDNVIQMNILSALA-KDSAKDNIYNVAVGDR  277 (351)
T ss_dssp             CCEECCEEHHHHHHHHHHHHTC-CGGGCSEEEEESCSCC
T ss_pred             CeEEeeEEHHHHHHHHHHHHhh-ccccCCCEEEeCCCCc
Confidence            1113577899999999998854 2356789999988754

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.91  E-value=2.3e-24  Score=182.73  Aligned_cols=223  Identities=10%  Similarity=0.006  Sum_probs=166.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHH-HcCCcEEEEecCchhhH-----------HHHHhhh--CCCcEEEEEecCCCHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFA-DHGARMIVIADIQDELG-----------RQVATSI--GVGKCHYVHCDVTNEC   76 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~-~~g~~v~~~~~~~~~~~-----------~~~~~~~--~~~~~~~~~~D~s~~~   76 (264)
                      ..+.+|++||||||+|||++.+..|+ +.|+.++++++..++..           ..+.+..  .......+.||+++++
T Consensus        46 ~~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e  125 (401)
T 4ggo_A           46 GAKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDE  125 (401)
T ss_dssp             TSCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHH
T ss_pred             ccCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHH
Confidence            34678999999999999999999999 68999888887554221           1222222  2357899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCC-----------C---------------------CccCCCHHHH---HHHH
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSD-----------Q---------------------TVLDLDFSAF---DRLF  121 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~-----------~---------------------~~~~~~~~~~---~~~~  121 (264)
                      +++++++++++.+|+||+||||++.....+           +                     .+...+.+++   ...+
T Consensus       126 ~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vM  205 (401)
T 4ggo_A          126 IKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVM  205 (401)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHH
Confidence            999999999999999999999999753210           0                     1122345544   4556


Q ss_pred             hhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC--CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcc
Q 041914          122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK--RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGL  199 (264)
Q Consensus       122 ~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~--~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v  199 (264)
                      ....++.+...+...+.|.+   .++++..|++.+....|  .+..++++|++|+..++.|+.+++  ++++|++.||.+
T Consensus       206 g~s~~s~w~~al~~a~lla~---G~siva~SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~  280 (401)
T 4ggo_A          206 GGEDWERWIKQLSKEGLLEE---GCITLAYSYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGL  280 (401)
T ss_dssp             SSHHHHHHHHHHHHTTCEEE---EEEEEEEECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCC
T ss_pred             hhhHHHHHHHHHHhhhcccC---CceEEEEeccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCcc
Confidence            66777788888887777765   57999999998876555  445899999999999999999997  489999999999


Q ss_pred             cCcccccccCCCh--HHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          200 ATPLTCHAYGMPA--DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       200 ~t~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      .|+.......++.  ......+       ++..+.|.+.+.+..|..+
T Consensus       281 vT~AssaIP~~ply~~~l~kvm-------k~~g~heg~ieq~~rl~~~  321 (401)
T 4ggo_A          281 VTRASAVIPVIPLYLASLFKVM-------KEKGNHEGCIEQITRLYAE  321 (401)
T ss_dssp             CCTTGGGSSSHHHHHHHHHHHH-------HHHTCCCCHHHHHHHHHHH
T ss_pred             ccchhhcCCCchHHHHHHHHHH-------HhcCCCCchHHHHHHHHHH
Confidence            9998766543321  1111122       3344667888998888853

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.91  E-value=3.7e-24  Score=180.66  Aligned_cols=217  Identities=14%  Similarity=0.074  Sum_probs=157.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||++++++|+++|++|+++.|........    .. ..+.++.+|++|.+++.+++++.     ++|++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~----~~-~~~~~~~~Dl~~~~~~~~~~~~~-----~~d~vi   71 (311)
T 2p5y_A            2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKREN----VP-KGVPFFRVDLRDKEGVERAFREF-----RPTHVS   71 (311)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGG----SC-TTCCEECCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhh----cc-cCeEEEECCCCCHHHHHHHHHhc-----CCCEEE
Confidence            689999999999999999999999988887744322111    11 24668899999999998887642     689999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC-CCCC------------CCCCC
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV-AGSC------------GGKRR  163 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~-~~~~------------~~~~~  163 (264)
                      |+|+.....      .+.+++++.+++|+.+++++++++.    +.+ .+++|++||. ....            +..+.
T Consensus        72 ~~a~~~~~~------~~~~~~~~~~~~N~~g~~~l~~a~~----~~~-~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~  140 (311)
T 2p5y_A           72 HQAAQASVK------VSVEDPVLDFEVNLLGGLNLLEACR----QYG-VEKLVFASTGGAIYGEVPEGERAEETWPPRPK  140 (311)
T ss_dssp             ECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHH----HTT-CSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCC
T ss_pred             ECccccCch------hhhhCHHHHHHHHHHHHHHHHHHHH----HhC-CCEEEEeCCChhhcCCCCCCCCcCCCCCCCCC
Confidence            999864321      2456788899999999999999875    333 4699999997 2110            12356


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-ChHHHHhhc-C------------CCCCCCCCC
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-PADEVEKLF-E------------PQTPLEGVV  229 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~-~------------~~~~~~~~~  229 (264)
                      ..|+.+|++.+.+++.++.++   |++++.+.|+.+.++........ ....+.... .            ........+
T Consensus       141 ~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  217 (311)
T 2p5y_A          141 SPYAASKAAFEHYLSVYGQSY---GLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDY  217 (311)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECE
T ss_pred             ChHHHHHHHHHHHHHHHHHHc---CCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEee
Confidence            789999999999999998875   79999999999998864321100 011111111 0            010111457


Q ss_pred             CChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +.++|+|+++++++...     |+.|++++|..
T Consensus       218 i~v~Dva~a~~~~~~~~-----~~~~~i~~~~~  245 (311)
T 2p5y_A          218 VYVGDVAEAHALALFSL-----EGIYNVGTGEG  245 (311)
T ss_dssp             EEHHHHHHHHHHHHHHC-----CEEEEESCSCC
T ss_pred             EEHHHHHHHHHHHHhCC-----CCEEEeCCCCC
Confidence            78999999999998642     78999998854

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.91  E-value=1.2e-23  Score=181.26  Aligned_cols=225  Identities=15%  Similarity=0.090  Sum_probs=155.8

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHH--cCCcEEEEecCchhhHHH--H----H--hhhCCCcEEEEEecCCCHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFAD--HGARMIVIADIQDELGRQ--V----A--TSIGVGKCHYVHCDVTNECQV   78 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~--~g~~v~~~~~~~~~~~~~--~----~--~~~~~~~~~~~~~D~s~~~~~   78 (264)
                      +++++.++++|||||+|+||++++++|++  .|++|+++.|...+....  .    .  .......+.++.+|++|.+++
T Consensus         4 ~~~~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~   83 (362)
T 3sxp_A            4 IDDELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDL   83 (362)
T ss_dssp             SSCCCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHH
T ss_pred             cchhcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHH
Confidence            34568899999999999999999999999  999999998865421100  0    0  011123568999999999988


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 041914           79 KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC  158 (264)
Q Consensus        79 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~  158 (264)
                      .++      ...++|+||||||....        +.+++++.+++|+.++.++++++.    +.+  .+||++||.....
T Consensus        84 ~~~------~~~~~D~vih~A~~~~~--------~~~~~~~~~~~Nv~gt~~ll~aa~----~~~--~~~V~~SS~~vyg  143 (362)
T 3sxp_A           84 RRL------EKLHFDYLFHQAAVSDT--------TMLNQELVMKTNYQAFLNLLEIAR----SKK--AKVIYASSAGVYG  143 (362)
T ss_dssp             HHH------TTSCCSEEEECCCCCGG--------GCCCHHHHHHHHTHHHHHHHHHHH----HTT--CEEEEEEEGGGGC
T ss_pred             HHh------hccCCCEEEECCccCCc--------cccCHHHHHHHHHHHHHHHHHHHH----HcC--CcEEEeCcHHHhC
Confidence            876      23589999999996432        224678999999999999999883    333  4599999965432


Q ss_pred             C----------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHhhcCCCCC--
Q 041914          159 G----------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEKLFEPQTP--  224 (264)
Q Consensus       159 ~----------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~~--  224 (264)
                      .          ..+...|+.+|.+.+.+++.++.+     +.+..+.|+.+..|......  ......+........+  
T Consensus       144 ~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~-----~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~  218 (362)
T 3sxp_A          144 NTKAPNVVGKNESPENVYGFSKLCMDEFVLSHSND-----NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVK  218 (362)
T ss_dssp             SCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTTTT-----SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEE
T ss_pred             CCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhcc-----CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeE
Confidence            2          234566999999999999888766     66777777777665432110  0011122221111111  


Q ss_pred             ------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 ------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 ------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                            ....++.++|+|+++++++.+.   .+| .|++++|..
T Consensus       219 ~~~~g~~~~~~i~v~Dva~ai~~~~~~~---~~g-~~~i~~~~~  258 (362)
T 3sxp_A          219 LFEFGEQLRDFVYIEDVIQANVKAMKAQ---KSG-VYNVGYSQA  258 (362)
T ss_dssp             CSGGGCCEEECEEHHHHHHHHHHHTTCS---SCE-EEEESCSCE
T ss_pred             EECCCCeEEccEEHHHHHHHHHHHHhcC---CCC-EEEeCCCCC
Confidence                  1134778999999999999754   368 999988754

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.91  E-value=1.7e-23  Score=181.28  Aligned_cols=224  Identities=14%  Similarity=0.059  Sum_probs=161.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+++++++|||||+|+||++++++|+++| ++|+++.|......+.+.   ....+.++.+|++|.+++.++++      
T Consensus        28 ~~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~---~~~~v~~~~~Dl~d~~~l~~~~~------   98 (377)
T 2q1s_A           28 SKLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVP---DHPAVRFSETSITDDALLASLQD------   98 (377)
T ss_dssp             GGGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSC---CCTTEEEECSCTTCHHHHHHCCS------
T ss_pred             HHhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhcc---CCCceEEEECCCCCHHHHHHHhh------
Confidence            45788999999999999999999999999 999888887554321111   12468899999999988776654      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-CCCcEEEEecCCCCCC----------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-GVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-~~~~~iv~iss~~~~~----------  158 (264)
                       ++|+|||+|+.....      .+.+++++.+++|+.++.++++++.    +. + .+++|++||...+.          
T Consensus        99 -~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~----~~~~-~~~~V~~SS~~vyg~~~~~~~~~~  166 (377)
T 2q1s_A           99 -EYDYVFHLATYHGNQ------SSIHDPLADHENNTLTTLKLYERLK----HFKR-LKKVVYSAAGCSIAEKTFDDAKAT  166 (377)
T ss_dssp             -CCSEEEECCCCSCHH------HHHHCHHHHHHHHTHHHHHHHHHHT----TCSS-CCEEEEEEEC--------------
T ss_pred             -CCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHH----HhCC-CCeEEEeCCHHHcCCCCCCCcCcc
Confidence             799999999965321      2345678899999999999998873    33 3 46999999976421          


Q ss_pred             ------CC-CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccc---------cccc--CCChHHHHhhcC
Q 041914          159 ------GG-KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLT---------CHAY--GMPADEVEKLFE  220 (264)
Q Consensus       159 ------~~-~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~---------~~~~--~~~~~~~~~~~~  220 (264)
                            +. .+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++..         ....  ......+.....
T Consensus       167 E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  243 (377)
T 2q1s_A          167 EETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH---QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKAL  243 (377)
T ss_dssp             CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHH
T ss_pred             cccccccccCCCCchHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHH
Confidence                  22 456789999999999999998875   89999999999998754         1100  011122222221


Q ss_pred             CCCC--------CCCCCCChHHHHHH-HHHHhCCCCCCeeccEEEecCeee
Q 041914          221 PQTP--------LEGVVLRAGHVADA-VLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       221 ~~~~--------~~~~~~~~edva~~-~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ...+        ....++.++|+|++ ++.++....   +| .|++++|..
T Consensus       244 ~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~~---~g-~~~i~~~~~  290 (377)
T 2q1s_A          244 KGMPLPLENGGVATRDFIFVEDVANGLIACAADGTP---GG-VYNIASGKE  290 (377)
T ss_dssp             TTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCCT---TE-EEECCCCCC
T ss_pred             cCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcCC---CC-eEEecCCCc
Confidence            1111        11246779999999 999886532   78 999998753

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.91  E-value=1.4e-23  Score=178.94  Aligned_cols=220  Identities=15%  Similarity=0.119  Sum_probs=160.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc---C---CcEEEEecCchh-hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADH---G---ARMIVIADIQDE-LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~---g---~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++|||||+|+||++++++|+++   |   ++|+++.|.... ..+.+.......++.++.+|++|.+++.+++       
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-------   74 (337)
T 1r6d_A            2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLAREL-------   74 (337)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHT-------
T ss_pred             eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHh-------
Confidence            6899999999999999999997   8   898888875421 1111111112246889999999998887776       


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------  158 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------  158 (264)
                      .++|+|||+|+.....      .+.+++++.+++|+.++.++++++.+.    + .++||++||.....           
T Consensus        75 ~~~d~Vih~A~~~~~~------~~~~~~~~~~~~Nv~~~~~l~~a~~~~----~-~~~~v~~SS~~vyg~~~~~~~~E~~  143 (337)
T 1r6d_A           75 RGVDAIVHFAAESHVD------RSIAGASVFTETNVQGTQTLLQCAVDA----G-VGRVVHVSTNQVYGSIDSGSWTESS  143 (337)
T ss_dssp             TTCCEEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHHHT----T-CCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             cCCCEEEECCCccCch------hhhhCHHHHHHHHHHHHHHHHHHHHHc----C-CCEEEEecchHHhCCCCCCCCCCCC
Confidence            3899999999965321      234567789999999999999998663    3 46999999975432           


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC--------CCCCCC
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP--------LEGVVL  230 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  230 (264)
                      +..+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....  ..............+        ....++
T Consensus       144 ~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~~~ilrp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  218 (337)
T 1r6d_A          144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHPE--KLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (337)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCTT--SHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHH---CCCEEEEEeeeeECCCCCCC--ChHHHHHHHHhcCCCcEEeCCCCeeEeeE
Confidence            33467789999999999999998875   79999999999988864210  011112111111111        113577


Q ss_pred             ChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .++|+|++++.++...   .+|+.+++++|..
T Consensus       219 ~v~Dva~a~~~~~~~~---~~g~~~~v~~~~~  247 (337)
T 1r6d_A          219 HTDDHCRGIALVLAGG---RAGEIYHIGGGLE  247 (337)
T ss_dssp             EHHHHHHHHHHHHHHC---CTTCEEEECCCCE
T ss_pred             eHHHHHHHHHHHHhCC---CCCCEEEeCCCCC
Confidence            8999999999998643   3789999999864

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.91  E-value=3.9e-23  Score=176.13  Aligned_cols=216  Identities=16%  Similarity=0.119  Sum_probs=152.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ...++++++|||||+|+||++++++|+++|++|+++.|+.....+.+.+   ..++.++.+|++|.+++.++++..    
T Consensus        16 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~---~~~~~~~~~Dl~d~~~~~~~~~~~----   88 (333)
T 2q1w_A           16 PRGSHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKD---HPNLTFVEGSIADHALVNQLIGDL----   88 (333)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCC---CTTEEEEECCTTCHHHHHHHHHHH----
T ss_pred             eecCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhh---cCCceEEEEeCCCHHHHHHHHhcc----
Confidence            4457889999999999999999999999999999998875432211111   136788999999999998888752    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----CC-----
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----GG-----  160 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----~~-----  160 (264)
                       ++|+||||||.....       +.++++  +++|+.++.++++++.+    .+ .++||++||.....    ..     
T Consensus        89 -~~D~vih~A~~~~~~-------~~~~~~--~~~N~~~~~~l~~a~~~----~~-~~~iV~~SS~~~~g~~~~~~~~~~~  153 (333)
T 2q1w_A           89 -QPDAVVHTAASYKDP-------DDWYND--TLTNCVGGSNVVQAAKK----NN-VGRFVYFQTALCYGVKPIQQPVRLD  153 (333)
T ss_dssp             -CCSEEEECCCCCSCT-------TCHHHH--HHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGGCSCCCSSSBCTT
T ss_pred             -CCcEEEECceecCCC-------ccCChH--HHHHHHHHHHHHHHHHH----hC-CCEEEEECcHHHhCCCcccCCCCcC
Confidence             699999999975431       223455  99999999999999865    23 57999999987653    21     


Q ss_pred             ---CCC-chhhchHHHHHHHHHH-HHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhc-CC-----CCCCCCCC
Q 041914          161 ---KRR-TDYHMSKHAVIGLVRS-ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF-EP-----QTPLEGVV  229 (264)
Q Consensus       161 ---~~~-~~y~~sK~al~~~~~~-la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~  229 (264)
                         .+. ..|+.+|++.+.+++. ++        .+..+.|+.+..+...   ......+.... ..     ..+. ..+
T Consensus       154 E~~~p~~~~Y~~sK~~~E~~~~~s~~--------~~~ilR~~~v~gp~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~  221 (333)
T 2q1w_A          154 HPRNPANSSYAISKSANEDYLEYSGL--------DFVTFRLANVVGPRNV---SGPLPIFFQRLSEGKKCFVTKAR-RDF  221 (333)
T ss_dssp             SCCCCTTCHHHHHHHHHHHHHHHHTC--------CEEEEEESEEESTTCC---SSHHHHHHHHHHTTCCCEEEECE-ECE
T ss_pred             CCCCCCCCchHHHHHHHHHHHHhhhC--------CeEEEeeceEECcCCc---CcHHHHHHHHHHcCCeeeCCCce-Eee
Confidence               234 7899999999999987 54        4566777766665410   00011111111 11     1112 457


Q ss_pred             CChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          230 LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       230 ~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +.++|+|+++++++....    |+.|++++|..+
T Consensus       222 i~v~Dva~ai~~~~~~~~----g~~~~v~~~~~~  251 (333)
T 2q1w_A          222 VFVKDLARATVRAVDGVG----HGAYHFSSGTDV  251 (333)
T ss_dssp             EEHHHHHHHHHHHHTTCC----CEEEECSCSCCE
T ss_pred             EEHHHHHHHHHHHHhcCC----CCEEEeCCCCCc
Confidence            899999999999997543    899999988643

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.91  E-value=2.5e-23  Score=178.10  Aligned_cols=220  Identities=13%  Similarity=0.070  Sum_probs=156.9

Q ss_pred             ccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914            7 CNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus         7 ~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .+.+.++++|++|||||+|+||.+++++|+++|++|+++.|....           ..+.++.+|++|.+++.++++   
T Consensus        11 ~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----------~~~~~~~~Dl~d~~~~~~~~~---   76 (347)
T 4id9_A           11 SSGLVPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----------TGGEEVVGSLEDGQALSDAIM---   76 (347)
T ss_dssp             ----------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----------SCCSEEESCTTCHHHHHHHHT---
T ss_pred             CCcccccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----------CCccEEecCcCCHHHHHHHHh---
Confidence            344667889999999999999999999999999999999887654           256789999999999888776   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------  158 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------  158 (264)
                          ++|+|||+|+.....        .+.+++.+++|+.++.++++++..    .+ .++||++||.....        
T Consensus        77 ----~~d~vih~A~~~~~~--------~~~~~~~~~~nv~~~~~ll~a~~~----~~-~~~~V~~SS~~vyg~~~~~~~~  139 (347)
T 4id9_A           77 ----GVSAVLHLGAFMSWA--------PADRDRMFAVNVEGTRRLLDAASA----AG-VRRFVFASSGEVYPENRPEFLP  139 (347)
T ss_dssp             ----TCSEEEECCCCCCSS--------GGGHHHHHHHHTHHHHHHHHHHHH----TT-CSEEEEEEEGGGTTTTSCSSSS
T ss_pred             ----CCCEEEECCcccCcc--------hhhHHHHHHHHHHHHHHHHHHHHH----cC-CCeEEEECCHHHhCCCCCCCCC
Confidence                799999999975432        234589999999999999998743    34 56999999965432        


Q ss_pred             -----CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCccc-------------Ccccccc---------cCCC
Q 041914          159 -----GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLA-------------TPLTCHA---------YGMP  211 (264)
Q Consensus       159 -----~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~-------------t~~~~~~---------~~~~  211 (264)
                           +..+...|+.+|.+.+.+++.++.+.   +++++.+.|+.+.             ++.....         ....
T Consensus       140 ~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~  216 (347)
T 4id9_A          140 VTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---AMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAA  216 (347)
T ss_dssp             BCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---SSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHH
T ss_pred             cCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---CCceEEEccceEeecccccccccccCCCCcccccccccccccchhH
Confidence                 33567889999999999999998873   8999999999988             3321100         0000


Q ss_pred             hHHHHhhcCCCCC--------CCCCC----CChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          212 ADEVEKLFEPQTP--------LEGVV----LRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       212 ~~~~~~~~~~~~~--------~~~~~----~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ...+........+        ....+    +.++|+|++++.++....  ..|+.|++.+|..
T Consensus       217 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~--~~~~~~ni~~~~~  277 (347)
T 4id9_A          217 IAELLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPE--AAGGTFNLGADEP  277 (347)
T ss_dssp             HHHHHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG--GTTEEEEESCSSC
T ss_pred             HHHHHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc--cCCCeEEECCCCc
Confidence            1112222222111        11335    889999999999996542  4588999988754

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.90  E-value=1.3e-23  Score=177.47  Aligned_cols=214  Identities=16%  Similarity=0.131  Sum_probs=156.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||+|+||++++++|+++| .++++.++.....+..     ...+.++.+|+++ +++.++++       ++|++
T Consensus         2 ~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~-----~~~~~~~~~Dl~~-~~~~~~~~-------~~d~v   67 (313)
T 3ehe_A            2 SLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFV-----NEAARLVKADLAA-DDIKDYLK-------GAEEV   67 (313)
T ss_dssp             -CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGS-----CTTEEEECCCTTT-SCCHHHHT-------TCSEE
T ss_pred             CEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhc-----CCCcEEEECcCCh-HHHHHHhc-------CCCEE
Confidence            579999999999999999999999 5566665544322111     2368899999999 88777765       79999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------CCCCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------CGGKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------~~~~~~~  164 (264)
                      ||+|+....      +.+.+++++.+++|+.++.++++++.    +.+ .+++|++||....           .+..+..
T Consensus        68 ih~a~~~~~------~~~~~~~~~~~~~nv~~~~~l~~~~~----~~~-~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~  136 (313)
T 3ehe_A           68 WHIAANPDV------RIGAENPDEIYRNNVLATYRLLEAMR----KAG-VSRIVFTSTSTVYGEAKVIPTPEDYPTHPIS  136 (313)
T ss_dssp             EECCCCCCC------C-CCCCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             EECCCCCCh------hhhhhCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEeCchHHhCcCCCCCCCCCCCCCCCC
Confidence            999986432      23445688999999999999998854    334 5799999997764           2445678


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCC--------CCCCCCCCCChHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEP--------QTPLEGVVLRAGHVA  236 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~edva  236 (264)
                      .|+.+|.+.+.+++.++.++   |++++.+.|+.+.++.....  ............        .......++.++|+|
T Consensus       137 ~Y~~sK~~~e~~~~~~~~~~---g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  211 (313)
T 3ehe_A          137 LYGASKLACEALIESYCHTF---DMQAWIYRFANVIGRRSTHG--VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCV  211 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHT---TCEEEEEECSCEESTTCCCS--HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhc---CCCEEEEeeccccCcCCCcC--hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHH
Confidence            89999999999999999885   89999999999988753210  001111111111        111114578999999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++++.++.   ....|+.+++.+|..
T Consensus       212 ~a~~~~~~---~~~~~~~~ni~~~~~  234 (313)
T 3ehe_A          212 DAMLFGLR---GDERVNIFNIGSEDQ  234 (313)
T ss_dssp             HHHHHHTT---CCSSEEEEECCCSCC
T ss_pred             HHHHHHhc---cCCCCceEEECCCCC
Confidence            99999986   335688999998754

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.90  E-value=2.3e-23  Score=183.43  Aligned_cols=224  Identities=13%  Similarity=0.055  Sum_probs=158.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh--HHHHHhhh-----------CCCcEEEEEecCCCHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSI-----------GVGKCHYVHCDVTNEC   76 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~--~~~~~~~~-----------~~~~~~~~~~D~s~~~   76 (264)
                      +....++++|||||+|+||++++++|++.|++|+++.|+....  .+.+.+.+           ...++.++.+|++|.+
T Consensus        64 ~~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~  143 (427)
T 4f6c_A           64 LSHRPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD  143 (427)
T ss_dssp             SCCCCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C
T ss_pred             CCCCCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc
Confidence            3445678999999999999999999999999999999887622  11111111           1247899999999987


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ++.        .++++|+|||||+....         .+++++.+++|+.++.++++++.+     + ..++|++||...
T Consensus       144 ~l~--------~~~~~d~Vih~A~~~~~---------~~~~~~~~~~Nv~g~~~l~~aa~~-----~-~~~~v~~SS~~~  200 (427)
T 4f6c_A          144 DVV--------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISV  200 (427)
T ss_dssp             CCC--------CSSCCSEEEECCCCC----------------CHHHHHHHHHHHHHHHHHH-----T-TCEEEEEEEGGG
T ss_pred             cCC--------CcCCCCEEEECCcccCC---------CCCHHHHHHHHHHHHHHHHHHHHh-----c-CCcEEEECchHh
Confidence            777        45689999999997632         246788999999999999999876     2 469999999887


Q ss_pred             ------------------CCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hH
Q 041914          157 ------------------SCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----AD  213 (264)
Q Consensus       157 ------------------~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~  213 (264)
                                        ..+..+...|+.+|++.+.+++.++.    .|++++++.||.+.++.........     ..
T Consensus       201 G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~  276 (427)
T 4f6c_A          201 GTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFS  276 (427)
T ss_dssp             GSEECSSCSCCEECTTCSCSSCCCCSHHHHHHHHHHHHHHHHHH----TTCCEEEEEECCEESCSSSCCCCTTGGGCHHH
T ss_pred             CCCccCCCCCccccccccccCCCCCCchHHHHHHHHHHHHHHHH----cCCCEEEEeCCeeecCCCCCccccCcchHHHH
Confidence                              01123678899999999999998753    5899999999999988654321111     11


Q ss_pred             HHHhhcCCC--CC-----CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          214 EVEKLFEPQ--TP-----LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       214 ~~~~~~~~~--~~-----~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .........  .|     ....++.++|+|++++.++....   .|++|++++|..+
T Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~v~v~DvA~ai~~~~~~~~---~g~~~~l~~~~~~  330 (427)
T 4f6c_A          277 MVMNDLLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  330 (427)
T ss_dssp             HHHHHHHHSSEEEHHHHTCEECCEEHHHHHHHHHHHTTSCC---CCSEEEESCSCCE
T ss_pred             HHHHHHHhcCCCCCccccceEEEeeHHHHHHHHHHHHcCCC---CCCEEEecCCCCC
Confidence            111111111  11     11347889999999999986543   8999999987543

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.90  E-value=2.5e-23  Score=177.48  Aligned_cols=222  Identities=12%  Similarity=0.120  Sum_probs=152.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH--HHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++|++|||||+|+||++++++|+++|++|+++.|+.....+  .+.+ ...  .++.++.+|++|.+++.++++     
T Consensus         3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~-----   76 (337)
T 2c29_D            3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLD-LPKAETHLTLWKADLADEGSFDEAIK-----   76 (337)
T ss_dssp             ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHT-STTHHHHEEEEECCTTSTTTTHHHHT-----
T ss_pred             CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHh-cccCCCeEEEEEcCCCCHHHHHHHHc-----
Confidence            367999999999999999999999999998888887553211  1111 111  257889999999988887765     


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC--------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG--------  160 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~--------  160 (264)
                        ++|+|||+|+....     ...  +..++.+++|+.++.++++++.+..   . .++||++||..+..+.        
T Consensus        77 --~~d~Vih~A~~~~~-----~~~--~~~~~~~~~nv~gt~~ll~a~~~~~---~-~~riV~~SS~~~~~~~~~~~~~~~  143 (337)
T 2c29_D           77 --GCTGVFHVATPMDF-----ESK--DPENEVIKPTIEGMLGIMKSCAAAK---T-VRRLVFTSSAGTVNIQEHQLPVYD  143 (337)
T ss_dssp             --TCSEEEECCCCCCS-----SCS--SHHHHTHHHHHHHHHHHHHHHHHHS---C-CCEEEEECCGGGTSCSSSCCSEEC
T ss_pred             --CCCEEEEeccccCC-----CCC--ChHHHHHHHHHHHHHHHHHHHHhCC---C-ccEEEEeeeHhhcccCCCCCcccC
Confidence              68999999985421     111  2345789999999999999987642   1 4699999998743221        


Q ss_pred             --------------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh---cCCC-
Q 041914          161 --------------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL---FEPQ-  222 (264)
Q Consensus       161 --------------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~---~~~~-  222 (264)
                                    ++...|+.||.+.+.+++.++.+   .|+++++++|+.+.++......  .. .....   .... 
T Consensus       144 E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~--~~-~~~~~~~~~~g~~  217 (337)
T 2c29_D          144 ESCWSDMEFCRAKKMTAWMYFVSKTLAEQAAWKYAKE---NNIDFITIIPTLVVGPFIMSSM--PP-SLITALSPITGNE  217 (337)
T ss_dssp             TTCCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---HTCCEEEEEECEEESCCSCSSC--CH-HHHHHTHHHHTCG
T ss_pred             cccCCchhhhcccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCC--Cc-hHHHHHHHHcCCC
Confidence                          12346999999999998877755   3899999999999998643221  11 11100   0000 


Q ss_pred             -----CCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          223 -----TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       223 -----~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                           .+. .+++.++|+|+++++++..  ....|.++..+++.+
T Consensus       218 ~~~~~~~~-~~~i~v~Dva~a~~~~~~~--~~~~~~~~~~~~~~s  259 (337)
T 2c29_D          218 AHYSIIRQ-GQFVHLDDLCNAHIYLFEN--PKAEGRYICSSHDCI  259 (337)
T ss_dssp             GGHHHHTE-EEEEEHHHHHHHHHHHHHC--TTCCEEEEECCEEEE
T ss_pred             ccccccCC-CCEEEHHHHHHHHHHHhcC--cccCceEEEeCCCCC
Confidence                 011 3488999999999999854  234566544444443

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.90  E-value=1.4e-22  Score=175.76  Aligned_cols=221  Identities=14%  Similarity=0.060  Sum_probs=161.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ...+++|||||+|+||++++++|+++|++|+++.|+..+....     ....+.++.+|++|.+++.++++       ++
T Consensus        27 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~v~~~~~Dl~d~~~~~~~~~-------~~   94 (379)
T 2c5a_A           27 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-----DMFCDEFHLVDLRVMENCLKVTE-------GV   94 (379)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-----GGTCSEEEECCTTSHHHHHHHHT-------TC
T ss_pred             ccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-----ccCCceEEECCCCCHHHHHHHhC-------CC
Confidence            3568999999999999999999999999999998876543110     11257889999999998888775       79


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------------
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------------  158 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------------  158 (264)
                      |+|||+|+.....  ..   +.+++++.+++|+.++.++++++..    .+ .++||++||.....              
T Consensus        95 d~Vih~A~~~~~~--~~---~~~~~~~~~~~Nv~g~~~ll~a~~~----~~-~~~~V~~SS~~v~~~~~~~~~~~~~~~E  164 (379)
T 2c5a_A           95 DHVFNLAADMGGM--GF---IQSNHSVIMYNNTMISFNMIEAARI----NG-IKRFFYASSACIYPEFKQLETTNVSLKE  164 (379)
T ss_dssp             SEEEECCCCCCCH--HH---HTTCHHHHHHHHHHHHHHHHHHHHH----TT-CSEEEEEEEGGGSCGGGSSSSSSCEECG
T ss_pred             CEEEECceecCcc--cc---cccCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEEeehheeCCCCCCCccCCCcCc
Confidence            9999999975321  11   1235788999999999999998853    33 46999999976543              


Q ss_pred             ----CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhc-CCC--------C
Q 041914          159 ----GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLF-EPQ--------T  223 (264)
Q Consensus       159 ----~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~-~~~--------~  223 (264)
                          +..+...|+.+|.+.+.+++.++.++   |++++++.||.+.++........  ....+.... ...        .
T Consensus       165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  241 (379)
T 2c5a_A          165 SDAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDG  241 (379)
T ss_dssp             GGGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCS
T ss_pred             ccCCCCCCCChhHHHHHHHHHHHHHHHHHH---CCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCC
Confidence                33456789999999999999998775   79999999999998854321100  111121111 111        0


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .....++.++|+|++++.++...    .|+.+++.+|..
T Consensus       242 ~~~~~~i~v~Dva~ai~~~l~~~----~~~~~ni~~~~~  276 (379)
T 2c5a_A          242 LQTRSFTFIDECVEGVLRLTKSD----FREPVNIGSDEM  276 (379)
T ss_dssp             CCEECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCC
T ss_pred             CeeEEEEEHHHHHHHHHHHhhcc----CCCeEEeCCCCc
Confidence            11145788999999999998643    467899988754

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.90  E-value=8.9e-23  Score=174.69  Aligned_cols=228  Identities=13%  Similarity=0.091  Sum_probs=159.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh---------hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---------LGRQVATSIGVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      +|++|||||+|+||.+++++|+++|++|+++.|....         ..+.+.... ..++.++.+|++|.+++.+++++.
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~D~~~~~~~~~~~~~~   80 (348)
T 1ek6_A            2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELT-GRSVEFEEMDILDQGALQRLFKKY   80 (348)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHH-TCCCEEEECCTTCHHHHHHHHHHC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhcc-CCceEEEECCCCCHHHHHHHHHhc
Confidence            4789999999999999999999999999888875332         222222211 236788999999999988887652


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-------
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-------  158 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-------  158 (264)
                           ++|+|||+||.....      .+.+++++.+++|+.++.++++++.    +.+ .++||++||.....       
T Consensus        81 -----~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~  144 (348)
T 1ek6_A           81 -----SFMAVIHFAGLKAVG------ESVQKPLDYYRVNLTGTIQLLEIMK----AHG-VKNLVFSSSATVYGNPQYLPL  144 (348)
T ss_dssp             -----CEEEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCSCSSSSB
T ss_pred             -----CCCEEEECCCCcCcc------chhhchHHHHHHHHHHHHHHHHHHH----HhC-CCEEEEECcHHHhCCCCCCCc
Confidence                 799999999975321      1345678899999999999988753    334 57999999987642       


Q ss_pred             ----CC-CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--------CChHHHHhhcC-CCC-
Q 041914          159 ----GG-KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--------MPADEVEKLFE-PQT-  223 (264)
Q Consensus       159 ----~~-~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~-~~~-  223 (264)
                          +. |....|+.+|.+.+.+++.++.+  ..++++..+.|+.+..+...-..+        ........... ... 
T Consensus       145 ~E~~~~~p~~~~Y~~sK~~~e~~~~~~~~~--~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~  222 (348)
T 1ek6_A          145 DEAHPTGGCTNPYGKSKFFIEEMIRDLCQA--DKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREA  222 (348)
T ss_dssp             CTTSCCCCCSSHHHHHHHHHHHHHHHHHHH--CTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSC
T ss_pred             CCCCCCCCCCCchHHHHHHHHHHHHHHHhc--CCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCC
Confidence                11 23678999999999999999887  346999999998887663110000        01111122111 110 


Q ss_pred             -------------CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          224 -------------PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       224 -------------~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                                   .....++.++|+|++++.++........++.+++.+|.
T Consensus       223 ~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~  273 (348)
T 1ek6_A          223 LNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGT  273 (348)
T ss_dssp             EEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSC
T ss_pred             eEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCC
Confidence                         01134678999999999988543222234889998764

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.90  E-value=5.7e-24  Score=179.45  Aligned_cols=217  Identities=18%  Similarity=0.099  Sum_probs=159.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|+||++++++|+++|++|+++.|.........     ...+.++.+|++|.+ +.++++       . |+|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~Dl~d~~-~~~~~~-------~-d~v   66 (312)
T 3ko8_A            1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-----NPSAELHVRDLKDYS-WGAGIK-------G-DVV   66 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-----CTTSEEECCCTTSTT-TTTTCC-------C-SEE
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-----CCCceEEECccccHH-HHhhcC-------C-CEE
Confidence            47999999999999999999999999988888765432211     235788999999986 554443       3 999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~  164 (264)
                      ||+|+....      +.+.++++..+++|+.++.++++++..    .+ .+++|++||...+.           +..+..
T Consensus        67 ih~A~~~~~------~~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~  135 (312)
T 3ko8_A           67 FHFAANPEV------RLSTTEPIVHFNENVVATFNVLEWARQ----TG-VRTVVFASSSTVYGDADVIPTPEEEPYKPIS  135 (312)
T ss_dssp             EECCSSCSS------SGGGSCHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTTSCCCCCS
T ss_pred             EECCCCCCc------hhhhhCHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeCcHHHhCCCCCCCCCCCCCCCCCC
Confidence            999996432      234456788999999999999998843    23 56999999977542           334578


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC--------CCCCCCCChHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT--------PLEGVVLRAGHVA  236 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~edva  236 (264)
                      .|+.+|.+.+.+++.++.++   |++++.++||.+.++.....  ..............        .....++.++|+|
T Consensus       136 ~Y~~sK~~~e~~~~~~~~~~---g~~~~~lrp~~v~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva  210 (312)
T 3ko8_A          136 VYGAAKAAGEVMCATYARLF---GVRCLAVRYANVVGPRLRHG--VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAV  210 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCSS--HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccccCcCCCCC--hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHH
Confidence            89999999999999999886   89999999999999864321  00111111111100        0113577899999


Q ss_pred             HHHHHHhCC-CCCCeeccEEEecCeee
Q 041914          237 DAVLFLACR-DSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       237 ~~~~~l~s~-~~~~~~G~~i~~dgG~~  262 (264)
                      ++++.++.. ......|+.+++.+|..
T Consensus       211 ~a~~~~~~~~~~~~~~~~~~ni~~~~~  237 (312)
T 3ko8_A          211 EATLAAWKKFEEMDAPFLALNVGNVDA  237 (312)
T ss_dssp             HHHHHHHHHHHHSCCSEEEEEESCSSC
T ss_pred             HHHHHHHHhccccCCCCcEEEEcCCCc
Confidence            999999864 22346788999988754

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.90  E-value=3.8e-22  Score=174.15  Aligned_cols=231  Identities=13%  Similarity=0.024  Sum_probs=161.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH----------------HHHHhh--hCCCcEEEEEecCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG----------------RQVATS--IGVGKCHYVHCDVT   73 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~----------------~~~~~~--~~~~~~~~~~~D~s   73 (264)
                      ...+.++|||||+|.||++++++|+++|++|+++.|......                +.+.+.  ....++.++.+|++
T Consensus         8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~   87 (404)
T 1i24_A            8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDIC   87 (404)
T ss_dssp             ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTT
T ss_pred             ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCC
Confidence            356899999999999999999999999999888877543211                111111  11236788999999


Q ss_pred             CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           74 NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      |.+++.++++..     ++|+||||||.....   ....+++.+...+++|+.++.++++++.+.    +...+||++||
T Consensus        88 d~~~~~~~~~~~-----~~D~Vih~A~~~~~~---~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~----~~~~~~V~~SS  155 (404)
T 1i24_A           88 DFEFLAESFKSF-----EPDSVVHFGEQRSAP---YSMIDRSRAVYTQHNNVIGTLNVLFAIKEF----GEECHLVKLGT  155 (404)
T ss_dssp             SHHHHHHHHHHH-----CCSEEEECCSCCCHH---HHTSCHHHHHHHHHHHHHHHHHHHHHHHHH----CTTCEEEEECC
T ss_pred             CHHHHHHHHhcc-----CCCEEEECCCCCCcc---chhhCccchhhhHHHHHHHHHHHHHHHHHh----CCCcEEEEeCc
Confidence            999999888765     699999999975421   222366778889999999999999988653    21249999999


Q ss_pred             CCCCC------------------------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc--
Q 041914          154 VAGSC------------------------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA--  207 (264)
Q Consensus       154 ~~~~~------------------------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~--  207 (264)
                      .....                        +..+...|+.+|.+.+.+++.++.++   |+++++++||.+.++.....  
T Consensus       156 ~~vyg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~~~~~~  232 (404)
T 1i24_A          156 MGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKTDETEM  232 (404)
T ss_dssp             GGGGCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCCTTGGG
T ss_pred             HHHhCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCCCcccc
Confidence            86432                        33456789999999999999998876   89999999999998854210  


Q ss_pred             ----------c---CCChHHHHhhc-CCC-------CCCCCCCCChHHHHHHHHHHhCCCCCCeec--cEEEecC
Q 041914          208 ----------Y---GMPADEVEKLF-EPQ-------TPLEGVVLRAGHVADAVLFLACRDSEFVTG--HDLVVDG  259 (264)
Q Consensus       208 ----------~---~~~~~~~~~~~-~~~-------~~~~~~~~~~edva~~~~~l~s~~~~~~~G--~~i~~dg  259 (264)
                                .   ......+.... ...       ......++.++|+|++++.++....  ..|  +.+++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~--~~g~~~~yni~~  305 (404)
T 1i24_A          233 HEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA--KAGEFRVFNQFT  305 (404)
T ss_dssp             SGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC--CTTCEEEEEECS
T ss_pred             ccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc--cCCCceEEEECC
Confidence                      0   00111111111 111       0011346789999999999885432  235  6788865

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.90  E-value=3e-23  Score=175.69  Aligned_cols=222  Identities=15%  Similarity=0.095  Sum_probs=146.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec-Cchh--hHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIAD-IQDE--LGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~-~~~~--~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ||++|||||+|+||++++++|+++|++|+++.| +...  ....+.+... ..++.++.+|++|.+++.++++       
T Consensus         1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------   73 (322)
T 2p4h_X            1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-------   73 (322)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-------
T ss_pred             CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-------
Confidence            589999999999999999999999999888887 4321  1111111100 1257889999999988887775       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC---------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK---------  161 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~---------  161 (264)
                      ++|+|||+|+...     .  ...+.+++.+++|+.+++++++++.+.   .+ .++||++||..+..+.+         
T Consensus        74 ~~d~vih~A~~~~-----~--~~~~~~~~~~~~nv~gt~~l~~aa~~~---~~-~~~iV~~SS~~~~~~~~~~~~~~~e~  142 (322)
T 2p4h_X           74 GCVGIFHTASPID-----F--AVSEPEEIVTKRTVDGALGILKACVNS---KT-VKRFIYTSSGSAVSFNGKDKDVLDES  142 (322)
T ss_dssp             TCSEEEECCCCC---------------CHHHHHHHHHHHHHHHHHTTC---SS-CCEEEEEEEGGGTSCSSSCCSEECTT
T ss_pred             CCCEEEEcCCccc-----C--CCCChHHHHHHHHHHHHHHHHHHHHhc---CC-ccEEEEeccHHHcccCCCCCeecCCc
Confidence            6899999996421     1  111224568999999999999988643   13 47999999987442211         


Q ss_pred             -------------CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC---CCC
Q 041914          162 -------------RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ---TPL  225 (264)
Q Consensus       162 -------------~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~---~~~  225 (264)
                                   ....|+.||.+.+.+++.++.+   .|+++++++||.+.+++...................   .+.
T Consensus       143 ~~~~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~  219 (322)
T 2p4h_X          143 DWSDVDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQ---NGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGV  219 (322)
T ss_dssp             CCCCHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHH---TTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCE
T ss_pred             cccchhhhcccCcccccHHHHHHHHHHHHHHHHHh---cCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcC
Confidence                         1116999999888777666543   589999999999999875321110001110111111   111


Q ss_pred             C-CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          226 E-GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       226 ~-~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      . ..++.++|+|+++++++...  ..+|+ +++.++
T Consensus       220 ~~~~~i~v~Dva~a~~~~~~~~--~~~g~-~~~~~~  252 (322)
T 2p4h_X          220 TRFHMVHVDDVARAHIYLLENS--VPGGR-YNCSPF  252 (322)
T ss_dssp             EEEEEEEHHHHHHHHHHHHHSC--CCCEE-EECCCE
T ss_pred             CCcCEEEHHHHHHHHHHHhhCc--CCCCC-EEEcCC
Confidence            0 14789999999999998542  36787 445543

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.90  E-value=2.3e-23  Score=213.68  Aligned_cols=177  Identities=17%  Similarity=0.178  Sum_probs=136.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhh---HHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDEL---GRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+|++|||||++|||+++|++|+++|++ |++++|+..+.   .+.+.+.. ...++.++.||++|.++++++++++. +
T Consensus      1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~-~ 1961 (2512)
T 2vz8_A         1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEAT-Q 1961 (2512)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHH-H
T ss_pred             CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHH-h
Confidence            6899999999999999999999999998 55566664432   12222221 23478899999999999999999987 4


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||+....  ++.+.+.++|++++++|+.|++++.+.+.+.|.+   .++||++||..+..+.++...|++
T Consensus      1962 ~g~id~lVnnAgv~~~~--~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~---~g~iV~iSS~ag~~g~~g~~~Y~a 2036 (2512)
T 2vz8_A         1962 LGPVGGVFNLAMVLRDA--VLENQTPEFFQDVSKPKYSGTANLDRVTREACPE---LDYFVIFSSVSCGRGNAGQANYGF 2036 (2512)
T ss_dssp             HSCEEEEEECCCC------------------CTTTTHHHHHHHHHHHHHHCTT---CCEEEEECCHHHHTTCTTCHHHHH
T ss_pred             cCCCcEEEECCCcCCCC--chhhCCHHHHHHHHHHHHHHHHHHHHHHHHhccc---CCEEEEecchhhcCCCCCcHHHHH
Confidence            79999999999987654  7889999999999999999999999999998865   479999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCccc
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLA  200 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~  200 (264)
                      +|+++++|++..+.+    |+...++..|.+.
T Consensus      2037 aKaal~~l~~~rr~~----Gl~~~a~~~g~~~ 2064 (2512)
T 2vz8_A         2037 ANSAMERICEKRRHD----GLPGLAVQWGAIG 2064 (2512)
T ss_dssp             HHHHHHHHHHHHHHT----TSCCCEEEECCBC
T ss_pred             HHHHHHHHHHHHHHC----CCcEEEEEccCcC
Confidence            999999999987765    7777777777654

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.89  E-value=2.7e-22  Score=174.69  Aligned_cols=171  Identities=17%  Similarity=0.180  Sum_probs=133.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHH-HcCCcEEEEecCchhh--------HHHHHh---hhCC----Cc---EEEEEecCCCH
Q 041914           15 GKVAIITGGASGIGETTARLFA-DHGARMIVIADIQDEL--------GRQVAT---SIGV----GK---CHYVHCDVTNE   75 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~-~~g~~v~~~~~~~~~~--------~~~~~~---~~~~----~~---~~~~~~D~s~~   75 (264)
                      ++++|||||+|+||++++++|+ ++|++|+++.|.....        ...+.+   ....    ..   +.++.+|++|.
T Consensus         2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~   81 (397)
T 1gy8_A            2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (397)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence            3589999999999999999999 9999998888765432        222221   1111    13   78999999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      +++.+++++    ++++|+|||||+.....      .+.+++++.+++|+.+++++++++.    +.+ .++||++||..
T Consensus        82 ~~~~~~~~~----~~~~d~vih~A~~~~~~------~~~~~~~~~~~~Nv~g~~~ll~a~~----~~~-~~~iv~~SS~~  146 (397)
T 1gy8_A           82 DFLNGVFTR----HGPIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAML----LHK-CDKIIFSSSAA  146 (397)
T ss_dssp             HHHHHHHHH----SCCCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGG
T ss_pred             HHHHHHHHh----cCCCCEEEECCCccCcC------cchhhHHHHHHHHhHHHHHHHHHHH----HhC-CCEEEEECCHH
Confidence            998887763    45699999999975421      1345788999999999999999863    334 57999999976


Q ss_pred             CCCCCC------------------CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcc
Q 041914          156 GSCGGK------------------RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPL  203 (264)
Q Consensus       156 ~~~~~~------------------~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  203 (264)
                      ......                  +...|+.+|++.+.+++.++.++   |++++++.|+.+.++.
T Consensus       147 v~g~~~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             HhCCCCcccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            542221                  36789999999999999999887   8999999999998764

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.89  E-value=3.6e-23  Score=166.80  Aligned_cols=206  Identities=9%  Similarity=-0.041  Sum_probs=151.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|+||++++++|+++|++|+++.|+.++...     . ...+.++.+|++|.+++.++++       ++|+|
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~-~~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   71 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI-----E-NEHLKVKKADVSSLDEVCEVCK-------GADAV   71 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC-----C-CTTEEEECCCTTCHHHHHHHHT-------TCSEE
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh-----c-cCceEEEEecCCCHHHHHHHhc-------CCCEE
Confidence            689999999999999999999999999999988664321     1 1468899999999999988876       68999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC----------CCCch
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG----------KRRTD  165 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~----------~~~~~  165 (264)
                      ||++|.....            .+.+++|+.++.++++++.    +.+ .+++|++||.....+.          .+...
T Consensus        72 i~~a~~~~~~------------~~~~~~n~~~~~~l~~~~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~  134 (227)
T 3dhn_A           72 ISAFNPGWNN------------PDIYDETIKVYLTIIDGVK----KAG-VNRFLMVGGAGSLFIAPGLRLMDSGEVPENI  134 (227)
T ss_dssp             EECCCC------------------CCSHHHHHHHHHHHHHH----HTT-CSEEEEECCSTTSEEETTEEGGGTTCSCGGG
T ss_pred             EEeCcCCCCC------------hhHHHHHHHHHHHHHHHHH----HhC-CCEEEEeCChhhccCCCCCccccCCcchHHH
Confidence            9999864221            1268889999888888764    334 4699999998765432          34678


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |+.+|.+.+.+.+.++.+   .+++++.++||.+.++.......  ...  ............+++++|+|++++.++..
T Consensus       135 Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~~~~~~~~--~~~--~~~~~~~~~~~~~i~~~Dva~ai~~~l~~  207 (227)
T 3dhn_A          135 LPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRPGVRTGRY--RLG--KDDMIVDIVGNSHISVEDYAAAMIDELEH  207 (227)
T ss_dssp             HHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEESCCCCCCC--EEE--SSBCCCCTTSCCEEEHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCCCccccce--eec--CCCcccCCCCCcEEeHHHHHHHHHHHHhC
Confidence            999999999988877654   58999999999998764321110  000  00000001114478999999999999954


Q ss_pred             CCCCeeccEEEecCe
Q 041914          246 DSEFVTGHDLVVDGG  260 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG  260 (264)
                        ....|+.+.+.+.
T Consensus       208 --~~~~g~~~~~~~~  220 (227)
T 3dhn_A          208 --PKHHQERFTIGYL  220 (227)
T ss_dssp             --CCCCSEEEEEECC
T ss_pred             --ccccCcEEEEEee
Confidence              3467999998775

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.89  E-value=7.8e-23  Score=177.31  Aligned_cols=228  Identities=13%  Similarity=0.062  Sum_probs=156.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh----HHHHHhhhC--CC-cEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDEL----GRQVATSIG--VG-KCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~----~~~~~~~~~--~~-~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |++|||||+|+||.+++++|+++|++|+++.|+..+.    .+.+.....  .. .+.++.+|++|.+++.++++..   
T Consensus        29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  105 (381)
T 1n7h_A           29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI---  105 (381)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhc---
Confidence            7899999999999999999999999999988875531    111100000  12 5788999999999999888765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                        ++|+|||+||.....      .+.++++..+++|+.++.++++++.+...+++..++||++||...+.          
T Consensus       106 --~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~  177 (381)
T 1n7h_A          106 --KPDEVYNLAAQSHVA------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETT  177 (381)
T ss_dssp             --CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTS
T ss_pred             --CCCEEEECCcccCcc------ccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCC
Confidence              689999999975321      23567889999999999999999999775532246999999987542          


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-CCChHHHH-hhc---------CCCCCCCC
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-GMPADEVE-KLF---------EPQTPLEG  227 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~-~~~---------~~~~~~~~  227 (264)
                      +..+...|+.+|.+.+.+++.++.++   ++.+..+.|..+..+...... ........ ...         ....+. .
T Consensus       178 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~-~  253 (381)
T 1n7h_A          178 PFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQAS-R  253 (381)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCE-E
T ss_pred             CCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCce-e
Confidence            34557789999999999999998876   444433433333222110000 00000001 000         000111 4


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .++.++|+|+++++++....    ++.+++.+|..
T Consensus       254 ~~v~v~Dva~a~~~~~~~~~----~~~~~i~~~~~  284 (381)
T 1n7h_A          254 DWGFAGDYVEAMWLMLQQEK----PDDYVVATEEG  284 (381)
T ss_dssp             ECEEHHHHHHHHHHHHTSSS----CCEEEECCSCE
T ss_pred             eeEEHHHHHHHHHHHHhCCC----CCeEEeeCCCC
Confidence            57899999999999996543    46888888753

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.89  E-value=1.1e-22  Score=168.16  Aligned_cols=180  Identities=16%  Similarity=0.125  Sum_probs=142.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |++|||||+|+||++++++|+++|++|+++.|+..+..       . ..+.++.+|++|.+++.++++       ++|+|
T Consensus         3 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-------~-~~~~~~~~Dl~d~~~~~~~~~-------~~d~v   67 (267)
T 3ay3_A            3 NRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA-------E-AHEEIVACDLADAQAVHDLVK-------DCDGI   67 (267)
T ss_dssp             EEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC-------C-TTEEECCCCTTCHHHHHHHHT-------TCSEE
T ss_pred             ceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc-------C-CCccEEEccCCCHHHHHHHHc-------CCCEE
Confidence            68999999999999999999999999888888765321       1 256889999999998888775       68999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC------------CC
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK------------RR  163 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~------------~~  163 (264)
                      |||||....          +.+++.+++|+.++.++++++.+    .+ .++||++||.....+.+            +.
T Consensus        68 i~~a~~~~~----------~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~  132 (267)
T 3ay3_A           68 IHLGGVSVE----------RPWNDILQANIIGAYNLYEAARN----LG-KPRIVFASSNHTIGYYPRTTRIDTEVPRRPD  132 (267)
T ss_dssp             EECCSCCSC----------CCHHHHHHHTHHHHHHHHHHHHH----TT-CCEEEEEEEGGGSTTSBTTSCBCTTSCCCCC
T ss_pred             EECCcCCCC----------CCHHHHHHHHHHHHHHHHHHHHH----hC-CCEEEEeCCHHHhCCCCCCCCCCCCCCCCCC
Confidence            999997521          24688999999999999998854    33 57999999987654322            45


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCccc-CcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLA-TPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ..|+.+|++.+.+++.++.+   .|+++++++||.+. ++.       .....           ..+++++|+|++++.+
T Consensus       133 ~~Y~~sK~~~e~~~~~~~~~---~gi~~~~lrp~~v~~~~~-------~~~~~-----------~~~~~~~dva~~~~~~  191 (267)
T 3ay3_A          133 SLYGLSKCFGEDLASLYYHK---FDIETLNIRIGSCFPKPK-------DARMM-----------ATWLSVDDFMRLMKRA  191 (267)
T ss_dssp             SHHHHHHHHHHHHHHHHHHT---TCCCEEEEEECBCSSSCC-------SHHHH-----------HHBCCHHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHHHHHH---cCCCEEEEeceeecCCCC-------CCCee-----------eccccHHHHHHHHHHH
Confidence            78999999999999988654   58999999999984 331       11110           3457899999999998


Q ss_pred             hCCC
Q 041914          243 ACRD  246 (264)
Q Consensus       243 ~s~~  246 (264)
                      +...
T Consensus       192 ~~~~  195 (267)
T 3ay3_A          192 FVAP  195 (267)
T ss_dssp             HHSS
T ss_pred             HhCC
Confidence            8643

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.89  E-value=8.2e-23  Score=175.68  Aligned_cols=224  Identities=15%  Similarity=0.179  Sum_probs=155.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +.+++++++|||||+|+||++++++|+++| ++|+++.|......  . ....  .+. +.+|++|.+.++.+++.  ..
T Consensus        41 ~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-~~~~--~~~-~~~d~~~~~~~~~~~~~--~~  112 (357)
T 2x6t_A           41 GSGIEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK--F-VNLV--DLN-IADYMDKEDFLIQIMAG--EE  112 (357)
T ss_dssp             -------CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG--G-GGTT--TSC-CSEEEEHHHHHHHHHTT--CC
T ss_pred             cccCCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch--h-hccc--Cce-EeeecCcHHHHHHHHhh--cc
Confidence            445778999999999999999999999999 99888887654321  1 1111  122 77899998888877653  12


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC-------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-------  161 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~-------  161 (264)
                      ++++|+|||+|+....        +.+++++.+++|+.++.++++++.+    .+ . ++|++||.....+.+       
T Consensus       113 ~~~~d~Vih~A~~~~~--------~~~~~~~~~~~n~~~~~~ll~a~~~----~~-~-r~V~~SS~~v~g~~~~~~~~E~  178 (357)
T 2x6t_A          113 FGDVEAIFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIESR  178 (357)
T ss_dssp             CSSCCEEEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGCSCSSCCCSSG
T ss_pred             cCCCCEEEECCcccCC--------ccCCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEcchHHhCCCCCCCcCCc
Confidence            4579999999997543        1225788999999999999999865    24 4 999999987653322       


Q ss_pred             ----CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc--cCCChHHHHhhcCCCCC--------C-C
Q 041914          162 ----RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA--YGMPADEVEKLFEPQTP--------L-E  226 (264)
Q Consensus       162 ----~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~~~~~--------~-~  226 (264)
                          +...|+.+|.+.+.+++.++.+   .|++++.+.||.+.++.....  .......+........+        . .
T Consensus       179 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (357)
T 2x6t_A          179 EYEKPLNVFGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFK  255 (357)
T ss_dssp             GGCCCSSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcce
Confidence                3678999999999999998876   389999999999988753210  00011112111111110        0 1


Q ss_pred             CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       227 ~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ..++.++|+|++++.++....    |+.|++++|..
T Consensus       256 ~~~i~v~Dva~ai~~~~~~~~----~~~~~i~~~~~  287 (357)
T 2x6t_A          256 RDFVYVGDVADVNLWFLENGV----SGIFNLGTGRA  287 (357)
T ss_dssp             ECEEEHHHHHHHHHHHHHHCC----CEEEEESCSCC
T ss_pred             EccEEHHHHHHHHHHHHhcCC----CCeEEecCCCc
Confidence            356899999999999986443    78999988753

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.89  E-value=6.4e-23  Score=175.22  Aligned_cols=231  Identities=19%  Similarity=0.171  Sum_probs=159.7

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcC-------CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHG-------ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQV   78 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g-------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~   78 (264)
                      ....+.+++++++|||||+|+||.+++++|+++|       ++|+++.|.......     ....++.++.+|++|.+++
T Consensus         5 ~~~~~~~~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-----~~~~~~~~~~~Dl~d~~~~   79 (342)
T 2hrz_A            5 SGRENLYFQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-----GFSGAVDARAADLSAPGEA   79 (342)
T ss_dssp             CSCCCSCCSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-----TCCSEEEEEECCTTSTTHH
T ss_pred             cCCCCCCccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-----ccCCceeEEEcCCCCHHHH
Confidence            3445556889999999999999999999999999       788888887543211     1224688899999999988


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC
Q 041914           79 KALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC  158 (264)
Q Consensus        79 ~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~  158 (264)
                      .++++      +++|+|||+||....       .+.+++++.+++|+.++.++++++.+...+++..++||++||.....
T Consensus        80 ~~~~~------~~~d~vih~A~~~~~-------~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~  146 (342)
T 2hrz_A           80 EKLVE------ARPDVIFHLAAIVSG-------EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFG  146 (342)
T ss_dssp             HHHHH------TCCSEEEECCCCCHH-------HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCC
T ss_pred             HHHHh------cCCCEEEECCccCcc-------cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhC
Confidence            87775      479999999996531       24567899999999999999999887543221136999999987654


Q ss_pred             CC-C----------CCchhhchHHHHHHHHHHHHHHhC--cCCceEEEee--CCcccCcccccccCCChHHHHh-hcCCC
Q 041914          159 GG-K----------RRTDYHMSKHAVIGLVRSASVQLG--VHGIRVNCVS--PHGLATPLTCHAYGMPADEVEK-LFEPQ  222 (264)
Q Consensus       159 ~~-~----------~~~~y~~sK~al~~~~~~la~e~~--~~~i~v~~v~--pG~v~t~~~~~~~~~~~~~~~~-~~~~~  222 (264)
                      +. +          +...|+.+|.+.+.+++.++.++.  ...+|++.+.  ||...++...-     ...... .....
T Consensus       147 ~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~-----~~~~~~~~~~~~  221 (342)
T 2hrz_A          147 APLPYPIPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGF-----FSNILREPLVGQ  221 (342)
T ss_dssp             SSCCSSBCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGH-----HHHHHHHHHTTC
T ss_pred             CCCCCCcCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHH-----HHHHHHHHhcCC
Confidence            32 2          567899999999999999887642  2235666665  77655432110     011111 11111


Q ss_pred             ---CCCC----CCCCChHHHHHHHHHHhCCCCC-CeeccEEEecC
Q 041914          223 ---TPLE----GVVLRAGHVADAVLFLACRDSE-FVTGHDLVVDG  259 (264)
Q Consensus       223 ---~~~~----~~~~~~edva~~~~~l~s~~~~-~~~G~~i~~dg  259 (264)
                         .|..    ..++.++|++++++.++..... ...|+.+++.|
T Consensus       222 ~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g  266 (342)
T 2hrz_A          222 EAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG  266 (342)
T ss_dssp             CEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC
T ss_pred             CeeccCCCccceeeEehHHHHHHHHHHHhccccccCCccEEEcCC
Confidence               1111    1256899999999998853211 11366788754

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.89  E-value=6.3e-22  Score=168.18  Aligned_cols=223  Identities=13%  Similarity=0.094  Sum_probs=159.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|+||++++++|+++|++|+++.|......+    .+. .++.++.+|++|.+++.+++++     .++|+|
T Consensus         2 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~D~~~~~~~~~~~~~-----~~~d~v   71 (330)
T 2c20_A            2 NSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED----AIT-EGAKFYNGDLRDKAFLRDVFTQ-----ENIEAV   71 (330)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG----GSC-TTSEEEECCTTCHHHHHHHHHH-----SCEEEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh----hcC-CCcEEEECCCCCHHHHHHHHhh-----cCCCEE
Confidence            579999999999999999999999999888876543221    111 2578899999999998888764     379999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~  164 (264)
                      ||+|+.....      .+.+++++.+++|+.++.++++++.    +.+ .+++|++||.....           +..+..
T Consensus        72 ih~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~  140 (330)
T 2c20_A           72 MHFAADSLVG------VSMEKPLQYYNNNVYGALCLLEVMD----EFK-VDKFIFSSTAATYGEVDVDLITEETMTNPTN  140 (330)
T ss_dssp             EECCCCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEECCGGGGCSCSSSSBCTTSCCCCSS
T ss_pred             EECCcccCcc------ccccCHHHHHHHHhHHHHHHHHHHH----HcC-CCEEEEeCCceeeCCCCCCCCCcCCCCCCCC
Confidence            9999975321      1345788999999999999998864    333 56999999976543           223467


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-------CChHHHHhhcCCCCC-------------
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-------MPADEVEKLFEPQTP-------------  224 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-------~~~~~~~~~~~~~~~-------------  224 (264)
                      .|+.+|.+.+.+++.++.++   |++++.+.|+.+.++......+       ..............+             
T Consensus       141 ~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~  217 (330)
T 2c20_A          141 TYGETKLAIEKMLHWYSQAS---NLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPD  217 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHTS---SCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSS
T ss_pred             hHHHHHHHHHHHHHHHHHHh---CCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCC
Confidence            89999999999999998774   8999999999988774211110       011122221111100             


Q ss_pred             --CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 --LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 --~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                        ....++.++|+|++++.++........|+.+++.+|..
T Consensus       218 g~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~  257 (330)
T 2c20_A          218 GTCIRDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNG  257 (330)
T ss_dssp             SSCEECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTC
T ss_pred             CceeEeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCC
Confidence              11246789999999999885322222467888877643

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.89  E-value=1e-22  Score=176.00  Aligned_cols=223  Identities=15%  Similarity=0.160  Sum_probs=161.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCC-CHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT-NECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~   87 (264)
                      +.++.++++|||||+|.||.+++++|+++ |++|+++.|+..+....    .....+.++.+|++ |.+++.++++    
T Consensus        19 ~~~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~----~~~~~v~~~~~Dl~~d~~~~~~~~~----   90 (372)
T 3slg_A           19 PGSMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDL----VKHERMHFFEGDITINKEWVEYHVK----   90 (372)
T ss_dssp             ----CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGG----GGSTTEEEEECCTTTCHHHHHHHHH----
T ss_pred             CcccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhh----ccCCCeEEEeCccCCCHHHHHHHhc----
Confidence            45577899999999999999999999999 99999999876554221    12247899999999 9999888886    


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-------
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-------  160 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-------  160 (264)
                         ++|+|||+|+.....      ...++..+.+++|+.++.++++++..    .+  .++|++||...+...       
T Consensus        91 ---~~d~Vih~A~~~~~~------~~~~~~~~~~~~nv~~~~~ll~a~~~----~~--~~~v~~SS~~vyg~~~~~~~~e  155 (372)
T 3slg_A           91 ---KCDVILPLVAIATPA------TYVKQPLRVFELDFEANLPIVRSAVK----YG--KHLVFPSTSEVYGMCADEQFDP  155 (372)
T ss_dssp             ---HCSEEEECBCCCCHH------HHHHCHHHHHHHHTTTTHHHHHHHHH----HT--CEEEEECCGGGGBSCCCSSBCT
T ss_pred             ---cCCEEEEcCccccHH------HHhhCHHHHHHHHHHHHHHHHHHHHH----hC--CcEEEeCcHHHhCCCCCCCCCc
Confidence               689999999976432      12345678899999999998888753    22  599999997543211       


Q ss_pred             -----------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC----C--ChHHHHhhcCCCC
Q 041914          161 -----------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----M--PADEVEKLFEPQT  223 (264)
Q Consensus       161 -----------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~--~~~~~~~~~~~~~  223 (264)
                                 .+...|+.+|.+.+.+++.++.+    |+++..+.|+.+.++.......    .  ....+........
T Consensus       156 ~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~----g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (372)
T 3slg_A          156 DASALTYGPINKPRWIYACSKQLMDRVIWGYGME----GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGE  231 (372)
T ss_dssp             TTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHTT----TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTC
T ss_pred             cccccccCCCCCCCCcHHHHHHHHHHHHHHHHHC----CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCC
Confidence                       34457999999999999988765    8999999999998875432110    0  0111111111111


Q ss_pred             C--------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          224 P--------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       224 ~--------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      +        ....++.++|+|++++.++........|+.|++.+
T Consensus       232 ~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~  275 (372)
T 3slg_A          232 NISLVDGGSQKRAFTYVDDGISALMKIIENSNGVATGKIYNIGN  275 (372)
T ss_dssp             CEEEGGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CcEEeCCCceEEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCC
Confidence            1        11247789999999999997654446789999998

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.89  E-value=4.3e-22  Score=168.18  Aligned_cols=214  Identities=14%  Similarity=0.059  Sum_probs=124.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|++|||||+|+||++++++|+++|++|+++.|+..+          . .  ++.+|++|.+++.++++..     ++|+
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----------~-~--~~~~Dl~d~~~~~~~~~~~-----~~d~   63 (315)
T 2ydy_A            2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----------P-K--FEQVNLLDSNAVHHIIHDF-----QPHV   63 (315)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC-------------------------------CHHHHHHH-----CCSE
T ss_pred             CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----------C-C--eEEecCCCHHHHHHHHHhh-----CCCE
Confidence            5789999999999999999999999998888875433          0 2  6789999999988888755     6999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----------CCCCc
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----------GKRRT  164 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----------~~~~~  164 (264)
                      |||+||.....      .+.+++++.+++|+.++.++++++.+    .+  +++|++||.....+          ..+..
T Consensus        64 vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~v~~~~~~~~~E~~~~~~~~  131 (315)
T 2ydy_A           64 IVHCAAERRPD------VVENQPDAASQLNVDASGNLAKEAAA----VG--AFLIYISSDYVFDGTNPPYREEDIPAPLN  131 (315)
T ss_dssp             EEECC-------------------------CHHHHHHHHHHHH----HT--CEEEEEEEGGGSCSSSCSBCTTSCCCCCS
T ss_pred             EEECCcccChh------hhhcCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEchHHHcCCCCCCCCCCCCCCCcC
Confidence            99999975432      24567899999999999999999875    23  49999999876543          35567


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHH-h--hc-CCCCCCCCCCCChHHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE-K--LF-EPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~--~~-~~~~~~~~~~~~~edva~~~~  240 (264)
                      .|+.+|.+.+.+++.++.++  ..||.+.|. |+..++.. ........... .  .. ....+. ..++.++|+|++++
T Consensus       132 ~Y~~sK~~~e~~~~~~~~~~--~~lR~~~v~-G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~a~~  206 (315)
T 2ydy_A          132 LYGKTKLDGEKAVLENNLGA--AVLRIPILY-GEVEKLEE-SAVTVMFDKVQFSNKSANMDHWQQ-RFPTHVKDVATVCR  206 (315)
T ss_dssp             HHHHHHHHHHHHHHHHCTTC--EEEEECSEE-CSCSSGGG-STTGGGHHHHHCCSSCEEEECSSB-BCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCe--EEEeeeeee-CCCCcccc-cHHHHHHHHHHhcCCCeeeccCce-ECcEEHHHHHHHHH
Confidence            89999999999998875332  234444444 44333100 00000001111 0  00 001122 56789999999999


Q ss_pred             HHhCCC-CCCeeccEEEecCeeec
Q 041914          241 FLACRD-SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       241 ~l~s~~-~~~~~G~~i~~dgG~~~  263 (264)
                      +++.+. .....|+.+++++|..+
T Consensus       207 ~~~~~~~~~~~~~~~~~i~~~~~~  230 (315)
T 2ydy_A          207 QLAEKRMLDPSIKGTFHWSGNEQM  230 (315)
T ss_dssp             HHHHHHHTCTTCCEEEECCCSCCB
T ss_pred             HHHHhhccccCCCCeEEEcCCCcc
Confidence            998642 22356889999988654

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.89  E-value=8.6e-22  Score=170.03  Aligned_cols=227  Identities=12%  Similarity=0.081  Sum_probs=152.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH-HHHHhhh-----CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-RQVATSI-----GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +|++|||||+|+||++++++|+++|++|+++.|+..... +.+....     ...++.++.+|++|.+++.++++..   
T Consensus         1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (372)
T 1db3_A            1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (372)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhc---
Confidence            378999999999999999999999999888888754321 1111111     1236888999999999999988865   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---------  159 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---------  159 (264)
                        ++|+||||||.....      .+.+++++.+++|+.++.++++++.+...+ + .++||++||......         
T Consensus        78 --~~d~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~-~~~iv~~SS~~v~g~~~~~~~~E~  147 (372)
T 1db3_A           78 --QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKET  147 (372)
T ss_dssp             --CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             --CCCEEEECCcccCcc------ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEeCChhhhCCCCCCCCCcc
Confidence              689999999975432      233467889999999999999998765432 1 379999999765432         


Q ss_pred             --CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-CCChHHHHhh-cCCCC--------CCCC
Q 041914          160 --GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-GMPADEVEKL-FEPQT--------PLEG  227 (264)
Q Consensus       160 --~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-~~~~~~~~~~-~~~~~--------~~~~  227 (264)
                        ..+...|+.+|++.+.+++.++.++   ++.+..+.|..+..+...... .......... .....        ....
T Consensus       148 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  224 (372)
T 1db3_A          148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (372)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCcee
Confidence              2346789999999999999999876   566666666555443211000 0000111111 11110        1113


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      .++.++|+|++++.++....    ++.+++.+|.
T Consensus       225 ~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  254 (372)
T 1db3_A          225 DWGHAKDYVKMQWMMLQQEQ----PEDFVIATGV  254 (372)
T ss_dssp             CCEEHHHHHHHHHHTTSSSS----CCCEEECCCC
T ss_pred             eeeEHHHHHHHHHHHHhcCC----CceEEEcCCC
Confidence            47899999999999885432    4678877664

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.88  E-value=6.6e-22  Score=168.40  Aligned_cols=227  Identities=14%  Similarity=0.095  Sum_probs=157.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH-HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .++++|||||+|+||++++++|+++|++|+++.|+..+.. ..+........+.++.+|++|.+++.++++..     ++
T Consensus        13 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~   87 (335)
T 1rpn_A           13 MTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QP   87 (335)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             cCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHc-----CC
Confidence            4689999999999999999999999999999988765421 11211112246889999999999999888765     68


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GK  161 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~  161 (264)
                      |+|||+||.....      .+.+++++.+++|+.++.++++++.+.    +..+++|++||...+.+           ..
T Consensus        88 d~Vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~~~----~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~  157 (335)
T 1rpn_A           88 QEVYNLAAQSFVG------ASWNQPVTTGVVDGLGVTHLLEAIRQF----SPETRFYQASTSEMFGLIQAERQDENTPFY  157 (335)
T ss_dssp             SEEEECCSCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHHH----CTTSEEEEEEEGGGGCSCSSSSBCTTSCCC
T ss_pred             CEEEECccccchh------hhhhChHHHHHHHHHHHHHHHHHHHHh----CCCCeEEEEeCHHHhCCCCCCCCCcccCCC
Confidence            9999999964321      112356789999999999999988653    21269999999765432           22


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-CChHHHH-hhcCCCCC--------CCCCCCC
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-MPADEVE-KLFEPQTP--------LEGVVLR  231 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~-~~~~~~~~--------~~~~~~~  231 (264)
                      +...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+....... ....... .......+        ....++.
T Consensus       158 p~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~  234 (335)
T 1rpn_A          158 PRSPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGF  234 (335)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEE
T ss_pred             CCChhHHHHHHHHHHHHHHHHHc---CCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEE
Confidence            35689999999999999998775   6888888888877654221000 0001111 11111111        1134778


Q ss_pred             hHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          232 AGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       232 ~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++|+|++++.++....    ++.+++.+|..
T Consensus       235 v~Dva~a~~~~~~~~~----~~~~ni~~~~~  261 (335)
T 1rpn_A          235 AGDYVEAMWLMLQQDK----ADDYVVATGVT  261 (335)
T ss_dssp             HHHHHHHHHHHHHSSS----CCCEEECCSCE
T ss_pred             HHHHHHHHHHHHhcCC----CCEEEEeCCCC
Confidence            8999999999986432    36788877643

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.88  E-value=4.5e-22  Score=172.16  Aligned_cols=226  Identities=12%  Similarity=0.056  Sum_probs=156.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh----HHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDEL----GRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |++|||||+|+||++++++|+++|++|+++.|+....    .+.+.+..   ....+.++.+|++|.+++.++++..   
T Consensus        25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---  101 (375)
T 1t2a_A           25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---  101 (375)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhc---
Confidence            6899999999999999999999999999988875431    11110000   1236788999999999999888765   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                        ++|+||||||.....      .+.+++++.+++|+.++.++++++.+...+ + .++||++||.....          
T Consensus       102 --~~d~vih~A~~~~~~------~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~-~-~~~iv~~SS~~~~~~~~~~~~~E~  171 (375)
T 1t2a_A          102 --KPTEIYNLGAQSHVK------ISFDLAEYTADVDGVGTLRLLDAVKTCGLI-N-SVKFYQASTSELYGKVQEIPQKET  171 (375)
T ss_dssp             --CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             --CCCEEEECCCccccc------ccccCHHHHHHHHHHHHHHHHHHHHHhCCC-c-cceEEEecchhhhCCCCCCCCCcc
Confidence              689999999975321      234678899999999999999998764431 1 26999999987653          


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-CChHHHH-hhcCCCC--------CCCC
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-MPADEVE-KLFEPQT--------PLEG  227 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~-~~~~~~~--------~~~~  227 (264)
                       +..+...|+.+|++.+.+++.++.++   ++.+..+.|+.+..+....... ....... .......        ....
T Consensus       172 ~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~  248 (375)
T 1t2a_A          172 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  248 (375)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHHh---CCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCcee
Confidence             22356789999999999999998875   6787778877665543211000 0000111 1111110        1113


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      .++.++|+|++++.++....    ++.+++.+|.
T Consensus       249 ~~i~v~Dva~a~~~~~~~~~----~~~~ni~~~~  278 (375)
T 1t2a_A          249 DWGHAKDYVEAMWLMLQNDE----PEDFVIATGE  278 (375)
T ss_dssp             CCEEHHHHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             eeEEHHHHHHHHHHHHhcCC----CceEEEeCCC
Confidence            47789999999999886432    3567776654

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.88  E-value=4.6e-22  Score=169.89  Aligned_cols=219  Identities=12%  Similarity=0.089  Sum_probs=156.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~id   93 (264)
                      +++|||||+|+||++++++|+++ |++|+++.|+..+...    .....++.++.+|++| .+.+.++++       ++|
T Consensus         1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~-------~~d   69 (345)
T 2bll_A            1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVK-------KCD   69 (345)
T ss_dssp             CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTTCTTEEEEECCTTTCSHHHHHHHH-------HCS
T ss_pred             CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHH----hhcCCCeEEEeccccCcHHHHHhhcc-------CCC
Confidence            47999999999999999999998 8999999887654321    1122468899999998 455666654       579


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-------------  160 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-------------  160 (264)
                      +|||+||.....      ...+++++.+++|+.++.++++++..    .+  +++|++||.......             
T Consensus        70 ~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~SS~~v~g~~~~~~~~e~~~~~~  137 (345)
T 2bll_A           70 VVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR--KRIIFPSTSEVYGMCSDKYFDEDHSNLI  137 (345)
T ss_dssp             EEEECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT--CEEEEECCGGGGBTCCCSSBCTTTCCCB
T ss_pred             EEEEcccccCcc------chhcCHHHHHHHHHHHHHHHHHHHHH----hC--CeEEEEecHHHcCCCCCCCcCCcccccc
Confidence            999999975321      12345778999999999998888743    22  699999997654221             


Q ss_pred             -----CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----CC--ChHHHHhh-cCCCC-----
Q 041914          161 -----KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----GM--PADEVEKL-FEPQT-----  223 (264)
Q Consensus       161 -----~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~--~~~~~~~~-~~~~~-----  223 (264)
                           .+...|+.+|.+.+.+++.++.++   |++++++.||.+.++......    ..  ........ .....     
T Consensus       138 ~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  214 (345)
T 2bll_A          138 VGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLID  214 (345)
T ss_dssp             CCCTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGG
T ss_pred             cCcccCcccccHHHHHHHHHHHHHHHHhc---CCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEEC
Confidence                 123379999999999999998775   899999999999887542110    00  01111111 11110     


Q ss_pred             --CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          224 --PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       224 --~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                        .....++.++|+|++++.++.......+|+.+++.+|
T Consensus       215 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~  253 (345)
T 2bll_A          215 GGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  253 (345)
T ss_dssp             GSCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCT
T ss_pred             CCCEEEEEEEHHHHHHHHHHHHhhccccCCCceEEeCCC
Confidence              0113478999999999999865444467899999986

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.88  E-value=5.5e-22  Score=169.58  Aligned_cols=221  Identities=15%  Similarity=0.125  Sum_probs=152.5

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..++++++|||||+|+||++++++|+++|++|+++.|........+.......++.++.+|+.+..            +.
T Consensus        23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~------------~~   90 (343)
T 2b69_A           23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL------------YI   90 (343)
T ss_dssp             ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC------------CC
T ss_pred             cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh------------hc
Confidence            457789999999999999999999999999999888864432222222222346889999998752            35


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------  158 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------  158 (264)
                      ++|+|||+|+.....  ..    .+++++.+++|+.++.++++++.+    .+  .++|++||.....            
T Consensus        91 ~~d~vih~A~~~~~~--~~----~~~~~~~~~~n~~~~~~l~~a~~~----~~--~~~v~~SS~~v~g~~~~~~~~E~~~  158 (343)
T 2b69_A           91 EVDQIYHLASPASPP--NY----MYNPIKTLKTNTIGTLNMLGLAKR----VG--ARLLLASTSEVYGDPEVHPQSEDYW  158 (343)
T ss_dssp             CCSEEEECCSCCSHH--HH----TTCHHHHHHHHHHHHHHHHHHHHH----HT--CEEEEEEEGGGGBSCSSSSBCTTCC
T ss_pred             CCCEEEECccccCch--hh----hhCHHHHHHHHHHHHHHHHHHHHH----hC--CcEEEECcHHHhCCCCCCCCccccc
Confidence            799999999975421  11    124568899999999999998754    23  3899999976541            


Q ss_pred             ----CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh-cCCC-------CCCC
Q 041914          159 ----GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL-FEPQ-------TPLE  226 (264)
Q Consensus       159 ----~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~-------~~~~  226 (264)
                          +..+...|+.+|.+.+.+++.++.++   +++++.+.||.+.++............+... ....       ....
T Consensus       159 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T 2b69_A          159 GHVNPIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQT  235 (343)
T ss_dssp             CBCCSSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCE
T ss_pred             ccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeE
Confidence                33345679999999999999988775   8999999999998875321100011111111 1111       0011


Q ss_pred             CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          227 GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       227 ~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ..++.++|+|++++.++...    .|+.+++.+|..
T Consensus       236 ~~~v~v~Dva~a~~~~~~~~----~~~~~~i~~~~~  267 (343)
T 2b69_A          236 RAFQYVSDLVNGLVALMNSN----VSSPVNLGNPEE  267 (343)
T ss_dssp             EECEEHHHHHHHHHHHHTSS----CCSCEEESCCCE
T ss_pred             EeeEeHHHHHHHHHHHHhcC----CCCeEEecCCCC
Confidence            34779999999999998643    266788887753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.88  E-value=4.5e-23  Score=175.93  Aligned_cols=223  Identities=16%  Similarity=0.169  Sum_probs=145.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH--HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +|++|||||+|+||++++++|+++|++|+++.|+.....  ..+.......++.++.+|++|.+++.++++       ++
T Consensus         9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-------~~   81 (338)
T 2rh8_A            9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-------GC   81 (338)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-------TC
T ss_pred             CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-------CC
Confidence            689999999999999999999999999888787654321  111111112367889999999888777765       68


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----C--------
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----G--------  159 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----~--------  159 (264)
                      |+|||+|+.....       ..+..++.+++|+.+++++++++.+..   + .++||++||..+..     +        
T Consensus        82 D~Vih~A~~~~~~-------~~~~~~~~~~~nv~gt~~ll~aa~~~~---~-v~r~V~~SS~~~~~~~~~~~~~~~~~E~  150 (338)
T 2rh8_A           82 DFVFHVATPVHFA-------SEDPENDMIKPAIQGVVNVMKACTRAK---S-VKRVILTSSAAAVTINQLDGTGLVVDEK  150 (338)
T ss_dssp             SEEEEESSCCCC----------------CHHHHHHHHHHHHHHHHCT---T-CCEEEEECCHHHHHHHHHTCSCCCCCTT
T ss_pred             CEEEEeCCccCCC-------CCCcHHHHHHHHHHHHHHHHHHHHHcC---C-cCEEEEEecHHHeecCCcCCCCcccChh
Confidence            9999999854211       111234589999999999999886532   2 46999999976210     0        


Q ss_pred             ----------C-CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC-----
Q 041914          160 ----------G-KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT-----  223 (264)
Q Consensus       160 ----------~-~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-----  223 (264)
                                . +....|+.||.+.+.+++.++.+   .|++++++.|+.+.++.....................     
T Consensus       151 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~---~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~  227 (338)
T 2rh8_A          151 NWTDIEFLTSAKPPTWGYPASKTLAEKAAWKFAEE---NNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLING  227 (338)
T ss_dssp             TTTCC-------CCCCCCTTSCCHHHHHHHHHHHH---HTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHH
T ss_pred             hccchhhccccCCccchHHHHHHHHHHHHHHHHHH---cCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccccc
Confidence                      0 01126999999999988877655   3899999999999998653211100000000000000     


Q ss_pred             ------CC-CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          224 ------PL-EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       224 ------~~-~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                            +. ...++.++|+|+++++++...  ...|.++..+++
T Consensus       228 ~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~--~~~~~~~~~~~~  269 (338)
T 2rh8_A          228 MKGMQMLSGSVSIAHVEDVCRAHIFVAEKE--SASGRYICCAAN  269 (338)
T ss_dssp             HHHHHHHHSSEEEEEHHHHHHHHHHHHHCT--TCCEEEEECSEE
T ss_pred             ccccccccCcccEEEHHHHHHHHHHHHcCC--CcCCcEEEecCC
Confidence                  00 014789999999999998542  345654444443

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.87  E-value=2.7e-21  Score=163.08  Aligned_cols=209  Identities=14%  Similarity=0.075  Sum_probs=154.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|.||++++++|.++|++|+++.|+.... . +.      .+.++.+|++ .+++.++++       ++|+|
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~------~~~~~~~Dl~-~~~~~~~~~-------~~d~V   66 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNK-A-IN------DYEYRVSDYT-LEDLINQLN-------DVDAV   66 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------------CCEEEECCCC-HHHHHHHTT-------TCSEE
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCcc-c-CC------ceEEEEcccc-HHHHHHhhc-------CCCEE
Confidence            7899999999999999999999999999999983322 2 21      5788999999 888887765       79999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~  164 (264)
                      ||+|+.....          ++++.+++|+.++.++++++.    +.+ ..++|++||.....           +..+..
T Consensus        67 ih~a~~~~~~----------~~~~~~~~n~~~~~~ll~a~~----~~~-~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~  131 (311)
T 3m2p_A           67 VHLAATRGSQ----------GKISEFHDNEILTQNLYDACY----ENN-ISNIVYASTISAYSDETSLPWNEKELPLPDL  131 (311)
T ss_dssp             EECCCCCCSS----------SCGGGTHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGGGCCCGGGCSBCTTSCCCCSS
T ss_pred             EEccccCCCC----------ChHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEEccHHHhCCCCCCCCCCCCCCCCCc
Confidence            9999976432          345678899999988888874    334 56899999976542           223467


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC--------CCCCCCChHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP--------LEGVVLRAGHVA  236 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~edva  236 (264)
                      .|+.+|.+.+.+++.++.+   .|++++.+.|+.+.++.....  .....+........+        ....++.++|+|
T Consensus       132 ~Y~~sK~~~E~~~~~~~~~---~g~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva  206 (311)
T 3m2p_A          132 MYGVSKLACEHIGNIYSRK---KGLCIKNLRFAHLYGFNEKNN--YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAA  206 (311)
T ss_dssp             HHHHHHHHHHHHHHHHHHH---SCCEEEEEEECEEECSCC--C--CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHH
T ss_pred             hhHHHHHHHHHHHHHHHHH---cCCCEEEEeeCceeCcCCCCC--CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHH
Confidence            8999999999999998876   489999999999988754311  111222222111111        113477899999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++++.++....   .|+.+++.+|..+
T Consensus       207 ~a~~~~~~~~~---~~~~~~i~~~~~~  230 (311)
T 3m2p_A          207 KSVIYALKQEK---VSGTFNIGSGDAL  230 (311)
T ss_dssp             HHHHHHTTCTT---CCEEEEECCSCEE
T ss_pred             HHHHHHHhcCC---CCCeEEeCCCCcc
Confidence            99999996543   7889999887644

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.87  E-value=3.4e-21  Score=164.25  Aligned_cols=226  Identities=13%  Similarity=0.124  Sum_probs=150.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch---hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQD---ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++|||||+|+||++++++|+++|++|+++.+...   +..+.+.+.. ..++.++.+|++|.+++.++++..     ++|
T Consensus         2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~-----~~D   75 (338)
T 1udb_A            2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLG-GKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHH-TSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhc-CCcceEEEccCCCHHHHHHHhhcc-----CCC
Confidence            6899999999999999999999999888765432   2222222211 235778999999999988887642     699


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CC-C
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GG-K  161 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~-~  161 (264)
                      +||||||.....      ...+++++.+++|+.++.++++++.    +.+ .++||++||.....           +. +
T Consensus        76 ~vih~A~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~----~~~-~~~iv~~SS~~~~g~~~~~~~~e~~~~~~  144 (338)
T 1udb_A           76 TVIHFAGLKAVG------ESVQKPLEYYDNNVNGTLRLISAMR----AAN-VKNFIFSSSATVYGDNPKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             EEEECCccCccc------cchhcHHHHHHHHHHHHHHHHHHHH----hcC-CCeEEEEccHHHhCCCCCCCcCcccCCCC
Confidence            999999975321      1234567889999999999988653    334 57999999976542           11 3


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--------CChHHHHhhcC-CCC---------
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--------MPADEVEKLFE-PQT---------  223 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~-~~~---------  223 (264)
                      +...|+.+|++.+.+++.++.++  .++++..+.|+.+..+......+        ........... ...         
T Consensus       145 ~~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  222 (338)
T 1udb_A          145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred             CCChHHHHHHHHHHHHHHHHHhc--CCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcc
Confidence            36789999999999999998874  37888888886655431100000        00111111111 000         


Q ss_pred             C-----CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          224 P-----LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       224 ~-----~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +     ....++.++|+|++++.++........++.+++.+|.
T Consensus       223 ~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~  265 (338)
T 1udb_A          223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGV  265 (338)
T ss_dssp             SSSSSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSC
T ss_pred             cCCCCceeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCC
Confidence            0     1124678999999998877432112234788887664

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.87  E-value=4.2e-21  Score=153.80  Aligned_cols=201  Identities=12%  Similarity=0.080  Sum_probs=132.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||++++++|+++|++|+++.|+.++.... .     ..+.++.+|++|.++  +       .+.++|+||
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~-----~~~~~~~~D~~d~~~--~-------~~~~~d~vi   66 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-H-----KDINILQKDIFDLTL--S-------DLSDQNVVV   66 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-C-----SSSEEEECCGGGCCH--H-------HHTTCSEEE
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-c-----CCCeEEeccccChhh--h-------hhcCCCEEE
Confidence            589999999999999999999999999999987654322 1     357899999999876  2       224799999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC------------CCc
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK------------RRT  164 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~------------~~~  164 (264)
                      ||+|.....               ...|+.+    ++.+++.+++.+ .+++|++||..+..+.+            +..
T Consensus        67 ~~ag~~~~~---------------~~~~~~~----~~~l~~a~~~~~-~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  126 (221)
T 3ew7_A           67 DAYGISPDE---------------AEKHVTS----LDHLISVLNGTV-SPRLLVVGGAASLQIDEDGNTLLESKGLREAP  126 (221)
T ss_dssp             ECCCSSTTT---------------TTSHHHH----HHHHHHHHCSCC-SSEEEEECCCC-------------------CC
T ss_pred             ECCcCCccc---------------cchHHHH----HHHHHHHHHhcC-CceEEEEecceEEEcCCCCccccccCCCCCHH
Confidence            999974221               2334444    555566667665 68999999988754332            346


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+.+|.+.+.+. .+..  ...|++++.++||.+.++....  .. .......+.... .....++++|+|++++.++.
T Consensus       127 ~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~g~~~~~--~~-~~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~l~  199 (221)
T 3ew7_A          127 YYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMFEPGERT--GD-YQIGKDHLLFGS-DGNSFISMEDYAIAVLDEIE  199 (221)
T ss_dssp             CSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCCCCC-------------------------CCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-HHHh--hccCccEEEEeCcceecCCCcc--Cc-eEeccccceecC-CCCceEeHHHHHHHHHHHHh
Confidence            6999999998873 2222  1568999999999998872110  00 000000000001 11347899999999999996


Q ss_pred             CCCCCeeccEEEecCee
Q 041914          245 RDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~  261 (264)
                      ..  ...|+.|++.+-.
T Consensus       200 ~~--~~~g~~~~~~~~~  214 (221)
T 3ew7_A          200 RP--NHLNEHFTVAGKL  214 (221)
T ss_dssp             SC--SCTTSEEECCC--
T ss_pred             Cc--cccCCEEEECCCC
Confidence            43  4668999988754

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.87  E-value=5.3e-21  Score=153.66  Aligned_cols=199  Identities=9%  Similarity=-0.026  Sum_probs=137.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||++++++|+++|++|+++.|+.++....     ....+.++.+|++|.++         +.++++|+||
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-----~~~~~~~~~~D~~d~~~---------~~~~~~d~vi   67 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-----LGATVATLVKEPLVLTE---------ADLDSVDAVV   67 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-----TCTTSEEEECCGGGCCH---------HHHTTCSEEE
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-----cCCCceEEecccccccH---------hhcccCCEEE
Confidence            599999999999999999999999999999876554321     12367899999999877         2235799999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCC--------------
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR--------------  162 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~--------------  162 (264)
                      ||+|.....  .           ...+|+.++    +.+++.+++.+  +++|++||..+..+.+.              
T Consensus        68 ~~ag~~~~~--~-----------~~~~n~~~~----~~l~~a~~~~~--~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~  128 (224)
T 3h2s_A           68 DALSVPWGS--G-----------RGYLHLDFA----THLVSLLRNSD--TLAVFILGSASLAMPGADHPMILDFPESAAS  128 (224)
T ss_dssp             ECCCCCTTS--S-----------CTHHHHHHH----HHHHHTCTTCC--CEEEEECCGGGSBCTTCSSCGGGGCCGGGGG
T ss_pred             ECCccCCCc--c-----------hhhHHHHHH----HHHHHHHHHcC--CcEEEEecceeeccCCCCccccccCCCCCcc
Confidence            999986221  1           024566665    44555555554  79999999876654433              


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ...|+.+|.+.+.+ +   ...+..+++++.++||.+.++.....    .......+. .......+++++|+|++++.+
T Consensus       129 ~~~y~~sK~~~e~~-~---~~~~~~~i~~~ivrp~~v~g~~~~~~----~~~~~~~~~-~~~~~~~~i~~~DvA~~~~~~  199 (224)
T 3h2s_A          129 QPWYDGALYQYYEY-Q---FLQMNANVNWIGISPSEAFPSGPATS----YVAGKDTLL-VGEDGQSHITTGNMALAILDQ  199 (224)
T ss_dssp             STTHHHHHHHHHHH-H---HHTTCTTSCEEEEEECSBCCCCCCCC----EEEESSBCC-CCTTSCCBCCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHH-H---HHHhcCCCcEEEEcCccccCCCcccC----ceecccccc-cCCCCCceEeHHHHHHHHHHH
Confidence            67899999998854 1   22245689999999999998732111    000000011 111224578999999999999


Q ss_pred             hCCCCCCeeccEEEecC
Q 041914          243 ACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dg  259 (264)
                      +...  ...|+.|.+.+
T Consensus       200 l~~~--~~~g~~~~~~~  214 (224)
T 3h2s_A          200 LEHP--TAIRDRIVVRD  214 (224)
T ss_dssp             HHSC--CCTTSEEEEEE
T ss_pred             hcCc--cccCCEEEEec
Confidence            9643  45688888754

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.87  E-value=5.8e-21  Score=160.92  Aligned_cols=218  Identities=15%  Similarity=0.103  Sum_probs=156.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADH--GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ++++|||||+|+||.+++++|+++  |++|+++.|+..+..  +.     .++.++.+|++|.+++.+++++.     ++
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~--~~-----~~~~~~~~D~~d~~~~~~~~~~~-----~~   69 (312)
T 2yy7_A            2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD--VV-----NSGPFEVVNALDFNQIEHLVEVH-----KI   69 (312)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH--HH-----HSSCEEECCTTCHHHHHHHHHHT-----TC
T ss_pred             CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc--cc-----CCCceEEecCCCHHHHHHHHhhc-----CC
Confidence            478999999999999999999999  999999888765421  11     13568899999999988887654     68


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------------C
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------------G  160 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------------~  160 (264)
                      |+|||+|+.....       ..+++++.+++|+.++.++++++.+    .+ .+++|++||.....+            .
T Consensus        70 d~vih~a~~~~~~-------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~  137 (312)
T 2yy7_A           70 TDIYLMAALLSAT-------AEKNPAFAWDLNMNSLFHVLNLAKA----KK-IKKIFWPSSIAVFGPTTPKENTPQYTIM  137 (312)
T ss_dssp             CEEEECCCCCHHH-------HHHCHHHHHHHHHHHHHHHHHHHHT----TS-CSEEECCEEGGGCCTTSCSSSBCSSCBC
T ss_pred             CEEEECCccCCCc-------hhhChHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEeccHHHhCCCCCCCCccccCcC
Confidence            9999999864321       2356788999999999999988743    33 469999999876532            2


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC---ChHHHHhhcCCC-------CCCCCCCC
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM---PADEVEKLFEPQ-------TPLEGVVL  230 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~  230 (264)
                      .+...|+.+|.+.+.+++.++.++   |++++.+.|+.+.++........   ....+.......       ......++
T Consensus       138 ~~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  214 (312)
T 2yy7_A          138 EPSTVYGISKQAGERWCEYYHNIY---GVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMM  214 (312)
T ss_dssp             CCCSHHHHHHHHHHHHHHHHHHHH---CCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEE
T ss_pred             CCCchhHHHHHHHHHHHHHHHHhc---CCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeee
Confidence            346789999999999999998775   79999999999887543211100   011111111111       01113467


Q ss_pred             ChHHHHHHHHHHhCCCCCCe-eccEEEecC
Q 041914          231 RAGHVADAVLFLACRDSEFV-TGHDLVVDG  259 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~-~G~~i~~dg  259 (264)
                      .++|+|++++.++....... .|+.+++.+
T Consensus       215 ~v~Dva~a~~~~~~~~~~~~~~~~~~ni~~  244 (312)
T 2yy7_A          215 YMDDAIDATINIMKAPVEKIKIHSSYNLAA  244 (312)
T ss_dssp             EHHHHHHHHHHHHHSCGGGCCCSSCEECCS
T ss_pred             eHHHHHHHHHHHHhCcccccccCceEEeCC
Confidence            88999999999886443222 257888875

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.86  E-value=4.9e-23  Score=164.50  Aligned_cols=202  Identities=14%  Similarity=0.070  Sum_probs=146.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .++++|||||+|+||++++++|+++|+  +|+++.|+..+         ...++.++.+|++|.+++.+++         
T Consensus         4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~---------~~~~~~~~~~D~~~~~~~~~~~---------   65 (215)
T 2a35_A            4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVGPLAELLPQLDGS---------   65 (215)
T ss_dssp             CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBSCHHHHGGGCCSC---------
T ss_pred             CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc---------cCCCceEEeccccCHHHHHHhh---------
Confidence            368999999999999999999999998  88888887654         1235778899998876655443         


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|++|||+|....        +.+++++.+++|+.++..+++++.+    .+ .+++|++||.....+  +...|+.+|.
T Consensus        66 ~d~vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~Ss~~~~~~--~~~~y~~sK~  130 (215)
T 2a35_A           66 IDTAFCCLGTTIK--------EAGSEEAFRAVDFDLPLAVGKRALE----MG-ARHYLVVSALGADAK--SSIFYNRVKG  130 (215)
T ss_dssp             CSEEEECCCCCHH--------HHSSHHHHHHHHTHHHHHHHHHHHH----TT-CCEEEEECCTTCCTT--CSSHHHHHHH
T ss_pred             hcEEEECeeeccc--------cCCCHHHHHHhhHHHHHHHHHHHHH----cC-CCEEEEECCcccCCC--CccHHHHHHH
Confidence            8999999996431        1345788999999999999988743    33 568999999887643  4568999999


Q ss_pred             HHHHHHHHHHHHhCcCCce-EEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          172 AVIGLVRSASVQLGVHGIR-VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~-v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +++.+++.       .|++ ++.++||.+.++......   .+..........+....+++++|+|++++.++....   
T Consensus       131 ~~e~~~~~-------~~~~~~~~vrp~~v~g~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~---  197 (215)
T 2a35_A          131 ELEQALQE-------QGWPQLTIARPSLLFGPREEFRL---AEILAAPIARILPGKYHGIEACDLARALWRLALEEG---  197 (215)
T ss_dssp             HHHHHHTT-------SCCSEEEEEECCSEESTTSCEEG---GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC---
T ss_pred             HHHHHHHH-------cCCCeEEEEeCceeeCCCCcchH---HHHHHHhhhhccCCCcCcEeHHHHHHHHHHHHhcCC---
Confidence            99988764       3898 999999999987543110   000000000000101245788999999999996542   


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                       |+.+++.++..
T Consensus       198 -~~~~~i~~~~~  208 (215)
T 2a35_A          198 -KGVRFVESDEL  208 (215)
T ss_dssp             -SEEEEEEHHHH
T ss_pred             -CCceEEcHHHH
Confidence             67888877643

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.86  E-value=1.7e-21  Score=162.81  Aligned_cols=196  Identities=15%  Similarity=0.104  Sum_probs=145.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ..+++|||||+|+||++++++|+++|++|+++.|+                    .+|++|.+++.++++..     ++|
T Consensus        11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~Dl~d~~~~~~~~~~~-----~~d   65 (292)
T 1vl0_A           11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQ--------------------DLDITNVLAVNKFFNEK-----KPN   65 (292)
T ss_dssp             -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTT--------------------TCCTTCHHHHHHHHHHH-----CCS
T ss_pred             ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCc--------------------cCCCCCHHHHHHHHHhc-----CCC
Confidence            46899999999999999999999999998888875                    37999999998888755     799


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-----------CC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-----------KR  162 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-----------~~  162 (264)
                      +|||+||....      +.+.+++++.+++|+.++.++++++.+    .+ . ++|++||.....+.           .+
T Consensus        66 ~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~----~~-~-~iv~~SS~~v~~~~~~~~~~E~~~~~~  133 (292)
T 1vl0_A           66 VVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYS----VG-A-EIVQISTDYVFDGEAKEPITEFDEVNP  133 (292)
T ss_dssp             EEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHH----HT-C-EEEEEEEGGGSCSCCSSCBCTTSCCCC
T ss_pred             EEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEechHHeECCCCCCCCCCCCCCCC
Confidence            99999996432      123467889999999999999999865    23 3 99999998654332           24


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC------CCCCCCCChHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT------PLEGVVLRAGHVA  236 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~edva  236 (264)
                      ...|+.+|.+.+.+++.++.       .+..+.|+.+.++ ....    ............      .....++.++|+|
T Consensus       134 ~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva  201 (292)
T 1vl0_A          134 QSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD-GNNF----VKTMINLGKTHDELKVVHDQVGTPTSTVDLA  201 (292)
T ss_dssp             CSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS-SSCH----HHHHHHHHHHCSEEEEESSCEECCEEHHHHH
T ss_pred             ccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC-CcCh----HHHHHHHHhcCCcEEeecCeeeCCccHHHHH
Confidence            67899999999999987643       3667778777655 1110    111111111000      0114577899999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCeee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +++++++...    .|+.+++++|..
T Consensus       202 ~~~~~~~~~~----~~~~~~i~~~~~  223 (292)
T 1vl0_A          202 RVVLKVIDEK----NYGTFHCTCKGI  223 (292)
T ss_dssp             HHHHHHHHHT----CCEEEECCCBSC
T ss_pred             HHHHHHHhcC----CCcEEEecCCCC
Confidence            9999999653    688999998753

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.85  E-value=1e-20  Score=175.04  Aligned_cols=222  Identities=12%  Similarity=0.098  Sum_probs=159.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHH-HHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ-VKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~   90 (264)
                      ++++++|||||+|+||.+++++|+++ |++|+++.|+..+..+    .....++.++.+|++|.++ +.++++       
T Consensus       313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~----~~~~~~v~~v~~Dl~d~~~~~~~~~~-------  381 (660)
T 1z7e_A          313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHVK-------  381 (660)
T ss_dssp             -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGG----GTTCTTEEEEECCTTTCHHHHHHHHH-------
T ss_pred             ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhh----hccCCceEEEECCCCCcHHHHHHhhc-------
Confidence            57899999999999999999999998 8999888887654321    1123468899999998754 555554       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC----------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG----------  160 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~----------  160 (264)
                      ++|+|||+||.....      ...+++++.+++|+.++.++++++.+    .+  +++|++||.......          
T Consensus       382 ~~D~Vih~Aa~~~~~------~~~~~~~~~~~~Nv~gt~~ll~aa~~----~~--~r~V~~SS~~vyg~~~~~~~~E~~~  449 (660)
T 1z7e_A          382 KCDVVLPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCVK----YR--KRIIFPSTSEVYGMCSDKYFDEDHS  449 (660)
T ss_dssp             HCSEEEECCCCCCTH------HHHHSHHHHHHHHTHHHHHHHHHHHH----TT--CEEEEECCGGGGBTCCSSSBCTTTC
T ss_pred             CCCEEEECceecCcc------ccccCHHHHHHhhhHHHHHHHHHHHH----hC--CEEEEEecHHHcCCCCCcccCCCcc
Confidence            589999999975431      12346788999999999998888754    22  699999997654221          


Q ss_pred             --------CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc----c--CCChHHHHhhcCCCCC--
Q 041914          161 --------KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA----Y--GMPADEVEKLFEPQTP--  224 (264)
Q Consensus       161 --------~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~----~--~~~~~~~~~~~~~~~~--  224 (264)
                              .+...|+.+|.+.+.+++.++.++   |++++.+.||.+.++.....    .  ......+........+  
T Consensus       450 ~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  526 (660)
T 1z7e_A          450 NLIVGPVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIK  526 (660)
T ss_dssp             CEEECCTTCTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEE
T ss_pred             ccccCcccCCCCCcHHHHHHHHHHHHHHHHHc---CCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcE
Confidence                    223479999999999999998775   89999999999988764210    0  0001111111111111  


Q ss_pred             ------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          225 ------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       225 ------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                            ....+++++|+|++++.++.......+|+.|++++|
T Consensus       527 ~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~  568 (660)
T 1z7e_A          527 LIDGGKQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNP  568 (660)
T ss_dssp             EEGGGCCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCG
T ss_pred             EeCCCCeEEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCC
Confidence                  113477899999999999875544567899999987

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.85  E-value=1.2e-20  Score=156.05  Aligned_cols=193  Identities=18%  Similarity=0.129  Sum_probs=138.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||++++++|++ |++|+++.|+....         . .   +.+|++|.+++.++++..     ++|+||
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~---------~-~---~~~Dl~~~~~~~~~~~~~-----~~d~vi   62 (273)
T 2ggs_A            2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ---------G-G---YKLDLTDFPRLEDFIIKK-----RPDVII   62 (273)
T ss_dssp             CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT---------T-C---EECCTTSHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC---------C-C---ceeccCCHHHHHHHHHhc-----CCCEEE
Confidence            589999999999999999995 89999888876421         1 2   889999999999988765     699999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC----------CCchh
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK----------RRTDY  166 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~----------~~~~y  166 (264)
                      ||||.....      .+.+++++.+++|+.++.++++++.+    .+  +++|++||.....+.+          +...|
T Consensus        63 ~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y  130 (273)
T 2ggs_A           63 NAAAMTDVD------KCEIEKEKAYKINAEAVRHIVRAGKV----ID--SYIVHISTDYVFDGEKGNYKEEDIPNPINYY  130 (273)
T ss_dssp             ECCCCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH----TT--CEEEEEEEGGGSCSSSCSBCTTSCCCCSSHH
T ss_pred             ECCcccChh------hhhhCHHHHHHHhHHHHHHHHHHHHH----hC--CeEEEEecceeEcCCCCCcCCCCCCCCCCHH
Confidence            999975321      23567899999999999999999854    23  5999999998764432          36789


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC-----CCCCCChHHHHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL-----EGVVLRAGHVADAVLF  241 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~edva~~~~~  241 (264)
                      +.+|++.+.+++.    +....||++.+. |  .+++.        ...........+.     ...+++++|+|+++++
T Consensus       131 ~~sK~~~e~~~~~----~~~~~iR~~~v~-G--~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~  195 (273)
T 2ggs_A          131 GLSKLLGETFALQ----DDSLIIRTSGIF-R--NKGFP--------IYVYKTLKEGKTVFAFKGYYSPISARKLASAILE  195 (273)
T ss_dssp             HHHHHHHHHHHCC----TTCEEEEECCCB-S--SSSHH--------HHHHHHHHTTCCEEEESCEECCCBHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhC----CCeEEEeccccc-c--ccHHH--------HHHHHHHHcCCCEEeecCCCCceEHHHHHHHHHH
Confidence            9999999999877    222234444443 2  12221        1111111111110     2568899999999999


Q ss_pred             HhCCCCCCeeccEEEecC
Q 041914          242 LACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dg  259 (264)
                      ++.+.   .+| .+++++
T Consensus       196 ~~~~~---~~g-~~~i~~  209 (273)
T 2ggs_A          196 LLELR---KTG-IIHVAG  209 (273)
T ss_dssp             HHHHT---CCE-EEECCC
T ss_pred             HHhcC---cCC-eEEECC
Confidence            99654   245 788887

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.85  E-value=2.9e-20  Score=157.00  Aligned_cols=214  Identities=17%  Similarity=0.193  Sum_probs=151.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADH--GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|+||++++++|+++  |++|+++.|+..+..          .+.++.+|++|.+++.+++++.     ++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~~-----~~d~   65 (317)
T 3ajr_A            1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEKY-----SIDA   65 (317)
T ss_dssp             CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHHT-----TCCE
T ss_pred             CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhhc-----CCcE
Confidence            4899999999999999999999  899888887654321          3467899999999988887642     7999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC------------CC
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG------------KR  162 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~------------~~  162 (264)
                      |||+|+....       ...+++++.+++|+.++.++++++.+    .+ .+++|++||.....+.            .+
T Consensus        66 vih~a~~~~~-------~~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p  133 (317)
T 3ajr_A           66 IFHLAGILSA-------KGEKDPALAYKVNMNGTYNILEAAKQ----HR-VEKVVIPSTIGVFGPETPKNKVPSITITRP  133 (317)
T ss_dssp             EEECCCCCHH-------HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEEEEGGGCCTTSCSSSBCSSSCCCC
T ss_pred             EEECCcccCC-------ccccChHHHhhhhhHHHHHHHHHHHH----cC-CCEEEEecCHHHhCCCCCCCCccccccCCC
Confidence            9999996432       12356788999999999999998753    33 5699999998765432            24


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-C--hHHHHhhcCCCC-------CCCCCCCCh
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-P--ADEVEKLFEPQT-------PLEGVVLRA  232 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~--~~~~~~~~~~~~-------~~~~~~~~~  232 (264)
                      ...|+.+|.+.+.+++.++.++   |++++.+.|+.+..+........ .  ...+........       .....++.+
T Consensus       134 ~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v  210 (317)
T 3ajr_A          134 RTMFGVTKIAAELLGQYYYEKF---GLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYM  210 (317)
T ss_dssp             CSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEH
T ss_pred             CchHHHHHHHHHHHHHHHHHhc---CCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEH
Confidence            6789999999999999887764   79999998766554321110000 0  011111111110       011335688


Q ss_pred             HHHHHHHHHHhCCCC-CCeeccEEEecCe
Q 041914          233 GHVADAVLFLACRDS-EFVTGHDLVVDGG  260 (264)
Q Consensus       233 edva~~~~~l~s~~~-~~~~G~~i~~dgG  260 (264)
                      +|++++++.++.... ...+|+.++++|+
T Consensus       211 ~Dva~a~~~~l~~~~~~~~~g~~~~i~~~  239 (317)
T 3ajr_A          211 PDALKALVDLYEADRDKLVLRNGYNVTAY  239 (317)
T ss_dssp             HHHHHHHHHHHHCCGGGCSSCSCEECCSE
T ss_pred             HHHHHHHHHHHhCCccccccCceEecCCc
Confidence            999999998875432 2345788998864

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.85  E-value=9.4e-21  Score=159.42  Aligned_cols=217  Identities=16%  Similarity=0.147  Sum_probs=152.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADHG-ARMIVIADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|+||++++++|+++| ++|+++.|..... ...+.      .+. +.+|++|.+.+.++++...  ++++|+
T Consensus         1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~------~~~-~~~d~~~~~~~~~~~~~~~--~~~~d~   71 (310)
T 1eq2_A            1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV------DLN-IADYMDKEDFLIQIMAGEE--FGDVEA   71 (310)
T ss_dssp             CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH------TSC-CSEEEEHHHHHHHHHTTCC--CSSCCE
T ss_pred             CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC------cce-eccccccHHHHHHHHhccc--cCCCcE
Confidence            48999999999999999999999 8988888775542 12221      112 6789998888777665110  136999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-----------CCC
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-----------KRR  163 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-----------~~~  163 (264)
                      |||+|+....        +.+++++.+++|+.++.++++++.+    .+ . ++|++||.....+.           .+.
T Consensus        72 vi~~a~~~~~--------~~~~~~~~~~~n~~~~~~l~~a~~~----~~-~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~  137 (310)
T 1eq2_A           72 IFHEGACSST--------TEWDGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIESREYEKPL  137 (310)
T ss_dssp             EEECCSCCCT--------TCCCHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCCS
T ss_pred             EEECcccccC--------cccCHHHHHHHHHHHHHHHHHHHHH----cC-C-eEEEEeeHHHhCCCCCCCCCCCCCCCCC
Confidence            9999997543        1124688999999999999998854    24 4 99999998654322           236


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc--CCChHHHHhhcCCCC--------CC-CCCCCCh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY--GMPADEVEKLFEPQT--------PL-EGVVLRA  232 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~--~~~~~~~~~~~~~~~--------~~-~~~~~~~  232 (264)
                      ..|+.+|.+.+.+++.++.+   .|++++.+.||.+.++......  ...............        .. ...++.+
T Consensus       138 ~~Y~~sK~~~e~~~~~~~~~---~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v  214 (310)
T 1eq2_A          138 NVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYV  214 (310)
T ss_dssp             SHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEH
T ss_pred             ChhHHHHHHHHHHHHHHHHH---cCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEH
Confidence            68999999999999998766   4899999999999887542100  001111111111000        01 2456889


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +|+|++++.++....    |+.+++.+|..+
T Consensus       215 ~Dva~~~~~~~~~~~----~~~~~i~~~~~~  241 (310)
T 1eq2_A          215 GDVADVNLWFLENGV----SGIFNLGTGRAE  241 (310)
T ss_dssp             HHHHHHHHHHHHHCC----CEEEEESCSCCB
T ss_pred             HHHHHHHHHHHhcCC----CCeEEEeCCCcc
Confidence            999999999986443    789999887543

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.84  E-value=3.3e-20  Score=154.56  Aligned_cols=200  Identities=12%  Similarity=0.043  Sum_probs=144.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADH--GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |++|||||+|+||++++++|+++  |++|+++.|+..+... +..    ..+.++.+|++|.+++.++++       ++|
T Consensus         1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-l~~----~~~~~~~~D~~d~~~l~~~~~-------~~d   68 (287)
T 2jl1_A            1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAST-LAD----QGVEVRHGDYNQPESLQKAFA-------GVS   68 (287)
T ss_dssp             CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHH-HHH----TTCEEEECCTTCHHHHHHHTT-------TCS
T ss_pred             CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhH-Hhh----cCCeEEEeccCCHHHHHHHHh-------cCC
Confidence            46999999999999999999999  9999999987654422 211    256789999999988887765       689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      ++||+++..  .       . +      ++|+.++.++++++.    +.+ .+++|++||.....   ....|+.+|.+.
T Consensus        69 ~vi~~a~~~--~-------~-~------~~n~~~~~~l~~a~~----~~~-~~~~v~~Ss~~~~~---~~~~y~~~K~~~  124 (287)
T 2jl1_A           69 KLLFISGPH--Y-------D-N------TLLIVQHANVVKAAR----DAG-VKHIAYTGYAFAEE---SIIPLAHVHLAT  124 (287)
T ss_dssp             EEEECCCCC--S-------C-H------HHHHHHHHHHHHHHH----HTT-CSEEEEEEETTGGG---CCSTHHHHHHHH
T ss_pred             EEEEcCCCC--c-------C-c------hHHHHHHHHHHHHHH----HcC-CCEEEEECCCCCCC---CCCchHHHHHHH
Confidence            999999852  1       1 1      578888888777763    344 56999999987642   224799999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHh--hcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK--LFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      +.+++.       .|++++.+.||.+.++......   ......  ...........+++++|+|++++.++...  ..+
T Consensus       125 E~~~~~-------~~~~~~ilrp~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~--~~~  192 (287)
T 2jl1_A          125 EYAIRT-------TNIPYTFLRNALYTDFFVNEGL---RASTESGAIVTNAGSGIVNSVTRNELALAAATVLTEE--GHE  192 (287)
T ss_dssp             HHHHHH-------TTCCEEEEEECCBHHHHSSGGG---HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHTSS--SCT
T ss_pred             HHHHHH-------cCCCeEEEECCEeccccchhhH---HHHhhCCceeccCCCCccCccCHHHHHHHHHHHhcCC--CCC
Confidence            988753       5899999999988776421111   111111  11111111246889999999999998643  247


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |+.+++++|..+
T Consensus       193 g~~~~i~~~~~~  204 (287)
T 2jl1_A          193 NKTYNLVSNQPW  204 (287)
T ss_dssp             TEEEEECCSSCB
T ss_pred             CcEEEecCCCcC
Confidence            899999988543

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.84  E-value=1.3e-20  Score=159.45  Aligned_cols=210  Identities=15%  Similarity=0.107  Sum_probs=150.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++++|||||+|+||++++++|+++|++|+++.|+.                   .+|++|.+++.+++++.     ++|+
T Consensus         3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~-------------------~~D~~d~~~~~~~~~~~-----~~d~   58 (321)
T 1e6u_A            3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASE-----RIDQ   58 (321)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc-------------------cCCccCHHHHHHHHHhc-----CCCE
Confidence            57899999999999999999999999977766542                   26999999988887754     7999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---------------  159 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---------------  159 (264)
                      |||+|+.....     ....+++++.+++|+.++.++++++..    .+ .+++|++||......               
T Consensus        59 vih~a~~~~~~-----~~~~~~~~~~~~~n~~~~~~l~~~~~~----~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~  128 (321)
T 1e6u_A           59 VYLAAAKVGGI-----VANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELLQGT  128 (321)
T ss_dssp             EEECCCCCCCH-----HHHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             EEEcCeecCCc-----chhhhCHHHHHHHHHHHHHHHHHHHHH----hC-CCeEEEEccHHHcCCCCCCCcCccccccCC
Confidence            99999965321     123445678999999999999988754    33 469999999876421               


Q ss_pred             C-CCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhc-------------CCCC
Q 041914          160 G-KRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLF-------------EPQT  223 (264)
Q Consensus       160 ~-~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~-------------~~~~  223 (264)
                      . |....|+.+|.+.+.+++.++.++   +++++.+.|+.+.++.......  .....+...+             ....
T Consensus       129 ~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g  205 (321)
T 1e6u_A          129 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  205 (321)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             CCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCC
Confidence            1 113589999999999999998775   7999999999998875431100  0011111111             0011


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCC------CeeccEEEecCee
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSE------FVTGHDLVVDGGF  261 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~------~~~G~~i~~dgG~  261 (264)
                      .....++.++|+|++++.++.....      ...|+.+++.+|.
T Consensus       206 ~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~  249 (321)
T 1e6u_A          206 TPMREFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGV  249 (321)
T ss_dssp             CCEECEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSC
T ss_pred             CEEEEeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCC
Confidence            1113567999999999998854321      1236888887764

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.84  E-value=3.7e-20  Score=165.12  Aligned_cols=226  Identities=16%  Similarity=0.176  Sum_probs=156.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHc---CCcEEEEecCchhhH--HHHHhhhCC--------------CcEEEEEec
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADH---GARMIVIADIQDELG--RQVATSIGV--------------GKCHYVHCD   71 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~---g~~v~~~~~~~~~~~--~~~~~~~~~--------------~~~~~~~~D   71 (264)
                      ...++|+||||||+|+||.+++++|++.   |++|+++.|+.....  +.+.+....              .++.++.+|
T Consensus        69 ~~~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~D  148 (478)
T 4dqv_A           69 PSPELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGD  148 (478)
T ss_dssp             CCSCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred             CCCCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeE
Confidence            3467899999999999999999999999   999999998765431  222222221              479999999


Q ss_pred             CC------CHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCC
Q 041914           72 VT------NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVR  145 (264)
Q Consensus        72 ~s------~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~  145 (264)
                      ++      |.+.+.++++       ++|+|||||+....          +.+++.+++|+.++.++++.+.    +.+ .
T Consensus       149 l~~~~~gld~~~~~~~~~-------~~D~Vih~Aa~~~~----------~~~~~~~~~Nv~gt~~ll~aa~----~~~-~  206 (478)
T 4dqv_A          149 KSEPDLGLDQPMWRRLAE-------TVDLIVDSAAMVNA----------FPYHELFGPNVAGTAELIRIAL----TTK-L  206 (478)
T ss_dssp             TTSGGGGCCHHHHHHHHH-------HCCEEEECCSSCSB----------SSCCEEHHHHHHHHHHHHHHHT----SSS-C
T ss_pred             CCCcccCCCHHHHHHHHc-------CCCEEEECccccCC----------cCHHHHHHHHHHHHHHHHHHHH----hCC-C
Confidence            98      5666766665       68999999997643          1345678999999999988764    333 4


Q ss_pred             cEEEEecCCCCCCCCC----------------------CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcc
Q 041914          146 GSIVCTASVAGSCGGK----------------------RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPL  203 (264)
Q Consensus       146 ~~iv~iss~~~~~~~~----------------------~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  203 (264)
                      .++|++||........                      ....|+.+|.+.+.+++.++.+.   |++++++.||.+.++.
T Consensus       207 ~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~~  283 (478)
T 4dqv_A          207 KPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILADT  283 (478)
T ss_dssp             CCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECCS
T ss_pred             CeEEEEeehhhcCccCCCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCCC
Confidence            6899999976533211                      11449999999999999998764   7999999999998763


Q ss_pred             cccc-cCCC--hHHHHhh-----cCCCC-----------CCCCCCCChHHHHHHHHHHhCCC--CCCeeccEEEecCee
Q 041914          204 TCHA-YGMP--ADEVEKL-----FEPQT-----------PLEGVVLRAGHVADAVLFLACRD--SEFVTGHDLVVDGGF  261 (264)
Q Consensus       204 ~~~~-~~~~--~~~~~~~-----~~~~~-----------~~~~~~~~~edva~~~~~l~s~~--~~~~~G~~i~~dgG~  261 (264)
                      .... ....  .......     ..+..           .....++.++|+|++++.++...  .....|++|++.++.
T Consensus       284 ~~~g~~~~~~~~~~l~~~~~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~  362 (478)
T 4dqv_A          284 SYAGQLNMSDWVTRMVLSLMATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPH  362 (478)
T ss_dssp             SSSSCCCTTBHHHHHHHHHHHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCC
T ss_pred             ccCCcCCHHHHHHHHHHHHHHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCC
Confidence            2110 0000  0111110     00010           01124578999999999987531  134467899998764

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.84  E-value=6.1e-20  Score=170.97  Aligned_cols=234  Identities=11%  Similarity=0.071  Sum_probs=156.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH---HHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR---QVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.++.+|++|||||+|+||++++++|+++|++|+++.|+.....+   .+... ...++.++.+|++|.+++.+++++. 
T Consensus         6 ~~~~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~-~~~~v~~v~~Dl~d~~~l~~~~~~~-   83 (699)
T 1z45_A            6 QSESTSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL-TKHHIPFYEVDLCDRKGLEKVFKEY-   83 (699)
T ss_dssp             -----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH-HTSCCCEEECCTTCHHHHHHHHHHS-
T ss_pred             ccccCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc-cCCceEEEEcCCCCHHHHHHHHHhC-
Confidence            345778999999999999999999999999999888876543221   22111 1235778999999999988887643 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------  158 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------  158 (264)
                          ++|+|||+|+.....  .    ..+..++.+++|+.++.++++++.    +.+ .++||++||.....        
T Consensus        84 ----~~D~Vih~A~~~~~~--~----~~~~~~~~~~~Nv~gt~~ll~a~~----~~~-~~~iV~~SS~~vyg~~~~~~~~  148 (699)
T 1z45_A           84 ----KIDSVIHFAGLKAVG--E----STQIPLRYYHNNILGTVVLLELMQ----QYN-VSKFVFSSSATVYGDATRFPNM  148 (699)
T ss_dssp             ----CCCEEEECCSCCCHH--H----HHHSHHHHHHHHHHHHHHHHHHHH----HHT-CCEEEEEEEGGGGCCGGGSTTC
T ss_pred             ----CCCEEEECCcccCcC--c----cccCHHHHHHHHHHHHHHHHHHHH----HcC-CCEEEEECcHHHhCCCcccccc
Confidence                799999999975321  1    123346789999999999887654    333 57999999986532        


Q ss_pred             -------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--------CChHHHHhhcCC--
Q 041914          159 -------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--------MPADEVEKLFEP--  221 (264)
Q Consensus       159 -------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~~~~~~--  221 (264)
                             +..+...|+.+|++.+.+++.++.++ ..++++..+.|+.+..+......+        ............  
T Consensus       149 ~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~  227 (699)
T 1z45_A          149 IPIPEECPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRR  227 (699)
T ss_dssp             CSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSS
T ss_pred             CCccccCCCCCCChHHHHHHHHHHHHHHHHHhc-cCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCC
Confidence                   12245789999999999999998775 358999999998776653211110        001112221111  


Q ss_pred             -CCCC------------CCCCCChHHHHHHHHHHhCCC----CCCeeccEEEecCee
Q 041914          222 -QTPL------------EGVVLRAGHVADAVLFLACRD----SEFVTGHDLVVDGGF  261 (264)
Q Consensus       222 -~~~~------------~~~~~~~edva~~~~~l~s~~----~~~~~G~~i~~dgG~  261 (264)
                       ..+.            ...++.++|+|++++.++...    ...-.|+.+++.+|.
T Consensus       228 ~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~  284 (699)
T 1z45_A          228 EKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGK  284 (699)
T ss_dssp             SCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSC
T ss_pred             CceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCC
Confidence             1110            123678899999998877421    112346788887764

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=99.84  E-value=1e-21  Score=166.06  Aligned_cols=213  Identities=15%  Similarity=0.068  Sum_probs=143.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh---hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++.++++|||||+|+||.+++++|+++|++|+++.|....   ....+........+.++.+|++               
T Consensus         4 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~---------------   68 (321)
T 3vps_A            4 NTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEERDLS---------------   68 (321)
T ss_dssp             ---CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTSSEEECSCGGGCCHHHHT---------------
T ss_pred             ccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhhhhhccCCCeeEEeCccc---------------
Confidence            4567999999999999999999999999999999887652   1111111111123445555555               


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---------  159 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---------  159 (264)
                        ++|+|||+|+.....  ...    ++....++ |+.++.++++++..    .+ ..++|++||......         
T Consensus        69 --~~d~vi~~a~~~~~~--~~~----~~~~~~~~-n~~~~~~ll~a~~~----~~-v~~~v~~SS~~v~~~~~~~~~~E~  134 (321)
T 3vps_A           69 --DVRLVYHLASHKSVP--RSF----KQPLDYLD-NVDSGRHLLALCTS----VG-VPKVVVGSTCEVYGQADTLPTPED  134 (321)
T ss_dssp             --TEEEEEECCCCCCHH--HHT----TSTTTTHH-HHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCSCSSSSBCTT
T ss_pred             --cCCEEEECCccCChH--HHH----hCHHHHHH-HHHHHHHHHHHHHH----cC-CCeEEEecCHHHhCCCCCCCCCCC
Confidence              799999999976431  011    11233455 99999888888744    23 469999999865432         


Q ss_pred             --CCCCchhhchHHHHHHHHHHHHHHhCcCCc-eEEEeeCCcccCcccccccCCChHHHHhhcC--------CCCCCCCC
Q 041914          160 --GKRRTDYHMSKHAVIGLVRSASVQLGVHGI-RVNCVSPHGLATPLTCHAYGMPADEVEKLFE--------PQTPLEGV  228 (264)
Q Consensus       160 --~~~~~~y~~sK~al~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~--------~~~~~~~~  228 (264)
                        ..+...|+.+|.+.+.+++.++.+   .++ +++.+.|+.+.++.....  .....+.....        ........
T Consensus       135 ~~~~p~~~Y~~sK~~~E~~~~~~~~~---~~~~~~~ilRp~~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (321)
T 3vps_A          135 SPLSPRSPYAASKVGLEMVAGAHQRA---SVAPEVGIVRFFNVYGPGERPD--ALVPRLCANLLTRNELPVEGDGEQRRD  209 (321)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHS---SSSCEEEEEEECEEECTTCCTT--SHHHHHHHHHHHHSEEEEETTSCCEEC
T ss_pred             CCCCCCChhHHHHHHHHHHHHHHHHH---cCCCceEEEEeccccCcCCCCC--ChHHHHHHHHHcCCCeEEeCCCCceEc
Confidence              234678999999999999998876   478 999999999988754320  00111111111        00111135


Q ss_pred             CCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          229 VLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       229 ~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      ++.++|+|++++.++.....   | .+++.+|..
T Consensus       210 ~v~v~Dva~~~~~~~~~~~~---g-~~~i~~~~~  239 (321)
T 3vps_A          210 FTYITDVVDKLVALANRPLP---S-VVNFGSGQS  239 (321)
T ss_dssp             EEEHHHHHHHHHHGGGSCCC---S-EEEESCSCC
T ss_pred             eEEHHHHHHHHHHHHhcCCC---C-eEEecCCCc
Confidence            67999999999999976533   7 999998754

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.83  E-value=2.2e-20  Score=155.70  Aligned_cols=194  Identities=16%  Similarity=0.055  Sum_probs=144.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||++++++|.++|++|+++.|.                    ++|++|.+++.+++++.     ++|++|
T Consensus         7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~--------------------~~D~~d~~~~~~~~~~~-----~~d~vi   61 (287)
T 3sc6_A            7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKK--------------------LLDITNISQVQQVVQEI-----RPHIII   61 (287)
T ss_dssp             EEEEESTTSHHHHHHHHHSCTTTEEEEEECTT--------------------TSCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeccc--------------------ccCCCCHHHHHHHHHhc-----CCCEEE
Confidence            89999999999999999999999998888882                    37999999999888866     799999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      |+|+.....      ...+++++.+++|+.++.++++++.+    .+  .++|++||.....+           ..+...
T Consensus        62 ~~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~~~~~----~~--~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  129 (287)
T 3sc6_A           62 HCAAYTKVD------QAEKERDLAYVINAIGARNVAVASQL----VG--AKLVYISTDYVFQGDRPEGYDEFHNPAPINI  129 (287)
T ss_dssp             ECCCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHHH----HT--CEEEEEEEGGGSCCCCSSCBCTTSCCCCCSH
T ss_pred             ECCcccChH------HHhcCHHHHHHHHHHHHHHHHHHHHH----cC--CeEEEEchhhhcCCCCCCCCCCCCCCCCCCH
Confidence            999976432      11246788999999999999998854    23  38999999865522           234678


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC------CCCCCCChHHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP------LEGVVLRAGHVADAV  239 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~edva~~~  239 (264)
                      |+.+|.+.+.+++.++.       ++..+.|+.+.++.....    ............+      ....++.++|+|+++
T Consensus       130 Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  198 (287)
T 3sc6_A          130 YGASKYAGEQFVKELHN-------KYFIVRTSWLYGKYGNNF----VKTMIRLGKEREEISVVADQIGSPTYVADLNVMI  198 (287)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCH----HHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCCCCcH----HHHHHHHHHcCCCeEeecCcccCceEHHHHHHHH
Confidence            99999999999987653       457889998877643211    1222222211111      113567799999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +.++....    ++.+++.+|..
T Consensus       199 ~~~~~~~~----~~~~~i~~~~~  217 (287)
T 3sc6_A          199 NKLIHTSL----YGTYHVSNTGS  217 (287)
T ss_dssp             HHHHTSCC----CEEEECCCBSC
T ss_pred             HHHHhCCC----CCeEEEcCCCc
Confidence            99997543    56899988753

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.83  E-value=5.5e-21  Score=161.02  Aligned_cols=215  Identities=15%  Similarity=0.078  Sum_probs=148.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.++++|||||+|+||++++++|.++|+      +...          ....+.++.+|++|.+++.++++..     +
T Consensus         3 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~----------~~~~~~~~~~D~~d~~~~~~~~~~~-----~   61 (319)
T 4b8w_A            3 YFQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE----------DWVFVSSKDADLTDTAQTRALFEKV-----Q   61 (319)
T ss_dssp             CCCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC----------EEEECCTTTCCTTSHHHHHHHHHHS-----C
T ss_pred             cccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc----------cccccCceecccCCHHHHHHHHhhc-----C
Confidence            46679999999999999999999999997      1100          0012334578999999998888743     6


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-------------
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-------------  158 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-------------  158 (264)
                      +|+|||+|+.....     ..+.++..+.+++|+.++.++++++.    +.+ ..++|++||.....             
T Consensus        62 ~d~Vih~A~~~~~~-----~~~~~~~~~~~~~nv~gt~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~  131 (319)
T 4b8w_A           62 PTHVIHLAAMVGGL-----FRNIKYNLDFWRKNVHMNDNVLHSAF----EVG-ARKVVSCLSTCIFPDKTTYPIDETMIH  131 (319)
T ss_dssp             CSEEEECCCCCCCH-----HHHTTCHHHHHHHHHHHHHHHHHHHH----HTT-CSEEEEECCGGGSCSSCCSSBCGGGGG
T ss_pred             CCEEEECceecccc-----cccccCHHHHHHHHHHHHHHHHHHHH----HcC-CCeEEEEcchhhcCCCCCCCccccccc
Confidence            99999999975321     01223467789999999999888874    334 46999999986542             


Q ss_pred             ---CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhh----cCCCCC-----
Q 041914          159 ---GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKL----FEPQTP-----  224 (264)
Q Consensus       159 ---~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~----~~~~~~-----  224 (264)
                         +.|....|+.+|.+.+.+++.++.+.   |+++..+.|+.+.++.......  .....+...    .....+     
T Consensus       132 ~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (319)
T 4b8w_A          132 NGPPHNSNFGYSYAKRMIDVQNRAYFQQY---GCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWG  208 (319)
T ss_dssp             BSCCCSSSHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEES
T ss_pred             cCCCCCCcchHHHHHHHHHHHHHHHHHhh---CCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeC
Confidence               12223369999999999999998875   7999999999998875421100  001111111    111110     


Q ss_pred             ---CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          225 ---LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       225 ---~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                         ....++.++|+|++++.++.... ...|++|++.+|.
T Consensus       209 ~g~~~~~~i~v~Dva~a~~~~~~~~~-~~~~~~~ni~~~~  247 (319)
T 4b8w_A          209 TGNPRRQFIYSLDLAQLFIWVLREYN-EVEPIILSVGEED  247 (319)
T ss_dssp             CSCCEECEEEHHHHHHHHHHHHHHCC-CSSCEEECCCGGG
T ss_pred             CCCeeEEEEeHHHHHHHHHHHHhccc-cCCceEEEecCCC
Confidence               11346799999999999986432 3457788887664

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.82  E-value=1e-19  Score=151.46  Aligned_cols=195  Identities=10%  Similarity=0.077  Sum_probs=135.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADH--GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|+||++++++|+++  |++|+++.|+..+... +..    ..+.++.+|++|.+++.++++       ++|+
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~----~~~~~~~~D~~d~~~~~~~~~-------~~d~   68 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQA-LAA----QGITVRQADYGDEAALTSALQ-------GVEK   68 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHH-HHH----TTCEEEECCTTCHHHHHHHTT-------TCSE
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhh-hhc----CCCeEEEcCCCCHHHHHHHHh-------CCCE
Confidence            4899999999999999999999  9999999987655422 211    256789999999988887765       6899


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      +||+++...                  ..|+.++.+++++    +++.+ .+++|++||.... +  ....|+.+|.+.+
T Consensus        69 vi~~a~~~~------------------~~~~~~~~~l~~a----~~~~~-~~~~v~~Ss~~~~-~--~~~~y~~sK~~~e  122 (286)
T 2zcu_A           69 LLLISSSEV------------------GQRAPQHRNVINA----AKAAG-VKFIAYTSLLHAD-T--SPLGLADEHIETE  122 (286)
T ss_dssp             EEECC--------------------------CHHHHHHHH----HHHHT-CCEEEEEEETTTT-T--CCSTTHHHHHHHH
T ss_pred             EEEeCCCCc------------------hHHHHHHHHHHHH----HHHcC-CCEEEEECCCCCC-C--CcchhHHHHHHHH
Confidence            999998521                  0244455444444    44444 5799999998775 2  2357999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHH-hhc-CCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE-KLF-EPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      .+++.       .+++++.+.||.+.++.....    ..... ..+ .........+++++|+|++++.++....  .+|
T Consensus       123 ~~~~~-------~~~~~~ilrp~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~--~~g  189 (286)
T 2zcu_A          123 KMLAD-------SGIVYTLLRNGWYSENYLASA----PAALEHGVFIGAAGDGKIASATRADYAAAAARVISEAG--HEG  189 (286)
T ss_dssp             HHHHH-------HCSEEEEEEECCBHHHHHTTH----HHHHHHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSS--CTT
T ss_pred             HHHHH-------cCCCeEEEeChHHhhhhHHHh----HHhhcCCceeccCCCCccccccHHHHHHHHHHHhcCCC--CCC
Confidence            98863       389999999998877643110    11111 111 1111112467899999999999986532  479


Q ss_pred             cEEEecCeee
Q 041914          253 HDLVVDGGFL  262 (264)
Q Consensus       253 ~~i~~dgG~~  262 (264)
                      +.++++||..
T Consensus       190 ~~~~i~~~~~  199 (286)
T 2zcu_A          190 KVYELAGDSA  199 (286)
T ss_dssp             CEEEECCSSC
T ss_pred             ceEEEeCCCc
Confidence            9999999853

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.82  E-value=1.9e-19  Score=161.73  Aligned_cols=219  Identities=14%  Similarity=0.063  Sum_probs=154.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH--HHHHhh-----------hCCCcEEEEEecCCCHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG--RQVATS-----------IGVGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~--~~~~~~-----------~~~~~~~~~~~D~s~~~~~~~~   81 (264)
                      .++||||||+|.||.+++++|.+.|++|+++.|...+..  +.+.+.           ....++.++.+|+++.+++.  
T Consensus       150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~--  227 (508)
T 4f6l_B          150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV--  227 (508)
T ss_dssp             CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC--
T ss_pred             CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC--
Confidence            589999999999999999999999999999998876321  111111           11247999999999977766  


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC--CC-
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG--SC-  158 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~--~~-  158 (264)
                            ...++|+|||||+....         ...++..+++|+.++.++++.+.+     . ..++|++||...  .. 
T Consensus       228 ------~~~~~D~Vih~Aa~~~~---------~~~~~~~~~~Nv~gt~~ll~~a~~-----~-~~~~v~iSS~~vG~~~~  286 (508)
T 4f6l_B          228 ------LPENMDTIIHAGARTDH---------FGDDDEFEKVNVQGTVDVIRLAQQ-----H-HARLIYVSTISVGTYFD  286 (508)
T ss_dssp             ------CSSCCSEEEECCCC-----------------CCHHHHHHHHHHHHHHHHT-----T-TCEEEEEEESCTTSEEC
T ss_pred             ------CccCCCEEEECCceecC---------CCCHHHHhhhHHHHHHHHHHHHHh-----C-CCcEEEeCChhhccCCc
Confidence                  34589999999997632         125677889999999999998754     2 469999999887  00 


Q ss_pred             ---------------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhh
Q 041914          159 ---------------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKL  218 (264)
Q Consensus       159 ---------------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~  218 (264)
                                     +..+...|+.+|.+.+.+++.++.    .|++++.+.||.+.++.........     .......
T Consensus       287 ~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~----~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~  362 (508)
T 4f6l_B          287 IDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKVLEAVN----NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMND  362 (508)
T ss_dssp             TTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHHHHHHH----TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHH
T ss_pred             cCCcCcccccccccccccCCCcHHHHHHHHHHHHHHHHH----cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHH
Confidence                           022567899999999999988653    5899999999999887543321110     1122222


Q ss_pred             cCCCC--CC-----CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          219 FEPQT--PL-----EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       219 ~~~~~--~~-----~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .....  |.     ...++.++|+|++++.++....   .|++|++.+|..+
T Consensus       363 ~~~~~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~---~~~~~nl~~~~~~  411 (508)
T 4f6l_B          363 LLQLDCIGVSMAEMPVDFSFVDTTARQIVALAQVNT---PQIIYHVLSPNKM  411 (508)
T ss_dssp             HTTCSEEETTGGGSEEECEEHHHHHHHHHHHTTBCC---SCSEEEESCSCEE
T ss_pred             HHHcCCCCCCccCceEEEEcHHHHHHHHHHHHhCCC---CCCEEEeCCCCCC
Confidence            22111  11     1236788999999999996543   7899999987643

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.82  E-value=7.9e-21  Score=158.38  Aligned_cols=204  Identities=12%  Similarity=0.056  Sum_probs=144.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++++|||| +|+||++++++|.++|++|+++.|+..+.         ...+.++.+|++|.+++.++++      +++|+
T Consensus         3 ~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~---------~~~~~~~~~Dl~d~~~~~~~~~------~~~d~   66 (286)
T 3gpi_A            3 LSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM---------PAGVQTLIADVTRPDTLASIVH------LRPEI   66 (286)
T ss_dssp             CCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC---------CTTCCEEECCTTCGGGCTTGGG------GCCSE
T ss_pred             CCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccCCceEEccCCChHHHHHhhc------CCCCE
Confidence            47899999 59999999999999999999999876542         1357889999999988877665      36999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCC
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRR  163 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~  163 (264)
                      |||+|+...           .+.+..+++|+.++.++++++.    +.+ .+++|++||...+..           ..+.
T Consensus        67 vih~a~~~~-----------~~~~~~~~~n~~~~~~ll~a~~----~~~-~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~  130 (286)
T 3gpi_A           67 LVYCVAASE-----------YSDEHYRLSYVEGLRNTLSALE----GAP-LQHVFFVSSTGVYGQEVEEWLDEDTPPIAK  130 (286)
T ss_dssp             EEECHHHHH-----------HC-----CCSHHHHHHHHHHTT----TSC-CCEEEEEEEGGGCCCCCSSEECTTSCCCCC
T ss_pred             EEEeCCCCC-----------CCHHHHHHHHHHHHHHHHHHHh----hCC-CCEEEEEcccEEEcCCCCCCCCCCCCCCCC
Confidence            999998532           3457788999999988888764    344 579999999865432           2346


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|+.+|.+.+.+ +..        ++++.+.|+.+.++...........  .... ........++.++|+|++++.++
T Consensus       131 ~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G~~~~~~~~~~~~--~~~~-~~~~~~~~~i~v~Dva~~~~~~~  198 (286)
T 3gpi_A          131 DFSGKRMLEAEAL-LAA--------YSSTILRFSGIYGPGRLRMIRQAQT--PEQW-PARNAWTNRIHRDDGAAFIAYLI  198 (286)
T ss_dssp             SHHHHHHHHHHHH-GGG--------SSEEEEEECEEEBTTBCHHHHHTTC--GGGS-CSSBCEECEEEHHHHHHHHHHHH
T ss_pred             ChhhHHHHHHHHH-Hhc--------CCeEEEecccccCCCchhHHHHHHh--cccC-CCcCceeEEEEHHHHHHHHHHHH
Confidence            7899999998887 432        7899999999987754311100000  0001 11111145778999999999998


Q ss_pred             CCCCCCeeccEEEecCeee
Q 041914          244 CRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~  262 (264)
                      ........|+.+++.+|..
T Consensus       199 ~~~~~~~~~~~~~~~~~~~  217 (286)
T 3gpi_A          199 QQRSHAVPERLYIVTDNQP  217 (286)
T ss_dssp             HHHTTSCCCSEEEECCSCC
T ss_pred             hhhccCCCCceEEEeCCCC
Confidence            6543345688999988753

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.81  E-value=2.1e-20  Score=156.59  Aligned_cols=201  Identities=15%  Similarity=0.027  Sum_probs=145.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++|||||+|+||++++++|. +|++|+++.|+..                ++.+|++|.+++.++++..     ++|++|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~~-----~~d~vi   59 (299)
T 1n2s_A            2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRKL-----RPDVIV   59 (299)
T ss_dssp             EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHhc-----CCCEEE
Confidence            69999999999999999999 8999888888651                3578999999998888754     699999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      |+|+.....      ...+++++.+++|+.++.++++++.    +.+  .++|++||...+.+           ..+...
T Consensus        60 h~a~~~~~~------~~~~~~~~~~~~n~~~~~~l~~a~~----~~~--~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~  127 (299)
T 1n2s_A           60 NAAAHTAVD------KAESEPELAQLLNATSVEAIAKAAN----ETG--AWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (299)
T ss_dssp             ECCCCCCHH------HHTTCHHHHHHHHTHHHHHHHHHHT----TTT--CEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             ECcccCCHh------hhhcCHHHHHHHHHHHHHHHHHHHH----HcC--CcEEEEecccEEeCCCCCCCCCCCCCCCccH
Confidence            999965321      1123567889999999999998873    333  38999999865432           233678


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC------CCCCCCChHHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP------LEGVVLRAGHVADAV  239 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~edva~~~  239 (264)
                      |+.+|.+.+.+++.++.       +++.+.|+.+.++.....    ............+      ....++.++|+|+++
T Consensus       128 Y~~sK~~~E~~~~~~~~-------~~~ilRp~~v~G~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~  196 (299)
T 1n2s_A          128 YGKTKLAGEKALQDNCP-------KHLIFRTSWVYAGKGNNF----AKTMLRLAKERQTLSVINDQYGAPTGAELLADCT  196 (299)
T ss_dssp             HHHHHHHHHHHHHHHCS-------SEEEEEECSEECSSSCCH----HHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCC-------CeEEEeeeeecCCCcCcH----HHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHH
Confidence            99999999999877642       788999999988753211    1111111111100      114466799999999


Q ss_pred             HHHhCCCCCCe-eccEEEecCeee
Q 041914          240 LFLACRDSEFV-TGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~-~G~~i~~dgG~~  262 (264)
                      +.++....... .|+.+++.+|..
T Consensus       197 ~~~~~~~~~~~~~~~~~~i~~~~~  220 (299)
T 1n2s_A          197 AHAIRVALNKPEVAGLYHLVAGGT  220 (299)
T ss_dssp             HHHHHHHHHCGGGCEEEECCCBSC
T ss_pred             HHHHHHhccccccCceEEEeCCCC
Confidence            99986432123 578999988753

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.79  E-value=4.5e-19  Score=148.64  Aligned_cols=208  Identities=15%  Similarity=0.122  Sum_probs=138.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhH-HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELG-RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|++|||||+|+||++++++|+++| ++|+++.|+..+.. +.+..    ..+.++.+|++|++++.++++       ++
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~----~~~~~~~~D~~d~~~l~~~~~-------~~   73 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRL----QGAEVVQGDQDDQVIMELALN-------GA   73 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-------TC
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHH----CCCEEEEecCCCHHHHHHHHh-------cC
Confidence            4899999999999999999999999 99999998765432 11111    257789999999999888775       68


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--CCCCCchhhchH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--GGKRRTDYHMSK  170 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--~~~~~~~y~~sK  170 (264)
                      |++||+++.....              ..+.|+.+    ++.+++.+++.+ .++||++|+.....  +..+...|+.+|
T Consensus        74 d~vi~~a~~~~~~--------------~~~~~~~~----~~~~~~aa~~~g-v~~iv~~S~~~~~~~~~~~~~~~y~~sK  134 (299)
T 2wm3_A           74 YATFIVTNYWESC--------------SQEQEVKQ----GKLLADLARRLG-LHYVVYSGLENIKKLTAGRLAAAHFDGK  134 (299)
T ss_dssp             SEEEECCCHHHHT--------------CHHHHHHH----HHHHHHHHHHHT-CSEEEECCCCCHHHHTTTSCCCHHHHHH
T ss_pred             CEEEEeCCCCccc--------------cchHHHHH----HHHHHHHHHHcC-CCEEEEEcCccccccCCCcccCchhhHH
Confidence            9999999853210              12234443    455555556555 57999966644221  122356799999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHH--hhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE--KLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      .+++.+.+.       .|++++.+.||.+.+++.............  ....+.......+++++|+|++++.++.... 
T Consensus       135 ~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-  206 (299)
T 2wm3_A          135 GEVEEYFRD-------IGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPE-  206 (299)
T ss_dssp             HHHHHHHHH-------HTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHH-
T ss_pred             HHHHHHHHH-------CCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChh-
Confidence            999988764       389999999999988764321110000000  0000101111346799999999999986422 


Q ss_pred             CeeccEEEecCe
Q 041914          249 FVTGHDLVVDGG  260 (264)
Q Consensus       249 ~~~G~~i~~dgG  260 (264)
                      ...|+.+.++|.
T Consensus       207 ~~~g~~~~~~g~  218 (299)
T 2wm3_A          207 KYVGQNIGLSTC  218 (299)
T ss_dssp             HHTTCEEECCSE
T ss_pred             hhCCeEEEeeec
Confidence            236889998864

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=99.79  E-value=6.1e-18  Score=140.99  Aligned_cols=197  Identities=15%  Similarity=0.154  Sum_probs=133.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++|||||+|+||++++++|.+. |++|+++.|+.++...     .....+.++.+|++|++++.++++       ++|+|
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~-----~~~~~v~~~~~D~~d~~~l~~~~~-------~~d~v   69 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPD-----DWRGKVSVRQLDYFNQESMVEAFK-------GMDTV   69 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCG-----GGBTTBEEEECCTTCHHHHHHHTT-------TCSEE
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHH-----hhhCCCEEEEcCCCCHHHHHHHHh-------CCCEE
Confidence            5899999999999999999998 9999999998765321     112368899999999998887775       78999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHH
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIG  175 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~  175 (264)
                      ||+++.....                ..|+.++    +.+++.+++.+ .++||++||.......+    |..++..   
T Consensus        70 i~~a~~~~~~----------------~~~~~~~----~~l~~aa~~~g-v~~iv~~Ss~~~~~~~~----~~~~~~~---  121 (289)
T 3e48_A           70 VFIPSIIHPS----------------FKRIPEV----ENLVYAAKQSG-VAHIIFIGYYADQHNNP----FHMSPYF---  121 (289)
T ss_dssp             EECCCCCCSH----------------HHHHHHH----HHHHHHHHHTT-CCEEEEEEESCCSTTCC----STTHHHH---
T ss_pred             EEeCCCCccc----------------hhhHHHH----HHHHHHHHHcC-CCEEEEEcccCCCCCCC----CccchhH---
Confidence            9999864321                1144443    45555566665 57999999976543322    3434322   


Q ss_pred             HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC---CCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          176 LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL---EGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       176 ~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                        ..+...++..|++++.+.||.+.+++....     ...........+.   ...+++++|+|++++.++......  |
T Consensus       122 --~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~--g  192 (289)
T 3e48_A          122 --GYASRLLSTSGIDYTYVRMAMYMDPLKPYL-----PELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTW--G  192 (289)
T ss_dssp             --HHHHHHHHHHCCEEEEEEECEESTTHHHHH-----HHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGT--T
T ss_pred             --HHHHHHHHHcCCCEEEEeccccccccHHHH-----HHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcC--C
Confidence              122333445689999999999988754211     1111111111121   122789999999999999765433  8


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      +.++++ |..+
T Consensus       193 ~~~~~~-~~~~  202 (289)
T 3e48_A          193 KRYLLS-GYSY  202 (289)
T ss_dssp             CEEEEC-CEEE
T ss_pred             ceEEeC-CCcC
Confidence            999999 6543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=99.79  E-value=4.6e-18  Score=145.87  Aligned_cols=209  Identities=16%  Similarity=0.126  Sum_probs=138.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH-HHHHhhhCCCcEEEEEec-CCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-RQVATSIGVGKCHYVHCD-VTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D-~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .++++|||||+|+||++++++|+++|++|+++.|+.++.. +.+.   ....+.++.+| ++|.+++.++++       +
T Consensus         4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~---~~~~v~~v~~D~l~d~~~l~~~~~-------~   73 (352)
T 1xgk_A            4 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ---AIPNVTLFQGPLLNNVPLMDTLFE-------G   73 (352)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH---TSTTEEEEESCCTTCHHHHHHHHT-------T
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh---hcCCcEEEECCccCCHHHHHHHHh-------c
Confidence            3678999999999999999999999999999888766532 1121   12357889999 999999888765       6


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC-CCCCCCCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA-GSCGGKRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~-~~~~~~~~~~y~~sK  170 (264)
                      +|++|||++....                 +.|..+     +.+++.+++.+..+++|++||.. ...+.+....|+.+|
T Consensus        74 ~d~Vi~~a~~~~~-----------------~~~~~~-----~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK  131 (352)
T 1xgk_A           74 AHLAFINTTSQAG-----------------DEIAIG-----KDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPK  131 (352)
T ss_dssp             CSEEEECCCSTTS-----------------CHHHHH-----HHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             CCEEEEcCCCCCc-----------------HHHHHH-----HHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHH
Confidence            8999999875310                 124433     34444444432125999999986 333444557899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHH--HHhhc----CCCCCCCCCCCCh-HHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE--VEKLF----EPQTPLEGVVLRA-GHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~-edva~~~~~l~  243 (264)
                      .+.+.+++..       +++++.+.||.+.+.............  .....    .........++++ +|+|++++.++
T Consensus       132 ~~~E~~~~~~-------gi~~~ivrpg~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l  204 (352)
T 1xgk_A          132 FTVENYVRQL-------GLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  204 (352)
T ss_dssp             HHHHHHHHTS-------SSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHc-------CCCEEEEecceecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHH
Confidence            9999988652       799999999977554332110000000  00000    0000011236678 89999999998


Q ss_pred             CCCCCCeeccEEEecCee
Q 041914          244 CRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~  261 (264)
                      ........|+.+++.++.
T Consensus       205 ~~~~~~~~g~~~~l~~~~  222 (352)
T 1xgk_A          205 KDGPQKWNGHRIALTFET  222 (352)
T ss_dssp             HHCHHHHTTCEEEECSEE
T ss_pred             hCCchhhCCeEEEEecCC
Confidence            643234568899998764

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=99.76  E-value=4e-18  Score=147.10  Aligned_cols=193  Identities=13%  Similarity=0.066  Sum_probs=138.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecC-CCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDV-TNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++|||||+|.||++++++|+++|+ +|+.                         +|. .|.+++.++++       ++|+
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~-------------------------~d~~~d~~~l~~~~~-------~~d~   49 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFE-------------------------VHRQTKEEELESALL-------KADF   49 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEE-------------------------CCTTCCHHHHHHHHH-------HCSE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEE-------------------------ECCCCCHHHHHHHhc-------cCCE
Confidence            699999999999999999999998 5443                         344 77888888776       5899


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHH
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVI  174 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~  174 (264)
                      +||+|+.....          ++++.+++|+.++.++++++    ++.+...++|++||.....    ...|+.+|.+.+
T Consensus        50 Vih~a~~~~~~----------~~~~~~~~n~~~~~~l~~a~----~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E  111 (369)
T 3st7_A           50 IVHLAGVNRPE----------HDKEFSLGNVSYLDHVLDIL----TRNTKKPAILLSSSIQATQ----DNPYGESKLQGE  111 (369)
T ss_dssp             EEECCCSBCTT----------CSTTCSSSCCBHHHHHHHHH----TTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHH
T ss_pred             EEECCcCCCCC----------CHHHHHHHHHHHHHHHHHHH----HHhCCCCeEEEeCchhhcC----CCCchHHHHHHH
Confidence            99999976532          23456788999988888876    4444234899999998764    578999999999


Q ss_pred             HHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCC-------CCCCCChHHHHHHHHHHhCCCC
Q 041914          175 GLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPL-------EGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       175 ~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~edva~~~~~l~s~~~  247 (264)
                      .+++.++.+.   |+++..+.|+.+.++............+........+.       ...++.++|+|++++.++....
T Consensus       112 ~~~~~~~~~~---g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~  188 (369)
T 3st7_A          112 QLLREYAEEY---GNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTP  188 (369)
T ss_dssp             HHHHHHHHHH---CCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHh---CCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCc
Confidence            9999998875   78999999999887743221111112222221111111       1246779999999999986442


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                       ...|+.+++.+|..+
T Consensus       189 -~~~~~~~~i~~~~~~  203 (369)
T 3st7_A          189 -TIENGVPTVPNVFKV  203 (369)
T ss_dssp             -CEETTEECCSCCEEE
T ss_pred             -ccCCceEEeCCCCce
Confidence             224889999887543

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=99.76  E-value=1.4e-17  Score=138.49  Aligned_cols=195  Identities=8%  Similarity=-0.009  Sum_probs=135.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++||||+ |.||.+++++|.++|++|+++.|+..+... +..    ..+.++.+|++|.+            ..++|++
T Consensus         6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~----~~~~~~~~D~~d~~------------~~~~d~v   67 (286)
T 3ius_A            6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEA-IRA----SGAEPLLWPGEEPS------------LDGVTHL   67 (286)
T ss_dssp             CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHH-HHH----TTEEEEESSSSCCC------------CTTCCEE
T ss_pred             CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhh-Hhh----CCCeEEEecccccc------------cCCCCEE
Confidence            68999998 999999999999999999999988765432 221    25889999999832            4589999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHc--CCCCcEEEEecCCCCCC-----------CCCC
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVE--GGVRGSIVCTASVAGSC-----------GGKR  162 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~--~~~~~~iv~iss~~~~~-----------~~~~  162 (264)
                      ||+|+.....       ..                .++.++..+++  .+ ..++|++||.....           +..+
T Consensus        68 i~~a~~~~~~-------~~----------------~~~~l~~a~~~~~~~-~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p  123 (286)
T 3ius_A           68 LISTAPDSGG-------DP----------------VLAALGDQIAARAAQ-FRWVGYLSTTAVYGDHDGAWVDETTPLTP  123 (286)
T ss_dssp             EECCCCBTTB-------CH----------------HHHHHHHHHHHTGGG-CSEEEEEEEGGGGCCCTTCEECTTSCCCC
T ss_pred             EECCCccccc-------cH----------------HHHHHHHHHHhhcCC-ceEEEEeecceecCCCCCCCcCCCCCCCC
Confidence            9999975432       10                12344444444  33 46999999976542           2234


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ...|+.+|.+.+.+++.+      .+++++.+.|+.+.++............... +...... ..++.++|+|++++.+
T Consensus       124 ~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~-~~~~~~~-~~~i~v~Dva~a~~~~  195 (286)
T 3ius_A          124 TAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGPGRGPFSKLGKGGIRR-IIKPGQV-FSRIHVEDIAQVLAAS  195 (286)
T ss_dssp             CSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBTTBSSSTTSSSSCCCE-EECTTCC-BCEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECCCchHHHHHhcCCccc-cCCCCcc-cceEEHHHHHHHHHHH
Confidence            567999999999988776      5899999999999887532211110000000 0011111 4577889999999999


Q ss_pred             hCCCCCCeeccEEEecCeeec
Q 041914          243 ACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +....   .|+.+++.+|..+
T Consensus       196 ~~~~~---~g~~~~i~~~~~~  213 (286)
T 3ius_A          196 MARPD---PGAVYNVCDDEPV  213 (286)
T ss_dssp             HHSCC---TTCEEEECCSCCB
T ss_pred             HhCCC---CCCEEEEeCCCCc
Confidence            97543   6889999887643

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=99.75  E-value=3.1e-17  Score=140.28  Aligned_cols=203  Identities=11%  Similarity=0.068  Sum_probs=134.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh---hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ..+++|||||+|.||++++++|++.|++|+++.|+...   ..+.+.. +....+.++.+|++|.+++.+++++.     
T Consensus         9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-l~~~~v~~~~~Dl~d~~~l~~~~~~~-----   82 (346)
T 3i6i_A            9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKA-LEDKGAIIVYGLINEQEAMEKILKEH-----   82 (346)
T ss_dssp             --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHH-HHHTTCEEEECCTTCHHHHHHHHHHT-----
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHH-HHhCCcEEEEeecCCHHHHHHHHhhC-----
Confidence            35789999999999999999999999999999997622   1121212 22236889999999999998888753     


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC----CCCCCCchh
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS----CGGKRRTDY  166 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~----~~~~~~~~y  166 (264)
                      ++|+|||+++..                     |+.++.++++++..    .+...++|+ |+....    .+.++...|
T Consensus        83 ~~d~Vi~~a~~~---------------------n~~~~~~l~~aa~~----~g~v~~~v~-S~~g~~~~e~~~~~p~~~y  136 (346)
T 3i6i_A           83 EIDIVVSTVGGE---------------------SILDQIALVKAMKA----VGTIKRFLP-SEFGHDVNRADPVEPGLNM  136 (346)
T ss_dssp             TCCEEEECCCGG---------------------GGGGHHHHHHHHHH----HCCCSEEEC-SCCSSCTTTCCCCTTHHHH
T ss_pred             CCCEEEECCchh---------------------hHHHHHHHHHHHHH----cCCceEEee-cccCCCCCccCcCCCcchH
Confidence            799999999862                     66677777776643    221246664 443322    123566789


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC----hHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP----ADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      +.+|.+.+.+.+.       .|+.+..++||.+.+..........    ............. ...+++++|+|++++.+
T Consensus       137 ~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~-~~~~i~~~Dva~~~~~~  208 (346)
T 3i6i_A          137 YREKRRVRQLVEE-------SGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNV-KAYFVAGTDIGKFTMKT  208 (346)
T ss_dssp             HHHHHHHHHHHHH-------TTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCC-CEEEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHH-------cCCCEEEEEecccccccCccccccccccCCCceEEEccCCCc-eEEecCHHHHHHHHHHH
Confidence            9999998887764       4799999999988775432211100    0000000111111 14578999999999999


Q ss_pred             hCCCCCCeeccEEEec
Q 041914          243 ACRDSEFVTGHDLVVD  258 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~d  258 (264)
                      +...  ...|+.+.+.
T Consensus       209 l~~~--~~~~~~~~i~  222 (346)
T 3i6i_A          209 VDDV--RTLNKSVHFR  222 (346)
T ss_dssp             TTCG--GGTTEEEECC
T ss_pred             HhCc--cccCeEEEEe
Confidence            8643  2336667765

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=99.75  E-value=2.4e-17  Score=138.42  Aligned_cols=199  Identities=12%  Similarity=0.130  Sum_probs=127.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-h-----hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQ-D-----ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++++||||+|+||++++++|+++|++|+++.|+. .     +..+.+.+. ....+.++.+|++|.+++.++++     
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l-~~~~v~~v~~D~~d~~~l~~~~~-----   75 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNY-QSLGVILLEGDINDHETLVKAIK-----   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHT-----
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHH-HhCCCEEEEeCCCCHHHHHHHHh-----
Confidence            46899999999999999999999999999998876 1     222222221 11257889999999998888776     


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------CCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------GGKR  162 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------~~~~  162 (264)
                        ++|+|||+++...                     +.+...++++    +++.+...++|.  |..+..      ..|.
T Consensus        76 --~~d~vi~~a~~~~---------------------~~~~~~l~~a----a~~~g~v~~~v~--S~~g~~~~~~~~~~p~  126 (307)
T 2gas_A           76 --QVDIVICAAGRLL---------------------IEDQVKIIKA----IKEAGNVKKFFP--SEFGLDVDRHDAVEPV  126 (307)
T ss_dssp             --TCSEEEECSSSSC---------------------GGGHHHHHHH----HHHHCCCSEEEC--SCCSSCTTSCCCCTTH
T ss_pred             --CCCEEEECCcccc---------------------cccHHHHHHH----HHhcCCceEEee--cccccCcccccCCCcc
Confidence              6999999998632                     2233334443    344321246663  443321      1222


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC----hHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP----ADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      ...| .+|.+++.+.+.       .+++++.++||++.+.+........    .......+.... ....+++++|+|++
T Consensus       127 ~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~Dva~~  197 (307)
T 2gas_A          127 RQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGN-VKGAYVTEADVGTF  197 (307)
T ss_dssp             HHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSC-SEEEEECHHHHHHH
T ss_pred             hhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCC-cceEEeeHHHHHHH
Confidence            4578 999999887753       3799999999999886543221110    000000111111 11346799999999


Q ss_pred             HHHHhCCCCCCeeccEEEecC
Q 041914          239 VLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      ++.++.+..  ..|+.+.+.|
T Consensus       198 ~~~~l~~~~--~~~~~~~~~~  216 (307)
T 2gas_A          198 TIRAANDPN--TLNKAVHIRL  216 (307)
T ss_dssp             HHHHHTCGG--GTTEEEECCC
T ss_pred             HHHHHcCcc--ccCceEEEeC
Confidence            999996532  3477777764

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=99.72  E-value=9.4e-17  Score=137.91  Aligned_cols=215  Identities=12%  Similarity=0.057  Sum_probs=140.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC-----CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           15 GKVAIITGGASGIGETTARLFADHG-----ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|||||+|+||.+++++|+++|     ++|+++.|+.....      ....++.++.+|++|.+++.++++..    
T Consensus         1 ~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~------~~~~~~~~~~~Dl~d~~~~~~~~~~~----   70 (364)
T 2v6g_A            1 SSVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW------HEDNPINYVQCDISDPDDSQAKLSPL----   70 (364)
T ss_dssp             CEEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC------CCSSCCEEEECCTTSHHHHHHHHTTC----
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc------cccCceEEEEeecCCHHHHHHHHhcC----
Confidence            4789999999999999999999999     99999888765432      12236788999999998888776522    


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEE-------EecCCCCCCC---
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIV-------CTASVAGSCG---  159 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv-------~iss~~~~~~---  159 (264)
                      +++|++||+|+....           ++++.+++|+.++.++++++.+...  + ..++|       ++||......   
T Consensus        71 ~~~d~vih~a~~~~~-----------~~~~~~~~n~~~~~~l~~a~~~~~~--~-~~~~v~~~g~~i~~Ss~~vyg~~~~  136 (364)
T 2v6g_A           71 TDVTHVFYVTWANRS-----------TEQENCEANSKMFRNVLDAVIPNCP--N-LKHISLQTGRKHYMGPFESYGKIES  136 (364)
T ss_dssp             TTCCEEEECCCCCCS-----------SHHHHHHHHHHHHHHHHHHHTTTCT--T-CCEEEEECCTHHHHCCGGGTTTSCC
T ss_pred             CCCCEEEECCCCCcc-----------hHHHHHHHhHHHHHHHHHHHHHhcc--c-cceEEeccCceEEEechhhcccccc
Confidence            249999999996521           3678899999999999998854311  2 34666       6887653311   


Q ss_pred             -----------CCCCchhhchHHHHHHHHHHHHHHhCcCC-ceEEEeeCCcccCcccccccCCChHH-HHhhc----CCC
Q 041914          160 -----------GKRRTDYHMSKHAVIGLVRSASVQLGVHG-IRVNCVSPHGLATPLTCHAYGMPADE-VEKLF----EPQ  222 (264)
Q Consensus       160 -----------~~~~~~y~~sK~al~~~~~~la~e~~~~~-i~v~~v~pG~v~t~~~~~~~~~~~~~-~~~~~----~~~  222 (264)
                                 .+....|    .+.+.+++.++.   ..+ +++..+.|+.+..+............ ....+    ...
T Consensus       137 ~~~~~~E~~~~~~~~~~y----~~~E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~  209 (364)
T 2v6g_A          137 HDPPYTEDLPRLKYMNFY----YDLEDIMLEEVE---KKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKV  209 (364)
T ss_dssp             CCSSBCTTSCCCSSCCHH----HHHHHHHHHHHT---TSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCC
T ss_pred             CCCCCCccccCCccchhh----HHHHHHHHHHhh---cCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCc
Confidence                       1123345    234444444432   245 99999999999887543211100111 11111    111


Q ss_pred             C--CCC-------CCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          223 T--PLE-------GVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       223 ~--~~~-------~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .  +..       -...+++|+|++++.++...  ...|+.+++.+|..
T Consensus       210 ~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~~~--~~~g~~~ni~~~~~  256 (364)
T 2v6g_A          210 LRFTGCKAAWDGYSDCSDADLIAEHHIWAAVDP--YAKNEAFNVSNGDV  256 (364)
T ss_dssp             BCCCSCHHHHHSCBCCEEHHHHHHHHHHHHHCG--GGTTEEEEECCSCC
T ss_pred             eecCCCcccccccCCCCcHHHHHHHHHHHHhCC--CCCCceEEecCCCc
Confidence            1  110       12345588999999988533  24688999988753

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=99.72  E-value=1.5e-17  Score=140.59  Aligned_cols=198  Identities=10%  Similarity=0.034  Sum_probs=124.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +++|||||+|+||.+++++|+++|++|+++.|+.....+.+.+... ..+.++.+|++|.+++.++++       ++|+|
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~-~~v~~v~~Dl~d~~~l~~a~~-------~~d~v   83 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQS-LGAIIVKGELDEHEKLVELMK-------KVDVV   83 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHH-TTCEEEECCTTCHHHHHHHHT-------TCSEE
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhc-CCCEEEEecCCCHHHHHHHHc-------CCCEE
Confidence            6799999999999999999999999999999886533222222111 257889999999999888876       68999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---C---CCCchhhch
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---G---KRRTDYHMS  169 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---~---~~~~~y~~s  169 (264)
                      ||+++...                     +.+.    +.+++.+++.+..+++|+ |+ .+...   .   |....| .+
T Consensus        84 i~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v~-S~-~g~~~~~~~~~~p~~~~y-~s  135 (318)
T 2r6j_A           84 ISALAFPQ---------------------ILDQ----FKILEAIKVAGNIKRFLP-SD-FGVEEDRINALPPFEALI-ER  135 (318)
T ss_dssp             EECCCGGG---------------------STTH----HHHHHHHHHHCCCCEEEC-SC-CSSCTTTCCCCHHHHHHH-HH
T ss_pred             EECCchhh---------------------hHHH----HHHHHHHHhcCCCCEEEe-ec-cccCcccccCCCCcchhH-HH
Confidence            99998531                     1122    334444444321346763 43 33211   1   123467 89


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      |.+++.+.+.       .++.+..+.||.+............ .......+.... ....+++++|++++++.++.... 
T Consensus       136 K~~~e~~~~~-------~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~Dva~~~~~~l~~~~-  206 (318)
T 2r6j_A          136 KRMIRRAIEE-------ANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGE-AKFAMNYEQDIGLYTIKVATDPR-  206 (318)
T ss_dssp             HHHHHHHHHH-------TTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSC-CEEEEECHHHHHHHHHHHTTCGG-
T ss_pred             HHHHHHHHHh-------cCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCC-ceeeEeeHHHHHHHHHHHhcCcc-
Confidence            9998887753       4788889999987654321110000 000000011111 11346789999999999986532 


Q ss_pred             CeeccEEEecC
Q 041914          249 FVTGHDLVVDG  259 (264)
Q Consensus       249 ~~~G~~i~~dg  259 (264)
                       ..|+.+.+.|
T Consensus       207 -~~~~~~~~~g  216 (318)
T 2r6j_A          207 -ALNRVVIYRP  216 (318)
T ss_dssp             -GTTEEEECCC
T ss_pred             -ccCeEEEecC
Confidence             2366777754

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=99.71  E-value=1.2e-16  Score=134.52  Aligned_cols=203  Identities=11%  Similarity=0.088  Sum_probs=129.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh----hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDE----LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++|||||+|+||++++++|+++|++|+++.|+...    ..+.+... ....+.++.+|++|++++.++++       +
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~~~~~~~D~~d~~~l~~~~~-------~   76 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF-KQLGAKLIEASLDDHQRLVDALK-------Q   76 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH-HTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHH-HhCCeEEEeCCCCCHHHHHHHHh-------C
Confidence            679999999999999999999999999999987532    22222221 22357889999999998888775       6


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----C-CCCCch
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----G-GKRRTD  165 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----~-~~~~~~  165 (264)
                      +|+|||+++.....                 .|+.+...+++++    ++.+..+++|+ |+.....     + .+....
T Consensus        77 ~d~vi~~a~~~~~~-----------------~~~~~~~~l~~aa----~~~g~v~~~v~-S~~g~~~~~~~~~~~p~~~~  134 (313)
T 1qyd_A           77 VDVVISALAGGVLS-----------------HHILEQLKLVEAI----KEAGNIKRFLP-SEFGMDPDIMEHALQPGSIT  134 (313)
T ss_dssp             CSEEEECCCCSSSS-----------------TTTTTHHHHHHHH----HHSCCCSEEEC-SCCSSCTTSCCCCCSSTTHH
T ss_pred             CCEEEECCccccch-----------------hhHHHHHHHHHHH----HhcCCCceEEe-cCCcCCccccccCCCCCcch
Confidence            89999999975321                 1444555555544    44331347774 4332111     1 133556


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-----ChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-----PADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      | .+|.+++.+.+       ..|++++.+.||.+.+.+.......     ........+.... ....+++++|+|++++
T Consensus       135 y-~sK~~~e~~~~-------~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~~~Dva~~~~  205 (313)
T 1qyd_A          135 F-IDKRKVRRAIE-------AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGN-VKGIWVDEDDVGTYTI  205 (313)
T ss_dssp             H-HHHHHHHHHHH-------HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSC-SEEEEECHHHHHHHHH
T ss_pred             H-HHHHHHHHHHH-------hcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCC-ceEEEEEHHHHHHHHH
Confidence            8 99999888775       2478999999998876543221110     0000000011101 1134678999999999


Q ss_pred             HHhCCCCCCeeccEEEecC
Q 041914          241 FLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dg  259 (264)
                      .++....  ..|+.+.+.|
T Consensus       206 ~~l~~~~--~~~~~~~~~g  222 (313)
T 1qyd_A          206 KSIDDPQ--TLNKTMYIRP  222 (313)
T ss_dssp             HHTTCGG--GSSSEEECCC
T ss_pred             HHHhCcc--cCCceEEEeC
Confidence            9986432  2367777764

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=99.71  E-value=2e-17  Score=139.93  Aligned_cols=198  Identities=12%  Similarity=0.083  Sum_probs=126.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc-h----hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQ-D----ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++++||||+|+||++++++|+++|++|.++.|+. .    +..+.+... ....+.++.+|++|.+++.++++       
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~-~~~~v~~v~~D~~d~~~l~~a~~-------   76 (321)
T 3c1o_A            5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEF-RSMGVTIIEGEMEEHEKMVSVLK-------   76 (321)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHH-HHTTCEEEECCTTCHHHHHHHHT-------
T ss_pred             cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHh-hcCCcEEEEecCCCHHHHHHHHc-------
Confidence            6799999999999999999999999999999886 2    222222221 11357899999999999888876       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----C-CCCCc
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----G-GKRRT  164 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----~-~~~~~  164 (264)
                      ++|+|||+++...                     +.+.    +.+++.+.+.+..+++|  .|..+..     + .+...
T Consensus        77 ~~d~vi~~a~~~~---------------------~~~~----~~l~~aa~~~g~v~~~v--~S~~g~~~~~~~~~~p~~~  129 (321)
T 3c1o_A           77 QVDIVISALPFPM---------------------ISSQ----IHIINAIKAAGNIKRFL--PSDFGCEEDRIKPLPPFES  129 (321)
T ss_dssp             TCSEEEECCCGGG---------------------SGGG----HHHHHHHHHHCCCCEEE--CSCCSSCGGGCCCCHHHHH
T ss_pred             CCCEEEECCCccc---------------------hhhH----HHHHHHHHHhCCccEEe--ccccccCccccccCCCcch
Confidence            6899999998532                     1222    34444444432124676  3443321     1 12245


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC----ChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      .| .+|.+++.+++.       .+++++.+.||.+.+.........    ........+..... ...+++++|+|++++
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~~~  200 (321)
T 3c1o_A          130 VL-EKKRIIRRAIEA-------AALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGET-KFVLNYEEDIAKYTI  200 (321)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCC-EEEEECHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHH-------cCCCeEEEEeceeccccccccccccccccccCceEEecCCCc-ceeEeeHHHHHHHHH
Confidence            68 999999888763       268888899998866532211100    00000001111111 135779999999999


Q ss_pred             HHhCCCCCCeeccEEEecC
Q 041914          241 FLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dg  259 (264)
                      .++....  ..|+.+.+.|
T Consensus       201 ~~l~~~~--~~g~~~~~~g  217 (321)
T 3c1o_A          201 KVACDPR--CCNRIVIYRP  217 (321)
T ss_dssp             HHHHCGG--GTTEEEECCC
T ss_pred             HHHhCcc--ccCeEEEEeC
Confidence            9986432  3478888875

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=99.67  E-value=2.2e-16  Score=132.65  Aligned_cols=200  Identities=12%  Similarity=0.151  Sum_probs=125.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh-----hHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE-----LGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++||||+|+||++++++|+++|++|+++.|+...     ..+.+.. +....+.++.+|++|.+++.++++      
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~-l~~~~v~~v~~D~~d~~~l~~~~~------   76 (308)
T 1qyc_A            4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLES-FKASGANIVHGSIDDHASLVEAVK------   76 (308)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHH-HHTTTCEEECCCTTCHHHHHHHHH------
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHH-HHhCCCEEEEeccCCHHHHHHHHc------
Confidence            3679999999999999999999999999988887532     1122222 222357889999999999888876      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----C-CCCCc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----G-GKRRT  164 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----~-~~~~~  164 (264)
                       ++|++||+++...                     +.+..    .+++.+++.+..+++|+ |+.....    + .|...
T Consensus        77 -~~d~vi~~a~~~~---------------------~~~~~----~l~~aa~~~g~v~~~v~-S~~g~~~~~~~~~~p~~~  129 (308)
T 1qyc_A           77 -NVDVVISTVGSLQ---------------------IESQV----NIIKAIKEVGTVKRFFP-SEFGNDVDNVHAVEPAKS  129 (308)
T ss_dssp             -TCSEEEECCCGGG---------------------SGGGH----HHHHHHHHHCCCSEEEC-SCCSSCTTSCCCCTTHHH
T ss_pred             -CCCEEEECCcchh---------------------hhhHH----HHHHHHHhcCCCceEee-cccccCccccccCCcchh
Confidence             6899999998531                     11223    33344444321346763 4433221    1 12245


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC----hHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP----ADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      .| .+|.+++.+.+.       .++++..+.||.+.+.+........    .......+.... ....+++++|++++++
T Consensus       130 ~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~Dva~~~~  200 (308)
T 1qyc_A          130 VF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGN-ARVVFVKEEDIGTFTI  200 (308)
T ss_dssp             HH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSC-CEEEEECHHHHHHHHH
T ss_pred             HH-HHHHHHHHHHHh-------cCCCeEEEEeceeccccccccccccccCCCCCceEEecCCC-ceEEEecHHHHHHHHH
Confidence            68 999998887753       3688889999988665432111100    000000011111 1134678999999999


Q ss_pred             HHhCCCCCCeeccEEEecC
Q 041914          241 FLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dg  259 (264)
                      .++...  ...|+.+.+.|
T Consensus       201 ~~l~~~--~~~~~~~~~~g  217 (308)
T 1qyc_A          201 KAVDDP--RTLNKTLYLRL  217 (308)
T ss_dssp             TTSSCG--GGTTEEEECCC
T ss_pred             HHHhCc--cccCeEEEEeC
Confidence            998643  23367777764

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=99.66  E-value=4.8e-16  Score=139.86  Aligned_cols=204  Identities=11%  Similarity=-0.015  Sum_probs=137.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +++||||||+|.||.+++++|+++|++|+++.|+..+.             ..+.+|+.+..         .+.+.++|+
T Consensus       147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~-------------~~v~~d~~~~~---------~~~l~~~D~  204 (516)
T 3oh8_A          147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP-------------GKRFWDPLNPA---------SDLLDGADV  204 (516)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT-------------TCEECCTTSCC---------TTTTTTCSE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc-------------cceeecccchh---------HHhcCCCCE
Confidence            67999999999999999999999999999999886642             12567776421         223358999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCC
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRR  163 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~  163 (264)
                      |||+|+.....     ..+.+..+..+++|+.++.++++++.   ++.+ .+++|++||...+.           ...+.
T Consensus       205 Vih~A~~~~~~-----~~~~~~~~~~~~~Nv~gt~~ll~a~a---~~~~-~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~  275 (516)
T 3oh8_A          205 LVHLAGEPIFG-----RFNDSHKEAIRESRVLPTKFLAELVA---ESTQ-CTTMISASAVGFYGHDRGDEILTEESESGD  275 (516)
T ss_dssp             EEECCCC----------CCGGGHHHHHHHTHHHHHHHHHHHH---HCSS-CCEEEEEEEGGGGCSEEEEEEECTTSCCCS
T ss_pred             EEECCCCcccc-----ccchhHHHHHHHHHHHHHHHHHHHHH---hcCC-CCEEEEeCcceEecCCCCCCccCCCCCCCc
Confidence            99999975332     24456788899999999999999743   3333 56999999976543           11244


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC-------CCCCCCCCChHHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ-------TPLEGVVLRAGHVA  236 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~edva  236 (264)
                      ..|+.+|...+.+.+.    +...|++++.+.||.+.++...     ....+...+...       ......++.++|+|
T Consensus       276 ~~y~~~~~~~E~~~~~----~~~~gi~~~ilRp~~v~Gp~~~-----~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva  346 (516)
T 3oh8_A          276 DFLAEVCRDWEHATAP----ASDAGKRVAFIRTGVALSGRGG-----MLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLT  346 (516)
T ss_dssp             SHHHHHHHHHHHTTHH----HHHTTCEEEEEEECEEEBTTBS-----HHHHHHHTTC---CCCCTTSCCEECEEEHHHHH
T ss_pred             ChHHHHHHHHHHHHHH----HHhCCCCEEEEEeeEEECCCCC-----hHHHHHHHHHhCCCcccCCCCceEceEeHHHHH
Confidence            5677777776655432    3346899999999999887421     111111111110       00113467899999


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ++++.++....  ..| .+++.+|.
T Consensus       347 ~ai~~~l~~~~--~~g-~~ni~~~~  368 (516)
T 3oh8_A          347 DIYYRAIVDAQ--ISG-PINAVAPN  368 (516)
T ss_dssp             HHHHHHHHCTT--CCE-EEEESCSC
T ss_pred             HHHHHHHhCcc--cCC-cEEEECCC
Confidence            99999986432  345 56666654

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=99.50  E-value=5e-13  Score=111.69  Aligned_cols=202  Identities=11%  Similarity=0.016  Sum_probs=125.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +||||||+|.||++++++|.++|++|+++.|++.+.           .   +..|     .+      ..+...++|.+|
T Consensus         2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~-----------~---~~~~-----~~------~~~~l~~~d~vi   56 (298)
T 4b4o_A            2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG-----------R---ITWD-----EL------AASGLPSCDAAV   56 (298)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------E---EEHH-----HH------HHHCCCSCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC-----------e---eecc-----hh------hHhhccCCCEEE
Confidence            589999999999999999999999999999875431           1   1222     11      112346899999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-----------CCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-----------GKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-----------~~~~~~  165 (264)
                      |.|+.....  +....+....+..++.|+.++-.+.+.+...  ..+ ..++|+.||.....+           ..+...
T Consensus        57 hla~~~i~~--~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~--~~~-~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~  131 (298)
T 4b4o_A           57 NLAGENILN--PLRRWNETFQKEVLGSRLETTQLLAKAITKA--PQP-PKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDF  131 (298)
T ss_dssp             ECCCCCSSC--TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHC--SSC-CSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSH
T ss_pred             EeccCcccc--hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHh--CCC-ceEEEEEeeeeeecCCCCCcccccCCccccch
Confidence            999864332  3444577778889999998887777665321  112 346788887765432           122233


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh--cCC-----CCCCCCCCCChHHHHHH
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL--FEP-----QTPLEGVVLRAGHVADA  238 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~~edva~~  238 (264)
                      |+..+...+.     +......++++..+.||.+..+.....     ......  ...     .......++.++|++++
T Consensus       132 ~~~~~~~~e~-----~~~~~~~~~~~~~~r~~~v~g~~~~~~-----~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a  201 (298)
T 4b4o_A          132 FSNLVTKWEA-----AARLPGDSTRQVVVRSGVVLGRGGGAM-----GHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGI  201 (298)
T ss_dssp             HHHHHHHHHH-----HHCCSSSSSEEEEEEECEEECTTSHHH-----HHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHH
T ss_pred             hHHHHHHHHH-----HHHhhccCCceeeeeeeeEEcCCCCch-----hHHHHHHhcCCcceecccCceeecCcHHHHHHH
Confidence            4433333222     223456789999999999887632110     111110  000     01111345788999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCee
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +..++...  ...| .+++.++.
T Consensus       202 ~~~~~~~~--~~~g-~yn~~~~~  221 (298)
T 4b4o_A          202 LTHALEAN--HVHG-VLNGVAPS  221 (298)
T ss_dssp             HHHHHHCT--TCCE-EEEESCSC
T ss_pred             HHHHHhCC--CCCC-eEEEECCC
Confidence            99988533  3455 77777654

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=99.34  E-value=8.3e-14  Score=115.99  Aligned_cols=110  Identities=17%  Similarity=0.229  Sum_probs=77.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|++|||||+||+|+++++.|+++|++|+++.|+.++.. .+.+.+.. ..+.++.+|+++.+++.++++      
T Consensus       115 ~~l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~-~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~------  187 (287)
T 1lu9_A          115 GSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQ-AAADSVNKRFKVNVTAAETADDASRAEAVK------  187 (287)
T ss_dssp             SCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHHHHHHHHHTCCCEEEECCSHHHHHHHTT------
T ss_pred             cCCCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHH-HHHHHHHhcCCcEEEEecCCCHHHHHHHHH------
Confidence            4578999999999999999999999999999777777655443 33322211 235678899999988877665      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCH-HHHHHHHhhHHHHHH
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDF-SAFDRLFAINVRGMA  129 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~-~~~~~~~~~n~~~~~  129 (264)
                       .+|+||||+|..... .++.+.+. +.|+.++++|+.+++
T Consensus       188 -~~DvlVn~ag~g~~~-~~~~~~~~~~~~~~~~dvn~~~~~  226 (287)
T 1lu9_A          188 -GAHFVFTAGAIGLEL-LPQAAWQNESSIEIVADYNAQPPL  226 (287)
T ss_dssp             -TCSEEEECCCTTCCS-BCHHHHTTCTTCCEEEECCCSSSC
T ss_pred             -hCCEEEECCCccccC-CChhHcCchHHHHHHHHhhhhhhH
Confidence             589999999864322 12222222 344456777776655

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=99.21  E-value=2.8e-11  Score=102.53  Aligned_cols=150  Identities=12%  Similarity=0.028  Sum_probs=97.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCch-hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-------RMIVIADIQD-ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++||||+|.||.+++..|+++|.       +|+++.+... +..+.....+....+.++ .|+.+.++....+     
T Consensus         5 mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~~~~a~-----   78 (327)
T 1y7t_A            5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDDPKVAF-----   78 (327)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESCHHHHT-----
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccChHHHh-----
Confidence            4799999999999999999999986       6666665431 111111111111111122 4555433333333     


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC--------CC-
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG--------SC-  158 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~--------~~-  158 (264)
                        .+.|++||.||.....     ..   ...+.++.|+.++..+++++...-   +...+++++|+...        .. 
T Consensus        79 --~~~D~Vih~Ag~~~~~-----~~---~~~~~~~~Nv~~t~~l~~a~~~~~---~~~~~vvv~snp~~~~~~~~~~~~~  145 (327)
T 1y7t_A           79 --KDADYALLVGAAPRKA-----GM---ERRDLLQVNGKIFTEQGRALAEVA---KKDVKVLVVGNPANTNALIAYKNAP  145 (327)
T ss_dssp             --TTCSEEEECCCCCCCT-----TC---CHHHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHHHHTCT
T ss_pred             --CCCCEEEECCCcCCCC-----CC---CHHHHHHHHHHHHHHHHHHHHhhc---CCCeEEEEeCCchhhhHHHHHHHcC
Confidence              3789999999975421     12   245689999999999888875431   12458888887541        11 


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHh
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQL  184 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~  184 (264)
                      +.++...|+.+|...+.+.+.++..+
T Consensus       146 ~~~p~~~yg~tkl~~er~~~~~a~~~  171 (327)
T 1y7t_A          146 GLNPRNFTAMTRLDHNRAKAQLAKKT  171 (327)
T ss_dssp             TSCGGGEEECCHHHHHHHHHHHHHHH
T ss_pred             CCChhheeccchHHHHHHHHHHHHHh
Confidence            24456679999999999999888775

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=99.12  E-value=1.6e-10  Score=91.83  Aligned_cols=153  Identities=12%  Similarity=0.067  Sum_probs=92.8

Q ss_pred             cCCCcEEEEeCC----------------CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCH
Q 041914           12 KLEGKVAIITGG----------------ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE   75 (264)
Q Consensus        12 ~l~~k~vlItGa----------------s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~   75 (264)
                      +|.||++|||||                |||||+++|++|+++|++|+++++... ..      ... .+  -.+|+++.
T Consensus         5 ~l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~------~~~-g~--~~~dv~~~   74 (226)
T 1u7z_A            5 DLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LP------TPP-FV--KRVDVMTA   74 (226)
T ss_dssp             TTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CC------CCT-TE--EEEECCSH
T ss_pred             CCCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-cc------cCC-CC--eEEccCcH
Confidence            588999999999                699999999999999999988877642 10      011 12  24688775


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHH---HHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR---LFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~---~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                         .++++.+.+.++++|++|||||+....  ++ +.+.+.+.+   . +.++.-.+..+.-+++.+.+....+.++ ++
T Consensus        75 ---~~~~~~v~~~~~~~Dili~~Aav~d~~--p~-~~~~~KIkk~~~~-~~~l~l~L~~~pdIL~~l~~~~~~~~~~-VG  146 (226)
T 1u7z_A           75 ---LEMEAAVNASVQQQNIFIGCAAVADYR--AA-TVAPEKIKKQATQ-GDELTIKMVKNPDIVAGVAALKDHRPYV-VG  146 (226)
T ss_dssp             ---HHHHHHHHHHGGGCSEEEECCBCCSEE--ES-SCCSSCC--------CEEEEEEEECCCHHHHHHHCSSSCCEE-EE
T ss_pred             ---HHHHHHHHHhcCCCCEEEECCcccCCC--Cc-cCChHHhcccccc-CCceEEEEeecHHHHHHHHhhhcCCcEE-EE
Confidence               445667777888999999999986432  22 222222333   1 1222223334445666665531123332 11


Q ss_pred             CCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCc
Q 041914          153 SVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHG  198 (264)
Q Consensus       153 s~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~  198 (264)
                       ....         .      +.+.+....++.++|+.+.+.+|-.
T Consensus       147 -FaaE---------t------~~l~e~A~~kL~~k~~d~ivaN~~~  176 (226)
T 1u7z_A          147 -FAAE---------T------NNVEEYARQKRIRKNLDLICANDVS  176 (226)
T ss_dssp             -EEEE---------S------SSHHHHHHHHHHHHTCSEEEEEECS
T ss_pred             -cchh---------h------chHHHHHHHHHHhcCCCEEEEeecc
Confidence             1111         0      2366666677777788777777643

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=99.00  E-value=9.9e-11  Score=93.19  Aligned_cols=93  Identities=10%  Similarity=0.149  Sum_probs=65.1

Q ss_pred             CCcEEEEeCC----------------CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHH
Q 041914           14 EGKVAIITGG----------------ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ   77 (264)
Q Consensus        14 ~~k~vlItGa----------------s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~   77 (264)
                      .||++|||||                ||++|.++|++|+++|++|++++|......     .. ...+..+  |+.   +
T Consensus         2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~-----~~-~~~~~~~--~v~---s   70 (232)
T 2gk4_A            2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP-----EP-HPNLSIR--EIT---N   70 (232)
T ss_dssp             -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC-----CC-CTTEEEE--ECC---S
T ss_pred             CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----cC-CCCeEEE--EHh---H
Confidence            5899999999                788999999999999999999998753210     00 1123333  444   5


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHH
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDR  119 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~  119 (264)
                      +.++++.+.+.++++|++|+||++....  +....+.+.+.+
T Consensus        71 ~~em~~~v~~~~~~~Dili~aAAvsD~~--p~~~~~~e~~~~  110 (232)
T 2gk4_A           71 TKDLLIEMQERVQDYQVLIHSMAVSDYT--PVYMTGLEEVQA  110 (232)
T ss_dssp             HHHHHHHHHHHGGGCSEEEECSBCCSEE--EEEEEEHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCEEEEcCcccccc--chhhcchhhhhc
Confidence            6667777777888999999999986543  444344444443

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.81  E-value=2.4e-08  Score=71.02  Aligned_cols=74  Identities=16%  Similarity=0.137  Sum_probs=58.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .+++++|+|+ |++|.++++.|.+.| ++|+++.|+.++.. .+.    ...+.++.+|+++.+++.++++       ++
T Consensus         4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~-~~~----~~~~~~~~~d~~~~~~~~~~~~-------~~   70 (118)
T 3ic5_A            4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALA-VLN----RMGVATKQVDAKDEAGLAKALG-------GF   70 (118)
T ss_dssp             TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHH-HHH----TTTCEEEECCTTCHHHHHHHTT-------TC
T ss_pred             CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHH-HHH----hCCCcEEEecCCCHHHHHHHHc-------CC
Confidence            3578999999 999999999999999 88777777655432 222    2246778999999887776654       78


Q ss_pred             cEEEEcCC
Q 041914           93 DIMFSNAG  100 (264)
Q Consensus        93 d~lv~~ag  100 (264)
                      |++|++++
T Consensus        71 d~vi~~~~   78 (118)
T 3ic5_A           71 DAVISAAP   78 (118)
T ss_dssp             SEEEECSC
T ss_pred             CEEEECCC
Confidence            99999985

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.71  E-value=2.1e-08  Score=75.54  Aligned_cols=76  Identities=16%  Similarity=0.161  Sum_probs=59.1

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEecCchhhH-----HHHHhhhCCCcEEEEEecCCCH--HHHHHHHHHHHHhcCCccEEEE
Q 041914           25 SGIGETTARLFADHGARMIVIADIQDELG-----RQVATSIGVGKCHYVHCDVTNE--CQVKALVDSTVQNYGQLDIMFS   97 (264)
Q Consensus        25 ~giG~~ia~~l~~~g~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~D~s~~--~~~~~~~~~~~~~~~~id~lv~   97 (264)
                      +-++.++++.|++.|++|++..|...+..     ....+. .+.++..+++|++++  ++++++++.+.+.+|+ |+|||
T Consensus        26 ~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~-~G~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVn  103 (157)
T 3gxh_A           26 GLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQ-AGMDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVH  103 (157)
T ss_dssp             BCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHH-TTCEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEE
T ss_pred             CCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHH-cCCeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEE
Confidence            34779999999999999888777554321     111111 234678889999999  9999999999998999 99999


Q ss_pred             cCCCC
Q 041914           98 NAGIL  102 (264)
Q Consensus        98 ~ag~~  102 (264)
                      |+|+.
T Consensus       104 nAgg~  108 (157)
T 3gxh_A          104 CLANY  108 (157)
T ss_dssp             CSBSH
T ss_pred             CCCCC
Confidence            99964

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=98.55  E-value=3.5e-11  Score=105.52  Aligned_cols=41  Identities=29%  Similarity=0.349  Sum_probs=34.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .++.||+++|||++ +||+++++.|+..|++|+++.++....
T Consensus       261 ~~L~GKtVvVtGaG-gIG~aiA~~Laa~GA~Viv~D~~~~~a  301 (488)
T 3ond_A          261 VMIAGKVAVVAGYG-DVGKGCAAALKQAGARVIVTEIDPICA  301 (488)
T ss_dssp             CCCTTCEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CcccCCEEEEECCC-HHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            45899999999987 999999999999999977776655443

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=98.54  E-value=4e-07  Score=79.14  Aligned_cols=79  Identities=18%  Similarity=0.257  Sum_probs=61.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC---cEEEEecCchhhHHHHHhhhCC---CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           16 KVAIITGGASGIGETTARLFADHGA---RMIVIADIQDELGRQVATSIGV---GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~---~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|+|+ |++|+++++.|+++|.   .|++..|+.++. +.+.+....   .++..+.+|++|.+++++++++.    
T Consensus         2 ~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~-~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~----   75 (405)
T 4ina_A            2 AKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKC-QEIAQSIKAKGYGEIDITTVDADSIEELVALINEV----   75 (405)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHH-HHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH----
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHH-HHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh----
Confidence            57899999 8999999999999984   666666665554 333333321   25788999999999999998865    


Q ss_pred             CCccEEEEcCCC
Q 041914           90 GQLDIMFSNAGI  101 (264)
Q Consensus        90 ~~id~lv~~ag~  101 (264)
                       ++|+||||++.
T Consensus        76 -~~DvVin~ag~   86 (405)
T 4ina_A           76 -KPQIVLNIALP   86 (405)
T ss_dssp             -CCSEEEECSCG
T ss_pred             -CCCEEEECCCc
Confidence             68999999974

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=98.46  E-value=4.3e-07  Score=79.94  Aligned_cols=78  Identities=15%  Similarity=0.277  Sum_probs=58.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++|+++|+| +|++|+++++.|++.|++|+++.|+.++. +.+.+..  ..+..+.+|++|.+++.++++       ++|
T Consensus         2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a-~~la~~~--~~~~~~~~Dv~d~~~l~~~l~-------~~D   70 (450)
T 1ff9_A            2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESA-KKLSAGV--QHSTPISLDVNDDAALDAEVA-------KHD   70 (450)
T ss_dssp             CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHH-HHTTTTC--TTEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHH-HHHHHhc--CCceEEEeecCCHHHHHHHHc-------CCc
Confidence            368999998 79999999999999999977777764433 3322222  246788999999988877664       799


Q ss_pred             EEEEcCCCC
Q 041914           94 IMFSNAGIL  102 (264)
Q Consensus        94 ~lv~~ag~~  102 (264)
                      +|||+++..
T Consensus        71 vVIn~a~~~   79 (450)
T 1ff9_A           71 LVISLIPYT   79 (450)
T ss_dssp             EEEECCC--
T ss_pred             EEEECCccc
Confidence            999999864

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.45  E-value=3.5e-07  Score=78.58  Aligned_cols=108  Identities=19%  Similarity=0.274  Sum_probs=71.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.+++++|+|+ |++|+.+++.+...|++|+++.++.++. +.+.+.... .   +.+|.++.+++.+++.       +
T Consensus       163 ~l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~-~~~~~~~g~-~---~~~~~~~~~~l~~~~~-------~  229 (369)
T 2eez_A          163 GVAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRL-QYLDDVFGG-R---VITLTATEANIKKSVQ-------H  229 (369)
T ss_dssp             BBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHTTT-S---EEEEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHHhcCc-e---EEEecCCHHHHHHHHh-------C
Confidence            578999999999 9999999999999999977777765543 333332222 2   4567788777766654       5


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      .|++|++++.....                     .+..+.+..++.|++   .+.||++++..+
T Consensus       230 ~DvVi~~~g~~~~~---------------------~~~li~~~~l~~mk~---gg~iV~v~~~~g  270 (369)
T 2eez_A          230 ADLLIGAVLVPGAK---------------------APKLVTRDMLSLMKE---GAVIVDVAVDQG  270 (369)
T ss_dssp             CSEEEECCC----------------------------CCSCHHHHTTSCT---TCEEEECC----
T ss_pred             CCEEEECCCCCccc---------------------cchhHHHHHHHhhcC---CCEEEEEecCCC
Confidence            79999999864311                     012234566666653   579999987643

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=98.44  E-value=3.5e-07  Score=71.37  Aligned_cols=103  Identities=15%  Similarity=0.236  Sum_probs=67.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++|||||++|+|.++++.+...|++|+++.++.+.. +.+.+ ... .   ..+|.++.+..+.+.+...  .+++|
T Consensus        38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-~~~~~-~g~-~---~~~d~~~~~~~~~~~~~~~--~~~~D  109 (198)
T 1pqw_A           38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSR-LGV-E---YVGDSRSVDFADEILELTD--GYGVD  109 (198)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHT-TCC-S---EEEETTCSTHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-cCC-C---EEeeCCcHHHHHHHHHHhC--CCCCe
Confidence            589999999999999999999999999988877765443 22222 221 1   2247776544443333221  13699


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++|+|+|.   .          .               .+.+++.++.   .|++|.+++..
T Consensus       110 ~vi~~~g~---~----------~---------------~~~~~~~l~~---~G~~v~~g~~~  140 (198)
T 1pqw_A          110 VVLNSLAG---E----------A---------------IQRGVQILAP---GGRFIELGKKD  140 (198)
T ss_dssp             EEEECCCT---H----------H---------------HHHHHHTEEE---EEEEEECSCGG
T ss_pred             EEEECCch---H----------H---------------HHHHHHHhcc---CCEEEEEcCCC
Confidence            99999862   1          0               2345555554   57999988754

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=98.44  E-value=3.9e-07  Score=77.07  Aligned_cols=79  Identities=14%  Similarity=0.328  Sum_probs=56.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||||+++|||..+++.+...|++|+++.++.++. +.+ +.+...    ..+|.++.+++.+.+.++..  +++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~-~~~-~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d  216 (333)
T 1v3u_A          145 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYL-KQIGFD----AAFNYKTVNSLEEALKKASP--DGYD  216 (333)
T ss_dssp             SSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHH-HHH-HHTTCS----EEEETTSCSCHHHHHHHHCT--TCEE
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHH-HHH-HhcCCc----EEEecCCHHHHHHHHHHHhC--CCCe
Confidence            589999999999999999999999999988887765544 333 222221    23577763444444444432  5799


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|+|+|
T Consensus       217 ~vi~~~g  223 (333)
T 1v3u_A          217 CYFDNVG  223 (333)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999998

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=98.39  E-value=5.3e-08  Score=87.42  Aligned_cols=101  Identities=14%  Similarity=0.243  Sum_probs=62.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+|+++|||| ||+|++++..|++.|++|+++.|+.++. +.+.+.... .+  +  ++.|   +.++      ....
T Consensus       361 ~l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a-~~la~~~~~-~~--~--~~~d---l~~~------~~~~  424 (523)
T 2o7s_A          361 PLASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERA-LELAEAIGG-KA--L--SLTD---LDNY------HPED  424 (523)
T ss_dssp             -----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHH-HHHHHHTTC--C--E--ETTT---TTTC--------CC
T ss_pred             ccCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHcCC-ce--e--eHHH---hhhc------cccC
Confidence            578999999999 5999999999999999977777765544 444444322 21  1  2222   1000      1135


Q ss_pred             ccEEEEcCCCCCCC---CCCccCCCHHHHHHHHhhHHHHH
Q 041914           92 LDIMFSNAGILSSS---DQTVLDLDFSAFDRLFAINVRGM  128 (264)
Q Consensus        92 id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~  128 (264)
                      +|+||||+|+....   ..++.+.+.+.|..++++|+.+.
T Consensus       425 ~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~  464 (523)
T 2o7s_A          425 GMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPR  464 (523)
T ss_dssp             SEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSS
T ss_pred             ceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCc
Confidence            89999999975421   12555566677778888888765

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=98.38  E-value=2.3e-06  Score=71.56  Aligned_cols=85  Identities=15%  Similarity=0.212  Sum_probs=58.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCc--hhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQ--DELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ..++++|++||+|+ ||+|++++..|++.|+ +|.++.|+.  .+..+.+.+.+.. ..+.+...++.+.+++.+.+.  
T Consensus       149 ~~~l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~--  225 (315)
T 3tnl_A          149 GHDIIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA--  225 (315)
T ss_dssp             TCCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCCccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc--
Confidence            45689999999997 7999999999999999 677777772  2333444333321 122334456767665554443  


Q ss_pred             HHhcCCccEEEEcCCCC
Q 041914           86 VQNYGQLDIMFSNAGIL  102 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~  102 (264)
                           ..|+|||+.+..
T Consensus       226 -----~aDiIINaTp~G  237 (315)
T 3tnl_A          226 -----ESVIFTNATGVG  237 (315)
T ss_dssp             -----TCSEEEECSSTT
T ss_pred             -----CCCEEEECccCC
Confidence                 689999998764

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=98.36  E-value=8.1e-07  Score=74.90  Aligned_cols=104  Identities=16%  Similarity=0.234  Sum_probs=68.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||++++|..+++.+...|++|+++.++.++. +.+.+ +...    ..+|.++.+..+.+.+...  ..++|
T Consensus       140 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~-~~~~~-~g~~----~~~~~~~~~~~~~~~~~~~--~~~~D  211 (327)
T 1qor_A          140 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKA-QSALK-AGAW----QVINYREEDLVERLKEITG--GKKVR  211 (327)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHH-HTCS----EEEETTTSCHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-cCCC----EEEECCCccHHHHHHHHhC--CCCce
Confidence            589999999999999999999999999988887765443 33332 2221    2246666544444333221  13699


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ++|+|+| .  .  .                       .+.+++.++.   .|+++.+++..+
T Consensus       212 ~vi~~~g-~--~--~-----------------------~~~~~~~l~~---~G~iv~~g~~~~  243 (327)
T 1qor_A          212 VVYDSVG-R--D--T-----------------------WERSLDCLQR---RGLMVSFGNSSG  243 (327)
T ss_dssp             EEEECSC-G--G--G-----------------------HHHHHHTEEE---EEEEEECCCTTC
T ss_pred             EEEECCc-h--H--H-----------------------HHHHHHHhcC---CCEEEEEecCCC
Confidence            9999998 1  1  0                       2444555554   579999987644

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=98.34  E-value=1.6e-06  Score=76.52  Aligned_cols=81  Identities=14%  Similarity=0.217  Sum_probs=59.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++.+++++|+|+ |++|++++..|++. |.+|.++.|+.++. +.+.+.   ..+..+.+|+.|.+++.++++     
T Consensus        18 ~~~l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~~---~~~~~~~~D~~d~~~l~~~l~-----   87 (467)
T 2axq_A           18 EGRHMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANA-QALAKP---SGSKAISLDVTDDSALDKVLA-----   87 (467)
T ss_dssp             -----CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHGG---GTCEEEECCTTCHHHHHHHHH-----
T ss_pred             ccCCCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHHh---cCCcEEEEecCCHHHHHHHHc-----
Confidence            44678899999997 99999999999998 78877777765543 333332   135667899999888777665     


Q ss_pred             cCCccEEEEcCCCC
Q 041914           89 YGQLDIMFSNAGIL  102 (264)
Q Consensus        89 ~~~id~lv~~ag~~  102 (264)
                        ++|+|||+++..
T Consensus        88 --~~DvVIn~tp~~   99 (467)
T 2axq_A           88 --DNDVVISLIPYT   99 (467)
T ss_dssp             --TSSEEEECSCGG
T ss_pred             --CCCEEEECCchh
Confidence              689999999864

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=98.26  E-value=2.7e-06  Score=72.36  Aligned_cols=104  Identities=20%  Similarity=0.230  Sum_probs=71.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|+++++|..+++.+...|++|+++.++.++. +.+.+ ....    ...|.++.+++.+.+.++...  ++|
T Consensus       169 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~-~~~~~-~g~~----~~~d~~~~~~~~~~~~~~~~~--~~D  240 (347)
T 2hcy_A          169 AGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKE-ELFRS-IGGE----VFIDFTKEKDIVGAVLKATDG--GAH  240 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHH-HHHHH-TTCC----EEEETTTCSCHHHHHHHHHTS--CEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHH-HHHHH-cCCc----eEEecCccHhHHHHHHHHhCC--CCC
Confidence            589999999999999999999999999988888776554 33322 2221    234777555555555555433  799


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++|+++|..                           ..++.+++.|++   .|+++.+++..
T Consensus       241 ~vi~~~g~~---------------------------~~~~~~~~~l~~---~G~iv~~g~~~  272 (347)
T 2hcy_A          241 GVINVSVSE---------------------------AAIEASTRYVRA---NGTTVLVGMPA  272 (347)
T ss_dssp             EEEECSSCH---------------------------HHHHHHTTSEEE---EEEEEECCCCT
T ss_pred             EEEECCCcH---------------------------HHHHHHHHHHhc---CCEEEEEeCCC
Confidence            999998731                           023445555544   57999987654

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=98.24  E-value=2.1e-06  Score=62.92  Aligned_cols=78  Identities=14%  Similarity=0.260  Sum_probs=54.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.+++++|+|+ |.+|..+++.|.+.|++|+++.++.+.. +.+.   .. ....+..|.++.+.+.++      ...+
T Consensus         3 ~~~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~-~~~~---~~-~~~~~~~d~~~~~~l~~~------~~~~   70 (144)
T 2hmt_A            3 RIKNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-NAYA---SY-ATHAVIANATEENELLSL------GIRN   70 (144)
T ss_dssp             ---CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-HTTT---TT-CSEEEECCTTCHHHHHTT------TGGG
T ss_pred             CCcCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHH---Hh-CCEEEEeCCCCHHHHHhc------CCCC
Confidence            456788999998 9999999999999999988777754432 2111   11 235678899887655433      1246


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      .|++|++++.
T Consensus        71 ~d~vi~~~~~   80 (144)
T 2hmt_A           71 FEYVIVAIGA   80 (144)
T ss_dssp             CSEEEECCCS
T ss_pred             CCEEEECCCC
Confidence            8999998763

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=98.22  E-value=6.5e-06  Score=60.41  Aligned_cols=75  Identities=13%  Similarity=0.240  Sum_probs=56.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ..++++|+|+ |.+|.++++.|.++|++|+++.++++.. +.+.+.    .+.++..|.++++.++++      ...+.|
T Consensus         5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~-~~~~~~----~~~~~~gd~~~~~~l~~~------~~~~~d   72 (141)
T 3llv_A            5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKI-ELLEDE----GFDAVIADPTDESFYRSL------DLEGVS   72 (141)
T ss_dssp             -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHT----TCEEEECCTTCHHHHHHS------CCTTCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHH-HHHHHC----CCcEEECCCCCHHHHHhC------CcccCC
Confidence            4578999998 7899999999999999988888765543 333222    357788999999876654      124789


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|.+.+
T Consensus        73 ~vi~~~~   79 (141)
T 3llv_A           73 AVLITGS   79 (141)
T ss_dssp             EEEECCS
T ss_pred             EEEEecC
Confidence            9998765

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=98.16  E-value=4.7e-06  Score=70.39  Aligned_cols=80  Identities=15%  Similarity=0.252  Sum_probs=55.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|..+++.+...|++|+++.++.++. +.+.+ +...    ..+|.++.+..+++.+...  ..++|
T Consensus       145 ~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~-~g~~----~~~d~~~~~~~~~i~~~~~--~~~~d  216 (333)
T 1wly_A          145 PGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKA-ETARK-LGCH----HTINYSTQDFAEVVREITG--GKGVD  216 (333)
T ss_dssp             TTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-HTCS----EEEETTTSCHHHHHHHHHT--TCCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-cCCC----EEEECCCHHHHHHHHHHhC--CCCCe
Confidence            589999999999999999999999999988887765443 33332 2221    2246666544444333221  13699


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|+|+|.
T Consensus       217 ~vi~~~g~  224 (333)
T 1wly_A          217 VVYDSIGK  224 (333)
T ss_dssp             EEEECSCT
T ss_pred             EEEECCcH
Confidence            99999984

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=98.15  E-value=2.2e-06  Score=70.93  Aligned_cols=81  Identities=16%  Similarity=0.174  Sum_probs=53.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-C-cEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-G-KCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++++|+++|||++ |+|+++++.|++.| +|+++.|+.++. +.+.+.... . ....+.+|+++.          .+.
T Consensus       124 ~~l~~k~vlV~GaG-giG~aia~~L~~~G-~V~v~~r~~~~~-~~l~~~~~~~~~~~~~~~~d~~~~----------~~~  190 (287)
T 1nvt_A          124 GRVKDKNIVIYGAG-GAARAVAFELAKDN-NIIIANRTVEKA-EALAKEIAEKLNKKFGEEVKFSGL----------DVD  190 (287)
T ss_dssp             CCCCSCEEEEECCS-HHHHHHHHHHTSSS-EEEEECSSHHHH-HHHHHHHHHHHTCCHHHHEEEECT----------TCC
T ss_pred             CCcCCCEEEEECch-HHHHHHHHHHHHCC-CEEEEECCHHHH-HHHHHHHhhhcccccceeEEEeeH----------HHh
Confidence            46889999999997 99999999999999 877777765443 333332211 0 000112344431          334


Q ss_pred             cCCccEEEEcCCCCCC
Q 041914           89 YGQLDIMFSNAGILSS  104 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~  104 (264)
                      ++++|+||||+|....
T Consensus       191 ~~~~DilVn~ag~~~~  206 (287)
T 1nvt_A          191 LDGVDIIINATPIGMY  206 (287)
T ss_dssp             CTTCCEEEECSCTTCT
T ss_pred             hCCCCEEEECCCCCCC
Confidence            5789999999997653

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=98.12  E-value=3.6e-06  Score=71.39  Aligned_cols=80  Identities=19%  Similarity=0.357  Sum_probs=54.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|++|++|..+++.+...|++|+++.++.++. +.+.+.+...    ..+|.++.+++.+.+.++..  +++|
T Consensus       155 ~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~-~~~~~~~g~~----~~~d~~~~~~~~~~~~~~~~--~~~d  227 (345)
T 2j3h_A          155 EGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKV-DLLKTKFGFD----DAFNYKEESDLTAALKRCFP--NGID  227 (345)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTSCCS----EEEETTSCSCSHHHHHHHCT--TCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHcCCc----eEEecCCHHHHHHHHHHHhC--CCCc
Confidence            589999999999999999999999999987777765543 3333222221    22366654344444444322  4799


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|+|+|
T Consensus       228 ~vi~~~g  234 (345)
T 2j3h_A          228 IYFENVG  234 (345)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=98.10  E-value=8.2e-06  Score=66.92  Aligned_cols=78  Identities=9%  Similarity=0.100  Sum_probs=52.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++.+|+++|+|+ ||+|++++..|++.|++|+++.|+.++. +.+.+.... ..+.  ..|+   +++       .+  
T Consensus       115 ~~l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~-~~la~~~~~~~~~~--~~~~---~~~-------~~--  178 (271)
T 1nyt_A          115 FIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA-EELAKLFAHTGSIQ--ALSM---DEL-------EG--  178 (271)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH-HHHHHHTGGGSSEE--ECCS---GGG-------TT--
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHH-HHHHHHhhccCCee--EecH---HHh-------cc--
Confidence            4678999999998 7999999999999999877776665543 344433321 1221  2332   111       11  


Q ss_pred             CCccEEEEcCCCCCC
Q 041914           90 GQLDIMFSNAGILSS  104 (264)
Q Consensus        90 ~~id~lv~~ag~~~~  104 (264)
                      ++.|+||+|++....
T Consensus       179 ~~~DivVn~t~~~~~  193 (271)
T 1nyt_A          179 HEFDLIINATSSGIS  193 (271)
T ss_dssp             CCCSEEEECCSCGGG
T ss_pred             CCCCEEEECCCCCCC
Confidence            589999999997543

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=98.09  E-value=8.8e-06  Score=68.75  Aligned_cols=79  Identities=24%  Similarity=0.407  Sum_probs=53.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|++|++|..+++.+...|++|+++.++.++. +.+.+.+...    ...|.++.+..+.+.+ ..  .+++|
T Consensus       149 ~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~~~g~~----~~~~~~~~~~~~~~~~-~~--~~~~d  220 (336)
T 4b7c_A          149 NGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKC-RFLVEELGFD----GAIDYKNEDLAAGLKR-EC--PKGID  220 (336)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHTTCCS----EEEETTTSCHHHHHHH-HC--TTCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHHcCCC----EEEECCCHHHHHHHHH-hc--CCCce
Confidence            589999999999999999999999999988887766544 3332222221    2246655433333222 21  24799


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|+|+|
T Consensus       221 ~vi~~~g  227 (336)
T 4b7c_A          221 VFFDNVG  227 (336)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=98.08  E-value=8.7e-06  Score=69.31  Aligned_cols=79  Identities=13%  Similarity=0.206  Sum_probs=54.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|++|++|..+++.+...|++|+++.+++++.. .+. .+...    ..+|.++.+..+++.+...  ..++|
T Consensus       170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~-~~ga~----~~~d~~~~~~~~~~~~~~~--~~~~D  241 (351)
T 1yb5_A          170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQK-IVL-QNGAH----EVFNHREVNYIDKIKKYVG--EKGID  241 (351)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH-HTTCS----EEEETTSTTHHHHHHHHHC--TTCEE
T ss_pred             CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHH-HHH-HcCCC----EEEeCCCchHHHHHHHHcC--CCCcE
Confidence            5899999999999999999999999999888887655443 222 22221    2346666543333322221  12699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|+|+|
T Consensus       242 ~vi~~~G  248 (351)
T 1yb5_A          242 IIIEMLA  248 (351)
T ss_dssp             EEEESCH
T ss_pred             EEEECCC
Confidence            9999987

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=98.08  E-value=7.8e-06  Score=69.66  Aligned_cols=80  Identities=23%  Similarity=0.301  Sum_probs=54.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+||+|..+++.+...|++|+++.+++++. +.+. .+...    ..+|.++.+..+.+.+...  .+++|
T Consensus       162 ~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~-~~g~~----~~~~~~~~~~~~~~~~~~~--~~~~d  233 (354)
T 2j8z_A          162 AGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKL-QMAE-KLGAA----AGFNYKKEDFSEATLKFTK--GAGVN  233 (354)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHH-HHTCS----EEEETTTSCHHHHHHHHTT--TSCEE
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH-HcCCc----EEEecCChHHHHHHHHHhc--CCCce
Confidence            589999999999999999999999999988887765544 3332 22221    2346665433333322111  13699


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|+|+|.
T Consensus       234 ~vi~~~G~  241 (354)
T 2j8z_A          234 LILDCIGG  241 (354)
T ss_dssp             EEEESSCG
T ss_pred             EEEECCCc
Confidence            99999984

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=98.08  E-value=1.6e-05  Score=67.39  Aligned_cols=102  Identities=18%  Similarity=0.271  Sum_probs=67.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|+++||+|++|++|..+++.+...|++|+++.+++++. +.+.+ ....  .  .+|.++.+.    .+++.+..  .+
T Consensus       166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~-~~~~~-~ga~--~--~~d~~~~~~----~~~~~~~~~~~~  235 (343)
T 2eih_A          166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKL-RRAKA-LGAD--E--TVNYTHPDW----PKEVRRLTGGKG  235 (343)
T ss_dssp             TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-HTCS--E--EEETTSTTH----HHHHHHHTTTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHh-cCCC--E--EEcCCcccH----HHHHHHHhCCCC
Confidence            589999999999999999999999999988887765544 33322 2222  1  247665432    22233322  37


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      +|++|+++| . ..                          .+.+++.++.   .|+++.+++...
T Consensus       236 ~d~vi~~~g-~-~~--------------------------~~~~~~~l~~---~G~~v~~g~~~~  269 (343)
T 2eih_A          236 ADKVVDHTG-A-LY--------------------------FEGVIKATAN---GGRIAIAGASSG  269 (343)
T ss_dssp             EEEEEESSC-S-SS--------------------------HHHHHHHEEE---EEEEEESSCCCS
T ss_pred             ceEEEECCC-H-HH--------------------------HHHHHHhhcc---CCEEEEEecCCC
Confidence            999999998 2 11                          2444555554   579999887654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=98.07  E-value=6.9e-06  Score=70.06  Aligned_cols=79  Identities=16%  Similarity=0.368  Sum_probs=53.0

Q ss_pred             CC--cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EG--KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~--k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .|  +++||+|++||+|..+++.+...|+ +|+++.++.++. +.+.+.+...    ..+|.++.+..+. +.+...  +
T Consensus       158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~-~~~~~~~g~~----~~~d~~~~~~~~~-~~~~~~--~  229 (357)
T 2zb4_A          158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKC-ILLTSELGFD----AAINYKKDNVAEQ-LRESCP--A  229 (357)
T ss_dssp             TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHHHTSCCS----EEEETTTSCHHHH-HHHHCT--T
T ss_pred             CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHH-HHHHHHcCCc----eEEecCchHHHHH-HHHhcC--C
Confidence            46  9999999999999999999999999 887777765443 3333322221    2356665432222 222211  2


Q ss_pred             CccEEEEcCC
Q 041914           91 QLDIMFSNAG  100 (264)
Q Consensus        91 ~id~lv~~ag  100 (264)
                      ++|++|+|+|
T Consensus       230 ~~d~vi~~~G  239 (357)
T 2zb4_A          230 GVDVYFDNVG  239 (357)
T ss_dssp             CEEEEEESCC
T ss_pred             CCCEEEECCC
Confidence            6999999998

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=98.06  E-value=3.6e-05  Score=57.29  Aligned_cols=78  Identities=14%  Similarity=0.215  Sum_probs=57.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+.++|.|+ |.+|+.+++.|.+.|++|+++.++.++..+.+.+.... .+.++..|.++++.+.++      ...+.|.
T Consensus         3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~-~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (153)
T 1id1_A            3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGD-NADVIPGDSNDSSVLKKA------GIDRCRA   74 (153)
T ss_dssp             CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCT-TCEEEESCTTSHHHHHHH------TTTTCSE
T ss_pred             CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcC-CCeEEEcCCCCHHHHHHc------ChhhCCE
Confidence            567889986 99999999999999999988888754433344333322 467889999998876554      1236899


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      +|.+.+
T Consensus        75 vi~~~~   80 (153)
T 1id1_A           75 ILALSD   80 (153)
T ss_dssp             EEECSS
T ss_pred             EEEecC
Confidence            987764

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=98.04  E-value=2.6e-05  Score=65.06  Aligned_cols=86  Identities=14%  Similarity=0.198  Sum_probs=54.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCc--hhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQ--DELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ..++.+|++||+|+ ||.|++++..|++.|+ +|.++.|+.  .+..+.+.+.+.. ........++.+.+...+.+.  
T Consensus       143 ~~~l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~--  219 (312)
T 3t4e_A          143 GFDMRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA--  219 (312)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCCcCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc--
Confidence            35688999999997 8999999999999999 566666762  2223333333221 112233445555433232222  


Q ss_pred             HHhcCCccEEEEcCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILS  103 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~  103 (264)
                           ..|+|||+.+..-
T Consensus       220 -----~~DiIINaTp~Gm  232 (312)
T 3t4e_A          220 -----SADILTNGTKVGM  232 (312)
T ss_dssp             -----HCSEEEECSSTTS
T ss_pred             -----CceEEEECCcCCC
Confidence                 4699999987653

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=98.02  E-value=2.6e-05  Score=65.77  Aligned_cols=150  Identities=10%  Similarity=0.009  Sum_probs=89.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCc---hhhHHH-HHhhhCCC-cEEEEEecCCCHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-------RMIVIADIQ---DELGRQ-VATSIGVG-KCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~---~~~~~~-~~~~~~~~-~~~~~~~D~s~~~~~~~~~   82 (264)
                      ..+++||||+|.+|.+++..|+..|.       +++++.+..   ++..+. ..+..... .+.   .|+....+...++
T Consensus         5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~~---~~i~~~~~~~~al   81 (329)
T 1b8p_A            5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPLL---AGMTAHADPMTAF   81 (329)
T ss_dssp             CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTTE---EEEEEESSHHHHT
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhccccc---CcEEEecCcHHHh
Confidence            35799999999999999999999885       555554441   322222 22222211 111   2333222233333


Q ss_pred             HHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC------
Q 041914           83 DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG------  156 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~------  156 (264)
                             .+.|++||.||.....     ..+.   .+.+..|+.....+.+.+..+-   +..+++|++|.-..      
T Consensus        82 -------~~aD~Vi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i~~~~---~p~a~ii~~SNPv~~~t~~~  143 (329)
T 1b8p_A           82 -------KDADVALLVGARPRGP-----GMER---KDLLEANAQIFTVQGKAIDAVA---SRNIKVLVVGNPANTNAYIA  143 (329)
T ss_dssp             -------TTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHHHHHS---CTTCEEEECSSSHHHHHHHH
T ss_pred             -------CCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHHHHhc---CCCeEEEEccCchHHHHHHH
Confidence                   3789999999975422     1232   3567888887777776664421   13678999986442      


Q ss_pred             --CC-CCCCCchhhchHHHHHHHHHHHHHHhC
Q 041914          157 --SC-GGKRRTDYHMSKHAVIGLVRSASVQLG  185 (264)
Q Consensus       157 --~~-~~~~~~~y~~sK~al~~~~~~la~e~~  185 (264)
                        .. ..|..-.|+.++.--..+...++..+.
T Consensus       144 ~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          144 MKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence              11 233434588877666667777777764

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=98.01  E-value=1.8e-05  Score=67.74  Aligned_cols=75  Identities=16%  Similarity=0.283  Sum_probs=51.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc---hhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ---DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++|+++||+|+ |++|..+++.+...|++|+++.++.   ++. +.+. .+.   ...+  | .+  ++.+.+.+ ..  
T Consensus       179 ~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~~-~~g---a~~v--~-~~--~~~~~~~~-~~--  244 (366)
T 2cdc_A          179 LNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQ-TVIE-ETK---TNYY--N-SS--NGYDKLKD-SV--  244 (366)
T ss_dssp             STTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHH-HHHH-HHT---CEEE--E-CT--TCSHHHHH-HH--
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHH-HHHH-HhC---Ccee--c-hH--HHHHHHHH-hC--
Confidence            44999999999 9999999999999999988888776   443 3222 222   2223  5 44  22222222 22  


Q ss_pred             CCccEEEEcCCC
Q 041914           90 GQLDIMFSNAGI  101 (264)
Q Consensus        90 ~~id~lv~~ag~  101 (264)
                      +++|++|+++|.
T Consensus       245 ~~~d~vid~~g~  256 (366)
T 2cdc_A          245 GKFDVIIDATGA  256 (366)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999984

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=97.91  E-value=2.9e-05  Score=65.91  Aligned_cols=80  Identities=11%  Similarity=0.228  Sum_probs=53.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++||+|+++++|..+++.+... |++|+++.+++++. +.+.+ +...    ...|.++.+..+.+ .++... +++
T Consensus       170 ~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~-~~~~~-~g~~----~~~~~~~~~~~~~~-~~~~~~-~~~  241 (347)
T 1jvb_A          170 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAV-EAAKR-AGAD----YVINASMQDPLAEI-RRITES-KGV  241 (347)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHH-HHHHH-HTCS----EEEETTTSCHHHHH-HHHTTT-SCE
T ss_pred             CCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHHH-hCCC----EEecCCCccHHHHH-HHHhcC-CCc
Confidence            5899999999999999999999999 99987777765543 33322 2221    22355554332222 222111 479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|+|+|.
T Consensus       242 d~vi~~~g~  250 (347)
T 1jvb_A          242 DAVIDLNNS  250 (347)
T ss_dssp             EEEEESCCC
T ss_pred             eEEEECCCC
Confidence            999999984

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=97.89  E-value=4.7e-05  Score=64.75  Aligned_cols=79  Identities=24%  Similarity=0.355  Sum_probs=54.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|..+++.+...|++|+++.++.++. +.+.+ +...  .  ..|..+.+..+.+.+ ..  .+++|
T Consensus       167 ~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~-lGa~--~--~~~~~~~~~~~~~~~-~~--~~g~D  237 (353)
T 4dup_A          167 EGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKC-EACER-LGAK--R--GINYRSEDFAAVIKA-ET--GQGVD  237 (353)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-HTCS--E--EEETTTSCHHHHHHH-HH--SSCEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHh-cCCC--E--EEeCCchHHHHHHHH-Hh--CCCce
Confidence            589999999999999999999999999988888776654 33332 2222  1  235555433333332 22  35799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|+|+|.
T Consensus       238 vvid~~g~  245 (353)
T 4dup_A          238 IILDMIGA  245 (353)
T ss_dssp             EEEESCCG
T ss_pred             EEEECCCH
Confidence            99999983

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=97.80  E-value=4.2e-05  Score=64.53  Aligned_cols=102  Identities=18%  Similarity=0.318  Sum_probs=67.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|+++||+||+|++|...++.+...|++|+++.++.++.. .+. .+...    ...|..+.+..+    ++.+..  .+
T Consensus       148 ~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~-~~ga~----~~~~~~~~~~~~----~~~~~~~~~g  217 (334)
T 3qwb_A          148 KGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLK-IAK-EYGAE----YLINASKEDILR----QVLKFTNGKG  217 (334)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHH-HHH-HTTCS----EEEETTTSCHHH----HHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHH-HcCCc----EEEeCCCchHHH----HHHHHhCCCC
Confidence            5899999999999999999999999999888887655443 332 23222    123555433322    333322  36


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      +|++|+|+|.  .                          ..+.+++.++.   .|+++.++...+
T Consensus       218 ~D~vid~~g~--~--------------------------~~~~~~~~l~~---~G~iv~~G~~~~  251 (334)
T 3qwb_A          218 VDASFDSVGK--D--------------------------TFEISLAALKR---KGVFVSFGNASG  251 (334)
T ss_dssp             EEEEEECCGG--G--------------------------GHHHHHHHEEE---EEEEEECCCTTC
T ss_pred             ceEEEECCCh--H--------------------------HHHHHHHHhcc---CCEEEEEcCCCC
Confidence            9999999984  1                          12344555554   579999876543

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=97.80  E-value=4.7e-05  Score=64.00  Aligned_cols=78  Identities=15%  Similarity=0.295  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|+++||+||+|++|...++.+...|++|+++.+++++. +.+.+ +...    ...|.++.+..+    .+.+..  .+
T Consensus       140 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~-~Ga~----~~~~~~~~~~~~----~~~~~~~~~g  209 (325)
T 3jyn_A          140 PGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKA-AHAKA-LGAW----ETIDYSHEDVAK----RVLELTDGKK  209 (325)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHH-HTCS----EEEETTTSCHHH----HHHHHTTTCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHH-cCCC----EEEeCCCccHHH----HHHHHhCCCC
Confidence            589999999999999999999999999988888766544 33332 2221    123555443333    333322  26


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|+|+|.
T Consensus       210 ~Dvvid~~g~  219 (325)
T 3jyn_A          210 CPVVYDGVGQ  219 (325)
T ss_dssp             EEEEEESSCG
T ss_pred             ceEEEECCCh
Confidence            9999999984

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=97.80  E-value=0.00014  Score=59.59  Aligned_cols=77  Identities=8%  Similarity=0.112  Sum_probs=51.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++++|+++|+|+ ||+|++++..|++.|++|.+..|+.++. +.+.+.... ..+..  .|+.   ++.       +  
T Consensus       115 ~~~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a-~~l~~~~~~~~~~~~--~~~~---~~~-------~--  178 (272)
T 1p77_A          115 WLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT-KELAERFQPYGNIQA--VSMD---SIP-------L--  178 (272)
T ss_dssp             CCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH-HHHHHHHGGGSCEEE--EEGG---GCC-------C--
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHccccCCeEE--eeHH---Hhc-------c--
Confidence            4678999999998 8999999999999998877777765544 334333321 12222  2321   110       1  


Q ss_pred             CCccEEEEcCCCCC
Q 041914           90 GQLDIMFSNAGILS  103 (264)
Q Consensus        90 ~~id~lv~~ag~~~  103 (264)
                      +..|+||++++...
T Consensus       179 ~~~DivIn~t~~~~  192 (272)
T 1p77_A          179 QTYDLVINATSAGL  192 (272)
T ss_dssp             SCCSEEEECCCC--
T ss_pred             CCCCEEEECCCCCC
Confidence            47899999998754

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.79  E-value=0.0001  Score=53.47  Aligned_cols=75  Identities=20%  Similarity=0.309  Sum_probs=52.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +++++|+|+ |.+|..+++.|.+.|++|+++.++.+.. +.+.+..   .+.++..|.++.+.+.+.      ...+.|+
T Consensus         4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~-~~~~~~~---~~~~~~~d~~~~~~l~~~------~~~~~d~   72 (140)
T 1lss_A            4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-KKASAEI---DALVINGDCTKIKTLEDA------GIEDADM   72 (140)
T ss_dssp             -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHC---SSEEEESCTTSHHHHHHT------TTTTCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-HHHHHhc---CcEEEEcCCCCHHHHHHc------CcccCCE
Confidence            357899987 9999999999999999988887765433 3332221   245677898887654321      1246899


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      +|++.+
T Consensus        73 vi~~~~   78 (140)
T 1lss_A           73 YIAVTG   78 (140)
T ss_dssp             EEECCS
T ss_pred             EEEeeC
Confidence            999864

>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A

Probab=97.79  E-value=0.00041  Score=58.28  Aligned_cols=113  Identities=19%  Similarity=0.196  Sum_probs=67.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCC---CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           16 KVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGV---GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+++||||+|.+|..++..|++.|  .+|+++....+ . ....+....   ..+..    +.+.++..++++       
T Consensus         9 mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~-~-~~~~dL~~~~~~~~v~~----~~~t~d~~~al~-------   75 (326)
T 1smk_A            9 FKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA-P-GVTADISHMDTGAVVRG----FLGQQQLEAALT-------   75 (326)
T ss_dssp             EEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH-H-HHHHHHHTSCSSCEEEE----EESHHHHHHHHT-------
T ss_pred             CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc-H-hHHHHhhcccccceEEE----EeCCCCHHHHcC-------
Confidence            579999999999999999999988  77666654443 2 111112111   12222    223344444433       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      +.|++|+++|......     .+.   .+.+..|+..+..+.+.+..    ...++.++++|.
T Consensus        76 gaDvVi~~ag~~~~~g-----~~r---~dl~~~N~~~~~~i~~~i~~----~~p~~~viv~SN  126 (326)
T 1smk_A           76 GMDLIIVPAGVPRKPG-----MTR---DDLFKINAGIVKTLCEGIAK----CCPRAIVNLISN  126 (326)
T ss_dssp             TCSEEEECCCCCCCSS-----CCC---SHHHHHHHHHHHHHHHHHHH----HCTTSEEEECCS
T ss_pred             CCCEEEEcCCcCCCCC-----CCH---HHHHHHHHHHHHHHHHHHHh----hCCCeEEEEECC
Confidence            7899999999654321     111   24477888877777766644    332455555543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=97.75  E-value=6.9e-05  Score=63.37  Aligned_cols=78  Identities=15%  Similarity=0.161  Sum_probs=53.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|+++||+|+++++|...++.+...|++|+++.++.++.. .+.+ +...  .  ..|..+.+..+    .+.+..  .+
T Consensus       144 ~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~-~~~~-lga~--~--~~~~~~~~~~~----~~~~~~~~~g  213 (340)
T 3gms_A          144 RNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTE-ELLR-LGAA--Y--VIDTSTAPLYE----TVMELTNGIG  213 (340)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHH-HTCS--E--EEETTTSCHHH----HHHHHTTTSC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHH-HHHh-CCCc--E--EEeCCcccHHH----HHHHHhCCCC
Confidence            5899999999999999999988889999888887766543 3332 2222  1  23555433222    233222  26


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|+|+|.
T Consensus       214 ~Dvvid~~g~  223 (340)
T 3gms_A          214 ADAAIDSIGG  223 (340)
T ss_dssp             EEEEEESSCH
T ss_pred             CcEEEECCCC
Confidence            9999999874

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=97.75  E-value=4e-05  Score=65.86  Aligned_cols=78  Identities=19%  Similarity=0.287  Sum_probs=53.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.+++++|+|+ |++|..+++.+...|++|+++.++.++. +.+.+.... .+   ..+.++..++.+++.       .
T Consensus       165 ~l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l-~~~~~~~g~-~~---~~~~~~~~~l~~~l~-------~  231 (377)
T 2vhw_A          165 GVEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKL-RQLDAEFCG-RI---HTRYSSAYELEGAVK-------R  231 (377)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHTTT-SS---EEEECCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhcCC-ee---EeccCCHHHHHHHHc-------C
Confidence            578999999998 9999999999999999977777665543 333332222 11   233445555544443       5


Q ss_pred             ccEEEEcCCCC
Q 041914           92 LDIMFSNAGIL  102 (264)
Q Consensus        92 id~lv~~ag~~  102 (264)
                      .|++|++++..
T Consensus       232 aDvVi~~~~~p  242 (377)
T 2vhw_A          232 ADLVIGAVLVP  242 (377)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            79999988753

>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1

Probab=97.73  E-value=4e-05  Score=63.64  Aligned_cols=38  Identities=21%  Similarity=0.400  Sum_probs=32.9

Q ss_pred             cCCCcE-EEEeCCC------------------ChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           12 KLEGKV-AIITGGA------------------SGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        12 ~l~~k~-vlItGas------------------~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ++.||+ ||||+|.                  |.+|.++|++++++|+.|+++++..
T Consensus        33 ~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~   89 (313)
T 1p9o_A           33 GAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR   89 (313)
T ss_dssp             HHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred             hhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence            578888 9999875                  4499999999999999999998854

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=97.72  E-value=0.00011  Score=60.40  Aligned_cols=81  Identities=16%  Similarity=0.213  Sum_probs=52.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .++++|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++. +.+.+....  ..+.....++.+.   .+.+.    
T Consensus       123 ~~l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a-~~la~~~~~~~~~~~i~~~~~~~l---~~~l~----  193 (283)
T 3jyo_A          123 PNAKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRA-QALADVINNAVGREAVVGVDARGI---EDVIA----  193 (283)
T ss_dssp             TTCCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHH-HHHHHHHHHHHTSCCEEEECSTTH---HHHHH----
T ss_pred             cCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHH-HHHHHHHHhhcCCceEEEcCHHHH---HHHHh----
Confidence            4688999999998 8999999999999999 466666665544 333333221  1122333444332   22222    


Q ss_pred             hcCCccEEEEcCCCCC
Q 041914           88 NYGQLDIMFSNAGILS  103 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~  103 (264)
                         ..|+|||+.+...
T Consensus       194 ---~~DiVInaTp~Gm  206 (283)
T 3jyo_A          194 ---AADGVVNATPMGM  206 (283)
T ss_dssp             ---HSSEEEECSSTTS
T ss_pred             ---cCCEEEECCCCCC
Confidence               4699999987643

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=97.71  E-value=0.00011  Score=64.56  Aligned_cols=85  Identities=19%  Similarity=0.353  Sum_probs=57.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEE-EEEecCC---------CHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCH-YVHCDVT---------NECQVKALVD   83 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~s---------~~~~~~~~~~   83 (264)
                      .|++|||+|++|++|...++.+...|++|+++.++.++. +.+. .+....+. .-..|+.         +.++...+.+
T Consensus       220 ~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~-~~~~-~lGa~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  297 (447)
T 4a0s_A          220 QGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKE-AAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAK  297 (447)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH-HTTCCCEEEHHHHTCCTTGGGCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHH-hcCCCEEEecccccccccccccccccchhhhHHHH
Confidence            589999999999999999999999999988887655443 3332 23222211 1112221         2345566667


Q ss_pred             HHHHhcC-CccEEEEcCC
Q 041914           84 STVQNYG-QLDIMFSNAG  100 (264)
Q Consensus        84 ~~~~~~~-~id~lv~~ag  100 (264)
                      ++.+..+ ++|++|+++|
T Consensus       298 ~v~~~~g~g~Dvvid~~G  315 (447)
T 4a0s_A          298 LVVEKAGREPDIVFEHTG  315 (447)
T ss_dssp             HHHHHHSSCCSEEEECSC
T ss_pred             HHHHHhCCCceEEEECCC
Confidence            7766554 6999999988

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=97.69  E-value=0.00018  Score=60.76  Aligned_cols=101  Identities=15%  Similarity=0.200  Sum_probs=65.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|+ |++|..+++.+...|++|+++.+++++. +.+.+ +...    ...|.++.+ +.+.+.++.   +++|
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~-lGa~----~~~d~~~~~-~~~~~~~~~---~~~d  232 (339)
T 1rjw_A          164 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL-ELAKE-LGAD----LVVNPLKED-AAKFMKEKV---GGVH  232 (339)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHH-TTCS----EEECTTTSC-HHHHHHHHH---SSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHH-CCCC----EEecCCCcc-HHHHHHHHh---CCCC
Confidence            5899999999 8899999999999999987777765544 33322 2222    124666532 222222222   5799


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++|+++|..                           ..++.+++.+++   .|+++.+++..
T Consensus       233 ~vid~~g~~---------------------------~~~~~~~~~l~~---~G~~v~~g~~~  264 (339)
T 1rjw_A          233 AAVVTAVSK---------------------------PAFQSAYNSIRR---GGACVLVGLPP  264 (339)
T ss_dssp             EEEESSCCH---------------------------HHHHHHHHHEEE---EEEEEECCCCS
T ss_pred             EEEECCCCH---------------------------HHHHHHHHHhhc---CCEEEEecccC
Confidence            999998731                           023455555655   57999887654

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=97.67  E-value=0.0002  Score=53.29  Aligned_cols=80  Identities=19%  Similarity=0.231  Sum_probs=54.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +-+..+++++|.|+ |.+|..+++.|.+.|++|+++.++.+.... +..   ......+..|..+.+.+.++      ..
T Consensus        14 ~~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~-~~~---~~g~~~~~~d~~~~~~l~~~------~~   82 (155)
T 2g1u_A           14 SKKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHR-LNS---EFSGFTVVGDAAEFETLKEC------GM   82 (155)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGG-SCT---TCCSEEEESCTTSHHHHHTT------TG
T ss_pred             hcccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHH-HHh---cCCCcEEEecCCCHHHHHHc------Cc
Confidence            34567889999996 999999999999999998888877654321 110   11345677888876544321      12


Q ss_pred             CCccEEEEcCC
Q 041914           90 GQLDIMFSNAG  100 (264)
Q Consensus        90 ~~id~lv~~ag  100 (264)
                      .+.|++|.+.+
T Consensus        83 ~~ad~Vi~~~~   93 (155)
T 2g1u_A           83 EKADMVFAFTN   93 (155)
T ss_dssp             GGCSEEEECSS
T ss_pred             ccCCEEEEEeC
Confidence            36899998865

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=97.65  E-value=0.00029  Score=59.75  Aligned_cols=79  Identities=20%  Similarity=0.211  Sum_probs=52.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ++++||+||+|++|...++.+...|++|+++.++.++.. .+.+ +..+  .  ..|..+.+..+.+.+....  .++|+
T Consensus       165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~~-~Ga~--~--~~~~~~~~~~~~v~~~~~~--~g~D~  236 (349)
T 3pi7_A          165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIA-LLKD-IGAA--H--VLNEKAPDFEATLREVMKA--EQPRI  236 (349)
T ss_dssp             CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHH-HHHH-HTCS--E--EEETTSTTHHHHHHHHHHH--HCCCE
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH-cCCC--E--EEECCcHHHHHHHHHHhcC--CCCcE
Confidence            489999999999999999998899999888887666543 2322 3222  1  2355543333333322222  27999


Q ss_pred             EEEcCCC
Q 041914           95 MFSNAGI  101 (264)
Q Consensus        95 lv~~ag~  101 (264)
                      +|.++|.
T Consensus       237 vid~~g~  243 (349)
T 3pi7_A          237 FLDAVTG  243 (349)
T ss_dssp             EEESSCH
T ss_pred             EEECCCC
Confidence            9999873

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=97.63  E-value=0.00022  Score=60.91  Aligned_cols=75  Identities=19%  Similarity=0.291  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|+ |++|...++.+...|++|+++.+++++... +.+.+...  .  ..|..+.+.+.       +..+.+|
T Consensus       187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~-~~~~lGa~--~--v~~~~~~~~~~-------~~~~~~D  253 (366)
T 1yqd_A          187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEE-ALKNFGAD--S--FLVSRDQEQMQ-------AAAGTLD  253 (366)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHH-HHHTSCCS--E--EEETTCHHHHH-------HTTTCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHHhcCCc--e--EEeccCHHHHH-------HhhCCCC
Confidence            6899999996 999999999998999998888776655432 22222222  1  23666654332       2235799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       254 ~vid~~g~  261 (366)
T 1yqd_A          254 GIIDTVSA  261 (366)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCc
Confidence            99999985

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=97.62  E-value=0.00018  Score=60.87  Aligned_cols=77  Identities=18%  Similarity=0.359  Sum_probs=52.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-C-C
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-G-Q   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~-~   91 (264)
                      .|+++||+|++|++|...++.+...|++|+++.++.++. +.+.+ +...  ..+  |..  ++   +.+++.+.. + +
T Consensus       159 ~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~-~~~~~-~ga~--~v~--~~~--~~---~~~~v~~~~~~~g  227 (342)
T 4eye_A          159 AGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAAT-EFVKS-VGAD--IVL--PLE--EG---WAKAVREATGGAG  227 (342)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGH-HHHHH-HTCS--EEE--ESS--TT---HHHHHHHHTTTSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHh-cCCc--EEe--cCc--hh---HHHHHHHHhCCCC
Confidence            589999999999999999999999999988888876654 33332 2222  223  333  12   233333333 2 6


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|+|+|.
T Consensus       228 ~Dvvid~~g~  237 (342)
T 4eye_A          228 VDMVVDPIGG  237 (342)
T ss_dssp             EEEEEESCC-
T ss_pred             ceEEEECCch
Confidence            9999999984

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=97.61  E-value=0.00017  Score=63.57  Aligned_cols=85  Identities=18%  Similarity=0.277  Sum_probs=59.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEE-Eec--------CCCHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV-HCD--------VTNECQVKALVDS   84 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~D--------~s~~~~~~~~~~~   84 (264)
                      .|++|||+|++|++|...++.+...|++|+++.++.++. +.+.+ +....+.-. ..|        .++.++.+.+.++
T Consensus       228 ~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~-~~~~~-lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~  305 (456)
T 3krt_A          228 QGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA-EICRA-MGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKR  305 (456)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-HTCCEEEETTTTTCCSEEETTEECHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHH-HHHHh-hCCcEEEecCcCcccccccccccchHHHHHHHHH
Confidence            589999999999999999998888999988888654443 33332 322211100 111        2456777777888


Q ss_pred             HHHhcC--CccEEEEcCC
Q 041914           85 TVQNYG--QLDIMFSNAG  100 (264)
Q Consensus        85 ~~~~~~--~id~lv~~ag  100 (264)
                      +++..+  ++|++|.++|
T Consensus       306 i~~~t~g~g~Dvvid~~G  323 (456)
T 3krt_A          306 IRELTGGEDIDIVFEHPG  323 (456)
T ss_dssp             HHHHHTSCCEEEEEECSC
T ss_pred             HHHHhCCCCCcEEEEcCC
Confidence            877553  7999999987

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=97.61  E-value=0.00031  Score=57.73  Aligned_cols=77  Identities=13%  Similarity=0.241  Sum_probs=51.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++.+|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++. +.+.+.... ..+.....+  +   +       . 
T Consensus       121 ~~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a-~~la~~~~~~~~~~~~~~~--~---l-------~-  185 (281)
T 3o8q_A          121 QVLLKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKA-EQLAELVAAYGEVKAQAFE--Q---L-------K-  185 (281)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHH-HHHHHHHGGGSCEEEEEGG--G---C-------C-
T ss_pred             CCCccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHH-HHHHHHhhccCCeeEeeHH--H---h-------c-
Confidence            34678999999998 7999999999999997 766666665544 444443322 234444322  1   0       0 


Q ss_pred             hcCCccEEEEcCCCCC
Q 041914           88 NYGQLDIMFSNAGILS  103 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~  103 (264)
                        ...|+||++.+...
T Consensus       186 --~~aDiIInaTp~gm  199 (281)
T 3o8q_A          186 --QSYDVIINSTSASL  199 (281)
T ss_dssp             --SCEEEEEECSCCCC
T ss_pred             --CCCCEEEEcCcCCC
Confidence              36899999987653

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=97.50  E-value=0.0015  Score=55.56  Aligned_cols=83  Identities=12%  Similarity=0.090  Sum_probs=54.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++||+|+ |++|...++.....|++ |+++.+++++. +.+.+.  ...+..+..|-.+.+++.+.+.++.. ..++
T Consensus       179 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~~l--~~~~~~~~~~~~~~~~~~~~v~~~t~-g~g~  253 (363)
T 3m6i_A          179 LGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRL-KFAKEI--CPEVVTHKVERLSAEESAKKIVESFG-GIEP  253 (363)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHH-HHHHHH--CTTCEEEECCSCCHHHHHHHHHHHTS-SCCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHHh--chhcccccccccchHHHHHHHHHHhC-CCCC
Confidence            5889999998 99999999888888998 66666655443 333333  33444555565555554433333221 1369


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.++|.
T Consensus       254 Dvvid~~g~  262 (363)
T 3m6i_A          254 AVALECTGV  262 (363)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=97.49  E-value=0.00048  Score=58.75  Aligned_cols=78  Identities=17%  Similarity=0.294  Sum_probs=52.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .+.+++++|+|+ |++|+++++.+...|++|+++.|+.++. +.+.+.... .+..   +..+.+++.+.+.       .
T Consensus       164 ~l~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~-~~~~~~~~~-~~~~---~~~~~~~~~~~~~-------~  230 (361)
T 1pjc_A          164 GVKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLFGS-RVEL---LYSNSAEIETAVA-------E  230 (361)
T ss_dssp             TBCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHGG-GSEE---EECCHHHHHHHHH-------T
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHH-HHHHHhhCc-eeEe---eeCCHHHHHHHHc-------C
Confidence            367899999999 9999999999999999877777765544 333332211 2211   2233444433322       6


Q ss_pred             ccEEEEcCCCC
Q 041914           92 LDIMFSNAGIL  102 (264)
Q Consensus        92 id~lv~~ag~~  102 (264)
                      .|++|++++..
T Consensus       231 ~DvVI~~~~~~  241 (361)
T 1pjc_A          231 ADLLIGAVLVP  241 (361)
T ss_dssp             CSEEEECCCCT
T ss_pred             CCEEEECCCcC
Confidence            89999999864

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=97.49  E-value=0.00067  Score=57.44  Aligned_cols=102  Identities=17%  Similarity=0.232  Sum_probs=65.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--C
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--G   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~   90 (264)
                      .|+++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+...  ..  .|..+.+    +.+++.+..  .
T Consensus       167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~-~~Ga~--~~--~~~~~~~----~~~~v~~~~~g~  235 (348)
T 2d8a_A          167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRR-ELAK-KVGAD--YV--INPFEED----VVKEVMDITDGN  235 (348)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-HHHH-HHTCS--EE--ECTTTSC----HHHHHHHHTTTS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH-HhCCC--EE--ECCCCcC----HHHHHHHHcCCC
Confidence            7899999999 9999999998888999 887777765443 3222 22221  12  3554432    223333322  2


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      .+|++|.++|..                           ..++.+++.++.   .|+++.+++...
T Consensus       236 g~D~vid~~g~~---------------------------~~~~~~~~~l~~---~G~iv~~g~~~~  271 (348)
T 2d8a_A          236 GVDVFLEFSGAP---------------------------KALEQGLQAVTP---AGRVSLLGLYPG  271 (348)
T ss_dssp             CEEEEEECSCCH---------------------------HHHHHHHHHEEE---EEEEEECCCCSS
T ss_pred             CCCEEEECCCCH---------------------------HHHHHHHHHHhc---CCEEEEEccCCC
Confidence            699999998731                           123455566654   579999887543

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.49  E-value=0.00033  Score=58.09  Aligned_cols=79  Identities=13%  Similarity=0.201  Sum_probs=51.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++.+++++|+|+ ||+|++++..|++.|+ +|.+..|+.++ .+.+.+......-..+     +.++       +.+..
T Consensus       137 ~~l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~k-a~~la~~~~~~~~~~~-----~~~~-------~~~~~  202 (297)
T 2egg_A          137 ITLDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEK-AERLVREGDERRSAYF-----SLAE-------AETRL  202 (297)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHH-HHHHHHHSCSSSCCEE-----CHHH-------HHHTG
T ss_pred             CCCCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHH-HHHHHHHhhhccCcee-----eHHH-------HHhhh
Confidence            3678999999998 7999999999999998 66666665444 3444444322100111     1222       22233


Q ss_pred             CCccEEEEcCCCCC
Q 041914           90 GQLDIMFSNAGILS  103 (264)
Q Consensus        90 ~~id~lv~~ag~~~  103 (264)
                      ...|+||++.+...
T Consensus       203 ~~aDivIn~t~~~~  216 (297)
T 2egg_A          203 AEYDIIINTTSVGM  216 (297)
T ss_dssp             GGCSEEEECSCTTC
T ss_pred             ccCCEEEECCCCCC
Confidence            47899999998754

>1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A*

Probab=97.49  E-value=0.00011  Score=61.57  Aligned_cols=145  Identities=12%  Similarity=0.094  Sum_probs=81.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcE-EEEecC--chhhHH----HHHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           17 VAIITGGASGIGETTARLFADHGARM-IVIADI--QDELGR----QVATSIGV--GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v-~~~~~~--~~~~~~----~~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +++||||+|.+|.+++..|+..|... +.+.+.  .++..+    .+.+....  ..+.+...|    +++.       +
T Consensus         2 KI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~----d~l~-------~   70 (313)
T 1hye_A            2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVES----DENL-------R   70 (313)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEE----TTCG-------G
T ss_pred             EEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHHhcCCCeEEEeCC----cchH-------H
Confidence            68999999999999999999887522 444444  222111    12211110  112222211    0111       1


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC--------CC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS--------CG  159 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~--------~~  159 (264)
                      .+.+.|++||.||.....     ..+   -.+.+..|+..+..+.+.+..    .. ++.++++|.-...        .+
T Consensus        71 al~gaD~Vi~~Ag~~~~~-----g~~---r~dl~~~N~~i~~~i~~~i~~----~~-~~~vlv~SNPv~~~t~~~~k~~~  137 (313)
T 1hye_A           71 IIDESDVVIITSGVPRKE-----GMS---RMDLAKTNAKIVGKYAKKIAE----IC-DTKIFVITNPVDVMTYKALVDSK  137 (313)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCC---HHHHHHHHHHHHHHHHHHHHH----HC-CCEEEECSSSHHHHHHHHHHHHC
T ss_pred             HhCCCCEEEECCCCCCCC-----CCc---HHHHHHHHHHHHHHHHHHHHH----hC-CeEEEEecCcHHHHHHHHHHhhC
Confidence            234789999999975322     123   245588888887777777644    33 3566666543321        12


Q ss_pred             CCCCchhhc-hHHHHHHHHHHHHHHhC
Q 041914          160 GKRRTDYHM-SKHAVIGLVRSASVQLG  185 (264)
Q Consensus       160 ~~~~~~y~~-sK~al~~~~~~la~e~~  185 (264)
                      .|..-.++. +..-...+...++..+.
T Consensus       138 ~p~~rviG~gt~LD~~r~~~~la~~lg  164 (313)
T 1hye_A          138 FERNQVFGLGTHLDSLRFKVAIAKFFG  164 (313)
T ss_dssp             CCTTSEEECTTHHHHHHHHHHHHHHHT
T ss_pred             cChhcEEEeCccHHHHHHHHHHHHHhC
Confidence            445555676 55556666677777664

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.48  E-value=0.00053  Score=56.02  Aligned_cols=77  Identities=9%  Similarity=0.171  Sum_probs=51.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++++|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++ .+.+.+......+..+..  .+.   .       . 
T Consensus       115 ~~~l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~-a~~la~~~~~~~~~~~~~--~~l---~-------~-  179 (272)
T 3pwz_A          115 GEPLRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAK-ALALRNELDHSRLRISRY--EAL---E-------G-  179 (272)
T ss_dssp             CCCCTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHH-HHHHHHHHCCTTEEEECS--GGG---T-------T-
T ss_pred             CCCccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHHhccCCeeEeeH--HHh---c-------c-
Confidence            34688999999998 7999999999999997 66666665544 344444443223344322  111   1       1 


Q ss_pred             cCCccEEEEcCCCC
Q 041914           89 YGQLDIMFSNAGIL  102 (264)
Q Consensus        89 ~~~id~lv~~ag~~  102 (264)
                       ...|+|||+.+..
T Consensus       180 -~~~DivInaTp~g  192 (272)
T 3pwz_A          180 -QSFDIVVNATSAS  192 (272)
T ss_dssp             -CCCSEEEECSSGG
T ss_pred             -cCCCEEEECCCCC
Confidence             3689999998754

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=97.45  E-value=0.00032  Score=59.33  Aligned_cols=76  Identities=20%  Similarity=0.413  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|...++.+...|++|+++ ++.++. +.+.+ +..   ..  .| .+.+ ..+.+.+... ..++|
T Consensus       150 ~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~-~~~~~-lGa---~~--i~-~~~~-~~~~~~~~~~-~~g~D  218 (343)
T 3gaz_A          150 DGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDL-EYVRD-LGA---TP--ID-ASRE-PEDYAAEHTA-GQGFD  218 (343)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHH-HHHHH-HTS---EE--EE-TTSC-HHHHHHHHHT-TSCEE
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHH-HHHHH-cCC---CE--ec-cCCC-HHHHHHHHhc-CCCce
Confidence            58999999999999999999999999997777 544432 33322 322   12  34 3322 2222222221 13699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|.++|
T Consensus       219 ~vid~~g  225 (343)
T 3gaz_A          219 LVYDTLG  225 (343)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.44  E-value=0.00034  Score=59.72  Aligned_cols=72  Identities=14%  Similarity=0.169  Sum_probs=53.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      ..+|+|.|+ |++|+.+++.|++. .+|.+..+..+.. +.+.     ..+..+.+|++|.+++.++++       +.|+
T Consensus        16 ~mkilvlGa-G~vG~~~~~~L~~~-~~v~~~~~~~~~~-~~~~-----~~~~~~~~d~~d~~~l~~~~~-------~~Dv   80 (365)
T 3abi_A           16 HMKVLILGA-GNIGRAIAWDLKDE-FDVYIGDVNNENL-EKVK-----EFATPLKVDASNFDKLVEVMK-------EFEL   80 (365)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHTTT-SEEEEEESCHHHH-HHHT-----TTSEEEECCTTCHHHHHHHHT-------TCSE
T ss_pred             ccEEEEECC-CHHHHHHHHHHhcC-CCeEEEEcCHHHH-HHHh-----ccCCcEEEecCCHHHHHHHHh-------CCCE
Confidence            347999998 99999999998764 6766666654443 3222     134568899999998888776       6799


Q ss_pred             EEEcCCC
Q 041914           95 MFSNAGI  101 (264)
Q Consensus        95 lv~~ag~  101 (264)
                      ||++++.
T Consensus        81 Vi~~~p~   87 (365)
T 3abi_A           81 VIGALPG   87 (365)
T ss_dssp             EEECCCG
T ss_pred             EEEecCC
Confidence            9999864

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=97.42  E-value=0.00038  Score=59.35  Aligned_cols=103  Identities=17%  Similarity=0.315  Sum_probs=65.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|..+++.+...|++|+++.++.++. +.+.+ +...  ..  .|..+.+ +.+.+.+..  .+++|
T Consensus       163 ~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~-~~~~~-~Ga~--~~--~~~~~~~-~~~~~~~~~--~~g~D  233 (362)
T 2c0c_A          163 EGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKS-AFLKS-LGCD--RP--INYKTEP-VGTVLKQEY--PEGVD  233 (362)
T ss_dssp             TTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHH-HHHHH-TTCS--EE--EETTTSC-HHHHHHHHC--TTCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHH-HHHHH-cCCc--EE--EecCChh-HHHHHHHhc--CCCCC
Confidence            589999999999999999999999999988777765443 33322 2222  22  2444322 222222221  13699


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      ++|+++|.   .                         .++.+++.++.   .|+++.+++..+
T Consensus       234 ~vid~~g~---~-------------------------~~~~~~~~l~~---~G~iv~~g~~~~  265 (362)
T 2c0c_A          234 VVYESVGG---A-------------------------MFDLAVDALAT---KGRLIVIGFISG  265 (362)
T ss_dssp             EEEECSCT---H-------------------------HHHHHHHHEEE---EEEEEECCCGGG
T ss_pred             EEEECCCH---H-------------------------HHHHHHHHHhc---CCEEEEEeCCCC
Confidence            99999872   0                         12344555554   579999887654

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=97.39  E-value=0.00085  Score=56.74  Aligned_cols=76  Identities=21%  Similarity=0.357  Sum_probs=51.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~i   92 (264)
                      .|+++||+||+|++|...++.+...|++|+++.++.++. +.+.+ +..+  ..  .|..+  +   +.+++++.. +.+
T Consensus       150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~~-lGa~--~v--i~~~~--~---~~~~~~~~~~~g~  218 (346)
T 3fbg_A          150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETI-EWTKK-MGAD--IV--LNHKE--S---LLNQFKTQGIELV  218 (346)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHH-HHHHH-HTCS--EE--ECTTS--C---HHHHHHHHTCCCE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHh-cCCc--EE--EECCc--c---HHHHHHHhCCCCc
Confidence            689999999999999999999888999988887765543 33333 3322  22  23332  1   223333322 479


Q ss_pred             cEEEEcCC
Q 041914           93 DIMFSNAG  100 (264)
Q Consensus        93 d~lv~~ag  100 (264)
                      |++|.++|
T Consensus       219 Dvv~d~~g  226 (346)
T 3fbg_A          219 DYVFCTFN  226 (346)
T ss_dssp             EEEEESSC
T ss_pred             cEEEECCC
Confidence            99999987

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=97.35  E-value=0.00058  Score=56.58  Aligned_cols=73  Identities=15%  Similarity=0.288  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++||+|++|++|..+++.+...|++|+++.+++++... +.+ +...  ..  .|..+ .+.    .+++    +++
T Consensus       125 ~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~-~~~-~ga~--~~--~~~~~~~~~----~~~~----~~~  190 (302)
T 1iz0_A          125 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL-PLA-LGAE--EA--ATYAEVPER----AKAW----GGL  190 (302)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHH-HHH-TTCS--EE--EEGGGHHHH----HHHT----TSE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HHh-cCCC--EE--EECCcchhH----HHHh----cCc
Confidence            58999999999999999999999999998888886665432 222 2222  12  35544 222    2222    479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|+ +|.
T Consensus       191 d~vid-~g~  198 (302)
T 1iz0_A          191 DLVLE-VRG  198 (302)
T ss_dssp             EEEEE-CSC
T ss_pred             eEEEE-CCH
Confidence            99999 874

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.29  E-value=0.0018  Score=47.17  Aligned_cols=73  Identities=11%  Similarity=0.136  Sum_probs=53.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++++|.|. |.+|..+++.|.+.|++|+++.++.+.. +.+.+.    .+.++..|.++++.+.++      ...+.|.+
T Consensus         8 ~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~-~~~~~~----g~~~i~gd~~~~~~l~~a------~i~~ad~v   75 (140)
T 3fwz_A            8 NHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRV-DELRER----GVRAVLGNAANEEIMQLA------HLECAKWL   75 (140)
T ss_dssp             SCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHT----TCEEEESCTTSHHHHHHT------TGGGCSEE
T ss_pred             CCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHH-HHHHHc----CCCEEECCCCCHHHHHhc------CcccCCEE
Confidence            56778886 8999999999999999988888876554 333321    456788999999766553      11367888


Q ss_pred             EEcCC
Q 041914           96 FSNAG  100 (264)
Q Consensus        96 v~~ag  100 (264)
                      |.+.+
T Consensus        76 i~~~~   80 (140)
T 3fwz_A           76 ILTIP   80 (140)
T ss_dssp             EECCS
T ss_pred             EEECC
Confidence            87754

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=97.27  E-value=0.0017  Score=55.30  Aligned_cols=78  Identities=21%  Similarity=0.316  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+| +|++|...++.+...|++|+++.++.++... +.+ +..+  ..+  | .+.+++.+.+.++... .++|
T Consensus       189 ~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~-~~~-lGa~--~vi--~-~~~~~~~~~v~~~~~g-~g~D  259 (363)
T 3uog_A          189 AGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA-LGAD--HGI--N-RLEEDWVERVYALTGD-RGAD  259 (363)
T ss_dssp             TTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHH-HTCS--EEE--E-TTTSCHHHHHHHHHTT-CCEE
T ss_pred             CCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHH-HHH-cCCC--EEE--c-CCcccHHHHHHHHhCC-CCce
Confidence            589999999 8999999998888899998888776554432 322 3222  222  4 3322222223222211 2699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|.++|
T Consensus       260 ~vid~~g  266 (363)
T 3uog_A          260 HILEIAG  266 (363)
T ss_dssp             EEEEETT
T ss_pred             EEEECCC
Confidence            9999998

>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*

Probab=97.27  E-value=0.0061  Score=49.96  Aligned_cols=36  Identities=22%  Similarity=0.150  Sum_probs=29.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      +++.|.|+ |.+|..++..|++.|++|++..++.+..
T Consensus         5 ~kV~VIGa-G~mG~~iA~~la~~G~~V~l~d~~~~~~   40 (283)
T 4e12_A            5 TNVTVLGT-GVLGSQIAFQTAFHGFAVTAYDINTDAL   40 (283)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCeEEEEeCCHHHH
Confidence            57778875 8899999999999999988777766544

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=97.25  E-value=0.0013  Score=55.60  Aligned_cols=77  Identities=19%  Similarity=0.248  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+++||+|+ |++|...++.+...|+ +|+++.++.++. +.+.+ + .+    ...|..+. ++.+.+.++.  ..++
T Consensus       164 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~-~~~~~-l-a~----~v~~~~~~-~~~~~~~~~~--~~g~  232 (343)
T 2dq4_A          164 SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRL-AFARP-Y-AD----RLVNPLEE-DLLEVVRRVT--GSGV  232 (343)
T ss_dssp             TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHH-GGGTT-T-CS----EEECTTTS-CHHHHHHHHH--SSCE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHHH-h-HH----hccCcCcc-CHHHHHHHhc--CCCC
Confidence            7899999999 9999999988888999 888877765443 22221 1 11    12354442 2233333332  2479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.++|.
T Consensus       233 D~vid~~g~  241 (343)
T 2dq4_A          233 EVLLEFSGN  241 (343)
T ss_dssp             EEEEECSCC
T ss_pred             CEEEECCCC
Confidence            999999873

>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A

Probab=97.21  E-value=0.01  Score=49.18  Aligned_cols=143  Identities=13%  Similarity=0.048  Sum_probs=75.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcE-EEEecC--chhhHHH----HHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           17 VAIITGGASGIGETTARLFADHGARM-IVIADI--QDELGRQ----VATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v-~~~~~~--~~~~~~~----~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++||||+|.+|.+++..|+..|... +.+.+.  .++..+.    +.+... ...+.+.. +  +.           +.
T Consensus         2 KI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~--~~-----------~a   67 (303)
T 1o6z_A            2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-G--GY-----------ED   67 (303)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-C--CG-----------GG
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-C--CH-----------HH
Confidence            68999999999999999999987522 444444  2222111    111110 11222222 1  11           11


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC--------CCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS--------CGG  160 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~--------~~~  160 (264)
                      +.+.|++||.+|.....     ..+.   .+.+..|+..+..+.+.+    .+...++.++++|.-...        .+.
T Consensus        68 ~~~aDvVi~~ag~~~~~-----g~~r---~dl~~~N~~i~~~i~~~i----~~~~p~~~viv~SNPv~~~~~~~~~~~~~  135 (303)
T 1o6z_A           68 TAGSDVVVITAGIPRQP-----GQTR---IDLAGDNAPIMEDIQSSL----DEHNDDYISLTTSNPVDLLNRHLYEAGDR  135 (303)
T ss_dssp             GTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHHHHHHHHHHH----HTTCSCCEEEECCSSHHHHHHHHHHHSSS
T ss_pred             hCCCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHHHHHHHHHH----HHHCCCcEEEEeCChHHHHHHHHHHHcCC
Confidence            23789999999975322     1233   345788887766666655    454434555554333221        123


Q ss_pred             CCCchhhc-hHHHHHHHHHHHHHHhC
Q 041914          161 KRRTDYHM-SKHAVIGLVRSASVQLG  185 (264)
Q Consensus       161 ~~~~~y~~-sK~al~~~~~~la~e~~  185 (264)
                      |..-.++. .-.=...+-..++..+.
T Consensus       136 p~~rviG~gt~Ld~~r~~~~la~~l~  161 (303)
T 1o6z_A          136 SREQVIGFGGRLDSARFRYVLSEEFD  161 (303)
T ss_dssp             CGGGEEECCHHHHHHHHHHHHHHHHT
T ss_pred             CHHHeeecccchhHHHHHHHHHHHhC
Confidence            33334444 22223455556666653

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=97.21  E-value=0.00073  Score=51.57  Aligned_cols=78  Identities=13%  Similarity=0.131  Sum_probs=55.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.+++++|.| .|.+|..+++.|.+. |++|+++.++.+.. +.+.+.    .+..+..|.++.+.+.++     ....
T Consensus        36 ~~~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~-~~~~~~----g~~~~~gd~~~~~~l~~~-----~~~~  104 (183)
T 3c85_A           36 NPGHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAA-QQHRSE----GRNVISGDATDPDFWERI-----LDTG  104 (183)
T ss_dssp             CCTTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHH-HHHHHT----TCCEEECCTTCHHHHHTB-----CSCC
T ss_pred             CCCCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHH-HHHHHC----CCCEEEcCCCCHHHHHhc-----cCCC
Confidence            46677899998 599999999999999 99988887765543 333222    245677899987655432     0124


Q ss_pred             CccEEEEcCC
Q 041914           91 QLDIMFSNAG  100 (264)
Q Consensus        91 ~id~lv~~ag  100 (264)
                      +.|.+|.+.+
T Consensus       105 ~ad~vi~~~~  114 (183)
T 3c85_A          105 HVKLVLLAMP  114 (183)
T ss_dssp             CCCEEEECCS
T ss_pred             CCCEEEEeCC
Confidence            6899998764

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=97.20  E-value=0.001  Score=52.30  Aligned_cols=73  Identities=16%  Similarity=0.210  Sum_probs=53.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++|.|+ |.+|..+++.|.++|++|+++.++.+.. +.+.+..   ...++..|.++++.+.++      ...+.|.+|
T Consensus         2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~-~~l~~~~---~~~~i~gd~~~~~~l~~a------~i~~ad~vi   70 (218)
T 3l4b_C            2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELC-EEFAKKL---KATIIHGDGSHKEILRDA------EVSKNDVVV   70 (218)
T ss_dssp             CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHH-HHHHHHS---SSEEEESCTTSHHHHHHH------TCCTTCEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHH-HHHHHHc---CCeEEEcCCCCHHHHHhc------CcccCCEEE
Confidence            4789996 9999999999999999988888765544 3332221   356889999998776644      124679998


Q ss_pred             EcCC
Q 041914           97 SNAG  100 (264)
Q Consensus        97 ~~ag  100 (264)
                      .+.+
T Consensus        71 ~~~~   74 (218)
T 3l4b_C           71 ILTP   74 (218)
T ss_dssp             ECCS
T ss_pred             EecC
Confidence            7654

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=97.18  E-value=0.0012  Score=56.36  Aligned_cols=76  Identities=20%  Similarity=0.356  Sum_probs=50.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|...++.+...|++|+++. +.++ .+.+ +.+..+  ..  .|..+.+.    .+++.+ .+++|
T Consensus       183 ~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~-~~~~-~~lGa~--~v--~~~~~~~~----~~~~~~-~~g~D  250 (375)
T 2vn8_A          183 TGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDA-SELV-RKLGAD--DV--IDYKSGSV----EEQLKS-LKPFD  250 (375)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HHHH-HHTTCS--EE--EETTSSCH----HHHHHT-SCCBS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHH-HHHH-HHcCCC--EE--EECCchHH----HHHHhh-cCCCC
Confidence            589999999999999999998888999987776 3333 2333 333322  22  24444322    223332 25799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       251 ~vid~~g~  258 (375)
T 2vn8_A          251 FILDNVGG  258 (375)
T ss_dssp             EEEESSCT
T ss_pred             EEEECCCC
Confidence            99999884

>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*

Probab=97.08  E-value=0.0034  Score=52.37  Aligned_cols=115  Identities=15%  Similarity=0.153  Sum_probs=65.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCC---CcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           17 VAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGV---GKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.|+||+|.+|..++..|++.|  .+++++.... . .....+....   .++.....    .++.+.++       .+
T Consensus         2 KI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~-~-~~~a~dL~~~~~~~~l~~~~~----t~d~~~a~-------~~   68 (314)
T 1mld_A            2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH-T-PGVAADLSHIETRATVKGYLG----PEQLPDCL-------KG   68 (314)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS-H-HHHHHHHTTSSSSCEEEEEES----GGGHHHHH-------TT
T ss_pred             EEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc-c-HHHHHHHhccCcCceEEEecC----CCCHHHHh-------CC
Confidence            58999999999999999999988  6766666654 2 1221222111   11222100    11223223       37


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      .|++|+.+|......     .+.   .+.+..|+.....+.+.+    .+....+.++++|.-..
T Consensus        69 aDvVvi~ag~~~~~g-----~~r---~dl~~~n~~i~~~i~~~i----~~~~p~a~viv~sNPv~  121 (314)
T 1mld_A           69 CDVVVIPAGVPRKPG-----MTR---DDLFNTNATIVATLTAAC----AQHCPDAMICIISNPVN  121 (314)
T ss_dssp             CSEEEECCSCCCCTT-----CCG---GGGHHHHHHHHHHHHHHH----HHHCTTSEEEECSSCHH
T ss_pred             CCEEEECCCcCCCCC-----CcH---HHHHHHHHHHHHHHHHHH----HhhCCCeEEEEECCCcc
Confidence            899999999754321     121   123566665555555444    44333678888765443

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.99  E-value=0.00032  Score=57.50  Aligned_cols=40  Identities=15%  Similarity=0.170  Sum_probs=34.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDE   51 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~   51 (264)
                      .++.+|+++|+|+ ||+|++++..|++.|+ +|.++.|+.++
T Consensus       113 ~~l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~  153 (277)
T 3don_A          113 EGIEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSR  153 (277)
T ss_dssp             TTGGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGG
T ss_pred             CCcCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHH
Confidence            4678999999997 7999999999999999 77777776554

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.98  E-value=0.0024  Score=51.38  Aligned_cols=80  Identities=14%  Similarity=0.206  Sum_probs=51.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCch------------------hhHHHHHhhh----CCCcEEEE
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQD------------------ELGRQVATSI----GVGKCHYV   68 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~------------------~~~~~~~~~~----~~~~~~~~   68 (264)
                      +|.+++|+|.|+ ||+|..+++.|++.|. ++.++.+..-                  +..+.+.+.+    ...++..+
T Consensus        28 ~l~~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~  106 (249)
T 1jw9_B           28 ALKDSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPV  106 (249)
T ss_dssp             HHHHCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEE
T ss_pred             HHhCCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEE
Confidence            467899999996 7999999999999998 4455554430                  2223333222    22356666


Q ss_pred             EecCCCHHHHHHHHHHHHHhcCCccEEEEcCC
Q 041914           69 HCDVTNECQVKALVDSTVQNYGQLDIMFSNAG  100 (264)
Q Consensus        69 ~~D~s~~~~~~~~~~~~~~~~~~id~lv~~ag  100 (264)
                      ..++.+ +.+.+++.       ..|++|.+..
T Consensus       107 ~~~~~~-~~~~~~~~-------~~DvVi~~~d  130 (249)
T 1jw9_B          107 NALLDD-AELAALIA-------EHDLVLDCTD  130 (249)
T ss_dssp             CSCCCH-HHHHHHHH-------TSSEEEECCS
T ss_pred             eccCCH-hHHHHHHh-------CCCEEEEeCC
Confidence            666653 33333333       6899998753

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.98  E-value=0.0089  Score=48.57  Aligned_cols=68  Identities=16%  Similarity=0.263  Sum_probs=47.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|+++|.|+ ||.|++++..|++.|.+|.++.|+.++..+ +. ...   +...  ++.+.              ...|+
T Consensus       118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~-la-~~~---~~~~--~~~~l--------------~~~Di  175 (269)
T 3phh_A          118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDF-FQ-RLG---CDCF--MEPPK--------------SAFDL  175 (269)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHH-HH-HHT---CEEE--SSCCS--------------SCCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHH-HH-HCC---CeEe--cHHHh--------------ccCCE
Confidence            899999997 999999999999999887777777665433 33 322   2222  22221              15799


Q ss_pred             EEEcCCCCCC
Q 041914           95 MFSNAGILSS  104 (264)
Q Consensus        95 lv~~ag~~~~  104 (264)
                      +||+.+....
T Consensus       176 VInaTp~Gm~  185 (269)
T 3phh_A          176 IINATSASLH  185 (269)
T ss_dssp             EEECCTTCCC
T ss_pred             EEEcccCCCC
Confidence            9999876543

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=96.97  E-value=0.006  Score=51.59  Aligned_cols=81  Identities=14%  Similarity=0.140  Sum_probs=48.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHH-hcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQ-NYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~-~~~~   91 (264)
                      .|+++||+|+ |++|...++.+...|++|+++.+++++. +.+. .+..+  ..  .|..+ .+..+++.+...+ ..++
T Consensus       168 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~-~lGa~--~~--~~~~~~~~~~~~i~~~~~~~~g~g  240 (352)
T 1e3j_A          168 LGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAK-NCGAD--VT--LVVDPAKEEESSIIERIRSAIGDL  240 (352)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHH-HTTCS--EE--EECCTTTSCHHHHHHHHHHHSSSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHH-HHHH-HhCCC--EE--EcCcccccHHHHHHHHhccccCCC
Confidence            5899999997 9999999988888999976666654443 3332 23222  22  24443 2222222221110 0236


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       241 ~D~vid~~g~  250 (352)
T 1e3j_A          241 PNVTIDCSGN  250 (352)
T ss_dssp             CSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=96.95  E-value=0.00055  Score=50.18  Aligned_cols=72  Identities=17%  Similarity=0.255  Sum_probs=47.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+++++|.|+ |++|+.+++.|.+.|++|.+..|+.++ .+.+.+...   ....  +..+.   ..+++       ..|
T Consensus        20 ~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~-~~~~a~~~~---~~~~--~~~~~---~~~~~-------~~D   82 (144)
T 3oj0_A           20 GGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDH-VRAFAEKYE---YEYV--LINDI---DSLIK-------NND   82 (144)
T ss_dssp             CCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHH-HHHHHHHHT---CEEE--ECSCH---HHHHH-------TCS
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHH-HHHHHHHhC---CceE--eecCH---HHHhc-------CCC
Confidence            3899999996 999999999999999995555555443 344444433   1111  23332   22232       679


Q ss_pred             EEEEcCCCC
Q 041914           94 IMFSNAGIL  102 (264)
Q Consensus        94 ~lv~~ag~~  102 (264)
                      ++|.+.+..
T Consensus        83 ivi~at~~~   91 (144)
T 3oj0_A           83 VIITATSSK   91 (144)
T ss_dssp             EEEECSCCS
T ss_pred             EEEEeCCCC
Confidence            999988754

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=96.93  E-value=0.0012  Score=55.30  Aligned_cols=75  Identities=12%  Similarity=0.166  Sum_probs=46.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++||+|++|++|...++.+...|++|+++.+++++.. .+.+ +..+  ..  .|..+.+  ...+.++.  .+++|++|
T Consensus       152 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~-~~~~-lGa~--~~--i~~~~~~--~~~~~~~~--~~~~d~vi  221 (328)
T 1xa0_A          152 PVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHD-YLRV-LGAK--EV--LAREDVM--AERIRPLD--KQRWAAAV  221 (328)
T ss_dssp             CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHH-HHHH-TTCS--EE--EECC-----------CC--SCCEEEEE
T ss_pred             eEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHH-HHHH-cCCc--EE--EecCCcH--HHHHHHhc--CCcccEEE
Confidence            7999999999999999988889999888888765542 2322 3222  12  3444432  12222221  24699999


Q ss_pred             EcCCC
Q 041914           97 SNAGI  101 (264)
Q Consensus        97 ~~ag~  101 (264)
                      .++|.
T Consensus       222 d~~g~  226 (328)
T 1xa0_A          222 DPVGG  226 (328)
T ss_dssp             ECSTT
T ss_pred             ECCcH
Confidence            99874

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.90  E-value=0.0052  Score=50.35  Aligned_cols=72  Identities=8%  Similarity=0.198  Sum_probs=48.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++.+|+++|+|+ ||.|++++..|.+.|+ +|.++.|+.++ .+.+.+..     ..+.     .++       +.+ 
T Consensus       117 ~~~~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~k-a~~La~~~-----~~~~-----~~~-------l~~-  176 (282)
T 3fbt_A          117 RVEIKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEK-TSEIYGEF-----KVIS-----YDE-------LSN-  176 (282)
T ss_dssp             TCCCTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHH-HHHHCTTS-----EEEE-----HHH-------HTT-
T ss_pred             CCCccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHH-HHHHHHhc-----Cccc-----HHH-------HHh-
Confidence            34678999999997 7999999999999999 66666665544 34443321     1221     111       212 


Q ss_pred             cCCccEEEEcCCCC
Q 041914           89 YGQLDIMFSNAGIL  102 (264)
Q Consensus        89 ~~~id~lv~~ag~~  102 (264)
                      . ..|+|||+.+..
T Consensus       177 l-~~DivInaTp~G  189 (282)
T 3fbt_A          177 L-KGDVIINCTPKG  189 (282)
T ss_dssp             C-CCSEEEECSSTT
T ss_pred             c-cCCEEEECCccC
Confidence            2 689999998764

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=96.86  E-value=0.0047  Score=52.42  Aligned_cols=38  Identities=18%  Similarity=0.214  Sum_probs=32.4

Q ss_pred             CC-cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EG-KVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~-k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .| .++||+|++|++|...++.+...|++++++.+..++
T Consensus       166 ~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~  204 (364)
T 1gu7_A          166 PGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPN  204 (364)
T ss_dssp             TTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTT
T ss_pred             CCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence            47 999999999999999998877889998888766554

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=96.84  E-value=0.0046  Score=53.48  Aligned_cols=73  Identities=18%  Similarity=0.353  Sum_probs=48.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.|++++|.|+ |++|..+++.|...|+ +|+++.|+.++. +.+.+....   ..  .+..   ++...+       .
T Consensus       164 ~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra-~~la~~~g~---~~--~~~~---~l~~~l-------~  226 (404)
T 1gpj_A          164 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERA-VELARDLGG---EA--VRFD---ELVDHL-------A  226 (404)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHHHHHTC---EE--CCGG---GHHHHH-------H
T ss_pred             cccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHH-HHHHHHcCC---ce--ecHH---hHHHHh-------c
Confidence            478999999998 9999999999999999 666666654433 233333321   12  2222   222222       2


Q ss_pred             CccEEEEcCCC
Q 041914           91 QLDIMFSNAGI  101 (264)
Q Consensus        91 ~id~lv~~ag~  101 (264)
                      ..|++|.+.+.
T Consensus       227 ~aDvVi~at~~  237 (404)
T 1gpj_A          227 RSDVVVSATAA  237 (404)
T ss_dssp             TCSEEEECCSS
T ss_pred             CCCEEEEccCC
Confidence            68999999764

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=96.82  E-value=0.0059  Score=52.09  Aligned_cols=78  Identities=14%  Similarity=0.109  Sum_probs=51.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQ   91 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~   91 (264)
                      -.|+++||+|++|++|...++.+...|++|+.+. ++++ .+ +.+.+..+  ++  .|..+.+    +.+++++.. ++
T Consensus       163 ~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~-~~-~~~~lGa~--~v--i~~~~~~----~~~~v~~~t~g~  231 (371)
T 3gqv_A          163 SKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHN-FD-LAKSRGAE--EV--FDYRAPN----LAQTIRTYTKNN  231 (371)
T ss_dssp             SSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGG-HH-HHHHTTCS--EE--EETTSTT----HHHHHHHHTTTC
T ss_pred             CCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHH-HH-HHHHcCCc--EE--EECCCch----HHHHHHHHccCC
Confidence            4689999999999999999988888999987775 3333 23 33333322  22  3444432    233333322 46


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       232 ~d~v~d~~g~  241 (371)
T 3gqv_A          232 LRYALDCITN  241 (371)
T ss_dssp             CCEEEESSCS
T ss_pred             ccEEEECCCc
Confidence            9999999884

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=96.80  E-value=0.0044  Score=52.12  Aligned_cols=76  Identities=14%  Similarity=0.192  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|+ |++|...++.+...|++|+.+.+++++. +.+. .+..+  ..  .|..+.+..+    .+.+..+++|
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~-~~~~-~lGa~--~~--i~~~~~~~~~----~~~~~~g~~d  234 (340)
T 3s2e_A          166 PGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKL-NLAR-RLGAE--VA--VNARDTDPAA----WLQKEIGGAH  234 (340)
T ss_dssp             TTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHH-HHHH-HTTCS--EE--EETTTSCHHH----HHHHHHSSEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHH-HHHH-HcCCC--EE--EeCCCcCHHH----HHHHhCCCCC
Confidence            6899999997 8999999988888999988777765544 2222 23222  22  3544433222    2333336899


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|.++|
T Consensus       235 ~vid~~g  241 (340)
T 3s2e_A          235 GVLVTAV  241 (340)
T ss_dssp             EEEESSC
T ss_pred             EEEEeCC
Confidence            9999876

>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*

Probab=96.77  E-value=0.0019  Score=54.26  Aligned_cols=117  Identities=10%  Similarity=0.118  Sum_probs=64.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--c-----EEEEecCch-hhHHH-HHhhhCC--CcEEEEEecCCCHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGA--R-----MIVIADIQD-ELGRQ-VATSIGV--GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~--~-----v~~~~~~~~-~~~~~-~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      .+|+||||+|.+|.+++..|+..|.  +     ++++..... +..+. ..+....  .-...+.  ..+  ...     
T Consensus         4 ~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~~~~~~~~--~~~--~~~-----   74 (333)
T 5mdh_A            4 IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVI--ATD--KEE-----   74 (333)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEE--EES--CHH-----
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhhcccCCEE--EcC--CcH-----
Confidence            5799999999999999999998875  4     566655432 22222 2222111  1111111  111  111     


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCc-EEEEecCCC
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRG-SIVCTASVA  155 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~-~iv~iss~~  155 (264)
                        +.+.+.|++|+.||....+.     .   .-.+.++.|+.....    +.+.+.+...++ .++++|.-.
T Consensus        75 --~~~~daDvVvitAg~prkpG-----~---tR~dll~~N~~i~~~----i~~~i~~~~~~~~~vivvsNPv  132 (333)
T 5mdh_A           75 --IAFKDLDVAILVGSMPRRDG-----M---ERKDLLKANVKIFKC----QGAALDKYAKKSVKVIVVGNPA  132 (333)
T ss_dssp             --HHTTTCSEEEECCSCCCCTT-----C---CTTTTHHHHHHHHHH----HHHHHHHHSCTTCEEEECSSSH
T ss_pred             --HHhCCCCEEEEeCCCCCCCC-----C---CHHHHHHHHHHHHHH----HHHHHHHhCCCCeEEEEcCCch
Confidence              12237899999998643211     1   234456677765444    444555555355 577776543

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=96.75  E-value=0.0076  Score=50.77  Aligned_cols=77  Identities=13%  Similarity=0.199  Sum_probs=48.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADH--GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .|+++||+|+ |++|...++.+...  |++|+++.+++++. +.+.+ +..+.  ++  |..+.   ...++++.+ ..+
T Consensus       170 ~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~-~~~~~-lGa~~--vi--~~~~~---~~~~~~~~~-g~g  238 (344)
T 2h6e_A          170 AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHR-DFALE-LGADY--VS--EMKDA---ESLINKLTD-GLG  238 (344)
T ss_dssp             SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHH-HHHHH-HTCSE--EE--CHHHH---HHHHHHHHT-TCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHH-HHHHH-hCCCE--Ee--ccccc---hHHHHHhhc-CCC
Confidence            7899999999 99999999888888  99977777665543 33322 32221  22  32220   122333332 126


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       239 ~D~vid~~g~  248 (344)
T 2h6e_A          239 ASIAIDLVGT  248 (344)
T ss_dssp             EEEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999873

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.67  E-value=0.0029  Score=50.22  Aligned_cols=72  Identities=14%  Similarity=0.154  Sum_probs=52.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+.++|.|+ |.+|+.+++.|.+.|+ |+++.++.+.. +.+.     ..+.++..|.++++.+.++      ...+.|.
T Consensus         9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~-~~~~-----~~~~~i~gd~~~~~~l~~a------~i~~ad~   74 (234)
T 2aef_A            9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK-KVLR-----SGANFVHGDPTRVSDLEKA------NVRGARA   74 (234)
T ss_dssp             -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHH-HHHH-----TTCEEEESCTTCHHHHHHT------TCTTCSE
T ss_pred             CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHH-HHHh-----cCCeEEEcCCCCHHHHHhc------CcchhcE
Confidence            467889997 8999999999999999 88777765543 3222     1367889999998766554      1236788


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      +|.+.+
T Consensus        75 vi~~~~   80 (234)
T 2aef_A           75 VIVDLE   80 (234)
T ss_dssp             EEECCS
T ss_pred             EEEcCC
Confidence            887653

>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*

Probab=96.66  E-value=0.023  Score=47.46  Aligned_cols=119  Identities=13%  Similarity=0.169  Sum_probs=61.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      .++-.++++.|+|+ |.+|.+++..|+..|.  +++++....+.......+....    ..+.....|            
T Consensus         4 ~~~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~~------------   70 (326)
T 3vku_A            4 ITDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSAE------------   70 (326)
T ss_dssp             ---CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEECC------------
T ss_pred             cccCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEECc------------
Confidence            45566789999996 9999999999999987  6555555433332222222111    122222211            


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                        .+.+.+-|++|..+|....+        -+.-.+.++.|+.-    ++.+.+.+.+..+++.++++|.-.
T Consensus        71 --~~a~~~aDiVvi~ag~~~kp--------G~tR~dL~~~N~~I----~~~i~~~i~~~~p~a~ilvvtNPv  128 (326)
T 3vku_A           71 --YSDAKDADLVVITAGAPQKP--------GETRLDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             --GGGGTTCSEEEECCCCC------------------------C----HHHHHHHHHTTTCCSEEEECSSSH
T ss_pred             --HHHhcCCCEEEECCCCCCCC--------CchHHHHHHHHHHH----HHHHHHHHHhcCCceEEEEccCch
Confidence              12234789999999964321        12234456666643    445555556655467788776443

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=96.63  E-value=0.0059  Score=52.23  Aligned_cols=81  Identities=21%  Similarity=0.389  Sum_probs=51.6

Q ss_pred             CCCcEEEEeC-CCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           13 LEGKVAIITG-GASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        13 l~~k~vlItG-as~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      -.|.++||.| |+|++|...++.+...|++|+.+.+++++. +.+. .+..+.  .  .|..+.+-.+++.+....  .+
T Consensus       169 ~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~-~~~~-~lGa~~--~--~~~~~~~~~~~v~~~t~~--~g  240 (379)
T 3iup_A          169 LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQA-DLLK-AQGAVH--V--CNAASPTFMQDLTEALVS--TG  240 (379)
T ss_dssp             HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHH-HHHH-HTTCSC--E--EETTSTTHHHHHHHHHHH--HC
T ss_pred             cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHH-hCCCcE--E--EeCCChHHHHHHHHHhcC--CC
Confidence            3578899997 999999999988888899988887765543 3332 233222  2  244443322222222222  26


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.+.|.
T Consensus       241 ~d~v~d~~g~  250 (379)
T 3iup_A          241 ATIAFDATGG  250 (379)
T ss_dssp             CCEEEESCEE
T ss_pred             ceEEEECCCc
Confidence            9999999884

>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*

Probab=96.62  E-value=0.022  Score=46.77  Aligned_cols=89  Identities=15%  Similarity=0.179  Sum_probs=57.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch------------------hhHHHHH----hhhCCCcEEE
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD------------------ELGRQVA----TSIGVGKCHY   67 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~------------------~~~~~~~----~~~~~~~~~~   67 (264)
                      ..+|..++|+|.|+ ||+|..+++.|++.|..-+.+.+...                  ...+.++    +.....++..
T Consensus        31 q~kL~~~~VlVvGa-GGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~  109 (292)
T 3h8v_A           31 YEKIRTFAVAIVGV-GGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEV  109 (292)
T ss_dssp             -CGGGGCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEE
T ss_pred             HHHHhCCeEEEECc-CHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEE
Confidence            34678899999986 89999999999999986555544322                  1222222    2223346777


Q ss_pred             EEecCCCHHHHHHHHHHHHHhc----CCccEEEEcC
Q 041914           68 VHCDVTNECQVKALVDSTVQNY----GQLDIMFSNA   99 (264)
Q Consensus        68 ~~~D~s~~~~~~~~~~~~~~~~----~~id~lv~~a   99 (264)
                      +..++++.+.+..+++.+....    ...|++|.+.
T Consensus       110 ~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~  145 (292)
T 3h8v_A          110 HNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCV  145 (292)
T ss_dssp             ECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECC
T ss_pred             ecccCCcHHHHHHHhhhhcccccccCCCCCEEEECC
Confidence            7778887777776665543211    3678888664

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=96.60  E-value=0.0081  Score=50.96  Aligned_cols=77  Identities=19%  Similarity=0.328  Sum_probs=49.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC-C
Q 041914           14 EGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG-Q   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-~   91 (264)
                      .|.++||+|+ |++|...++.+... |++|+++.+++++. +.+. .+..+  +.  .|..+.  +.+.+.++.  .+ +
T Consensus       186 ~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~-~~~~-~lGa~--~v--i~~~~~--~~~~v~~~~--~g~g  254 (359)
T 1h2b_A          186 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKL-KLAE-RLGAD--HV--VDARRD--PVKQVMELT--RGRG  254 (359)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHH-HHHH-HTTCS--EE--EETTSC--HHHHHHHHT--TTCC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHH-HHHH-HhCCC--EE--Eeccch--HHHHHHHHh--CCCC
Confidence            5899999999 89999999888788 99977777765543 3222 23222  22  355443  222233222  13 6


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       255 ~Dvvid~~G~  264 (359)
T 1h2b_A          255 VNVAMDFVGS  264 (359)
T ss_dssp             EEEEEESSCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*

Probab=96.58  E-value=0.085  Score=44.07  Aligned_cols=114  Identities=13%  Similarity=0.130  Sum_probs=65.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHH---HHhhhCC--CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQ---VATSIGV--GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++.|+|+ |.+|.+++..|+..|.  +++++....+.....   +.+....  ..+.....|.              +
T Consensus         5 ~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~~--------------~   69 (326)
T 3pqe_A            5 VNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGTY--------------E   69 (326)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEECG--------------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCcH--------------H
Confidence            467999996 9999999999999987  656665544333222   2221111  1223332221              1


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .+.+-|++|.++|....+     ..+   -.+.++.|+.-    ++.+.+.+.+..+.+.++++|.-.
T Consensus        70 a~~~aDvVvi~ag~p~kp-----G~~---R~dL~~~N~~I----v~~i~~~I~~~~p~a~vlvvtNPv  125 (326)
T 3pqe_A           70 DCKDADIVCICAGANQKP-----GET---RLELVEKNLKI----FKGIVSEVMASGFDGIFLVATNPV  125 (326)
T ss_dssp             GGTTCSEEEECCSCCCCT-----TCC---HHHHHHHHHHH----HHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             HhCCCCEEEEecccCCCC-----Ccc---HHHHHHHHHHH----HHHHHHHHHHhcCCeEEEEcCChH
Confidence            223789999999864321     123   23456666654    444444555554467788777543

>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}

Probab=96.57  E-value=0.0062  Score=51.34  Aligned_cols=120  Identities=13%  Similarity=0.075  Sum_probs=64.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +.++++.|+|++|.+|..++..++..|.  +++++....++......+.... .  +-..++.-..+....+       .
T Consensus         6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~-~--~~~~~i~~t~d~~~al-------~   75 (343)
T 3fi9_A            6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC-G--FEGLNLTFTSDIKEAL-------T   75 (343)
T ss_dssp             SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH-C--CTTCCCEEESCHHHHH-------T
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC-c--CCCCceEEcCCHHHHh-------C
Confidence            4568899999999999999999999984  6666655443332222222110 0  0000111001112222       3


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcE-EEEecCC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGS-IVCTASV  154 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~-iv~iss~  154 (264)
                      +-|++|.++|.....     ..+   -.+.++.|+.-    ++.+.+.+.+...++. ++++|.-
T Consensus        76 dADvVvitaG~p~kp-----G~~---R~dLl~~N~~I----~~~i~~~i~~~~p~a~~vlvvsNP  128 (343)
T 3fi9_A           76 DAKYIVSSGGAPRKE-----GMT---REDLLKGNAEI----AAQLGKDIKSYCPDCKHVIIIFNP  128 (343)
T ss_dssp             TEEEEEECCC------------C---HHHHHHHHHHH----HHHHHHHHHHHCTTCCEEEECSSS
T ss_pred             CCCEEEEccCCCCCC-----CCC---HHHHHHHHHHH----HHHHHHHHHHhccCcEEEEEecCc
Confidence            789999999864221     122   34556677654    4444455555444664 6777643

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.01  Score=50.63  Aligned_cols=74  Identities=15%  Similarity=0.300  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|+ |++|...++.+...|++|+++.+++++.. .+.+ +...  .  ..|..+.+.++    ++.   +++|
T Consensus       194 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~-~a~~-lGa~--~--vi~~~~~~~~~----~~~---~g~D  259 (369)
T 1uuf_A          194 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKRE-AAKA-LGAD--E--VVNSRNADEMA----AHL---KSFD  259 (369)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHH-HHHH-HTCS--E--EEETTCHHHHH----TTT---TCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHH-cCCc--E--EeccccHHHHH----Hhh---cCCC
Confidence            5889999997 89999999888888999777777665543 3332 3322  1  23555554322    221   4799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       260 vvid~~g~  267 (369)
T 1uuf_A          260 FILNTVAA  267 (369)
T ss_dssp             EEEECCSS
T ss_pred             EEEECCCC
Confidence            99999885

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=96.57  E-value=0.012  Score=50.37  Aligned_cols=78  Identities=22%  Similarity=0.311  Sum_probs=50.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCC--CHHHHHHHHHHHHHhc-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT--NECQVKALVDSTVQNY-   89 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s--~~~~~~~~~~~~~~~~-   89 (264)
                      .|+++||+| +|++|...++.+...| ++|+++.+++++. +.+. .+..+  ..+  |..  +.+++   .+++++.. 
T Consensus       195 ~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~-~lGa~--~vi--~~~~~~~~~~---~~~v~~~~~  264 (380)
T 1vj0_A          195 AGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRL-KLAE-EIGAD--LTL--NRRETSVEER---RKAIMDITH  264 (380)
T ss_dssp             BTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHHH-HTTCS--EEE--ETTTSCHHHH---HHHHHHHTT
T ss_pred             CCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHH-HHHH-HcCCc--EEE--eccccCcchH---HHHHHHHhC
Confidence            478999999 8999999998888889 5888877765543 3232 22222  222  333  23333   33343333 


Q ss_pred             C-CccEEEEcCCC
Q 041914           90 G-QLDIMFSNAGI  101 (264)
Q Consensus        90 ~-~id~lv~~ag~  101 (264)
                      + ++|++|.++|.
T Consensus       265 g~g~Dvvid~~g~  277 (380)
T 1vj0_A          265 GRGADFILEATGD  277 (380)
T ss_dssp             TSCEEEEEECSSC
T ss_pred             CCCCcEEEECCCC
Confidence            2 69999999884

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=96.55  E-value=0.0059  Score=51.93  Aligned_cols=76  Identities=22%  Similarity=0.341  Sum_probs=48.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CC
Q 041914           14 EGKVAIITGGASGIGETTARLFAD-HGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~   91 (264)
                      .|+++||+||+|++|...++.+.. .|++|+++.+++++. +.+. .+..+  ..  .|..+  +   +.+++++.. ++
T Consensus       171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~-~~~~-~lGad--~v--i~~~~--~---~~~~v~~~~~~g  239 (363)
T 4dvj_A          171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ-EWVK-SLGAH--HV--IDHSK--P---LAAEVAALGLGA  239 (363)
T ss_dssp             SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHH-HHHH-HTTCS--EE--ECTTS--C---HHHHHHTTCSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHH-HHHH-HcCCC--EE--EeCCC--C---HHHHHHHhcCCC
Confidence            588999999999999988866555 488877777765543 3332 23322  22  24433  1   233343332 47


Q ss_pred             ccEEEEcCC
Q 041914           92 LDIMFSNAG  100 (264)
Q Consensus        92 id~lv~~ag  100 (264)
                      +|++|.++|
T Consensus       240 ~Dvvid~~g  248 (363)
T 4dvj_A          240 PAFVFSTTH  248 (363)
T ss_dssp             EEEEEECSC
T ss_pred             ceEEEECCC
Confidence            999999887

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=96.53  E-value=0.0031  Score=53.50  Aligned_cols=37  Identities=24%  Similarity=0.382  Sum_probs=32.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .|.+|||+|++|++|...++.+...|++++++.+..+
T Consensus       167 ~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~  203 (357)
T 1zsy_A          167 PGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRP  203 (357)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCS
T ss_pred             CCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCcc
Confidence            5899999999999999998877778999888877654

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=96.52  E-value=0.0072  Score=51.51  Aligned_cols=85  Identities=14%  Similarity=0.155  Sum_probs=53.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecC-----------CCHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV-----------TNECQVKA   80 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~-----------s~~~~~~~   80 (264)
                      .+.+++++|+|+ |.+|...++.+...|++|++..++.+.. +.+.+. .   ..++..|.           -..+....
T Consensus       181 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l-~~~~~l-G---a~~~~l~~~~~~~~gya~~~~~~~~~~  254 (381)
T 3p2y_A          181 TVKPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVA-EQVRSV-G---AQWLDLGIDAAGEGGYARELSEAERAQ  254 (381)
T ss_dssp             EECCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGH-HHHHHT-T---CEECCCC-------------CHHHHHH
T ss_pred             CcCCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHH-HHHHHc-C---CeEEeccccccccccchhhhhHHHHhh
Confidence            357899999999 8999999999999999977777766544 333332 1   22332221           00111222


Q ss_pred             HHHHHHHhcCCccEEEEcCCCC
Q 041914           81 LVDSTVQNYGQLDIMFSNAGIL  102 (264)
Q Consensus        81 ~~~~~~~~~~~id~lv~~ag~~  102 (264)
                      -.+.+.+.....|++|.++.+.
T Consensus       255 ~~~~l~e~l~~aDIVI~tv~iP  276 (381)
T 3p2y_A          255 QQQALEDAITKFDIVITTALVP  276 (381)
T ss_dssp             HHHHHHHHHTTCSEEEECCCCT
T ss_pred             hHHHHHHHHhcCCEEEECCCCC
Confidence            3334444446889999887554

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=96.50  E-value=0.0064  Score=51.55  Aligned_cols=75  Identities=16%  Similarity=0.278  Sum_probs=50.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|+ |++|...++.+...|++|+++.+++++... +.+.+..+.  .  .|..+.+.+       .+..+.+|
T Consensus       180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~-~~~~lGa~~--v--i~~~~~~~~-------~~~~~g~D  246 (357)
T 2cf5_A          180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREE-ALQDLGADD--Y--VIGSDQAKM-------SELADSLD  246 (357)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHH-HHTTSCCSC--E--EETTCHHHH-------HHSTTTEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHH-HHHHcCCce--e--eccccHHHH-------HHhcCCCC
Confidence            6899999995 999999998888889998888877655422 222332222  2  244454322       22224799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       247 ~vid~~g~  254 (357)
T 2cf5_A          247 YVIDTVPV  254 (357)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCC
Confidence            99999984

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=96.50  E-value=0.0063  Score=51.91  Aligned_cols=77  Identities=25%  Similarity=0.331  Sum_probs=47.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH---h-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ---N-   88 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~---~-   88 (264)
                      .|+++||+|+ |++|...++.+...|+ +|+++.++++ ..+.+. .+...  .  ..|.++.+    +.+.+.+   . 
T Consensus       182 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~-~~~~a~-~lGa~--~--vi~~~~~~----~~~~i~~~~~~~  250 (370)
T 4ej6_A          182 AGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQAT-KRRLAE-EVGAT--A--TVDPSAGD----VVEAIAGPVGLV  250 (370)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHH-HHHHHH-HHTCS--E--EECTTSSC----HHHHHHSTTSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHH-HHHHHH-HcCCC--E--EECCCCcC----HHHHHHhhhhcc
Confidence            5899999998 9999999988888899 5555544433 333333 33322  1  23544432    2233332   1 


Q ss_pred             cCCccEEEEcCCC
Q 041914           89 YGQLDIMFSNAGI  101 (264)
Q Consensus        89 ~~~id~lv~~ag~  101 (264)
                      .+++|++|.++|.
T Consensus       251 ~gg~Dvvid~~G~  263 (370)
T 4ej6_A          251 PGGVDVVIECAGV  263 (370)
T ss_dssp             TTCEEEEEECSCC
T ss_pred             CCCCCEEEECCCC
Confidence            2479999999873

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=96.48  E-value=0.0048  Score=51.46  Aligned_cols=73  Identities=21%  Similarity=0.337  Sum_probs=48.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+||+|++|...++.+...|++|+.+.+. ++ .+ ..+.+..+  ..  .|..+.+...       +...++|
T Consensus       152 ~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~-~~-~~-~~~~lGa~--~~--i~~~~~~~~~-------~~~~g~D  217 (321)
T 3tqh_A          152 QGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASK-RN-HA-FLKALGAE--QC--INYHEEDFLL-------AISTPVD  217 (321)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECH-HH-HH-HHHHHTCS--EE--EETTTSCHHH-------HCCSCEE
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEecc-ch-HH-HHHHcCCC--EE--EeCCCcchhh-------hhccCCC
Confidence            58999999999999999999888899998777643 32 22 22333322  22  3444432121       1124799


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      ++|.+.|
T Consensus       218 ~v~d~~g  224 (321)
T 3tqh_A          218 AVIDLVG  224 (321)
T ss_dssp             EEEESSC
T ss_pred             EEEECCC
Confidence            9999987

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=96.48  E-value=0.011  Score=50.45  Aligned_cols=79  Identities=15%  Similarity=0.298  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|+++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+..+  ..  .|..+ .+++.+.+.++..  +.
T Consensus       192 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~-~lGa~--~v--i~~~~~~~~~~~~~~~~~~--~g  262 (374)
T 1cdo_A          192 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF-EKAK-VFGAT--DF--VNPNDHSEPISQVLSKMTN--GG  262 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH-HTTCC--EE--ECGGGCSSCHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH-HhCCc--eE--EeccccchhHHHHHHHHhC--CC
Confidence            5889999995 9999999988888899 666666655543 3332 22221  22  24332 1123333333322  47


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       263 ~D~vid~~g~  272 (374)
T 1cdo_A          263 VDFSLECVGN  272 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=96.46  E-value=0.0051  Score=52.19  Aligned_cols=75  Identities=23%  Similarity=0.309  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+|+ |++|...++.+...|++|+++.++.++.. .+.+ +...  ..+  |..+..   .+.+++.   +++|
T Consensus       179 ~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~-~~~~-lGa~--~v~--~~~~~~---~~~~~~~---~~~D  245 (360)
T 1piw_A          179 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKRE-DAMK-MGAD--HYI--ATLEEG---DWGEKYF---DTFD  245 (360)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHH-HHHH-HTCS--EEE--EGGGTS---CHHHHSC---SCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHH-HHHH-cCCC--EEE--cCcCch---HHHHHhh---cCCC
Confidence            5899999999 99999999888888999888877666543 2222 3222  222  333220   1122222   5799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       246 ~vid~~g~  253 (360)
T 1piw_A          246 LIVVCASS  253 (360)
T ss_dssp             EEEECCSC
T ss_pred             EEEECCCC
Confidence            99999985

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=96.41  E-value=0.01  Score=47.80  Aligned_cols=34  Identities=32%  Similarity=0.481  Sum_probs=28.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      +|.+++|+|.|+ ||+|.++++.|+..|..-+.+.
T Consensus        25 ~l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lv   58 (251)
T 1zud_1           25 KLLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLA   58 (251)
T ss_dssp             HHHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEE
T ss_pred             HHhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEE
Confidence            577899999997 7799999999999998655554

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=96.41  E-value=0.034  Score=46.95  Aligned_cols=78  Identities=17%  Similarity=0.277  Sum_probs=48.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCC--CHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVT--NECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s--~~~~~~~~~~~~~~~~~   90 (264)
                      .|.++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+...  ..  .|..  +.++..+.+.+...  +
T Consensus       171 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~-~lGa~--~v--i~~~~~~~~~~~~~i~~~~~--~  241 (356)
T 1pl8_A          171 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRL-SKAK-EIGAD--LV--LQISKESPQEIARKVEGQLG--C  241 (356)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHH-HTTCS--EE--EECSSCCHHHHHHHHHHHHT--S
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH-HhCCC--EE--EcCcccccchHHHHHHHHhC--C
Confidence            5889999996 9999999988878899 666666655433 3332 23222  22  2444  22332222222221  4


Q ss_pred             CccEEEEcCC
Q 041914           91 QLDIMFSNAG  100 (264)
Q Consensus        91 ~id~lv~~ag  100 (264)
                      ++|++|.++|
T Consensus       242 g~D~vid~~g  251 (356)
T 1pl8_A          242 KPEVTIECTG  251 (356)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEEEECCC
Confidence            7999999987

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=96.41  E-value=0.0069  Score=51.32  Aligned_cols=76  Identities=22%  Similarity=0.417  Sum_probs=49.0

Q ss_pred             CCCcEEEEeCCCChhHHHH-HHHH-HHcCCc-EEEEecCch---hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETT-ARLF-ADHGAR-MIVIADIQD---ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        13 l~~k~vlItGas~giG~~i-a~~l-~~~g~~-v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      +.++++||+|+ |++|... ++.+ ...|++ |+.+.++.+   +. +.+. .+..   ..+  |..+.+ +.+ +.++ 
T Consensus       171 ~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~-~~~~-~lGa---~~v--~~~~~~-~~~-i~~~-  239 (357)
T 2b5w_A          171 WDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTI-DIIE-ELDA---TYV--DSRQTP-VED-VPDV-  239 (357)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHH-HHHH-HTTC---EEE--ETTTSC-GGG-HHHH-
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHH-HHHH-HcCC---ccc--CCCccC-HHH-HHHh-
Confidence            34499999999 9999999 7666 567998 888887765   43 2222 2222   223  555432 222 3333 


Q ss_pred             HhcCCccEEEEcCCC
Q 041914           87 QNYGQLDIMFSNAGI  101 (264)
Q Consensus        87 ~~~~~id~lv~~ag~  101 (264)
                        .+++|++|.++|.
T Consensus       240 --~gg~Dvvid~~g~  252 (357)
T 2b5w_A          240 --YEQMDFIYEATGF  252 (357)
T ss_dssp             --SCCEEEEEECSCC
T ss_pred             --CCCCCEEEECCCC
Confidence              2479999999873

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=96.38  E-value=0.017  Score=49.76  Aligned_cols=40  Identities=13%  Similarity=0.086  Sum_probs=33.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .+.+++++|+|+ |.+|..+++.+...|++|+++.++....
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~  208 (401)
T 1x13_A          169 KVPPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVK  208 (401)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGH
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            467999999996 8999999999999999877666665544

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=96.38  E-value=0.015  Score=50.22  Aligned_cols=77  Identities=22%  Similarity=0.420  Sum_probs=48.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-C-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-G-   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~-   90 (264)
                      .|.++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+...  ..  .|..+.+    +.+++++.. + 
T Consensus       213 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~~~-~lGa~--~v--i~~~~~~----~~~~i~~~t~g~  281 (404)
T 3ip1_A          213 PGDNVVILGG-GPIGLAAVAILKHAGASKVILSEPSEVRR-NLAK-ELGAD--HV--IDPTKEN----FVEAVLDYTNGL  281 (404)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHH-HHHH-HHTCS--EE--ECTTTSC----HHHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH-HHHH-HcCCC--EE--EcCCCCC----HHHHHHHHhCCC
Confidence            5889999998 9999999988888899 655555554433 3333 33322  22  2444332    233333332 2 


Q ss_pred             CccEEEEcCCC
Q 041914           91 QLDIMFSNAGI  101 (264)
Q Consensus        91 ~id~lv~~ag~  101 (264)
                      ++|++|.++|.
T Consensus       282 g~D~vid~~g~  292 (404)
T 3ip1_A          282 GAKLFLEATGV  292 (404)
T ss_dssp             CCSEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            69999999874

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.37  E-value=0.012  Score=46.50  Aligned_cols=50  Identities=22%  Similarity=0.335  Sum_probs=39.9

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQV   56 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   56 (264)
                      +-+-..+++||.+||.|| |.+|...++.|.+.|++|.+++....+..+.+
T Consensus        22 ~~Pifl~L~gk~VLVVGg-G~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l   71 (223)
T 3dfz_A           22 MYTVMLDLKGRSVLVVGG-GTIATRRIKGFLQEGAAITVVAPTVSAEINEW   71 (223)
T ss_dssp             CCEEEECCTTCCEEEECC-SHHHHHHHHHHGGGCCCEEEECSSCCHHHHHH
T ss_pred             ccccEEEcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCCHHHHHH
Confidence            334456899999999997 58999999999999999998887655443433

>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*

Probab=96.31  E-value=0.018  Score=46.04  Aligned_cols=76  Identities=18%  Similarity=0.172  Sum_probs=57.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++.|.|++|.+|+.+++.+.+. +.+++.+.++..+....+. .  .  . -+..|++.++.....+....+.  +++++
T Consensus         2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-~--~--~-DvvIDfT~p~a~~~~~~~a~~~--g~~~V   73 (245)
T 1p9l_A            2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-G--N--T-EVVIDFTHPDVVMGNLEFLIDN--GIHAV   73 (245)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-T--T--C-CEEEECSCTTTHHHHHHHHHHT--TCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-c--C--C-cEEEEccChHHHHHHHHHHHHc--CCCEE
Confidence            5899999999999999999876 8888777766554433222 1  1  1 1677999999888888777665  68888


Q ss_pred             EEcCC
Q 041914           96 FSNAG  100 (264)
Q Consensus        96 v~~ag  100 (264)
                      |-..|
T Consensus        74 igTTG   78 (245)
T 1p9l_A           74 VGTTG   78 (245)
T ss_dssp             ECCCC
T ss_pred             EcCCC
Confidence            87776

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=96.26  E-value=0.017  Score=49.31  Aligned_cols=79  Identities=18%  Similarity=0.262  Sum_probs=48.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|++|||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+..+  ..  .|..+ .+++.+.+.++..  +.
T Consensus       195 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~-~lGa~--~v--i~~~~~~~~~~~~v~~~~~--~g  265 (376)
T 1e3i_A          195 PGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF-PKAK-ALGAT--DC--LNPRELDKPVQDVITELTA--GG  265 (376)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH-HTTCS--EE--ECGGGCSSCHHHHHHHHHT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH-HhCCc--EE--EccccccchHHHHHHHHhC--CC
Confidence            5889999995 9999999988888899 666666655543 3332 22222  22  24332 1122223333322  47


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       266 ~Dvvid~~G~  275 (376)
T 1e3i_A          266 VDYSLDCAGT  275 (376)
T ss_dssp             BSEEEESSCC
T ss_pred             ccEEEECCCC
Confidence            9999999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=96.25  E-value=0.014  Score=49.76  Aligned_cols=79  Identities=19%  Similarity=0.284  Sum_probs=48.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|+++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+...  ..  .|..+ .+++.+.+.++..  +.
T Consensus       190 ~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~-~~~~-~lGa~--~v--i~~~~~~~~~~~~v~~~~~--~g  260 (373)
T 2fzw_A          190 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKF-ARAK-EFGAT--EC--INPQDFSKPIQEVLIEMTD--GG  260 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH-HHTCS--EE--ECGGGCSSCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH-HcCCc--eE--eccccccccHHHHHHHHhC--CC
Confidence            5889999996 9999999988888899 666666655543 3332 22222  12  23332 1122222332222  47


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       261 ~D~vid~~g~  270 (373)
T 2fzw_A          261 VDYSFECIGN  270 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=96.24  E-value=0.014  Score=49.69  Aligned_cols=79  Identities=18%  Similarity=0.329  Sum_probs=48.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|+++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+..+  ..  .|..+ .+++.+.+.++..  +.
T Consensus       191 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~-~lGa~--~v--i~~~~~~~~~~~~~~~~~~--~g  261 (374)
T 2jhf_A          191 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKF-AKAK-EVGAT--EC--VNPQDYKKPIQEVLTEMSN--GG  261 (374)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHH-HTTCS--EE--ECGGGCSSCHHHHHHHHTT--SC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHH-HHHH-HhCCc--eE--ecccccchhHHHHHHHHhC--CC
Confidence            5889999995 9999999988888999 666666665544 3332 22222  22  24332 1123333333222  47


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       262 ~D~vid~~g~  271 (374)
T 2jhf_A          262 VDFSFEVIGR  271 (374)
T ss_dssp             BSEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=96.23  E-value=0.007  Score=51.07  Aligned_cols=69  Identities=25%  Similarity=0.366  Sum_probs=47.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|+ |++|...++.+...|++|+++.+++++.. .+. .+..+.  .+    ++.+.+.+          .+|
T Consensus       176 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~-~~~-~lGa~~--v~----~~~~~~~~----------~~D  236 (348)
T 3two_A          176 KGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQ-DAL-SMGVKH--FY----TDPKQCKE----------ELD  236 (348)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHH-HHH-HTTCSE--EE----SSGGGCCS----------CEE
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHH-HHH-hcCCCe--ec----CCHHHHhc----------CCC
Confidence            5899999997 99999999888889999888777766543 222 233222  22    33322211          799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       237 ~vid~~g~  244 (348)
T 3two_A          237 FIISTIPT  244 (348)
T ss_dssp             EEEECCCS
T ss_pred             EEEECCCc
Confidence            99999884

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=96.16  E-value=0.0082  Score=48.93  Aligned_cols=40  Identities=30%  Similarity=0.400  Sum_probs=35.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||+++|.|.++-+|+.++..|...|++|.++.++.
T Consensus       155 ~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t  194 (285)
T 3p2o_A          155 EIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKT  194 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCc
Confidence            3578999999999999999999999999999977776653

>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}

Probab=96.15  E-value=0.019  Score=47.82  Aligned_cols=115  Identities=18%  Similarity=0.189  Sum_probs=66.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCc-hhhHHHHHhhhCC------CcEEEEEecCCCHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQ-DELGRQVATSIGV------GKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      +.+++.|+|+ |.+|.+++..|+..|. +|+++.+.+ ++..+.....+..      ........+  +.          
T Consensus         7 ~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~--d~----------   73 (315)
T 3tl2_A            7 KRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTS--DY----------   73 (315)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEES--CG----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcC--CH----------
Confidence            4678999997 9999999999999998 867766663 3332222111110      011111111  11          


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                       +.+.+.|++|.++|....+     ..+.   .+.++.|+.-.-.+.+    .+.+..+.+.++++|.-
T Consensus        74 -~a~~~aDvVIiaag~p~kp-----g~~R---~dl~~~N~~i~~~i~~----~i~~~~p~a~vlvvsNP  129 (315)
T 3tl2_A           74 -ADTADSDVVVITAGIARKP-----GMSR---DDLVATNSKIMKSITR----DIAKHSPNAIIVVLTNP  129 (315)
T ss_dssp             -GGGTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHHHHHHH----HHHHHCTTCEEEECCSS
T ss_pred             -HHhCCCCEEEEeCCCCCCC-----CCCH---HHHHHHHHHHHHHHHH----HHHHhCCCeEEEECCCh
Confidence             2234789999999975332     1233   4456666654444444    44444436788887743

>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*

Probab=96.11  E-value=0.046  Score=44.47  Aligned_cols=169  Identities=14%  Similarity=0.086  Sum_probs=98.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecCchhh--HHH-----------------HHhhhCCCcEEEEEecCCCH
Q 041914           16 KVAIITGGASGIGETTARLFAD-HGARMIVIADIQDEL--GRQ-----------------VATSIGVGKCHYVHCDVTNE   75 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~D~s~~   75 (264)
                      -++.|+|++|.+|+.+++.+.+ .|.+++.+.++....  .+.                 +.+.+..  + =+-.|++.+
T Consensus         6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g~~~~~v~~~~dl~~~l~~--~-DvVIDft~p   82 (273)
T 1dih_A            6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDD--F-DVFIDFTRP   82 (273)
T ss_dssp             EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTS--C-SEEEECSCH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcCCCcCCceecCCHHHHhcC--C-CEEEEcCCh
Confidence            3799999999999999999875 477766555443311  000                 1111111  1 144589999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHH-------H----hhHHHHHHHHHHHHHHHHHcCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL-------F----AINVRGMAACVKHAARVMVEGGV  144 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~-------~----~~n~~~~~~l~~~~l~~~~~~~~  144 (264)
                      +.....+....+.  ++++++-..|....        ..+.+.+.       +    .+-+.-.+.+++.+.++|..   
T Consensus        83 ~~~~~~~~~a~~~--G~~vVigTtG~~~e--------~~~~L~~~a~~~~vv~a~N~siGvn~~~~l~~~aa~~~~~---  149 (273)
T 1dih_A           83 EGTLNHLAFCRQH--GKGMVIGTTGFDEA--------GKQAIRDAAADIAIVFAANFSVGVNVMLKLLEKAAKVMGD---  149 (273)
T ss_dssp             HHHHHHHHHHHHT--TCEEEECCCCCCHH--------HHHHHHHHTTTSCEEECSCCCHHHHHHHHHHHHHHHHHTT---
T ss_pred             HHHHHHHHHHHhC--CCCEEEECCCCCHH--------HHHHHHHhcCCCCEEEEecCcHHHHHHHHHHHHHHHhcCC---
Confidence            9888888877766  67787766653210        11222221       1    11122355666777776642   


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHh---------------CcCCceEEEeeCCcccCcc
Q 041914          145 RGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL---------------GVHGIRVNCVSPHGLATPL  203 (264)
Q Consensus       145 ~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~---------------~~~~i~v~~v~pG~v~t~~  203 (264)
                      ...|=.+   ..++..+-..+|+.++...+.+.+.+...+               .+.+|.+.++.-|.+..+.
T Consensus       150 ~~dieii---E~Hh~~K~DaPSGTA~~~ae~i~~~~~~~~~~~~~~~r~~~~~~r~~~~i~i~s~R~g~vvg~h  220 (273)
T 1dih_A          150 YTDIEII---EAHHRHKVDAPSGTALAMGEAIAHALDKDLKDCAVYSREGHTGERVPGTIGFATVRAGDIVGEH  220 (273)
T ss_dssp             TSEEEEE---EEECTTCCSSSCHHHHHHHHHHHHHTTCCGGGTEECCCCSCCCSCCTTCEEEEEEECTTCCEEE
T ss_pred             CCCEEEE---EeecCCCCCCCCHHHHHHHHHHHHhhCCCccccccccccCccCCCCCCcceEEEEeCCCCCccE
Confidence            1222222   233444555678999988888776654321               1346899999877666553

>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A

Probab=96.07  E-value=0.017  Score=49.42  Aligned_cols=70  Identities=20%  Similarity=0.289  Sum_probs=50.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      -+.+|+++|.|+ |.+|+.+++.+.+.|++|+++...........       .-..+..|..|.+.+.++++       +
T Consensus         9 ~~~~~~IlIlG~-G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~-------ad~~~~~~~~d~~~l~~~~~-------~   73 (377)
T 3orq_A            9 LKFGATIGIIGG-GQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYV-------AHEFIQAKYDDEKALNQLGQ-------K   73 (377)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCTTCTTGGG-------SSEEEECCTTCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhh-------CCEEEECCCCCHHHHHHHHH-------h
Confidence            367899999986 67999999999999999888865443221111       11356689999988888775       3


Q ss_pred             ccEEE
Q 041914           92 LDIMF   96 (264)
Q Consensus        92 id~lv   96 (264)
                      +|+++
T Consensus        74 ~dvi~   78 (377)
T 3orq_A           74 CDVIT   78 (377)
T ss_dssp             CSEEE
T ss_pred             CCcce
Confidence            67764

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=96.05  E-value=0.019  Score=48.91  Aligned_cols=79  Identities=18%  Similarity=0.306  Sum_probs=47.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|++|||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+..+  +.+  |..+ .+++.+.+.++.  .+.
T Consensus       191 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~-~lGa~--~vi--~~~~~~~~~~~~i~~~t--~gg  261 (373)
T 1p0f_A          191 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF-PKAI-ELGAT--ECL--NPKDYDKPIYEVICEKT--NGG  261 (373)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGH-HHHH-HTTCS--EEE--CGGGCSSCHHHHHHHHT--TSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHH-HcCCc--EEE--ecccccchHHHHHHHHh--CCC
Confidence            5889999995 9999999988777899 566666555443 3332 23222  222  3332 112222222221  147


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       262 ~Dvvid~~g~  271 (373)
T 1p0f_A          262 VDYAVECAGR  271 (373)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=96.04  E-value=0.011  Score=50.52  Aligned_cols=79  Identities=20%  Similarity=0.272  Sum_probs=49.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~   91 (264)
                      .|.+|||+|+ |++|...++.+...|+ +|+++.+++++.. .+ +.+...  ..  .|..+ .+++.+.+.++.  .+.
T Consensus       193 ~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~-~a-~~lGa~--~v--i~~~~~~~~~~~~i~~~~--~gg  263 (378)
T 3uko_A          193 PGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKKYE-TA-KKFGVN--EF--VNPKDHDKPIQEVIVDLT--DGG  263 (378)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTHHH-HH-HTTTCC--EE--ECGGGCSSCHHHHHHHHT--TSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH-HH-HHcCCc--EE--EccccCchhHHHHHHHhc--CCC
Confidence            5889999998 9999999988888899 6777766665543 22 222222  22  23331 122222232222  247


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       264 ~D~vid~~g~  273 (378)
T 3uko_A          264 VDYSFECIGN  273 (378)
T ss_dssp             BSEEEECSCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=96.01  E-value=0.042  Score=46.12  Aligned_cols=81  Identities=20%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ..|+++||+|+ |++|...++.+...|+.++++....++..+.++ .+..  .+.+  |.++.+. .+....+.+ ....
T Consensus       159 ~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa--~~~i--~~~~~~~-~~~~~~~~~-~~g~  230 (346)
T 4a2c_A          159 CENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGA--MQTF--NSSEMSA-PQMQSVLRE-LRFN  230 (346)
T ss_dssp             CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTC--SEEE--ETTTSCH-HHHHHHHGG-GCSS
T ss_pred             CCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCC--eEEE--eCCCCCH-HHHHHhhcc-cCCc
Confidence            36899999987 899999998888899997666655554434333 3322  2233  3333221 222333322 2468


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |+++.++|.
T Consensus       231 d~v~d~~G~  239 (346)
T 4a2c_A          231 QLILETAGV  239 (346)
T ss_dssp             EEEEECSCS
T ss_pred             ccccccccc
Confidence            999988773

>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}

Probab=95.97  E-value=0.088  Score=42.92  Aligned_cols=37  Identities=19%  Similarity=0.268  Sum_probs=31.2

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      +++.|.|++|.+|.++++.|.+.|++|++..|+.+..
T Consensus        12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~   48 (286)
T 3c24_A           12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGR   48 (286)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHH
Confidence            4799999999999999999999999977666654443

>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}

Probab=95.93  E-value=0.48  Score=38.41  Aligned_cols=169  Identities=10%  Similarity=0.089  Sum_probs=94.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchh-h-H----------------HHHHhhhCCCcEEEEEecCCCHH
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQDE-L-G----------------RQVATSIGVGKCHYVHCDVTNEC   76 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~-~-~----------------~~~~~~~~~~~~~~~~~D~s~~~   76 (264)
                      -+|.|+|++|.+|+.+++.+.+. +.+++.+..+... . .                ..+.+.+....   +-.|++.++
T Consensus         8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g~~~gv~v~~dl~~ll~~~D---VVIDfT~p~   84 (272)
T 4f3y_A            8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLGKQTGVALTDDIERVCAEAD---YLIDFTLPE   84 (272)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTTCCCSCBCBCCHHHHHHHCS---EEEECSCHH
T ss_pred             cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhCCCCCceecCCHHHHhcCCC---EEEEcCCHH
Confidence            47999999999999999999876 6666655443321 0 0                00111111111   456889999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHH-----------HhhHHHHHHHHHHHHHHHHHcCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL-----------FAINVRGMAACVKHAARVMVEGGVR  145 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~-----------~~~n~~~~~~l~~~~l~~~~~~~~~  145 (264)
                      .....+....+.  ++++++-+.|....        ..+.+++.           |.+-+.-.+.+++.+.++|..   .
T Consensus        85 a~~~~~~~al~~--G~~vVigTTG~s~~--------~~~~L~~aa~~~~vv~a~N~s~Gv~l~~~~~~~aa~~l~~---~  151 (272)
T 4f3y_A           85 GTLVHLDAALRH--DVKLVIGTTGFSEP--------QKAQLRAAGEKIALVFSANMSVGVNVTMKLLEFAAKQFAQ---G  151 (272)
T ss_dssp             HHHHHHHHHHHH--TCEEEECCCCCCHH--------HHHHHHHHTTTSEEEECSCCCHHHHHHHHHHHHHHHHTSS---S
T ss_pred             HHHHHHHHHHHc--CCCEEEECCCCCHH--------HHHHHHHHhccCCEEEECCCCHHHHHHHHHHHHHHHhcCc---C
Confidence            888888887776  67888877663210        11223331           222233344455555555531   1


Q ss_pred             cEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHh---------------CcCCceEEEeeCCcccCcc
Q 041914          146 GSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL---------------GVHGIRVNCVSPHGLATPL  203 (264)
Q Consensus       146 ~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~---------------~~~~i~v~~v~pG~v~t~~  203 (264)
                      ..|=.+   ..++...-..+-+.+..-.+.+.+.+...+               .+.+|.+.++.-|.+..+.
T Consensus       152 ~diei~---E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~ivg~h  221 (272)
T 4f3y_A          152 YDIEII---EAHHRHKVDAPSGTALMMGETIAAATGRSLDDCAVYGRHGVTGERDPSTIGFSAIRGGDIVGDH  221 (272)
T ss_dssp             CEEEEE---EEECTTCCSSSCHHHHHHHHHHHHTTTCCHHHHEEECCCSCCCSCCTTCEEEEEEECTTCCEEE
T ss_pred             CCEEEE---EecCCCCCCCCCHHHHHHHHHHHHHhCcccccccccccccccCCCCCCccCEEEEECCCCceEE
Confidence            122111   223344444556666666666655433222               1246889999988776654

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=95.90  E-value=0.025  Score=48.58  Aligned_cols=78  Identities=17%  Similarity=0.200  Sum_probs=47.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--C
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--G   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~   90 (264)
                      .|++|||+|+ |++|...++.+...|+. |+++.+++++. +.+. .+..   ..  .|.++.+.+   .+++++..  .
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~-~~a~-~lGa---~~--i~~~~~~~~---~~~v~~~t~g~  253 (398)
T 1kol_A          185 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL-AHAK-AQGF---EI--ADLSLDTPL---HEQIAALLGEP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH-HHHH-HTTC---EE--EETTSSSCH---HHHHHHHHSSS
T ss_pred             CCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH-HHHH-HcCC---cE--EccCCcchH---HHHHHHHhCCC
Confidence            5889999995 99999998877778995 55555554433 3332 2221   22  354433222   22333322  2


Q ss_pred             CccEEEEcCCCC
Q 041914           91 QLDIMFSNAGIL  102 (264)
Q Consensus        91 ~id~lv~~ag~~  102 (264)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~G~~  265 (398)
T 1kol_A          254 EVDCAVDAVGFE  265 (398)
T ss_dssp             CEEEEEECCCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=95.87  E-value=0.015  Score=47.35  Aligned_cols=40  Identities=20%  Similarity=0.243  Sum_probs=35.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||+++|.|.++-+|+.++..|...|++|.++.++.
T Consensus       156 ~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T  195 (286)
T 4a5o_A          156 GADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFT  195 (286)
T ss_dssp             TCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCC
Confidence            3578999999999999999999999999999987776643

>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*

Probab=95.85  E-value=0.0091  Score=49.24  Aligned_cols=113  Identities=15%  Similarity=0.122  Sum_probs=66.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHH---HHhhhC-C-CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQ---VATSIG-V-GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~---~~~~~~-~-~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.|+|+ |.+|.+++..|++.|.  +++++.++++.....   +.+... . ....+...  +|.    +       .+
T Consensus         2 kI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~----~-------a~   67 (294)
T 1oju_A            2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG--ADY----S-------LL   67 (294)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE--SCG----G-------GG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe--CCH----H-------Hh
Confidence            5789999 9999999999999987  766666665443211   111111 0 11122211  111    1       12


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .+-|++|..+|....+     ..+.   .+.++.|+    .+++.+.+.+.+..+++.++++|.-.
T Consensus        68 ~~aDiVViaag~~~kp-----G~~R---~dl~~~N~----~i~~~i~~~i~~~~p~a~iivvsNPv  121 (294)
T 1oju_A           68 KGSEIIVVTAGLARKP-----GMTR---LDLAHKNA----GIIKDIAKKIVENAPESKILVVTNPM  121 (294)
T ss_dssp             TTCSEEEECCCCCCCS-----SCCH---HHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCC-----CCcH---HHHHHHHH----HHHHHHHHHHHhhCCCeEEEEeCCcc
Confidence            3679999999875322     1333   33455554    34556666666665567888887543

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=95.81  E-value=0.017  Score=49.68  Aligned_cols=40  Identities=10%  Similarity=0.008  Sum_probs=33.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .+.+.+|+|+|+ |.+|...++.+...|++|++..++....
T Consensus       187 ~v~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l  226 (405)
T 4dio_A          187 TVPAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAK  226 (405)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHH
T ss_pred             CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence            357899999999 8999999999999999977766666543

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=95.78  E-value=0.033  Score=47.34  Aligned_cols=77  Identities=14%  Similarity=0.243  Sum_probs=47.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~   91 (264)
                      .|+++||+|+ |++|...++.+...|+. |+.+.+++++. +.+. .+..+  ..+  |..+.+    +.+++.+.. ++
T Consensus       190 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~~~~-~~a~-~lGa~--~vi--~~~~~~----~~~~~~~~~~gg  258 (371)
T 1f8f_A          190 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRL-ELAK-QLGAT--HVI--NSKTQD----PVAAIKEITDGG  258 (371)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHH-HHTCS--EEE--ETTTSC----HHHHHHHHTTSC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHH-HHHH-HcCCC--EEe--cCCccC----HHHHHHHhcCCC
Confidence            5889999995 99999999887778995 66666654443 3332 22222  222  433322    223333322 37


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus       259 ~D~vid~~g~  268 (371)
T 1f8f_A          259 VNFALESTGS  268 (371)
T ss_dssp             EEEEEECSCC
T ss_pred             CcEEEECCCC
Confidence            9999999873

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=95.76  E-value=0.016  Score=48.88  Aligned_cols=77  Identities=16%  Similarity=0.218  Sum_probs=47.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-C-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-G-   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~-   90 (264)
                      .|.++||+|+ |++|...++.+...|+ +|+++.+++++. +.+. .+...  +.+  |..+.+    +.+++++.. + 
T Consensus       166 ~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~-~~~~-~lGa~--~vi--~~~~~~----~~~~v~~~t~g~  234 (352)
T 3fpc_A          166 LGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCC-DIAL-EYGAT--DII--NYKNGD----IVEQILKATDGK  234 (352)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHH-HHHH-HHTCC--EEE--CGGGSC----HHHHHHHHTTTC
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHH-HHHH-HhCCc--eEE--cCCCcC----HHHHHHHHcCCC
Confidence            5889999985 9999999988888899 677666554433 3332 23221  222  333322    233344433 2 


Q ss_pred             CccEEEEcCCC
Q 041914           91 QLDIMFSNAGI  101 (264)
Q Consensus        91 ~id~lv~~ag~  101 (264)
                      ++|++|.++|.
T Consensus       235 g~D~v~d~~g~  245 (352)
T 3fpc_A          235 GVDKVVIAGGD  245 (352)
T ss_dssp             CEEEEEECSSC
T ss_pred             CCCEEEECCCC
Confidence            59999998874

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=95.70  E-value=0.027  Score=48.27  Aligned_cols=40  Identities=10%  Similarity=0.002  Sum_probs=33.7

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ++.+++++|+|+ |++|+.+++.+...|++|++..++....
T Consensus       169 ~l~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~  208 (384)
T 1l7d_A          169 TVPPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK  208 (384)
T ss_dssp             EECCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            578999999996 8999999999999999966666665543

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=95.69  E-value=0.0089  Score=48.18  Aligned_cols=38  Identities=11%  Similarity=0.290  Sum_probs=31.3

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDE   51 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~   51 (264)
                      ++.+ +++|.|+ ||.|++++..|.+.|+ +|.++.|+.++
T Consensus       106 ~~~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~k  144 (253)
T 3u62_A          106 EVKE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIER  144 (253)
T ss_dssp             CCCS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHH
T ss_pred             CCCC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHH
Confidence            4678 8999987 9999999999999998 76666666443

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=95.69  E-value=0.02  Score=46.36  Aligned_cols=36  Identities=8%  Similarity=0.131  Sum_probs=33.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      +.||+++|.|.++-+|+.+++.|...|++|.++.++
T Consensus       148 l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~  183 (276)
T 3ngx_A          148 YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSK  183 (276)
T ss_dssp             CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCC
Confidence            899999999999999999999999999998777654

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=95.67  E-value=0.018  Score=46.87  Aligned_cols=39  Identities=21%  Similarity=0.359  Sum_probs=34.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      ..++.||+++|.|.++-+|+.++..|...|++|.++.++
T Consensus       156 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~  194 (285)
T 3l07_A          156 GIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRF  194 (285)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTT
T ss_pred             CCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCC
Confidence            347899999999999999999999999999997777654

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=95.64  E-value=0.023  Score=46.62  Aligned_cols=40  Identities=20%  Similarity=0.344  Sum_probs=35.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||+++|.|.++-+|+.++..|.+.|++|.++.++.
T Consensus       160 ~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T  199 (300)
T 4a26_A          160 GIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGT  199 (300)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTS
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCC
Confidence            3578999999999999999999999999999977776643

>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*

Probab=95.62  E-value=0.019  Score=44.56  Aligned_cols=36  Identities=19%  Similarity=0.331  Sum_probs=31.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      +++|+||+|.+|.++++.|++.|++|.++.|+.+..
T Consensus         2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~   37 (212)
T 1jay_A            2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKA   37 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHH
T ss_pred             eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            578999999999999999999999988877765543

>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6

Probab=95.50  E-value=0.089  Score=43.28  Aligned_cols=80  Identities=10%  Similarity=0.114  Sum_probs=50.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+++.|.||.|.+|.++++.|.+.|.+|.++.++.+....   +......+.++.+-..   .+..+++++.....+=-+
T Consensus        21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~~~~---~~~~~aDvVilavp~~---~~~~vl~~l~~~l~~~~i   94 (298)
T 2pv7_A           21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAE---SILANADVVIVSVPIN---LTLETIERLKPYLTENML   94 (298)
T ss_dssp             CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHH---HHHTTCSEEEECSCGG---GHHHHHHHHGGGCCTTSE
T ss_pred             CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcccCHH---HHhcCCCEEEEeCCHH---HHHHHHHHHHhhcCCCcE
Confidence            4679999999999999999999999998888776543222   2223335555544333   356666666543322124


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      ++..++
T Consensus        95 v~~~~s  100 (298)
T 2pv7_A           95 LADLTS  100 (298)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            444443

>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}

Probab=95.49  E-value=0.087  Score=40.91  Aligned_cols=78  Identities=13%  Similarity=0.146  Sum_probs=49.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..++..+++.|.| .|.+|.+++..|++.|.+|.+..|+.+        ......+.++.+-   ...+..+++++....
T Consensus        14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~--------~~~~aD~vi~av~---~~~~~~v~~~l~~~~   81 (209)
T 2raf_A           14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ--------ATTLGEIVIMAVP---YPALAALAKQYATQL   81 (209)
T ss_dssp             ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC--------CSSCCSEEEECSC---HHHHHHHHHHTHHHH
T ss_pred             ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH--------HhccCCEEEEcCC---cHHHHHHHHHHHHhc
Confidence            4567788999999 799999999999999999887777654        1222344444433   666777777776544


Q ss_pred             CCccEEEEcCC
Q 041914           90 GQLDIMFSNAG  100 (264)
Q Consensus        90 ~~id~lv~~ag  100 (264)
                      . =.++|++..
T Consensus        82 ~-~~~vi~~~~   91 (209)
T 2raf_A           82 K-GKIVVDITN   91 (209)
T ss_dssp             T-TSEEEECCC
T ss_pred             C-CCEEEEECC
Confidence            3 235555544

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=95.48  E-value=0.017  Score=48.02  Aligned_cols=84  Identities=20%  Similarity=0.180  Sum_probs=52.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++.|++++|.|++.=+|+.+++.|...|++|.++.|+........ +..............++++++.+.+.       
T Consensus       173 ~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra-~~la~~~~~~t~~~~t~~~~L~e~l~-------  244 (320)
T 1edz_A          173 NRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRG-ESLKLNKHHVEDLGEYSEDLLKKCSL-------  244 (320)
T ss_dssp             CTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESC-CCSSCCCCEEEEEEECCHHHHHHHHH-------
T ss_pred             CCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHH-HHHhhhcccccccccccHhHHHHHhc-------
Confidence            4789999999999888999999999999999777766532211100 11111001111111134455655555       


Q ss_pred             CccEEEEcCCCC
Q 041914           91 QLDIMFSNAGIL  102 (264)
Q Consensus        91 ~id~lv~~ag~~  102 (264)
                      .-|++|...|..
T Consensus       245 ~ADIVIsAtg~p  256 (320)
T 1edz_A          245 DSDVVITGVPSE  256 (320)
T ss_dssp             HCSEEEECCCCT
T ss_pred             cCCEEEECCCCC
Confidence            569999998863

>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A

Probab=95.45  E-value=0.049  Score=47.21  Aligned_cols=71  Identities=17%  Similarity=0.169  Sum_probs=52.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      -+.+|+++|.|+ |.+|+.+++.+.+.|++|+++............       -..+..|..|.+.+.++++       +
T Consensus        32 ~~~~~~IlIlG~-G~lg~~~~~aa~~lG~~v~v~d~~~~~p~~~~a-------d~~~~~~~~d~~~l~~~a~-------~   96 (419)
T 4e4t_A           32 ILPGAWLGMVGG-GQLGRMFCFAAQSMGYRVAVLDPDPASPAGAVA-------DRHLRAAYDDEAALAELAG-------L   96 (419)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCTTCHHHHHS-------SEEECCCTTCHHHHHHHHH-------H
T ss_pred             CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEECCCCcCchhhhC-------CEEEECCcCCHHHHHHHHh-------c
Confidence            467999999986 579999999999999998877654433222221       1345688999988888873       5


Q ss_pred             ccEEEE
Q 041914           92 LDIMFS   97 (264)
Q Consensus        92 id~lv~   97 (264)
                      +|+++.
T Consensus        97 ~D~V~~  102 (419)
T 4e4t_A           97 CEAVST  102 (419)
T ss_dssp             CSEEEE
T ss_pred             CCEEEE
Confidence            898873

>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}

Probab=95.41  E-value=0.33  Score=40.36  Aligned_cols=114  Identities=15%  Similarity=0.211  Sum_probs=64.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCC-----CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGV-----GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++.|+|+ |.+|.+++..|+..|. +++++....+.......+....     ....+...+  |.           +.
T Consensus         5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v~~t~--d~-----------~a   70 (321)
T 3p7m_A            5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKVRGTN--DY-----------KD   70 (321)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEES--CG-----------GG
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEEEEcC--CH-----------HH
Confidence            467889994 9999999999999987 7666666555432222222211     111222111  11           12


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      +.+-|++|..+|....+     ..+.   .+.+..|+.-.    +.+.+.+.+..+.+.+++++.-
T Consensus        71 ~~~aDvVIi~ag~p~k~-----G~~R---~dl~~~N~~i~----~~i~~~i~~~~p~a~vivvtNP  124 (321)
T 3p7m_A           71 LENSDVVIVTAGVPRKP-----GMSR---DDLLGINIKVM----QTVGEGIKHNCPNAFVICITNP  124 (321)
T ss_dssp             GTTCSEEEECCSCCCCT-----TCCH---HHHHHHHHHHH----HHHHHHHHHHCTTCEEEECCSS
T ss_pred             HCCCCEEEEcCCcCCCC-----CCCH---HHHHHHhHHHH----HHHHHHHHHHCCCcEEEEecCc
Confidence            23689999999864322     1233   33455565544    4444445554446788877643

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=95.39  E-value=0.028  Score=45.86  Aligned_cols=41  Identities=15%  Similarity=0.159  Sum_probs=35.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||+++|.|++.-+|+.+++.|...|++|.++.++..
T Consensus       154 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~  194 (288)
T 1b0a_A          154 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK  194 (288)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS
T ss_pred             CCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCch
Confidence            34789999999999999999999999999999888765543

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=95.39  E-value=0.038  Score=47.79  Aligned_cols=74  Identities=19%  Similarity=0.292  Sum_probs=50.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +..++|.|. |.+|..+++.|.+.|..|+++.++.+... .+.+.    .+.++..|.++++.+.++      ...+.|.
T Consensus         4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~-~~~~~----g~~vi~GDat~~~~L~~a------gi~~A~~   71 (413)
T 3l9w_A            4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIE-TLRKF----GMKVFYGDATRMDLLESA------GAAKAEV   71 (413)
T ss_dssp             CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHH-HHHHT----TCCCEESCTTCHHHHHHT------TTTTCSE
T ss_pred             CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHH-HHHhC----CCeEEEcCCCCHHHHHhc------CCCccCE
Confidence            346888886 88999999999999999888887766543 33222    345677788877765544      1125677


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      +|.+.+
T Consensus        72 viv~~~   77 (413)
T 3l9w_A           72 LINAID   77 (413)
T ss_dssp             EEECCS
T ss_pred             EEECCC
Confidence            766543

>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}

Probab=95.38  E-value=0.4  Score=40.28  Aligned_cols=119  Identities=15%  Similarity=0.197  Sum_probs=63.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCC-------cEEEEecCchhh--HHHHHhhhC---C-CcEEEEEecCCCHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGA-------RMIVIADIQDEL--GRQVATSIG---V-GKCHYVHCDVTNECQ   77 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~-------~v~~~~~~~~~~--~~~~~~~~~---~-~~~~~~~~D~s~~~~   77 (264)
                      ..+..-+|.|+||+|+||..++..|++...       + +.+.+..+..  .+-..-.++   . .....+..  ++.  
T Consensus        20 ~s~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~e-L~L~Di~~~~~~~~Gva~DL~~~~~~~~~~~~~~--~~~--   94 (345)
T 4h7p_A           20 GSMSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVE-LRLLDIEPALKALAGVEAELEDCAFPLLDKVVVT--ADP--   94 (345)
T ss_dssp             --CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEE-EEEECCGGGHHHHHHHHHHHHHTTCTTEEEEEEE--SCH--
T ss_pred             CCCCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccE-EEEECCCCccccchhhhhhhhhcCccCCCcEEEc--CCh--
Confidence            345567999999999999999999988643       3 4444443321  121111111   1 11112211  122  


Q ss_pred             HHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCC
Q 041914           78 VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASV  154 (264)
Q Consensus        78 ~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~  154 (264)
                       .       +.+.+-|++|..||....+     ..+.   .+.++.|+.    +++.+.+.+.+.. ....|+.+|.-
T Consensus        95 -~-------~a~~~advVvi~aG~prkp-----GmtR---~DLl~~Na~----I~~~~~~~i~~~a~~~~~vlvvsNP  152 (345)
T 4h7p_A           95 -R-------VAFDGVAIAIMCGAFPRKA-----GMER---KDLLEMNAR----IFKEQGEAIAAVAASDCRVVVVGNP  152 (345)
T ss_dssp             -H-------HHTTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECSSS
T ss_pred             -H-------HHhCCCCEEEECCCCCCCC-----CCCH---HHHHHHhHH----HHHHHHHHHHhhccCceEEEEeCCC
Confidence             1       1234789999999975432     1344   445667765    4455555555532 13456666543

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=95.32  E-value=0.022  Score=47.49  Aligned_cols=36  Identities=14%  Similarity=0.414  Sum_probs=31.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ++||+|++|++|...++.+...|++|+++.+++++.
T Consensus       153 ~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~  188 (330)
T 1tt7_A          153 SVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA  188 (330)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH
Confidence            899999999999999998888999988888876554

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=95.31  E-value=0.026  Score=46.84  Aligned_cols=68  Identities=12%  Similarity=0.159  Sum_probs=44.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+|+ |++|...++.+...|++|+.+. +.++. +.+.+ +..  -..+  |  |   .    +++   .+++|
T Consensus       142 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~-~~~~~-lGa--~~v~--~--d---~----~~v---~~g~D  201 (315)
T 3goh_A          142 KQREVLIVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQ-ALAAK-RGV--RHLY--R--E---P----SQV---TQKYF  201 (315)
T ss_dssp             SCCEEEEECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCH-HHHHH-HTE--EEEE--S--S---G----GGC---CSCEE
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhH-HHHHH-cCC--CEEE--c--C---H----HHh---CCCcc
Confidence            5899999999 9999999988888899988887 54433 33332 221  2223  3  2   1    112   35799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.+.|.
T Consensus       202 vv~d~~g~  209 (315)
T 3goh_A          202 AIFDAVNS  209 (315)
T ss_dssp             EEECC---
T ss_pred             EEEECCCc
Confidence            99998874

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=95.31  E-value=0.029  Score=46.05  Aligned_cols=40  Identities=15%  Similarity=0.219  Sum_probs=34.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||+++|.|++.-+|+.+++.|...|++|.++.++.
T Consensus       160 ~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t  199 (301)
T 1a4i_A          160 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKT  199 (301)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCc
Confidence            3478999999999999999999999999999977776543

>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*

Probab=95.25  E-value=0.76  Score=38.00  Aligned_cols=114  Identities=14%  Similarity=0.150  Sum_probs=63.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-C--CcEEEEecCchhhHHHHHhhhCC-CcEEEEEe-cCCCHHHHHHHHHHHHHhcCC
Q 041914           17 VAIITGGASGIGETTARLFADH-G--ARMIVIADIQDELGRQVATSIGV-GKCHYVHC-DVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g--~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ++.|+||+|.+|.+++..|+++ +  .+++++.... .......+.... ........ .-.+.+.           +.+
T Consensus         2 KV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~~~~~~v~~~~~~~~~~~-----------~~~   69 (312)
T 3hhp_A            2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHIPTAVKIKGFSGEDATPA-----------LEG   69 (312)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTSCSSEEEEEECSSCCHHH-----------HTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCCCCCceEEEecCCCcHHH-----------hCC
Confidence            5789999999999999999886 4  3555555544 322222222221 11222211 1011211           137


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      .|++|..+|....+     ..+   -.+.++.|+.-...+.+.+    .+..+++.+++++.-
T Consensus        70 aDivii~ag~~rkp-----G~~---R~dll~~N~~I~~~i~~~i----~~~~p~a~vlvvtNP  120 (312)
T 3hhp_A           70 ADVVLISAGVARKP-----GMD---RSDLFNVNAGIVKNLVQQV----AKTCPKACIGIITNP  120 (312)
T ss_dssp             CSEEEECCSCSCCT-----TCC---HHHHHHHHHHHHHHHHHHH----HHHCTTSEEEECSSC
T ss_pred             CCEEEEeCCCCCCC-----CCC---HHHHHHHHHHHHHHHHHHH----HHHCCCcEEEEecCc
Confidence            89999999975322     123   3556677775555555444    443336778877643

>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A

Probab=95.24  E-value=0.03  Score=47.41  Aligned_cols=35  Identities=29%  Similarity=0.530  Sum_probs=29.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      .+|.+++|+|.|+ ||+|.++++.|+..|..-+.+.
T Consensus       114 ~~L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lv  148 (353)
T 3h5n_A          114 DKLKNAKVVILGC-GGIGNHVSVILATSGIGEIILI  148 (353)
T ss_dssp             HHHHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEE
T ss_pred             HHHhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEE
Confidence            3577899999987 8999999999999998644444

>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}

Probab=95.15  E-value=0.062  Score=47.01  Aligned_cols=39  Identities=31%  Similarity=0.364  Sum_probs=33.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      +.++.+|+++|.|. |+.|.++|+.|.++|++|.+..++.
T Consensus         4 ~~~~~~k~v~viG~-G~sG~s~A~~l~~~G~~V~~~D~~~   42 (451)
T 3lk7_A            4 ITTFENKKVLVLGL-ARSGEAAARLLAKLGAIVTVNDGKP   42 (451)
T ss_dssp             CCTTTTCEEEEECC-TTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred             hhhcCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEeCCc
Confidence            45688999999999 8899999999999999987777654

>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A

Probab=95.15  E-value=0.027  Score=47.20  Aligned_cols=71  Identities=15%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+.++|.|. |.+|+.+++.|.++|. |+++.++++.. + +.+    ..+.++..|.+|++.++++      ...+.|.
T Consensus       115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~-~-~~~----~~~~~i~gd~~~~~~L~~a------~i~~a~~  180 (336)
T 1lnq_A          115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRK-K-VLR----SGANFVHGDPTRVSDLEKA------NVRGARA  180 (336)
T ss_dssp             -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHH-H-HHH----TTCEEEESCTTSHHHHHHT------CSTTEEE
T ss_pred             cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhh-h-HHh----CCcEEEEeCCCCHHHHHhc------ChhhccE
Confidence            457999996 9999999999999999 88777665544 3 332    2467899999999887755      1136788


Q ss_pred             EEEcC
Q 041914           95 MFSNA   99 (264)
Q Consensus        95 lv~~a   99 (264)
                      +|...
T Consensus       181 vi~~~  185 (336)
T 1lnq_A          181 VIVDL  185 (336)
T ss_dssp             EEECC
T ss_pred             EEEcC
Confidence            87654

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=95.02  E-value=0.77  Score=40.90  Aligned_cols=149  Identities=13%  Similarity=0.077  Sum_probs=88.9

Q ss_pred             cCCCcEEEEeCCCC-hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH-Hhc
Q 041914           12 KLEGKVAIITGGAS-GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV-QNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~-giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~-~~~   89 (264)
                      .+.|.+.++....+ +++..++..|.++|.+|+.+.-....                      |.+.+.+.+.+.. ...
T Consensus        47 ~~~g~wlv~~~~~~~~~~~~l~~~L~~~G~~v~~v~~~~~~----------------------~~~~~~~~l~~~~~~~~  104 (525)
T 3qp9_A           47 GLSGRWLVVVPEDRSAEAAPVLAALSGAGADPVQLDVSPLG----------------------DRQRLAATLGEALAAAG  104 (525)
T ss_dssp             CCCSEEEEEEEGGGCTTTHHHHHHHHHTTCEEEEEEECTTC----------------------CHHHHHHHHHHHHHHTT
T ss_pred             CCCCeEEEEECCCcchHHHHHHHHHHhcCCeEEEEeCCCCC----------------------CHHHHHHHHHhhhhccc
Confidence            45677777765543 28899999999999997666432211                      5555555555332 455


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +.++.++|..+.............        ...+.+.+.++|++..    .+...++..++....... +....-...
T Consensus       105 ~~~~~v~~l~~~~~~~~~~~~~~~--------~~g~~~~l~l~qal~~----~~~~~~l~~vT~ga~~~~-~~~~~~~p~  171 (525)
T 3qp9_A          105 GAVDGVLSLLAWDESAHPGHPAPF--------TRGTGATLTLVQALED----AGVAAPLWCVTHGAVSVG-RADHVTSPA  171 (525)
T ss_dssp             SCCSEEEECGGGCCCBCTTSCTTC--------BHHHHHHHHHHHHHHH----TTCCSCEEEEEESCCCCB-TTBCCSCHH
T ss_pred             CCCCeEEEcccCCCCccccccccc--------cchHHHHHHHHHHHHh----cCCCCcEEEEECCCEeCC-CCCCCCCHH
Confidence            678999999876433211111111        1346677888887653    222356666554432211 111223567


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEee
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVS  195 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~  195 (264)
                      ++++-+|.|.++.|+-....+...+-
T Consensus       172 ~a~l~Gl~r~~~~E~p~~~~~~vDl~  197 (525)
T 3qp9_A          172 QAMVWGMGRVAALEHPERWGGLIDLP  197 (525)
T ss_dssp             HHHHHHHHHHHHHHSTTTEEEEEEEC
T ss_pred             HHHHHHHHHHHHHhCCCceEEEEEcC
Confidence            89999999999999865444445553

>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*

Probab=95.02  E-value=0.58  Score=38.79  Aligned_cols=114  Identities=11%  Similarity=0.177  Sum_probs=62.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhh---hCC--CcEEEEEecCCCHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATS---IGV--GKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...++.|+|+ |.+|..++..|+.+|.  +++++..+.+.......+.   ...  ..+.+. .|  +.           
T Consensus         5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~~--~~-----------   69 (317)
T 3d0o_A            5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVK-AG--EY-----------   69 (317)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEE-EC--CG-----------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEE-eC--CH-----------
Confidence            3468999998 9999999999999884  5555544433222111111   100  122222 22  11           


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      +.+.+-|++|..+|.....     ..+..   +.+..|+.    +++.+.+.+.+..+.+.++++|.-
T Consensus        70 ~a~~~aDvVvi~ag~~~~~-----g~~r~---dl~~~n~~----i~~~i~~~i~~~~p~a~viv~tNP  125 (317)
T 3d0o_A           70 SDCHDADLVVICAGAAQKP-----GETRL---DLVSKNLK----IFKSIVGEVMASKFDGIFLVATNP  125 (317)
T ss_dssp             GGGTTCSEEEECCCCCCCT-----TCCHH---HHHHHHHH----HHHHHHHHHHHTTCCSEEEECSSS
T ss_pred             HHhCCCCEEEECCCCCCCC-----CCcHH---HHHHHHHH----HHHHHHHHHHHhCCCcEEEEecCc
Confidence            1223789999999875332     12322   34455554    344455555554446777776543

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=95.00  E-value=0.042  Score=45.67  Aligned_cols=37  Identities=22%  Similarity=0.514  Sum_probs=32.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      |+ +||+|++|++|...++.+...|++|+++.+++++.
T Consensus       148 g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~  184 (324)
T 3nx4_A          148 GE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTH  184 (324)
T ss_dssp             CC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             Ce-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHH
Confidence            45 99999999999999988888999988888776654

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=94.99  E-value=0.05  Score=46.18  Aligned_cols=45  Identities=16%  Similarity=0.373  Sum_probs=35.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT   58 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~   58 (264)
                      +|+||+++|.|. |.+|..+++.|.+.|++|+ +++...+..+.+.+
T Consensus       170 ~L~GktV~V~G~-G~VG~~~A~~L~~~GakVv-v~D~~~~~l~~~a~  214 (364)
T 1leh_A          170 SLEGLAVSVQGL-GNVAKALCKKLNTEGAKLV-VTDVNKAAVSAAVA  214 (364)
T ss_dssp             CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEE-EECSCHHHHHHHHH
T ss_pred             CCCcCEEEEECc-hHHHHHHHHHHHHCCCEEE-EEcCCHHHHHHHHH
Confidence            689999999986 8899999999999999977 55544443343333

>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1

Probab=94.96  E-value=0.48  Score=39.33  Aligned_cols=113  Identities=13%  Similarity=0.227  Sum_probs=61.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           16 KVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++.|+|+ |.+|.+++..|+..+.  +++++....++......+....    ..+.+. .|  +           .+.+
T Consensus         6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~-~~--~-----------~~a~   70 (318)
T 1ez4_A            6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIY-SG--E-----------YSDC   70 (318)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEE-EC--C-----------GGGG
T ss_pred             CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEE-EC--C-----------HHHh
Confidence            57999998 9999999999999875  5555555433332222222111    122222 22  1           1123


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .+-|++|..+|......     .+   -.+.+..|+.    +++.+.+.+.+..+.+.++++|.-.
T Consensus        71 ~~aDvVii~ag~~~~~g-----~~---R~dl~~~n~~----i~~~i~~~i~~~~p~a~iiv~tNPv  124 (318)
T 1ez4_A           71 KDADLVVITAGAPQKPG-----ES---RLDLVNKNLN----ILSSIVKPVVDSGFDGIFLVAANPV  124 (318)
T ss_dssp             TTCSEEEECCCC------------------CHHHHHH----HHHHHHHHHHHTTCCSEEEECSSSH
T ss_pred             CCCCEEEECCCCCCCCC-----CC---HHHHHHHHHH----HHHHHHHHHHHhCCCeEEEEeCCcH
Confidence            47899999998743221     11   2233444444    4555555566655577888875443

>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*

Probab=94.92  E-value=0.015  Score=48.57  Aligned_cols=115  Identities=13%  Similarity=0.153  Sum_probs=65.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhC-----CCcEEEE-EecCCCHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIG-----VGKCHYV-HCDVTNECQVKALVDSTV   86 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~~D~s~~~~~~~~~~~~~   86 (264)
                      +.+++.|+|+ |.+|.+++..|+..|. +++++....+.......+...     .....+. ..|   .           
T Consensus         6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d---~-----------   70 (324)
T 3gvi_A            6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGAND---Y-----------   70 (324)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESS---G-----------
T ss_pred             cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCC---H-----------
Confidence            4578999998 9999999999999998 867776665543222111111     0011111 122   1           


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      +.+.+-|++|..+|......     .   .-.+.+..|+.-    ++.+.+.+.+..+.+.++++|.-.
T Consensus        71 ~a~~~aDiVIiaag~p~k~G-----~---~R~dl~~~N~~i----~~~i~~~i~~~~p~a~iivvtNPv  127 (324)
T 3gvi_A           71 AAIEGADVVIVTAGVPRKPG-----M---SRDDLLGINLKV----MEQVGAGIKKYAPEAFVICITNPL  127 (324)
T ss_dssp             GGGTTCSEEEECCSCCCC-------------CHHHHHHHHH----HHHHHHHHHHHCTTCEEEECCSSH
T ss_pred             HHHCCCCEEEEccCcCCCCC-----C---CHHHHHHhhHHH----HHHHHHHHHHHCCCeEEEecCCCc
Confidence            12237899999998643221     1   222345555544    444445555544467888877543

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=94.92  E-value=0.057  Score=46.35  Aligned_cols=78  Identities=22%  Similarity=0.227  Sum_probs=48.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-C-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-G-   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~-   90 (264)
                      .|.++||+|+ |++|...++.+...|+ +|+.+.++.++. +.+. .+  +. ..  .|..+.+.+   .+++++.. + 
T Consensus       185 ~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~-~~a~-~l--Ga-~~--i~~~~~~~~---~~~~~~~~~g~  253 (398)
T 2dph_A          185 PGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERL-KLLS-DA--GF-ET--IDLRNSAPL---RDQIDQILGKP  253 (398)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHH-HHHH-TT--TC-EE--EETTSSSCH---HHHHHHHHSSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH-Hc--CC-cE--EcCCCcchH---HHHHHHHhCCC
Confidence            5889999996 9999999887777899 777777665543 3332 22  22 22  355442211   12222221 2 


Q ss_pred             CccEEEEcCCCC
Q 041914           91 QLDIMFSNAGIL  102 (264)
Q Consensus        91 ~id~lv~~ag~~  102 (264)
                      .+|++|.++|..
T Consensus       254 g~Dvvid~~g~~  265 (398)
T 2dph_A          254 EVDCGVDAVGFE  265 (398)
T ss_dssp             CEEEEEECSCTT
T ss_pred             CCCEEEECCCCc
Confidence            699999999853

>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...

Probab=94.91  E-value=0.34  Score=40.44  Aligned_cols=117  Identities=11%  Similarity=0.064  Sum_probs=66.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ...+++.|+|+ |.+|.+++..|+.+|.  +++++....+.......+....    .....+..  .|.+          
T Consensus        17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~~--~d~~----------   83 (331)
T 4aj2_A           17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVSS--KDYS----------   83 (331)
T ss_dssp             CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEEC--SSGG----------
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEEc--CCHH----------
Confidence            45688999997 9999999999999987  5555555433332222222111    11122222  1211          


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                       ...+-|++|.++|....+     ..+   -.+.++.|+.=...+.+    .+.+..+.+.++++|.-.
T Consensus        84 -~~~~aDiVvi~aG~~~kp-----G~t---R~dL~~~N~~I~~~i~~----~i~~~~p~a~vlvvtNPv  139 (331)
T 4aj2_A           84 -VTANSKLVIITAGARQQE-----GES---RLNLVQRNVNIFKFIIP----NVVKYSPQCKLLIVSNPV  139 (331)
T ss_dssp             -GGTTEEEEEECCSCCCCT-----TCC---GGGGHHHHHHHHHHHHH----HHHHHCTTCEEEECSSSH
T ss_pred             -HhCCCCEEEEccCCCCCC-----Ccc---HHHHHHHHHHHHHHHHH----HHHHHCCCeEEEEecChH
Confidence             123789999999975322     122   23456666654444444    444444367888887544

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=94.90  E-value=0.18  Score=42.24  Aligned_cols=76  Identities=20%  Similarity=0.288  Sum_probs=46.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--C
Q 041914           14 EGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--G   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~   90 (264)
                      .|.++||+|+ |++|...++.+... |++|+++.+++++. +.+. .+..+.  .+  |..+ +    +.+++++..  .
T Consensus       171 ~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~-~~~~-~lGa~~--~i--~~~~-~----~~~~v~~~t~g~  238 (345)
T 3jv7_A          171 PGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRL-ALAR-EVGADA--AV--KSGA-G----AADAIRELTGGQ  238 (345)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHH-HHHH-HTTCSE--EE--ECST-T----HHHHHHHHHGGG
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH-HHHH-HcCCCE--EE--cCCC-c----HHHHHHHHhCCC
Confidence            5899999998 99999888776666 77877776665543 3332 233222  22  2222 2    222333322  2


Q ss_pred             CccEEEEcCCC
Q 041914           91 QLDIMFSNAGI  101 (264)
Q Consensus        91 ~id~lv~~ag~  101 (264)
                      ++|++|.+.|.
T Consensus       239 g~d~v~d~~G~  249 (345)
T 3jv7_A          239 GATAVFDFVGA  249 (345)
T ss_dssp             CEEEEEESSCC
T ss_pred             CCeEEEECCCC
Confidence            79999999874

>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*

Probab=94.86  E-value=0.066  Score=45.77  Aligned_cols=70  Identities=20%  Similarity=0.238  Sum_probs=49.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +.+|+++|.|+. .+|+.+++.+.+.|++|+++...........       .-..+..|..|.+.+.++++       +.
T Consensus        12 ~~~k~IlIlG~G-~~g~~la~aa~~~G~~vi~~d~~~~~~~~~~-------ad~~~~~~~~d~~~l~~~~~-------~~   76 (389)
T 3q2o_A           12 LPGKTIGIIGGG-QLGRMMALAAKEMGYKIAVLDPTKNSPCAQV-------ADIEIVASYDDLKAIQHLAE-------IS   76 (389)
T ss_dssp             CTTSEEEEECCS-HHHHHHHHHHHHTTCEEEEEESSTTCTTTTT-------CSEEEECCTTCHHHHHHHHH-------TC
T ss_pred             CCCCEEEEECCC-HHHHHHHHHHHHcCCEEEEEeCCCCCchHHh-------CCceEecCcCCHHHHHHHHH-------hC
Confidence            689999999875 5999999999999999888865433211110       11345578888888877775       46


Q ss_pred             cEEEE
Q 041914           93 DIMFS   97 (264)
Q Consensus        93 d~lv~   97 (264)
                      |++..
T Consensus        77 dvI~~   81 (389)
T 3q2o_A           77 DVVTY   81 (389)
T ss_dssp             SEEEE
T ss_pred             CEeee
Confidence            77643

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=94.82  E-value=0.018  Score=54.13  Aligned_cols=75  Identities=13%  Similarity=0.228  Sum_probs=47.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|.+|||.||+|++|...++.....|++|+.+.+.. +. +.+ + +..+.  .+  |..+.+    +.+++++..  .+
T Consensus       345 ~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~-~~l-~-lga~~--v~--~~~~~~----~~~~i~~~t~g~G  412 (795)
T 3slk_A          345 PGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KW-QAV-E-LSREH--LA--SSRTCD----FEQQFLGATGGRG  412 (795)
T ss_dssp             TTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GG-GGS-C-SCGGG--EE--CSSSST----HHHHHHHHSCSSC
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hh-hhh-h-cChhh--ee--ecCChh----HHHHHHHHcCCCC
Confidence            589999999999999999988778899988777543 22 111 1 21111  22  333332    233444433  26


Q ss_pred             ccEEEEcCC
Q 041914           92 LDIMFSNAG  100 (264)
Q Consensus        92 id~lv~~ag  100 (264)
                      +|+++++.|
T Consensus       413 vDvVld~~g  421 (795)
T 3slk_A          413 VDVVLNSLA  421 (795)
T ss_dssp             CSEEEECCC
T ss_pred             eEEEEECCC
Confidence            999999876

>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*

Probab=94.80  E-value=0.046  Score=45.82  Aligned_cols=37  Identities=19%  Similarity=0.172  Sum_probs=30.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDEL   52 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~   52 (264)
                      ..++.|+|+ |.+|.+++..|+..|. +|+++.++.+..
T Consensus         9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~   46 (331)
T 1pzg_A            9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMP   46 (331)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHH
Confidence            357999998 9999999999999998 866666665444

>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*

Probab=94.79  E-value=0.7  Score=38.46  Aligned_cols=115  Identities=14%  Similarity=0.181  Sum_probs=63.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +..++.|+|+ |.+|.+++..|+..+.  +++++....++......+....    ..+.+. .|  +.           +
T Consensus         8 ~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~-~~--~~-----------~   72 (326)
T 2zqz_A            8 DHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIY-SA--EY-----------S   72 (326)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEE-EC--CG-----------G
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEE-EC--CH-----------H
Confidence            4478999999 9999999999998875  5555555433332222222221    122222 22  11           1


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .+.+-|++|..+|.....     ..+.   .+.+..|+.-    ++.+.+.+.+..+.+.++++|.-.
T Consensus        73 a~~~aDvVii~ag~~~k~-----g~~R---~dl~~~n~~i----~~~i~~~i~~~~p~a~iiv~tNPv  128 (326)
T 2zqz_A           73 DAKDADLVVITAGAPQKP-----GETR---LDLVNKNLKI----LKSIVDPIVDSGFNGIFLVAANPV  128 (326)
T ss_dssp             GGGGCSEEEECCCCC----------CH---HHHHHHHHHH----HHHHHHHHHHHTCCSEEEECSSSH
T ss_pred             HhCCCCEEEEcCCCCCCC-----CCCH---HHHHHHHHHH----HHHHHHHHHHHCCCeEEEEeCCcH
Confidence            123689999999874321     1232   2345555544    444444455544467888875443

>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}

Probab=94.79  E-value=0.16  Score=42.96  Aligned_cols=33  Identities=24%  Similarity=0.326  Sum_probs=24.1

Q ss_pred             cEEEEe-CCCChh---HHHHHHHHHHcCCcEEEEecC
Q 041914           16 KVAIIT-GGASGI---GETTARLFADHGARMIVIADI   48 (264)
Q Consensus        16 k~vlIt-Gas~gi---G~~ia~~l~~~g~~v~~~~~~   48 (264)
                      |+++|+ |||+|-   +.+++++|.++|++|..++..
T Consensus         3 ~~i~i~~GGTgGHi~palala~~L~~~g~~V~~vg~~   39 (365)
T 3s2u_A            3 GNVLIMAGGTGGHVFPALACAREFQARGYAVHWLGTP   39 (365)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred             CcEEEEcCCCHHHHHHHHHHHHHHHhCCCEEEEEECC
Confidence            445555 556543   678999999999998887754

>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}

Probab=94.75  E-value=0.058  Score=45.32  Aligned_cols=39  Identities=18%  Similarity=0.082  Sum_probs=33.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++.||++.|.|. |.||+++|+.|...|.+|++..+...
T Consensus       167 ~~l~gktiGIIGl-G~IG~~vA~~l~~~G~~V~~~dr~~~  205 (340)
T 4dgs_A          167 HSPKGKRIGVLGL-GQIGRALASRAEAFGMSVRYWNRSTL  205 (340)
T ss_dssp             CCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             ccccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCcc
Confidence            5789999999987 89999999999999999777666544

>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*

Probab=94.72  E-value=0.19  Score=42.09  Aligned_cols=34  Identities=18%  Similarity=0.352  Sum_probs=29.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      ++++++|+|.|+ ||+|.++++.|+..|..-+.+.
T Consensus        31 kL~~~~VlIvGa-GGlGs~va~~La~aGVg~Itlv   64 (340)
T 3rui_A           31 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFV   64 (340)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEE
T ss_pred             HHhCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEe
Confidence            467899999987 8999999999999998755554

>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*

Probab=94.67  E-value=0.25  Score=42.69  Aligned_cols=73  Identities=12%  Similarity=0.184  Sum_probs=51.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .+++||+|+ +.+|+.+++.+.+.|++|+++............     +  ..+..|..|.+.+.+++++.     ++|.
T Consensus        19 ~~~ili~g~-g~~g~~~~~a~~~~G~~v~~v~~~~~~~~~~~a-----d--~~~~~~~~d~~~l~~~~~~~-----~~d~   85 (433)
T 2dwc_A           19 AQKILLLGS-GELGKEIAIEAQRLGVEVVAVDRYANAPAMQVA-----H--RSYVGNMMDKDFLWSVVERE-----KPDA   85 (433)
T ss_dssp             CCEEEEESC-SHHHHHHHHHHHHTTCEEEEEESSTTCHHHHHS-----S--EEEESCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECCCCChhhhhc-----c--eEEECCCCCHHHHHHHHHHc-----CCCE
Confidence            468999987 579999999999999998888765443222111     1  24567888887776665532     7899


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      ++...+
T Consensus        86 V~~~~e   91 (433)
T 2dwc_A           86 IIPEIE   91 (433)
T ss_dssp             EEECSS
T ss_pred             EEECcc
Confidence            987553

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=94.66  E-value=0.064  Score=44.20  Aligned_cols=41  Identities=29%  Similarity=0.306  Sum_probs=35.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..++.|++++|.|+ |.+|+++++.|...|++|++..|+.++
T Consensus       152 ~~~l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~  192 (300)
T 2rir_A          152 DYTIHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAH  192 (300)
T ss_dssp             SSCSTTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCCCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHH
Confidence            35789999999996 999999999999999997777776543

>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A

Probab=94.60  E-value=0.68  Score=38.25  Aligned_cols=151  Identities=9%  Similarity=0.019  Sum_probs=78.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           16 KVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++.|+|+ |.+|.+++..|+..+  .+++++....++......+....    ..+.+.. +  +.+           .+
T Consensus         1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~-~--~~~-----------a~   65 (310)
T 2xxj_A            1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWA-G--SYG-----------DL   65 (310)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEE-C--CGG-----------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEE-C--CHH-----------Hh
Confidence            36889998 999999999999986  46555555433332222222221    1222222 2  211           12


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------CCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------GGK  161 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------~~~  161 (264)
                      .+-|++|..+|.....     ..+..   +.+..|+.-    ++.+.+.+.+..+.+.++++|.-....        +.|
T Consensus        66 ~~aD~Vii~ag~~~~~-----g~~r~---dl~~~n~~i----~~~i~~~i~~~~p~a~iiv~tNPv~~~t~~~~k~s~~p  133 (310)
T 2xxj_A           66 EGARAVVLAAGVAQRP-----GETRL---QLLDRNAQV----FAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLP  133 (310)
T ss_dssp             TTEEEEEECCCCCCCT-----TCCHH---HHHHHHHHH----HHHHHHHHHHHCTTCEEEECSSSHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEECCCCCCCC-----CcCHH---HHHHhhHHH----HHHHHHHHHHHCCCcEEEEecCchHHHHHHHHHHcCCC
Confidence            3789999999875332     12333   345555544    444444555544467888875443321        123


Q ss_pred             CCchhhc-hHHHHHHHHHHHHHHhC--cCCceEEE
Q 041914          162 RRTDYHM-SKHAVIGLVRSASVQLG--VHGIRVNC  193 (264)
Q Consensus       162 ~~~~y~~-sK~al~~~~~~la~e~~--~~~i~v~~  193 (264)
                      ..-..+. .-.=...+...++..+.  +..|+...
T Consensus       134 ~~rviG~gt~LD~~R~~~~la~~lgv~~~~v~~~v  168 (310)
T 2xxj_A          134 PGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYV  168 (310)
T ss_dssp             GGGEEECTTHHHHHHHHHHHHHHHTSCGGGEEEEE
T ss_pred             HHHEEecCcchhHHHHHHHHHHHhCcCHHHeEEEE
Confidence            2233343 22223445556666553  33455533

>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1

Probab=94.59  E-value=0.61  Score=38.88  Aligned_cols=115  Identities=12%  Similarity=0.031  Sum_probs=65.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEE-EecCCCHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYV-HCDVTNECQVKALVDSTV   86 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~D~s~~~~~~~~~~~~~   86 (264)
                      ..+++.|+|+ |.+|..++..|+..|.  +++++....+.......+....    ...... ..|..+            
T Consensus        20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t~d~~~------------   86 (330)
T 3ldh_A           20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSGKDYSV------------   86 (330)
T ss_dssp             CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEESSSCS------------
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEcCCHHH------------
Confidence            4578999999 9999999999999987  6666655444332222211110    011122 233321            


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                        +.+-|++|..+|....+.     .+   -.+.+..|+.-    .+.+.+.+.+..+.+.++++|.-.
T Consensus        87 --~~daDiVIitaG~p~kpG-----~t---R~dll~~N~~I----~k~i~~~I~k~~P~a~ilvvtNPv  141 (330)
T 3ldh_A           87 --SAGSKLVVITAGARQQEG-----ES---RLNLVQRNVNI----FKFIIPNIVKHSPDCLKELHPELG  141 (330)
T ss_dssp             --CSSCSEEEECCSCCCCSS-----CC---TTGGGHHHHHH----HHHHHHHHHHHCTTCEEEECSSSH
T ss_pred             --hCCCCEEEEeCCCCCCCC-----CC---HHHHHHhhHHH----HHHHHHHHHhhCCCceEEeCCCcc
Confidence              237899999999754321     11   12345555543    444444445444467888877543

>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}

Probab=94.59  E-value=0.27  Score=39.40  Aligned_cols=87  Identities=15%  Similarity=0.265  Sum_probs=50.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhC-----C-----CcEEEEEecCCCHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIG-----V-----GKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~-----~-----~~~~~~~~D~s~~~~~~~~   81 (264)
                      +.+.++.|.|+ |.+|..+++.|++.|++ |.+..|+.+.. +.+.+...     .     ....++-. ...+..+..+
T Consensus         8 ~~~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~Dvvi~-av~~~~~~~v   84 (266)
T 3d1l_A            8 IEDTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESA-RELAQKVEAEYTTDLAEVNPYAKLYIV-SLKDSAFAEL   84 (266)
T ss_dssp             GGGCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHH-HHHHHHTTCEEESCGGGSCSCCSEEEE-CCCHHHHHHH
T ss_pred             CCCCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHH-HHHHHHcCCceeCCHHHHhcCCCEEEE-ecCHHHHHHH
Confidence            44457889986 99999999999999999 55555554433 33333211     0     01111111 2234456777


Q ss_pred             HHHHHHhcCCccEEEEcCCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGIL  102 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~  102 (264)
                      ++++.+...+=.++|++.+..
T Consensus        85 ~~~l~~~~~~~~ivv~~s~~~  105 (266)
T 3d1l_A           85 LQGIVEGKREEALMVHTAGSI  105 (266)
T ss_dssp             HHHHHTTCCTTCEEEECCTTS
T ss_pred             HHHHHhhcCCCcEEEECCCCC
Confidence            777765433334677776543

>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}

Probab=94.58  E-value=0.67  Score=38.38  Aligned_cols=113  Identities=17%  Similarity=0.138  Sum_probs=63.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhC-----CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIG-----VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.|+|+ |.+|.+++..|+..|.  +++++....+.......+...     .........|.  .           +.+
T Consensus         2 kv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~~~--~-----------~a~   67 (314)
T 3nep_X            2 KVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGTND--Y-----------GPT   67 (314)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEESS--S-----------GGG
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEECCC--H-----------HHh
Confidence            5788996 9999999999999986  666666655443222211111     01122221221  1           123


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      .+-|++|.++|....+        -+.-.+.++.|+.    +++.+.+.+.+..+++.++++|.-.
T Consensus        68 ~~aDvVii~ag~~~kp--------G~~R~dl~~~N~~----i~~~i~~~i~~~~p~a~vivvtNPv  121 (314)
T 3nep_X           68 EDSDVCIITAGLPRSP--------GMSRDDLLAKNTE----IVGGVTEQFVEGSPDSTIIVVANPL  121 (314)
T ss_dssp             TTCSEEEECCCC---------------CHHHHHHHHH----HHHHHHHHHHTTCTTCEEEECCSSH
T ss_pred             CCCCEEEECCCCCCCC--------CCCHHHHHHhhHH----HHHHHHHHHHHhCCCcEEEecCCch
Confidence            4789999999874321        1123345566654    4555556666655567888777543

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=94.58  E-value=0.061  Score=44.17  Aligned_cols=40  Identities=30%  Similarity=0.361  Sum_probs=34.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .++.|++++|.| .|++|+++++.|...|++|++..|+.++
T Consensus       151 ~~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~  190 (293)
T 3d4o_A          151 FTIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDL  190 (293)
T ss_dssp             SCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHH
T ss_pred             CCCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHH
Confidence            468999999999 5899999999999999997777776544

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=94.49  E-value=0.27  Score=42.70  Aligned_cols=40  Identities=30%  Similarity=0.386  Sum_probs=33.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ...+.||+++|.|. |.||+.+|+.+...|++|++..+.+.
T Consensus       242 g~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~  281 (464)
T 3n58_A          242 DVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPI  281 (464)
T ss_dssp             CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred             CCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence            34689999999995 67999999999999999776655443

>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*

Probab=94.46  E-value=0.17  Score=43.03  Aligned_cols=73  Identities=10%  Similarity=0.178  Sum_probs=50.6

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ..+++||+|+ +.+|+.+++.+.+.|++|+++..........    .. +  ..+..|..|.+.+.+++++.     ++|
T Consensus        10 ~~~~ili~g~-g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~----~~-d--~~~~~~~~d~~~l~~~~~~~-----~~d   76 (391)
T 1kjq_A           10 AATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYADAPAMH----VA-H--RSHVINMLDGDALRRVVELE-----KPH   76 (391)
T ss_dssp             TCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTTCGGGG----GS-S--EEEECCTTCHHHHHHHHHHH-----CCS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEECCCCCchhh----hc-c--ceEECCCCCHHHHHHHHHHc-----CCC
Confidence            4578999987 5799999999999999988877654321111    11 1  34567888887766665532     789


Q ss_pred             EEEEcC
Q 041914           94 IMFSNA   99 (264)
Q Consensus        94 ~lv~~a   99 (264)
                      .++...
T Consensus        77 ~v~~~~   82 (391)
T 1kjq_A           77 YIVPEI   82 (391)
T ss_dssp             EEEECS
T ss_pred             EEEECC
Confidence            998754

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=94.45  E-value=0.041  Score=44.81  Aligned_cols=74  Identities=8%  Similarity=0.275  Sum_probs=47.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .++.+++++|.|+ |++|+++++.|.+.|++|.+..|+.++ .+.+.+..   .+..  .+  +.   .+.+       .
T Consensus       125 ~~~~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~-~~~l~~~~---g~~~--~~--~~---~~~~-------~  185 (275)
T 2hk9_A          125 PEVKEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEK-AIKLAQKF---PLEV--VN--SP---EEVI-------D  185 (275)
T ss_dssp             TTGGGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHH-HHHHTTTS---CEEE--CS--CG---GGTG-------G
T ss_pred             CCcCCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHH-HHHHHHHc---CCee--eh--hH---Hhhh-------c
Confidence            3578899999996 799999999999999976555555433 33333322   1211  11  11   1111       2


Q ss_pred             CccEEEEcCCCCC
Q 041914           91 QLDIMFSNAGILS  103 (264)
Q Consensus        91 ~id~lv~~ag~~~  103 (264)
                      ..|++|++.+...
T Consensus       186 ~aDiVi~atp~~~  198 (275)
T 2hk9_A          186 KVQVIVNTTSVGL  198 (275)
T ss_dssp             GCSEEEECSSTTS
T ss_pred             CCCEEEEeCCCCC
Confidence            6799999987653

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=94.40  E-value=0.048  Score=44.30  Aligned_cols=40  Identities=13%  Similarity=0.232  Sum_probs=34.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHc--CCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADH--GARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~--g~~v~~~~~~~   49 (264)
                      ..++.||+++|.|++.-+|+.+++.|.++  |++|.++.++.
T Consensus       153 ~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t  194 (281)
T 2c2x_A          153 DISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGT  194 (281)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTC
T ss_pred             CCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECch
Confidence            34799999999999888999999999999  89977775544

>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*

Probab=94.37  E-value=0.53  Score=38.87  Aligned_cols=111  Identities=12%  Similarity=0.137  Sum_probs=58.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCC-----CcEEEEE-ecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGV-----GKCHYVH-CDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++.|+|+ |.+|..++..|+..|. +|+++..+.+.......+....     ....... .|.              +.
T Consensus         3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~--------------~a   67 (309)
T 1ur5_A            3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY--------------AD   67 (309)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG--------------GG
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH--------------HH
Confidence            57899998 9999999999999996 8555555544332222222111     0111111 121              11


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      +.+.|++|.++|......     .+   -.+.+..|..    +.+.+.+.+.+....+.++++|.
T Consensus        68 ~~~aD~Vi~a~g~p~~~g-----~~---r~dl~~~n~~----i~~~i~~~i~~~~p~a~vi~~tN  120 (309)
T 1ur5_A           68 TANSDVIVVTSGAPRKPG-----MS---REDLIKVNAD----ITRACISQAAPLSPNAVIIMVNN  120 (309)
T ss_dssp             GTTCSEEEECCCC----------------CHHHHHHHH----HHHHHHHHHGGGCTTCEEEECCS
T ss_pred             HCCCCEEEEcCCCCCCCC-----CC---HHHHHHHHHH----HHHHHHHHHHhhCCCeEEEEcCC
Confidence            237899999998743221     11   1123334433    44555555565543556666543

>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}

Probab=94.34  E-value=0.41  Score=39.39  Aligned_cols=111  Identities=13%  Similarity=0.140  Sum_probs=57.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.|+|+ |.+|..++..|+..|.  +|+++.++.+.......+....    .......   .+.           +...
T Consensus         2 kI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~---~~~-----------~a~~   66 (304)
T 2v6b_A            2 KVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH---GGH-----------SELA   66 (304)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE---ECG-----------GGGT
T ss_pred             EEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE---CCH-----------HHhC
Confidence            6889998 9999999999999998  8777766654332222222111    1111111   121           1123


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      +.|++|.+++......        +.-.+.+..|+.-.-.+.+.+.++    ...+.+++++..
T Consensus        67 ~aDvVIi~~~~~~~~g--------~~r~dl~~~n~~i~~~i~~~i~~~----~p~~~vi~~tNP  118 (304)
T 2v6b_A           67 DAQVVILTAGANQKPG--------ESRLDLLEKNADIFRELVPQITRA----APDAVLLVTSNP  118 (304)
T ss_dssp             TCSEEEECC--------------------CHHHHHHHHHHHHHHHHHH----CSSSEEEECSSS
T ss_pred             CCCEEEEcCCCCCCCC--------CcHHHHHHhHHHHHHHHHHHHHHh----CCCeEEEEecCc
Confidence            7899999997643211        112234555555444445544443    225666665543

>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}

Probab=94.32  E-value=1.8  Score=35.31  Aligned_cols=168  Identities=10%  Similarity=0.080  Sum_probs=94.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCch-h-hHH-----------------HHHhhhCCCcEEEEEecCCCH
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQD-E-LGR-----------------QVATSIGVGKCHYVHCDVTNE   75 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~-~-~~~-----------------~~~~~~~~~~~~~~~~D~s~~   75 (264)
                      -+|.|.|++|.+|+.+++.+.+. +.+++.+..+.. + ..+                 .+.+.+....   +-.|++.+
T Consensus        22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G~~~~gv~v~~dl~~ll~~aD---VvIDFT~p   98 (288)
T 3ijp_A           22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIGSDFLGVRITDDPESAFSNTE---GILDFSQP   98 (288)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTTCSCCSCBCBSCHHHHTTSCS---EEEECSCH
T ss_pred             eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhccCcCCceeeCCHHHHhcCCC---EEEEcCCH
Confidence            47999999999999999998865 667666655432 1 100                 1111122112   44699999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHH-----------HhhHHHHHHHHHHHHHHHHHcCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRL-----------FAINVRGMAACVKHAARVMVEGGV  144 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~-----------~~~n~~~~~~l~~~~l~~~~~~~~  144 (264)
                      +.....+....+.  ++++|+-+.|.. +       ...+.+++.           |.+-+.-.+.+++.+.++|..   
T Consensus        99 ~a~~~~~~~~l~~--Gv~vViGTTG~~-~-------e~~~~L~~aa~~~~~~~a~N~SiGv~ll~~l~~~aa~~l~~---  165 (288)
T 3ijp_A           99 QASVLYANYAAQK--SLIHIIGTTGFS-K-------TEEAQIADFAKYTTIVKSGNMSLGVNLLANLVKRAAKALDD---  165 (288)
T ss_dssp             HHHHHHHHHHHHH--TCEEEECCCCCC-H-------HHHHHHHHHHTTSEEEECSCCCHHHHHHHHHHHHHHHHSCT---
T ss_pred             HHHHHHHHHHHHc--CCCEEEECCCCC-H-------HHHHHHHHHhCcCCEEEECCCcHHHHHHHHHHHHHHHhcCC---
Confidence            9888888877776  788998777631 1       012233331           222233344555555555541   


Q ss_pred             CcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHh---------------CcCCceEEEeeCCcccCc
Q 041914          145 RGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL---------------GVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       145 ~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~---------------~~~~i~v~~v~pG~v~t~  202 (264)
                      .-.|=.+   ......+-..+-+.+..-.+.+.+.+...+               .+.+|.+.++.-|.+..+
T Consensus       166 ~~dieIi---E~HH~~K~DaPSGTA~~la~~i~~~~~~~~~~~~~~~r~g~~g~r~~~~i~i~s~R~g~ivg~  235 (288)
T 3ijp_A          166 DFDIEIY---EMHHANKVDSPSGTALLLGQAAAEGRNIMLKNVSVNGRSGHTGKREKGTIGFACSRGGTVIGD  235 (288)
T ss_dssp             TSEEEEE---EEECTTCCCSSCHHHHHHHHHHHHHTTSCHHHHEEECGGGCCSCCCTTCEEEEEEECTTCCEE
T ss_pred             CCCEEEE---EccCCCCCCCCCHHHHHHHHHHHHHhCCCcccccccccccccCCcCCCCccEEEEECCCCCEE
Confidence            1122211   223333444445666665555555443221               124689999998877654

>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A

Probab=94.32  E-value=0.76  Score=37.98  Aligned_cols=36  Identities=11%  Similarity=0.198  Sum_probs=29.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhh
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDEL   52 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~   52 (264)
                      +++.|.|+ |.+|..++..|++.|. +|+++.++.+..
T Consensus         5 ~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~   41 (317)
T 2ewd_A            5 RKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIP   41 (317)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHH
T ss_pred             CEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHH
Confidence            57899998 9999999999999998 877777665443

>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}

Probab=94.23  E-value=0.18  Score=41.38  Aligned_cols=84  Identities=11%  Similarity=0.105  Sum_probs=53.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---C----CcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---V----GKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++.|.| .|.+|..+++.|++.|++|++..|+.+...+.......   .    ....++-.=+.+...++.+++++.+.
T Consensus        16 ~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~~~~aDvvi~~vp~~~~~~~v~~~l~~~   94 (296)
T 3qha_A           16 LKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEAGATLADSVADVAAADLIHITVLDDAQVREVVGELAGH   94 (296)
T ss_dssp             CCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHTTCEECSSHHHHTTSSEEEECCSSHHHHHHHHHHHHTT
T ss_pred             CeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHCCCEEcCCHHHHHhCCEEEEECCChHHHHHHHHHHHHh
Confidence            4677776 68999999999999999988777766554332211100   0    00233444456677788888777765


Q ss_pred             cCCccEEEEcCC
Q 041914           89 YGQLDIMFSNAG  100 (264)
Q Consensus        89 ~~~id~lv~~ag  100 (264)
                      ..+-.++|++..
T Consensus        95 l~~g~ivv~~st  106 (296)
T 3qha_A           95 AKPGTVIAIHST  106 (296)
T ss_dssp             CCTTCEEEECSC
T ss_pred             cCCCCEEEEeCC
Confidence            444456666654

>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A

Probab=94.05  E-value=0.27  Score=44.38  Aligned_cols=35  Identities=20%  Similarity=0.387  Sum_probs=29.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      ++++++|+|.|+ ||+|.++++.|+..|..-+.+.+
T Consensus       323 kL~~arVLIVGa-GGLGs~vA~~La~aGVG~ItLvD  357 (615)
T 4gsl_A          323 IIKNTKVLLLGA-GTLGCYVSRALIAWGVRKITFVD  357 (615)
T ss_dssp             HHHTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             HHhCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEc
Confidence            467899999987 79999999999999987555543

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=94.04  E-value=0.18  Score=42.19  Aligned_cols=76  Identities=24%  Similarity=0.301  Sum_probs=44.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC--
Q 041914           14 EGKVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG--   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~--   90 (264)
                      .|.++||+|+ +++|...+..++.. |++|+++.+++++. +. .......  ..  .|.++.+..    +++++..+  
T Consensus       163 ~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~-~~-~~~~Ga~--~~--i~~~~~~~~----~~v~~~t~g~  231 (348)
T 4eez_A          163 PGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKL-NL-AKKIGAD--VT--INSGDVNPV----DEIKKITGGL  231 (348)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHH-HH-HHHTTCS--EE--EEC-CCCHH----HHHHHHTTSS
T ss_pred             CCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHh-hh-hhhcCCe--EE--EeCCCCCHH----HHhhhhcCCC
Confidence            5889999987 77887777777765 77877777765543 22 2222222  22  244443333    33333322  


Q ss_pred             CccEEEEcCC
Q 041914           91 QLDIMFSNAG  100 (264)
Q Consensus        91 ~id~lv~~ag  100 (264)
                      .+|.++.+++
T Consensus       232 g~d~~~~~~~  241 (348)
T 4eez_A          232 GVQSAIVCAV  241 (348)
T ss_dssp             CEEEEEECCS
T ss_pred             CceEEEEecc
Confidence            5788887765

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=94.03  E-value=0.23  Score=41.20  Aligned_cols=86  Identities=13%  Similarity=0.092  Sum_probs=52.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh----CC-----CcEEEEEecCCCHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GV-----GKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~----~~-----~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      ...+++.|.|. |.+|..+++.|++.|++|++..|+.+.. +.+.+.-    ..     ....++-.=+.+...++.++.
T Consensus        29 ~~~~~I~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~-~~l~~~g~~~~~~~~e~~~~aDvVi~~vp~~~~~~~v~~  106 (320)
T 4dll_A           29 PYARKITFLGT-GSMGLPMARRLCEAGYALQVWNRTPARA-ASLAALGATIHEQARAAARDADIVVSMLENGAVVQDVLF  106 (320)
T ss_dssp             CCCSEEEEECC-TTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHTTTCEEESSHHHHHTTCSEEEECCSSHHHHHHHHT
T ss_pred             cCCCEEEEECc-cHHHHHHHHHHHhCCCeEEEEcCCHHHH-HHHHHCCCEeeCCHHHHHhcCCEEEEECCCHHHHHHHHc
Confidence            44568888865 9999999999999999977776665543 3322210    00     112233334455667777765


Q ss_pred             --HHHHhcCCccEEEEcCC
Q 041914           84 --STVQNYGQLDIMFSNAG  100 (264)
Q Consensus        84 --~~~~~~~~id~lv~~ag  100 (264)
                        .+.+...+-.++|++..
T Consensus       107 ~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          107 AQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             TTCHHHHCCTTCEEEECSC
T ss_pred             chhHHhhCCCCCEEEecCC
Confidence              55554444456666654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	264
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	2e-67
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	3e-67
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	3e-64
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	7e-63
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	2e-62
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	3e-61
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	3e-60
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	4e-59
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-56
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	4e-56
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	7e-56
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	1e-55
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	2e-55
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	2e-55
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	3e-55
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	7e-55
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	2e-54
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-54
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	4e-54
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	4e-54
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	1e-53
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	1e-52
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	2e-52
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-52
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-52
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	6e-52
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	2e-51
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	2e-51
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	2e-51
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	3e-50
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-50
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	2e-49
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	4e-49
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	6e-49
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	6e-49
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	8e-49
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-48
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	3e-47
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	4e-47
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-46
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-46
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-45
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	7e-45
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-44
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-43
d1ulua_	256	c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermoph	5e-43
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	3e-41
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-41
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	2e-39
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	3e-39
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	5e-38
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	6e-38
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	9e-37
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	6e-36
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	2e-32
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	3e-32
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	4e-31
d2pd4a1	274	c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacte	4e-30
d1fjha_	257	c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase	8e-30
d1e7wa_	284	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	8e-29
d2h7ma1	268	c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacteri	5e-26
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	6e-26
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	7e-23
d1d7oa_	297	c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (B	1e-20
d1uh5a_	329	c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite	1e-19
d1luaa1	191	c.2.1.7 (A:98-288) Methylene-tetrahydromethanopter	5e-18
d2fr1a1	259	c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI	1e-13
d1jaya_	212	c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase	5e-12
d1t2aa_	347	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H	3e-06
d1rkxa_	356	c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia	1e-04
d1db3a_	357	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric	2e-04
d1kewa_	361	c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {	0.001
d1n7ha_	339	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr	0.001
d1rpna_	321	c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo	0.002

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score =  207 bits (528), Expect = 2e-67
 Identities = 78/252 (30%), Positives = 124/252 (49%), Gaps = 11/252 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
              GK  ++TGGA GIG   A+ FA  GA  + + D++ E G++VA +IG     +   D
Sbjct: 2   LFAGKGVLVTGGARGIGRAIAQAFAREGAL-VALCDLRPE-GKEVAEAIG---GAFFQVD 56

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           + +E +    V+      G++D++ +NA I  ++  + L +    + R+  +N+      
Sbjct: 57  LEDERERVRFVEEAAYALGRVDVLVNNAAI--AAPGSALTVRLPEWRRVLEVNLTAPMHL 114

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
              AAR M + G   +IV  ASV G    +    Y+ SK  ++ L RS ++ L    IRV
Sbjct: 115 SALAAREMRKVGGG-AIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRV 173

Query: 192 NCVSPHGLATPLTCHAYGMPAD--EVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           N V+P  +AT     A  +  D     + +E    L   + +   VA+AVLFLA   + F
Sbjct: 174 NAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASF 232

Query: 250 VTGHDLVVDGGF 261
           +TG  L VDGG 
Sbjct: 233 ITGAILPVDGGM 244

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score =  207 bits (527), Expect = 3e-67
 Identities = 121/253 (47%), Positives = 171/253 (67%), Gaps = 4/253 (1%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVH 69
           N+L+ KVAIITGGA GIGETTA+LF  +GA+ +VIADI D+ G++V  +IG      +VH
Sbjct: 2   NRLQDKVAIITGGAGGIGETTAKLFVRYGAK-VVIADIADDHGQKVCNNIGSPDVISFVH 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT +  V+ LVD+T+  +G+LDIMF N G+LS++  ++L+     F R+  INV G  
Sbjct: 61  CDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAF 120

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGK-RRTDYHMSKHAVIGLVRSASVQLGVHG 188
              KHAARVM+    +GSIV TAS++    G+     Y  +KHAV+GL  S   +LG +G
Sbjct: 121 LVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYG 179

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVNCVSP+ +A+PL    +G+ +  VE+L      L+G +LRA  VADAV +LA  +S+
Sbjct: 180 IRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESK 239

Query: 249 FVTGHDLVVDGGF 261
           +V+G +LV+DGG+
Sbjct: 240 YVSGLNLVIDGGY 252

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  199 bits (507), Expect = 3e-64
 Identities = 77/255 (30%), Positives = 126/255 (49%), Gaps = 10/255 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +  GKV ++TGG  GIG    R F + GAR +VI D  +  GR +   +      ++ C
Sbjct: 2   TRYAGKVVVVTGGGRGIGAGIVRAFVNSGAR-VVICDKDESGGRALEQELP--GAVFILC 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  VK LV  T++ +G+LD + +NAG      Q   +     F +L  +N+ G   
Sbjct: 59  DVTQEDDVKTLVSETIRRFGRLDCVVNNAGH-HPPPQRPEETSAQGFRQLLELNLLGTYT 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             K A   + +    G+++  +S+ G+ G  +   Y  +K AV  + ++ ++    +G+R
Sbjct: 118 LTKLALPYLRKSQ--GNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVR 175

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFE--PQTPLEGVVLRAGHVADAVLFLACRDSE 248
           VNC+SP  + TPL      +  D    + E     PL G + +   V  A +FLA  ++ 
Sbjct: 176 VNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLAS-EAN 233

Query: 249 FVTGHDLVVDGGFLI 263
           F TG +L+V GG  +
Sbjct: 234 FCTGIELLVTGGAEL 248

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score =  195 bits (498), Expect = 7e-63
 Identities = 72/251 (28%), Positives = 109/251 (43%), Gaps = 7/251 (2%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ K+A+ITGGA+GIG   A  FA  GA + +   +          ++G  +   V CD
Sbjct: 2   RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLG-RRVLTVKCD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V+    V+A     +  +G+ DI+ +NAGI         +L F  + + F INV      
Sbjct: 61  VSQPGDVEAFGKQVISTFGRCDILVNNAGI--YPLIPFDELTFEQWKKTFEINVDSGFLM 118

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K     M   G  G I+   S       +  T Y  +K A IG  R+ +  LG  GI V
Sbjct: 119 AKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITV 177

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N ++P  + T  T       +   + L      +   +     +  A  FLA  D+ F+T
Sbjct: 178 NAIAPSLVRTATT--EASALSAMFDVLPNMLQAI-PRLQVPLDLTGAAAFLASDDASFIT 234

Query: 252 GHDLVVDGGFL 262
           G  L VDGG +
Sbjct: 235 GQTLAVDGGMV 245

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score =  194 bits (495), Expect = 2e-62
 Identities = 78/257 (30%), Positives = 135/257 (52%), Gaps = 10/257 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVH 69
           N+L+GKVAIITGG  GIG   A  F + GA+ ++I     ++G + A S+G   +  +  
Sbjct: 2   NRLDGKVAIITGGTLGIGLAIATKFVEEGAK-VMITGRHSDVGEKAAKSVGTPDQIQFFQ 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D ++E     L D+T + +G +  + +NAGI  + +++V +   + + +L A+N+ G+ 
Sbjct: 61  HDSSDEDGWTKLFDATEKAFGPVSTLVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVF 118

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV--QLGVH 187
              +   + M   G+  SI+  +S+ G  G      Y+ SK AV  + +SA++   L  +
Sbjct: 119 FGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDY 178

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            +RVN V P  + TPL      +P  E       +TP+ G +     +A   ++LA  +S
Sbjct: 179 DVRVNTVHPGYIKTPLV---DDLPGAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNES 234

Query: 248 EFVTGHDLVVDGGFLIR 264
           +F TG + VVDGG+  +
Sbjct: 235 KFATGSEFVVDGGYTAQ 251

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  191 bits (487), Expect = 3e-61
 Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 8/254 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N+L+GKVA++TGGASG+G    +L    GA+ +  +DI +  G+Q+A  +G  +  +V  
Sbjct: 2   NRLQGKVALVTGGASGVGLEVVKLLLGEGAK-VAFSDINEAAGQQLAAELG-ERSMFVRH 59

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV++E     ++ +  +  G L+++ +NAGI       +       F RL  IN   +  
Sbjct: 60  DVSSEADWTLVMAAVQRRLGTLNVLVNNAGI--LLPGDMETGRLEDFSRLLKINTESVFI 117

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG-- 188
             +     M E G  GSI+  ASV+     ++   Y  SK AV  L R+A++     G  
Sbjct: 118 GCQQGIAAMKETG--GSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYA 175

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN + P G+ TP+   +      +   L +P+    G       +A  VLFLA  +S 
Sbjct: 176 IRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPERIAQLVLFLASDESS 235

Query: 249 FVTGHDLVVDGGFL 262
            ++G +L  D   L
Sbjct: 236 VMSGSELHADNSIL 249

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score =  189 bits (482), Expect = 3e-60
 Identities = 78/266 (29%), Positives = 123/266 (46%), Gaps = 18/266 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-----GVGKCH 66
           +   KVAIITG ++GIG  TA LFA  GA+ + I     E   +    I          +
Sbjct: 2   RFAEKVAIITGSSNGIGRATAVLFAREGAK-VTITGRHAERLEETRQQILAAGVSEQNVN 60

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGI--LSSSDQTVLDLDFSAFDRLFAIN 124
            V  DVT +     ++ +T+  +G+LDI+ +NAG     S  +T       ++D    +N
Sbjct: 61  SVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLN 120

Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           +R + A  K A   +         + +   +G         Y ++K A+    R+ ++ L
Sbjct: 121 LRSVIALTKKAVPHLSSTKGEIVNISS-IASGLHATPDFPYYSIAKAAIDQYTRNTAIDL 179

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE------PQTPLEGVVLRAGHVADA 238
             HGIRVN +SP  +AT     A GMP +  +K +          P  GV+ +   +A+ 
Sbjct: 180 IQHGIRVNSISPGLVATGFG-SAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIAEV 237

Query: 239 VLFLACRD-SEFVTGHDLVVDGGFLI 263
           + FLA R  S ++ GH LVVDGG  +
Sbjct: 238 IAFLADRKTSSYIIGHQLVVDGGSSL 263

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score =  186 bits (473), Expect = 4e-59
 Identities = 90/251 (35%), Positives = 124/251 (49%), Gaps = 9/251 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           N L GK  IITGGA G+G   AR     GAR +V+AD+ DE G   A  +G     Y H 
Sbjct: 1   NDLSGKTVIITGGARGLGAEAARQAVAAGAR-VVLADVLDEEGAATARELG-DAARYQHL 58

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E   + +V    + +G +D + +NAGI +        ++   F ++  IN+ G+  
Sbjct: 59  DVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVER--FRKVVEINLTGVFI 116

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
            +K     M + G  GSIV  +S AG  G    + Y  SK  V GL + A+V+LG   IR
Sbjct: 117 GMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIR 175

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN V P    TP+T            +   P TP+  V    G +A AV+ L    S +V
Sbjct: 176 VNSVHPGMTYTPMTAET----GIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTSSYV 231

Query: 251 TGHDLVVDGGF 261
           TG +L VDGG+
Sbjct: 232 TGAELAVDGGW 242

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score =  179 bits (456), Expect = 2e-56
 Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 9/254 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHC 70
           LEG  A++TGG+ GIG       A  GA  +       +      T       K     C
Sbjct: 6   LEGCTALVTGGSRGIGYGIVEELASLGAS-VYTCSRNQKELNDCLTQWRSKGFKVEASVC 64

Query: 71  DVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           D+++  + + L+++   ++ G+L+I+ +NAGI     +   D     +  + +IN     
Sbjct: 65  DLSSRSERQELMNTVANHFHGKLNILVNNAGI--VIYKEAKDYTVEDYSLIMSINFEAAY 122

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
                A   +     RG++V  +SV+G+        Y  +K A+  L R  + +     I
Sbjct: 123 HLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNI 181

Query: 190 RVNCVSPHGLATPLTCHAYGMPA-DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           RVN V P  +AT L       P   E       +  L   +     +A  V FL    + 
Sbjct: 182 RVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCFPAAS 240

Query: 249 FVTGHDLVVDGGFL 262
           +VTG  + VDGG +
Sbjct: 241 YVTGQIIYVDGGLM 254

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score =  178 bits (453), Expect = 4e-56
 Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 11/254 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHC 70
           L+ K  ++TGG  GIG      FA  GA  I      +    +  +       +     C
Sbjct: 6   LKAKTVLVTGGTKGIGHAIVEEFAGFGAV-IHTCARNEYELNECLSKWQKKGFQVTGSVC 64

Query: 71  DVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           D +   + + L+ +    + G+LDI+ +N G      +  LD     F    + N+    
Sbjct: 65  DASLRPEREKLMQTVSSMFGGKLDILINNLGA--IRSKPTLDYTAEDFSFHISTNLESAY 122

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A  ++   G   +I+  +S+AG       + Y  +K A+  L R+ + +    GI
Sbjct: 123 HLSQLAHPLLKASGCG-NIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGI 181

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           R N V+P  +ATPL      +  DE +K+   + PL G       V+  V FL    + +
Sbjct: 182 RANAVAPAVIATPLA---EAVYDDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCMPAASY 237

Query: 250 VTGHDLVVDGGFLI 263
           +TG  + VDGG  +
Sbjct: 238 ITGQTICVDGGLTV 251

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  178 bits (453), Expect = 7e-56
 Identities = 75/266 (28%), Positives = 123/266 (46%), Gaps = 18/266 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-----GVGKCH 66
           +   K  IITG ++GIG TTA LFA  GA  + I     E   +    I        + +
Sbjct: 2   RFSNKTVIITGSSNGIGRTTAILFAQEGAN-VTITGRSSERLEETRQIILKSGVSEKQVN 60

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGIL--SSSDQTVLDLDFSAFDRLFAIN 124
            V  DVT E     +++ST++ +G++D++ +NAG     +   T  D     + +   +N
Sbjct: 61  SVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLN 120

Query: 125 VRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQL 184
           ++ +    K     +V       +  ++ VAG         Y ++K A+    RS ++ L
Sbjct: 121 LQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDL 179

Query: 185 GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE------PQTPLEGVVLRAGHVADA 238
              GIRVN VSP  + T  T +A GMP    +K +          P+ G   +  H+A+ 
Sbjct: 180 AKFGIRVNSVSPGMVETGFT-NAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANI 237

Query: 239 VLFLACRD-SEFVTGHDLVVDGGFLI 263
           +LFLA R+ S ++ G  +V DGG  +
Sbjct: 238 ILFLADRNLSFYILGQSIVADGGTSL 263

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (451), Expect = 1e-55
 Identities = 55/259 (21%), Positives = 103/259 (39%), Gaps = 17/259 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCH 66
            +   ++A++TG + GIG   AR     G + +V          ++A         G   
Sbjct: 6   ERWRDRLALVTGASGGIGAAVARALVQQGLK-VVGCARTVGNIEELAAECKSAGYPGTLI 64

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
              CD++NE  + ++  +    +  +DI  +NAG+  +   T+L    S +  +F +NV 
Sbjct: 65  PYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGL--ARPDTLLSGSTSGWKDMFNVNVL 122

Query: 127 GMAACVKHAARVMVE-GGVRGSIVCTASVAGSCG--GKRRTDYHMSKHAVIGLVRSASVQ 183
            ++ C + A + M E     G I+   S++G           Y  +K+AV  L      +
Sbjct: 123 ALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQE 182

Query: 184 L--GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           L      IR  C+SP  + T      +    ++    +E         L+   VA+AV++
Sbjct: 183 LREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQ-----MKCLKPEDVAEAVIY 237

Query: 242 LACRDSEFVTGHDLVVDGG 260
           +    +    G   +   G
Sbjct: 238 VLSTPAHIQIGDIQMRPTG 256

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  176 bits (448), Expect = 2e-55
 Identities = 65/250 (26%), Positives = 111/250 (44%), Gaps = 12/250 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
             G  A++TG   GIG  T +     GA+ +V     +     +A          V  D+
Sbjct: 3   FSGLRALVTGAGKGIGRDTVKALHASGAK-VVAVTRTNSDLVSLAKECP--GIEPVCVDL 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +    +  +       G +D++ +NA +     Q  L++   AFDR F++N+R +    
Sbjct: 60  GDWDATEKALGG----IGPVDLLVNNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVS 113

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  AR M+  GV GSIV  +S+           Y  +K A+  L ++ +++LG H IRVN
Sbjct: 114 QMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVN 173

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+P  + T +       P  E  +  + + PL         V +++LFL    S   +G
Sbjct: 174 SVNPTVVLTDMGKKVSADP--EFARKLKERHPL-RKFAEVEDVVNSILFLLSDRSASTSG 230

Query: 253 HDLVVDGGFL 262
             ++VD G+L
Sbjct: 231 GGILVDAGYL 240

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score =  177 bits (450), Expect = 2e-55
 Identities = 72/263 (27%), Positives = 115/263 (43%), Gaps = 16/263 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           KL+G+  +ITGGASG+G      F   GA+ + + D   E   ++ T  G      +  D
Sbjct: 2   KLKGEAVLITGGASGLGRALVDRFVAEGAK-VAVLDKSAERLAELETDHG-DNVLGIVGD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGIL---SSSDQTVLDLDFSAFDRLFAINVRGM 128
           V +    K      V  +G++D +  NAGI    ++      +   +AFD +F INV+G 
Sbjct: 60  VRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGY 119

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              VK     +V     G+++ T S AG         Y  +KHA++GLVR  + +L    
Sbjct: 120 IHAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELA-PY 176

Query: 189 IRVNCVSPHGLATPLTCHAY------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           +RVN V   G+ + L   +        +    +  + +   P+ G +        A +F 
Sbjct: 177 VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAYVFF 235

Query: 243 ACRD-SEFVTGHDLVVDGGFLIR 264
           A R  +   TG  L  DGG  +R
Sbjct: 236 ATRGDAAPATGALLNYDGGLGVR 258

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score =  176 bits (447), Expect = 3e-55
 Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 11/251 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
            E KVA++TG   GIG   A++ A   +  ++      +    V   I     +      
Sbjct: 8   GENKVALVTGAGRGIGREIAKMLAKSVSH-VICISRTQKSCDSVVDEIKSFGYESSGYAG 66

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DV+ + ++  +++  +  +  +DI+ +NAGI   +    +  D   ++ +   N+  +  
Sbjct: 67  DVSKKEEISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDE--WEDVLRTNLNSLFY 124

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +  ++ M+     G I+  +S+ G  G   + +Y  SK  VIG  +S + +L    I 
Sbjct: 125 ITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNIT 183

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN ++P  +++ +T       +++++K      P  G +     VA+   FL+   S ++
Sbjct: 184 VNAIAPGFISSDMTDK----ISEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDKSGYI 238

Query: 251 TGHDLVVDGGF 261
            G   V+DGG 
Sbjct: 239 NGRVFVIDGGL 249

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  175 bits (446), Expect = 7e-55
 Identities = 68/264 (25%), Positives = 120/264 (45%), Gaps = 16/264 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-----VGKCH 66
           +  GK  IITG ++GIG + A +FA  GA+ + I    ++   +    I        K +
Sbjct: 1   RFSGKSVIITGSSNGIGRSAAVIFAKEGAQ-VTITGRNEDRLEETKQQILKAGVPAEKIN 59

Query: 67  YVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVR 126
            V  DVT       ++++T+  +G++DI+ +NAG   +      D     + + F +N +
Sbjct: 60  AVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQ 119

Query: 127 GMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV 186
            +    +     +++       V +  VAG         Y  +K A+    R  ++ L  
Sbjct: 120 AVIEMTQKTKEHLIKTKGEIVNVSS-IVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQ 178

Query: 187 HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFE------PQTPLEGVVLRAGHVADAVL 240
           HG+RVN VSP  +AT     A G+P    +KL+          P+ G   +   +A+ ++
Sbjct: 179 HGVRVNSVSPGAVATGFM-GAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIV 236

Query: 241 FLACRD-SEFVTGHDLVVDGGFLI 263
           FLA R+ S ++ G  +V DGG  +
Sbjct: 237 FLADRNLSSYIIGQSIVADGGSTL 260

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (445), Expect = 2e-54
 Identities = 58/260 (22%), Positives = 106/260 (40%), Gaps = 13/260 (5%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV------ 62
           A   L+G+VAI+TGGA+GIG+   +   + G+  +VIA  + E  +  A  +        
Sbjct: 6   APGLLQGQVAIVTGGATGIGKAIVKELLELGSN-VVIASRKLERLKSAADELQANLPPTK 64

Query: 63  -GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLF 121
             +   + C++ NE +V  LV ST+  +G+++ + +N G           +    +  + 
Sbjct: 65  QARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGG--QFLSPAEHISSKGWHAVL 122

Query: 122 AINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSAS 181
             N+ G     K      ++      +          G         ++  V  L +S +
Sbjct: 123 ETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKA--GFPLAVHSGAARAGVYNLTKSLA 180

Query: 182 VQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           ++    GIR+NCV+P  + +      YG       +    + P    +     V+  V F
Sbjct: 181 LEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVSSVVCF 239

Query: 242 LACRDSEFVTGHDLVVDGGF 261
           L    + F+TG  + VDGG 
Sbjct: 240 LLSPAASFITGQSVDVDGGR 259

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  173 bits (439), Expect = 3e-54
 Identities = 78/252 (30%), Positives = 120/252 (47%), Gaps = 13/252 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+ K  +ITG A GIG  T  LFA  GAR +V  DI++   R+ A ++G    H V  D
Sbjct: 2   RLKDKAVLITGAAHGIGRATLELFAKEGAR-LVACDIEEGPLREAAEAVG---AHPVVMD 57

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V +   V+      + + G+LD +   AGI  + D     +    ++ +  +N+ G    
Sbjct: 58  VADPASVERGFAEALAHLGRLDGVVHYAGI--TRDNFHWKMPLEDWELVLRVNLTGSFLV 115

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            K A+  M E       +   +     G   + +Y  S   V+GL R+ +++LG  GIRV
Sbjct: 116 AKAASEAMREKN--PGSIVLTASRVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRV 173

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N ++P  + T +T        ++V +     TPL G   +   VA A LFL   +S F+T
Sbjct: 174 NTLAPGFIETRMTAKVP----EKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFIT 228

Query: 252 GHDLVVDGGFLI 263
           G  L VDGG  I
Sbjct: 229 GQVLFVDGGRTI 240

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score =  173 bits (440), Expect = 4e-54
 Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 18/261 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---GKCHYVH 69
              K  I+TGG  GIG    R  A  GA  + +         +V   +G     K     
Sbjct: 7   FVNKTIIVTGGNRGIGLAFTRAVAAAGAN-VAVIYRSAADAVEVTEKVGKEFGVKTKAYQ 65

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV+N   V   +     + G +  + +NAG+  S  +   +L    F  ++ +NV G+ 
Sbjct: 66  CDVSNTDIVTKTIQQIDADLGPISGLIANAGV--SVVKPATELTHEDFAFVYDVNVFGVF 123

Query: 130 ACVKHAARVMVEGGVRGSIV-------CTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
              +  A++ ++   +GSIV          + +   G   +  Y+ SK A   LV+  + 
Sbjct: 124 NTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAA 183

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           +    GIRVN +SP  + T  T H       ++        PL     +   +    + L
Sbjct: 184 EWASAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIPL-NRFAQPEEMTGQAILL 238

Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
               + ++TG +  +DGG LI
Sbjct: 239 LSDHATYMTGGEYFIDGGQLI 259

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  174 bits (443), Expect = 4e-54
 Identities = 53/261 (20%), Positives = 114/261 (43%), Gaps = 28/261 (10%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------G 63
           + +G+V ++TG   G+G   A  FA+ GA  +V+ D+  +       S            
Sbjct: 4   RFDGRVVLVTGAGGGLGRAYALAFAERGAL-VVVNDLGGDFKGVGKGSSAADKVVEEIRR 62

Query: 64  KCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAI 123
           +      +  +    + LV + +  +G++D++ +NAGI    D++   +    +D +  +
Sbjct: 63  RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGI--LRDRSFSRISDEDWDIIQRV 120

Query: 124 NVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
           ++RG     + A   M +    G I+ TAS +G  G   + +Y  +K  ++GL  +  ++
Sbjct: 121 HLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIE 179

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
              + I  N ++P+  +         +  +++ +  +P+           +VA  VL+L 
Sbjct: 180 GRKNNIHCNTIAPNAGSRMTE----TVMPEDLVEALKPE-----------YVAPLVLWL- 223

Query: 244 CRDSEFVTGHDLVVDGGFLIR 264
           C +S    G    V  G++ +
Sbjct: 224 CHESCEENGGLFEVGAGWIGK 244

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  172 bits (437), Expect = 1e-53
 Identities = 68/259 (26%), Positives = 111/259 (42%), Gaps = 16/259 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           L GKVA+ TG   GIG   A      GA ++V      +   +V   +     +   +  
Sbjct: 4   LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQA 63

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D++   +V AL D  V ++G LD + SN+G+        L++    FD++F +N RG   
Sbjct: 64  DISKPSEVVALFDKAVSHFGGLDFVMSNSGM--EVWCDELEVTQELFDKVFNLNTRGQFF 121

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             +   +    GG        A+V    G      Y  SK AV G  R+ +V  G  G+ 
Sbjct: 122 VAQQGLKHCRRGGRIILTSSIAAVMT--GIPNHALYAGSKAAVEGFCRAFAVDCGAKGVT 179

Query: 191 VNCVSPHGLATPLT---------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
           VNC++P G+ T +              GMP +++++      PL   +     +  AV  
Sbjct: 180 VNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGRAVSA 238

Query: 242 LACRDSEFVTGHDLVVDGG 260
           L   +SE++ G  + + GG
Sbjct: 239 LCQEESEWINGQVIKLTGG 257

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score =  169 bits (429), Expect = 1e-52
 Identities = 80/258 (31%), Positives = 123/258 (47%), Gaps = 12/258 (4%)

Query: 6   MCNAKN-KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-- 62
           M N+ N +L+GK AIITG  +GIG+  A  FA  GA  +V++DI  +    V   I    
Sbjct: 1   MFNSDNLRLDGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLG 59

Query: 63  GKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFA 122
           G+     CD+T+E ++ AL D  +   G++DI+ +NAG          D+  + F R + 
Sbjct: 60  GQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGG---GGPKPFDMPMADFRRAYE 116

Query: 123 INVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASV 182
           +NV       +  A  M +    G I+   S+A        T Y  SK A   LVR+ + 
Sbjct: 117 LNVFSFFHLSQLVAPEMEK-NGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAF 175

Query: 183 QLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
            LG   IRVN ++P  + T        +   E+E+     TP+   + +   +A+A LFL
Sbjct: 176 DLGEKNIRVNGIAPGAILTDAL---KSVITPEIEQKMLQHTPI-RRLGQPQDIANAALFL 231

Query: 243 ACRDSEFVTGHDLVVDGG 260
               + +V+G  L V GG
Sbjct: 232 CSPAASWVSGQILTVSGG 249

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score =  169 bits (428), Expect = 2e-52
 Identities = 64/252 (25%), Positives = 115/252 (45%), Gaps = 9/252 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
           L G+VA++TGG+ G+G   A+  A+ G   +V+A    E   + A  +      +     
Sbjct: 3   LRGRVALVTGGSRGLGFGIAQGLAEAGCS-VVVASRNLEEASEAAQKLTEKYGVETMAFR 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV+N  +VK L+++  + +G+LD + + AGI  +      +     F ++  +N+ G  
Sbjct: 62  CDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGI--NRRHPAEEFPLDEFRQVIEVNLFGTY 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
              + A  ++ E      I   +           + Y  SK  V  L ++ + + G +GI
Sbjct: 120 YVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGI 179

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RVN ++P    T +T   +  P  E       + PL G       +    +FLA  ++++
Sbjct: 180 RVNVIAPGWYRTKMTEAVFSDP--EKLDYMLKRIPL-GRTGVPEDLKGVAVFLASEEAKY 236

Query: 250 VTGHDLVVDGGF 261
           VTG  + VDGG+
Sbjct: 237 VTGQIIFVDGGW 248

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  168 bits (426), Expect = 4e-52
 Identities = 60/263 (22%), Positives = 113/263 (42%), Gaps = 26/263 (9%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHYVH 69
            GKVA++TG A GIG   A      GA+ + + D   E G Q   ++       K  ++ 
Sbjct: 2   NGKVALVTGAAQGIGRAFAEALLLKGAK-VALVDWNLEAGVQCKAALHEQFEPQKTLFIQ 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDV ++ Q++      V ++G+LDI+ +NAG+ +  +          +++   IN+  + 
Sbjct: 61  CDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNEKN----------WEKTLQINLVSVI 110

Query: 130 ACVKHAARVMVE--GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSA--SVQLG 185
           +        M +  GG  G I+  +S+AG     ++  Y  SKH ++G  RSA  +  L 
Sbjct: 111 SGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLM 170

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPA----DEVEKLFEPQTPLEGVVLRAGHVADAVLF 241
             G+R+N + P  + T +              E +   +        +L    +A+ ++ 
Sbjct: 171 NSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPPLIANGLIT 229

Query: 242 LACRDSEFVTGHDLVVDGGFLIR 264
           L   + + + G  + +     I 
Sbjct: 230 LI--EDDALNGAIMKITTSKGIH 250

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score =  167 bits (425), Expect = 6e-52
 Identities = 69/253 (27%), Positives = 123/253 (48%), Gaps = 7/253 (2%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           LEGKV +ITG ++G+G++ A  FA   A+++V    +++    V   I    G+   V  
Sbjct: 5   LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKG 64

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT E  V  LV S ++ +G+LD+M +NAG+   +  +  ++  S ++++   N+ G   
Sbjct: 65  DVTVESDVINLVQSAIKEFGKLDVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFL 122

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A +  VE  ++G+++  +SV           Y  SK  +  +  + +++    GIR
Sbjct: 123 GSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIR 182

Query: 191 VNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV 250
           VN + P  + TP+   A      E     E   P+ G +     +A    +LA  ++ +V
Sbjct: 183 VNNIGPGAINTPIN--AEKFADPEQRADVESMIPM-GYIGEPEEIAAVAAWLASSEASYV 239

Query: 251 TGHDLVVDGGFLI 263
           TG  L  DGG  +
Sbjct: 240 TGITLFADGGMTL 252

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score =  169 bits (428), Expect = 6e-52
 Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 8/256 (3%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHY 67
           N  +GKVA ITGG +G+G+    L +  GA+  VIA  + ++ +  A  I      K H 
Sbjct: 21  NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQ-CVIASRKMDVLKATAEQISSQTGNKVHA 79

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           + CDV +   V+  V   ++  G  +I+ +NA    +       L  +A+  +  I + G
Sbjct: 80  IQCDVRDPDMVQNTVSELIKVAGHPNIVINNAA--GNFISPTERLSPNAWKTITDIVLNG 137

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
            A       + +++     + +   ++    G         +K  V  + +S + + G +
Sbjct: 138 TAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKY 197

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           G+R N + P  + T     +   P    EK    + P  G +     +A+   FL    +
Sbjct: 198 GMRFNVIQPGPIKTKG-AFSRLDPTGTFEKEMIGRIPC-GRLGTVEELANLAAFLCSDYA 255

Query: 248 EFVTGHDLVVDGGFLI 263
            ++ G  +  DGG  +
Sbjct: 256 SWINGAVIKFDGGEEV 271

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score =  167 bits (423), Expect = 2e-51
 Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 14/261 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHC 70
           LEGKVA++TG   GIG   A      G ++IV      E   +V  +I         V  
Sbjct: 16  LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKA 75

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           +V     +  + +  V+ +G+LDI+ SN+G+   S   V D+    FDR+F IN RG   
Sbjct: 76  NVGVVEDIVRMFEEAVKIFGKLDIVCSNSGV--VSFGHVKDVTPEEFDRVFTINTRGQFF 133

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIR 190
             + A + +  GG    +      A +    +   Y  SK A+    R  ++ +    I 
Sbjct: 134 VAREAYKHLEIGGRLILMGSITGQAKAVP--KHAVYSGSKGAIETFARCMAIDMADKKIT 191

Query: 191 VNCVSPHGLATPLT--------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL 242
           VN V+P G+ T +          +   +  +EV++    Q      V     +A  V FL
Sbjct: 192 VNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPIDIARVVCFL 251

Query: 243 ACRDSEFVTGHDLVVDGGFLI 263
           A  D  +VTG  + +DGG  +
Sbjct: 252 ASNDGGWVTGKVIGIDGGACM 272

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  166 bits (420), Expect = 2e-51
 Identities = 87/251 (34%), Positives = 134/251 (53%), Gaps = 15/251 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GKVA+++GGA G+G +  R     GA+ +V  DI DE G+ +A  +      YVH D
Sbjct: 3   RLTGKVALVSGGARGMGASHVRAMVAEGAK-VVFGDILDEEGKAMAAELA-DAARYVHLD 60

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT   Q KA VD+ V  +G L ++ +NAGI   +  T+ D   + + R+  +N+ G+   
Sbjct: 61  VTQPAQWKAAVDTAVTAFGGLHVLVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLG 118

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++   + M E G   SI+  +S+ G  G      Y  +K AV GL +S +++LG  GIRV
Sbjct: 119 IRAVVKPMKEAGRG-SIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRV 177

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N + P  + TP+T     +P D        QT L G       V++ V++LA  +S + T
Sbjct: 178 NSIHPGLVKTPMTDW---VPEDIF------QTAL-GRAAEPVEVSNLVVYLASDESSYST 227

Query: 252 GHDLVVDGGFL 262
           G + VVDGG +
Sbjct: 228 GAEFVVDGGTV 238

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (420), Expect = 2e-51
 Identities = 69/250 (27%), Positives = 110/250 (44%), Gaps = 12/250 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           L G+  ++TG   GIG  T +     GAR +V           +           V  D+
Sbjct: 5   LAGRRVLVTGAGKGIGRGTVQALHATGAR-VVAVSRTQADLDSLVRECP--GIEPVCVDL 61

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +    +  + S     G +D++ +NA +  +  Q  L++   AFDR F +N+R +    
Sbjct: 62  GDWEATERALGS----VGPVDLLVNNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQVS 115

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +  AR ++  GV G+IV  +S          + Y  +K A+  L +  +++LG H IRVN
Sbjct: 116 QIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVN 175

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+P  + T +    +  P     K    + PL G      HV +A+LFL    S   TG
Sbjct: 176 AVNPTVVMTSMGQATWSDPHK--AKTMLNRIPL-GKFAEVEHVVNAILFLLSDRSGMTTG 232

Query: 253 HDLVVDGGFL 262
             L V+GGF 
Sbjct: 233 STLPVEGGFW 242

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score =  163 bits (414), Expect = 3e-50
 Identities = 82/256 (32%), Positives = 123/256 (48%), Gaps = 12/256 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L+GK A+ITG A GIG   A  +   GAR + IADI  E  R  A  IG      +  D
Sbjct: 2   RLDGKTALITGSARGIGRAFAEAYVREGAR-VAIADINLEAARATAAEIG-PAACAIALD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           VT++  +   V   +  +G +DI+ +NA +   +     ++   ++DRLFAINV G    
Sbjct: 60  VTDQASIDRCVAELLDRWGSIDILVNNAALFDLAPIV--EITRESYDRLFAINVSGTLFM 117

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           ++  AR M+ GG  G I+  AS AG  G      Y  +K AVI L +SA + L  HGI V
Sbjct: 118 MQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINV 177

Query: 192 NCVSPHGLATPLTCH-------AYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           N ++P  +                 +P  E ++      P  G + RA  +    +FLA 
Sbjct: 178 NAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGMAIFLAT 236

Query: 245 RDSEFVTGHDLVVDGG 260
            +++++      VDGG
Sbjct: 237 PEADYIVAQTYNVDGG 252

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score =  162 bits (412), Expect = 5e-50
 Identities = 50/257 (19%), Positives = 75/257 (29%), Gaps = 21/257 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHC 70
           L  K  I      GIG  T+R       +  VI D  +                  +   
Sbjct: 3   LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTY 62

Query: 71  DVTN-ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           DVT    + K L+         +DI+ + AGIL               +R  AIN  G+ 
Sbjct: 63  DVTVPVAESKKLLKKIFDQLKTVDILINGAGILDDHQ----------IERTIAINFTGLV 112

Query: 130 ACVKHAARVMV--EGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                        +GG  G I    SV G     +   Y  SK AV+    S +    + 
Sbjct: 113 NTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT 172

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           G+    ++P    TPL        +    +    +  L      +       +       
Sbjct: 173 GVTAYSINPGITRTPLVHT---FNSWLDVEPRVAELLLSHPTQTSEQCGQNFVKA---IE 226

Query: 248 EFVTGHDLVVDGGFLIR 264
               G    +D G L  
Sbjct: 227 ANKNGAIWKLDLGTLEA 243

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score =  161 bits (408), Expect = 2e-49
 Identities = 59/254 (23%), Positives = 111/254 (43%), Gaps = 10/254 (3%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHC 70
           L+G  A++TGG+ GIG       A  GAR +      ++   +                C
Sbjct: 4   LKGTTALVTGGSKGIGYAIVEELAGLGAR-VYTCSRNEKELDECLEIWREKGLNVEGSVC 62

Query: 71  DVTNECQVKALVDSTVQNY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           D+ +  +   L+ +    + G+L+I+ +NAG+     +   D     ++ +   N    A
Sbjct: 63  DLLSRTERDKLMQTVAHVFDGKLNILVNNAGV--VIHKEAKDFTEKDYNIIMGTNFE-AA 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +   A  +++    G+++  +S+AG       + Y  SK A+  + +S + +     I
Sbjct: 120 YHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNI 179

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKL--FEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           RVN V+P  + TPL   A      + E++  F  +TP+ G   +   V+  + FL    +
Sbjct: 180 RVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALIAFLCFPAA 238

Query: 248 EFVTGHDLVVDGGF 261
            ++TG  +  DGGF
Sbjct: 239 SYITGQIIWADGGF 252

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score =  161 bits (407), Expect = 4e-49
 Identities = 79/263 (30%), Positives = 115/263 (43%), Gaps = 18/263 (6%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVH 69
           K  GKV ++TG    IG  TA   A+ G   I + D+  E   +   S+     +     
Sbjct: 2   KFNGKVCLVTGAGGNIGLATALRLAEEGTA-IALLDMNREALEKAEASVREKGVEARSYV 60

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
           CDVT+E  V   VDS V+++G++D +F+NAG    +   V D     F R+  INV G  
Sbjct: 61  CDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGY-QGAFAPVQDYPSDDFARVLTINVTGAF 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
             +K  +R M+     G IV TAS+AG  G      Y  SK A+I L  +A++ L  + I
Sbjct: 120 HVLKAVSRQMIT-QNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNI 178

Query: 190 RVNCVSPHGLATPLTCH------------AYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
           RVN +SP  +                    +      V +      P+         +  
Sbjct: 179 RVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIPG 237

Query: 238 AVLFLACRDSEFVTGHDLVVDGG 260
            V FL   DS F+TG +L + GG
Sbjct: 238 VVAFLLGDDSSFMTGVNLPIAGG 260

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  159 bits (404), Expect = 6e-49
 Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 15/254 (5%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
            +L+GKV I+T  A GIG+  A  FA  GA+ ++  DI +   +++    G+        
Sbjct: 2   GRLDGKVIILTAAAQGIGQAAALAFAREGAK-VIATDINESKLQELEKYPGI---QTRVL 57

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           DVT + Q+            +LD++F+ AG       TVLD +   +D    +NVR M  
Sbjct: 58  DVTKKKQIDQ----FANEVERLDVLFNVAGF--VHHGTVLDCEEKDWDFSMNLNVRSMYL 111

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGVHGI 189
            +K     M+     G+I+  +SVA S  G   R  Y  +K AVIGL +S +      GI
Sbjct: 112 MIKAFLPKMLAQ-KSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGI 170

Query: 190 RVNCVSPHGLATPLTCHAYGMPADE--VEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
           R NCV P  + TP          +       F  +    G    A  +A   ++LA  +S
Sbjct: 171 RCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDES 229

Query: 248 EFVTGHDLVVDGGF 261
            +VTG+ +++DGG+
Sbjct: 230 AYVTGNPVIIDGGW 243

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score =  160 bits (405), Expect = 6e-49
 Identities = 75/258 (29%), Positives = 128/258 (49%), Gaps = 12/258 (4%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI----GVGKCHY 67
           +   +V +ITGG SG+G  TA   A  GA+ + + D+  E       ++       +   
Sbjct: 1   RFTDRVVLITGGGSGLGRATAVRLAAEGAK-LSLVDVSSEGLEASKAAVLETAPDAEVLT 59

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
              DV++E QV+A V +T + +G++D  F+NAGI             + FD++ +IN+RG
Sbjct: 60  TVADVSDEAQVEAYVTATTERFGRIDGFFNNAGI-EGKQNPTESFTAAEFDKVVSINLRG 118

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
           +   ++   ++M E    G +V TASV G  G   ++ Y  +KH V+GL R+++V+ G +
Sbjct: 119 VFLGLEKVLKIMRE-QGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRY 177

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADE----VEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           GIR+N ++P  + TP+  ++      E      + F    P       A  +A  V FL 
Sbjct: 178 GIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEIAAVVAFLL 236

Query: 244 CRDSEFVTGHDLVVDGGF 261
             D+ +V    + +DGG 
Sbjct: 237 SDDASYVNATVVPIDGGQ 254

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score =  159 bits (404), Expect = 8e-49
 Identities = 61/257 (23%), Positives = 104/257 (40%), Gaps = 14/257 (5%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDV 72
            +VA++TG  SGIG   AR     G R + +    +E  R     +     +     CDV
Sbjct: 2   SEVALVTGATSGIGLEIARRLGKEGLR-VFVCARGEEGLRTTLKELREAGVEADGRTCDV 60

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +  +++ALV + V+ YG +D++ +NAG          +L    +  +   N+ G+    
Sbjct: 61  RSVPEIEALVAAVVERYGPVDVLVNNAGR--PGGGATAELADELWLDVVETNLTGVFRVT 118

Query: 133 KHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
           K   +           +   +  G   G      Y  SKH V+G  ++  ++L   GI V
Sbjct: 119 KQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV 178

Query: 192 NCVSPHGLATPLT-------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC 244
           N V P  + TP+           + +  +E       + P+ G  ++   VA+ V +L  
Sbjct: 179 NAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLIG 237

Query: 245 RDSEFVTGHDLVVDGGF 261
             +  VT   L V GG 
Sbjct: 238 PGAAAVTAQALNVCGGL 254

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score =  157 bits (398), Expect = 4e-48
 Identities = 70/250 (28%), Positives = 115/250 (46%), Gaps = 13/250 (5%)

Query: 12  KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCD 71
           +L GK  ++TG ASGIG     LFA  GA  +V  D ++ L  +   ++   +   V  D
Sbjct: 2   RLSGKTILVTGAASGIGRAALDLFAREGAS-LVAVDREERLLAEAVAALE-AEAIAVVAD 59

Query: 72  VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAAC 131
           V++   V+A+    ++ +G+L  +   AG+  +      +L   A++++  +N+ G    
Sbjct: 60  VSDPKAVEAVFAEALEEFGRLHGVAHFAGV--AHSALSWNLPLEAWEKVLRVNLTGSFLV 117

Query: 132 VKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRV 191
            + A  V+ EGG        A +           Y   K  V+GL R+ +++L   G+RV
Sbjct: 118 ARKAGEVLEEGGSLVLTGSVAGLGAFG----LAHYAAGKLGVVGLARTLALELARKGVRV 173

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
           N + P  + TP+T            +     +PL G   R   VA A LFL   +S ++T
Sbjct: 174 NVLLPGLIQTPMTAGLP----PWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAYIT 228

Query: 252 GHDLVVDGGF 261
           G  L VDGG 
Sbjct: 229 GQALYVDGGR 238

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score =  155 bits (393), Expect = 3e-47
 Identities = 63/248 (25%), Positives = 122/248 (49%), Gaps = 10/248 (4%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
            EGK+A++TG + GIG   A   A  GA+ ++     +   + ++  +G      +  +V
Sbjct: 2   FEGKIALVTGASRGIGRAIAETLAARGAK-VIGTATSENGAQAISDYLG-ANGKGLMLNV 59

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
           T+   ++++++     +G++DI+ +NAGI  + D  ++ +    ++ +   N+  +    
Sbjct: 60  TDPASIESVLEKIRAEFGEVDILVNNAGI--TRDNLLMRMKDEEWNDIIETNLSSVFRLS 117

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           K   R M++    G I+   SV G+ G   + +Y  +K  +IG  +S + ++   GI VN
Sbjct: 118 KAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVN 176

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
            V+P  + T +T          +      Q P  G +  A  +A+AV FLA  ++ ++TG
Sbjct: 177 VVAPGFIETDMTRALSDDQRAGILA----QVPA-GRLGGAQEIANAVAFLASDEAAYITG 231

Query: 253 HDLVVDGG 260
             L V+GG
Sbjct: 232 ETLHVNGG 239

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score =  155 bits (392), Expect = 4e-47
 Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 13/257 (5%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
           KVA++TG   GIG+  A      G   + IAD  D   + VA+ I    G    V  DV+
Sbjct: 2   KVALVTGAGQGIGKAIALRLVKDGFA-VAIADYNDATAKAVASEINQAGGHAVAVKVDVS 60

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +  QV A V+   +  G  D++ +NAG+  S+      +     D+++ INV+G+   ++
Sbjct: 61  DRDQVFAAVEQARKTLGGFDVIVNNAGVAPSTPI--ESITPEIVDKVYNINVKGVIWGIQ 118

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            A     + G  G I+   S AG  G      Y  SK AV GL ++A+  L   GI VN 
Sbjct: 119 AAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNG 178

Query: 194 VSPHGLATPLTCH-------AYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD 246
             P  + TP+          A G P       F  +  L G +     VA  V +LA  D
Sbjct: 179 YCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD 237

Query: 247 SEFVTGHDLVVDGGFLI 263
           S+++TG  L++DGG + 
Sbjct: 238 SDYMTGQSLLIDGGMVF 254

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score =  154 bits (390), Expect = 1e-46
 Identities = 47/250 (18%), Positives = 88/250 (35%), Gaps = 12/250 (4%)

Query: 18  AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ 77
           AI+T      G  +A   ++ G   +   D   +   ++          Y      +E +
Sbjct: 3   AIVTNVKHFGGMGSALRLSEAGHT-VACHDESFKQKDELEAFAET----YPQLKPMSEQE 57

Query: 78  VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAAR 137
              L+++    YGQ+D++ SN    +   Q +       +            A V   A 
Sbjct: 58  PAELIEAVTSAYGQVDVLVSNDIF-APEFQPIDKYAVEDYRGAVEALQIRPFALVNAVAS 116

Query: 138 VMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPH 197
            M +    G I+   S       K  + Y  ++     L  + S +LG + I V  + P+
Sbjct: 117 QMKK-RKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPN 175

Query: 198 GLATPLTCHAYGMPA----DEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGH 253
            L +  + + Y         E     +  T L   +     + + V FLA    +++TG 
Sbjct: 176 YLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-QRLGTQKELGELVAFLASGSCDYLTGQ 234

Query: 254 DLVVDGGFLI 263
              + GGF +
Sbjct: 235 VFWLAGGFPM 244

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score =  153 bits (388), Expect = 2e-46
 Identities = 68/251 (27%), Positives = 125/251 (49%), Gaps = 11/251 (4%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
            V ++TG + GIG+  A      G +++V      +   +V+  I    G+      DV+
Sbjct: 2   PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS 61

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
            E  V+A++ + +  +G +D++ +NAGI  + D  ++ +  S +D +  +N+ G+  C +
Sbjct: 62  KEADVEAMMKTAIDAWGTIDVVVNNAGI--TRDTLLIRMKKSQWDEVIDLNLTGVFLCTQ 119

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
            A ++M++   +G I+  ASV G  G   + +Y  +K  VIG  ++A+ +     I VN 
Sbjct: 120 AATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNV 178

Query: 194 VSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD-SEFVTG 252
           V P  +A+ +T        +++EK      PL G   +  +VA  V FLA    + ++TG
Sbjct: 179 VCPGFIASDMTAKLG----EDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYITG 233

Query: 253 HDLVVDGGFLI 263
               +DGG  I
Sbjct: 234 QAFTIDGGIAI 244

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  150 bits (380), Expect = 2e-45
 Identities = 53/242 (21%), Positives = 97/242 (40%), Gaps = 19/242 (7%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHC 70
           + G++ +ITG   GIG  TA  FA   ++ +V+ DI      + A        K H    
Sbjct: 5   VTGEIVLITGAGHGIGRLTAYEFAKLKSK-LVLWDINKHGLEETAAKCKGLGAKVHTFVV 63

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           D +N   + +         G + I+ +NAG++ +SD           ++ F +NV     
Sbjct: 64  DCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYTSDLF--ATQDPQIEKTFEVNVLAHFW 121

Query: 131 CVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG---VH 187
             K     M +    G IV  AS AG         Y  SK A +G  ++ + +L    + 
Sbjct: 122 TTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQIT 180

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL------RAGHVADAVLF 241
           G++  C+ P+ + T    +    P+  +    EP+  +  ++       +   +  ++ F
Sbjct: 181 GVKTTCLCPNFVNTGFIKN----PSTSLGPTLEPEEVVNRLMHGILTEQKMIFIPSSIAF 236

Query: 242 LA 243
           L 
Sbjct: 237 LT 238

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score =  149 bits (378), Expect = 7e-45
 Identities = 68/263 (25%), Positives = 113/263 (42%), Gaps = 15/263 (5%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVH 69
           L+GKVA++TG  SGIG   A   A  GA +++          +V   +      K  Y  
Sbjct: 2   LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDG 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D++    V+ LVD+ V+  G++DI+ +NAGI       + D     +D + A+N+  + 
Sbjct: 62  ADLSKGEAVRGLVDNAVRQMGRIDILVNNAGI--QHTALIEDFPTEKWDAILALNLSAVF 119

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
                A   M + G  G I+  AS  G      ++ Y  +KH V+G  +  +++    GI
Sbjct: 120 HGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGI 178

Query: 190 RVNCVSPHGLATPLTCHAYGMPAD--------EVEKLFEPQTPLEGVVLRAGHVADAVLF 241
             N + P  + TPL        A+           +L   + P     +    +    +F
Sbjct: 179 TANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVF 237

Query: 242 LACRDSEFVTGHDLVVDGGFLIR 264
           LA   +  +TG  + VDGG+  R
Sbjct: 238 LASDAAAQITGTTVSVDGGWTAR 260

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  147 bits (373), Expect = 2e-44
 Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 21/249 (8%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           +  K  ++   + GIG   A + +  GA  + I    +EL ++           YV CD+
Sbjct: 2   IRDKGVLVLAASRGIGRAVADVLSQEGAE-VTICARNEELLKRSG-------HRYVVCDL 53

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
             +      +D   +   ++DI+  NAG          +L    F          M   V
Sbjct: 54  RKD------LDLLFEKVKEVDILVLNAGG--PKAGFFDELTNEDFKEAIDSLFLNMIKIV 105

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           ++    M E G  G IV   S +     +     + ++ A+ G +++ S ++  +GI VN
Sbjct: 106 RNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVN 164

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG 252
           CV+P    T        + ++E +K  E Q P+   + +   +A  V FL    + ++TG
Sbjct: 165 CVAPGWTETERV---KELLSEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYLTG 220

Query: 253 HDLVVDGGF 261
             +VVDGG 
Sbjct: 221 QTIVVDGGL 229

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  145 bits (367), Expect = 2e-43
 Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 18/252 (7%)

Query: 9   AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYV 68
           AK     +  ++TGG  GIG   A+  A  G + + +        + +           V
Sbjct: 1   AKPPFVSRSVLVTGGNRGIGLAIAQRLAADGHK-VAVTHRGSGAPKGL---------FGV 50

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DVT+   V     +  ++ G ++++ SNAG+  S+D  ++ +    F+++   N+ G 
Sbjct: 51  EVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGL--SADAFLMRMTEEKFEKVINANLTGA 108

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
               + A+R M      G ++   SV+G  G   + +Y  SK  VIG+ RS + +L    
Sbjct: 109 FRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKAN 167

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           +  N V+P  + T +T            +      P    V     VA  V FLA  D+ 
Sbjct: 168 VTANVVAPGYIDTDMTRALDERIQQGALQ----FIPA-KRVGTPAEVAGVVSFLASEDAS 222

Query: 249 FVTGHDLVVDGG 260
           +++G  + VDGG
Sbjct: 223 YISGAVIPVDGG 234

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

 Score =  144 bits (365), Expect = 5e-43
 Identities = 49/253 (19%), Positives = 91/253 (35%), Gaps = 10/253 (3%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHC 70
           L GK A++ G  +   +G   A    + GA + +    +         +  +G       
Sbjct: 6   LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRA 65

Query: 71  DVTNECQVKALVDSTVQNYGQLDIMFSNA--GILSSSDQTVLDLDFSAFDRLFAINVRGM 128
           DVT + ++ AL     + +G LD +          + +   +D     +     ++   +
Sbjct: 66  DVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSL 125

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
            A  + A  ++ EGG    IV     A      +     ++K A+   VR  + +LG  G
Sbjct: 126 VAVARRAEPLLREGGG---IVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKG 182

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           +RVN +S                  ++        PL    +    V +  LFL    + 
Sbjct: 183 VRVNAISAGP--VRTVAARSIPGFTKMYDRVAQTAPL-RRNITQEEVGNLGLFLLSPLAS 239

Query: 249 FVTGHDLVVDGGF 261
            +TG  + VD G+
Sbjct: 240 GITGEVVYVDAGY 252

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  139 bits (352), Expect = 3e-41
 Identities = 67/251 (26%), Positives = 99/251 (39%), Gaps = 23/251 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
           + A++TGGASG+G   A      G R +V+ D++ E               YV  DVT E
Sbjct: 2   RSALVTGGASGLGRAAALALKARGYR-VVVLDLRRE----------GEDLIYVEGDVTRE 50

Query: 76  CQVKALVDSTV-QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
             V+  V     +      +  +  G+              +F R+  +N+ G    ++ 
Sbjct: 51  EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRL 110

Query: 135 AARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGI 189
           AA  M E      G RG IV TASVA   G   +  Y  SK  V+ L   A+ +L   GI
Sbjct: 111 AAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGWGI 170

Query: 190 RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF 249
           RV  V+P    TPL           +      Q P    + R    A  VL +   ++  
Sbjct: 171 RVVTVAPGLFDTPLLQGLPEKAKASLAA----QVPFPPRLGRPEEYAALVLHIL--ENPM 224

Query: 250 VTGHDLVVDGG 260
           + G  + +DG 
Sbjct: 225 LNGEVVRLDGA 235

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score =  139 bits (351), Expect = 8e-41
 Identities = 65/267 (24%), Positives = 109/267 (40%), Gaps = 26/267 (9%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVT 73
            A+ITGGA  IG + A      G R++V     +   +++   +     G       D++
Sbjct: 3   AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLS 62

Query: 74  NECQ----VKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD---------RL 120
                    + ++D + + +G+ D++ +NA     +     D    A D          L
Sbjct: 63  LSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAEL 122

Query: 121 FAINVRGMAACVKHAARVMVEGGVRGSIVCTA----SVAGSCGGKRRTDYHMSKHAVIGL 176
           F  N       ++  AR   EGG   S   +                  Y M+KHA+ GL
Sbjct: 123 FGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGL 182

Query: 177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA 236
            R+A+++L    IRVN V+P     P           E ++ +  + PL      A  +A
Sbjct: 183 TRAAALELAPRHIRVNAVAPGLSLLP------PAMPQETQEEYRRKVPLGQSEASAAQIA 236

Query: 237 DAVLFLACRDSEFVTGHDLVVDGGFLI 263
           DA+ FL  +D+ ++TG  L VDGG ++
Sbjct: 237 DAIAFLVSKDAGYITGTTLKVDGGLIL 263

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  135 bits (341), Expect = 2e-39
 Identities = 48/261 (18%), Positives = 92/261 (35%), Gaps = 19/261 (7%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFA---DHGARMIVIADIQDELGRQVATSIGV----G 63
           + L   V ++TG + G G   A   A     G+  ++++   + + RQ+   +G      
Sbjct: 2   DGLGCAVCVLTGASRGFGRALAPQLARLLSPGSV-MLVSARSESMLRQLKEELGAQQPDL 60

Query: 64  KCHYVHCDVTNECQVKALVDSTVQN----YGQLDIMFSNAGIL-SSSDQTVLDLDFSAFD 118
           K      D+  E  V+ L+ +  +       Q  ++ +NA  L   S   +   D +  +
Sbjct: 61  KVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVN 120

Query: 119 RLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSKHAVIGLV 177
             +A+N+  M            +       V   S   +    K    Y   K A   L 
Sbjct: 121 NYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLY 180

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD-EVEKLFEPQTPLEGVVLRAGHVA 236
           +  + +     +RV   +P  L   +   A     D E+    +      G ++  G  A
Sbjct: 181 QVLAAEE--PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSA 237

Query: 237 DAVLFLACRDSEFVTGHDLVV 257
             +L L  +D+ F +G  +  
Sbjct: 238 QKLLGLLQKDT-FQSGAHVDF 257

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score =  134 bits (339), Expect = 3e-39
 Identities = 50/255 (19%), Positives = 91/255 (35%), Gaps = 27/255 (10%)

Query: 16  KVAIITGGASGIGETTARLFADHGARM------IVIADIQDELGRQVATSIGV--GKCHY 67
            + +ITG   GIG   A  FA            +V++        +++            
Sbjct: 2   HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDT 61

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +  D+++   V+ L    V+ YG +D + +NAG+       + DL    FD     N++G
Sbjct: 62  ITADISDMADVRRLTTHIVERYGHIDCLVNNAGV--GRFGALSDLTEEDFDYTMNTNLKG 119

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                +    +M      G I    SVA +   +  + Y MSK    GLV +  +     
Sbjct: 120 TFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC 178

Query: 188 GIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS 247
            +R+  V P  + TP+      +  +    +  P+            +A  V+    + S
Sbjct: 179 NVRITDVQPGAVYTPMWGK---VDDEMQALMMMPE-----------DIAAPVVQAYLQPS 224

Query: 248 EFVTGHDLV--VDGG 260
             V    ++    G 
Sbjct: 225 RTVVEEIILRPTSGD 239

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 5e-38
 Identities = 48/245 (19%), Positives = 81/245 (33%), Gaps = 17/245 (6%)

Query: 11  NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHY 67
             L+GK  I+TG + GIG   A   A  GA  +V+     E  ++V +     G    HY
Sbjct: 10  EMLQGKKVIVTGASKGIGREMAYHLAKMGAH-VVVTARSKETLQKVVSHCLELGAASAHY 68

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
           +   + +    +  V    +  G LD++  N    +S +  +   D     +   +N   
Sbjct: 69  IAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLN--LFHDDIHHVRKSMEVNFLS 126

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                  A  ++ +    GSIV  +S+AG         Y  SK A+ G   S   +  V 
Sbjct: 127 YVVLTVAALPMLKQSN--GSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVS 184

Query: 188 G--IRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADA 238
              + +       + T     A          P +E          L    +        
Sbjct: 185 RVNVSITLCVLGLIDTETAMKAVSGIVHMQAAPKEECALEIIKGGALRQEEVYYDSSLWT 244

Query: 239 VLFLA 243
            L + 
Sbjct: 245 TLLIR 249

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score =  131 bits (331), Expect = 6e-38
 Identities = 49/258 (18%), Positives = 92/258 (35%), Gaps = 13/258 (5%)

Query: 12  KLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYV 68
            L GK  ++TG AS   I    A+     GA  +      D+L  +V       G    +
Sbjct: 2   FLSGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIVL 60

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFS---AFDRLFAINV 125
            CDV  +  +  +     + + + D    + G           ++      F     I+ 
Sbjct: 61  QCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISS 120

Query: 126 RGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLG 185
               A  K    ++  G    +++  + +             ++K ++   VR  +  +G
Sbjct: 121 YSFVAMAKACRSMLNPG---SALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMG 177

Query: 186 VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR 245
             G+RVN +S   + T     +      ++    E  TP+    +    V ++  FL   
Sbjct: 178 PEGVRVNAISAGPIRTL--AASGIKDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLCSD 234

Query: 246 DSEFVTGHDLVVDGGFLI 263
            S  ++G  + VDGGF I
Sbjct: 235 LSAGISGEVVHVDGGFSI 252

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (322), Expect = 9e-37
 Identities = 69/254 (27%), Positives = 111/254 (43%), Gaps = 17/254 (6%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           ++G VA+ITGGASG+G  TA      GA   V+ D+ +  G   A  +G   C +   DV
Sbjct: 3   VKGLVAVITGGASGLGLATAERLVGQGAS-AVLLDLPNSGGEAQAKKLG-NNCVFAPADV 60

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSD----QTVLDLDFSAFDRLFAINVRGM 128
           T+E  V+  +      +G++D+  + AGI  +S     +         F R+  +N+ G 
Sbjct: 61  TSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGT 120

Query: 129 AACVKHAARVMVE-----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQ 183
              ++  A  M +     GG RG I+ TASVA   G   +  Y  SK  ++G+    +  
Sbjct: 121 FNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD 180

Query: 184 LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA 243
           L   GIRV  ++P    TPL         ++V      Q P    +      A  V  + 
Sbjct: 181 LAPIGIRVMTIAPGLFGTPLLTSL----PEKVCNFLASQVPFPSRLGDPAEYAHLVQAII 236

Query: 244 CRDSEFVTGHDLVV 257
             ++ F+ G  + +
Sbjct: 237 --ENPFLNGEVIRL 248

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score =  126 bits (317), Expect = 6e-36
 Identities = 36/222 (16%), Positives = 68/222 (30%), Gaps = 20/222 (9%)

Query: 13  LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV 72
           +     ++TG   GIG    +          +IA  +D        SI   + H +   V
Sbjct: 1   MSPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTV 60

Query: 73  TNECQVKALVDSTVQNYGQ--LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
           T +  +   V    +  G   L ++ +NAG+L S   T  + + +       +N   +  
Sbjct: 61  TCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG-TNTEPNRAVIAEQLDVNTTSVVL 119

Query: 131 CVKHAARVMVEGGVRGSIV-----------------CTASVAGSCGGKRRTDYHMSKHAV 173
             +    ++     + S                                   Y MSK A+
Sbjct: 120 LTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAI 179

Query: 174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEV 215
               R+ +V L    + V    P  + T L      +  ++ 
Sbjct: 180 NMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALTVEQS 221

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  116 bits (292), Expect = 2e-32
 Identities = 35/246 (14%), Positives = 71/246 (28%), Gaps = 26/246 (10%)

Query: 14  EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT 73
           E +  ++ GG   +G    + F      +  I  +++E                +    T
Sbjct: 1   EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-------SASVIVKMTDSFT 53

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
            +          +    ++D +   AG   +         F   D ++  ++        
Sbjct: 54  EQADQVTAEVGKLLGDQKVDAILCVAGG-WAGGNAKSKSLFKNCDLMWKQSIWTSTISSH 112

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--HGIRV 191
            A + + E    G +    + A   G      Y M+K AV  L +S + +      G   
Sbjct: 113 LATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA 169

Query: 192 NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT 251
             V P  L TP   +   MP  +       +            + +        +    +
Sbjct: 170 IAVLPVTLDTP--MNRKSMPEADFSSWTPLE-----------FLVETFHDWITGNKRPNS 216

Query: 252 GHDLVV 257
           G  + V
Sbjct: 217 GSLIQV 222

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 3e-32
 Identities = 45/286 (15%), Positives = 79/286 (27%), Gaps = 74/286 (25%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--GKCHYVHCDVT 73
            VA++TGG  GIG    R      +  +V+       G+     +        +   D+ 
Sbjct: 4   HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDID 63

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +   ++AL D   + YG LD++ +NAGI  +             +     N  G      
Sbjct: 64  DLQSIRALRDFLRKEYGGLDVLVNNAGI--AFKVADPTPFHIQAEVTMKTNFFGTRDVCT 121

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS------------------------ 169
               ++      G +V  +S+      K  +                             
Sbjct: 122 ELLPLIKPQ---GRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTK 178

Query: 170 -----------------KHAVIGLVRSASVQLGVH----GIRVNCVSPHGLATPLTCHAY 208
                            K  V  L R  + +L        I +N   P  + T +     
Sbjct: 179 KGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKA 238

Query: 209 GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR--DSEFVTG 252
               +E                     A+  ++LA    D+E   G
Sbjct: 239 TKSPEE--------------------GAETPVYLALLPPDAEGPHG 264

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  114 bits (286), Expect = 4e-31
 Identities = 52/251 (20%), Positives = 85/251 (33%), Gaps = 24/251 (9%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQV-------ATSIGVGKCHYV 68
            V +ITG +SGIG   A   A   ++   +     +L  Q        A +   G    +
Sbjct: 3   TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETL 62

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV +   V A  +   +    + +  +  G+L   +    D   S  D     NV G 
Sbjct: 63  QLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDV----NVVGT 118

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
              ++     M   G  G ++ T SV G  G      Y  SK A+ GL  S +V L   G
Sbjct: 119 VRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFG 177

Query: 189 IRVNCVSPHGLATPLTCHAYGMPAD--------EVEKLFEPQTPLEGVVLRAG----HVA 236
           + ++ +    + T       G P +           + ++     + V   A      VA
Sbjct: 178 VHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVA 237

Query: 237 DAVLFLACRDS 247
           +  L       
Sbjct: 238 EVFLTALRAPK 248

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

 Score =  111 bits (278), Expect = 4e-30
 Identities = 50/255 (19%), Positives = 94/255 (36%), Gaps = 8/255 (3%)

Query: 12  KLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
            L+GK  +I G A+   I    A+   + GA  +    + + L ++V          YV+
Sbjct: 2   FLKGKKGLIVGVANNKSIAYGIAQSCFNQGAT-LAFTYLNESLEKRVRPIAQELNSPYVY 60

Query: 70  -CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             DV+ E   K+L +S  ++ G LD +  +             L+ S      A+ +   
Sbjct: 61  ELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVY 120

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
           +          +       +  +  +  +          ++K A+   VR  +V LG H 
Sbjct: 121 SLIELTNTLKPLLNNGASVLTLS-YLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHH 179

Query: 189 IRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE 248
           IRVN +S   + T     + G+    +   +          +    V +A ++L    S 
Sbjct: 180 IRVNALSAGPIRTL---ASSGIADFRMILKWNEINAPLRKNVSLEEVGNAGMYLLSSLSS 236

Query: 249 FVTGHDLVVDGGFLI 263
            V+G    VD G+ +
Sbjct: 237 GVSGEVHFVDAGYHV 251

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score =  110 bits (275), Expect = 8e-30
 Identities = 52/274 (18%), Positives = 93/274 (33%), Gaps = 55/274 (20%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNE 75
            + +I+G A+GIG  T ++    G + IV  DI+D                 V  D++  
Sbjct: 2   SIIVISGCATGIGAATRKVLEAAGHQ-IVGIDIRDA---------------EVIADLSTA 45

Query: 76  CQVKALV-DSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
              K  + D   +    +D +   AG+   +              + ++N  G    +  
Sbjct: 46  EGRKQAIADVLAKCSKGMDGLVLCAGLGPQTK---------VLGNVVSVNYFGATELMDA 96

Query: 135 AARVMVEGGV--------------------------RGSIVCTASVAGSCGGK-RRTDYH 167
               + +G                             G      ++    G +     Y 
Sbjct: 97  FLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYA 156

Query: 168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEG 227
            SK+A+   VR  +   G  G+R+N ++P    TPL   A        E + +   P+ G
Sbjct: 157 GSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLL-QAGLQDPRYGESIAKFVPPM-G 214

Query: 228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                  +A  + FL    + +V G  +V+DGG 
Sbjct: 215 RRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGI 248

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} Length = 284

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

 Score =  108 bits (270), Expect = 8e-29
 Identities = 61/282 (21%), Positives = 98/282 (34%), Gaps = 43/282 (15%)

Query: 17  VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--------------- 61
           VA++TG A  +G + A      G  + +           ++ ++                
Sbjct: 4   VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLS 63

Query: 62  -----VGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDF-- 114
                          VT   +   LV +   ++G+ D++ +NA     +     D D   
Sbjct: 64  NVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHE 123

Query: 115 ----------SAFDRLFAINVRGMAACVKHAARV-----MVEGGVRGSIVCTASVAGSCG 159
                     +A   LF  N       +K  A           G   SI+       +  
Sbjct: 124 PCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP 183

Query: 160 GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLF 219
               T Y M+K A+ GL RSA+++L    IRVN V P             MP    E   
Sbjct: 184 LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVL-----VDDMPPAVWEG-H 237

Query: 220 EPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
             + PL      A  V+D V+FL    ++++TG  + VDGG+
Sbjct: 238 RSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

 Score =  100 bits (249), Expect = 5e-26
 Identities = 43/261 (16%), Positives = 92/261 (35%), Gaps = 13/261 (4%)

Query: 13  LEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYV 68
           L+GK  +++G    S I    AR+  + GA++++    +  L +++   +          
Sbjct: 4   LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELD 63

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
             +  +   +   V   +    +LD +  + G +  +   +     + +  +        
Sbjct: 64  VQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISA 123

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHG 188
            +    A  ++      GSIV       S          ++K A+  + R  + + G +G
Sbjct: 124 YSYASMAKALLPIMNPGGSIVGMDFD-PSRAMPAYNWMTVAKSALESVNRFVAREAGKYG 182

Query: 189 IRVNCVSPHGLATPLT--------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL 240
           +R N V+   + T               G     +E+ ++ + P+   +  A  VA  V 
Sbjct: 183 VRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPVAKTVC 242

Query: 241 FLACRDSEFVTGHDLVVDGGF 261
            L        TG  +  DGG 
Sbjct: 243 ALLSDWLPATTGDIIYADGGA 263

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 99.6 bits (247), Expect = 6e-26
 Identities = 42/249 (16%), Positives = 74/249 (29%), Gaps = 28/249 (11%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN 74
           GKV I+ GG   +G      F  +G  ++ I    ++         G       + + T 
Sbjct: 3   GKV-IVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG-------NKNWTE 54

Query: 75  ECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKH 134
           + Q      ++     Q+D +F       +             D +   +V   A   K 
Sbjct: 55  QEQSILEQTASSLQGSQVDGVF-CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKL 113

Query: 135 AARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGV--HGIRVN 192
           A   +      G +  T + A          Y M+K AV  L  S + +         V 
Sbjct: 114 ATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL 170

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD-SEFVT 251
            + P  L TP+      MP  +                    +++ +L       S   +
Sbjct: 171 TIMPVTLDTPMNRKW--MPNADHSSWTPLS-----------FISEHLLKWTTETSSRPSS 217

Query: 252 GHDLVVDGG 260
           G  L +   
Sbjct: 218 GALLKITTE 226

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 92.1 bits (227), Expect = 7e-23
 Identities = 42/265 (15%), Positives = 76/265 (28%), Gaps = 39/265 (14%)

Query: 16  KVAIITGGASGIGETTARLFADHGAR--MIVIADIQDELGRQVATSIGVGKC-HYVHCDV 72
              +ITG   G+G    +   +       +       E  +++          H +  D+
Sbjct: 3   NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDL 62

Query: 73  TNECQVKA--LVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAA 130
            N             V     L+++F+NAGI   S +    +           N      
Sbjct: 63  RNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARIT-AVRSQELLDTLQTNTVVPIM 121

Query: 131 CVKHAARVMVEGG----------VRGSIVCTASVAGSCGGKRRTD---YHMSKHAVIGLV 177
             K    ++ +             R +I+  +S+ GS  G        Y  SK A+    
Sbjct: 122 LAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAAT 181

Query: 178 RSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVAD 237
           +S SV L    I    + P  + T +   +  +                      G +  
Sbjct: 182 KSLSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTS----------------TGQIVQ 225

Query: 238 AVLFLACRDSEFVTGHDLVVDGGFL 262
            +  L  +      G  +  DG  L
Sbjct: 226 TISKLGEKQ----NGGFVNYDGTPL 246

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 87.1 bits (214), Expect = 1e-20
 Identities = 49/284 (17%), Positives = 85/284 (29%), Gaps = 39/284 (13%)

Query: 13  LEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH- 69
           L GK A I G A   G G   A+  A  GA ++V   +      + +   G      V  
Sbjct: 6   LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLP 65

Query: 70  --------------------------------CDVTNECQVKALVDSTVQNYGQLDIMFS 97
                                              ++   V+   +   Q++G +DI+  
Sbjct: 66  DGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVH 125

Query: 98  NAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS 157
           +        + +L+     +    + +     + + H   +M  GG   S+   AS    
Sbjct: 126 SLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERII 185

Query: 158 CGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEK 217
                      +K A+    R  + + G            G        A G   D + +
Sbjct: 186 P--GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFI-DTMIE 242

Query: 218 LFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF 261
                 P+    L A  V +A  FL    +  +TG  + VD G 
Sbjct: 243 YSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 329

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 84.6 bits (207), Expect = 1e-19
 Identities = 40/327 (12%), Positives = 83/327 (25%), Gaps = 82/327 (25%)

Query: 15  GKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVAT-------------- 58
             +  I G     G G   A+  +    + I+           +                
Sbjct: 2   EDICFIAGIGDTNGYGWGIAKELSKRNVK-IIFGIWPPVYNIFMKNYKNGKFDNDMIIDK 60

Query: 59  --------------------SIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMFSN 98
                                I     +    ++     ++ + +   Q YG+++++  +
Sbjct: 61  DKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHS 120

Query: 99  AGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC 158
                   + +L+     +    + +   + +  K+   +M        I  T   +   
Sbjct: 121 LANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKP--QSSIISLTYHASQKV 178

Query: 159 GGKRRTDYHMSKHAVIGLVRSASVQLG-VHGIRVNCVSPHGLATPLT------------- 204
                     +K A+    R  +  LG  + IR+N +S   L +                
Sbjct: 179 VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYENN 238

Query: 205 ----------------------------CHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA 236
                                               D   +  E   PL    L +  + 
Sbjct: 239 TNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIG 297

Query: 237 DAVLFLACRDSEFVTGHDLVVDGGFLI 263
               FL  R+S  +TG  + VD G  I
Sbjct: 298 SVASFLLSRESRAITGQTIYVDNGLNI 324

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} Length = 191

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

 Score = 77.6 bits (190), Expect = 5e-18
 Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 14/182 (7%)

Query: 8   NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHY 67
            A   ++GK A++  G   +G  +A L A  GA +++     D+      +     K + 
Sbjct: 16  AAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNV 75

Query: 68  VHCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRG 127
              +  ++      V            +F+   I       +  L  +A+    +I +  
Sbjct: 76  TAAETADDASRAEAV-------KGAHFVFTAGAI------GLELLPQAAWQNESSIEIVA 122

Query: 128 MAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVH 187
                       ++   +G         G+  G       + +  +  L  S+       
Sbjct: 123 DYNAQPPLGIGGIDATDKGKEYGGKRAFGA-LGIGGLKLKLHRACIAKLFESSEGVFDAE 181

Query: 188 GI 189
            I
Sbjct: 182 EI 183

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 67.0 bits (162), Expect = 1e-13
 Identities = 36/238 (15%), Positives = 62/238 (26%), Gaps = 27/238 (11%)

Query: 15  GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDV 72
               ++TGG  G+G   AR  A  GA  +++              +              
Sbjct: 9   TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAA 68

Query: 73  TNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACV 132
            +    +++ +        + +        +  D TV  L     +R     V G     
Sbjct: 69  CDVTDRESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLH 128

Query: 133 KHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVN 192
           +    +        + V  +S A + G      Y      + GL +    Q    G+   
Sbjct: 129 ELTRELD-----LTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQ----QRRSDGLPAT 179

Query: 193 CVSPHGLATPLTCHAYGMPADEVEKLFE-----PQTPLEGV-----VLRAGHVADAVL 240
            V+    A        GM    V   F         P          L    V   V+
Sbjct: 180 AVAWGTWAGS------GMAEGPVADRFRRHGVIEMPPETACRALQNALDRAEVCPIVI 231

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

 Score = 61.2 bits (147), Expect = 5e-12
 Identities = 26/188 (13%), Positives = 52/188 (27%), Gaps = 7/188 (3%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVT 73
           +VA++ GG   +G+  A   A  G   IV+   ++E     A       G          
Sbjct: 2   RVALL-GGTGNLGKGLALRLATLGHE-IVVGSRREEKAEAKAAEYRRIAGDASITGMKNE 59

Query: 74  NECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK 133
           +  +   +   T+     +D       IL         +                 +  +
Sbjct: 60  DAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVSPLVPV--SRGAKGFTYSSERSAAE 117

Query: 134 HAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNC 193
             A V+    V  S + T   A       + D+ +         +   + L      +  
Sbjct: 118 IVAEVLESEKVV-SALHTIPAARFANLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRP 176

Query: 194 VSPHGLAT 201
           +    L+ 
Sbjct: 177 LDAGPLSN 184

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.4 bits (106), Expect = 3e-06
 Identities = 34/243 (13%), Positives = 63/243 (25%), Gaps = 31/243 (12%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-------RQVATSIGVGKCHYV 68
            VA+ITG     G   A    + G  +  I                +   +   G     
Sbjct: 2   NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLH 61

Query: 69  HCDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGM 128
           + D+T+   +  +++             S+  I            F   +    ++  G 
Sbjct: 62  YGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKI-----------SFDLAEYTADVDGVGT 110

Query: 129 AACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR---------RTDYHMSKHAVIGLVRS 179
              +       +   V+     T+ + G               R+ Y  +K     +V +
Sbjct: 111 LRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVN 170

Query: 180 ASVQLGVHGIRV---NCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLR-AGHV 235
                 +  +     N  SP   A  +T       A       E  +       R  GH 
Sbjct: 171 FREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHA 230

Query: 236 ADA 238
            D 
Sbjct: 231 KDY 233

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

 Score = 40.6 bits (93), Expect = 1e-04
 Identities = 9/69 (13%), Positives = 22/69 (31%)

Query: 10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH 69
           +  +GK   +TG     G   +      GA +   +     +     T+          
Sbjct: 3  NSFWQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEI 62

Query: 70 CDVTNECQV 78
           D+ ++ ++
Sbjct: 63 GDIRDQNKL 71

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

 Score = 40.2 bits (93), Expect = 2e-04
 Identities = 25/198 (12%), Positives = 58/198 (29%), Gaps = 26/198 (13%)

Query: 16  KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI------GVGKCHYVH 69
           KVA+ITG     G   A    + G  +  I         +    I         K H  +
Sbjct: 2   KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHY 61

Query: 70  CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMA 129
            D+++   +  ++     +      + + + +  S +      D         ++  G  
Sbjct: 62  GDLSDTSNLTRILREVQPDEVY--NLGAMSHVAVSFESPEYTAD---------VDAMGTL 110

Query: 130 ACVKHAARVMVEGGVRGSIVCTASVAGSCGGKR---------RTDYHMSKHAVIGLVRSA 180
             ++    + +E   R     T+ + G               R+ Y ++K     +  + 
Sbjct: 111 RLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY 170

Query: 181 SVQLGVHGIRVNCVSPHG 198
               G++       +   
Sbjct: 171 RESYGMYACNGILFNHES 188

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

 Score = 37.4 bits (86), Expect = 0.001
 Identities = 37/207 (17%), Positives = 67/207 (32%), Gaps = 38/207 (18%)

Query: 19  IITGGASGIGETTARLFADHGARMIVIADIQDELGR--QVATSIGVGKCHYVHCDVTNEC 76
           +ITGGA  IG    R    +    +V  D     G    ++      + ++ H D+ +  
Sbjct: 4   LITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA 63

Query: 77  QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAA 136
           ++  + +       Q D +   A       ++ +D   +        N+ G  A ++ A 
Sbjct: 64  EITRIFEQ-----YQPDAVMHLAA------ESHVDRSITGPAAFIETNIVGTYALLEVAR 112

Query: 137 RVMVEGG------VRGSIVCTASVAGSCGGKRRTD-------------------YHMSKH 171
           +     G       R   + T  V G        +                   Y  SK 
Sbjct: 113 KYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKA 172

Query: 172 AVIGLVRSASVQLGVHGIRVNCVSPHG 198
           +   LVR+     G+  I  NC + +G
Sbjct: 173 SSDHLVRAWRRTYGLPTIVTNCSNNYG 199

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 37.4 bits (85), Expect = 0.001
 Identities = 10/81 (12%), Positives = 23/81 (28%), Gaps = 7/81 (8%)

Query: 16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELG-------RQVATSIGVGKCHYV 68
          K+A+ITG     G          G  +  +                    ++        
Sbjct: 2  KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLH 61

Query: 69 HCDVTNECQVKALVDSTVQNY 89
          + D+T+   ++  +D    + 
Sbjct: 62 YADLTDASSLRRWIDVIKPDE 82

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 36.5 bits (83), Expect = 0.002
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTN 74
          + A++TG     G   A+L  + G R+  +   +    R     +G+ G   Y   D+ +
Sbjct: 1  RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMAD 60

Query: 75 ECQV 78
           C V
Sbjct: 61 ACSV 64

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	264
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	100.0
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	100.0
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	100.0
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	100.0
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	100.0
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	100.0
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	100.0
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	100.0
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	100.0
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	100.0
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	100.0
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	100.0
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	100.0
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	100.0
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	100.0
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	100.0
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.97
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.86
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.81
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.8
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.78
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.78
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	99.76
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	99.75
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	99.74
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	99.74
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	99.74
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	99.74
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.73
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	99.72
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.72
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	99.7
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	99.7
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	99.7
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	99.69
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.68
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	99.67
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	99.64
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.63
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	99.62
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	99.62
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	99.42
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	99.36
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	99.34
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	99.3
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	99.28
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	99.2
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	99.07
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	98.76
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	98.0
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.98
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	97.93
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	97.84
d1u7za_	223	Coenzyme A biosynthesis bifunctional protein CoaBC	97.82
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	97.79
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	97.69
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	97.68
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.67
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.66
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	97.6
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	97.53
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	97.49
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.46
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	97.46
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	97.42
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	97.4
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.37
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	97.31
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.3
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	97.3
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	97.27
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	97.26
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	97.2
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	97.04
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	96.99
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.96
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	96.93
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	96.86
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	96.85
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	96.81
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	96.81
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	96.79
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	96.76
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	96.74
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	96.71
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	96.67
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	96.66
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	96.64
d2cmda1	145	Malate dehydrogenase {Escherichia coli [TaxId: 562	96.62
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	96.59
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	96.57
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	96.55
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	96.51
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	96.44
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	96.42
d1y7ta1	154	Malate dehydrogenase {Thermus thermophilus [TaxId:	96.41
d1o6za1	142	Malate dehydrogenase {Archaeon Haloarcula marismor	96.4
d1p9oa_	290	Phosphopantothenoylcysteine synthetase {Human (Hom	96.37
d7mdha1	175	Malate dehydrogenase {Sorghum (Sorghum vulgare), c	96.3
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	96.18
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	96.15
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	96.12
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	96.11
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	96.1
d1guza1	142	Malate dehydrogenase {Chlorobium vibrioforme [TaxI	96.09
d1hyea1	145	MJ0490, lactate/malate dehydrogenase {Archaeon Met	96.08
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	96.06
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	96.0
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	95.95
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	95.92
d1uxja1	142	Malate dehydrogenase {Chloroflexus aurantiacus [Ta	95.78
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.66
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	95.63
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.56
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	95.54
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.5
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	95.07
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	94.98
d5mdha1	154	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	94.97
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	94.81
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	94.79
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.7
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	94.62
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	94.5
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	94.47
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	94.46
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	94.4
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	94.3
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	94.23
d2csua3	163	Acetate-CoA ligase alpha chain, AcdA, domains 2 an	93.94
d1u0sy_	118	CheY protein {Thermotoga maritima [TaxId: 2336]}	93.94
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	93.9
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.89
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	93.64
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	93.54
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	93.46
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	93.37
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	93.32
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	93.25
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	93.22
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.07
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	93.0
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	92.91
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	92.83
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	92.68
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	92.6
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	92.49
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	92.44
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	92.15
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	92.03
d2gv8a2	107	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	92.01
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	91.87
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.63
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	91.41
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	91.41
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	91.4
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	91.31
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	91.28
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	91.2
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	91.16
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	91.16
d1byia_	224	Dethiobiotin synthetase {Escherichia coli [TaxId:	90.98
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	90.86
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	90.83
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	90.74
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	90.7
d1a9xa3	127	Carbamoyl phosphate synthetase (CPS), large subuni	90.65
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	90.59
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	90.47
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	90.43
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	90.35
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	90.19
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	89.88
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	89.76
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	89.65
d2cvza2	156	Hydroxyisobutyrate dehydrogenase {Thermus thermoph	89.59
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	89.3
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	89.16
d1yovb1	426	UBA3 {Human (Homo sapiens) [TaxId: 9606]}	88.69
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	88.65
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	88.58
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	88.51
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	88.35
d1g3qa_	237	Cell division regulator MinD {Archaeon Pyrococcus	88.23
d1wy7a1	201	Hypothetical protein PH1948 {Archaeon Pyrococcus h	88.21
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	87.77
d1f0ka_	351	Peptidoglycan biosynthesis glycosyltransferase Mur	87.74
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	87.55
d1aoga2	117	Trypanothione reductase {Trypanosoma cruzi [TaxId:	87.21
d1ihua2	279	Arsenite-translocating ATPase ArsA {Escherichia co	86.91
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	86.88
d2fr1a2	209	Erythromycin synthase, eryAI, 1st ketoreductase mo	86.8
d1diha1	162	Dihydrodipicolinate reductase {Escherichia coli [T	86.48
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	86.37
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	86.06
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	85.68
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	85.5
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	85.17
d1w4xa2	235	Phenylacetone monooxygenase {Thermobifida fusca [T	84.63
d1hyqa_	232	Cell division regulator MinD {Archaeon Archaeoglob	84.46
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	84.22
d2esra1	152	Putative methyltransferase SPy1538 {Streptococcus	84.16
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	84.16
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	84.02
d1a9xa4	121	Carbamoyl phosphate synthetase (CPS), large subuni	83.98
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	83.73
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	83.63
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	83.59
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	83.44
d1gtma1	239	Glutamate dehydrogenase {Archaeon Pyrococcus furio	83.31
d1u8xx1	167	Maltose-6'-phosphate glucosidase GlvA {Bacillus su	82.89
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	82.78
d2o14a2	208	Hypothetical protein YxiM {Bacillus subtilis [TaxI	82.74
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	82.57
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	82.56
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	82.49
d1qkia1	203	Glucose 6-phosphate dehydrogenase, N-terminal doma	82.22
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	81.08
d1cp2a_	269	Nitrogenase iron protein {Clostridium pasteurianum	80.88
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	80.77

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=3.8e-59  Score=383.14  Aligned_cols=248  Identities=27%  Similarity=0.470  Sum_probs=224.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .||+||++|||||++|||+++|++|+++|++|++++|+.++..+.+.+++.  ..++.++++|++|+++++++++++.++
T Consensus         3 ~dL~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (261)
T d1geea_           3 KDLEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKE   82 (261)
T ss_dssp             GGGTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999999987766665555543  247899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      +|+||+||||||+..+.  ++.+.+.++|++++++|+.++++++|.++|+|++++..++||++||..+..+.+....|++
T Consensus        83 ~G~iDiLVnnAG~~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~a  160 (261)
T d1geea_          83 FGKLDVMINNAGLENPV--SSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAA  160 (261)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHH
T ss_pred             hCCCCEeeccceecCCc--chhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCcccccccc
Confidence            99999999999987665  8999999999999999999999999999999988773456999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|+|......  .++..+.+....|. +|+.+|||||++++||+|++++
T Consensus       161 sKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~S~~s~  237 (261)
T d1geea_         161 SKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFA--DPEQRADVESMIPM-GYIGEPEEIAAVAAWLASSEAS  237 (261)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHH--SHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGT
T ss_pred             CCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcC--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchhc
Confidence            99999999999999999999999999999999999865432  23445556677888 8999999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      ++|||+|.+|||++|
T Consensus       238 ~itG~~i~vDGG~sl  252 (261)
T d1geea_         238 YVTGITLFADGGMTL  252 (261)
T ss_dssp             TCCSCEEEESTTGGG
T ss_pred             CCcCCeEEECCCeeC
Confidence            999999999999987

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.6e-59  Score=378.94  Aligned_cols=242  Identities=27%  Similarity=0.489  Sum_probs=220.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      ||+||++|||||++|||+++|++|+++|++|+++.|+.+++ +++.+++. .+...+++|++|+++++++++++.+++|+
T Consensus         1 dl~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l-~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   78 (243)
T d1q7ba_           1 NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGA-QAISDYLG-ANGKGLMLNVTDPASIESVLEKIRAEFGE   78 (243)
T ss_dssp             CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHH-HHHHHHhC-CCCcEEEEEecCHHHhhhhhhhhhcccCC
Confidence            68999999999999999999999999999988888776555 44444443 36788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||.....  ++.+.+.++|++.+++|+.++++++|+++|+|++++ .|+||++||..+..+.++...|++||+
T Consensus        79 iDilVnnAg~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKa  155 (243)
T d1q7ba_          79 VDILVNNAGITRDN--LLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKR-HGRIITIGSVVGTMGNGGQANYAAAKA  155 (243)
T ss_dssp             CSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCTTCHHHHHHHH
T ss_pred             cceehhhhhhcccc--ccccccccccccccceeechhhhhHHHHHHHHHHcC-CCEeeeecchhhcCCCCCCHHHHHHHH
Confidence            99999999987665  899999999999999999999999999999999887 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      |+++|+|++|.|++++|||||+|+||+++|+|....    .++..+.+....|. +|+.+|||||++++||+|++++++|
T Consensus       156 al~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~----~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~it  230 (243)
T d1q7ba_         156 GLIGFSKSLAREVASRGITVNVVAPGFIETDMTRAL----SDDQRAGILAQVPA-GRLGGAQEIANAVAFLASDEAAYIT  230 (243)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTS----CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHhCccCeEEEEEecceEechhhhhh----hhhHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchhcCCc
Confidence            999999999999999999999999999999998654    23445556667888 8999999999999999999999999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      ||+|.+|||++|
T Consensus       231 Gq~i~vdGG~~~  242 (243)
T d1q7ba_         231 GETLHVNGGMYM  242 (243)
T ss_dssp             SCEEEESTTSSC
T ss_pred             CCeEEECCCeEe
Confidence            999999999876

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=5e-59  Score=380.49  Aligned_cols=247  Identities=26%  Similarity=0.398  Sum_probs=220.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |+|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+...  ..++.++++|++|+++++++++++.++
T Consensus         1 f~l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   80 (251)
T d1vl8a_           1 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEK   80 (251)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence            589999999999999999999999999999998888887766555444332  347889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~  167 (264)
                      +|+||+||||||+....  ++.+.+.++|++.+++|+.++++++|.++|+|++++ .|+||+++|..+. .+.++...|+
T Consensus        81 ~g~iDiLVnnAG~~~~~--~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~i~S~~~~~~~~~~~~~Y~  157 (251)
T d1vl8a_          81 FGKLDTVVNAAGINRRH--PAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESD-NPSIINIGSLTVEEVTMPNISAYA  157 (251)
T ss_dssp             HSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCS-SCEEEEECCGGGTCCCSSSCHHHH
T ss_pred             cCCCCEEEECCCCCCCC--ChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccc-cccccccccchhccccCccccchH
Confidence            99999999999987654  899999999999999999999999999999999887 8999999998764 4677889999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      ++|+|+++|+|+++.|++++|||||+|+||+++|+|......  .++..+.+....|. +|+.+|||||++++||+|+++
T Consensus       158 asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~a  234 (251)
T d1vl8a_         158 ASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFS--DPEKLDYMLKRIPL-GRTGVPEDLKGVAVFLASEEA  234 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHT--CHHHHHHHHHTCTT-SSCBCGGGGHHHHHHHHSGGG
T ss_pred             HHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccC--CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCchh
Confidence            999999999999999999999999999999999999876543  23444555667888 899999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      +|+|||+|.+|||++-
T Consensus       235 ~~itG~~i~vDGG~ta  250 (251)
T d1vl8a_         235 KYVTGQIIFVDGGWTA  250 (251)
T ss_dssp             TTCCSCEEEESTTGGG
T ss_pred             CCCcCcEEEeCcCeeC
Confidence            9999999999999974

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=5.9e-59  Score=382.56  Aligned_cols=248  Identities=27%  Similarity=0.426  Sum_probs=213.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      |+||++|||||++|||+++|++|+++|++|++++|++.+..+.+.+.+   ...++.++++|++|+++++++++++.++|
T Consensus         2 L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~   81 (260)
T d1x1ta1           2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM   81 (260)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred             CCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh
Confidence            689999999999999999999999999999888988765555444433   23578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      |++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||+++|..+..+.+++..|++|
T Consensus        82 G~iDiLVnnAG~~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~as  158 (260)
T d1x1ta1          82 GRIDILVNNAGIQHTA--LIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQG-FGRIINIASAHGLVASANKSAYVAA  158 (260)
T ss_dssp             SCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHH
T ss_pred             CCCcEEEeecccccCC--chhhhhHHhhhhhhhccccccccccchhhhhHhhcC-CceEeecccccceeccCCcchhhhh
Confidence            9999999999987665  899999999999999999999999999999999987 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--------hHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--------ADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|........        .+...+.+....|. +|+.+|||||++++|
T Consensus       159 Kaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pediA~~v~f  237 (260)
T d1x1ta1         159 KHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS-LQFVTPEQLGGTAVF  237 (260)
T ss_dssp             HHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT-CCCBCHHHHHHHHHH
T ss_pred             hhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            999999999999999999999999999999999986543211        11112223445677 899999999999999


Q ss_pred             HhCCCCCCeeccEEEecCeeecC
Q 041914          242 LACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |||++++|+|||+|.+|||++-|
T Consensus       238 L~S~~a~~itG~~i~vDGG~tar  260 (260)
T d1x1ta1         238 LASDAAAQITGTTVSVDGGWTAR  260 (260)
T ss_dssp             HHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HhChhhCCCcCCEEEECcchhcC
Confidence            99999999999999999999865

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=2.6e-58  Score=375.58  Aligned_cols=245  Identities=29%  Similarity=0.397  Sum_probs=208.6

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|+.|+++|++|+++.|++.+..+...+.. ..++.++++|++|+++++++++++.+++|+
T Consensus         2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~-g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~   80 (247)
T d2ew8a1           2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNL-GRRVLTVKCDVSQPGDVEAFGKQVISTFGR   80 (247)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHT-TCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHc-CCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            5899999999999999999999999999999988887765544433333 347899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.+....|++||+
T Consensus        81 iDilVnnAG~~~~~--~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~asKa  157 (247)
T d2ew8a1          81 CDILVNNAGIYPLI--PFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNG-WGRIINLTSTTYWLKIEAYTHYISTKA  157 (247)
T ss_dssp             CCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGGSCCSSCHHHHHHHH
T ss_pred             CCEEEECCCCCCCC--ChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcC-CCCccccccchhcccCcccccchhhhc
Confidence            99999999997654  899999999999999999999999999999999987 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      |+.+|+|++|.|++++|||||+|+||+++|+|.......  +..........|. +|+.+|||||++++||+|++++|+|
T Consensus       158 al~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~l-~r~~~pedvA~~v~fL~S~~s~~it  234 (247)
T d2ew8a1         158 ANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--AMFDVLPNMLQAI-PRLQVPLDLTGAAAFLASDDASFIT  234 (247)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECCC--------------------CTTSSS-CSCCCTHHHHHHHHHHTSGGGTTCC
T ss_pred             cHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccc--hhHHHHHHHhccC-CCCCCHHHHHHHHHHHhCchhcCCc
Confidence            999999999999999999999999999999998654321  1111112223466 7999999999999999999999999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      ||+|.+|||++.
T Consensus       235 G~~i~vDGG~~~  246 (247)
T d2ew8a1         235 GQTLAVDGGMVR  246 (247)
T ss_dssp             SCEEEESSSCCC
T ss_pred             CCeEEECCCEec
Confidence            999999999864

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.1e-58  Score=380.19  Aligned_cols=249  Identities=27%  Similarity=0.420  Sum_probs=194.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..|+|+||++|||||++|||+++|++|+++|++|++++|+.+++.+...+... ..++.++.+|++++++++++++++.+
T Consensus         2 ~~F~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   81 (259)
T d1xq1a_           2 QRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSS   81 (259)
T ss_dssp             CTTCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CccCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHH
Confidence            46789999999999999999999999999999988888877766555444433 35799999999999999999999999


Q ss_pred             hc-CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           88 NY-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        88 ~~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++ |++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.++...|
T Consensus        82 ~~~g~idilvnnAG~~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y  158 (259)
T d1xq1a_          82 MFGGKLDILINNLGAIRSK--PTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASG-CGNIIFMSSIAGVVSASVGSIY  158 (259)
T ss_dssp             HHTTCCSEEEEECCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-SCEEEEEC----------CCHH
T ss_pred             HhCCCcccccccccccCCC--chhhCCHHHHHHHHHHHhhhheeeehhhhhcccccc-cccccccccccccccccccccc
Confidence            98 7899999999988765  899999999999999999999999999999999887 8999999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++|+|+.+|+|++|.|++++|||||+|+||+++|+|.....   .++..+.+....|. +|+.+|||||++++||+|++
T Consensus       159 ~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~---~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~  234 (259)
T d1xq1a_         159 SATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY---DDEFKKVVISRKPL-GRFGEPEEVSSLVAFLCMPA  234 (259)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-----------------------------CCGGGGHHHHHHHTSGG
T ss_pred             cccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhc---hHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCch
Confidence            999999999999999999999999999999999999986543   23444555667788 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ++|+|||+|.+|||++++
T Consensus       235 s~~iTG~~i~vDGG~s~~  252 (259)
T d1xq1a_         235 ASYITGQTICVDGGLTVN  252 (259)
T ss_dssp             GTTCCSCEEECCCCEEET
T ss_pred             hcCCcCcEEEeCCCEECC
Confidence            999999999999999874

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=5.2e-58  Score=374.63  Aligned_cols=247  Identities=29%  Similarity=0.448  Sum_probs=220.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+...+..++....+++.++++|++|+++++++++++.+++|+
T Consensus         3 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   82 (251)
T d1zk4a1           3 RLDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGP   82 (251)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            59999999999999999999999999999988888876655444333333468999999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      ||+||||||.....  ++.+.+.++|++++++|+.++++++|.++|+|++++..++||++||..+..+.|....|++||+
T Consensus        83 iDiLVnnAg~~~~~--~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKa  160 (251)
T d1zk4a1          83 VSTLVNNAGIAVNK--SVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKG  160 (251)
T ss_dssp             CCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             ceEEEecccccccc--chhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHH
Confidence            99999999998665  8999999999999999999999999999999998773459999999999999999999999999


Q ss_pred             HHHHHHHHHHHH--hCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          172 AVIGLVRSASVQ--LGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       172 al~~~~~~la~e--~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+.+|+|++|.|  ++++|||||+|+||+++|+|.....   .++.........|. +|+.+|||||++++||+|++++|
T Consensus       161 al~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~---~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  236 (251)
T d1zk4a1         161 AVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLP---GAEEAMSQRTKTPM-GHIGEPNDIAYICVYLASNESKF  236 (251)
T ss_dssp             HHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTST---THHHHHTSTTTCTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcC---CHHHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCchhCC
Confidence            999999999998  5789999999999999999986542   23444455566788 89999999999999999999999


Q ss_pred             eeccEEEecCeeecC
Q 041914          250 VTGHDLVVDGGFLIR  264 (264)
Q Consensus       250 ~~G~~i~~dgG~~~~  264 (264)
                      +|||+|.+|||++-|
T Consensus       237 itG~~i~vDGG~ta~  251 (251)
T d1zk4a1         237 ATGSEFVVDGGYTAQ  251 (251)
T ss_dssp             CCSCEEEESTTGGGC
T ss_pred             CcCcEEEECcccccC
Confidence            999999999999754

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=2.4e-58  Score=378.32  Aligned_cols=250  Identities=26%  Similarity=0.347  Sum_probs=224.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +++|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+... ..++.++++|++|+++++++++++.++
T Consensus         3 ~f~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~   82 (259)
T d2ae2a_           3 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANH   82 (259)
T ss_dssp             TTCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999999999999999988888877766555444433 247889999999999999999999999


Q ss_pred             cC-CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 YG-QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~~-~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++ ++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||+++|..+..+.++...|+
T Consensus        83 ~~~~idilvnnAG~~~~~--~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~  159 (259)
T d2ae2a_          83 FHGKLNILVNNAGIVIYK--EAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASE-RGNVVFISSVSGALAVPYEAVYG  159 (259)
T ss_dssp             TTTCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTS-SEEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCCceEEEECCceeccC--ccccCCHHHHHHHHhcccceeEEEEeeccchhhhhc-ccccccccccccccccccccchH
Confidence            86 799999999987655  899999999999999999999999999999999987 89999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|+|+++|+|++|.|++++|||||+|+||+++|+|........ .++..+.+....|. +|+.+|||||++++||+|++
T Consensus       160 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~  238 (259)
T d2ae2a_         160 ATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCAL-RRMGEPKELAAMVAFLCFPA  238 (259)
T ss_dssp             HHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999999999987654322 23334455567888 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ++|+|||+|.+|||++.
T Consensus       239 s~~itG~~i~VDGG~~a  255 (259)
T d2ae2a_         239 ASYVTGQIIYVDGGLMA  255 (259)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCcEEEECCCeEe
Confidence            99999999999999975

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=2.7e-58  Score=377.02  Aligned_cols=247  Identities=31%  Similarity=0.438  Sum_probs=221.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+... .+++.++++|++|+++++++++++.+
T Consensus         5 d~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~   84 (255)
T d1fmca_           5 DNLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAIS   84 (255)
T ss_dssp             GGGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            45679999999999999999999999999999998888876665444433332 25789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++|++|+||||||+....  ++ +.+.++|++++++|+.++++++|.++|+|++++ .++||++||..+..+.++...|+
T Consensus        85 ~~g~iDilvnnAG~~~~~--~~-e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Ii~isS~~~~~~~~~~~~Y~  160 (255)
T d1fmca_          85 KLGKVDILVNNAGGGGPK--PF-DMPMADFRRAYELNVFSFFHLSQLVAPEMEKNG-GGVILTITSMAAENKNINMTSYA  160 (255)
T ss_dssp             HHSSCCEEEECCCCCCCC--CT-TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTCCCTTCHHHH
T ss_pred             HcCCCCEeeeCCcCCCCC--cc-cCCHHHHHHHHHHHHHHhhhhHHHHHhhhcccc-ccccccccccchhccccccccch
Confidence            999999999999987653  44 789999999999999999999999999999988 88999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+.+|+|++|.|++++|||||+|+||+++|++.....   .++..+.+....|. +|+.+|||||++++||+|+++
T Consensus       161 asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~---~~e~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~s  236 (255)
T d1fmca_         161 SSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI---TPEIEQKMLQHTPI-RRLGQPQDIANAALFLCSPAA  236 (255)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTC---CHHHHHHHHHTCSS-CSCBCHHHHHHHHHHHHSGGG
T ss_pred             hHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccC---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            99999999999999999999999999999999999986543   24455556667888 899999999999999999999


Q ss_pred             CCeeccEEEecCeeec
Q 041914          248 EFVTGHDLVVDGGFLI  263 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~~  263 (264)
                      +|+|||+|.+|||+..
T Consensus       237 ~~itG~~i~vDGG~~~  252 (255)
T d1fmca_         237 SWVSGQILTVSGGGVQ  252 (255)
T ss_dssp             TTCCSCEEEESTTSCC
T ss_pred             cCCcCCEEEECcCccc
Confidence            9999999999999853

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=2.5e-58  Score=377.82  Aligned_cols=249  Identities=30%  Similarity=0.487  Sum_probs=222.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      +|+||++|||||++|||+++|++|+++|++|+++.|+.++..+...+..   ...++.++++|++|+++++++++++.++
T Consensus         1 rl~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~   80 (258)
T d1iy8a_           1 RFTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER   80 (258)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHH
Confidence            5899999999999999999999999999998888888766544433332   2357899999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ||+||+||||||+.... .++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.+....|++
T Consensus        81 ~G~iDiLVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~a  158 (258)
T d1iy8a_          81 FGRIDGFFNNAGIEGKQ-NPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQG-SGMVVNTASVGGIRGIGNQSGYAA  158 (258)
T ss_dssp             HSCCSEEEECCCCCCCC-BCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCGGGTSBCSSBHHHHH
T ss_pred             hCCCCEEEECCcccccC-CchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhc-CCCCcccccHhhccCCCCchHHHH
Confidence            99999999999986543 3788999999999999999999999999999999887 899999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc----CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY----GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      ||+|+.+|+|++|.|++++|||||+|+||+++|+|.....    ....++..+.+....|. +|+.+|||+|++++||+|
T Consensus       159 sKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~p~dvA~~v~fL~S  237 (258)
T d1iy8a_         159 AKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS-KRYGEAPEIAAVVAFLLS  237 (258)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999876442    22345555666777888 899999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++++++|||+|.+|||++-
T Consensus       238 ~~s~~itG~~i~VDGG~sa  256 (258)
T d1iy8a_         238 DDASYVNATVVPIDGGQSA  256 (258)
T ss_dssp             GGGTTCCSCEEEESTTTTT
T ss_pred             chhcCCcCceEEcCcchhc
Confidence            9999999999999999863

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=2.9e-58  Score=376.16  Aligned_cols=246  Identities=23%  Similarity=0.383  Sum_probs=219.5

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..+.|++|++|||||++|||+++|++|+++|++|+++.|+.++..+...+.... .++.++++|++|+++++++++++.+
T Consensus         4 ~~f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   83 (251)
T d2c07a1           4 YYYCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILT   83 (251)
T ss_dssp             CCCCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             cccCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHH
Confidence            457799999999999999999999999999999888888766654444333332 4789999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++|++|+||||||.....  ++.+.+.++|++++++|+.++++++|+++|+|++++ .|+||++||..+..+.++...|+
T Consensus        84 ~~g~iDilvnnag~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~  160 (251)
T d2c07a1          84 EHKNVDILVNNAGITRDN--LFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNR-YGRIINISSIVGLTGNVGQANYS  160 (251)
T ss_dssp             HCSCCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHH
T ss_pred             hcCCceeeeecccccccc--ccccccHHHHhhhheeeehhhhhhhhhcCcccccCC-CeEEEEECCHHhcCCCCCCHHHH
Confidence            999999999999987665  888999999999999999999999999999999987 89999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+++|+|++|.|++++|||||+|+||+++|+|....    .++..+.+....|. +|+.+|||||++++||+|+++
T Consensus       161 asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~----~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s  235 (251)
T d2c07a1         161 SSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKI----SEQIKKNIISNIPA-GRMGTPEEVANLACFLSSDKS  235 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----C----CHHHHHHHHTTCTT-SSCBCHHHHHHHHHHHHSGGG
T ss_pred             HHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEeccccccc----CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchh
Confidence            9999999999999999999999999999999999997654    35556667777888 899999999999999999999


Q ss_pred             CCeeccEEEecCeee
Q 041914          248 EFVTGHDLVVDGGFL  262 (264)
Q Consensus       248 ~~~~G~~i~~dgG~~  262 (264)
                      +++|||+|.+|||++
T Consensus       236 ~~itG~~i~vDGG~s  250 (251)
T d2c07a1         236 GYINGRVFVIDGGLS  250 (251)
T ss_dssp             TTCCSCEEEESTTSC
T ss_pred             CCCcCcEEEECCCcC
Confidence            999999999999975

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=3e-58  Score=377.28  Aligned_cols=249  Identities=31%  Similarity=0.488  Sum_probs=220.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++|+||++|||||++|||+++|+.|+++|++|++++|+.++..+. .+++. .++.++++|++|+++++++++++.+++|
T Consensus         1 M~L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~-~~~~~-~~~~~~~~Dvt~~~~v~~~~~~~~~~~g   78 (256)
T d1k2wa_           1 MRLDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARAT-AAEIG-PAACAIALDVTDQASIDRCVAELLDRWG   78 (256)
T ss_dssp             CTTTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHH-HHHHC-TTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHhC-CceEEEEeeCCCHHHHHHHHHHHHHHhC
Confidence            358999999999999999999999999999988888876655444 34443 4788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      +||+||||||+....  ++.+.+.++|++.+++|+.++++++|.++|.|.+++..|+||++||..+..+.+....|++||
T Consensus        79 ~iDilVnnAg~~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asK  156 (256)
T d1k2wa_          79 SIDILVNNAALFDLA--PIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATK  156 (256)
T ss_dssp             CCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CccEEEeeccccccc--ccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhh
Confidence            999999999987654  899999999999999999999999999999876654379999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|.....       ....++..+.+....|. +|+.+|||||++++||+
T Consensus       157 aal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~p~evA~~v~fL~  235 (256)
T d1k2wa_         157 AAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPF-GRMGRAEDLTGMAIFLA  235 (256)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTT-SSCBCHHHHHHHHHHTT
T ss_pred             hHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999865432       12233444555566788 89999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeecC
Q 041914          244 CRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |++++|+|||+|.+|||.+|+
T Consensus       236 S~~a~~iTG~~i~vDGG~~ms  256 (256)
T d1k2wa_         236 TPEADYIVAQTYNVDGGNWMS  256 (256)
T ss_dssp             SGGGTTCCSCEEEESTTSSCC
T ss_pred             CchhCCccCceEEECcchhhC
Confidence            999999999999999999885

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=2e-57  Score=375.05  Aligned_cols=251  Identities=44%  Similarity=0.694  Sum_probs=220.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+....+.+.+++||++|+++++++++++.+++|+
T Consensus         3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (268)
T d2bgka1           3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK   82 (268)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            69999999999999999999999999999988888876665444444434457889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC-chhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR-TDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~-~~y~~sK  170 (264)
                      +|+||||||+....+..+.+.+.++|++++++|+.++++++|.++|+|.+++ .|+||+++|..+..+.++. ..|++||
T Consensus        83 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~ii~iss~~~~~~~~~~~~~Y~asK  161 (268)
T d2bgka1          83 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAK-KGSIVFTASISSFTAGEGVSHVYTATK  161 (268)
T ss_dssp             CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGT-CEEEEEECCGGGTCCCTTSCHHHHHHH
T ss_pred             cceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcC-CCCccccccccccccccccccccchhH
Confidence            9999999998776555688999999999999999999999999999999887 8999999999998876665 4899999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|+|++|.||+++|||||+|+||+++|+|.........+...+......+..+|+.+|||||++++||+|++++++
T Consensus       162 aal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pedvA~~v~fL~S~~s~~i  241 (268)
T d2bgka1         162 HAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAEDVADAVAYLAGDESKYV  241 (268)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHHHHHHHHHHhChhhCCc
Confidence            99999999999999999999999999999999988776555444443333223333899999999999999999999999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      |||+|.+|||++.
T Consensus       242 tGq~i~VDGG~t~  254 (268)
T d2bgka1         242 SGLNLVIDGGYTR  254 (268)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCceEEECcCccc
Confidence            9999999999975

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=4.3e-58  Score=371.69  Aligned_cols=236  Identities=25%  Similarity=0.383  Sum_probs=208.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +.+|+||++|||||++|||+++|++|+++|++|++++|+.+..          .++..+++|++|+++++++++++.+++
T Consensus         2 ~psl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~   71 (237)
T d1uzma1           2 KPPFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQ   71 (237)
T ss_dssp             CCCCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhc
Confidence            4579999999999999999999999999999999888876543          246789999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      |++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.++...|++|
T Consensus        72 g~iDiLVnnAG~~~~~--~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~Iv~isS~~~~~~~~~~~~Y~as  148 (237)
T d1uzma1          72 GPVEVLVSNAGLSADA--FLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNK-FGRMIFIGSVSGLWGIGNQANYAAS  148 (237)
T ss_dssp             SSCSEEEEECSCCC-------CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCCC-----CCHHHHHH
T ss_pred             CCceEEEeeecccccc--cHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccC-CCceEEEcchhhccCCcccHHHHHH
Confidence            9999999999987654  899999999999999999999999999999999988 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+++|+|+++.|++++|||||+|+||+++|+|....    .+...+......|. +|+.+|||||++++||+|+++++
T Consensus       149 Kaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~----~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~S~~s~~  223 (237)
T d1uzma1         149 KAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRAL----DERIQQGALQFIPA-KRVGTPAEVAGVVSFLASEDASY  223 (237)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHS----CHHHHHHHGGGCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhcc----CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            99999999999999999999999999999999998654    24444556667788 89999999999999999999999


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      +|||+|.+|||+.|
T Consensus       224 itG~~i~vdGG~~m  237 (237)
T d1uzma1         224 ISGAVIPVDGGMGM  237 (237)
T ss_dssp             CCSCEEEESTTTTC
T ss_pred             CcCCeEEECCCCCC
Confidence            99999999999875

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=8.9e-58  Score=372.25  Aligned_cols=243  Identities=30%  Similarity=0.450  Sum_probs=215.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .|+||++|||||++|||+++|++|+++|++|+++.|+++.. +. .+..   ...++++|++|+++++++++++.+++|+
T Consensus         2 ~l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~-~~-~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~G~   76 (248)
T d2d1ya1           2 LFAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGK-EV-AEAI---GGAFFQVDLEDERERVRFVEEAAYALGR   76 (248)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHH-HH-HHHH---TCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HH-HHHc---CCeEEEEeCCCHHHHHHHHHHHHHhcCC
Confidence            48999999999999999999999999999988888876542 32 2222   3467899999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      ||+||||||+..+.  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||+++|..+..+.++...|+++|+
T Consensus        77 iDiLVnnAG~~~~~--~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asKa  153 (248)
T d2d1ya1          77 VDVLVNNAAIAAPG--SALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVG-GGAIVNVASVQGLFAEQENAAYNASKG  153 (248)
T ss_dssp             CCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTT-CEEEEEECCGGGTSBCTTBHHHHHHHH
T ss_pred             CCeEEEeCcCCCCC--ChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccc-cccccccccccccccccccchhHHHHH
Confidence            99999999987665  899999999999999999999999999999999987 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+++|+|++|.|++++|||||+|+||+++|+|.......  ..++..+.+....|. +|+.+|||||++++||+|++++|
T Consensus       154 al~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~  232 (248)
T d2d1ya1         154 GLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHAL-RRLGKPEEVAEAVLFLASEKASF  232 (248)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcC
Confidence            999999999999999999999999999999987654332  223444556667788 89999999999999999999999


Q ss_pred             eeccEEEecCeeec
Q 041914          250 VTGHDLVVDGGFLI  263 (264)
Q Consensus       250 ~~G~~i~~dgG~~~  263 (264)
                      +|||+|.+|||++-
T Consensus       233 itG~~i~vDGG~ta  246 (248)
T d2d1ya1         233 ITGAILPVDGGMTA  246 (248)
T ss_dssp             CCSCEEEESTTGGG
T ss_pred             CCCcEEEcCcCccc
Confidence            99999999999874

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.5e-57  Score=369.71  Aligned_cols=240  Identities=33%  Similarity=0.468  Sum_probs=214.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++..+. .+..   +.++++||++|+++++++++++.+++|
T Consensus         1 M~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~-~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~~~g   76 (242)
T d1ulsa_           1 MRLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREA-AEAV---GAHPVVMDVADPASVERGFAEALAHLG   76 (242)
T ss_dssp             CTTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTT---TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHc---CCeEEEEecCCHHHHHHHHHHHHHhcC
Confidence            358999999999999999999999999999988888876655443 3332   467899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.++++++|.++|.|++++ .+.++++||. +..+.++...|++||
T Consensus        77 ~iDilVnnAG~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~~~i~~~ss~-~~~~~~~~~~Y~asK  152 (242)
T d1ulsa_          77 RLDGVVHYAGITRDN--FHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKN-PGSIVLTASR-VYLGNLGQANYAASM  152 (242)
T ss_dssp             SCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC-CEEEEEECCG-GGGCCTTCHHHHHHH
T ss_pred             CceEEEECCcccccC--chhhCcchhhhccccccchhhhhhhhhccccccccc-cceeeeeccc-cccCCCCCcchHHHH
Confidence            999999999987664  899999999999999999999999999999999877 6777777764 677888999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|+|++|.|++++|||||+|+||+++|+|....    .++..+.+....|. +|+.+|||+|++++||+|++++|+
T Consensus       153 aal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~----~~~~~~~~~~~~pl-~R~~~pedia~~v~fL~S~~s~~i  227 (242)
T d1ulsa_         153 AGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKV----PEKVREKAIAATPL-GRAGKPLEVAYAALFLLSDESSFI  227 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSS----CHHHHHHHHHTCTT-CSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcC----CHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhchhhCCC
Confidence            9999999999999999999999999999999997643    34455556667788 899999999999999999999999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      |||+|.+|||+++
T Consensus       228 tG~~i~vDGG~t~  240 (242)
T d1ulsa_         228 TGQVLFVDGGRTI  240 (242)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCcEEEECCCccC
Confidence            9999999999986

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.5e-57  Score=368.29  Aligned_cols=238  Identities=35%  Similarity=0.573  Sum_probs=215.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+|+||++|||||++|||+++|++|+++|++|++++|++++..+ +.+++. +++.++++|++|+++++++++++.++++
T Consensus         2 G~L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   79 (244)
T d1nffa_           2 GRLTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKA-MAAELA-DAARYVHLDVTQPAQWKAAVDTAVTAFG   79 (244)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHHhh-CcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence            36899999999999999999999999999998888887665544 444443 3688999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|.|++++ +|+||++||..+..+.+....|+++|
T Consensus        80 ~idilinnAG~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~asK  156 (244)
T d1nffa_          80 GLHVLVNNAGILNIG--TIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAG-RGSIINISSIEGLAGTVACHGYTATK  156 (244)
T ss_dssp             CCCEEEECCCCCCCB--CTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCeEEEECCcccCCC--chhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcC-cceEEeccccccccccccccchhhHH
Confidence            999999999987665  899999999999999999999999999999999987 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+++|+|++|.|++++|||||+|+||+++|+|......         ...+.|. +|+.+|||||++++||++++++++
T Consensus       157 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~---------~~~~~pl-~R~~~p~diA~~v~fL~s~~s~~i  226 (244)
T d1nffa_         157 FAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE---------DIFQTAL-GRAAEPVEVSNLVVYLASDESSYS  226 (244)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT---------TCSCCSS-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH---------HHHhccc-cCCCCHHHHHHHHHHHhChhhCCC
Confidence            999999999999999999999999999999999754321         1234677 899999999999999999999999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      |||+|.+|||++.
T Consensus       227 tG~~i~vDGG~~a  239 (244)
T d1nffa_         227 TGAEFVVDGGTVA  239 (244)
T ss_dssp             CSCEEEESTTGGG
T ss_pred             cCCEEEECCCeec
Confidence            9999999999864

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=6.5e-58  Score=372.38  Aligned_cols=240  Identities=28%  Similarity=0.503  Sum_probs=218.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +++|||||++|||+++|++|+++|++|++..++.++..+.+.+++.  ..++.++++|++|+++++++++++.+++|++|
T Consensus         2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   81 (244)
T d1edoa_           2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID   81 (244)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            6899999999999999999999999988877777666565555543  35789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||||.....  ++.+.+.++|++.+++|+.++++++|.++|+|++++ .|+||++||..+..+.++...|++||+|+
T Consensus        82 iLVnnAg~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~G~IVnisS~~~~~~~~~~~~Y~asKaal  158 (244)
T d1edoa_          82 VVVNNAGITRDT--LLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKR-KGRIINIASVVGLIGNIGQANYAAAKAGV  158 (244)
T ss_dssp             EEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCTHHHHCCTTCHHHHHHHHHH
T ss_pred             cccccccccccc--chhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcC-CcEEEEEcChhhcCCCCCCHHHHHHHHHH
Confidence            999999988665  899999999999999999999999999999999887 89999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh-CCCCCCeec
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA-CRDSEFVTG  252 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~-s~~~~~~~G  252 (264)
                      .+|+|+++.|++++|||||+|+||+++|+|....    .++..+.+....|. +|+.+|||||++++||+ +++++|+||
T Consensus       159 ~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~----~~~~~~~~~~~~pl-~R~~~p~dvA~~v~fLa~S~~a~~itG  233 (244)
T d1edoa_         159 IGFSKTAAREGASRNINVNVVCPGFIASDMTAKL----GEDMEKKILGTIPL-GRTGQPENVAGLVEFLALSPAASYITG  233 (244)
T ss_dssp             HHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTT----CHHHHHHHHTSCTT-CSCBCHHHHHHHHHHHHHCSGGGGCCS
T ss_pred             HHChHHHHHHHhhhCcEEEEEecceeccHHHHHh----hHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHHCCchhcCCcC
Confidence            9999999999999999999999999999998654    24555666777888 89999999999999997 899999999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      |+|.+|||++|
T Consensus       234 ~~i~vdGG~si  244 (244)
T d1edoa_         234 QAFTIDGGIAI  244 (244)
T ss_dssp             CEEEESTTTTC
T ss_pred             CeEEeCCCeeC
Confidence            99999999875

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.1e-57  Score=372.50  Aligned_cols=242  Identities=35%  Similarity=0.485  Sum_probs=217.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++..+..++ +. +++.++++|++++++++++++++.+++|+
T Consensus         2 dL~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   79 (254)
T d1hdca_           2 DLSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARE-LG-DAARYQHLDVTIEEDWQRVVAYAREEFGS   79 (254)
T ss_dssp             CCCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT-TG-GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-hC-CceEEEEcccCCHHHHHHHHHHHHHHcCC
Confidence            69999999999999999999999999999988888877666544433 32 47899999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.++...|++||+
T Consensus        80 iDilVnnAg~~~~~--~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asKa  156 (254)
T d1hdca_          80 VDGLVNNAGISTGM--FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAG-GGSIVNISSAAGLMGLALTSSYGASKW  156 (254)
T ss_dssp             CCEEEECCCCCCCS--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHHHHHH
T ss_pred             ccEEEecCcccccc--ccccccccccchhhhHHhhHHHHHHHHHHHHHhhcC-CCeecccccchhcccccchhhHHHHHH
Confidence            99999999997654  899999999999999999999999999999999887 899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCC-ChHHHHHHHHHHhCCCCCCe
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVL-RAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~edva~~~~~l~s~~~~~~  250 (264)
                      |+.+|+|++|.|++++|||||+|+||+++|+|..+....    ..+......|. +|+. .|||||++++||+|++++++
T Consensus       157 al~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~----~~~~~~~~~pl-~R~g~~PedvA~~v~fL~S~~a~~i  231 (254)
T d1hdca_         157 GVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIR----QGEGNYPNTPM-GRVGNEPGEIAGAVVKLLSDTSSYV  231 (254)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCC----CSTTSCTTSTT-SSCB-CHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHH----HHHHHHhCCCC-CCCCCCHHHHHHHHHHHhchhhCCC
Confidence            999999999999999999999999999999998655322    12334456677 7776 69999999999999999999


Q ss_pred             eccEEEecCeeec
Q 041914          251 TGHDLVVDGGFLI  263 (264)
Q Consensus       251 ~G~~i~~dgG~~~  263 (264)
                      |||+|.+|||++.
T Consensus       232 tG~~i~vDGG~t~  244 (254)
T d1hdca_         232 TGAELAVDGGWTT  244 (254)
T ss_dssp             CSCEEEESTTTTT
T ss_pred             CCceEEeCCCccC
Confidence            9999999999864

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2e-57  Score=372.82  Aligned_cols=245  Identities=29%  Similarity=0.438  Sum_probs=219.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .||++|||||++|||+++|++|+++|++|++++|+.++..+...+... ..++.++++|++|+++++++++++.++||+|
T Consensus         1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~i   80 (257)
T d2rhca1           1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV   80 (257)
T ss_dssp             CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            489999999999999999999999999988888876665544443332 2478999999999999999999999999999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHH--HHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV--MVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~--~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      |+||||||+....  ++.+.+.++|++++++|+.++++++|+++|+  |.+++ .++||+++|..+..+.+++..|++||
T Consensus        81 DilVnnAG~~~~~--~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~-~g~Ii~i~S~~~~~~~~~~~~Y~asK  157 (257)
T d2rhca1          81 DVLVNNAGRPGGG--ATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERG-TGRIVNIASTGGKQGVVHAAPYSASK  157 (257)
T ss_dssp             SEEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHT-EEEEEEECCGGGTSCCTTCHHHHHHH
T ss_pred             CEEEecccccCCC--ChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcC-CcccccccccccccccccchhHHHHH
Confidence            9999999987654  8999999999999999999999999999997  45555 68999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|.....       ....++..+.+....|. +|+.+|||||++++||+
T Consensus       158 aal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Pl-gR~~~pedia~~v~fL~  236 (257)
T d2rhca1         158 HGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPI-GRYVQPSEVAEMVAYLI  236 (257)
T ss_dssp             HHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            99999999999999999999999999999999876432       33456666777778898 99999999999999999


Q ss_pred             CCCCCCeeccEEEecCeee
Q 041914          244 CRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~  262 (264)
                      |++++++|||+|.+|||++
T Consensus       237 S~~s~~itG~~i~vDGG~~  255 (257)
T d2rhca1         237 GPGAAAVTAQALNVCGGLG  255 (257)
T ss_dssp             SGGGTTCCSCEEEESTTCC
T ss_pred             CchhcCCcCceEEECcCcc
Confidence            9999999999999999975

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=3.8e-57  Score=370.64  Aligned_cols=247  Identities=29%  Similarity=0.424  Sum_probs=218.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|++|||||++|||+++|++|+++|++|++++|+.++..+...+... .+++.++++|++|+++++++++++.++||+||
T Consensus         1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD   80 (255)
T d1gega_           1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   80 (255)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCcc
Confidence            37899999999999999999999999988888877665444333332 35789999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHH
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAV  173 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al  173 (264)
                      +||||||+....  ++.+.++++|++++++|+.++++++|+++|+|.+++..++|+++||..+..+.++...|++||+|+
T Consensus        81 ilVnnAG~~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal  158 (255)
T d1gega_          81 VIVNNAGVAPST--PIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAV  158 (255)
T ss_dssp             EEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHH
T ss_pred             EEEecccccccC--cHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHH
Confidence            999999987654  899999999999999999999999999999988776468899999999999999999999999999


Q ss_pred             HHHHHHHHHHhCcCCceEEEeeCCcccCccccccc-------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          174 IGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY-------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       174 ~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      ++|+|++|.|++++|||||+|+||+++|+|.....       ....++....+....|. +|+.+|||||++++||+|++
T Consensus       159 ~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~peevA~~v~fL~S~~  237 (255)
T d1gega_         159 RGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITL-GRLSEPEDVAACVSYLASPD  237 (255)
T ss_dssp             HHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGG
T ss_pred             HhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCch
Confidence            99999999999999999999999999999876432       22223344555667788 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ++++|||+|.+|||++|.
T Consensus       238 a~~itG~~i~vDGG~~~n  255 (255)
T d1gega_         238 SDYMTGQSLLIDGGMVFN  255 (255)
T ss_dssp             GTTCCSCEEEESSSSSCC
T ss_pred             hCCccCcEEEecCCEEeC
Confidence            999999999999999873

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-57  Score=369.45  Aligned_cols=245  Identities=29%  Similarity=0.486  Sum_probs=215.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+|+||++|||||++|||+++|+.|+++|++|+++.|+++.. +.+.++..  +..++++|++|+++++++++++.+++|
T Consensus         2 ~rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~-~~~~~~~~--~~~~~~~Dvs~~~~v~~~~~~~~~~~g   78 (250)
T d1ydea1           2 TRYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGG-RALEQELP--GAVFILCDVTQEDDVKTLVSETIRRFG   78 (250)
T ss_dssp             CTTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHhcC--CCeEEEccCCCHHHHHHHHHHHHHhcC
Confidence            479999999999999999999999999999988887765544 44444433  578899999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      +||+||||||+.... .++++.+.++|++++++|+.++++++|.++|+|+++  +|+||++||..+..+.+....|+++|
T Consensus        79 ~iDilVnnAG~~~~~-~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~--~G~Ii~isS~~~~~~~~~~~~Y~asK  155 (250)
T d1ydea1          79 RLDCVVNNAGHHPPP-QRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKS--QGNVINISSLVGAIGQAQAVPYVATK  155 (250)
T ss_dssp             CCCEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEECCHHHHHCCTTCHHHHHHH
T ss_pred             CCCEEEecccccccc-cccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhC--CCCCcccccccccccccCcchhHHHH
Confidence            999999999976543 378899999999999999999999999999999875  48999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+++|+|++|.|++++|||||+|+||+++|+|........  .....+......|+ +|+.+|||||++++||+|+ ++
T Consensus       156 aal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eva~~v~fL~Sd-a~  233 (250)
T d1ydea1         156 GAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPL-GRMGQPAEVGAAAVFLASE-AN  233 (250)
T ss_dssp             HHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTT-SSCBCHHHHHHHHHHHHHH-CT
T ss_pred             hhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCC-CCCCCHHHHHHHHHHHhCc-cC
Confidence            99999999999999999999999999999999987654332  22333334445677 8999999999999999985 88


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      |+|||+|.+|||++|
T Consensus       234 ~itG~~i~vDGG~~l  248 (250)
T d1ydea1         234 FCTGIELLVTGGAEL  248 (250)
T ss_dssp             TCCSCEEEESTTTTS
T ss_pred             CCcCCeEEECCCccc
Confidence            999999999999986

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1e-56  Score=368.91  Aligned_cols=246  Identities=31%  Similarity=0.458  Sum_probs=219.2

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +|+||++|||||++|||+++|+.|+++|++|+++.|+.+...+...+... ..++.+++||++|+++++++++++.+++|
T Consensus         2 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   81 (260)
T d1zema1           2 KFNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG   81 (260)
T ss_dssp             TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            58999999999999999999999999999988888876665444333332 24789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||..... .++.+.+.++|++++++|+.++++++|.++|+|.+++ .|+||++||..+..+.+.+..|++||
T Consensus        82 ~iDilVnnaG~~~~~-~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~II~isS~~~~~~~~~~~~Y~asK  159 (260)
T d1zema1          82 KIDFLFNNAGYQGAF-APVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQN-YGRIVNTASMAGVKGPPNMAAYGTSK  159 (260)
T ss_dssp             CCCEEEECCCCCCCC-BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHSCCTTBHHHHHHH
T ss_pred             CCCeehhhhcccccc-CccccccHHHHHhhccccccccccchhhHHhhhhhhc-CCCCCeeechhhccCCcchHHHHHHH
Confidence            999999999987542 3799999999999999999999999999999999877 89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc------------cCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA------------YGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      +|+.+|+|++|.|++++|||||+|+||+++|+|....            .....+...+.+....|. +|+.+|||||++
T Consensus       160 aal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~  238 (260)
T d1zema1         160 GAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM-RRYGDINEIPGV  238 (260)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT-SSCBCGGGSHHH
T ss_pred             HHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence            9999999999999999999999999999999985321            122345555666677888 899999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCe
Q 041914          239 VLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ++||+|++++|+|||+|.+|||
T Consensus       239 v~fL~S~~s~~itG~~i~VDGG  260 (260)
T d1zema1         239 VAFLLGDDSSFMTGVNLPIAGG  260 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEESCC
T ss_pred             HHHHhCchhcCccCCeEEeCCC
Confidence            9999999999999999999998

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=4.1e-56  Score=365.58  Aligned_cols=249  Identities=25%  Similarity=0.356  Sum_probs=220.0

Q ss_pred             cccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            8 NAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         8 ~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+.++|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+...  ..++.++++|++|+++++++++++
T Consensus         2 ~~~m~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~   81 (260)
T d1h5qa_           2 GFTISFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQI   81 (260)
T ss_dssp             CEEECCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcccCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHH
Confidence            356789999999999999999999999999999999999988776655444432  347899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------  159 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------  159 (264)
                      .+++|++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|.+++..+.|++++|......      
T Consensus        82 ~~~~g~iDilVnnAg~~~~~--~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~  159 (260)
T d1h5qa_          82 DADLGPISGLIANAGVSVVK--PATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLN  159 (260)
T ss_dssp             HHHSCSEEEEEECCCCCCCS--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETT
T ss_pred             HHHhCCCcEecccccccccC--CHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccc
Confidence            99999999999999987654  8999999999999999999999999999999976554778888888766543      


Q ss_pred             -CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          160 -GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       160 -~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                       .++...|+++|+|+.+|+|.+|.|++++|||||+|+||+++|++....    .++..+.+....|. +|+.+|||||++
T Consensus       160 ~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~----~~~~~~~~~~~~pl-~R~g~pedvA~~  234 (260)
T d1h5qa_         160 GSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHM----DKKIRDHQASNIPL-NRFAQPEEMTGQ  234 (260)
T ss_dssp             EECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGS----CHHHHHHHHHTCTT-SSCBCGGGGHHH
T ss_pred             cCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhcc----CHHHHHHHHhcCCC-CCCcCHHHHHHH
Confidence             357789999999999999999999999999999999999999998654    24455556667888 899999999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCeeec
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++||+|++++|+|||+|.+|||++|
T Consensus       235 v~fL~S~~s~~itG~~i~VDGG~~~  259 (260)
T d1h5qa_         235 AILLLSDHATYMTGGEYFIDGGQLI  259 (260)
T ss_dssp             HHHHHSGGGTTCCSCEEEECTTGGG
T ss_pred             HHHHhcchhCCCcCceEEECCCeec
Confidence            9999999999999999999999986

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=7e-56  Score=363.21  Aligned_cols=250  Identities=24%  Similarity=0.359  Sum_probs=217.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .++|+||++|||||++|||+++|++|+++|++|++++|+.+++.+..++... ...++++++|+++.++++++++++.++
T Consensus         1 ~f~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   80 (258)
T d1ae1a_           1 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHV   80 (258)
T ss_dssp             CCCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CcCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHH
Confidence            3789999999999999999999999999999999999887766554443332 257889999999999999999999999


Q ss_pred             c-CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           89 Y-GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        89 ~-~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      + +.+|+||||||.....  ++.+.+.++|++++++|+.+++++++.++|.|.+++ .|+||++||..+..+.+.+..|+
T Consensus        81 ~~g~idilinnag~~~~~--~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~-~g~ii~isS~~~~~~~~~~~~Y~  157 (258)
T d1ae1a_          81 FDGKLNILVNNAGVVIHK--EAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQ-NGNVIFLSSIAGFSALPSVSLYS  157 (258)
T ss_dssp             TTSCCCEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-SEEEEEECCGGGTSCCTTCHHHH
T ss_pred             hCCCcEEEeccccccccC--ccccCCHHHHhhhhhhcccccccccccccccccccc-ccccccccccccccccccchhHH
Confidence            8 6899999999998765  899999999999999999999999999999999988 89999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ++|+|+++|+|.+|.|++++|||||+|+||+++|+|........  ..+..+.+....|. +|+.+|||||++++||+|+
T Consensus       158 ~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-gR~~~pediA~~v~fL~S~  236 (258)
T d1ae1a_         158 ASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM-GRAGKPQEVSALIAFLCFP  236 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT-CSCBCHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCh
Confidence            99999999999999999999999999999999999987664432  23455556666788 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeec
Q 041914          246 DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~  263 (264)
                      +++++||++|.+|||++.
T Consensus       237 ~s~~itG~~i~vDGG~s~  254 (258)
T d1ae1a_         237 AASYITGQIIWADGGFTA  254 (258)
T ss_dssp             GGTTCCSCEEEESTTGGG
T ss_pred             hhCCCcCcEEEeCCCeec
Confidence            999999999999999975

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=5.8e-56  Score=367.08  Aligned_cols=250  Identities=25%  Similarity=0.389  Sum_probs=218.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++.+...+...    ..++.++++|++|+++++++++++.+
T Consensus         1 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   80 (274)
T d1xhla_           1 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA   80 (274)
T ss_dssp             CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHH
Confidence            58999999999999999999999999999988888876655444333322    14689999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +||++|+||||||..........+.+.++|++++++|+.++++++|+++|+|++++ .++|+++||..+..+.++...|+
T Consensus        81 ~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~-~g~ii~~ss~~~~~~~~~~~~Y~  159 (274)
T d1xhla_          81 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQAHSGYPYYA  159 (274)
T ss_dssp             HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSSCCTTSHHHH
T ss_pred             HcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccc-cccccchhhhhccccCCCCceeh
Confidence            99999999999998766555677789999999999999999999999999999887 78999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh-----HHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA-----DEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ++|+|+.+|+|++|.|++++|||||+|+||+++|++.........     .+.........|. +|+.+|||||++++||
T Consensus       160 asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPl-gR~g~pediA~~v~fL  238 (274)
T d1xhla_         160 CAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPV-GHCGKPEEIANIIVFL  238 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCC-CCCcCHHHHHHHHHHH
Confidence            999999999999999999999999999999999998765532211     1222334556788 8999999999999999


Q ss_pred             hCC-CCCCeeccEEEecCeeec
Q 041914          243 ACR-DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       243 ~s~-~~~~~~G~~i~~dgG~~~  263 (264)
                      +|+ .++|+|||+|.+|||++|
T Consensus       239 ~S~d~s~~itG~~i~vDGG~~l  260 (274)
T d1xhla_         239 ADRNLSSYIIGQSIVADGGSTL  260 (274)
T ss_dssp             HCHHHHTTCCSCEEEESTTGGG
T ss_pred             cCCccccCccCcEEEeCcCHHH
Confidence            996 589999999999999976

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.6e-56  Score=361.63  Aligned_cols=240  Identities=26%  Similarity=0.418  Sum_probs=211.8

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +||+||++|||||++|||+++|++|+++|++|++++|+.++..+ +.++..  .+.++.+|++|++++++++    +++|
T Consensus         1 mdl~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~-~~~~~~--~~~~~~~Dv~~~~~v~~~~----~~~g   73 (242)
T d1cyda_           1 LNFSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVS-LAKECP--GIEPVCVDLGDWDATEKAL----GGIG   73 (242)
T ss_dssp             CCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHST--TCEEEECCTTCHHHHHHHH----TTCC
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HHHhcC--CCeEEEEeCCCHHHHHHHH----HHcC
Confidence            46999999999999999999999999999998888887665544 333333  4678999999999887665    4679


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ++|+||||||+....  ++.+.+.++|++.+++|+.++++++|.++|.|.+++..|+||+++|..+..+.++...|+++|
T Consensus        74 ~iDilVnnAg~~~~~--~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK  151 (242)
T d1cyda_          74 PVDLLVNNAALVIMQ--PFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTK  151 (242)
T ss_dssp             CCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHH
T ss_pred             CCeEEEECCccccch--hHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchH
Confidence            999999999987654  899999999999999999999999999999876654378999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCe
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFV  250 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~  250 (264)
                      +|+.+|+|+++.|++++|||||+|+||+++|+|......  .++..+.+....|. +|+.+|||||++++||+|++++|+
T Consensus       152 aal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~--~~~~~~~~~~~~pl-~R~~~peeva~~v~fL~S~~s~~i  228 (242)
T d1cyda_         152 GAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSA--DPEFARKLKERHPL-RKFAEVEDVVNSILFLLSDRSAST  228 (242)
T ss_dssp             HHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTC--CHHHHHHHHHHSTT-SSCBCHHHHHHHHHHHHSGGGTTC
T ss_pred             HHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcC--CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCc
Confidence            999999999999999999999999999999999876542  24445555566788 899999999999999999999999


Q ss_pred             eccEEEecCeee
Q 041914          251 TGHDLVVDGGFL  262 (264)
Q Consensus       251 ~G~~i~~dgG~~  262 (264)
                      |||+|.+||||+
T Consensus       229 tG~~i~vDGG~~  240 (242)
T d1cyda_         229 SGGGILVDAGYL  240 (242)
T ss_dssp             CSSEEEESTTGG
T ss_pred             CCceEEeCcchh
Confidence            999999999986

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.7e-56  Score=360.25  Aligned_cols=241  Identities=28%  Similarity=0.429  Sum_probs=212.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ...|+||++|||||++|||+++|++|+++|++|++++|+.+++.+ +.++..  .+..+.+|++|++++++++    +++
T Consensus         2 ~~~L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~-~~~~~~--~~~~~~~Dv~d~~~v~~~~----~~~   74 (244)
T d1pr9a_           2 ELFLAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDS-LVRECP--GIEPVCVDLGDWEATERAL----GSV   74 (244)
T ss_dssp             CCCCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-HHHHST--TCEEEECCTTCHHHHHHHH----TTC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHH-HHHhcC--CCeEEEEeCCCHHHHHHHH----HHh
Confidence            456999999999999999999999999999998888887666543 444433  4678999999999987766    467


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      |++|+||||||+....  ++.+.+.++|++.+++|+.++++++|.++|.|.++...|+||+++|..+..+.+....|++|
T Consensus        75 g~iDilVnnAg~~~~~--~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~as  152 (244)
T d1pr9a_          75 GPVDLLVNNAAVALLQ--PFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCST  152 (244)
T ss_dssp             CCCCEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHH
T ss_pred             CCceEEEecccccccc--chhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhh
Confidence            9999999999997665  89999999999999999999999999999977654337999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+|+++|+|++|.|++++|||||+|+||+++|+|......  ..+..+.+....|. +|+.+|||||++++||+|+.++|
T Consensus       153 Kaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~--~~~~~~~~~~~~pl-~R~~~peevA~~v~fL~S~~a~~  229 (244)
T d1pr9a_         153 KGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWS--DPHKAKTMLNRIPL-GKFAEVEHVVNAILFLLSDRSGM  229 (244)
T ss_dssp             HHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSC--SHHHHHHHHTTCTT-CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred             HHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhcc--ChHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhCC
Confidence            9999999999999999999999999999999999875532  23444555667888 89999999999999999999999


Q ss_pred             eeccEEEecCeee
Q 041914          250 VTGHDLVVDGGFL  262 (264)
Q Consensus       250 ~~G~~i~~dgG~~  262 (264)
                      +|||+|.+||||+
T Consensus       230 itG~~i~vDGG~~  242 (244)
T d1pr9a_         230 TTGSTLPVEGGFW  242 (244)
T ss_dssp             CCSCEEEESTTGG
T ss_pred             cCCcEEEECccHh
Confidence            9999999999986

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.9e-56  Score=362.67  Aligned_cols=244  Identities=29%  Similarity=0.424  Sum_probs=215.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++. +.+.+++. .+..++++|++|+++++++++++.+++|+
T Consensus         3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~-~~~~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~   80 (253)
T d1hxha_           3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAG-QQLAAELG-ERSMFVRHDVSSEADWTLVMAAVQRRLGT   80 (253)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHHHC-TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHHHhC-CCeEEEEeecCCHHHHHHHHHHHHHHhCC
Confidence            58999999999999999999999999999988877766554 44444443 36788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|+++  .|+||++||..+..+.+....|++||+
T Consensus        81 iDilVnnAG~~~~~--~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~--~G~Iv~isS~~~~~~~~~~~~Y~asKa  156 (253)
T d1hxha_          81 LNVLVNNAGILLPG--DMETGRLEDFSRLLKINTESVFIGCQQGIAAMKET--GGSIINMASVSSWLPIEQYAGYSASKA  156 (253)
T ss_dssp             CCEEEECCCCCCCB--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTT--CEEEEEECCGGGTSCCTTBHHHHHHHH
T ss_pred             CCeEEecccccCCC--CcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCceecccchhhhcCccccccccchhH
Confidence            99999999987665  89999999999999999999999999999999765  599999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhCc--CCceEEEeeCCcccCcccccccCCC-hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          172 AVIGLVRSASVQLGV--HGIRVNCVSPHGLATPLTCHAYGMP-ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       172 al~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      |+.+|+|++|.|+++  +|||||+|+||+++|+|........ .++.........|. +|+.+|||||++++||+|++++
T Consensus       157 al~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-gr~~~pedvA~~v~fL~S~~s~  235 (253)
T d1hxha_         157 AVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRA-GRAYMPERIAQLVLFLASDESS  235 (253)
T ss_dssp             HHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTT-CCEECHHHHHHHHHHHHSGGGT
T ss_pred             HHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCcccccc-CCCCCHHHHHHHHHHHhChhhC
Confidence            999999999999987  4599999999999999987554332 23334444444566 8999999999999999999999


Q ss_pred             CeeccEEEecCeee
Q 041914          249 FVTGHDLVVDGGFL  262 (264)
Q Consensus       249 ~~~G~~i~~dgG~~  262 (264)
                      |+|||+|.+|||++
T Consensus       236 ~itG~~i~VDGG~~  249 (253)
T d1hxha_         236 VMSGSELHADNSIL  249 (253)
T ss_dssp             TCCSCEEEESSSCT
T ss_pred             CCcCcEEEECccHh
Confidence            99999999999985

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-55  Score=367.96  Aligned_cols=248  Identities=23%  Similarity=0.369  Sum_probs=219.3

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh------CCCcEEEEEecCCCHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI------GVGKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~------~~~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      ..|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+..      ...++.++++|++|++++++++++
T Consensus         8 g~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~   87 (297)
T d1yxma1           8 GLLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS   87 (297)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHH
Confidence            45999999999999999999999999999998888887766544433322      125799999999999999999999


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +.+++|++|+||||||+....  ++.+.+.++|++++++|+.++++++|+++|.|.+++ .++||++|+ .+..+.+...
T Consensus        88 ~~~~~G~iDiLVnnAg~~~~~--~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~g~Ii~~ss-~~~~~~~~~~  163 (297)
T d1yxma1          88 TLDTFGKINFLVNNGGGQFLS--PAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEH-GGSIVNIIV-PTKAGFPLAV  163 (297)
T ss_dssp             HHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHH-CEEEEEECC-CCTTCCTTCH
T ss_pred             HHHHhCCeEEEEeeccccccC--chhhhhhhhhhhhhcccccchhhHHHHHHHhhcccc-ccccccccc-cccccccccc
Confidence            999999999999999987655  899999999999999999999999999999999887 788998865 4566788999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      .|+++|+|+.+|+|++|.|++++|||||+|+||+|+|++.........++..+......|. +|+.+|||||++++||+|
T Consensus       164 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl-gR~g~pedvA~~v~fL~S  242 (297)
T d1yxma1         164 HSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA-KRIGVPEEVSSVVCFLLS  242 (297)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT-SSCBCTHHHHHHHHHHHS
T ss_pred             cchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhC
Confidence            9999999999999999999999999999999999999998655443344555555666788 899999999999999999


Q ss_pred             CCCCCeeccEEEecCeeec
Q 041914          245 RDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       245 ~~~~~~~G~~i~~dgG~~~  263 (264)
                      ++++|+|||+|.+|||++|
T Consensus       243 d~s~~iTG~~i~VDGG~sl  261 (297)
T d1yxma1         243 PAASFITGQSVDVDGGRSL  261 (297)
T ss_dssp             GGGTTCCSCEEEESTTGGG
T ss_pred             chhcCcCCcEEEeCcChhh
Confidence            9999999999999999986

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.8e-55  Score=363.88  Aligned_cols=251  Identities=27%  Similarity=0.401  Sum_probs=213.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.+++.+..++....    .++.++++|++|+++++++++++.
T Consensus         1 prL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   80 (272)
T d1xkqa_           1 PRFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL   80 (272)
T ss_dssp             CTTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHH
Confidence            3689999999999999999999999999999988888776654444433322    468999999999999999999999


Q ss_pred             HhcCCccEEEEcCCCCCCCC--CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCc
Q 041914           87 QNYGQLDIMFSNAGILSSSD--QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRT  164 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~  164 (264)
                      +++|++|+||||||...+..  ....+.+.++|++++++|+.++++++|+++|+|++++ .+.|+++||..+..+.++..
T Consensus        81 ~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~-g~iI~~~Ss~a~~~~~~~~~  159 (272)
T d1xkqa_          81 KQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAGPQAQPDFL  159 (272)
T ss_dssp             HHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGSSSCCCSSH
T ss_pred             HHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccC-CccccccchhccccCCCCcc
Confidence            99999999999999876541  2445788899999999999999999999999998765 44445555567788999999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCCh-----HHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPA-----DEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      .|++||+|+.+|+|++|.||+++|||||+|+||+++|+|.........     .+.........|. +|+.+|||||+++
T Consensus       160 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~pediA~~v  238 (272)
T d1xkqa_         160 YYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPI-GAAGKPEHIANII  238 (272)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTT-SSCBCHHHHHHHH
T ss_pred             hhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCC-CCCcCHHHHHHHH
Confidence            999999999999999999999999999999999999999876542211     2223345566788 8999999999999


Q ss_pred             HHHhCCC-CCCeeccEEEecCeeec
Q 041914          240 LFLACRD-SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~~-~~~~~G~~i~~dgG~~~  263 (264)
                      +||+|++ +.|+|||+|.+|||++|
T Consensus       239 ~fL~S~~as~~iTG~~i~vDGG~~l  263 (272)
T d1xkqa_         239 LFLADRNLSFYILGQSIVADGGTSL  263 (272)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHhCcchhCCccCeEEEeCcCHHH
Confidence            9999976 57999999999999987

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=1.5e-55  Score=362.94  Aligned_cols=249  Identities=30%  Similarity=0.438  Sum_probs=201.9

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.+++.+...+...    ..++.++++|++|+++++++++++.+
T Consensus         2 rl~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (264)
T d1spxa_           2 RFAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG   81 (264)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHH
Confidence            68999999999999999999999999999988888877665444433322    24699999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC-CCCCCCCCCc
Q 041914           88 NYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV-AGSCGGKRRT  164 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~-~~~~~~~~~~  164 (264)
                      +||++|+||||||+..+.  ..++.+.+.++|++.+++|+.++++++|.++|+|++++  +.+|+++|. .+..+.+...
T Consensus        82 ~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~--g~iI~~~S~~~~~~~~~~~~  159 (264)
T d1spxa_          82 KFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK--GEIVNISSIASGLHATPDFP  159 (264)
T ss_dssp             HHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCTTSSSSCCTTSH
T ss_pred             HhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCcccccc--CcceeeeeeccccccCCCch
Confidence            999999999999986433  23567789999999999999999999999999998764  566665555 4678999999


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-----ChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-----PADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      .|++||+|+++|+|++|.|++++|||||+|+||+++|+|.......     ........+....|. +|+.+|||||+++
T Consensus       160 ~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~g~pedvA~~v  238 (264)
T d1spxa_         160 YYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA-GVMGQPQDIAEVI  238 (264)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT-SSCBCHHHHHHHH
T ss_pred             hhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCC-CCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999999987654211     112223334455788 8999999999999


Q ss_pred             HHHhCC-CCCCeeccEEEecCeeec
Q 041914          240 LFLACR-DSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       240 ~~l~s~-~~~~~~G~~i~~dgG~~~  263 (264)
                      +||+|+ .++|+|||+|.+|||++|
T Consensus       239 ~fL~S~~~s~~itG~~i~vDGG~sl  263 (264)
T d1spxa_         239 AFLADRKTSSYIIGHQLVVDGGSSL  263 (264)
T ss_dssp             HHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred             HHHhCCcccCCccCceEEeCCChhh
Confidence            999995 489999999999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.5e-54  Score=356.04  Aligned_cols=248  Identities=30%  Similarity=0.428  Sum_probs=213.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++|+||++|||||++|||+++|++|+++|++|+++.|+.+++.+. .+... .++..+.+|++++++++++++++.++++
T Consensus         1 M~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~-~~~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g   78 (276)
T d1bdba_           1 MKLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAEL-ETDHG-DNVLGIVGDVRSLEDQKQAASRCVARFG   78 (276)
T ss_dssp             CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHHG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHHcC-CCeeEEecccccHHHHHHHHHHHHHHhC
Confidence            458999999999999999999999999999999888876665443 33332 4789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCC---CccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           91 QLDIMFSNAGILSSSDQ---TVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~---~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      ++|+||||||+......   ...+.+.++|++++++|+.++++++|.++|.|++++  |+||+++|..+..+.+....|+
T Consensus        79 ~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~--g~iI~i~S~~~~~~~~~~~~Y~  156 (276)
T d1bdba_          79 KIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR--GNVIFTISNAGFYPNGGGPLYT  156 (276)
T ss_dssp             CCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT--CEEEEECCGGGTSTTSSCHHHH
T ss_pred             CcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC--CCceeeeechhccCCCCCchHH
Confidence            99999999998654421   234455678999999999999999999999998764  8999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC------ChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM------PADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +||+|+.+|+|++|.|+++. ||||+|+||+++|+|.......      ..++..+.+....|. +|+.+|||+|++++|
T Consensus       157 asKaal~~ltr~lA~ela~~-IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~g~peeva~~v~f  234 (276)
T d1bdba_         157 AAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI-GRMPEVEEYTGAYVF  234 (276)
T ss_dssp             HHHHHHHHHHHHHHHHHTTT-CEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT-SSCCCGGGGSHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcc-eEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC-CCCcCHHHHHHHHHH
Confidence            99999999999999999974 9999999999999986543211      123345566777888 899999999999999


Q ss_pred             HhCC-CCCCeeccEEEecCeeecC
Q 041914          242 LACR-DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       242 l~s~-~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+|+ +++|+|||+|.+|||+++|
T Consensus       235 L~S~~~a~~itG~~i~VDGG~~~~  258 (276)
T d1bdba_         235 FATRGDAAPATGALLNYDGGLGVR  258 (276)
T ss_dssp             HHCHHHHTTCSSCEEEESSSGGGC
T ss_pred             HcCCcccCCeeCcEEEECcChhhc
Confidence            9985 6899999999999999875

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-54  Score=356.14  Aligned_cols=248  Identities=21%  Similarity=0.265  Sum_probs=208.9

Q ss_pred             ccccCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      +..+|+||++|||||+|  |||+++|++|+++|++|++..|+++ ..+...+.. ..+...++++|++|+++++++++++
T Consensus         2 ~~~~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~   80 (256)
T d1ulua_           2 LTVDLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEALGGALLFRADVTQDEELDALFAGV   80 (256)
T ss_dssp             EEECCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHH-HHHHHHHhhhccCcccccccccCCHHHHHHHHHHH
Confidence            45689999999999987  9999999999999999777666543 333333322 2346788999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                      .+++|++|+||||||.....  ..++.+.+.++|++.+++|+.+++.++|.++|+|++   .|+||++||..+..+.++.
T Consensus        81 ~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~---~G~Iv~isS~~~~~~~~~~  157 (256)
T d1ulua_          81 KEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLRE---GGGIVTLTYYASEKVVPKY  157 (256)
T ss_dssp             HHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEE---EEEEEEEECGGGTSBCTTC
T ss_pred             HHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhcc---CCEEEEEeehHhcCCCCCc
Confidence            99999999999999986432  235778899999999999999999999999999876   5799999999999999999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~  243 (264)
                      ..|+++|+|+++|+|++|.||+++|||||+|+||+++|++.....  ..++..+.+....|. +|+.+|||||++++||+
T Consensus       158 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~--~~~~~~~~~~~~~pl-~R~~~pedvA~~v~fL~  234 (256)
T d1ulua_         158 NVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIP--GFTKMYDRVAQTAPL-RRNITQEEVGNLGLFLL  234 (256)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------CHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchh--hhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHh
Confidence            999999999999999999999999999999999999999876542  224455556667788 89999999999999999


Q ss_pred             CCCCCCeeccEEEecCeeec
Q 041914          244 CRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |++++++|||+|.+|||+++
T Consensus       235 S~~s~~itG~~i~VDGG~~~  254 (256)
T d1ulua_         235 SPLASGITGEVVYVDAGYHI  254 (256)
T ss_dssp             SGGGTTCCSCEEEESTTGGG
T ss_pred             CchhCCccCCeEEECcCEeC
Confidence            99999999999999999986

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=1.5e-54  Score=354.49  Aligned_cols=239  Identities=19%  Similarity=0.201  Sum_probs=209.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      |+|||||++|||+++|++|+++|++|++..|+.+.. +++.....    .+..+|+++.++++++++++.++||+||+||
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~-~~~~~~~~----~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLV   76 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQK-DELEAFAE----TYPQLKPMSEQEPAELIEAVTSAYGQVDVLV   76 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSH-HHHHHHHH----HCTTSEECCCCSHHHHHHHHHHHHSCCCEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHH-HHHHhhhC----cEEEeccCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            799999999999999999999999988777765554 33333211    2457899999999999999999999999999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHH
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGL  176 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~  176 (264)
                      ||||+.... .++.+.+.++|++.+++|+.++++++|.++|+|++++ .|+||++||..+..+.+....|++||+|+.+|
T Consensus        77 nNAg~~~~~-~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~-~G~IV~isS~~~~~~~~~~~~Y~asKaal~~l  154 (252)
T d1zmta1          77 SNDIFAPEF-QPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRK-SGHIIFITSATPFGPWKELSTYTSARAGACTL  154 (252)
T ss_dssp             EECCCCCCC-CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CCEEEEECCSTTTSCCTTCHHHHHHHHHHHHH
T ss_pred             ECCcCCCCC-CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccc-cceeecccccccccccccccccccccccHHHH
Confidence            999976542 4899999999999999999999999999999999987 89999999999999999999999999999999


Q ss_pred             HHHHHHHhCcCCceEEEeeCCcccCcccccccC----CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          177 VRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG----MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       177 ~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      +|++|.|++++|||||+|+||+++|++......    ...++..+.+....|+ +|+.+|||||++++||+|++++|+||
T Consensus       155 t~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl-~R~g~pedvA~~v~fL~S~~s~~iTG  233 (252)
T d1zmta1         155 ANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL-QRLGTQKELGELVAFLASGSCDYLTG  233 (252)
T ss_dssp             HHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS-SSCBCHHHHHHHHHHHHTTSCGGGTT
T ss_pred             HHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhCchhcCCcC
Confidence            999999999999999999999999998765421    1123444555666788 89999999999999999999999999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      |+|.+|||++|
T Consensus       234 ~~i~vdGG~~~  244 (252)
T d1zmta1         234 QVFWLAGGFPM  244 (252)
T ss_dssp             CEEEESTTCCC
T ss_pred             CeEEECCCcee
Confidence            99999999986

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=4.6e-54  Score=349.11  Aligned_cols=239  Identities=32%  Similarity=0.509  Sum_probs=206.0

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++..+... ..+ +++.++++|++++++++++++++.+++|+
T Consensus         2 ~l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~-~~~~~~~~Dls~~~~i~~~~~~i~~~~g~   79 (241)
T d2a4ka1           2 RLSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVA-ALE-AEAIAVVADVSDPKAVEAVFAEALEEFGR   79 (241)
T ss_dssp             TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH-TCC-SSEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-HcC-CceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            5899999999999999999999999999999988888776644433 333 47889999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||.....  ++.+.+.++|++.+++|+.+++.++|.++|+|.++   +.++++|| .+..+.|++..|+++|+
T Consensus        80 iDiLinnAg~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~---~~i~~~ss-~a~~~~~~~~~Y~~sK~  153 (241)
T d2a4ka1          80 LHGVAHFAGVAHSA--LSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEG---GSLVLTGS-VAGLGAFGLAHYAAGKL  153 (241)
T ss_dssp             CCEEEEGGGGTTTT--C----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTT---CEEEEECC-CTTCCHHHHHHHHHCSS
T ss_pred             ccEecccccccccc--chhhhhccccccccccccccccccccccccccccc---cceeeccc-cccccccCccccchhhH
Confidence            99999999987654  89999999999999999999999999999988753   45555555 45556688999999999


Q ss_pred             HHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCee
Q 041914          172 AVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVT  251 (264)
Q Consensus       172 al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~  251 (264)
                      |+++|+|++|.|++++|||||+|+||+++|+|....   + ++..+.+....|. +|+.+|||||++++||+|++++++|
T Consensus       154 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~---~-~~~~~~~~~~~p~-~r~~~p~dva~~v~fL~S~~s~~it  228 (241)
T d2a4ka1         154 GVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGL---P-PWAWEQEVGASPL-GRAGRPEEVAQAALFLLSEESAYIT  228 (241)
T ss_dssp             HHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTS---C-HHHHHHHHHTSTT-CSCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred             HHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhh---h-HhHHHHHHhCCCC-CCCcCHHHHHHHHHHHhcchhCCCc
Confidence            999999999999999999999999999999987533   2 4444555556788 8999999999999999999999999


Q ss_pred             ccEEEecCeeec
Q 041914          252 GHDLVVDGGFLI  263 (264)
Q Consensus       252 G~~i~~dgG~~~  263 (264)
                      |++|.+|||+++
T Consensus       229 G~~i~vDGG~s~  240 (241)
T d2a4ka1         229 GQALYVDGGRSI  240 (241)
T ss_dssp             SCEEEESTTTTT
T ss_pred             CceEEeCCCccc
Confidence            999999999986

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=1e-53  Score=351.17  Aligned_cols=245  Identities=28%  Similarity=0.460  Sum_probs=215.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +|+||++|||||++|||+++|+.|+++|++|++..++.++..+.+.+++.  ..+++++++|++|+++++++++++.+++
T Consensus         3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~   82 (259)
T d1ja9a_           3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF   82 (259)
T ss_dssp             TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence            48999999999999999999999999999988888887776666555543  2578999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~  168 (264)
                      |+||+||||||.....  ++.+.+.++|++.+++|+.++++++|.++|+|++   ++++++++|..+. .+.+.+..|++
T Consensus        83 g~idilinnag~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~~iii~s~~~~~~~~~~~~~Y~a  157 (259)
T d1ja9a_          83 GGLDFVMSNSGMEVWC--DELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRR---GGRIILTSSIAAVMTGIPNHALYAG  157 (259)
T ss_dssp             SCEEEEECCCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEE---EEEEEEECCGGGTCCSCCSCHHHHH
T ss_pred             CCCcEEEecccccccc--ccccchHHHHHHHHhhccceeeeehhhhhhhhhc---CCcccccccccccccCCCCchhHHH
Confidence            9999999999987655  8999999999999999999999999999999976   3577777666554 46889999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccccccc---------CCChHHHHhhcCCCCCCCCCCCChHHHHHHH
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAY---------GMPADEVEKLFEPQTPLEGVVLRAGHVADAV  239 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~  239 (264)
                      +|+|+.+|+|.+|.|++++|||||+|+||+++|+|.....         ....++..+.+....|. +|+.+|+||++++
T Consensus       158 sK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~g~p~eVa~~v  236 (259)
T d1ja9a_         158 SKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPL-KRIGYPADIGRAV  236 (259)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTT-SSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCC-CCCcCHHHHHHHH
Confidence            9999999999999999999999999999999999865321         22345556666677888 8999999999999


Q ss_pred             HHHhCCCCCCeeccEEEecCeee
Q 041914          240 LFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       240 ~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      +||+|++++++||++|.+|||.+
T Consensus       237 ~fL~S~~a~~itG~~i~vDGG~~  259 (259)
T d1ja9a_         237 SALCQEESEWINGQVIKLTGGGI  259 (259)
T ss_dssp             HHHHSGGGTTCCSCEEEESTTCC
T ss_pred             HHHhCchhcCCcCceEEeCCCCC
Confidence            99999999999999999999974

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-53  Score=345.29  Aligned_cols=230  Identities=26%  Similarity=0.392  Sum_probs=204.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+...+    .    ...++.+|+++.      ++.+.++++++
T Consensus         2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~----~----~~~~~~~Dv~~~------~~~~~~~~g~i   67 (234)
T d1o5ia_           2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----S----GHRYVVCDLRKD------LDLLFEKVKEV   67 (234)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----T----CSEEEECCTTTC------HHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh----c----CCcEEEcchHHH------HHHHHHHhCCC
Confidence            689999999999999999999999999998888887543322    1    335788999864      45667788999


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||||+....  ++.+.+.++|++.+++|+.++++++|.++|+|++++ .|+||+++|..+..+.+....|+++|+|
T Consensus        68 D~lVnnAG~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~-~G~ii~i~S~~~~~~~~~~~~Y~asKaa  144 (234)
T d1o5ia_          68 DILVLNAGGPKAG--FFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKG-WGRIVAITSFSVISPIENLYTSNSARMA  144 (234)
T ss_dssp             SEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTBHHHHHHHHH
T ss_pred             cEEEecccccCCc--chhhhhhHHHHHHhhhhhhhhhhhhhcccccccccc-cccccccccccccccccccccchhHHHH
Confidence            9999999987554  899999999999999999999999999999999887 8999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeec
Q 041914          173 VIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTG  252 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G  252 (264)
                      +.+|+|++|.|++++|||||+|+||+++|++.....   .++..+.+....|. +|+.+|||||++++||+|++++|+||
T Consensus       145 l~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~---~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~S~~s~~itG  220 (234)
T d1o5ia_         145 LTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELL---SEEKKKQVESQIPM-RRMAKPEEIASVVAFLCSEKASYLTG  220 (234)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHS---CHHHHHHHHTTSTT-SSCBCHHHHHHHHHHHHSGGGTTCCS
T ss_pred             HHHHHHHHHHHhcccCeEEeecccCccchhhhhhhc---CHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChhhcCCcC
Confidence            999999999999999999999999999999986553   23445566677888 89999999999999999999999999


Q ss_pred             cEEEecCeeec
Q 041914          253 HDLVVDGGFLI  263 (264)
Q Consensus       253 ~~i~~dgG~~~  263 (264)
                      |+|.+|||++-
T Consensus       221 ~~i~vDGG~s~  231 (234)
T d1o5ia_         221 QTIVVDGGLSK  231 (234)
T ss_dssp             CEEEESTTCCC
T ss_pred             cEEEECccccc
Confidence            99999999863

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=5.1e-53  Score=349.44  Aligned_cols=252  Identities=29%  Similarity=0.415  Sum_probs=217.9

Q ss_pred             cccccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHH
Q 041914            6 MCNAKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus         6 ~~~~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      +.+.+.+|+||++|||||++|||+++|++|+++|++|++++++.++..+.+.+++.  ..++.++++|++|+++++++++
T Consensus         9 ~~~~~~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~   88 (272)
T d1g0oa_           9 LGPQSASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFE   88 (272)
T ss_dssp             SSGGGGCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCCcCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHH
Confidence            45567789999999999999999999999999999998888887776665555442  3579999999999999999999


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKR  162 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~  162 (264)
                      ++.+.+|++|++|||+|.....  ++.+.+.++|++.+++|+.++++++|.++|+|.+   .+++++++|..+. .+.+.
T Consensus        89 ~~~~~~g~idilV~nag~~~~~--~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~---~g~~i~i~s~~~~~~~~~~  163 (272)
T d1g0oa_          89 EAVKIFGKLDIVCSNSGVVSFG--HVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEI---GGRLILMGSITGQAKAVPK  163 (272)
T ss_dssp             HHHHHHSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCT---TCEEEEECCGGGTCSSCSS
T ss_pred             HHHHHhCCCCccccccccchhh--hhhhhhhhHHHHHhhhccceeeeecccccccccc---ccccccccccccccccccc
Confidence            9999999999999999987665  8999999999999999999999999999999976   4688888877654 45777


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--------CChHHHH-hhcCCCCCCCCCCCChH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--------MPADEVE-KLFEPQTPLEGVVLRAG  233 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~e  233 (264)
                      ...|+++|+|+++|+|++|.||+++|||||+|+||+++|+|......        ...++.. .......|. +|+.+||
T Consensus       164 ~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-gR~~~pe  242 (272)
T d1g0oa_         164 HAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL-RRVGLPI  242 (272)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT-CSCBCHH
T ss_pred             hhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC-CCCcCHH
Confidence            78899999999999999999999999999999999999998654321        1122222 223456778 8999999


Q ss_pred             HHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          234 HVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       234 dva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      |||++++||+++.++++||++|.+|||++|
T Consensus       243 evA~~v~fL~s~~s~~itG~~i~vDGG~~m  272 (272)
T d1g0oa_         243 DIARVVCFLASNDGGWVTGKVIGIDGGACM  272 (272)
T ss_dssp             HHHHHHHHHHSGGGTTCCSCEEEESTTCCC
T ss_pred             HHHHHHHHHhCchhcCccCceEeECCCCCC
Confidence            999999999999999999999999999976

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-52  Score=340.08  Aligned_cols=242  Identities=31%  Similarity=0.450  Sum_probs=209.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      |.+|+||++|||||++|||+++++.|+++|++|++++|+++++.    +..+...+....+|+.+.+.++..    .+.+
T Consensus         1 m~~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~----~~~~~~~~~~~~~d~~~~~~~~~~----~~~~   72 (245)
T d2ag5a1           1 MGRLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQ----ELEKYPGIQTRVLDVTKKKQIDQF----ANEV   72 (245)
T ss_dssp             CCTTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHG----GGGGSTTEEEEECCTTCHHHHHHH----HHHC
T ss_pred             CCCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHH----HHHhccCCceeeeecccccccccc----cccc
Confidence            34599999999999999999999999999999988888754432    222234678889999887665544    4566


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhc
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHM  168 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~  168 (264)
                      +++|+||||+|.....  ++.+.+.++|++.+++|+.+++.++|.++|+|.+++ .|+||+++|..+. .+.+....|++
T Consensus        73 ~~id~lVn~ag~~~~~--~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~-~g~Ii~isS~~~~~~~~~~~~~Y~~  149 (245)
T d2ag5a1          73 ERLDVLFNVAGFVHHG--TVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK-SGNIINMSSVASSVKGVVNRCVYST  149 (245)
T ss_dssp             SCCSEEEECCCCCCCB--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCSBTTTBCCTTBHHHHH
T ss_pred             ccceeEEecccccCCC--ChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCC-CceeeeeechhhccCCccchhHHHH
Confidence            8999999999988765  799999999999999999999999999999999887 8999999998775 57889999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +|+|+++|+|++|.|++++|||||+|+||+++|++......  .......+.+....|+ +|+.+||||++++.||++++
T Consensus       150 sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl-~R~~~pedva~~v~fL~s~~  228 (245)
T d2ag5a1         150 TKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT-GRFATAEEIAMLCVYLASDE  228 (245)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT-SSCEEHHHHHHHHHHHHSGG
T ss_pred             HHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCC-CCCcCHHHHHHHHHHHhChh
Confidence            99999999999999999999999999999999998765432  2234445556667888 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      ++++|||+|.+|||++|
T Consensus       229 s~~iTG~~i~VDGG~sl  245 (245)
T d2ag5a1         229 SAYVTGNPVIIDGGWSL  245 (245)
T ss_dssp             GTTCCSCEEEECTTGGG
T ss_pred             hCCCcCceEEeCCCcCC
Confidence            99999999999999986

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-52  Score=342.12  Aligned_cols=238  Identities=23%  Similarity=0.319  Sum_probs=203.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +||++|||||++|||+++|+.|+++|++|++++|+.++..+...+...   ..++.++++|++|+++++++++++.+++|
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            699999999999999999999999999988888887776555544432   25789999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCCCchhhc
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++|+||||||+....          +|++.+++|+.+++++++.++|+|.+++  ..|+||++||..+..+.+....|++
T Consensus        82 ~iDilVnnAg~~~~~----------~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~a  151 (254)
T d2gdza1          82 RLDILVNNAGVNNEK----------NWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCA  151 (254)
T ss_dssp             CCCEEEECCCCCCSS----------SHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHH
T ss_pred             CcCeecccccccccc----------cchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHH
Confidence            999999999986543          5899999999999999999999998753  2489999999999999999999999


Q ss_pred             hHHHHHHHHHH--HHHHhCcCCceEEEeeCCcccCcccccccCCC----hHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          169 SKHAVIGLVRS--ASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP----ADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       169 sK~al~~~~~~--la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      ||+|+.+|+|+  ++.|++++|||||+|+||+++|+|........    ..+..+.+....|. +|+.+|||||++++||
T Consensus       152 sKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~r~~~pedvA~~v~fL  230 (254)
T d2gdza1         152 SKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKY-YGILDPPLIANGLITL  230 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHH-HCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCC-CCCcCHHHHHHHHHHH
Confidence            99999999997  78899999999999999999999986553211    11122233334456 7899999999999999


Q ss_pred             hCCCCCCeeccEEEecCeeecC
Q 041914          243 ACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      ++++  ++||++|.+|||+.++
T Consensus       231 ~s~~--~itG~~i~VdGG~~~~  250 (254)
T d2gdza1         231 IEDD--ALNGAIMKITTSKGIH  250 (254)
T ss_dssp             HHCT--TCSSCEEEEETTTEEE
T ss_pred             HcCC--CCCCCEEEECCCCeee
Confidence            9854  5999999999998874

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=7.7e-51  Score=329.72  Aligned_cols=228  Identities=22%  Similarity=0.305  Sum_probs=200.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc-------EEEEecCchhhHHHHHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR-------MIVIADIQDELGRQVATSIGV-GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~-------v~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +++|||||++|||+++|++|+++|++       |++..|+.++..+...+.... .++.++++|++|+++++++++++.+
T Consensus         2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~   81 (240)
T d2bd0a1           2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVE   81 (240)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHH
Confidence            57899999999999999999999998       666677665554443333332 4788999999999999999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                      +||++|+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.|++..|+
T Consensus        82 ~~g~iDilvnnAg~~~~~--~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~-~G~Ii~isS~~~~~~~~~~~~Y~  158 (240)
T d2bd0a1          82 RYGHIDCLVNNAGVGRFG--ALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQH-SGHIFFITSVAATKAFRHSSIYC  158 (240)
T ss_dssp             HTSCCSEEEECCCCCCCC--CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEECCGGGTSCCTTCHHHH
T ss_pred             HcCCcceeecccccccCC--ccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcC-CCceEEEechhhcCCCCCChHHH
Confidence            999999999999987665  899999999999999999999999999999999887 89999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCC
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDS  247 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~  247 (264)
                      +||+|+.+|+|+++.|++++|||||+|+||+++|+|.......              ...++.+|||||+.++||+++..
T Consensus       159 asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~~~~--------------~~~~~~~PedvA~~v~~l~s~~~  224 (240)
T d2bd0a1         159 MSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDDE--------------MQALMMMPEDIAAPVVQAYLQPS  224 (240)
T ss_dssp             HHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCST--------------TGGGSBCHHHHHHHHHHHHTSCT
T ss_pred             HHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhcCHh--------------hHhcCCCHHHHHHHHHHHHcCCc
Confidence            9999999999999999999999999999999999997543211              11567899999999999999888


Q ss_pred             CCeeccE-EEecCe
Q 041914          248 EFVTGHD-LVVDGG  260 (264)
Q Consensus       248 ~~~~G~~-i~~dgG  260 (264)
                      ++++|+. +..+||
T Consensus       225 ~~~~~~~~i~p~~G  238 (240)
T d2bd0a1         225 RTVVEEIILRPTSG  238 (240)
T ss_dssp             TEEEEEEEEEETTC
T ss_pred             cCccCCEEEEecCC
Confidence            8888874 557776

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=339.23  Aligned_cols=249  Identities=22%  Similarity=0.316  Sum_probs=217.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++..+...+...  ..++.++++|+++.++++++++.+.++
T Consensus        21 ~~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~  100 (294)
T d1w6ua_          21 NSFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKV  100 (294)
T ss_dssp             TTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhh
Confidence            589999999999999999999999999999999999887766554444332  357889999999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhc
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHM  168 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~  168 (264)
                      ++++|+||||||.....  ++.+.+.++|++.+.+|+.+.+.+++...+.+......+.+++++|..+..+.++...|++
T Consensus       101 ~g~iDilvnnAg~~~~~--~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~Ysa  178 (294)
T d1w6ua_         101 AGHPNIVINNAAGNFIS--PTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSAS  178 (294)
T ss_dssp             TCSCSEEEECCCCCCCS--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHH
T ss_pred             ccccchhhhhhhhcccc--ccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHH
Confidence            99999999999987665  8889999999999999999999999998888877654778999999999999999999999


Q ss_pred             hHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCC
Q 041914          169 SKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSE  248 (264)
Q Consensus       169 sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~  248 (264)
                      +|+|+.+|+|.+|.|++++|||||+|+||+++|++....... .++..+.+....|. +|+.+|||||++++||++++++
T Consensus       179 sKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~pl-~R~~~pediA~~v~fL~sd~s~  256 (294)
T d1w6ua_         179 AKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDP-TGTFEKEMIGRIPC-GRLGTVEELANLAAFLCSDYAS  256 (294)
T ss_dssp             HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCT-TSHHHHHHHTTCTT-SSCBCHHHHHHHHHHHTSGGGT
T ss_pred             HHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCC-cHHHHHHHhhcCCC-CCCCCHHHHHHHHHHHhCchhc
Confidence            999999999999999999999999999999999998765433 33445556677888 8999999999999999999999


Q ss_pred             CeeccEEEecCeeec
Q 041914          249 FVTGHDLVVDGGFLI  263 (264)
Q Consensus       249 ~~~G~~i~~dgG~~~  263 (264)
                      ++||++|.+|||+++
T Consensus       257 ~itG~~i~vDGG~~l  271 (294)
T d1w6ua_         257 WINGAVIKFDGGEEV  271 (294)
T ss_dssp             TCCSCEEEESTTHHH
T ss_pred             CCCCcEEEECCChhh
Confidence            999999999999864

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-50  Score=328.09  Aligned_cols=245  Identities=22%  Similarity=0.341  Sum_probs=207.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCCCHHHHHHHHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .|.+|+||++|||||++|||+++|+.|+++|++|+++.|+.++..+..++...   .+++.+++||++++++++++++++
T Consensus         4 ~M~~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~   83 (257)
T d1xg5a_           4 GMERWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAI   83 (257)
T ss_dssp             TCGGGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCCCCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHH
Confidence            35669999999999999999999999999999988888876655444433332   257899999999999999999999


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCC--CCC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCG--GKR  162 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~--~~~  162 (264)
                      .+++|+||+||||||.....  ++.+.+.++|++.+++|+.+++++++.++|.|++.+ ..|+||+++|..+...  .+.
T Consensus        84 ~~~~g~iD~lVnnAg~~~~~--~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~  161 (257)
T d1xg5a_          84 RSQHSGVDICINNAGLARPD--TLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSV  161 (257)
T ss_dssp             HHHHCCCSEEEECCCCCCCC--CTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGG
T ss_pred             HHhcCCCCEEEecccccCCC--ccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcc
Confidence            99999999999999987665  899999999999999999999999999999998754 2589999999998754  455


Q ss_pred             CchhhchHHHHHHHHHHHHHHh--CcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQL--GVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVL  240 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~--~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~  240 (264)
                      ...|+++|+|+.+|+|+++.|+  +++||+||+|+||+++|++.........+....    ..|. +++++|||||++++
T Consensus       162 ~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~----~~~~-~r~~~pedvA~~v~  236 (257)
T d1xg5a_         162 THFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA----TYEQ-MKCLKPEDVAEAVI  236 (257)
T ss_dssp             GHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH----HHC----CBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHh----cCCC-CCCcCHHHHHHHHH
Confidence            6779999999999999999998  788999999999999999987664433333222    3355 88999999999999


Q ss_pred             HHhCCCCCCeeccEEEecCe
Q 041914          241 FLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       241 ~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ||+++..+++|||++.-++|
T Consensus       237 fL~s~~a~~itG~i~i~~~g  256 (257)
T d1xg5a_         237 YVLSTPAHIQIGDIQMRPTG  256 (257)
T ss_dssp             HHHHSCTTEEEEEEEEEETT
T ss_pred             HHhCChhcCeECCEEEEeCC
Confidence            99999999999997555544

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-51  Score=342.32  Aligned_cols=233  Identities=23%  Similarity=0.362  Sum_probs=201.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch--------hhHHHHHhhhCCCcEEEEEecCCCHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD--------ELGRQVATSIGVGKCHYVHCDVTNECQVKAL   81 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~   81 (264)
                      +++|+||++|||||++|||+++|++|+++|++|++..+..+        ...+.+.++... ......+|++|.++++++
T Consensus         2 Pm~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~   80 (302)
T d1gz6a_           2 PLRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR-RGGKAVANYDSVEAGEKL   80 (302)
T ss_dssp             CCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH-TTCEEEEECCCGGGHHHH
T ss_pred             CcCcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh-cccccccccchHHHHHHH
Confidence            56799999999999999999999999999999888755332        222233333221 335678899999999999


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      ++++.+++|+||+||||||+....  ++.+.+.++|++++++|+.++++++|.++|+|++++ .|+||++||..+..+.+
T Consensus        81 v~~~~~~~G~iDiLVnNAGi~~~~--~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~-~G~IV~isS~~~~~~~~  157 (302)
T d1gz6a_          81 VKTALDTFGRIDVVVNNAGILRDR--SFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQN-YGRIIMTASASGIYGNF  157 (302)
T ss_dssp             HHHHHHHTSCCCEEEECCCCCCCC--CGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-CEEEEEECCHHHHHCCT
T ss_pred             HHHHHHHcCCCCEEEECCccCCCC--ChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCC-CcEEEEeCChhhcCCCC
Confidence            999999999999999999998765  899999999999999999999999999999999987 89999999999999999


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHH
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLF  241 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~  241 (264)
                      +...|++||+|+.+|+|+++.|++++|||||+|+||++.|++....   + ++.           .+.++|||||++++|
T Consensus       158 ~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~---~-~~~-----------~~~~~PedvA~~v~f  222 (302)
T d1gz6a_         158 GQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVM---P-EDL-----------VEALKPEYVAPLVLW  222 (302)
T ss_dssp             TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGS---C-HHH-----------HHHSCGGGTHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcC---c-Hhh-----------HhcCCHHHHHHHHHH
Confidence            9999999999999999999999999999999999999988765432   1 221           344589999999999


Q ss_pred             HhCCCCCCeeccEEEecCeee
Q 041914          242 LACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       242 l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      |+++.+ ++||++|.+|||+.
T Consensus       223 L~S~~a-~itG~~i~vdGG~~  242 (302)
T d1gz6a_         223 LCHESC-EENGGLFEVGAGWI  242 (302)
T ss_dssp             HTSTTC-CCCSCEEEEETTEE
T ss_pred             HcCCCc-CCCCcEEEeCCCce
Confidence            998654 78999999999985

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=100.00  E-value=2.7e-47  Score=317.04  Aligned_cols=241  Identities=24%  Similarity=0.273  Sum_probs=198.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEE-----------------EEecCCCH
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHY-----------------VHCDVTNE   75 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~-----------------~~~D~s~~   75 (264)
                      .++|||||++|||+++|++|+++|++|++..+++++..+.+.+.+.   ......                 +.+|+++.
T Consensus         3 pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~   82 (284)
T d1e7wa_           3 PVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLF   82 (284)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCH
Confidence            5899999999999999999999999988888887776665555442   123333                 45669999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHH--------------HHHhhHHHHHHHHHHHHHHHHHc
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFD--------------RLFAINVRGMAACVKHAARVMVE  141 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~n~~~~~~l~~~~l~~~~~  141 (264)
                      ++++++++++.+++|+||+||||||+..+.  ++.+.+.++|+              ..+.+|+.+++++.|.+.+.+..
T Consensus        83 ~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~  160 (284)
T d1e7wa_          83 TRCAELVAACYTHWGRCDVLVNNASSFYPT--PLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG  160 (284)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCCCCCC--CCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCEEEecCCccCCC--chhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhh
Confidence            999999999999999999999999987665  66666655554              57999999999999999987642


Q ss_pred             -----CCCCcEEEEecCCCCCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHH
Q 041914          142 -----GGVRGSIVCTASVAGSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVE  216 (264)
Q Consensus       142 -----~~~~~~iv~iss~~~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~  216 (264)
                           ++..++|++++|.....+.++...|+++|+|+++|+|.+|.|++++|||||+|+||++.+...      ..++..
T Consensus       161 ~~~~~~~~~~~ii~~~s~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~------~~~~~~  234 (284)
T d1e7wa_         161 TPAKHRGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDD------MPPAVW  234 (284)
T ss_dssp             SCGGGSCSCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGG------SCHHHH
T ss_pred             hHHHhcCCCCcccccccccccCCccceeeeccccccchhhhHHHHHHhCCcccccccccccccccccc------CCHHHH
Confidence                 222679999999999999999999999999999999999999999999999999998665432      124455


Q ss_pred             hhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          217 KLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       217 ~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      +.+....|+.+|+.+|||||++++||+|++++|+|||+|.+|||++|+
T Consensus       235 ~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~  282 (284)
T d1e7wa_         235 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT  282 (284)
T ss_dssp             HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence            556667776689999999999999999999999999999999999874

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=100.00  E-value=1e-47  Score=313.79  Aligned_cols=236  Identities=21%  Similarity=0.204  Sum_probs=195.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH--HHhhhCCCcEEEEEecCC-CHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ--VATSIGVGKCHYVHCDVT-NECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~s-~~~~~~~~~~~~~~   87 (264)
                      ++|+||++|||||++|||+++|++|+++|++|++++|+.++..+.  +.......++.++.+|++ +.++++++++++.+
T Consensus         1 m~l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (254)
T d1sbya1           1 MDLTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFD   80 (254)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHH
Confidence            469999999999999999999999999999999998887654322  223334458999999998 67899999999999


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC--CCcEEEEecCCCCCCCCCCCch
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG--VRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~--~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      ++++||+||||||...          .+.|++++++|+.+++++++.++|.|.+++  ..|+||+++|..+..+.+++..
T Consensus        81 ~~g~iDilvnnAG~~~----------~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~  150 (254)
T d1sbya1          81 QLKTVDILINGAGILD----------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPV  150 (254)
T ss_dssp             HHSCCCEEEECCCCCC----------TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHH
T ss_pred             HcCCCCEEEeCCCCCC----------HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHH
Confidence            9999999999999653          346999999999999999999999997642  3589999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+.+|+++++.|++++|||||+|+||+++|+|.+....  ..+....+ ...+..++..+||++|+.++++++.
T Consensus       151 Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~e~va~~~~~~~~~  227 (254)
T d1sbya1         151 YSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNS--WLDVEPRV-AELLLSHPTQTSEQCGQNFVKAIEA  227 (254)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCC--GGGSCTTH-HHHHTTSCCEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCcccccccc--chhHHHHH-HhccccCCCCCHHHHHHHHHHhhhC
Confidence            99999999999999999999999999999999999998765421  11111111 1112225567999999999888753


Q ss_pred             CCCCeeccEEEecCeee
Q 041914          246 DSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~  262 (264)
                         +.||++|.+|||++
T Consensus       228 ---~~tG~vi~vdgG~l  241 (254)
T d1sbya1         228 ---NKNGAIWKLDLGTL  241 (254)
T ss_dssp             ---CCTTCEEEEETTEE
T ss_pred             ---CCCCCEEEECCCEe
Confidence               35999999999975

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-47  Score=314.83  Aligned_cols=242  Identities=19%  Similarity=0.181  Sum_probs=203.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHH---cCCcEEEEecCchhhHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFAD---HGARMIVIADIQDELGRQVATSI---GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~---~g~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .|+||++|||||++|||+++|++|++   +|++|++++|+.+++.+...+..   ...++.+++||++++++++++++.+
T Consensus         3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~   82 (259)
T d1oaaa_           3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV   82 (259)
T ss_dssp             CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHH
Confidence            58999999999999999999999997   79999998887776544333322   2357899999999999999999998


Q ss_pred             HHh----cCCccEEEEcCCCCCCC-CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEecCCCCCCC
Q 041914           86 VQN----YGQLDIMFSNAGILSSS-DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTASVAGSCG  159 (264)
Q Consensus        86 ~~~----~~~id~lv~~ag~~~~~-~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~iss~~~~~~  159 (264)
                      .+.    ++.+|++|||||...+. ..++.+.++++|++++++|+.++++++|.++|+|++++ ..++||++||..+..+
T Consensus        83 ~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~  162 (259)
T d1oaaa_          83 RELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQP  162 (259)
T ss_dssp             HHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSC
T ss_pred             HHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCC
Confidence            773    45799999999986543 34788999999999999999999999999999998754 2579999999999999


Q ss_pred             CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC-ChHHHHhhcCCCCCCCCCCCChHHHHHH
Q 041914          160 GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM-PADEVEKLFEPQTPLEGVVLRAGHVADA  238 (264)
Q Consensus       160 ~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~edva~~  238 (264)
                      .+++..|++||+|+++|+|+++.|  ++|||||+|+||+++|+|....... ..++..+.+....|. +++.+|+|+|+.
T Consensus       163 ~~~~~~Y~asKaal~~lt~~la~e--~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~-~r~~~p~evA~~  239 (259)
T d1oaaa_         163 YKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKSD-GALVDCGTSAQK  239 (259)
T ss_dssp             CTTCHHHHHHHHHHHHHHHHHHHH--CTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHHT-TCSBCHHHHHHH
T ss_pred             CccchHHHHHHHHHHHHHHHHHhC--CCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcCCC-CCCCCHHHHHHH
Confidence            999999999999999999999999  5799999999999999987644311 123333334333455 788999999999


Q ss_pred             HHHHhCCCCCCeeccEEEe
Q 041914          239 VLFLACRDSEFVTGHDLVV  257 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~  257 (264)
                      +++|+++ ++++||++|++
T Consensus       240 i~~ll~~-~s~~TG~~idv  257 (259)
T d1oaaa_         240 LLGLLQK-DTFQSGAHVDF  257 (259)
T ss_dssp             HHHHHHH-CCSCTTEEEET
T ss_pred             HHHHhhh-ccCCCCCeEEe
Confidence            9999975 57999999986

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=4.8e-47  Score=311.37  Aligned_cols=246  Identities=20%  Similarity=0.252  Sum_probs=211.2

Q ss_pred             cCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .|+||++|||||++  |||+++|+.|+++|++|++.+|+++ ..+...+.. ..+....+..|+++..++...++++.+.
T Consensus         2 ~L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (258)
T d1qsga_           2 FLSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDK-LKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKV   80 (258)
T ss_dssp             TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred             cCCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhc
Confidence            48999999999998  8999999999999999888888754 333333333 2346778899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCC---CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCch
Q 041914           89 YGQLDIMFSNAGILSSSD---QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTD  165 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~---~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~  165 (264)
                      ++++|++|||++......   ........+.|...+++|+.+.+.+.+.+.|.|++   .+.|+++||..+..+.|....
T Consensus        81 ~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~Ii~iss~~~~~~~~~~~~  157 (258)
T d1qsga_          81 WPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNP---GSALLTLSYLGAERAIPNYNV  157 (258)
T ss_dssp             CSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTTTH
T ss_pred             ccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEecchhhccCCCCcHH
Confidence            999999999998865431   13345677889999999999999999999998865   458999999999999999999


Q ss_pred             hhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          166 YHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       166 y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      |++||+|+++|+|.+|.|++++|||||+|+||+++|++....  ...+...+......|. +|+.+|||||+++.||+++
T Consensus       158 Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~--~~~~~~~~~~~~~~pl-~R~~~peeia~~v~fL~s~  234 (258)
T d1qsga_         158 MGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGI--KDFRKMLAHCEAVTPI-RRTVTIEDVGNSAAFLCSD  234 (258)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGS--TTHHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHTSG
T ss_pred             HHHHHHHHHHHHHHHHHHhCccCceeeccccccccccccccc--chhhhHHHHHHhCCCC-CCCcCHHHHHHHHHHHhCc
Confidence            999999999999999999999999999999999999997654  2334444555566788 8999999999999999999


Q ss_pred             CCCCeeccEEEecCeeecC
Q 041914          246 DSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG~~~~  264 (264)
                      +++++||++|.+|||++|.
T Consensus       235 ~s~~itG~~i~vDGG~~i~  253 (258)
T d1qsga_         235 LSAGISGEVVHVDGGFSIA  253 (258)
T ss_dssp             GGTTCCSCEEEESTTGGGB
T ss_pred             hhcCccCceEEECcCHHHh
Confidence            9999999999999999873

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-46  Score=306.11  Aligned_cols=238  Identities=27%  Similarity=0.410  Sum_probs=202.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +|+||++|||||++|||+++|++|+++|++|++++|+.++..+..++. . .......+|+.+.+.++....++...++.
T Consensus         2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (248)
T d2o23a1           2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL-G-NNCVFAPADVTSEKDVQTALALAKGKFGR   79 (248)
T ss_dssp             CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH-C-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh-C-CCccccccccccccccccccccccccccc
Confidence            689999999999999999999999999999998888877765544433 3 36788999999999999999999999999


Q ss_pred             ccEEEEcCCCCCCCC----CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcC-----CCCcEEEEecCCCCCCCCCC
Q 041914           92 LDIMFSNAGILSSSD----QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEG-----GVRGSIVCTASVAGSCGGKR  162 (264)
Q Consensus        92 id~lv~~ag~~~~~~----~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~-----~~~~~iv~iss~~~~~~~~~  162 (264)
                      +|.+++|+++.....    .++.+.+.++|++++++|+.++++++|.++|+|..+     ...|+||++||..+..+.++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~  159 (248)
T d2o23a1          80 VDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVG  159 (248)
T ss_dssp             CCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTT
T ss_pred             ccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCC
Confidence            999999998765442    366778999999999999999999999999998754     12689999999999999999


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHH
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFL  242 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l  242 (264)
                      +..|++||+|+++|+|+++.|++++|||||+|+||+++|+|.....    ++..+.+....|+.+|+.+|||||++++||
T Consensus       160 ~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~----~~~~~~~~~~~pl~~R~g~peevA~~v~fL  235 (248)
T d2o23a1         160 QAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLP----EKVCNFLASQVPFPSRLGDPAEYAHLVQAI  235 (248)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC--------------CHHHHTCSSSCSCBCHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCC----HHHHHHHHhcCCCCCCCcCHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999976542    233344445667668999999999999999


Q ss_pred             hCCCCCCeeccEEEe
Q 041914          243 ACRDSEFVTGHDLVV  257 (264)
Q Consensus       243 ~s~~~~~~~G~~i~~  257 (264)
                      ++  ++|+|||+|.|
T Consensus       236 ~s--~~~itGq~I~v  248 (248)
T d2o23a1         236 IE--NPFLNGEVIRL  248 (248)
T ss_dssp             HH--CTTCCSCEEEE
T ss_pred             Hh--CCCCCceEeEC
Confidence            96  67999999976

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=4.6e-47  Score=321.51  Aligned_cols=246  Identities=17%  Similarity=0.175  Sum_probs=201.9

Q ss_pred             CCcEEEEeC--CCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-------------CcEEEEE---------
Q 041914           14 EGKVAIITG--GASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-------------GKCHYVH---------   69 (264)
Q Consensus        14 ~~k~vlItG--as~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~---------   69 (264)
                      .+|++||||  +++|||+++|++|+++|++|++..+...............             .......         
T Consensus         1 n~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (329)
T d1uh5a_           1 NEDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN   80 (329)
T ss_dssp             CCCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred             CCcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence            479999999  6689999999999999999888777655443322211110             1122333         


Q ss_pred             -----------ecCCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHH
Q 041914           70 -----------CDVTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARV  138 (264)
Q Consensus        70 -----------~D~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~  138 (264)
                                 +|+++.++++++++++.+.||+||+||||+|.......++.+.+.++|++.+++|+++++.++|+++|+
T Consensus        81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~  160 (329)
T d1uh5a_          81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI  160 (329)
T ss_dssp             GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred             ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence                       366688889999999999999999999999987654458899999999999999999999999999999


Q ss_pred             HHcCCCCcEEEEecCCCCCCCCCC-CchhhchHHHHHHHHHHHHHHhCc-CCceEEEeeCCcccCccccccc--------
Q 041914          139 MVEGGVRGSIVCTASVAGSCGGKR-RTDYHMSKHAVIGLVRSASVQLGV-HGIRVNCVSPHGLATPLTCHAY--------  208 (264)
Q Consensus       139 ~~~~~~~~~iv~iss~~~~~~~~~-~~~y~~sK~al~~~~~~la~e~~~-~~i~v~~v~pG~v~t~~~~~~~--------  208 (264)
                      |++   .|+||++||..+..+.|+ ...|+++|+|+++|+|.+|.||++ +|||||+|+||+++|++.+...        
T Consensus       161 m~~---~GsIv~iss~~~~~~~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~~~  237 (329)
T d1uh5a_         161 MKP---QSSIISLTYHASQKVVPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTYEN  237 (329)
T ss_dssp             EEE---EEEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC--------
T ss_pred             ccc---ccccccceeehhcccccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhhhh
Confidence            965   579999999999988876 567999999999999999999986 6999999999999995433211        


Q ss_pred             ---------------------------------CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEE
Q 041914          209 ---------------------------------GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDL  255 (264)
Q Consensus       209 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i  255 (264)
                                                       ....++..+.+....|+ +|+.+|||||++++||+|+.++++|||+|
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl-~R~~~pedvA~~v~fLaSd~s~~iTGq~i  316 (329)
T d1uh5a_         238 NTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPL-RQKLLSTDIGSVASFLLSRESRAITGQTI  316 (329)
T ss_dssp             ----------------------------------CHHHHHHHHHHHHSSS-CSCCCHHHHHHHHHHHHSGGGTTCCSCEE
T ss_pred             hhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCC-CCCcCHHHHHHHHHHHhCchhCCccCCeE
Confidence                                             11234445556666788 89999999999999999999999999999


Q ss_pred             EecCeeec
Q 041914          256 VVDGGFLI  263 (264)
Q Consensus       256 ~~dgG~~~  263 (264)
                      .+|||+++
T Consensus       317 ~VDGG~~~  324 (329)
T d1uh5a_         317 YVDNGLNI  324 (329)
T ss_dssp             EESTTGGG
T ss_pred             EECCCccc
Confidence            99999976

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-46  Score=301.88  Aligned_cols=218  Identities=23%  Similarity=0.355  Sum_probs=190.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .+|.||++|||||++|||+++|++|+++|++|++++|+.+++.+..++... ..+++++.||++|.++++++++++.+++
T Consensus         3 ~~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~   82 (244)
T d1yb1a_           3 KSVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI   82 (244)
T ss_dssp             CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred             CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            358999999999999999999999999999998888877666544443332 2479999999999999999999999999


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      |++|+||||||.....  ++.+.+.+.|++++++|+.+++++++.++|.|++++ .|+||++||..+..+.|++..|++|
T Consensus        83 g~idilinnag~~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~-~G~Iv~isS~~~~~~~~~~~~Y~as  159 (244)
T d1yb1a_          83 GDVSILVNNAGVVYTS--DLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNN-HGHIVTVASAAGHVSVPFLLAYCSS  159 (244)
T ss_dssp             CCCSEEEECCCCCCCC--CCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEEECCCC-CCCHHHHHHHHHH
T ss_pred             CCCceeEeeccccccc--cccccchhHHHhhcceeeeccHHHHHHHhhhHHhcC-CceEEEeecchhcCCCCCcHHHHHH
Confidence            9999999999998766  788899999999999999999999999999999988 8999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCc---CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          170 KHAVIGLVRSASVQLGV---HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       170 K~al~~~~~~la~e~~~---~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      |+|+.+|+++++.|+++   +||+||+|+||+++|+|.+..    ..+          . .+..+|||+++.++..+..+
T Consensus       160 Kaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~~----~~~----------~-~~~~~pe~va~~i~~~~~~~  224 (244)
T d1yb1a_         160 KFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP----STS----------L-GPTLEPEEVVNRLMHGILTE  224 (244)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTCT----HHH----------H-CCCCCHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhCc----Ccc----------c-cCCCCHHHHHHHHHHHHhcC
Confidence            99999999999999876   589999999999999987532    111          1 45568999999998866433

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=5.7e-46  Score=310.90  Aligned_cols=249  Identities=20%  Similarity=0.208  Sum_probs=200.7

Q ss_pred             ccccCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---------C----CcEEEEEec--
Q 041914            9 AKNKLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIG---------V----GKCHYVHCD--   71 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D--   71 (264)
                      ++++|+||++|||||++  |||+++|++|+++|++|++.+|..............         .    ......++|  
T Consensus         2 ~~~~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (297)
T d1d7oa_           2 LPIDLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAV   81 (297)
T ss_dssp             CCCCCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTT
T ss_pred             CCcCCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhh
Confidence            57789999999999876  999999999999999988877765432222111110         0    111233443  


Q ss_pred             ------------------CCCHHHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHH
Q 041914           72 ------------------VTNECQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVK  133 (264)
Q Consensus        72 ------------------~s~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~  133 (264)
                                        .++..+++++++++.++||+||+||||||.......++.+.+.++|++.+++|+.+++.+++
T Consensus        82 ~~~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~  161 (297)
T d1d7oa_          82 FDNPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLS  161 (297)
T ss_dssp             CCSGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHH
T ss_pred             ccccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhh
Confidence                              34556778999999999999999999999876544588999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcEEEEecCCCCC-CCCCCCchhhchHHHHHHHHHHHHHHhC-cCCceEEEeeCCcccCcccccccCCC
Q 041914          134 HAARVMVEGGVRGSIVCTASVAGS-CGGKRRTDYHMSKHAVIGLVRSASVQLG-VHGIRVNCVSPHGLATPLTCHAYGMP  211 (264)
Q Consensus       134 ~~l~~~~~~~~~~~iv~iss~~~~-~~~~~~~~y~~sK~al~~~~~~la~e~~-~~~i~v~~v~pG~v~t~~~~~~~~~~  211 (264)
                      +++|.|.++   +.++++++.... ...+....|+++|+++..+++.++.|++ ++|||||+|+||++.|++....  ..
T Consensus       162 ~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~--~~  236 (297)
T d1d7oa_         162 HFLPIMNPG---GASISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAI--GF  236 (297)
T ss_dssp             HHGGGEEEE---EEEEEEECGGGTSCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCC--SH
T ss_pred             HHHHHhhcC---CcceeeeehhhcccccccccceecccccccccccccchhccccceEEecccccccccchhhhhc--cC
Confidence            999988774   466666665544 3457778899999999999999999996 5799999999999999987643  12


Q ss_pred             hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          212 ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      .++..+......|+ +|+.+|||||++++||+|+.++|+|||+|.+|||+++
T Consensus       237 ~~~~~~~~~~~~Pl-gR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~s~  287 (297)
T d1d7oa_         237 IDTMIEYSYNNAPI-QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGLNS  287 (297)
T ss_dssp             HHHHHHHHHHHSSS-CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred             CHHHHHHHHhCCCC-CCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCHhh
Confidence            34555566667788 8999999999999999999999999999999999874

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.3e-44  Score=293.76  Aligned_cols=231  Identities=29%  Similarity=0.364  Sum_probs=195.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +|++|||||++|||+++|++|+++|++|++++|+.+..           +...+++|+++......+......... .+.
T Consensus         1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~-----------~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~   68 (241)
T d1uaya_           1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE-----------DLIYVEGDVTREEDVRRAVARAQEEAP-LFA   68 (241)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS-----------SSEEEECCTTCHHHHHHHHHHHHHHSC-EEE
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc-----------cceEeeccccchhhhHHHHHhhhcccc-ccc
Confidence            59999999999999999999999999998888876532           456789999999999999988877654 455


Q ss_pred             EEEcCCCCCCC--CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHH------cCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           95 MFSNAGILSSS--DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMV------EGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        95 lv~~ag~~~~~--~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~------~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++++.....  .......+.+.|++.+++|+.+++.+++.+.+.+.      +++ .|+||++||..+..+.++...|
T Consensus        69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~-~G~Ii~isS~~~~~~~~~~~~Y  147 (241)
T d1uaya_          69 VVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQ-RGVIVNTASVAAFEGQIGQAAY  147 (241)
T ss_dssp             EEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSC-SEEEEEECCTHHHHCCTTCHHH
T ss_pred             hhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccC-ceeeeeecchhhccCCCCchhh
Confidence            66666544332  23555678899999999999999999999999854      334 7899999999999999999999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++|+|+.+|+|++|.|++++|||||+|+||+++|++.....    +...+.+....|..+|+.+|||||++++||++  
T Consensus       148 ~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~----~~~~~~~~~~~~~~~R~g~pedvA~~v~fL~s--  221 (241)
T d1uaya_         148 AASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLP----EKAKASLAAQVPFPPRLGRPEEYAALVLHILE--  221 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSC----HHHHHHHHTTCCSSCSCCCHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhh----hhHHHHHHhcCCCCCCCcCHHHHHHHHHHHHh--
Confidence            999999999999999999999999999999999999986542    23333344455655899999999999999997  


Q ss_pred             CCCeeccEEEecCeeecC
Q 041914          247 SEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~~  264 (264)
                      ++|+|||+|.+|||++|.
T Consensus       222 ~~~iTG~~i~VDGG~~m~  239 (241)
T d1uaya_         222 NPMLNGEVVRLDGALRMA  239 (241)
T ss_dssp             CTTCCSCEEEESTTCCCC
T ss_pred             CCCCCCCEEEECCcccCC
Confidence            579999999999999873

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-45  Score=303.71  Aligned_cols=234  Identities=22%  Similarity=0.253  Sum_probs=184.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe---cCchhh--HHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIA---DIQDEL--GRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~---~~~~~~--~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .|++|||||++|||+++|+.|+++|++|+.+.   |+.+..  ..+..+.+  ..+++.++.||++|.++++++++++.+
T Consensus         2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~   81 (285)
T d1jtva_           2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTE   81 (285)
T ss_dssp             CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTT
T ss_pred             CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccc
Confidence            58899999999999999999999999866554   322222  12222222  235899999999999999999988753


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                        +.+|+||||+|.....  ++.+.+.++|++++++|+.|++++++.++|+|++++ .|+||++||..+..+.|+...|+
T Consensus        82 --g~idilvnnag~~~~~--~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~-~G~Iv~isS~~g~~~~~~~~~Y~  156 (285)
T d1jtva_          82 --GRVDVLVCNAGLGLLG--PLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRG-SGRVLVTGSVGGLMGLPFNDVYC  156 (285)
T ss_dssp             --SCCSEEEECCCCCCCS--CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEEEEGGGTSCCTTCHHHH
T ss_pred             --cchhhhhhcccccccc--cccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcC-CCceEEEechhhcCCCCCchHHH
Confidence              7899999999988765  889999999999999999999999999999999887 89999999999999999999999


Q ss_pred             chHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChH--------HHH---hhc--CCCCCCCCCCCChHH
Q 041914          168 MSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPAD--------EVE---KLF--EPQTPLEGVVLRAGH  234 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~--------~~~---~~~--~~~~~~~~~~~~~ed  234 (264)
                      +||+|+++|+++++.|++++||+||+|+||+++|+|.......+.+        ...   +..  ....+. ++..+|||
T Consensus       157 asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Pee  235 (285)
T d1jtva_         157 ASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFR-EAAQNPEE  235 (285)
T ss_dssp             HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHH-HHCBCHHH
T ss_pred             HHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhc-ccCCCHHH
Confidence            9999999999999999999999999999999999998765432111        000   000  001122 45779999


Q ss_pred             HHHHHHHHhCCC---CCCeeccE
Q 041914          235 VADAVLFLACRD---SEFVTGHD  254 (264)
Q Consensus       235 va~~~~~l~s~~---~~~~~G~~  254 (264)
                      ||+++++++...   .+|++|+.
T Consensus       236 VA~~v~~~~~~~~p~~ry~~g~~  258 (285)
T d1jtva_         236 VAEVFLTALRAPKPTLRYFTTER  258 (285)
T ss_dssp             HHHHHHHHHHCSSCCSEEESCST
T ss_pred             HHHHHHHHHhCCCCCeEEecHHH
Confidence            999999998543   45777764

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=100.00  E-value=1.2e-43  Score=292.12  Aligned_cols=243  Identities=26%  Similarity=0.371  Sum_probs=199.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC---CCcEEEEEecCC----CHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG---VGKCHYVHCDVT----NECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~---~~~~~~~~~D~s----~~~~~~~~~~~~~~~   88 (264)
                      .++|||||++|||+++|++|+++|++|++++|+.++..+.+.+++.   ..+...+++|..    ..+.+.++++++.++
T Consensus         2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (266)
T d1mxha_           2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA   81 (266)
T ss_dssp             CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence            4899999999999999999999999999999998876555544442   246667776654    367888999999999


Q ss_pred             cCCccEEEEcCCCCCCCCC---------CccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC----CCcEEEEecCCC
Q 041914           89 YGQLDIMFSNAGILSSSDQ---------TVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG----VRGSIVCTASVA  155 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~---------~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~----~~~~iv~iss~~  155 (264)
                      +|++|+||||||+..+...         ...+...+.+...+..|+.+.+...+...+.+....    ..+.++++++..
T Consensus        82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (266)
T d1mxha_          82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM  161 (266)
T ss_dssp             HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred             hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence            9999999999998765411         122334566778899999999999998888776532    256889999999


Q ss_pred             CCCCCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHH
Q 041914          156 GSCGGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHV  235 (264)
Q Consensus       156 ~~~~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edv  235 (264)
                      +..+.+++..|++||+|+++|+|++|.|++++|||||+|+||+++|++..      .++..+.+....|..+++.+||||
T Consensus       162 ~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~------~~~~~~~~~~~~pl~r~~~~peev  235 (266)
T d1mxha_         162 TDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM------PQETQEEYRRKVPLGQSEASAAQI  235 (266)
T ss_dssp             GGSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS------CHHHHHHHHTTCTTTSCCBCHHHH
T ss_pred             ccccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccC------CHHHHHHHHhcCCCCCCCCCHHHH
Confidence            99999999999999999999999999999999999999999999998653      244555666778885566899999


Q ss_pred             HHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          236 ADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       236 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |++++||+++++.++||++|.+|||++|.
T Consensus       236 a~~v~fL~s~~s~~itG~~i~vDGG~~l~  264 (266)
T d1mxha_         236 ADAIAFLVSKDAGYITGTTLKVDGGLILA  264 (266)
T ss_dssp             HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred             HHHHHHHhCchhCCccCCeEEECccHhhh
Confidence            99999999999999999999999999874

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=100.00  E-value=5.6e-44  Score=294.50  Aligned_cols=248  Identities=20%  Similarity=0.224  Sum_probs=207.8

Q ss_pred             cCCCcEEEEeCC--CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGG--ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGa--s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      -|+||++|||||  ++|||+++|++|+++|++|++++|+.++..+.+.+... .+...++||+++++++..+++.+.+.+
T Consensus         3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~-~~~~~~~~dv~~~~~~~~~~~~v~~~~   81 (268)
T d2h7ma1           3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLP-AKAPLLELDVQNEEHLASLAGRVTEAI   81 (268)
T ss_dssp             TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSS-SCCCEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcC-CceeeEeeecccccccccccchhhhcc
Confidence            378999999994  57999999999999999999888887776666665544 356788999999999999999998765


Q ss_pred             ---CCccEEEEcCCCCCCC---CCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC
Q 041914           90 ---GQLDIMFSNAGILSSS---DQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR  163 (264)
Q Consensus        90 ---~~id~lv~~ag~~~~~---~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~  163 (264)
                         +.+|++|||+|.....   ..++.+.+.++|.+.+++|+.+.+...+.+.+.+.    .+.+++++|.....+.|.+
T Consensus        82 ~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~s~~~~~~~p~~  157 (268)
T d2h7ma1          82 GAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMN----PGGSIVGMDFDPSRAMPAY  157 (268)
T ss_dssp             CTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE----EEEEEEEEECCCSSCCTTT
T ss_pred             ccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhcc----cccccccccccccccCccc
Confidence               6799999999976432   23677899999999999999999999998876543    3456677777788888999


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--------hHHHHhhcCCCCCCCCCCCChHHH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--------ADEVEKLFEPQTPLEGVVLRAGHV  235 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~edv  235 (264)
                      ..|+++|+|+.+|+|+++.|++++|||||+|+||++.|++........        .+...+......|+.+++.+|+||
T Consensus       158 ~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~rr~~~p~dv  237 (268)
T d2h7ma1         158 NWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIGWNMKDATPV  237 (268)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTCCCTTCCHHH
T ss_pred             chhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCCCCCCCHHHH
Confidence            999999999999999999999999999999999999999876544322        122334445567875679999999


Q ss_pred             HHHHHHHhCCCCCCeeccEEEecCeeecC
Q 041914          236 ADAVLFLACRDSEFVTGHDLVVDGGFLIR  264 (264)
Q Consensus       236 a~~~~~l~s~~~~~~~G~~i~~dgG~~~~  264 (264)
                      |+++.||+|+..+++||++|.+|||++.+
T Consensus       238 a~~v~fL~Sd~a~~iTG~~i~vDGG~~~~  266 (268)
T d2h7ma1         238 AKTVCALLSDWLPATTGDIIYADGGAHTQ  266 (268)
T ss_dssp             HHHHHHHHSSSCTTCCSEEEEESTTGGGC
T ss_pred             HHHHHHHhCchhcCccCCEEEECcCcccc
Confidence            99999999999999999999999999754

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=100.00  E-value=9.9e-44  Score=293.98  Aligned_cols=245  Identities=22%  Similarity=0.253  Sum_probs=194.9

Q ss_pred             cCCCcEEEEeCCCC--hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           12 KLEGKVAIITGGAS--GIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        12 ~l~~k~vlItGas~--giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .|+||++|||||+|  |||+++|++|+++|++|++++|+++ ..+.+.+... .....++.+|+++.++++++++++.+.
T Consensus         2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~-~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~   80 (274)
T d2pd4a1           2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKD   80 (274)
T ss_dssp             TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred             cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHH
Confidence            48999999999765  9999999999999999888888743 3333333222 235678899999999999999999999


Q ss_pred             cCCccEEEEcCCCCCCCC--CCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           89 YGQLDIMFSNAGILSSSD--QTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      ++++|++|||+|......  ....+..+..+...+.++..+.+...+.+.+.++.   .+.|+++++.....+.+....|
T Consensus        81 ~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~~~~~~~~~~~~~y  157 (274)
T d2pd4a1          81 LGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNN---GASVLTLSYLGSTKYMAHYNVM  157 (274)
T ss_dssp             TSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEEECGGGTSBCTTCHHH
T ss_pred             cCCCCeEEeecccccccccccccccccchhhhhhhcccccccccccccccccccc---Ccceeeecccccccccccchhh
Confidence            999999999999865431  23344555566666666666555555555443322   3467777777778888888999


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      +++|+|+.+|+|+++.|++++|||||+|+||++.|++.....  ..++.........|. +|+.+|||||++++||+|++
T Consensus       158 ~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~--~~~~~~~~~~~~~p~-~r~~~pedIA~~v~fL~S~~  234 (274)
T d2pd4a1         158 GLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIA--DFRMILKWNEINAPL-RKNVSLEEVGNAGMYLLSSL  234 (274)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGST--THHHHHHHHHHHSTT-SSCCCHHHHHHHHHHHHSGG
T ss_pred             hHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccC--chHHHHHHHhhhhhc-cCCcCHHHHHHHHHHHhChh
Confidence            999999999999999999999999999999999999876542  334444444455666 89999999999999999999


Q ss_pred             CCCeeccEEEecCeeec
Q 041914          247 SEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       247 ~~~~~G~~i~~dgG~~~  263 (264)
                      .+++|||+|.+|||+++
T Consensus       235 s~~itG~~i~vDGG~~~  251 (274)
T d2pd4a1         235 SSGVSGEVHFVDAGYHV  251 (274)
T ss_dssp             GTTCCSCEEEESTTGGG
T ss_pred             hCCCcCceEEECCChhh
Confidence            99999999999999975

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=100.00  E-value=9.5e-43  Score=283.88  Aligned_cols=224  Identities=18%  Similarity=0.187  Sum_probs=182.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHH---HcCCcEEEEecCchhhHHHHHhhh-CCCcEEEEEecCCCHHHHHHHHHHHHH--hc
Q 041914           16 KVAIITGGASGIGETTARLFA---DHGARMIVIADIQDELGRQVATSI-GVGKCHYVHCDVTNECQVKALVDSTVQ--NY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~---~~g~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~   89 (264)
                      |+||||||++|||+++|++|+   ++|++|++.+|+.++..+ +++.. ...++.+++||++|+++++++++++++  ++
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   81 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKE-LEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD   81 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHH-HHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHH-HHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence            789999999999999999996   579999999988776543 33332 335899999999999999999999864  67


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC----------CCcEEEEecCCCCCC-
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG----------VRGSIVCTASVAGSC-  158 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~----------~~~~iv~iss~~~~~-  158 (264)
                      +++|+||||||+.... .++.+.+.++|++++++|+.+++.+++.++|+|+++.          ..+++|+++|..+.. 
T Consensus        82 ~~iDiLvnNAg~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~  160 (248)
T d1snya_          82 QGLNVLFNNAGIAPKS-ARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQ  160 (248)
T ss_dssp             GCCSEEEECCCCCCCC-CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCST
T ss_pred             CCcceEEeeccccccC-cccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccC
Confidence            8999999999987654 3688899999999999999999999999999998641          258999999998764 


Q ss_pred             --CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHH
Q 041914          159 --GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVA  236 (264)
Q Consensus       159 --~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva  236 (264)
                        +.+++..|++||+|+.+|+++++.|++++||+||+|+||+++|+|.....               |.     ++++.+
T Consensus       161 ~~~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~m~~~~~---------------~~-----~~~~~~  220 (248)
T d1snya_         161 GNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSSA---------------PL-----DVPTST  220 (248)
T ss_dssp             TCCSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTTC---------------SB-----CHHHHH
T ss_pred             CCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCCcccccC---------------CC-----CchHHH
Confidence              45667899999999999999999999999999999999999999875321               11     233334


Q ss_pred             HHHHHHhCCCCCCeeccEEEecCee
Q 041914          237 DAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       237 ~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +.++.++.......+|+.|++||+.
T Consensus       221 ~~i~~~i~~l~~~~tG~~i~~dG~~  245 (248)
T d1snya_         221 GQIVQTISKLGEKQNGGFVNYDGTP  245 (248)
T ss_dssp             HHHHHHHHHCCGGGTTCEECTTSCB
T ss_pred             HHHHHHHHhcCccCCCcEEEECCeE
Confidence            4444444334445689999999974

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=9.4e-43  Score=281.74  Aligned_cols=218  Identities=16%  Similarity=0.159  Sum_probs=187.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      +||++|||||++|||++++++|+++|++|+++.+...+.         ......+.+|.++.++.+.+.+++.+.+  ++
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEE---------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQK   71 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTT---------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc---------ccccceeecccCcHHHHHHHHHHHHHHhCCCC
Confidence            589999999999999999999999999988887765432         1245667888998999998888887765  47


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKH  171 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~  171 (264)
                      +|+||||||..... .++.+.+.++|++++++|+.+++++++.++|+|++   .|+||++||..+..+.+.+..|++||+
T Consensus        72 iD~lInnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~G~Iv~isS~~~~~~~~~~~~Y~asKa  147 (236)
T d1dhra_          72 VDAILCVAGGWAGG-NAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKE---GGLLTLAGAKAALDGTPGMIGYGMAKG  147 (236)
T ss_dssp             EEEEEECCCCCCCB-CTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHH
T ss_pred             ceEEEECCcccccc-cchhcCCHHHHHHHHHHcchHHHHHHHHHHHhccc---ccceeEEccHHHcCCccCCcccHHHHH
Confidence            99999999976543 35667788999999999999999999999999975   589999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          172 AVIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       172 al~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |+++|+|+++.|++  ++||+||+|+||+++|+|.+....            ..+. .++.+|||+++.+.+|+++...+
T Consensus       148 al~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~~~------------~~~~-~~~~~pe~va~~~~~l~s~~~~~  214 (236)
T d1dhra_         148 AVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSMP------------EADF-SSWTPLEFLVETFHDWITGNKRP  214 (236)
T ss_dssp             HHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHST------------TSCG-GGSEEHHHHHHHHHHHHTTTTCC
T ss_pred             HHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhhCc------------cchh-hcCCCHHHHHHHHHHHhCCCccC
Confidence            99999999999998  579999999999999998654321            1122 56778999999999999999999


Q ss_pred             eeccEEEe
Q 041914          250 VTGHDLVV  257 (264)
Q Consensus       250 ~~G~~i~~  257 (264)
                      ++|+.|.+
T Consensus       215 i~G~~i~v  222 (236)
T d1dhra_         215 NSGSLIQV  222 (236)
T ss_dssp             CTTCEEEE
T ss_pred             CCCCeEEE
Confidence            99987765

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-42  Score=286.16  Aligned_cols=219  Identities=21%  Similarity=0.219  Sum_probs=184.1

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +++|||||++|||+++|++|+++ |++|++..|+.++..+..++... ..++.+++||++|.++++++++++.+++++||
T Consensus         4 rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iD   83 (275)
T d1wmaa1           4 HVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLD   83 (275)
T ss_dssp             CEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred             eEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcE
Confidence            55699999999999999999986 89988888887766554444332 34788999999999999999999999999999


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------------  158 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------------  158 (264)
                      +||||||+....  +..+.+.++|++++++|+++++++++.++|+|++   .|+||+++|..+..               
T Consensus        84 iLVnNAGi~~~~--~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~---~g~ivnisS~~~~~~~~~~~~y~~~k~~~  158 (275)
T d1wmaa1          84 VLVNNAGIAFKV--ADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKP---QGRVVNVSSIMSVRALKSCSPELQQKFRS  158 (275)
T ss_dssp             EEEECCCCCCCT--TCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEE---EEEEEEECCHHHHHHHHTSCHHHHHHHHC
T ss_pred             EEEEcCCcCCCC--CcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCcccccccceeccccccchhhhhhhcc
Confidence            999999998665  6777888999999999999999999999999976   47999999976531               


Q ss_pred             --------------------------CCCCCchhhchHHHHHHHHHHHHHHhCc----CCceEEEeeCCcccCccccccc
Q 041914          159 --------------------------GGKRRTDYHMSKHAVIGLVRSASVQLGV----HGIRVNCVSPHGLATPLTCHAY  208 (264)
Q Consensus       159 --------------------------~~~~~~~y~~sK~al~~~~~~la~e~~~----~~i~v~~v~pG~v~t~~~~~~~  208 (264)
                                                +..+...|++||+++.+|++.++.|+++    .||+||+|+||+++|+|.... 
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~-  237 (275)
T d1wmaa1         159 ETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPK-  237 (275)
T ss_dssp             SSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTT-
T ss_pred             cccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCc-
Confidence                                      2234467999999999999999999865    589999999999999986421 


Q ss_pred             CCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh--CCCCCCeeccEEEecCe
Q 041914          209 GMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA--CRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~--s~~~~~~~G~~i~~dgG  260 (264)
                                         ...+|||+|+.+++++  .++...++|+.|. |.+
T Consensus       238 -------------------~~~~pee~A~~~~~~a~~~~~~~~~~G~~~~-~~~  271 (275)
T d1wmaa1         238 -------------------ATKSPEEGAETPVYLALLPPDAEGPHGQFVS-EKR  271 (275)
T ss_dssp             -------------------CSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE-TTE
T ss_pred             -------------------ccCCHHHHHHHHHHHHcCChhhcCCCeEEEE-CCE
Confidence                               2348999999999987  4567788999886 544

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=6.3e-41  Score=273.34  Aligned_cols=223  Identities=17%  Similarity=0.193  Sum_probs=177.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC-
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG-   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~-   90 (264)
                      +.|+||||||++|||+++|++|+++|+  .|++.+|+.++. +++.+. ...+++++++|++|.++++++++++.+.++ 
T Consensus         2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~-~~l~~~-~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~   79 (250)
T d1yo6a1           2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA-TELKSI-KDSRVHVLPLTVTCDKSLDTFVSKVGEIVGS   79 (250)
T ss_dssp             CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGC-HHHHTC-CCTTEEEEECCTTCHHHHHHHHHHHHHHHGG
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHH-HHHHHh-hCCceEEEEEecCCHHHHHHHHHHHHHHhCC
Confidence            459999999999999999999999997  456666666554 444433 234799999999999999999999998775 


Q ss_pred             -CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC----------CCcEEEEecCCCCCCC
Q 041914           91 -QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG----------VRGSIVCTASVAGSCG  159 (264)
Q Consensus        91 -~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~----------~~~~iv~iss~~~~~~  159 (264)
                       ++|+||||||+..+. .++.+.+.++|++.+++|+.|++++++.++|+|++++          ..+.++++++......
T Consensus        80 ~~idilinnAG~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~  158 (250)
T d1yo6a1          80 DGLSLLINNAGVLLSY-GTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSIT  158 (250)
T ss_dssp             GCCCEEEECCCCCCCB-CTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCST
T ss_pred             CCeEEEEEcCcccCCC-CccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccccc
Confidence             499999999987653 3678899999999999999999999999999998642          1468899888765543


Q ss_pred             -------CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCCh
Q 041914          160 -------GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRA  232 (264)
Q Consensus       160 -------~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (264)
                             ..+..+|++||+|+.+|++.++.|+++.||+||+|+||+++|+|....                    ...+|
T Consensus       159 ~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~--------------------~~~~~  218 (250)
T d1yo6a1         159 DNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKN--------------------AALTV  218 (250)
T ss_dssp             TCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred             CCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCC--------------------CCCCH
Confidence                   234567999999999999999999999999999999999999986321                    12478


Q ss_pred             HHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          233 GHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       233 edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      ||.++.++..+.+.....+|+.|..||
T Consensus       219 e~~a~~~~~~~~~~~~~~sG~f~~~~g  245 (250)
T d1yo6a1         219 EQSTAELISSFNKLDNSHNGRFFMRNL  245 (250)
T ss_dssp             HHHHHHHHHHHTTCCGGGTTCEEETTE
T ss_pred             HHHHHHHHHHHhcCCCCCCeEEECCCC
Confidence            999999999888777778999998876

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=274.66  Aligned_cols=215  Identities=21%  Similarity=0.259  Sum_probs=186.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      |+||++|||||++|||+++|++|+++|++|++++|+.+++.+...+..  .......+.+|+++.+.+....+.+.+.++
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            899999999999999999999999999999999998777655544432  335788999999999999999999999999


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      .+|+++||+|.....  ++.+.+.++|++++++|+.+++.+++.++|+|+++  +|+||++||..+..+.|+...|++||
T Consensus        92 ~~~~li~nag~~~~~--~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~--~G~ii~isS~~~~~~~p~~~~Y~asK  167 (269)
T d1xu9a_          92 GLDMLILNHITNTSL--NLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQS--NGSIVVVSSLAGKVAYPMVAAYSASK  167 (269)
T ss_dssp             SCSEEEECCCCCCCC--CCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TCEEEEEEEGGGTSCCTTCHHHHHHH
T ss_pred             Ccccccccccccccc--ccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhc--CCcceEeccchhcCCCCCchHHHHHH
Confidence            999999999987655  78889999999999999999999999999999864  58999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHhCc--CCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhC
Q 041914          171 HAVIGLVRSASVQLGV--HGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLAC  244 (264)
Q Consensus       171 ~al~~~~~~la~e~~~--~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s  244 (264)
                      +|+++|+++++.|+++  .||+||+|+||+++|+|.......            .+. ....+||++++.++....
T Consensus       168 aal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~~~~~------------~~~-~~~~~~e~~a~~i~~~~~  230 (269)
T d1xu9a_         168 FALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG------------IVH-MQAAPKEECALEIIKGGA  230 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHSCG------------GGG-GGCBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHHhccC------------Ccc-ccCCCHHHHHHHHHHHhh
Confidence            9999999999999974  579999999999999987543211            000 234578999988887553

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2.6e-40  Score=267.24  Aligned_cols=222  Identities=18%  Similarity=0.159  Sum_probs=184.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH--hcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ--NYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~i   92 (264)
                      +++||||||++|||++++++|+++|++|+++.|+.++..         .....+.+|..+.+......+.+..  ++++|
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   72 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQV   72 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc---------cccceeccccCchhHHHHHHHHHHHHhcCCCe
Confidence            456799999999999999999999999988888765421         2445677888888888887777776  45899


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |+||||||+.... .+..+.+.+.|+.++++|+.+++.+++.++|+|++   .|+||++||..+..+.+++..|++||+|
T Consensus        73 D~linnAG~~~~~-~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~---~g~Iv~isS~~~~~~~~~~~~Y~asKaa  148 (235)
T d1ooea_          73 DGVFCVAGGWAGG-SASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKP---GGLLQLTGAAAAMGPTPSMIGYGMAKAA  148 (235)
T ss_dssp             EEEEECCCCCCCB-CTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE---EEEEEEECCGGGGSCCTTBHHHHHHHHH
T ss_pred             eEEEECCcccccc-cccccCcHHHHhhHhhhHHHHHHHHhhhccccccc---ceEEEEeccHHhcCCcccccchHHHHHH
Confidence            9999999986543 24555667899999999999999999999999976   5799999999999999999999999999


Q ss_pred             HHHHHHHHHHHhC--cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHh-CCCCCC
Q 041914          173 VIGLVRSASVQLG--VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLA-CRDSEF  249 (264)
Q Consensus       173 l~~~~~~la~e~~--~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~-s~~~~~  249 (264)
                      +++|+++++.|++  +.+|+||+|+||+++|+|.+....            ..+. .++.+|+|+++.+++++ ++..+.
T Consensus       149 l~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~~~~------------~~~~-~~~~~~~~va~~~~~~l~~~~~~~  215 (235)
T d1ooea_         149 VHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWMP------------NADH-SSWTPLSFISEHLLKWTTETSSRP  215 (235)
T ss_dssp             HHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHST------------TCCG-GGCBCHHHHHHHHHHHHHCGGGCC
T ss_pred             HHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhhhCc------------CCcc-ccCCCHHHHHHHHHHHhcCccccC
Confidence            9999999999998  578999999999999998754321            1122 56779999999987554 566788


Q ss_pred             eeccEEEe---cCeee
Q 041914          250 VTGHDLVV---DGGFL  262 (264)
Q Consensus       250 ~~G~~i~~---dgG~~  262 (264)
                      ++|+.+.+   ||+..
T Consensus       216 ~tG~~i~v~~~~g~~~  231 (235)
T d1ooea_         216 SSGALLKITTENGTST  231 (235)
T ss_dssp             CTTCEEEEEEETTEEE
T ss_pred             CCceEEEEEeeCCEEE
Confidence            99999998   56544

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=5.4e-40  Score=268.89  Aligned_cols=218  Identities=22%  Similarity=0.337  Sum_probs=167.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~id~   94 (264)
                      |++|||||++|||+++|++|+++|++|+++++++++                ..+|+++....+....+...+. +.+|+
T Consensus         2 kVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~----------------~~~d~~~~~~~~~~~~~~~~~~~~~id~   65 (257)
T d1fjha_           2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE----------------VIADLSTAEGRKQAIADVLAKCSKGMDG   65 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS----------------EECCTTSHHHHHHHHHHHHTTCTTCCSE
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH----------------HHHHhcCHHHHHHHHHHHHHHhCCCCcE
Confidence            899999999999999999999999998888886543                3568999988888877776554 67999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------------  157 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------------  157 (264)
                      +|+|||+....         +.|.....+|..+...+.+...+.+.+.. ...+.++.+....                 
T Consensus        66 lv~~Ag~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  135 (257)
T d1fjha_          66 LVLCAGLGPQT---------KVLGNVVSVNYFGATELMDAFLPALKKGH-QPAAVVISSVASAHLAFDKNPLALALEAGE  135 (257)
T ss_dssp             EEECCCCCTTC---------SSHHHHHHHHTHHHHHHHHHHHHHHHTSS-SCEEEEECCGGGGSSCGGGCTTHHHHHHTC
T ss_pred             EEEcCCCCCcH---------HHHHHHHHHHHHHHHHHHHHhhhhhhhhc-cCcceeeeeccccchhhhhhhhhhhccCCc
Confidence            99999975433         24788899999999999999999998765 5555555544322                 


Q ss_pred             ----------C-CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh-cCCCCCC
Q 041914          158 ----------C-GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL-FEPQTPL  225 (264)
Q Consensus       158 ----------~-~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~~~  225 (264)
                                . +.++..+|++||+|+++|+|++|.||+++|||||+|+||+++|++.......  ++..+. .....|.
T Consensus       136 ~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~--~~~~~~~~~~~~Pl  213 (257)
T d1fjha_         136 EAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQD--PRYGESIAKFVPPM  213 (257)
T ss_dssp             HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCST
T ss_pred             EEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCC--HHHHHHHHhcCCCC
Confidence                      1 1223456999999999999999999999999999999999999998655321  222222 2333577


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                       +|+.+|||||++++||+|++++++|||+|.+|||++
T Consensus       214 -gR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG~t  249 (257)
T d1fjha_         214 -GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGGID  249 (257)
T ss_dssp             -TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTTHH
T ss_pred             -CCCcCHHHHHHHHHHHhCchhCCccCceEEeCCCcc
Confidence             899999999999999999999999999999999985

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.97  E-value=3.4e-31  Score=216.51  Aligned_cols=222  Identities=19%  Similarity=0.208  Sum_probs=166.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchh--hHHHHHhhh--CCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDE--LGRQVATSI--GVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++++|||||++|||+++|++|+++|++ |++++|+..+  ..+.+.+++  ...++.++.||++|.++++++++++.+. 
T Consensus         9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~-   87 (259)
T d2fr1a1           9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDD-   87 (259)
T ss_dssp             CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT-
T ss_pred             cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccc-
Confidence            569999999999999999999999996 6667775432  222322222  2357999999999999999999988664 


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +++|++|||+|.....  ++.+.+.++|++++++|+.+++++.+.+    .... .++||++||..+..+.++...|+++
T Consensus        88 ~~i~~vv~~ag~~~~~--~~~~~~~~~~~~~~~~~~~g~~~l~~~~----~~~~-~~~iv~~SS~a~~~g~~~~~~YaAa  160 (259)
T d2fr1a1          88 VPLSAVFHAAATLDDG--TVDTLTGERIERASRAKVLGARNLHELT----RELD-LTAFVLFSSFASAFGAPGLGGYAPG  160 (259)
T ss_dssp             SCEEEEEECCCCCCCC--CGGGCCHHHHHHHTHHHHHHHHHHHHHH----TTSC-CSEEEEEEEHHHHTCCTTCTTTHHH
T ss_pred             cccccccccccccccc--ccccccHHHHHHHhhhhccchhHHHHHh----hccC-CceEeeecchhhccCCcccHHHHHH
Confidence            5899999999998765  8999999999999999999999987754    3344 6899999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |++++.|++.++    ..|+++++|+||++.++....      +...+.+....   -..++|+++++.+..++....  
T Consensus       161 ka~l~~la~~~~----~~Gi~v~~I~pg~~~~~g~~~------~~~~~~~~~~G---~~~~~~~~~~~~l~~~l~~~~--  225 (259)
T d2fr1a1         161 NAYLDGLAQQRR----SDGLPATAVAWGTWAGSGMAE------GPVADRFRRHG---VIEMPPETACRALQNALDRAE--  225 (259)
T ss_dssp             HHHHHHHHHHHH----HTTCCCEEEEECCBC------------------CTTTT---EECBCHHHHHHHHHHHHHTTC--
T ss_pred             HHhHHHHHHHHH----hCCCCEEECCCCcccCCcccc------chHHHHHHhcC---CCCCCHHHHHHHHHHHHhCCC--
Confidence            999998877665    459999999999987653321      11122221111   234689999999998885432  


Q ss_pred             eeccEEEecC
Q 041914          250 VTGHDLVVDG  259 (264)
Q Consensus       250 ~~G~~i~~dg  259 (264)
                      .....+.+|.
T Consensus       226 ~~~~v~~~d~  235 (259)
T d2fr1a1         226 VCPIVIDVRW  235 (259)
T ss_dssp             SSCEECEECH
T ss_pred             ceEEEEeCcH
Confidence            3334445553

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.86  E-value=1.5e-20  Score=159.58  Aligned_cols=228  Identities=12%  Similarity=0.095  Sum_probs=155.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH----HHHHhh--hCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELG----RQVATS--IGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~----~~~~~~--~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .|+||||||+|.||.+++++|.++|++|+++.|+.....    +.+...  ....++.++++|++|.+++.+.++..   
T Consensus         1 ~K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   77 (357)
T d1db3a_           1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREV---   77 (357)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHH---
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhcc---
Confidence            389999999999999999999999999998888643211    111111  11247899999999999999998866   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                        .+|+++|+|+.....      .+.++.+..+++|+.++.++++++...-.+ + ..++|++||...+.          
T Consensus        78 --~~d~v~h~aa~~~~~------~~~~~~~~~~~~Nv~gt~nllea~~~~~~~-~-~~r~i~~SS~~vYG~~~~~~~~E~  147 (357)
T d1db3a_          78 --QPDEVYNLGAMSHVA------VSFESPEYTADVDAMGTLRLLEAIRFLGLE-K-KTRFYQASTSELYGLVQEIPQKET  147 (357)
T ss_dssp             --CCSEEEECCCCCTTT------TTTSCHHHHHHHHTHHHHHHHHHHHHTTCT-T-TCEEEEEEEGGGGTTCCSSSBCTT
T ss_pred             --CCCEEEEeecccccc------hhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-C-CcEEEEEEchhhhCCCCCCCcCCC
Confidence              789999999986543      123456778999999999999887543211 2 45899999865421          


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhcCCCC--------CCCC
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEPQT--------PLEG  227 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~--------~~~~  227 (264)
                       +..+...|+.||.+.+.+++.++..+   ++.+..+.|+.+.+|.......  .....+........        ...+
T Consensus       148 ~~~~P~~~Y~~sK~~~E~~~~~~~~~~---~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  224 (357)
T d1db3a_         148 TPFYPRSPYAVAKLYAYWITVNYRESY---GMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLR  224 (357)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEE
T ss_pred             CCCCCCChHHHHHHHHHHHHHHHHHHh---CCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeee
Confidence             23356789999999999999998875   7889999998888774221100  00011111111111        1113


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .++.++|+++++..++...    .|+.+++..|..
T Consensus       225 ~~~~v~D~~~a~~~~~~~~----~~~~yni~sg~~  255 (357)
T d1db3a_         225 DWGHAKDYVKMQWMMLQQE----QPEDFVIATGVQ  255 (357)
T ss_dssp             CCEEHHHHHHHHHHTTSSS----SCCCEEECCCCC
T ss_pred             cceeechHHHHHHHHHhCC----CCCeEEECCCCc
Confidence            4788999999998877532    466777776543

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.81  E-value=3.1e-22  Score=155.36  Aligned_cols=155  Identities=14%  Similarity=0.152  Sum_probs=110.6

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+.+|+||++|||||++|||+++++.|+++|++|+++.|+.++..+...+......+....+|++|.+++++++      
T Consensus        17 ~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~------   90 (191)
T d1luaa1          17 AGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAV------   90 (191)
T ss_dssp             TTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHT------
T ss_pred             cCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHh------
Confidence            46789999999999999999999999999999999999987766544443333335567889999998887765      


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-CCCCchhh
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-GKRRTDYH  167 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-~~~~~~y~  167 (264)
                       +++|+||||+|+..      ...+.++|++.+++|+.+.++.+..+.+.+......++++  ++.....+ ..+...|+
T Consensus        91 -~~iDilin~Ag~g~------~~~~~e~~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~g~~~y~  161 (191)
T d1luaa1          91 -KGAHFVFTAGAIGL------ELLPQAAWQNESSIEIVADYNAQPPLGIGGIDATDKGKEY--GGKRAFGALGIGGLKLK  161 (191)
T ss_dssp             -TTCSEEEECCCTTC------CCBCHHHHHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEE--TTEEEECHHHHHHHHHH
T ss_pred             -cCcCeeeecCcccc------ccCCHHHHHhhhcceeehhHhhHHHHHHHhhhhccCcEEe--cceEEEeccCcCcHHHH
Confidence             48999999999743      3368899999999999887776554433332221122222  22221111 12335699


Q ss_pred             chHHHHHHHHH
Q 041914          168 MSKHAVIGLVR  178 (264)
Q Consensus       168 ~sK~al~~~~~  178 (264)
                      ++|+++..|++
T Consensus       162 ~sk~a~~~l~~  172 (191)
T d1luaa1         162 LHRACIAKLFE  172 (191)
T ss_dssp             HHHHHHHHHTS
T ss_pred             HHHHHHHHHHh
Confidence            99999887764

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.80  E-value=4.2e-19  Score=150.84  Aligned_cols=226  Identities=15%  Similarity=0.093  Sum_probs=159.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh--HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDEL--GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +||||||+|.||.+++++|+++|+.+++..++....  ...+.......++.++.+|++|...+..+++..     ++|+
T Consensus         2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d~   76 (361)
T d1kewa_           2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQY-----QPDA   76 (361)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhC-----CCCE
Confidence            589999999999999999999999866655432211  122223333457899999999999999888755     7999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC----CCcEEEEecCCCCCC------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG----VRGSIVCTASVAGSC------------  158 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~----~~~~iv~iss~~~~~------------  158 (264)
                      +||+|+.....      .+.++..+.+++|+.++.++.+.+...-....    ...++|++||.....            
T Consensus        77 VihlAa~~~~~------~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~  150 (361)
T d1kewa_          77 VMHLAAESHVD------RSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSV  150 (361)
T ss_dssp             EEECCSCCCHH------HHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTS
T ss_pred             EEECccccchh------hHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccccc
Confidence            99999865322      23345577899999999999999887654321    035899999977542            


Q ss_pred             ---------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC-----
Q 041914          159 ---------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP-----  224 (264)
Q Consensus       159 ---------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~-----  224 (264)
                               +..+...|+.||.+.+.+++.++..+   ++.+..+.|+.+.+|.....  .....+........|     
T Consensus       151 ~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~~~~~--~~i~~~i~~~~~g~~~~v~g  225 (361)
T d1kewa_         151 TLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYHFPE--KLIPLVILNALEGKPLPIYG  225 (361)
T ss_dssp             CCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTCCTT--SHHHHHHHHHHHTCCEEEET
T ss_pred             CCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEecCceECcCCCcC--cHHHHHHHHHHcCCCcEEeC
Confidence                     12345679999999999999998775   78999999998888743210  111222221111111     


Q ss_pred             ---CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          225 ---LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       225 ---~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                         ..+.++.++|+|+++..++...   ..|..+++.+|.
T Consensus       226 ~g~~~r~~i~v~D~a~ai~~~~~~~---~~~~~~Ni~s~~  262 (361)
T d1kewa_         226 KGDQIRDWLYVEDHARALHMVVTEG---KAGETYNIGGHN  262 (361)
T ss_dssp             TSCCEEEEEEHHHHHHHHHHHHHHC---CTTCEEEECCCC
T ss_pred             CCCeEEeCEEHHHHHHHHHHHHhcC---CCCCeEEECCCC
Confidence               1123679999999999988543   236788887764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.78  E-value=1.2e-17  Score=143.17  Aligned_cols=174  Identities=14%  Similarity=0.064  Sum_probs=128.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch----------------hhHHHHH--hhhCCCcEEEEEecCCCHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD----------------ELGRQVA--TSIGVGKCHYVHCDVTNEC   76 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~----------------~~~~~~~--~~~~~~~~~~~~~D~s~~~   76 (264)
                      |++||||||+|.||.+++++|+++|++|+++.....                ...+.+.  ......++.++++|++|.+
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~   80 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFE   80 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHH
Confidence            789999999999999999999999999887741100                1111111  1112246899999999999


Q ss_pred             HHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCC
Q 041914           77 QVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAG  156 (264)
Q Consensus        77 ~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~  156 (264)
                      .++++++..     ++|+|||.|+....   +....+.+.....+.+|+.++.++++.+..    .+...++++.||...
T Consensus        81 ~l~~~~~~~-----~~d~ViHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~----~~~~~~~i~~ss~~~  148 (393)
T d1i24a_          81 FLAESFKSF-----EPDSVVHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKE----FGEECHLVKLGTMGE  148 (393)
T ss_dssp             HHHHHHHHH-----CCSEEEECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHH----HCTTCEEEEECCGGG
T ss_pred             HHHHHHHhh-----cchheecccccccc---ccccccccccccccccccccccHHHHHHHH----hccccceeecccccc
Confidence            999998866     79999999987543   233456677888999999999999888743    221456777777654


Q ss_pred             CC------------------------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcc
Q 041914          157 SC------------------------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPL  203 (264)
Q Consensus       157 ~~------------------------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~  203 (264)
                      ..                        +..+...|+.+|.+.+.+++.++.++   ++.+..+.|+.+..+.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             ccccccccccccccccccccccccccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence            31                        22345679999999999999888775   7899999988777653

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.78  E-value=4.8e-18  Score=142.85  Aligned_cols=227  Identities=13%  Similarity=0.144  Sum_probs=155.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch---hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQD---ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++|||||+|.||.++++.|+++|++|+++.|...   ...... +.....++.++++|++|.+.+.++++..     ++|
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~-----~~d   75 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVI-ERLGGKHPTFVEGDIRNEALMTEILHDH-----AID   75 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHH-HHHHTSCCEEEECCTTCHHHHHHHHHHT-----TCS
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHH-HhhcCCCCEEEEeecCCHHHHHHHHhcc-----CCC
Confidence            4999999999999999999999999888865322   121222 2223347889999999999998888754     699


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC------------CC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG------------GK  161 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~------------~~  161 (264)
                      ++||+|+.....      .+.++.++.+++|+.++.++++++...    + -.++|++||.....+            ..
T Consensus        76 ~ViHlAa~~~~~------~~~~~~~~~~~~Nv~gt~nlL~~~~~~----~-v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~  144 (338)
T d1udca_          76 TVIHFAGLKAVG------ESVQKPLEYYDNNVNGTLRLISAMRAA----N-VKNFIFSSSATVYGDQPKIPYVESFPTGT  144 (338)
T ss_dssp             EEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHHH----T-CCEEEEEEEGGGGCSCCSSSBCTTSCCCC
T ss_pred             EEEECCCccchh------hHHhCHHHHHHhHHHHHHHHHHHHHHh----C-CCEEEecCcceEEccccccccccccccCC
Confidence            999999964321      233456689999999999998887542    3 458999998776521            23


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--------ChHHHHhhc-CCCCC--------
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--------PADEVEKLF-EPQTP--------  224 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--------~~~~~~~~~-~~~~~--------  224 (264)
                      +...|+.+|.+.+.+.+....++  .++.+..+.|+.+.++......+.        ......... ....+        
T Consensus       145 p~~~Y~~sK~~~e~~~~~~~~~~--~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~  222 (338)
T d1udca_         145 PQSPYGKSKLMVEQILTDLQKAQ--PDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDY  222 (338)
T ss_dssp             CSSHHHHHHHHHHHHHHHHHHHS--TTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCS
T ss_pred             CcchHHHHHhhhhHHHHHHHhhc--cCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCc
Confidence            57789999999999998877664  367888888887776533211110        111221111 11110        


Q ss_pred             ------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          225 ------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       225 ------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                            ..+.++.++|++.+...+.........++.+++.++..
T Consensus       223 ~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~  266 (338)
T d1udca_         223 PTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVG  266 (338)
T ss_dssp             SSTTSSCEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSC
T ss_pred             ccCCCCceeeEEEEeehhhhccccccccccccCcceeeecCCCC
Confidence                  01236788999988777665445556678899887654

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.5e-18  Score=141.57  Aligned_cols=218  Identities=15%  Similarity=0.110  Sum_probs=147.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .|+||||||+|.||++++++|.++|++|+.+.+......+.+........+.....|+.+.            .+.++|+
T Consensus         1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~~~------------~~~~~d~   68 (312)
T d2b69a1           1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEP------------LYIEVDQ   68 (312)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSC------------CCCCCSE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHHHH------------HHcCCCE
Confidence            3889999999999999999999999999888764433333333333333556666665432            1237999


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------------  158 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------------  158 (264)
                      +||+|+.....   .   ..++..+.+++|+.++.++++++.    +.+  .++|++||.....                
T Consensus        69 VihlAa~~~~~---~---~~~~~~~~~~~Nv~g~~~ll~~~~----~~~--~k~I~~SS~~vy~~~~~~~~~e~~~~~~~  136 (312)
T d2b69a1          69 IYHLASPASPP---N---YMYNPIKTLKTNTIGTLNMLGLAK----RVG--ARLLLASTSEVYGDPEVHPQSEDYWGHVN  136 (312)
T ss_dssp             EEECCSCCSHH---H---HTTCHHHHHHHHHHHHHHHHHHHH----HHT--CEEEEEEEGGGGBSCSSSSBCTTCCCBCC
T ss_pred             EEECcccCCch---h---HHhCHHHHHHHHHHHHHHHHHHHH----HcC--CcEEEEEChheecCCCCCCCCccccCCCC
Confidence            99999865432   1   112456788999999999988764    333  3899999865442                


Q ss_pred             CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhh-cCCCC-------CCCCCCC
Q 041914          159 GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKL-FEPQT-------PLEGVVL  230 (264)
Q Consensus       159 ~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~-~~~~~-------~~~~~~~  230 (264)
                      |..+...|+.+|.+.+.+++.++.++   |+.+..+.|+.+..|............+... .....       ...+.++
T Consensus       137 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i  213 (312)
T d2b69a1         137 PIGPRACYDEGKRVAETMCYAYMKQE---GVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQ  213 (312)
T ss_dssp             SSSTTHHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECE
T ss_pred             CCCCccHHHHHHHHHHHHHHHHHHHh---CCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccE
Confidence            22356789999999999999998885   7999999999998875432211111222211 11110       1113577


Q ss_pred             ChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      ..+|+++++..++...    .+..+++.+|..+
T Consensus       214 ~v~D~~~~~~~~~~~~----~~~~~n~~~~~~~  242 (312)
T d2b69a1         214 YVSDLVNGLVALMNSN----VSSPVNLGNPEEH  242 (312)
T ss_dssp             EHHHHHHHHHHHHTSS----CCSCEEESCCCEE
T ss_pred             EHHHHHHHHHHHHhhc----cCCceEecCCccc
Confidence            8999999999888533    2446788776543

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=99.75  E-value=2.6e-17  Score=138.54  Aligned_cols=223  Identities=15%  Similarity=0.062  Sum_probs=148.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH--HHhhhCC-CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ--VATSIGV-GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .||+||||||+|.||.+++++|.++|++|+.+.|+..+....  ....... .....+..|++|.+++..++.       
T Consensus        10 ~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-------   82 (342)
T d1y1pa1          10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-------   82 (342)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-------
T ss_pred             CcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-------
Confidence            589999999999999999999999999998888876543221  1111222 234567789999987776664       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------  158 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------  158 (264)
                      .+|+++|+++.....      .+   ....+..|+.++.++++.+..   ..+ -.++|++||..+..            
T Consensus        83 ~~~~v~~~a~~~~~~------~~---~~~~~~~nv~gt~~ll~~~~~---~~~-v~~~i~~SS~~~~~~~~~~~~~~~~~  149 (342)
T d1y1pa1          83 GAAGVAHIASVVSFS------NK---YDEVVTPAIGGTLNALRAAAA---TPS-VKRFVLTSSTVSALIPKPNVEGIYLD  149 (342)
T ss_dssp             TCSEEEECCCCCSCC------SC---HHHHHHHHHHHHHHHHHHHHT---CTT-CCEEEEECCGGGTCCCCTTCCCCEEC
T ss_pred             cchhhhhhccccccc------cc---ccccccchhhhHHHHHHhhhc---ccc-cccccccccceeeccCCCCCCCcccc
Confidence            789999999865432      22   345678899998888887643   122 56899999975421            


Q ss_pred             -------------------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-hHHHH-h
Q 041914          159 -------------------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-ADEVE-K  217 (264)
Q Consensus       159 -------------------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-~~~~~-~  217 (264)
                                         +..+...|+.+|.+.+.+++.++.++. .++++.+++|+.+..+......... ...+. .
T Consensus       150 e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~  228 (342)
T d1y1pa1         150 EKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENK-PHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMS  228 (342)
T ss_dssp             TTCCCHHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHC-CSSEEEEEEESEEECCCSCTTTCCCHHHHHHHH
T ss_pred             ccccccccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcc-cccccceecccceeCCCCCccccccchHHHHHH
Confidence                               112335699999999999999888775 4688888889887766432211111 11111 1


Q ss_pred             hcCCC-------CCCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          218 LFEPQ-------TPLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       218 ~~~~~-------~~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      .....       .+. +.++.++|+|++.+..+.  .....|+.+...++
T Consensus       229 l~~g~~~~~~~~~~~-~~~v~v~Dva~~~i~~l~--~~~~~g~~~~~~~~  275 (342)
T d1y1pa1         229 LFNGEVSPALALMPP-QYYVSAVDIGLLHLGCLV--LPQIERRRVYGTAG  275 (342)
T ss_dssp             HHTTCCCHHHHTCCS-EEEEEHHHHHHHHHHHHH--CTTCCSCEEEECCE
T ss_pred             HHcCCcCcccCCccc-eeeeeHHHHHHHHHHhhc--CccccceEEEEcCC
Confidence            11111       111 347789999999776653  22345665554443

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.74  E-value=5.3e-17  Score=136.12  Aligned_cols=230  Identities=12%  Similarity=0.076  Sum_probs=154.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh----hHHHH---HhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE----LGRQV---ATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~----~~~~~---~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .|++|||||||.||.+++++|.++|++|+.+.|....    ....+   ........+.++.+|+++.+++.+.++..  
T Consensus         1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~--   78 (339)
T d1n7ha_           1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVI--   78 (339)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHH--
T ss_pred             CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhh--
Confidence            3899999999999999999999999999999885321    10111   11112246889999999999999888755  


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------  158 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------  158 (264)
                         ++|++||+|+.....      ...++....+..|+.+...++.++...........++++.||.....         
T Consensus        79 ---~~D~Vih~Aa~~~~~------~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~  149 (339)
T d1n7ha_          79 ---KPDEVYNLAAQSHVA------VSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSET  149 (339)
T ss_dssp             ---CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTT
T ss_pred             ---ccchhhhcccccccc------ccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCC
Confidence               799999999875432      23345678899999999999998876655543244666666654322         


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCC--------CCCCC
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQ--------TPLEG  227 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~--------~~~~~  227 (264)
                       +..+...|+.+|.+.+.+++.+...+   ++.+..+.|+.+..|........  ............        ....+
T Consensus       150 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r  226 (339)
T d1n7ha_         150 TPFHPRSPYAASKCAAHWYTVNYREAY---GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASR  226 (339)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEE
T ss_pred             CCCCCcchhhHHHHHHHHHHHHHHHHh---CCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccc
Confidence             23467789999999999999988775   79999999988887743211100  001111111111        11113


Q ss_pred             CCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          228 VVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      .++.++|+++++..++....  ..+..+....+
T Consensus       227 d~~~v~D~a~~~~~~~~~~~--~~~~~~~~~~~  257 (339)
T d1n7ha_         227 DWGFAGDYVEAMWLMLQQEK--PDDYVVATEEG  257 (339)
T ss_dssp             ECEEHHHHHHHHHHHHTSSS--CCEEEECCSCE
T ss_pred             cceeeehHHHHHHHHHhcCC--CCccccccccc
Confidence            47889999999999886442  33444443333

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.2e-17  Score=138.97  Aligned_cols=215  Identities=12%  Similarity=0.056  Sum_probs=145.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH----HHHH---hhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELG----RQVA---TSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |++|||||+|.||.+++++|.++|++|+.+.|+.....    +.+.   ......++.++.+|++|.+.+.++++..   
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---   78 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEV---   78 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHH---
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhc---
Confidence            44599999999999999999999999999988653210    1000   0011136889999999999999998866   


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC----------
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC----------  158 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~----------  158 (264)
                        ++++++|+++.....      ...+.....+++|+.++.++++++...-..+  ..++|++||...+.          
T Consensus        79 --~~~~v~~~~a~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~--~~~~i~~SS~~vyg~~~~~~~~E~  148 (347)
T d1t2aa_          79 --KPTEIYNLGAQSHVK------ISFDLAEYTADVDGVGTLRLLDAVKTCGLIN--SVKFYQASTSELYGKVQEIPQKET  148 (347)
T ss_dssp             --CCSEEEECCSCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTT--TCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred             --ccceeeeeeeccccc------hhhccchhhhhhHHHHHHHHHHHHHHcCCCC--CcEEEEecchheecCCCCCCCCCC
Confidence              789999998865332      2344566778999999999998875432221  34899999876431          


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC--ChHHHHhhcCCCC--------CCCC
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM--PADEVEKLFEPQT--------PLEG  227 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~--~~~~~~~~~~~~~--------~~~~  227 (264)
                       +..+...|+.||.+.+.+++.++..+   ++.+..+.|+.+..|........  .............        ...+
T Consensus       149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~---~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r  225 (347)
T d1t2aa_         149 TPFYPRSPYGAAKLYAYWIVVNFREAY---NLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKR  225 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEE
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCccee
Confidence             23356789999999999999887775   68888888877776532111000  0011111111111        1113


Q ss_pred             CCCChHHHHHHHHHHhCCC
Q 041914          228 VVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s~~  246 (264)
                      .++.++|+++++..++...
T Consensus       226 ~~i~v~D~~~a~~~~~~~~  244 (347)
T d1t2aa_         226 DWGHAKDYVEAMWLMLQND  244 (347)
T ss_dssp             CCEEHHHHHHHHHHHHHSS
T ss_pred             eeeEecHHHHHHHHHhhcC
Confidence            5789999999999988643

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.74  E-value=1.8e-17  Score=138.03  Aligned_cols=224  Identities=15%  Similarity=0.111  Sum_probs=153.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      |+||||||+|.||++++++|.++|++|+.+.|..... ...+.......++.++.+|++|.+++.+.+...     ..++
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~-----~~~~   75 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKA-----QPQE   75 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhccc-----cccc
Confidence            7899999999999999999999999999888865432 223333333357899999999999999888866     6788


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCC-----------CCCCCC
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGS-----------CGGKRR  163 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~-----------~~~~~~  163 (264)
                      ++|+++.....      ...++....+..|+.++.+++.++..    .+...++++.|+....           .+..+.
T Consensus        76 ~~~~a~~~~~~------~~~~~~~~~~~~n~~g~~~~l~~~~~----~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~  145 (321)
T d1rpna_          76 VYNLAAQSFVG------ASWNQPVTTGVVDGLGVTHLLEAIRQ----FSPETRFYQASTSEMFGLIQAERQDENTPFYPR  145 (321)
T ss_dssp             EEECCSCCCHH------HHTTSHHHHHHHHTHHHHHHHHHHHH----HCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred             ccccccccccc------ccccchHHHHhhhhhchHHHHHHHHH----hCCCcccccccchhhcCcccCCCCCCCCCcccc
Confidence            88888764332      11234578899999999998887743    2224577777775432           123456


Q ss_pred             chhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC--CChHHHHhhcCCCCC--------CCCCCCChH
Q 041914          164 TDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG--MPADEVEKLFEPQTP--------LEGVVLRAG  233 (264)
Q Consensus       164 ~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~~~~~--------~~~~~~~~e  233 (264)
                      ..|+.+|.+.+.+++.++.++   ++.+..+.|+.+..|.......  ..............+        ..+.++.++
T Consensus       146 ~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~  222 (321)
T d1rpna_         146 SPYGVAKLYGHWITVNYRESF---GLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAG  222 (321)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHH
T ss_pred             ChhHHHHHHHHHHHHHHHhhc---CCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeH
Confidence            889999999999999988775   6888888888777664221100  001111121111111        112478999


Q ss_pred             HHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          234 HVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       234 dva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      |+++++..++....    +..+++.+|.
T Consensus       223 D~~~~~~~~~~~~~----~~~~ni~~~~  246 (321)
T d1rpna_         223 DYVEAMWLMLQQDK----ADDYVVATGV  246 (321)
T ss_dssp             HHHHHHHHHHHSSS----CCCEEECCSC
T ss_pred             HHHHHHHHHHhcCC----cCCceecccc
Confidence            99999999885432    3446666553

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=9.3e-17  Score=125.46  Aligned_cols=199  Identities=17%  Similarity=0.091  Sum_probs=130.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ..|+++||||||.||++++++|.++|++|.++.|+.++...     .....+.++.+|++|.+++.++++       +.|
T Consensus         2 ~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-----~~~~~~~~~~gD~~d~~~l~~al~-------~~d   69 (205)
T d1hdoa_           2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-----EGPRPAHVVVGDVLQAADVDKTVA-------GQD   69 (205)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-----SSCCCSEEEESCTTSHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-----ccccccccccccccchhhHHHHhc-------CCC
Confidence            35889999999999999999999999999999998765421     122357899999999999888776       689


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCC----chhhch
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRR----TDYHMS  169 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~----~~y~~s  169 (264)
                      ++||++|...+.  ...           +++..++.+    +++.+++++ -.++|++||.......+..    ..|...
T Consensus        70 ~vi~~~g~~~~~--~~~-----------~~~~~~~~~----l~~aa~~~~-v~r~i~~ss~~~~~~~~~~~~~~~~~~~~  131 (205)
T d1hdoa_          70 AVIVLLGTRNDL--SPT-----------TVMSEGARN----IVAAMKAHG-VDKVVACTSAFLLWDPTKVPPRLQAVTDD  131 (205)
T ss_dssp             EEEECCCCTTCC--SCC-----------CHHHHHHHH----HHHHHHHHT-CCEEEEECCGGGTSCTTCSCGGGHHHHHH
T ss_pred             EEEEEeccCCch--hhh-----------hhhHHHHHH----HHHHHHhcC-CCeEEEEeeeeccCCCccccccccccchH
Confidence            999999875432  111           123333333    344456655 5699999987654332221    234444


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCCCCC
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRDSEF  249 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~~~~  249 (264)
                      |...+.       .++..+++...|.||.+...-....        ........ ....+++.+|+|+.++..+.+.  .
T Consensus       132 ~~~~e~-------~l~~~~~~~tiirp~~~~~~~~~~~--------~~~~~~~~-~~~~~i~~~DvA~~~~~~l~~~--~  193 (205)
T d1hdoa_         132 HIRMHK-------VLRESGLKYVAVMPPHIGDQPLTGA--------YTVTLDGR-GPSRVISKHDLGHFMLRCLTTD--E  193 (205)
T ss_dssp             HHHHHH-------HHHHTCSEEEEECCSEEECCCCCSC--------CEEESSSC-SSCSEEEHHHHHHHHHHTTSCS--T
T ss_pred             HHHHHH-------HHHhcCCceEEEecceecCCCCccc--------EEEeeCCC-CCCCcCCHHHHHHHHHHHhCCC--C
Confidence            444332       2345689999999998754321100        00111111 1145679999999999988543  3


Q ss_pred             eeccEEEecCe
Q 041914          250 VTGHDLVVDGG  260 (264)
Q Consensus       250 ~~G~~i~~dgG  260 (264)
                      ..|+.+.+.+-
T Consensus       194 ~~g~~~~~s~~  204 (205)
T d1hdoa_         194 YDGHSTYPSHQ  204 (205)
T ss_dssp             TTTCEEEEECC
T ss_pred             CCCEEEecCCc
Confidence            45888877653

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-16  Score=134.78  Aligned_cols=229  Identities=14%  Similarity=0.127  Sum_probs=154.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC------ch---hhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADI------QD---ELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      |+||||||+|.||.+++++|.++|++|+.+.+.      ..   ...+.+. .....++.++.+|++|.+.+.+++... 
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~~-   80 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQ-ELTGRSVEFEEMDILDQGALQRLFKKY-   80 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHH-HHHTCCCEEEECCTTCHHHHHHHHHHC-
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHH-HhcCCCcEEEEeecccccccccccccc-
Confidence            789999999999999999999999998887531      11   1122222 223347899999999999998887643 


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC-------
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG-------  159 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~-------  159 (264)
                          .+|+++|+|+.....      .+.++..+.+++|+.++.++++++    ++.+ ..+++++||......       
T Consensus        81 ----~~~~i~h~Aa~~~~~------~~~~~p~~~~~~Nv~gt~~l~~~~----~~~~-v~~~i~~ss~~~~~~~~~~~~~  145 (346)
T d1ek6a_          81 ----SFMAVIHFAGLKAVG------ESVQKPLDYYRVNLTGTIQLLEIM----KAHG-VKNLVFSSSATVYGNPQYLPLD  145 (346)
T ss_dssp             ----CEEEEEECCSCCCHH------HHHHCHHHHHHHHHHHHHHHHHHH----HHTT-CCEEEEEEEGGGGCSCSSSSBC
T ss_pred             ----ccccccccccccCcH------hhHhCHHHHHHhhhcccccccchh----hhcC-cccccccccceeeecccccccc
Confidence                789999999975432      233445678999999999888776    3434 457888887765421       


Q ss_pred             -----CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-----CC---hHHHHhh-cCCCC--
Q 041914          160 -----GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-----MP---ADEVEKL-FEPQT--  223 (264)
Q Consensus       160 -----~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-----~~---~~~~~~~-~~~~~--  223 (264)
                           ..+...|+.+|.+.+...+.++...  .++....+.|+.+.++......+     ..   ....... .....  
T Consensus       146 ~~~~~~~~~~~Y~~~k~~~e~~~~~~~~~~--~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  223 (346)
T d1ek6a_         146 EAHPTGGCTNPYGKSKFFIEEMIRDLCQAD--KTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREAL  223 (346)
T ss_dssp             TTSCCCCCSSHHHHHHHHHHHHHHHHHHHC--TTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCE
T ss_pred             ccccccccCChHHHHHHHHHHHHHHHHHhc--cCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcE
Confidence                 2356679999999999888776542  46777778887666542211100     00   1111111 11010  


Q ss_pred             -------C-----CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          224 -------P-----LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       224 -------~-----~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                             +     ..+.++.++|+|.++..+.........++++++.+|..+
T Consensus       224 ~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~  275 (346)
T d1ek6a_         224 NVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGY  275 (346)
T ss_dssp             EEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCE
T ss_pred             EEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcc
Confidence                   0     113478999999998887655556667889999877543

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.72  E-value=8.4e-17  Score=135.23  Aligned_cols=227  Identities=14%  Similarity=0.048  Sum_probs=156.5

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh---hHHHHHhhh---CCCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE---LGRQVATSI---GVGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .+-|++|||||+|.||.+++++|.++|++|+.+.+....   .........   ....+.++.+|+.|.........   
T Consensus        14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---   90 (341)
T d1sb8a_          14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA---   90 (341)
T ss_dssp             HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT---
T ss_pred             CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc---
Confidence            356899999999999999999999999998888754321   111121111   11468899999999987665543   


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------  158 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------  158 (264)
                          ..+.++|.++.....      ...++....+++|+.++.++++++.    +.+ ..++|++||.....        
T Consensus        91 ----~~~~v~~~~a~~~~~------~~~~~~~~~~~~Nv~gt~~ll~~~~----~~~-~~~~i~~SS~~vyg~~~~~~~~  155 (341)
T d1sb8a_          91 ----GVDYVLHQAALGSVP------RSINDPITSNATNIDGFLNMLIAAR----DAK-VQSFTYAASSSTYGDHPGLPKV  155 (341)
T ss_dssp             ----TCSEEEECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHH----HTT-CSEEEEEEEGGGGTTCCCSSBC
T ss_pred             ----ccccccccccccccc------ccccCccchhheeehhHHHHHHHHH----hcC-CceEEEcccceeeCCCCCCCcc
Confidence                779999888754322      2456778899999999999998874    333 45899999987542        


Q ss_pred             ---CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHHHH-hhcCCC-C------CC
Q 041914          159 ---GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADEVE-KLFEPQ-T------PL  225 (264)
Q Consensus       159 ---~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~~~-~~~~~~-~------~~  225 (264)
                         +..+...|+.+|.+.+.+++.++..+   ++++..+.|+.+.++.........  ..... ...... .      ..
T Consensus       156 E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~  232 (341)
T d1sb8a_         156 EDTIGKPLSPYAVTKYVNELYADVFSRCY---GFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGET  232 (341)
T ss_dssp             TTCCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCC
T ss_pred             CCCCCCCCCcchHHHHHHHHHHHHHHHHh---CCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCE
Confidence               23456889999999999999998775   688889999888766432211111  11111 111111 1      11


Q ss_pred             CCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          226 EGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       226 ~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      .+.++.++|++.+...++... ....|+.+.+..+.
T Consensus       233 ~r~~i~v~D~~~a~~~~~~~~-~~~~~~~~~~~~~~  267 (341)
T d1sb8a_         233 SRDFCYIENTVQANLLAATAG-LDARNQVYNIAVGG  267 (341)
T ss_dssp             EECCEEHHHHHHHHHHHHTCC-GGGCSEEEEESCSC
T ss_pred             EEEEEEEeccchhhhhhhhcc-ccccceeeeecccc
Confidence            245788999999988877543 23467777776553

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.72  E-value=6.2e-17  Score=136.41  Aligned_cols=171  Identities=13%  Similarity=0.133  Sum_probs=125.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHH--HHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQ--VATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|+||||||+|.||.+++++|.++|++|+++.+........  ..+.....++.++.+|++|.++++.+++..     ++
T Consensus         1 ~K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~-----~~   75 (347)
T d1z45a2           1 SKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEY-----KI   75 (347)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHS-----CC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhcc-----CC
Confidence            37999999999999999999999999988876433221111  112222346889999999999999888744     79


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC--------------
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC--------------  158 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~--------------  158 (264)
                      |++||+|+.....      ...+.....+.+|+.++.++++++..    .+ ..++|++||.....              
T Consensus        76 d~VihlAa~~~~~------~~~~~~~~~~~~N~~~t~~ll~~~~~----~~-i~~~i~~SS~~vyg~~~~~~~~~~~~e~  144 (347)
T d1z45a2          76 DSVIHFAGLKAVG------ESTQIPLRYYHNNILGTVVLLELMQQ----YN-VSKFVFSSSATVYGDATRFPNMIPIPEE  144 (347)
T ss_dssp             CEEEECCSCCCHH------HHHHSHHHHHHHHHHHHHHHHHHHHH----HT-CCEEEEEEEGGGGCCGGGSTTCCSBCTT
T ss_pred             CEEEEcccccccc------ccccCcccccccchhhhHHHHHHHHh----cc-cceEEeecceeeecCcccCCCCCccccc
Confidence            9999999976432      12344567888999999999998743    22 35899999966542              


Q ss_pred             -CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc
Q 041914          159 -GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       159 -~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                       +..+...|+.+|.+.+.+++.+.... ..++.+..+.|+.+..+
T Consensus       145 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~-~~~~~~~~lR~~~v~g~  188 (347)
T d1z45a2         145 CPLGPTNPYGHTKYAIENILNDLYNSD-KKSWKFAILRYFNPIGA  188 (347)
T ss_dssp             SCCCCCSHHHHHHHHHHHHHHHHHHHS-TTSCEEEEEEECEEECC
T ss_pred             cCCCCCChhHhHHHHHHHHHHHHHHhh-ccCCcEEEEeecceEee
Confidence             23356779999999999998887653 24677777777665543

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=99.70  E-value=1.1e-16  Score=133.68  Aligned_cols=224  Identities=17%  Similarity=0.166  Sum_probs=140.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH-HHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELG-RQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~-~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +||||||+|.||.+++++|.++|++|+++.+...... ..+.......++.++.+|++|.+++.++++..     ++|++
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~~-----~~d~V   76 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITKY-----MPDSC   76 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHhc-----CCceE
Confidence            6899999999999999999999999888754332221 22222333457899999999999999988765     68999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------------  158 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------------  158 (264)
                      ||+|+.....      ...++....+++|+.++.++++++..    .+ ..+.++.||.....                 
T Consensus        77 ih~aa~~~~~------~~~~~~~~~~~~Nv~gt~nll~~~~~----~~-~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~  145 (338)
T d1orra_          77 FHLAGQVAMT------TSIDNPCMDFEINVGGTLNLLEAVRQ----YN-SNCNIIYSSTNKVYGDLEQYKYNETETRYTC  145 (338)
T ss_dssp             EECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHHH----HC-TTCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred             Eeeccccccc------ccccChHHHHHHHHHHHHHHHHhhhc----cc-ccccccccccccccccccccccccccccccc
Confidence            9999875432      22345678899999999999987643    23 23444444433221                 


Q ss_pred             -----------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccC-CChHHHH----hhc-CC
Q 041914          159 -----------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYG-MPADEVE----KLF-EP  221 (264)
Q Consensus       159 -----------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~----~~~-~~  221 (264)
                                 +..+...|+.+|...+.+.......+.   +....+.|..+..+....... .......    ... ..
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (338)
T d1orra_         146 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFG---LNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGI  222 (338)
T ss_dssp             TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHC---CEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTC
T ss_pred             cccccCcccCCccccccccccccchhhhhhhhhhhccC---cccccccccceeeccccccccccccchhhHHHHHHHhcc
Confidence                       123467799999999999988888763   333333332222111100000 0001111    100 01


Q ss_pred             CCC--------CCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          222 QTP--------LEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       222 ~~~--------~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ..+        ..+.++.++|++++++.++.. .....|+.+.+.+|
T Consensus       223 ~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~-~~~~~~~~~~i~~~  268 (338)
T d1orra_         223 NKPFTISGNGKQVRDVLHAEDMISLYFTALAN-VSKIRGNAFNIGGT  268 (338)
T ss_dssp             CCCEEEESSSCCEEECEEHHHHHHHHHHHHHT-HHHHTTCEEEESSC
T ss_pred             CCceEEeCCCceeEeeecccchhhHHHHHHhc-cccccCcccccccc
Confidence            100        113467899999999987743 23456777777554

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=99.70  E-value=4e-17  Score=136.18  Aligned_cols=220  Identities=14%  Similarity=0.107  Sum_probs=152.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEE------EecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIV------IADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +||||||+|.||.+++++|.++|+.|..      +....... ...+........+.++..|+++.........      
T Consensus         2 kIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~------   75 (322)
T d1r6da_           2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR------   75 (322)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT------
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhcccc------
Confidence            5899999999999999999999987433      22211111 1111122223478999999999987665433      


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----------
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----------  159 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----------  159 (264)
                       .+|.++|+|+.....      .......+.+++|+.++.++++++.    +.+ ..++|++||.....+          
T Consensus        76 -~~d~vi~~a~~~~~~------~~~~~~~~~~~~N~~gt~~ll~~~~----~~~-~~~~I~~Ss~~~yg~~~~~~~~E~~  143 (322)
T d1r6da_          76 -GVDAIVHFAAESHVD------RSIAGASVFTETNVQGTQTLLQCAV----DAG-VGRVVHVSTNQVYGSIDSGSWTESS  143 (322)
T ss_dssp             -TCCEEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHH----HTT-CCEEEEEEEGGGGCCCSSSCBCTTS
T ss_pred             -ccceEEeeccccccc------ccccchHHHhhhhHHHHHHHHHHHH----HcC-CceEEEeecceeecCCCCCCCCCCC
Confidence             789999999875432      3445567788999999999988874    333 468999999876532          


Q ss_pred             -CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCC--------CCCCCC
Q 041914          160 -GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP--------LEGVVL  230 (264)
Q Consensus       160 -~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~  230 (264)
                       ..+...|+.+|.+.+.+++.+++++   ++.+..+.|+.+.+|....  ......+........+        ..+.++
T Consensus       144 ~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~~~--~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i  218 (322)
T d1r6da_         144 PLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPYQHP--EKLIPLFVTNLLDGGTLPLYGDGANVREWV  218 (322)
T ss_dssp             CCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTCCT--TSHHHHHHHHHHTTCCEEEETTSCCEEEEE
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcCCCc--CcHHHHHHHHHHcCCCcEEecCCCeEEccE
Confidence             3356789999999999999998875   7999999999998764221  1112222222111111        113478


Q ss_pred             ChHHHHHHHHHHhCCCCCCeeccEEEecCeee
Q 041914          231 RAGHVADAVLFLACRDSEFVTGHDLVVDGGFL  262 (264)
Q Consensus       231 ~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~  262 (264)
                      .++|+|+++..++....   .|+.+++..|-.
T Consensus       219 ~v~D~a~ai~~~~~~~~---~~~~~ni~~~~~  247 (322)
T d1r6da_         219 HTDDHCRGIALVLAGGR---AGEIYHIGGGLE  247 (322)
T ss_dssp             EHHHHHHHHHHHHHHCC---TTCEEEECCCCE
T ss_pred             EHHHHHHHHHHHHhCCC---CCCeeEEeeccc
Confidence            99999999999986543   478888877654

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=99.70  E-value=7.4e-17  Score=135.55  Aligned_cols=218  Identities=12%  Similarity=0.088  Sum_probs=147.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      +||||||+|.||++++++|+++| ++|+.+.+.......    .....++.++++|+++.+++.+.+.   +   ++|++
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~----~~~~~~~~~i~~Di~~~~~~~~~~~---~---~~d~V   71 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISR----FLNHPHFHFVEGDISIHSEWIEYHV---K---KCDVV   71 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGG----GTTCTTEEEEECCTTTCSHHHHHHH---H---HCSEE
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhh----hccCCCeEEEECccCChHHHHHHHH---h---CCCcc
Confidence            58999999999999999999999 467777654433221    1223478999999998766544322   1   58999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC----------------
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG----------------  159 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~----------------  159 (264)
                      ||+|+.....      ...++....+.+|+.++.++++++.    +.  +.+.++.||......                
T Consensus        72 ih~a~~~~~~------~~~~~~~~~~~~nv~gt~~ll~~~~----~~--~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~  139 (342)
T d2blla1          72 LPLVAIATPI------EYTRNPLRVFELDFEENLRIIRYCV----KY--RKRIIFPSTSEVYGMCSDKYFDEDHSNLIVG  139 (342)
T ss_dssp             EECBCCCCHH------HHHHSHHHHHHHHTHHHHHHHHHHH----HT--TCEEEEECCGGGGBTCCCSSBCTTTCCCBCC
T ss_pred             cccccccccc------ccccCCccccccccccccccccccc----cc--ccccccccccccccccccccccccccccccc
Confidence            9999975432      1234456789999999999999863    32  235666666554321                


Q ss_pred             --CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC------hHHHHhh-cCCC-------C
Q 041914          160 --GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP------ADEVEKL-FEPQ-------T  223 (264)
Q Consensus       160 --~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~------~~~~~~~-~~~~-------~  223 (264)
                        ..+...|+.||.+.+.+++.++..+   |+.+..+.|..+..+.........      ...+... ....       .
T Consensus       140 ~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g  216 (342)
T d2blla1         140 PVNKPRWIYSVSKQLLDRVIWAYGEKE---GLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGG  216 (342)
T ss_dssp             CTTCGGGHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGS
T ss_pred             ccCCCcchhhhcccchhhhhhhhhccc---CceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCC
Confidence              1234679999999999999998885   788888888877766332221110      1111111 1111       0


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecC
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDG  259 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dg  259 (264)
                      ...+.++.++|+++++..++........|+.+++.+
T Consensus       217 ~~~r~~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~  252 (342)
T d2blla1         217 KQKRCFTDIRDGIEALYRIIENAGNRCDGEIINIGN  252 (342)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECC
T ss_pred             CeeeeecccccccceeeeehhhccccCCCeEEEEec
Confidence            111347899999999999987655556689999853

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=99.69  E-value=6.9e-16  Score=130.05  Aligned_cols=216  Identities=16%  Similarity=0.066  Sum_probs=149.0

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      +++|+||||||+|.||.++++.|.++|++|..+.|........+........+.++.+|++|.+.+.++++..     .+
T Consensus         6 ~~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~-----~~   80 (356)
T d1rkxa_           6 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF-----QP   80 (356)
T ss_dssp             HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH-----CC
T ss_pred             hCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhc-----hh
Confidence            7899999999999999999999999999999888876544333222222246889999999999998888755     78


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC------------CC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC------------GG  160 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~------------~~  160 (264)
                      |+++|+++.....      .+.+.....+.+|+.++.++++++..   ... ...+++.|+.....            +.
T Consensus        81 ~~v~~~aa~~~~~------~~~~~~~~~~~~Nv~g~~n~l~~~~~---~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~~~  150 (356)
T d1rkxa_          81 EIVFHMAAQPLVR------LSYSEPVETYSTNVMGTVYLLEAIRH---VGG-VKAVVNITSDKCYDNKEWIWGYRENEAM  150 (356)
T ss_dssp             SEEEECCSCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH---HCC-CCEEEEECCGGGBCCCCSSSCBCTTSCB
T ss_pred             hhhhhhhcccccc------ccccCCccccccccccchhhhhhhhc---ccc-cccccccccccccccccccccccccccc
Confidence            9999999865332      23456678899999999998888753   122 34556555544432            22


Q ss_pred             CCCchhhchHHHHHHHHHHHHHHhC------cCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCC-------CCCC
Q 041914          161 KRRTDYHMSKHAVIGLVRSASVQLG------VHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQT-------PLEG  227 (264)
Q Consensus       161 ~~~~~y~~sK~al~~~~~~la~e~~------~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~-------~~~~  227 (264)
                      .+...|+.+|...+.+++.++.++.      ..++.+..+.|+.+..+...... .....+........       ....
T Consensus       151 ~p~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~  229 (356)
T d1rkxa_         151 GGYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALD-RIVPDILRAFEQSQPVIIRNPHAIR  229 (356)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSS-CHHHHHHHHHHTTCCEECSCTTCEE
T ss_pred             CCCCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhh-HHHHHHHHHHhCCCceEEeeccccc
Confidence            3567799999999999998887653      34678888889877765321111 11122222211111       1113


Q ss_pred             CCCChHHHHHHHHHHhC
Q 041914          228 VVLRAGHVADAVLFLAC  244 (264)
Q Consensus       228 ~~~~~edva~~~~~l~s  244 (264)
                      .++.++|++.++..++.
T Consensus       230 ~~~~v~D~~~a~~~~~~  246 (356)
T d1rkxa_         230 PWQHVLEPLSGYLLLAQ  246 (356)
T ss_dssp             CCEETHHHHHHHHHHHH
T ss_pred             cccccccccchhhhhhh
Confidence            46678999999777764

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.68  E-value=3e-16  Score=132.06  Aligned_cols=219  Identities=12%  Similarity=0.076  Sum_probs=143.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc--hhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQ--DELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      |.||||||+|.||.+++++|.++|+.|.++.+..  ..............++.++.+|+.|.+.+..++.       ..|
T Consensus         3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~-------~~~   75 (346)
T d1oc2a_           3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAA-------KAD   75 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHT-------TCS
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHh-------hhh
Confidence            6799999999999999999999999865554321  1111111111223478999999999999888765       678


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------------  158 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------------  158 (264)
                      .++|.|+.....      ....+..+.+++|+.++.+++..+..    .+  .++|++||.....               
T Consensus        76 ~v~~~a~~~~~~------~~~~~~~~~~~~N~~g~~nll~~~~~----~~--~k~i~~ss~~vyg~~~~~~~~~~~~~~~  143 (346)
T d1oc2a_          76 AIVHYAAESHND------NSLNDPSPFIHTNFIGTYTLLEAARK----YD--IRFHHVSTDEVYGDLPLREDLPGHGEGP  143 (346)
T ss_dssp             EEEECCSCCCHH------HHHHCCHHHHHHHTHHHHHHHHHHHH----HT--CEEEEEEEGGGGCCBCCGGGSTTTTCST
T ss_pred             hhhhhhhccccc------chhhCcccceeeehHhHHhhhhhhcc----cc--ccccccccceEecccCccccccccccCc
Confidence            899998865432      12234567889999999999887633    22  3667776665331               


Q ss_pred             --------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC-------C
Q 041914          159 --------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ-------T  223 (264)
Q Consensus       159 --------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~-------~  223 (264)
                              +..+...|+.+|.+.+.+++.+..++   ++++..+.|+.+..|...... .............       .
T Consensus       144 ~~~~~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~---~i~~~ilR~~~vyGp~~~~~~-~~~~~i~~~~~~~~~~i~~~g  219 (346)
T d1oc2a_         144 GEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSF---GVKATISNCSNNYGPYQHIEK-FIPRQITNILAGIKPKLYGEG  219 (346)
T ss_dssp             TSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEESTTCCTTS-HHHHHHHHHHHTCCCEEETTS
T ss_pred             ccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCEEEEeecceeCCCCCccc-hhHHHHHHHHcCCceeEeCCC
Confidence                    12345779999999999999888775   899999999988876321110 0011111111111       1


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCe
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGG  260 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG  260 (264)
                      ...+.++..+|++++++.++...   ..|..+.+.+|
T Consensus       220 ~~~r~~i~v~D~a~a~~~~~~~~---~~~~~~~~~~~  253 (346)
T d1oc2a_         220 KNVRDWIHTNDHSTGVWAILTKG---RMGETYLIGAD  253 (346)
T ss_dssp             CCEEECEEHHHHHHHHHHHHHHC---CTTCEEEECCS
T ss_pred             CccccccchhhHHHHHHHHHhhc---ccCcccccccc
Confidence            11145789999999998877433   22444444443

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.67  E-value=4.4e-16  Score=131.86  Aligned_cols=220  Identities=15%  Similarity=0.072  Sum_probs=151.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      +..+||||||+|.||.+++++|.++|++|+++.+.......   ...  ....+..+|+.+.+.+..+++       .+|
T Consensus        14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~---~~~--~~~~~~~~D~~~~~~~~~~~~-------~~d   81 (363)
T d2c5aa1          14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT---EDM--FCDEFHLVDLRVMENCLKVTE-------GVD   81 (363)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC---GGG--TCSEEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh---hhc--ccCcEEEeechhHHHHHHHhh-------cCC
Confidence            35679999999999999999999999998888665433211   001  234678889999887776654       789


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC---------------
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC---------------  158 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~---------------  158 (264)
                      .+||+|+.....  .   ...+.....+..|+.++.+++.++.    +.+ ..++|++||.....               
T Consensus        82 ~Vih~a~~~~~~--~---~~~~~~~~~~~~n~~gt~~ll~~~~----~~~-vk~~i~~SS~~~~~~~~~~~~~~~~~~~~  151 (363)
T d2c5aa1          82 HVFNLAADMGGM--G---FIQSNHSVIMYNNTMISFNMIEAAR----ING-IKRFFYASSACIYPEFKQLETTNVSLKES  151 (363)
T ss_dssp             EEEECCCCCCCH--H---HHTTCHHHHHHHHHHHHHHHHHHHH----HTT-CSEEEEEEEGGGSCGGGSSSSSSCEECGG
T ss_pred             eEeecccccccc--c---ccccccccccccccchhhHHHHhHH----hhC-ccccccccccccccccccccccccccccc
Confidence            999999876442  1   1123567788899999988888763    333 46899999987653               


Q ss_pred             ---CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC---hHHHH-hhcCCC--------C
Q 041914          159 ---GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP---ADEVE-KLFEPQ--------T  223 (264)
Q Consensus       159 ---~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~---~~~~~-~~~~~~--------~  223 (264)
                         +..+...|+.+|.+.+.+++.+..++   |+.+..+.|+.+..+.........   ..... ......        .
T Consensus       152 e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~  228 (363)
T d2c5aa1         152 DAWPAEPQDAFGLEKLATEELCKHYNKDF---GIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGL  228 (363)
T ss_dssp             GGSSBCCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSC
T ss_pred             cCCcCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCC
Confidence               12346789999999999999888775   789999999888876422111111   01111 111111        1


Q ss_pred             CCCCCCCChHHHHHHHHHHhCCCCCCeeccEEEecCeeec
Q 041914          224 PLEGVVLRAGHVADAVLFLACRDSEFVTGHDLVVDGGFLI  263 (264)
Q Consensus       224 ~~~~~~~~~edva~~~~~l~s~~~~~~~G~~i~~dgG~~~  263 (264)
                      +. +.++..+|+++++..++...    .|+.+++.+|..+
T Consensus       229 ~~-rd~i~v~D~~~~~~~~~~~~----~~~~~ni~~~~~~  263 (363)
T d2c5aa1         229 QT-RSFTFIDECVEGVLRLTKSD----FREPVNIGSDEMV  263 (363)
T ss_dssp             CE-ECCEEHHHHHHHHHHHHHSS----CCSCEEECCCCCE
T ss_pred             eE-EEEeehhHHHHHHHHHHhCC----CCCeEEEecCCcc
Confidence            12 45788999999999887532    4567888777543

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=99.64  E-value=2e-15  Score=125.19  Aligned_cols=191  Identities=16%  Similarity=0.160  Sum_probs=134.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      .|+||||||+|.||.+++++|+++|+.++++.++.                   .+|+.+.+.+..+++.-     .+|.
T Consensus         2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~-------------------~~~~~~~~~~~~~~~~~-----~~d~   57 (315)
T d1e6ua_           2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD-------------------ELNLLDSRAVHDFFASE-----RIDQ   57 (315)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT-------------------TCCTTCHHHHHHHHHHH-----CCSE
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch-------------------hccccCHHHHHHHHhhc-----CCCE
Confidence            47899999999999999999999999876554432                   15899998888877633     7899


Q ss_pred             EEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC---------------
Q 041914           95 MFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG---------------  159 (264)
Q Consensus        95 lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~---------------  159 (264)
                      ++|+++.....  .   .......+.+++|+.++.++++++..    .+ -.++|++||.....+               
T Consensus        58 v~~~a~~~~~~--~---~~~~~~~~~~~~Nv~gt~~ll~~a~~----~~-v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~  127 (315)
T d1e6ua_          58 VYLAAAKVGGI--V---ANNTYPADFIYQNMMIESNIIHAAHQ----ND-VNKLLFLGSSCIYPKLAKQPMAESELLQGT  127 (315)
T ss_dssp             EEECCCCCCCH--H---HHHHCHHHHHHHHHHHHHHHHHHHHH----TT-CCEEEEECCGGGSCTTCCSSBCGGGTTSSC
T ss_pred             EEEcchhcccc--c---cchhhHHHHHHHHHHHHHHHHHHHHH----cC-CCEEEEECCceEcCCCCCCCccCCccccCC
Confidence            99999765432  1   13344566788999999998887743    33 458999999886532               


Q ss_pred             -CCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC--hHH-----HHhh-cC--------CC
Q 041914          160 -GKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP--ADE-----VEKL-FE--------PQ  222 (264)
Q Consensus       160 -~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~--~~~-----~~~~-~~--------~~  222 (264)
                       .++...|+.+|.+.+.+++.+..+.   |+++..+.|+.+..|.........  ...     .... ..        ..
T Consensus       128 ~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g  204 (315)
T d1e6ua_         128 LEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSG  204 (315)
T ss_dssp             CCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCS
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCC
Confidence             1234579999999999999998875   799999999988876432111110  000     0110 00        11


Q ss_pred             CCCCCCCCChHHHHHHHHHHh
Q 041914          223 TPLEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       223 ~~~~~~~~~~edva~~~~~l~  243 (264)
                      .+. ..++.++|++.++..++
T Consensus       205 ~~~-~~~~~v~d~~~~~~~~~  224 (315)
T d1e6ua_         205 TPM-REFLHVDDMAAASIHVM  224 (315)
T ss_dssp             CCE-ECEEEHHHHHHHHHHHH
T ss_pred             ceE-EEEEEeehhHHHHHHhh
Confidence            122 45678899999988876

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=99.63  E-value=9.3e-15  Score=124.48  Aligned_cols=172  Identities=17%  Similarity=0.186  Sum_probs=123.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEec---------Cchhh---HHHHHhhhC------CCcEEEEEecCCCH
Q 041914           15 GKVAIITGGASGIGETTARLFAD-HGARMIVIAD---------IQDEL---GRQVATSIG------VGKCHYVHCDVTNE   75 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~---------~~~~~---~~~~~~~~~------~~~~~~~~~D~s~~   75 (264)
                      +.+||||||+|.||.+++++|++ .|++|+++.+         ..+..   ...+.....      ...+.++.+|++|.
T Consensus         2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~   81 (383)
T d1gy8a_           2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE   81 (383)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred             cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence            45799999999999999999986 6899887752         11111   111111111      13578899999999


Q ss_pred             HHHHHHHHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           76 CQVKALVDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        76 ~~~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      +.++++++..    .++|++||+|+.....      ...+.....+++|+.++..+++++.    +.+ ..++++.++..
T Consensus        82 ~~l~~~~~~~----~~~d~ViH~Aa~~~~~------~~~~~~~~~~~~N~~~t~~~l~~~~----~~~-~~~~~~~~s~~  146 (383)
T d1gy8a_          82 DFLNGVFTRH----GPIDAVVHMCAFLAVG------ESVRDPLKYYDNNVVGILRLLQAML----LHK-CDKIIFSSSAA  146 (383)
T ss_dssp             HHHHHHHHHS----CCCCEEEECCCCCCHH------HHHHCHHHHHHHHHHHHHHHHHHHH----HTT-CCEEEEEEEGG
T ss_pred             HHhhhhhhcc----ceeehhhccccccccc------ccccccccccccccccccccchhhh----ccC-Ccccccccccc
Confidence            9988888644    4789999999975432      2334566788999999999988874    333 34666666554


Q ss_pred             CCC------------------CCCCCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCccc
Q 041914          156 GSC------------------GGKRRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLT  204 (264)
Q Consensus       156 ~~~------------------~~~~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~  204 (264)
                      ...                  +..+...|+.+|.+.+.+++.+...+   |+.+.++.|+.+..+..
T Consensus       147 ~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~~  210 (383)
T d1gy8a_         147 IFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAHE  210 (383)
T ss_dssp             GTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCCT
T ss_pred             cccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccCc
Confidence            431                  22356889999999999999988775   78999999988776643

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.62  E-value=3.4e-16  Score=124.54  Aligned_cols=199  Identities=15%  Similarity=0.129  Sum_probs=133.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .+++.+|+||||||||.||++++++|.++|.  +|.++.|+........     ...+....+|+.+.+++...+     
T Consensus         9 ~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-----~~~i~~~~~D~~~~~~~~~~~-----   78 (232)
T d2bkaa1           9 DFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-----YKNVNQEVVDFEKLDDYASAF-----   78 (232)
T ss_dssp             HHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-----GGGCEEEECCGGGGGGGGGGG-----
T ss_pred             HhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-----cceeeeeeecccccccccccc-----
Confidence            4567889999999999999999999999996  7888888764432111     125667778888765544333     


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhh
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYH  167 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~  167 (264)
                        .+.|++||++|...         .........++|+..+..+.+.+    .+.+ -.++|++|+......  ....|+
T Consensus        79 --~~~d~vi~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~a----~~~~-v~~fi~~Ss~~~~~~--~~~~Y~  140 (232)
T d2bkaa1          79 --QGHDVGFCCLGTTR---------GKAGAEGFVRVDRDYVLKSAELA----KAGG-CKHFNLLSSKGADKS--SNFLYL  140 (232)
T ss_dssp             --SSCSEEEECCCCCH---------HHHHHHHHHHHHTHHHHHHHHHH----HHTT-CCEEEEECCTTCCTT--CSSHHH
T ss_pred             --cccccccccccccc---------cccchhhhhhhcccccceeeecc----cccC-ccccccCCccccccC--ccchhH
Confidence              47899999998542         22355667888999888888876    3444 568999999876543  345699


Q ss_pred             chHHHHHHHHHHHHHHhCcCCc-eEEEeeCCcccCcccccccCCChHHHHhhcCCCCC---CCCCCCChHHHHHHHHHHh
Q 041914          168 MSKHAVIGLVRSASVQLGVHGI-RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTP---LEGVVLRAGHVADAVLFLA  243 (264)
Q Consensus       168 ~sK~al~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~edva~~~~~l~  243 (264)
                      .+|...+...+.       .+. ++..+.||.+..+.....   ........+....+   .....++++|+|++++..+
T Consensus       141 ~~K~~~E~~l~~-------~~~~~~~IlRP~~i~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~  210 (232)
T d2bkaa1         141 QVKGEVEAKVEE-------LKFDRYSVFRPGVLLCDRQESR---PGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNV  210 (232)
T ss_dssp             HHHHHHHHHHHT-------TCCSEEEEEECCEEECTTGGGS---HHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHH
T ss_pred             HHHHHhhhcccc-------ccccceEEecCceeecCCCcCc---HHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHH
Confidence            999887765432       243 467789999987743211   11122222222221   1133467899999988877


Q ss_pred             CCC
Q 041914          244 CRD  246 (264)
Q Consensus       244 s~~  246 (264)
                      ...
T Consensus       211 ~~~  213 (232)
T d2bkaa1         211 VRP  213 (232)
T ss_dssp             TSC
T ss_pred             hcC
Confidence            443

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.62  E-value=2e-15  Score=119.85  Aligned_cols=216  Identities=11%  Similarity=0.122  Sum_probs=135.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEE--EecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIV--IADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++||||||+|.||++++++|+++|+++.+  +.|+.++...     .. ..+.++.+|+++.+++.++++       ++|
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~-----~~-~~~~~~~~d~~~~~~~~~~~~-------~~d   70 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEK-----IG-GEADVFIGDITDADSINPAFQ-------GID   70 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHH-----TT-CCTTEEECCTTSHHHHHHHHT-------TCS
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHh-----cc-CCcEEEEeeeccccccccccc-------cce
Confidence            79999999999999999999999987443  4454433211     11 256789999999999887765       789


Q ss_pred             EEEEcCCCCCCCCC-------CccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           94 IMFSNAGILSSSDQ-------TVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        94 ~lv~~ag~~~~~~~-------~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      .+||+++.......       .........+.....+|+.++..++......    . .+...+.++.....+..+...+
T Consensus        71 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~s~~~~~~~~~~~~~~  145 (252)
T d2q46a1          71 ALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVA----G-VKHIVVVGSMGGTNPDHPLNKL  145 (252)
T ss_dssp             EEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHH----T-CSEEEEEEETTTTCTTCGGGGG
T ss_pred             eeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccc----c-ccccccccccccCCCCcccccc
Confidence            99999986542110       1111122334556678888888777665432    2 4677777877766665544444


Q ss_pred             hchHHHHHH-HHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          167 HMSKHAVIG-LVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       167 ~~sK~al~~-~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ..++..... ....+.   ...|+++..++||.+..+........ ........    .....+++++|+|++++.++..
T Consensus       146 ~~~~~~~~~~~~~~~~---~~~~~~~~ilRp~~v~g~~~~~~~~~-~~~~~~~~----~~~~~~i~~~Dva~a~~~~l~~  217 (252)
T d2q46a1         146 GNGNILVWKRKAEQYL---ADSGTPYTIIRAGGLLDKEGGVRELL-VGKDDELL----QTDTKTVPRADVAEVCIQALLF  217 (252)
T ss_dssp             GGCCHHHHHHHHHHHH---HHSSSCEEEEEECEEECSCTTSSCEE-EESTTGGG----GSSCCEEEHHHHHHHHHHHTTC
T ss_pred             cccchhhhhhhhhhhh---hcccccceeecceEEECCCcchhhhh-hccCcccc----cCCCCeEEHHHHHHHHHHHhCC
Confidence            444433322 222222   23589999999999877643211100 00000000    1113467899999999998853


Q ss_pred             CCCCeeccEEEecC
Q 041914          246 DSEFVTGHDLVVDG  259 (264)
Q Consensus       246 ~~~~~~G~~i~~dg  259 (264)
                      +  ...|+.|++.+
T Consensus       218 ~--~~~g~~~~i~~  229 (252)
T d2q46a1         218 E--EAKNKAFDLGS  229 (252)
T ss_dssp             G--GGTTEEEEEEE
T ss_pred             c--cccCcEEEEee
Confidence            3  35688898854

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.42  E-value=1.1e-13  Score=108.06  Aligned_cols=189  Identities=17%  Similarity=0.120  Sum_probs=116.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCc--EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGAR--MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|++|||||||.||++++++|.++|+.  |+.+.|+....         ..+   +..+..|..++..      ...+.+
T Consensus         2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~---------~~~---~~~~~~d~~~~~~------~~~~~~   63 (212)
T d2a35a1           2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---------HPR---LDNPVGPLAELLP------QLDGSI   63 (212)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---------CTT---EECCBSCHHHHGG------GCCSCC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh---------ccc---ccccccchhhhhh------ccccch
Confidence            489999999999999999999999984  44455543221         112   3344455433221      223578


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchHHH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSKHA  172 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK~a  172 (264)
                      |.+|+++|.....        ...-+...++|+.++..+++.+    ++.+ -.+++++||..+..  .....|..+|..
T Consensus        64 d~vi~~~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~a----~~~~-v~~~i~~Ss~~~~~--~~~~~y~~~K~~  128 (212)
T d2a35a1          64 DTAFCCLGTTIKE--------AGSEEAFRAVDFDLPLAVGKRA----LEMG-ARHYLVVSALGADA--KSSIFYNRVKGE  128 (212)
T ss_dssp             SEEEECCCCCHHH--------HSSHHHHHHHHTHHHHHHHHHH----HHTT-CCEEEEECCTTCCT--TCSSHHHHHHHH
T ss_pred             heeeeeeeeeccc--------cccccccccchhhhhhhccccc----cccc-cccccccccccccc--ccccchhHHHHH
Confidence            9999999864321        1123567888999988888876    3433 56899999887653  345678989987


Q ss_pred             HHHHHHHHHHHhCcCCc-eEEEeeCCcccCcccccccCCChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCCC
Q 041914          173 VIGLVRSASVQLGVHGI-RVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACRD  246 (264)
Q Consensus       173 l~~~~~~la~e~~~~~i-~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~~  246 (264)
                      .+...+       ..+. +...+.|+.+..+......   .......+....+...+.+..+|+|++++.++.++
T Consensus       129 ~E~~l~-------~~~~~~~~I~Rp~~v~G~~~~~~~---~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~  193 (212)
T d2a35a1         129 LEQALQ-------EQGWPQLTIARPSLLFGPREEFRL---AEILAAPIARILPGKYHGIEACDLARALWRLALEE  193 (212)
T ss_dssp             HHHHHT-------TSCCSEEEEEECCSEESTTSCEEG---GGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCC
T ss_pred             Hhhhcc-------ccccccceeeCCcceeCCcccccH---HHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCC
Confidence            765443       2343 5778899998776432110   00000111111111112367899999999998654

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.36  E-value=4.5e-12  Score=102.60  Aligned_cols=193  Identities=15%  Similarity=0.074  Sum_probs=126.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      .++|||||+|.||.+++++|.++|++|+.+.|+.                    +|+.|.++++++++..     ++|++
T Consensus         2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~--------------------~D~~d~~~~~~~l~~~-----~~d~v   56 (281)
T d1vl0a_           2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD--------------------LDITNVLAVNKFFNEK-----KPNVV   56 (281)
T ss_dssp             EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT--------------------CCTTCHHHHHHHHHHH-----CCSEE
T ss_pred             CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh--------------------ccCCCHHHHHHHHHHc-----CCCEE
Confidence            3589999999999999999999999988877642                    4899999999888755     78999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCCc
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRRT  164 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~  164 (264)
                      ||+++.....      ......+..+..|+.....+......    .  ...+++.||.....           +..+..
T Consensus        57 ih~a~~~~~~------~~~~~~~~~~~~n~~~~~~~~~~~~~----~--~~~~~~~ss~~v~~~~~~~~~~e~~~~~~~~  124 (281)
T d1vl0a_          57 INCAAHTAVD------KCEEQYDLAYKINAIGPKNLAAAAYS----V--GAEIVQISTDYVFDGEAKEPITEFDEVNPQS  124 (281)
T ss_dssp             EECCCCCCHH------HHHHCHHHHHHHHTHHHHHHHHHHHH----H--TCEEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred             Eeeccccccc------cccccchhhccccccccccccccccc----c--cccccccccceeeeccccccccccccccchh
Confidence            9998865432      22334466777788777776665533    2  23555556554321           234566


Q ss_pred             hhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHHHHhhcCCC------CCCCCCCCChHHHHHH
Q 041914          165 DYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADEVEKLFEPQ------TPLEGVVLRAGHVADA  238 (264)
Q Consensus       165 ~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~edva~~  238 (264)
                      .|+.+|...+.+.+.       .+.....+.|+.+..+...-     ...........      ....+.++.++|++++
T Consensus       125 ~~~~~k~~~e~~~~~-------~~~~~~i~R~~~vyG~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~~~~  192 (281)
T d1vl0a_         125 AYGKTKLEGENFVKA-------LNPKYYIVRTAWLYGDGNNF-----VKTMINLGKTHDELKVVHDQVGTPTSTVDLARV  192 (281)
T ss_dssp             HHHHHHHHHHHHHHH-------HCSSEEEEEECSEESSSSCH-----HHHHHHHHHHCSEEEEESSCEECCEEHHHHHHH
T ss_pred             hhhhhhhHHHHHHHH-------hCCCccccceeEEeCCCccc-----ccchhhhhccCCceeecCCceeccchhhhhhhh
Confidence            788888777665532       24567788998887663211     11111111101      1122457799999999


Q ss_pred             HHHHhCCCCCCeeccEEEecCee
Q 041914          239 VLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       239 ~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      +..++...   .+| .+++.+|-
T Consensus       193 ~~~~~~~~---~~g-~~~~~~~~  211 (281)
T d1vl0a_         193 VLKVIDEK---NYG-TFHCTCKG  211 (281)
T ss_dssp             HHHHHHHT---CCE-EEECCCBS
T ss_pred             hhhhhhhc---ccC-ceeEeCCC
Confidence            99998543   245 45555543

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=99.34  E-value=6.2e-12  Score=103.03  Aligned_cols=212  Identities=11%  Similarity=0.022  Sum_probs=118.1

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH---HHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR---QVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~---~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      .++||||||+|.||++++++|.++|++|+++.|.......   ..........+.++++|+.|.+++.+.++       .
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~-------~   75 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALK-------Q   75 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHT-------T
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhcc-------C
Confidence            3569999999999999999999999999999886543211   11122223468899999999988887765       6


Q ss_pred             ccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC-CCCchhhchH
Q 041914           92 LDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG-KRRTDYHMSK  170 (264)
Q Consensus        92 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~-~~~~~y~~sK  170 (264)
                      .+.++++++.....                 .|..+...++.++    .+.. ..++++.||....... .....+..++
T Consensus        76 ~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~a----~~~~-~~~~v~~Ss~g~~~~~~~~~~~~~~~~  133 (312)
T d1qyda_          76 VDVVISALAGGVLS-----------------HHILEQLKLVEAI----KEAG-NIKRFLPSEFGMDPDIMEHALQPGSIT  133 (312)
T ss_dssp             CSEEEECCCCSSSS-----------------TTTTTHHHHHHHH----HHSC-CCSEEECSCCSSCTTSCCCCCSSTTHH
T ss_pred             cchhhhhhhhcccc-----------------cchhhhhHHHHHH----HHhc-CCcEEEEeeccccCCCcccccchhhhh
Confidence            78898888754322                 1222233333332    3333 4566667765443221 1112223333


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCC-----hHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMP-----ADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ......+.....   ..++....+.|+.+..+.........     .......+.... ....++.++|+|++++.++..
T Consensus       134 ~~~~~~~~~~~~---~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~v~Dva~a~~~~l~~  209 (312)
T d1qyda_         134 FIDKRKVRRAIE---AASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGN-VKGIWVDEDDVGTYTIKSIDD  209 (312)
T ss_dssp             HHHHHHHHHHHH---HTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSC-SEEEEECHHHHHHHHHHHTTC
T ss_pred             hHHHHHHHHhhc---ccccceEEeccceeecCCccchhhHHHHhhhcccccccccccc-cccceeeHHHHHHHHHHHhcC
Confidence            333222333222   34677888888877654321111000     000000011111 113478899999999998853


Q ss_pred             CCCCeeccEEEecCe
Q 041914          246 DSEFVTGHDLVVDGG  260 (264)
Q Consensus       246 ~~~~~~G~~i~~dgG  260 (264)
                      . ...++..+.+.++
T Consensus       210 ~-~~~~~~~~~~~~~  223 (312)
T d1qyda_         210 P-QTLNKTMYIRPPM  223 (312)
T ss_dssp             G-GGSSSEEECCCGG
T ss_pred             c-cccCceEEEeCCC
Confidence            2 2233333445444

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=99.30  E-value=1.7e-11  Score=99.74  Aligned_cols=194  Identities=15%  Similarity=0.154  Sum_probs=115.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH--HH--HhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR--QV--ATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .|+||||||+|.||++++++|.++|++|+++.|.......  ..  ........+.++.+|+.+.......++       
T Consensus         3 kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-------   75 (307)
T d1qyca_           3 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-------   75 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-------
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhh-------
Confidence            5889999999999999999999999999999987543211  11  111223457889999999988877776       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhchH
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMSK  170 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sK  170 (264)
                      ..+.++++++.....                     +...+.+++    ...+ ...+++.|+............+...+
T Consensus        76 ~~~~vi~~~~~~~~~---------------------~~~~~~~a~----~~~~-~~~~~~~s~~~~~~~~~~~~~~~~~~  129 (307)
T d1qyca_          76 NVDVVISTVGSLQIE---------------------SQVNIIKAI----KEVG-TVKRFFPSEFGNDVDNVHAVEPAKSV  129 (307)
T ss_dssp             TCSEEEECCCGGGSG---------------------GGHHHHHHH----HHHC-CCSEEECSCCSSCTTSCCCCTTHHHH
T ss_pred             hceeeeecccccccc---------------------hhhHHHHHH----HHhc-cccceeeecccccccccccccccccc
Confidence            678999988754321                     112222222    2323 34667777665544333333333333


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCC----ChHHHHhhcCCCCCCCCCCCChHHHHHHHHHHhCC
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGM----PADEVEKLFEPQTPLEGVVLRAGHVADAVLFLACR  245 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~edva~~~~~l~s~  245 (264)
                      ............+   .++....+.|+.+..+........    ............... ..++.++|+|++++.++..
T Consensus       130 ~~~~~~~~~~~~~---~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~v~Dva~~~~~~l~~  204 (307)
T d1qyca_         130 FEVKAKVRRAIEA---EGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNAR-VVFVKEEDIGTFTIKAVDD  204 (307)
T ss_dssp             HHHHHHHHHHHHH---HTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCE-EEEECHHHHHHHHHTTSSC
T ss_pred             ccccccccchhhc---cCCCceecccceecCCCccchhhhhhhhhhcccceeeeccccc-ccCCcHHHHHHHHHHHhcC
Confidence            3333333333333   467888889988766533221110    000000111111122 4578999999999998853

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=99.28  E-value=4.9e-11  Score=99.75  Aligned_cols=209  Identities=15%  Similarity=0.076  Sum_probs=121.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHH-HHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ-VKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~~i   92 (264)
                      +.|+|+||||||.||.+++++|.++|++|.++.|+.......  .......+.++++|+.|..+ ++.++       ...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~~~~~v~~~~gD~~d~~~~~~~a~-------~~~   72 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQAIPNVTLFQGPLLNNVPLMDTLF-------EGA   72 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHHTSTTEEEEESCCTTCHHHHHHHH-------TTC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhcccCCCEEEEeeCCCcHHHHHHHh-------cCC
Confidence            469999999999999999999999999999999976553221  11222368899999998654 33332       467


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCC--CCCCchhhchH
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCG--GKRRTDYHMSK  170 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~--~~~~~~y~~sK  170 (264)
                      |.++++......                  .++....+++.++    .+.+ ..++++.||......  ......|..+|
T Consensus        73 ~~~~~~~~~~~~------------------~~~~~~~~~~~aa----~~ag-v~~~v~~Ss~~~~~~~~~~~~~~~~~~k  129 (350)
T d1xgka_          73 HLAFINTTSQAG------------------DEIAIGKDLADAA----KRAG-TIQHYIYSSMPDHSLYGPWPAVPMWAPK  129 (350)
T ss_dssp             SEEEECCCSTTS------------------CHHHHHHHHHHHH----HHHS-CCSEEEEEECCCGGGTSSCCCCTTTHHH
T ss_pred             ceEEeecccccc------------------hhhhhhhHHHHHH----HHhC-CCceEEEeeccccccCCcccchhhhhhH
Confidence            888776542211                  1122223333333    3333 346777777665432  23344566677


Q ss_pred             HHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccccCCChHH-----HHhhcCCCCCC-CCCCCC-hHHHHHHHHHHh
Q 041914          171 HAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHAYGMPADE-----VEKLFEPQTPL-EGVVLR-AGHVADAVLFLA  243 (264)
Q Consensus       171 ~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~-~edva~~~~~l~  243 (264)
                      ...+.+.+       ..++....+.|+.+...............     .........+. ...+++ .+|+++++..++
T Consensus       130 ~~~~~~~~-------~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l  202 (350)
T d1xgka_         130 FTVENYVR-------QLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIF  202 (350)
T ss_dssp             HHHHHHHH-------TSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHH-------hhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHH
Confidence            66554433       23577778888876554322211111000     00000000010 011233 478999999888


Q ss_pred             CCCCCCeeccEEEecCee
Q 041914          244 CRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       244 s~~~~~~~G~~i~~dgG~  261 (264)
                      .+......|+.+.+.|..
T Consensus       203 ~~~~~~~~G~~~~~~g~~  220 (350)
T d1xgka_         203 KDGPQKWNGHRIALTFET  220 (350)
T ss_dssp             HHCHHHHTTCEEEECSEE
T ss_pred             hCChhhcCCeEEEEeCCc
Confidence            544445678889887753

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=99.20  E-value=2.3e-11  Score=99.01  Aligned_cols=129  Identities=18%  Similarity=0.087  Sum_probs=93.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +||||||+|.||.+++++|.++|.. +.+.++...                +..|++|.+.++++++..     ++|+||
T Consensus         2 KILItG~tGfiG~~l~~~L~~~g~~-v~~~~~~~~----------------~~~Dl~~~~~~~~~i~~~-----~~D~Vi   59 (298)
T d1n2sa_           2 NILLFGKTGQVGWELQRSLAPVGNL-IALDVHSKE----------------FCGDFSNPKGVAETVRKL-----RPDVIV   59 (298)
T ss_dssp             EEEEECTTSHHHHHHHHHTTTTSEE-EEECTTCSS----------------SCCCTTCHHHHHHHHHHH-----CCSEEE
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCE-EEEECCCcc----------------ccCcCCCHHHHHHHHHHc-----CCCEEE
Confidence            5899999999999999999999964 555544321                346999999999888765     689999


Q ss_pred             EcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-----------CCCCCch
Q 041914           97 SNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-----------GGKRRTD  165 (264)
Q Consensus        97 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-----------~~~~~~~  165 (264)
                      |+||.....  .    ..+.-...+++|+.++..+..++    ++.  ..+++++||.....           +..+...
T Consensus        60 h~Aa~~~~~--~----~~~~~~~~~~~n~~~~~~l~~~~----~~~--~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~  127 (298)
T d1n2sa_          60 NAAAHTAVD--K----AESEPELAQLLNATSVEAIAKAA----NET--GAWVVHYSTDYVFPGTGDIPWQETDATSPLNV  127 (298)
T ss_dssp             ECCCCCCHH--H----HTTCHHHHHHHHTHHHHHHHHHH----TTT--TCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSH
T ss_pred             Eeccccccc--c----cccCccccccccccccccchhhh----hcc--ccccccccccccccCCCCCCCccccccCCCch
Confidence            999976432  1    11234667889999988888775    232  35777777775432           2235577


Q ss_pred             hhchHHHHHHHHHH
Q 041914          166 YHMSKHAVIGLVRS  179 (264)
Q Consensus       166 y~~sK~al~~~~~~  179 (264)
                      |+.+|.+.+.+.+.
T Consensus       128 y~~~k~~~e~~~~~  141 (298)
T d1n2sa_         128 YGKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHHHHHHHHHHH
T ss_pred             HhhhhhhhhhhHHh
Confidence            99999888766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=99.07  E-value=5.3e-10  Score=90.98  Aligned_cols=212  Identities=16%  Similarity=0.180  Sum_probs=121.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhh-HHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHH--hcCCcc
Q 041914           18 AIITGGASGIGETTARLFADHGA-RMIVIADIQDEL-GRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQ--NYGQLD   93 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~--~~~~id   93 (264)
                      ||||||+|.||.+++++|+++|+ .|+++.+..... ...+.   ..     ..+|..+...   .......  .+..++
T Consensus         2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~---~~-----~~~~~~~~~~---~~~~~~~~~~~~~~~   70 (307)
T d1eq2a_           2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV---DL-----NIADYMDKED---FLIQIMAGEEFGDVE   70 (307)
T ss_dssp             EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH---TS-----CCSEEEEHHH---HHHHHHTTCCCSSCC
T ss_pred             EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc---cc-----chhhhccchH---HHHHHhhhhcccchh
Confidence            79999999999999999999997 565553222211 11111   11     1122232322   2333332  335788


Q ss_pred             EEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCC-C----------CCC
Q 041914           94 IMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSC-G----------GKR  162 (264)
Q Consensus        94 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~-~----------~~~  162 (264)
                      +++|.|+......     .   ..+...+.|+.+...+.+++..    .+ . ++++.||..... +          .++
T Consensus        71 ~i~~~aa~~~~~~-----~---~~~~~~~~~~~~~~~~l~~~~~----~~-i-~~v~~ss~~~~~~~~~~~~~~~~~~~~  136 (307)
T d1eq2a_          71 AIFHEGACSSTTE-----W---DGKYMMDNNYQYSKELLHYCLE----RE-I-PFLYASSAATYGGRTSDFIESREYEKP  136 (307)
T ss_dssp             EEEECCSCCCTTC-----C---CHHHHHHHTHHHHHHHHHHHHH----HT-C-CEEEEEEGGGGTTCCSCBCSSGGGCCC
T ss_pred             hhhhhcccccccc-----c---cccccccccccccccccccccc----cc-c-ccccccccccccccccccccccccccc
Confidence            9999987544321     1   3455677778887777766533    22 2 344444444332 1          345


Q ss_pred             CchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCcccccc--cCCChHHHHhhcC---------CCCCCCCCCCC
Q 041914          163 RTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATPLTCHA--YGMPADEVEKLFE---------PQTPLEGVVLR  231 (264)
Q Consensus       163 ~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~~~~~~--~~~~~~~~~~~~~---------~~~~~~~~~~~  231 (264)
                      ...|+.+|.+.+.+++.+..+   .++.+..+.|..+..|.....  ...........+.         ......+.++.
T Consensus       137 ~~~Y~~~K~~~e~~~~~~~~~---~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~  213 (307)
T d1eq2a_         137 LNVYGYSKFLFDEYVRQILPE---ANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVY  213 (307)
T ss_dssp             SSHHHHHHHHHHHHHHHHGGG---CSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEE
T ss_pred             ccccccccchhhhhccccccc---cccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeee
Confidence            678999999999999888766   367778888877766532211  1111111111111         01111245778


Q ss_pred             hHHHHHHHHHHhCCCCCCeeccEEEecCee
Q 041914          232 AGHVADAVLFLACRDSEFVTGHDLVVDGGF  261 (264)
Q Consensus       232 ~edva~~~~~l~s~~~~~~~G~~i~~dgG~  261 (264)
                      ++|++.++..++....    ...+++.+|.
T Consensus       214 v~d~~~~~~~~~~~~~----~~~~~~~~~~  239 (307)
T d1eq2a_         214 VGDVADVNLWFLENGV----SGIFNLGTGR  239 (307)
T ss_dssp             HHHHHHHHHHHHHHCC----CEEEEESCSC
T ss_pred             cccHHHHHHHHhhhcc----cccccccccc
Confidence            9999999998875431    2356676654

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.76  E-value=1.8e-13  Score=105.46  Aligned_cols=169  Identities=11%  Similarity=0.041  Sum_probs=86.9

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh---CCCcE------------EEEEecCCCHHHHHHH
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI---GVGKC------------HYVHCDVTNECQVKAL   81 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~---~~~~~------------~~~~~D~s~~~~~~~~   81 (264)
                      ++.|+||+|++|+++|+.|+++|++|++..|++++..+...+..   .....            ................
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNEDAAEACDIAVLTIPWEHAIDTA   81 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEEHHHHHHHCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEeeccccccchhhhhhhheeeeccchHH
Confidence            46788888999999999999999999999888765543332221   11111            1122222222222222


Q ss_pred             HHHHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCC
Q 041914           82 VDSTVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGK  161 (264)
Q Consensus        82 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~  161 (264)
                      ....... ................               ...+..+...+.+...+.+.... ....+++.+........
T Consensus        82 ~~~~~~~-~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  144 (212)
T d1jaya_          82 RDLKNIL-REKIVVSPLVPVSRGA---------------KGFTYSSERSAAEIVAEVLESEK-VVSALHTIPAARFANLD  144 (212)
T ss_dssp             HHTHHHH-TTSEEEECCCCEECCT---------------TCCEECCSSCHHHHHHHHHTCSC-EEECCTTCCHHHHHCTT
T ss_pred             HHhhhhh-cccccccccccccccc---------------ccccccccchhhhhhhhhhhhhc-ccccceeecHHHhcCcc
Confidence            2211111 1112221111111110               00011111111222333343322 22333333333333445


Q ss_pred             CCchhhchHHHHHHHHHHHHHHhCcCCceEEEeeCCcccCc
Q 041914          162 RRTDYHMSKHAVIGLVRSASVQLGVHGIRVNCVSPHGLATP  202 (264)
Q Consensus       162 ~~~~y~~sK~al~~~~~~la~e~~~~~i~v~~v~pG~v~t~  202 (264)
                      ....|...+++....++..+.++....+.++.+.||++.+.
T Consensus       145 ~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a  185 (212)
T d1jaya_         145 EKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNS  185 (212)
T ss_dssp             CCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGH
T ss_pred             cccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHH
Confidence            55667777888788888888887777788899999988754

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=98.00  E-value=3.4e-05  Score=57.44  Aligned_cols=86  Identities=14%  Similarity=0.219  Sum_probs=61.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEE-ecCchhhHH--HHHhhhC-CCcEEEEEecCCCHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVI-ADIQDELGR--QVATSIG-VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~-~~~~~~~~~--~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ..++++|+|+|.|+ ||.|++++..|.+.|.+.+.+ .|+.+...+  .+.+... .........|+.+.+++.....  
T Consensus        13 ~~~l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~--   89 (182)
T d1vi2a1          13 GFDIKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA--   89 (182)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH--
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc--
Confidence            45789999999998 799999999999999975544 555443332  2222221 1234566789999887766654  


Q ss_pred             HHhcCCccEEEEcCCCCC
Q 041914           86 VQNYGQLDIMFSNAGILS  103 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~  103 (264)
                           ..|++||+.....
T Consensus        90 -----~~diiIN~Tp~G~  102 (182)
T d1vi2a1          90 -----SADILTNGTKVGM  102 (182)
T ss_dssp             -----TCSEEEECSSTTS
T ss_pred             -----ccceeccccCCcc
Confidence                 7899999987653

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.98  E-value=2.5e-05  Score=56.87  Aligned_cols=75  Identities=21%  Similarity=0.370  Sum_probs=52.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQ   91 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~   91 (264)
                      +++++++||.|+ |++|..+++.|...|++-+.+..+..+..+.+......   ..+.  +   +++.+.+.       .
T Consensus        21 ~l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~---~~~~--~---~~~~~~l~-------~   84 (159)
T d1gpja2          21 SLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG---EAVR--F---DELVDHLA-------R   84 (159)
T ss_dssp             CCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC---EECC--G---GGHHHHHH-------T
T ss_pred             CcccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc---cccc--c---hhHHHHhc-------c
Confidence            689999999998 99999999999999997566666655555555555432   2222  2   23333333       6


Q ss_pred             ccEEEEcCCCC
Q 041914           92 LDIMFSNAGIL  102 (264)
Q Consensus        92 id~lv~~ag~~  102 (264)
                      .|++|++.+..
T Consensus        85 ~Divi~atss~   95 (159)
T d1gpja2          85 SDVVVSATAAP   95 (159)
T ss_dssp             CSEEEECCSSS
T ss_pred             CCEEEEecCCC
Confidence            89999998754

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=97.93  E-value=1.9e-05  Score=58.50  Aligned_cols=107  Identities=12%  Similarity=0.170  Sum_probs=66.4

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .+|.+|||+||+||+|...++-....|++|+.+++++++... + +....+.  .+  |-.+.  ..+....+  .-+++
T Consensus        30 ~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~-~-~~lGa~~--vi--~~~~~--~~~~~~~~--~~~gv   99 (176)
T d1xa0a2          30 PERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDY-L-RVLGAKE--VL--AREDV--MAERIRPL--DKQRW   99 (176)
T ss_dssp             GGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHH-H-HHTTCSE--EE--ECC-----------C--CSCCE
T ss_pred             CCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHH-H-Hhcccce--ee--ecchh--HHHHHHHh--hccCc
Confidence            358899999999999999998888899999988887776422 2 2233222  22  32221  11111111  12479


Q ss_pred             cEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCC
Q 041914           93 DIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGG  160 (264)
Q Consensus        93 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~  160 (264)
                      |+++.+.|...                            ....+..|+.   .|+++.++...+..+.
T Consensus       100 D~vid~vgg~~----------------------------~~~~l~~l~~---~Griv~~G~~~g~~~~  136 (176)
T d1xa0a2         100 AAAVDPVGGRT----------------------------LATVLSRMRY---GGAVAVSGLTGGAEVP  136 (176)
T ss_dssp             EEEEECSTTTT----------------------------HHHHHHTEEE---EEEEEECSCCSSSCCC
T ss_pred             CEEEEcCCchh----------------------------HHHHHHHhCC---CceEEEeecccCcccC
Confidence            99999987321                            1233444554   6899999988666543

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=97.84  E-value=2e-05  Score=58.75  Aligned_cols=79  Identities=13%  Similarity=0.283  Sum_probs=52.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.++||+||+|++|...++-....|++|+.+.+++++. +.+.+. ...  +.+  |..+++..+...+...  ..++|
T Consensus        29 ~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~-~~~~~~-Ga~--~vi--~~~~~~~~~~~~~~~~--~~Gvd  100 (182)
T d1v3va2          29 GGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKI-AYLKQI-GFD--AAF--NYKTVNSLEEALKKAS--PDGYD  100 (182)
T ss_dssp             SSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHHHT-TCS--EEE--ETTSCSCHHHHHHHHC--TTCEE
T ss_pred             CCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHH-HHHHhh-hhh--hhc--ccccccHHHHHHHHhh--cCCCc
Confidence            489999999999999999988888999998888876543 333222 221  222  3343333333333222  13699


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       101 ~v~D~vG  107 (182)
T d1v3va2         101 CYFDNVG  107 (182)
T ss_dssp             EEEESSC
T ss_pred             eeEEecC
Confidence            9999987

>d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB)
species: Escherichia coli [TaxId: 562]

Probab=97.82  E-value=2.3e-05  Score=60.33  Aligned_cols=81  Identities=22%  Similarity=0.229  Sum_probs=57.4

Q ss_pred             ccCCCcEEEEeCCC----------------ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC
Q 041914           11 NKLEGKVAIITGGA----------------SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN   74 (264)
Q Consensus        11 ~~l~~k~vlItGas----------------~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~   74 (264)
                      .||+|+++|||+|.                |.+|.+||+++..+|++|.+++.......        ...+..+  .+.+
T Consensus         2 ~dl~g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~--------p~~~~~~--~~~t   71 (223)
T d1u7za_           2 NDLKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPT--------PPFVKRV--DVMT   71 (223)
T ss_dssp             CTTTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCC--------CTTEEEE--ECCS
T ss_pred             cccCCCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCc--------ccccccc--eehh
Confidence            47999999999875                89999999999999999999887654210        0123333  3444


Q ss_pred             HHHHHHHHHHHHHhcCCccEEEEcCCCCCC
Q 041914           75 ECQVKALVDSTVQNYGQLDIMFSNAGILSS  104 (264)
Q Consensus        75 ~~~~~~~~~~~~~~~~~id~lv~~ag~~~~  104 (264)
                      .++....+.   +.+...|++|++|++...
T Consensus        72 ~~~m~~~~~---~~~~~~D~~i~aAAvsDf   98 (223)
T d1u7za_          72 ALEMEAAVN---ASVQQQNIFIGCAAVADY   98 (223)
T ss_dssp             HHHHHHHHH---HHGGGCSEEEECCBCCSE
T ss_pred             hHHHHHHHH---hhhccceeEeeeechhhh
Confidence            444444443   334467999999998764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=4.4e-05  Score=56.30  Aligned_cols=79  Identities=13%  Similarity=0.257  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+|||+||+|++|...++.....|++|+++.+++++. +.+. ....+.  +  .|.++.+-.+++.+....  ..+|
T Consensus        28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~-~~~~-~~Ga~~--v--i~~~~~~~~~~i~~~t~~--~g~d   99 (174)
T d1yb5a2          28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQ-KIVL-QNGAHE--V--FNHREVNYIDKIKKYVGE--KGID   99 (174)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHH-HHHH-HTTCSE--E--EETTSTTHHHHHHHHHCT--TCEE
T ss_pred             CCCEEEEEeccccccccccccccccCccccccccccccc-cccc-ccCccc--c--cccccccHHHHhhhhhcc--CCce
Confidence            589999999999999999998888999988888765433 3333 233222  2  366665433333332221  2589


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (174)
T d1yb5a2         100 IIIEMLA  106 (174)
T ss_dssp             EEEESCH
T ss_pred             EEeeccc
Confidence            9998865

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.69  E-value=4.8e-05  Score=56.47  Aligned_cols=77  Identities=17%  Similarity=0.249  Sum_probs=52.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|.++||+||+|++|...++.+...|++|+++.+++++. +.+.+ ....  +.  .|..+++-    .+++++..  .+
T Consensus        25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~-~~l~~-~Ga~--~v--i~~~~~~~----~~~v~~~t~~~g   94 (183)
T d1pqwa_          25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKR-EMLSR-LGVE--YV--GDSRSVDF----ADEILELTDGYG   94 (183)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHH-HHHHT-TCCS--EE--EETTCSTH----HHHHHHHTTTCC
T ss_pred             CCCEEEEECCCCCcccccchhhccccccceeeecccccc-ccccc-cccc--cc--ccCCccCH----HHHHHHHhCCCC
Confidence            478999999999999999998888899988888876543 33332 2222  22  34455433    33344432  36


Q ss_pred             ccEEEEcCC
Q 041914           92 LDIMFSNAG  100 (264)
Q Consensus        92 id~lv~~ag  100 (264)
                      +|+++.+.|
T Consensus        95 ~d~v~d~~g  103 (183)
T d1pqwa_          95 VDVVLNSLA  103 (183)
T ss_dssp             EEEEEECCC
T ss_pred             EEEEEeccc
Confidence            999999887

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=97.68  E-value=5.4e-05  Score=55.99  Aligned_cols=79  Identities=15%  Similarity=0.241  Sum_probs=53.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|...++-....|++|+++.+++++.. .+.+. ...  ++  .|.++++-.+++.+..  .-..+|
T Consensus        28 ~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~-~~~~l-Ga~--~v--i~~~~~d~~~~v~~~t--~g~g~d   99 (179)
T d1qora2          28 PDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQ-SALKA-GAW--QV--INYREEDLVERLKEIT--GGKKVR   99 (179)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHH-HHHHH-TCS--EE--EETTTSCHHHHHHHHT--TTCCEE
T ss_pred             CCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHH-HHHhc-CCe--EE--EECCCCCHHHHHHHHh--CCCCeE
Confidence            4899999999999999999888889999888888776653 33322 222  22  3666654333332211  113689


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus       100 ~v~d~~g  106 (179)
T d1qora2         100 VVYDSVG  106 (179)
T ss_dssp             EEEECSC
T ss_pred             EEEeCcc
Confidence            9998876

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.67  E-value=8.9e-05  Score=54.42  Aligned_cols=79  Identities=10%  Similarity=0.112  Sum_probs=53.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..+++||++||.|+ ||.+++++..|.+.|.++.++.|+.++. +.+.+... ...+..+..|  +.            .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka-~~l~~~~~~~~~~~~~~~~--~~------------~   76 (170)
T d1nyta1          13 SFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRA-EELAKLFAHTGSIQALSMD--EL------------E   76 (170)
T ss_dssp             TCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHH-HHHHHHTGGGSSEEECCSG--GG------------T
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHH-HHHHHHHhhcccccccccc--cc------------c
Confidence            45688999999997 8899999999999999966666665544 44444433 2333333322  10            1


Q ss_pred             cCCccEEEEcCCCCCC
Q 041914           89 YGQLDIMFSNAGILSS  104 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~  104 (264)
                      ....|++||+......
T Consensus        77 ~~~~dliIN~Tp~G~~   92 (170)
T d1nyta1          77 GHEFDLIINATSSGIS   92 (170)
T ss_dssp             TCCCSEEEECCSCGGG
T ss_pred             ccccceeecccccCcc
Confidence            1368999999876543

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.66  E-value=0.00014  Score=53.31  Aligned_cols=75  Identities=16%  Similarity=0.301  Sum_probs=51.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .+|+++|.|| |.+|+.+|+.|+++|++|+++.|+.+.. +.+.+...  .......+..+.......+.       ..|
T Consensus         1 ~~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a-~~l~~~~~--~~~~~~~~~~~~~~~~~~i~-------~~~   69 (182)
T d1e5qa1           1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESA-KKLSAGVQ--HSTPISLDVNDDAALDAEVA-------KHD   69 (182)
T ss_dssp             CCCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHH-HHHHTTCT--TEEEEECCTTCHHHHHHHHT-------TSS
T ss_pred             CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHH-HHHHhccc--ccccccccccchhhhHhhhh-------ccc
Confidence            3689999987 9999999999999999977777766544 44444332  34445566666666655553       557


Q ss_pred             EEEEcC
Q 041914           94 IMFSNA   99 (264)
Q Consensus        94 ~lv~~a   99 (264)
                      .++...
T Consensus        70 ~~i~~~   75 (182)
T d1e5qa1          70 LVISLI   75 (182)
T ss_dssp             EEEECS
T ss_pred             eeEeec
Confidence            776544

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=97.60  E-value=0.0002  Score=52.49  Aligned_cols=79  Identities=11%  Similarity=0.130  Sum_probs=53.9

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ..++++|+++|.|+ ||.+++++..|.+.+.++.++.|+.++. +.+.+... ...+..+..|-.              .
T Consensus        13 ~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a-~~l~~~~~~~~~~~~~~~~~~--------------~   76 (171)
T d1p77a1          13 NWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKT-KELAERFQPYGNIQAVSMDSI--------------P   76 (171)
T ss_dssp             TCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHH-HHHHHHHGGGSCEEEEEGGGC--------------C
T ss_pred             CCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHH-HHHHHHHhhccccchhhhccc--------------c
Confidence            45688999999976 8889999999999888877777776554 44444433 245555555422              1


Q ss_pred             cCCccEEEEcCCCCCC
Q 041914           89 YGQLDIMFSNAGILSS  104 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~  104 (264)
                      ....|++||+......
T Consensus        77 ~~~~diiIN~tp~g~~   92 (171)
T d1p77a1          77 LQTYDLVINATSAGLS   92 (171)
T ss_dssp             CSCCSEEEECCCC---
T ss_pred             ccccceeeeccccccc
Confidence            2478999999886643

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=97.53  E-value=4.7e-05  Score=56.99  Aligned_cols=84  Identities=19%  Similarity=0.282  Sum_probs=50.8

Q ss_pred             CcEEEE-eCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHH--hhhCCCcEEEEEecCCCHHHHHHHHHHHHH-hcC
Q 041914           15 GKVAII-TGGASGIGETTARLFADHGARMIVIADIQDELGRQVA--TSIGVGKCHYVHCDVTNECQVKALVDSTVQ-NYG   90 (264)
Q Consensus        15 ~k~vlI-tGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~-~~~   90 (264)
                      |.+++| +||+|++|...++-....|++|+.+.++.+...+...  ..+..+  +.+..|-.+..+....+.++.+ ..+
T Consensus        29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~lGad--~vi~~~~~~~~~~~~~v~~~~~~~g~  106 (189)
T d1gu7a2          29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT--QVITEDQNNSREFGPTIKEWIKQSGG  106 (189)
T ss_dssp             TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHHTCS--EEEEHHHHHCGGGHHHHHHHHHHHTC
T ss_pred             CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhcccc--EEEeccccchhHHHHHHHHHHhhccC
Confidence            455555 7999999999998777789999988887665433322  222222  2333322222233333444433 335


Q ss_pred             CccEEEEcCC
Q 041914           91 QLDIMFSNAG  100 (264)
Q Consensus        91 ~id~lv~~ag  100 (264)
                      ++|+++.+.|
T Consensus       107 ~vdvv~D~vg  116 (189)
T d1gu7a2         107 EAKLALNCVG  116 (189)
T ss_dssp             CEEEEEESSC
T ss_pred             CceEEEECCC
Confidence            7999998865

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.49  E-value=0.00013  Score=54.42  Aligned_cols=79  Identities=16%  Similarity=0.255  Sum_probs=50.7

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccE
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDI   94 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~   94 (264)
                      +++|||+||+||+|...++-....|+++++.....++....+......+    ...|..+++ ..+.+.++..  ..+|+
T Consensus        31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad----~vi~~~~~~-~~~~~~~~~~--~GvDv  103 (187)
T d1vj1a2          31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFD----AAVNYKTGN-VAEQLREACP--GGVDV  103 (187)
T ss_dssp             CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCS----EEEETTSSC-HHHHHHHHCT--TCEEE
T ss_pred             CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccce----EEeeccchh-HHHHHHHHhc--cCceE
Confidence            4899999999999999997777789987766555544444444444432    222444432 2222333322  36999


Q ss_pred             EEEcCC
Q 041914           95 MFSNAG  100 (264)
Q Consensus        95 lv~~ag  100 (264)
                      ++.+.|
T Consensus       104 v~D~vG  109 (187)
T d1vj1a2         104 YFDNVG  109 (187)
T ss_dssp             EEESSC
T ss_pred             EEecCC
Confidence            998886

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.46  E-value=0.00013  Score=47.85  Aligned_cols=77  Identities=16%  Similarity=0.199  Sum_probs=50.7

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      .+++||+++|.|. |..|.++++.|.++|++|.+..++..+....   .... ...++..+.. ..    .+       .
T Consensus         1 ~~~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~---~~~~-~~~~~~~~~~-~~----~~-------~   63 (93)
T d2jfga1           1 ADYQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLD---KLPE-AVERHTGSLN-DE----WL-------M   63 (93)
T ss_dssp             CCCTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGG---GSCT-TSCEEESBCC-HH----HH-------H
T ss_pred             CCcCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHH---HHhh-ccceeecccc-hh----hh-------c
Confidence            3689999999998 7789999999999999988887765433221   1111 1222222322 11    11       2


Q ss_pred             CccEEEEcCCCCCC
Q 041914           91 QLDIMFSNAGILSS  104 (264)
Q Consensus        91 ~id~lv~~ag~~~~  104 (264)
                      .+|.+|..+|+...
T Consensus        64 ~~d~vi~SPGi~~~   77 (93)
T d2jfga1          64 AADLIVASPGIALA   77 (93)
T ss_dssp             HCSEEEECTTSCTT
T ss_pred             cCCEEEECCCCCCC
Confidence            57999999998543

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=97.46  E-value=0.00039  Score=50.67  Aligned_cols=82  Identities=15%  Similarity=0.190  Sum_probs=52.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~i   92 (264)
                      .|.+++|+| +|++|...++.+...|++|+++.+++++. +...+ +..+.  .+..|-. .++.....+++.+.. +.+
T Consensus        26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~-~~a~~-~ga~~--~~~~~~~-~~~~~~~~~~~~~~~g~g~   99 (170)
T d1e3ja2          26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRL-EVAKN-CGADV--TLVVDPA-KEEESSIIERIRSAIGDLP   99 (170)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHH-TTCSE--EEECCTT-TSCHHHHHHHHHHHSSSCC
T ss_pred             CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHH-HHHHH-cCCcE--EEecccc-ccccchhhhhhhcccccCC
Confidence            578999997 68999999998888999988777766654 33322 22222  2222322 222344445555554 469


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.++|.
T Consensus       100 D~vid~~g~  108 (170)
T d1e3ja2         100 NVTIDCSGN  108 (170)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeecCCC
Confidence            999999874

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=97.42  E-value=0.00017  Score=45.27  Aligned_cols=40  Identities=18%  Similarity=0.407  Sum_probs=34.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      -++.++||+||+||+|....+.+...|++|+.+++++++.
T Consensus        30 ~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~   69 (77)
T d1o8ca2          30 PQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (77)
T ss_dssp             GGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             cCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHH
Confidence            3688999999999999999998888899998888877654

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=97.40  E-value=0.00032  Score=51.16  Aligned_cols=81  Identities=12%  Similarity=0.213  Sum_probs=50.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+++|+|++|++|...++.+...|...+++....++..+.+.+. ...  +.+  |.++.+..++..+...  -+.+|
T Consensus        27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~-Ga~--~~i--~~~~~~~~~~~~~~~~--~~~~d   99 (170)
T d1jvba2          27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRA-GAD--YVI--NASMQDPLAEIRRITE--SKGVD   99 (170)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHH-TCS--EEE--ETTTSCHHHHHHHHTT--TSCEE
T ss_pred             CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHc-CCc--eee--ccCCcCHHHHHHHHhh--cccch
Confidence            5789999999999999999999989975455555444443443332 221  233  3444333333332221  13589


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       100 ~vid~~g~  107 (170)
T d1jvba2         100 AVIDLNNS  107 (170)
T ss_dssp             EEEESCCC
T ss_pred             hhhccccc
Confidence            99999874

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.37  E-value=0.00072  Score=45.75  Aligned_cols=47  Identities=28%  Similarity=0.272  Sum_probs=38.3

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHH
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQV   56 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~   56 (264)
                      -..+++||++||.|+ |.+|..-++.|.+.|++|++++....+....+
T Consensus         6 i~l~l~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~   52 (113)
T d1pjqa1           6 IFCQLRDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVW   52 (113)
T ss_dssp             EEECCBTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHH
T ss_pred             eEEEeCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHH
Confidence            345799999999998 45999999999999999888887665544443

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=97.31  E-value=0.0011  Score=48.51  Aligned_cols=78  Identities=15%  Similarity=0.208  Sum_probs=52.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc-CCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY-GQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~-~~i   92 (264)
                      .|.+++|.|+ |++|...++.+...|+.++++.+..+...+..++. ...  +++  |..+++ +   .+++++.. +++
T Consensus        28 ~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~-Ga~--~~i--~~~~~~-~---~~~i~~~t~gg~   97 (174)
T d1f8fa2          28 PASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GAT--HVI--NSKTQD-P---VAAIKEITDGGV   97 (174)
T ss_dssp             TTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-TCS--EEE--ETTTSC-H---HHHHHHHTTSCE
T ss_pred             CCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHc-CCe--EEE--eCCCcC-H---HHHHHHHcCCCC
Confidence            5889999987 89999999888888999888777666554544433 222  233  444432 2   23333322 579


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.+.|.
T Consensus        98 D~vid~~G~  106 (174)
T d1f8fa2          98 NFALESTGS  106 (174)
T ss_dssp             EEEEECSCC
T ss_pred             cEEEEcCCc
Confidence            999999874

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.30  E-value=0.00038  Score=48.56  Aligned_cols=71  Identities=18%  Similarity=0.251  Sum_probs=53.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      +++|.|+ |.+|+.+++.|.++|++|+++..+++.. +.+.+..   ...++..|.+|++.++++-      ....|.++
T Consensus         2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~-~~~~~~~---~~~vi~Gd~~~~~~l~~~~------i~~a~~vv   70 (132)
T d1lssa_           2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDIC-KKASAEI---DALVINGDCTKIKTLEDAG------IEDADMYI   70 (132)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHC---SSEEEESCTTSHHHHHHTT------TTTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhh-hhhhhhh---hhhhccCcccchhhhhhcC------hhhhhhhc
Confidence            5788887 9999999999999999988887765544 3343332   3568889999998777651      13678887


Q ss_pred             Ec
Q 041914           97 SN   98 (264)
Q Consensus        97 ~~   98 (264)
                      ..
T Consensus        71 ~~   72 (132)
T d1lssa_          71 AV   72 (132)
T ss_dssp             EC
T ss_pred             cc
Confidence            64

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.30  E-value=0.00042  Score=50.69  Aligned_cols=74  Identities=16%  Similarity=0.349  Sum_probs=49.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|+++||+||+|++|...++.....|++|+.+.+++++. +.+.+ +..+.  .+  |..+.      .+++. ...++|
T Consensus        27 ~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~-~~~~~-lGa~~--~i--~~~~~------~~~~~-~~~g~D   93 (171)
T d1iz0a2          27 PGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKL-ALPLA-LGAEE--AA--TYAEV------PERAK-AWGGLD   93 (171)
T ss_dssp             TTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGS-HHHHH-TTCSE--EE--EGGGH------HHHHH-HTTSEE
T ss_pred             CCCEEEEEeccccchhhhhhhhccccccccccccccccc-ccccc-cccce--ee--ehhhh------hhhhh-cccccc
Confidence            689999999999999999988888899988888776544 33322 22222  22  33322      12222 234799


Q ss_pred             EEEEcCC
Q 041914           94 IMFSNAG  100 (264)
Q Consensus        94 ~lv~~ag  100 (264)
                      +++.+.|
T Consensus        94 ~v~d~~G  100 (171)
T d1iz0a2          94 LVLEVRG  100 (171)
T ss_dssp             EEEECSC
T ss_pred             ccccccc
Confidence            9998765

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.27  E-value=0.0018  Score=47.06  Aligned_cols=82  Identities=16%  Similarity=0.242  Sum_probs=50.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+++|.|+ |++|...++.+...|++.+++....++..+..+ .+..  -+++..+-.+.....+.++....  ..+|
T Consensus        26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga--~~~~~~~~~~~~~~~~~~~~~~g--~g~D   99 (171)
T d1pl8a2          26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGA--DLVLQISKESPQEIARKVEGQLG--CKPE   99 (171)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTC--SEEEECSSCCHHHHHHHHHHHHT--SCCS
T ss_pred             CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCC--cccccccccccccccccccccCC--CCce
Confidence            4789999986 999999999998899953444444444333333 3322  23444444555554444443321  3789


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       100 vvid~~G~  107 (171)
T d1pl8a2         100 VTIECTGA  107 (171)
T ss_dssp             EEEECSCC
T ss_pred             EEEeccCC
Confidence            99999874

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=97.26  E-value=0.0028  Score=44.85  Aligned_cols=111  Identities=14%  Similarity=0.226  Sum_probs=62.8

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           15 GKVAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+++.|.|+ |.+|..+|..|+.+|  .+++++.++++.......+...    .........|..              .
T Consensus         5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~~d~~--------------~   69 (146)
T d1ez4a1           5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYS--------------D   69 (146)
T ss_dssp             BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEECCGG--------------G
T ss_pred             CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEeeccHH--------------H
Confidence            568888895 999999999999987  4655555554333222222211    123334444431              1


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      ..+-|++|.++|.....        .+.-.+.+..|+    .+++...+.+.+..+++.++++|
T Consensus        70 ~~~adivvitag~~~~~--------g~~r~~l~~~N~----~i~~~~~~~i~~~~p~aivivvt  121 (146)
T d1ez4a1          70 CKDADLVVITAGAPQKP--------GESRLDLVNKNL----NILSSIVKPVVDSGFDGIFLVAA  121 (146)
T ss_dssp             GTTCSEEEECCCC------------------CHHHHH----HHHHHHHHHHHHTTCCSEEEECS
T ss_pred             hccccEEEEecccccCC--------CCCHHHHHHHHH----HHHHHHHHHHhhcCCCcEEEEeC
Confidence            23679999999864322        122344455554    45666666677766567777665

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=97.20  E-value=0.0014  Score=48.24  Aligned_cols=80  Identities=21%  Similarity=0.305  Sum_probs=48.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--C
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--G   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~   90 (264)
                      .|.++||+|+ |++|...++.+...|+ +|+++.+++++. +.+ +.+...  +++  |.++. +..+..+++.+..  .
T Consensus        28 ~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~-~~a-~~lGa~--~vi--~~~~~-~~~~~~~~i~~~~~~~   99 (182)
T d1vj0a2          28 AGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL-KLA-EEIGAD--LTL--NRRET-SVEERRKAIMDITHGR   99 (182)
T ss_dssp             BTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHH-HHH-HHTTCS--EEE--ETTTS-CHHHHHHHHHHHTTTS
T ss_pred             CCCEEEEECC-Cccchhheecccccccccccccccccccc-ccc-ccccce--EEE--ecccc-chHHHHHHHHHhhCCC
Confidence            5899999987 8999999988888998 556666655543 333 233221  233  33322 1222233344332  2


Q ss_pred             CccEEEEcCCC
Q 041914           91 QLDIMFSNAGI  101 (264)
Q Consensus        91 ~id~lv~~ag~  101 (264)
                      .+|++|.+.|.
T Consensus       100 g~Dvvid~vG~  110 (182)
T d1vj0a2         100 GADFILEATGD  110 (182)
T ss_dssp             CEEEEEECSSC
T ss_pred             CceEEeecCCc
Confidence            59999999875

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.04  E-value=0.0034  Score=44.25  Aligned_cols=117  Identities=17%  Similarity=0.188  Sum_probs=65.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++.|+||+|.+|.+++..|+.+|. +-+++.+..+...+. .+......+.....-+. ..+....+       .+-|++
T Consensus         2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a-~Dl~~~~~~~~~~~~~~-~~~~~~~~-------~~aDiv   72 (144)
T d1mlda1           2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVA-ADLSHIETRATVKGYLG-PEQLPDCL-------KGCDVV   72 (144)
T ss_dssp             EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHH-HHHTTSSSSCEEEEEES-GGGHHHHH-------TTCSEE
T ss_pred             eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhh-HHHhhhhhhcCCCeEEc-CCChHHHh-------CCCCEE
Confidence            578999999999999999998876 434444444433222 22222211111111121 22222222       268999


Q ss_pred             EEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCC
Q 041914           96 FSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASV  154 (264)
Q Consensus        96 v~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~  154 (264)
                      |..+|......     .+   -.+.++.|+.    +++.+.+.+.+...++.++++|.-
T Consensus        73 Vitag~~~~~g-----~s---R~~ll~~N~~----i~~~i~~~i~~~~p~~iiivvtNP  119 (144)
T d1mlda1          73 VIPAGVPRKPG-----MT---RDDLFNTNAT----IVATLTAACAQHCPDAMICIISNP  119 (144)
T ss_dssp             EECCSCCCCTT-----CC---GGGGHHHHHH----HHHHHHHHHHHHCTTSEEEECSSC
T ss_pred             EECCCcCCCCC-----CC---cchHHHHHHH----HHHHHHHHHHhcCCCeEEEEecCc
Confidence            99999643221     12   2334555554    455666666666556778877643

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=96.99  E-value=0.00072  Score=49.55  Aligned_cols=78  Identities=14%  Similarity=0.082  Sum_probs=46.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc--CC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY--GQ   91 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~--~~   91 (264)
                      .|.+|+|.|+ |++|...++.+...|+..+++....++..+...+ +..  .+++  |..+.+..    +++.+..  ..
T Consensus        27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~-lGa--~~~i--~~~~~~~~----~~v~~~t~g~G   96 (174)
T d1jqba2          27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF-YGA--TDIL--NYKNGHIE----DQVMKLTNGKG   96 (174)
T ss_dssp             TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH-HTC--SEEE--CGGGSCHH----HHHHHHTTTSC
T ss_pred             CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh-hCc--cccc--cccchhHH----HHHHHHhhccC
Confidence            4789999976 8999999988888898534444444443333332 322  1233  44433222    2333322  25


Q ss_pred             ccEEEEcCCC
Q 041914           92 LDIMFSNAGI  101 (264)
Q Consensus        92 id~lv~~ag~  101 (264)
                      +|++|.++|.
T Consensus        97 ~D~vid~~g~  106 (174)
T d1jqba2          97 VDRVIMAGGG  106 (174)
T ss_dssp             EEEEEECSSC
T ss_pred             cceEEEccCC
Confidence            9999999885

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.96  E-value=0.0011  Score=48.38  Aligned_cols=80  Identities=19%  Similarity=0.252  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~i   92 (264)
                      .|.+|||.|+ +|+|...++.+...|+.++++.++.++..+..+ .+...  +++  |..+ .+.+.+.+....  .+.+
T Consensus        28 ~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~--~~i--~~~~~~~~~~~~~~~~~--~~g~   99 (176)
T d2fzwa2          28 PGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGAT--ECI--NPQDFSKPIQEVLIEMT--DGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCS--EEE--CGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCc--EEE--eCCchhhHHHHHHHHHc--CCCC
Confidence            5889999997 599999999999999887777766665544433 33322  223  2221 122333333332  2479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2fzwa2         100 DYSFECIGN  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             cEeeecCCC
Confidence            999999873

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=96.93  E-value=0.0012  Score=48.17  Aligned_cols=80  Identities=19%  Similarity=0.280  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCC-HHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTN-ECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~-~~~~~~~~~~~~~~~~~i   92 (264)
                      .|.+|||.|+ +|+|...+..+...|+..+++...+++..+...+. ...  +.+  |..+ .+.+....+...  .+.+
T Consensus        28 ~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~-Ga~--~~i--~~~~~~~~~~~~~~~~~--~~G~   99 (176)
T d2jhfa2          28 QGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-GAT--ECV--NPQDYKKPIQEVLTEMS--NGGV   99 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-TCS--EEE--CGGGCSSCHHHHHHHHT--TSCB
T ss_pred             CCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHh-CCe--eEE--ecCCchhHHHHHHHHHh--cCCC
Confidence            5889999999 78999999999999976555555555444433333 221  122  2221 122333333332  2479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|-+.|.
T Consensus       100 D~vid~~G~  108 (176)
T d2jhfa2         100 DFSFEVIGR  108 (176)
T ss_dssp             SEEEECSCC
T ss_pred             CEEEecCCc
Confidence            999999874

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=96.86  E-value=0.0026  Score=45.99  Aligned_cols=74  Identities=16%  Similarity=0.318  Sum_probs=50.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+|+|.|+ |++|...++.+...|++++++.+++++. +.. +.+..+  ++  .|..+.+....       ....+|
T Consensus        30 ~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~-~~a-~~lGad--~~--i~~~~~~~~~~-------~~~~~D   95 (168)
T d1uufa2          30 PGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKR-EAA-KALGAD--EV--VNSRNADEMAA-------HLKSFD   95 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGH-HHH-HHHTCS--EE--EETTCHHHHHT-------TTTCEE
T ss_pred             CCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHH-HHH-hccCCc--EE--EECchhhHHHH-------hcCCCc
Confidence            5899999986 9999999988888899988877766654 322 333332  22  35555543321       224799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.+.|.
T Consensus        96 ~vid~~g~  103 (168)
T d1uufa2          96 FILNTVAA  103 (168)
T ss_dssp             EEEECCSS
T ss_pred             eeeeeeec
Confidence            99999875

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=96.85  E-value=0.0018  Score=47.02  Aligned_cols=70  Identities=20%  Similarity=0.319  Sum_probs=45.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      ++|+|+|.|+ ||.+++++..|.+.|.+-+.+..|..+..+.+.+....   ..+  +-.+              ....|
T Consensus        16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~---~~~--~~~~--------------~~~~D   75 (167)
T d1npya1          16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGY---AYI--NSLE--------------NQQAD   75 (167)
T ss_dssp             TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTC---EEE--SCCT--------------TCCCS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhh---hhh--hccc--------------ccchh
Confidence            5788999987 99999999999999975344444444444555544432   111  1100              13579


Q ss_pred             EEEEcCCCCC
Q 041914           94 IMFSNAGILS  103 (264)
Q Consensus        94 ~lv~~ag~~~  103 (264)
                      ++||+..+.-
T Consensus        76 liINaTpiGm   85 (167)
T d1npya1          76 ILVNVTSIGM   85 (167)
T ss_dssp             EEEECSSTTC
T ss_pred             hheeccccCC
Confidence            9999987653

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=96.81  E-value=0.0012  Score=45.84  Aligned_cols=73  Identities=15%  Similarity=0.234  Sum_probs=50.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |+++|.|. |-+|+.+++.|.+.|.+|+++..+++.. +.+.+.    ....+..|.++++.+.++-  +    .+.|.+
T Consensus         1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~-~~~~~~----~~~~~~gd~~~~~~l~~a~--i----~~a~~v   68 (134)
T d2hmva1           1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKV-NAYASY----ATHAVIANATEENELLSLG--I----RNFEYV   68 (134)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHH-HHTTTT----CSEEEECCTTCTTHHHHHT--G----GGCSEE
T ss_pred             CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHH-HHHHHh----CCcceeeecccchhhhccC--C----ccccEE
Confidence            56778866 8999999999999999987777755443 333222    2356778999987776541  1    256877


Q ss_pred             EEcCC
Q 041914           96 FSNAG  100 (264)
Q Consensus        96 v~~ag  100 (264)
                      |...+
T Consensus        69 i~~~~   73 (134)
T d2hmva1          69 IVAIG   73 (134)
T ss_dssp             EECCC
T ss_pred             EEEcC
Confidence            76543

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=96.81  E-value=0.01  Score=41.83  Aligned_cols=114  Identities=13%  Similarity=0.159  Sum_probs=65.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhC-----CCcEEEEEecCCCHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIG-----VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      -.++++.|+|+ |.+|.+++..|+.+|.  +++++...++.......+..+     .........|..            
T Consensus         4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~~------------   70 (148)
T d1ldna1           4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDYD------------   70 (148)
T ss_dssp             TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCGG------------
T ss_pred             CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCHH------------
Confidence            45678899996 9999999999999875  455555444333222222211     122333333321            


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                        ...+-|++|.++|......     .+   -.+.+..|    ..+++.+.+.+.+..+.+.++++|.
T Consensus        71 --~l~daDvvvitag~~~~~~-----~~---R~dl~~~N----~~i~~~i~~~i~~~~p~a~~ivvtN  124 (148)
T d1ldna1          71 --DCRDADLVVICAGANQKPG-----ET---RLDLVDKN----IAIFRSIVESVMASGFQGLFLVATN  124 (148)
T ss_dssp             --GTTTCSEEEECCSCCCCTT-----TC---SGGGHHHH----HHHHHHHHHHHHHHTCCSEEEECSS
T ss_pred             --HhccceeEEEecccccccC-----cc---hhHHHHHH----HHHHHHHHHHHHhhCCCceEEEecC
Confidence              1236799999999754321     11   12233344    3455666666666555677777653

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=96.79  E-value=0.0024  Score=46.66  Aligned_cols=81  Identities=19%  Similarity=0.231  Sum_probs=50.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+|+|.| .|++|...++.+...|+..+++...++...+.. +.+...  ..+...-.+ +..........  .+++|
T Consensus        28 ~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~Ga~--~~i~~~~~~-~~~~~~~~~~~--~~G~d  100 (174)
T d1e3ia2          28 PGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGAT--DCLNPRELD-KPVQDVITELT--AGGVD  100 (174)
T ss_dssp             TTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCS--EEECGGGCS-SCHHHHHHHHH--TSCBS
T ss_pred             CCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHhCCC--cccCCccch-hhhhhhHhhhh--cCCCc
Confidence            578999997 599999999999999998677766666554433 333322  223221111 12232333222  25799


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|-++|.
T Consensus       101 ~vie~~G~  108 (174)
T d1e3ia2         101 YSLDCAGT  108 (174)
T ss_dssp             EEEESSCC
T ss_pred             EEEEeccc
Confidence            99999884

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=96.76  E-value=0.006  Score=43.17  Aligned_cols=82  Identities=10%  Similarity=0.080  Sum_probs=53.1

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ..=|++.|.||.|.+|..+++.|.++|++|.+..++.....+...   ....+.....+   ...+...+.++......=
T Consensus         7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~~---~~~~~v~~~~~---~~~~~~v~~~~~~~~~~~   80 (152)
T d2pv7a2           7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESIL---ANADVVIVSVP---INLTLETIERLKPYLTEN   80 (152)
T ss_dssp             TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHHH---TTCSEEEECSC---GGGHHHHHHHHGGGCCTT
T ss_pred             CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchhh---hhccccccccc---hhhheeeeecccccccCC
Confidence            345899999999999999999999999998888777665544332   22233333333   345556666665544332


Q ss_pred             cEEEEcCC
Q 041914           93 DIMFSNAG  100 (264)
Q Consensus        93 d~lv~~ag  100 (264)
                      .+++..+.
T Consensus        81 ~iiiD~~S   88 (152)
T d2pv7a2          81 MLLADLTS   88 (152)
T ss_dssp             SEEEECCS
T ss_pred             ceEEEecc
Confidence            34554443

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=96.74  E-value=0.00099  Score=48.44  Aligned_cols=39  Identities=15%  Similarity=0.394  Sum_probs=33.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ++.+|||+||+||+|...++-....|++|+.+.+++++.
T Consensus        23 ~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~   61 (167)
T d1tt7a2          23 EKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA   61 (167)
T ss_dssp             GGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTH
T ss_pred             CCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHH
Confidence            467899999999999999977777899999998887654

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=96.71  E-value=0.0013  Score=48.24  Aligned_cols=39  Identities=18%  Similarity=0.437  Sum_probs=34.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .+.++||+||+||+|...++-....|++|+.+++++++.
T Consensus        31 ~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~   69 (177)
T d1o89a2          31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTH   69 (177)
T ss_dssp             GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGH
T ss_pred             CCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHH
Confidence            456899999999999999988888899999888877764

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=96.67  E-value=0.006  Score=43.24  Aligned_cols=75  Identities=15%  Similarity=0.209  Sum_probs=55.3

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      .++|.|. +.+|..+++.|.++|.+++++...+++..+...+... ..+.++..|.++++.++++--      .+.|.+|
T Consensus         5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~~~vi~Gd~~d~~~L~~a~i------~~a~~vi   76 (153)
T d1id1a_           5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKAGI------DRCRAIL   76 (153)
T ss_dssp             CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHHTT------TTCSEEE
T ss_pred             EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc-CCcEEEEccCcchHHHHHhcc------ccCCEEE
Confidence            4677776 7999999999999999988888776654444443333 257889999999977665522      3678887


Q ss_pred             EcC
Q 041914           97 SNA   99 (264)
Q Consensus        97 ~~a   99 (264)
                      ...
T Consensus        77 ~~~   79 (153)
T d1id1a_          77 ALS   79 (153)
T ss_dssp             ECS
T ss_pred             Ecc
Confidence            664

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=96.66  E-value=0.0033  Score=45.64  Aligned_cols=79  Identities=20%  Similarity=0.310  Sum_probs=49.1

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+++|.|+ |++|...++.+...|+.++++.+..++..+...+. ..+  +++  |.++ +..+...+...  ...+|
T Consensus        32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~-ga~--~~i--~~~~-~~~~~~~~~~~--~~g~d  102 (172)
T d1h2ba2          32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERL-GAD--HVV--DARR-DPVKQVMELTR--GRGVN  102 (172)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHT-TCS--EEE--ETTS-CHHHHHHHHTT--TCCEE
T ss_pred             CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhc-ccc--eee--cCcc-cHHHHHHHhhC--CCCce
Confidence            4789999886 99999999888888987677666655544444333 222  233  3332 22333322111  13699


Q ss_pred             EEEEcCCC
Q 041914           94 IMFSNAGI  101 (264)
Q Consensus        94 ~lv~~ag~  101 (264)
                      ++|.++|.
T Consensus       103 ~vid~~g~  110 (172)
T d1h2ba2         103 VAMDFVGS  110 (172)
T ss_dssp             EEEESSCC
T ss_pred             EEEEecCc
Confidence            99999884

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=96.64  E-value=0.015  Score=41.24  Aligned_cols=120  Identities=12%  Similarity=0.101  Sum_probs=63.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhC-----CCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIG-----VGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      +.+++.|.|+ |.+|..++..|+..+. +++++..++........+..+     ....... .. ++.   +..+     
T Consensus         6 k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~-~~-~~~---~~~~-----   74 (154)
T d1pzga1           6 RRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVR-AE-YSY---EAAL-----   74 (154)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEE-EE-CSH---HHHH-----
T ss_pred             CCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEe-cc-Cch---hhhh-----
Confidence            3578888897 9999999999998885 555444444333222222211     1111111 11 111   1111     


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                        .+-|++|..+|.......+-.+.+.   .+.+..|+    .+++.+.+.+.+...++.++++|.
T Consensus        75 --~~adiVvitag~~~~~g~~~~~~tR---~~l~~~n~----~iv~~i~~~i~~~~p~aiviivsN  131 (154)
T d1pzga1          75 --TGADCVIVTAGLTKVPGKPDSEWSR---NDLLPFNS----KIIREIGQNIKKYCPKTFIIVVTN  131 (154)
T ss_dssp             --TTCSEEEECCSCSSCTTCCGGGCCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             --cCCCeEEEecccccCCCCCCcccch---hhhhhhhH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence              2679999999976543211111222   22333444    345566666666554677777663

>d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=96.62  E-value=0.044  Score=38.30  Aligned_cols=112  Identities=18%  Similarity=0.244  Sum_probs=62.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc---CCcEEEEecCchhhHHHHHhhhCC---CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           17 VAIITGGASGIGETTARLFADH---GARMIVIADIQDELGRQVATSIGV---GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~---g~~v~~~~~~~~~~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.|+|++|.+|.+++..|+.+   +.+++++. ..+.......+..+.   ..... ...-.+.+.    ++       
T Consensus         2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D-~~~~~~g~a~Dl~h~~~~~~~~~-~~~~~~~~~----~~-------   68 (145)
T d2cmda1           2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYD-IAPVTPGVAVDLSHIPTAVKIKG-FSGEDATPA----LE-------   68 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEEC-SSTTHHHHHHHHHTSCSSCEEEE-ECSSCCHHH----HT-------
T ss_pred             EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEec-ccccchhHHHHHHCCccccCCcE-EEcCCCccc----cC-------
Confidence            5789999999999999988754   35645554 444332222232221   11111 122223322    21       


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      +-|++|..+|....+.     .+   -.+.+..|.    .+++...+.+.+..+++.++++|.
T Consensus        69 ~aDvvvitaG~~~k~g-----~~---R~dl~~~N~----~i~~~v~~~i~~~~p~aivivvtN  119 (145)
T d2cmda1          69 GADVVLISAGVRRKPG-----MD---RSDLFNVNA----GIVKNLVQQVAKTCPKACIGIITN  119 (145)
T ss_dssp             TCSEEEECCSCCCCTT-----CC---GGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCEEEECCCccCCCC-----cc---hhhHHHHHH----HHHHHHHHHHHhhCCCcEEEEccC
Confidence            5799999999754321     12   233455554    345556666666554677777764

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=96.59  E-value=0.0036  Score=45.63  Aligned_cols=80  Identities=15%  Similarity=0.193  Sum_probs=49.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHH-HHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC-QVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~-~~~~~~~~~~~~~~~i   92 (264)
                      .|.+|+|.|+ ||+|...++.+...|+..+++.+..++..+...+ +..  .+++  |.++.+ .+.+.....  ..+.+
T Consensus        27 ~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~-lGa--~~~i--~~~~~d~~~~~~~~~~--~~~G~   98 (174)
T d1p0fa2          27 PGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGA--TECL--NPKDYDKPIYEVICEK--TNGGV   98 (174)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH-TTC--SEEE--CGGGCSSCHHHHHHHH--TTSCB
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHH-cCC--cEEE--cCCCchhHHHHHHHHh--cCCCC
Confidence            5889999985 9999999999999998756666555544444333 222  2233  332221 122222222  22479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|-+.|.
T Consensus        99 d~vid~~g~  107 (174)
T d1p0fa2          99 DYAVECAGR  107 (174)
T ss_dssp             SEEEECSCC
T ss_pred             cEEEEcCCC
Confidence            999998874

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=96.57  E-value=0.005  Score=44.90  Aligned_cols=80  Identities=18%  Similarity=0.245  Sum_probs=46.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|.+|+|+|+ ||+|...++.+...|+. |+++..+++++ +...+ +...  +++  |..+.+...+.+.+.. ..+.+
T Consensus        29 ~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl-~~Ak~-~GA~--~~i--n~~~~~~~~~~~~~~~-~g~G~  100 (176)
T d1d1ta2          29 PGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF-EKAMA-VGAT--ECI--SPKDSTKPISEVLSEM-TGNNV  100 (176)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH-HHHHH-HTCS--EEE--CGGGCSSCHHHHHHHH-HTSCC
T ss_pred             CCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHH-HHHHh-cCCc--EEE--CccccchHHHHHHHHh-ccccc
Confidence            5889999986 99999999999999975 44555544443 43333 3221  223  2222211111122211 12479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |++|.+.|.
T Consensus       101 d~vi~~~g~  109 (176)
T d1d1ta2         101 GYTFEVIGH  109 (176)
T ss_dssp             CEEEECSCC
T ss_pred             eEEEEeCCc
Confidence            999998874

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=96.55  E-value=0.018  Score=40.45  Aligned_cols=115  Identities=16%  Similarity=0.154  Sum_probs=62.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHH-hhh---C--CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVA-TSI---G--VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~-~~~---~--~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      |++.|+|+ |.+|..++..|+.+|. .-+++.+..++..+... +..   .  .........|.   +.           
T Consensus         2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~---~~-----------   66 (146)
T d1hyha1           2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDW---AA-----------   66 (146)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCG---GG-----------
T ss_pred             CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCH---HH-----------
Confidence            67888895 9999999999999874 32444444444333222 221   1  11222233332   11           


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      ..+-|++|.++|......    +.+.++-.+.++.|+    .+++.+.+.+.+..+.+.++++|.
T Consensus        67 l~~adiVVitaG~~~~~~----~~~g~~R~~l~~~N~----~i~~~i~~~i~~~~p~aivivvtN  123 (146)
T d1hyha1          67 LADADVVISTLGNIKLQQ----DNPTGDRFAELKFTS----SMVQSVGTNLKESGFHGVLVVISN  123 (146)
T ss_dssp             GTTCSEEEECCSCGGGTC-----------CTTHHHHH----HHHHHHHHHHHHTTCCSEEEECSS
T ss_pred             hccccEEEEecccccccc----ccCCccHHHHHHHHH----HHHHHHHHHHhhcCCCeEEEEecC
Confidence            126799999999754221    111112223344454    456777777777665677777763

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=96.51  E-value=0.038  Score=39.32  Aligned_cols=116  Identities=13%  Similarity=0.095  Sum_probs=67.9

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC-----CcEEEEEecCCCHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV-----GKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      ..+..+++.|.|+ |.+|..++..|+.+|.  +++++..+.+....+..+..+.     ........|..+         
T Consensus        16 ~~~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~~---------   85 (160)
T d1i0za1          16 ATVPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYSV---------   85 (160)
T ss_dssp             CCCCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGGG---------
T ss_pred             ccCCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchhh---------
Confidence            3456788889996 9999999999999976  5455544433332222222211     122222223221         


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                           ..+-|++|..||......     .+.   .+.+..|+    .+++.+.+.+.+...++.++++|.
T Consensus        86 -----~~~adiVVitAg~~~~~g-----~tR---~~l~~~N~----~i~~~i~~~i~~~~p~aiiivvtN  138 (160)
T d1i0za1          86 -----TANSKIVVVTAGVRQQEG-----ESR---LNLVQRNV----NVFKFIIPQIVKYSPDCIIIVVSN  138 (160)
T ss_dssp             -----GTTCSEEEECCSCCCCTT-----CCG---GGGHHHHH----HHHHHHHHHHHHHCTTCEEEECSS
T ss_pred             -----cccccEEEEecCCccccC-----cch---HHHHHHHH----HHHHHHHHHHHhcCCCcEEEEeCC
Confidence                 126799999999754321     221   23344444    466777777777665677777764

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=96.44  E-value=0.017  Score=40.43  Aligned_cols=111  Identities=15%  Similarity=0.120  Sum_probs=60.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           16 KVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      +++.|.|+ |.+|.+++..++.++.  +++++..+.+.......+..+.    ........|   .+           ..
T Consensus         2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~---~~-----------~~   66 (142)
T d1y6ja1           2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGD---YS-----------DV   66 (142)
T ss_dssp             CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--C---GG-----------GG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCc---HH-----------Hh
Confidence            45667787 9999999999999865  5566655554433333333221    222222211   11           12


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      .+-|++|..+|.....        .+.-.+.+..|+    .+++.+.+.+.+..+++.++++|.
T Consensus        67 ~~adivvitag~~~~~--------~~~r~~l~~~N~----~i~~~i~~~i~~~~p~ai~ivvtN  118 (142)
T d1y6ja1          67 KDCDVIVVTAGANRKP--------GETRLDLAKKNV----MIAKEVTQNIMKYYNHGVILVVSN  118 (142)
T ss_dssp             TTCSEEEECCCC--------------CHHHHHHHHH----HHHHHHHHHHHHHCCSCEEEECSS
T ss_pred             CCCceEEEecccccCc--------CcchhHHhhHHH----HHHHHHHHHhhccCCCceEEEecC
Confidence            3679999999865332        112345555665    456666666777554677777653

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=96.42  E-value=0.012  Score=39.28  Aligned_cols=75  Identities=11%  Similarity=0.161  Sum_probs=56.1

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ......+.++.|.| +|-+|+-++....+.|.+++++......-....       .-.++..|+.|.+.+.++....   
T Consensus         5 ~~~~~~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~v-------a~~~i~~~~~d~~~l~~~~~~~---   73 (111)
T d1kjqa2           5 TALRPAATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHV-------AHRSHVINMLDGDALRRVVELE---   73 (111)
T ss_dssp             CTTSTTCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGG-------SSEEEECCTTCHHHHHHHHHHH---
T ss_pred             CCCCCCCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhc-------CCeEEECCCCCHHHHHHHHHhh---
Confidence            34445667899999 578999999999999999888776544322221       2257889999999999888754   


Q ss_pred             cCCccEEE
Q 041914           89 YGQLDIMF   96 (264)
Q Consensus        89 ~~~id~lv   96 (264)
                        .+|++-
T Consensus        74 --~~DviT   79 (111)
T d1kjqa2          74 --KPHYIV   79 (111)
T ss_dssp             --CCSEEE
T ss_pred             --CCceEE
Confidence              689884

>d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=96.41  E-value=0.03  Score=39.58  Aligned_cols=114  Identities=11%  Similarity=0.065  Sum_probs=60.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc-----E-EEEe--cCchhhHHHHHhhhCC---CcEEEEEecCCCHHHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR-----M-IVIA--DIQDELGRQVATSIGV---GKCHYVHCDVTNECQVKALVDS   84 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~-----v-~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~~   84 (264)
                      -+|.|+||+|.+|.+++..|++.+.-     + +-+.  ....+..+......+.   .....+...-.+.+        
T Consensus         5 ~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------   76 (154)
T d1y7ta1           5 VRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKV--------   76 (154)
T ss_dssp             EEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHH--------
T ss_pred             CEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhh--------
Confidence            37899999999999999999987531     1 1111  2222222222222222   12333333322221        


Q ss_pred             HHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCC-CCcEEEEec
Q 041914           85 TVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGG-VRGSIVCTA  152 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~-~~~~iv~is  152 (264)
                         .+.+.|++|..+|....+     ..+.   .+.+..|+.    +++.+.+.+.+.. ..+.++.+|
T Consensus        77 ---~~~~advViitaG~~~~p-----g~~r---~dl~~~N~~----i~~~~~~~i~k~a~~~~~vivvs  130 (154)
T d1y7ta1          77 ---AFKDADYALLVGAAPRKA-----GMER---RDLLQVNGK----IFTEQGRALAEVAKKDVKVLVVG  130 (154)
T ss_dssp             ---HTTTCSEEEECCCCCCCT-----TCCH---HHHHHHHHH----HHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---hcccccEEEeecCcCCCC-----CCcH---HHHHHHHHH----HHHHHHHHHHHhCCCCcEEEEec
Confidence               123789999999975432     2343   334455554    4555556666532 135566554

>d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Haloarcula marismortui [TaxId: 2238]

Probab=96.40  E-value=0.044  Score=38.13  Aligned_cols=110  Identities=15%  Similarity=0.083  Sum_probs=65.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCc--hhhHH-HHHhhh---C-CCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           17 VAIITGGASGIGETTARLFADHGAR-MIVIADIQ--DELGR-QVATSI---G-VGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~--~~~~~-~~~~~~---~-~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++.|+|++|.+|.+++..++.++.- -+++.+..  ++..+ ...+..   . .........|..   +           
T Consensus         2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~~~~~~~i~~~~~~---~-----------   67 (142)
T d1o6za1           2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQGGYE---D-----------   67 (142)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEECCGG---G-----------
T ss_pred             eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcccccCCceEeeCCHH---H-----------
Confidence            5789999999999999999998653 24444422  22222 111211   1 123333333332   1           


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      ..+-|++|..||....+   -  .+   -.+.++.|+    .+++.+.+.+.+...++.++.++
T Consensus        68 ~~~aDiVvitaG~~~~~---g--~~---R~dl~~~N~----~I~~~i~~~i~~~~p~~i~ivvt  119 (142)
T d1o6za1          68 TAGSDVVVITAGIPRQP---G--QT---RIDLAGDNA----PIMEDIQSSLDEHNDDYISLTTS  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCT---T--CC---HHHHHHHHH----HHHHHHHHHHHTTCSCCEEEECC
T ss_pred             hhhcCEEEEeccccccc---C--Cc---hhhHHHHHH----HHHHHHHHHHHhcCCCceEEEec
Confidence            12679999999964322   1  22   345666665    45677777788876567777775

>d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Ribokinase-like
superfamily: CoaB-like
family: CoaB-like
domain: Phosphopantothenoylcysteine synthetase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.0057  Score=48.34  Aligned_cols=24  Identities=21%  Similarity=0.297  Sum_probs=22.1

Q ss_pred             ChhHHHHHHHHHHcCCcEEEEecC
Q 041914           25 SGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        25 ~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      |..|.++|+.|..+|+.|+++++.
T Consensus        46 Gk~G~alA~~~~~~Ga~V~li~g~   69 (290)
T d1p9oa_          46 GRRGATSAEAFLAAGYGVLFLYRA   69 (290)
T ss_dssp             CHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             hHHHHHHHHHHHHcCCEEEEEecC
Confidence            789999999999999999998765

>d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]

Probab=96.30  E-value=0.058  Score=38.94  Aligned_cols=115  Identities=10%  Similarity=0.036  Sum_probs=61.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCC-----cE-EEEecCch--hhHHHHHhhhCC---CcEEEEEecCCCHHHHHHHHH
Q 041914           15 GKVAIITGGASGIGETTARLFADHGA-----RM-IVIADIQD--ELGRQVATSIGV---GKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~-----~v-~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      ..+|.||||+|.||.+++..|++...     .+ +.+.....  +..+.+.-++..   .....+.. -++.   .    
T Consensus        24 ~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a~~~~~~~~~-~~~~---~----   95 (175)
T d7mdha1          24 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLYPLLREVSI-GIDP---Y----   95 (175)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEE-ESCH---H----
T ss_pred             CcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccccccccCccc-cccc---h----
Confidence            45799999999999999999998532     12 22333322  222322222221   11111111 1221   1    


Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCC-CcEEEEec
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGV-RGSIVCTA  152 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~-~~~iv~is  152 (264)
                         +.+.+.|++|..+|....+     ..+   ..+.++.|+    .+++.+.+.+.+... ...|+.++
T Consensus        96 ---~~~~~aDvVvi~ag~~rkp-----g~t---R~Dll~~N~----~I~k~~~~~i~~~a~~~~~vlvv~  150 (175)
T d7mdha1          96 ---EVFEDVDWALLIGAKPRGP-----GME---RAALLDING----QIFADQGKALNAVASKNVKVLVVG  150 (175)
T ss_dssp             ---HHTTTCSEEEECCCCCCCT-----TCC---HHHHHHHHH----HHHHHHHHHHHHHSCTTCEEEECS
T ss_pred             ---hhccCCceEEEeeccCCCC-----CCc---HHHHHHHHH----HHHHHHHHHHHhhCCCCcEEEEec
Confidence               1223789999999875432     133   445566664    455666666666431 34555554

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=96.18  E-value=0.011  Score=42.77  Aligned_cols=80  Identities=15%  Similarity=0.308  Sum_probs=47.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHH-HHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQ-VKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~-~~~~~~~~~~~~~~i   92 (264)
                      .|.+|+|.|+ +|+|...+..++..|...+++..+.++..+...+ +..  -+++  |..+.+. ..+......  .+.+
T Consensus        28 ~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~-~GA--d~~i--n~~~~~~~~~~~~~~~~--~~G~   99 (175)
T d1cdoa2          28 PGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV-FGA--TDFV--NPNDHSEPISQVLSKMT--NGGV   99 (175)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH-TTC--CEEE--CGGGCSSCHHHHHHHHH--TSCB
T ss_pred             CCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHHH-cCC--cEEE--cCCCcchhHHHHHHhhc--cCCc
Confidence            5789999985 7788888888988888766655555544444333 322  2333  3222211 222222222  2479


Q ss_pred             cEEEEcCCC
Q 041914           93 DIMFSNAGI  101 (264)
Q Consensus        93 d~lv~~ag~  101 (264)
                      |+++-+.|.
T Consensus       100 d~vid~~G~  108 (175)
T d1cdoa2         100 DFSLECVGN  108 (175)
T ss_dssp             SEEEECSCC
T ss_pred             ceeeeecCC
Confidence            999999884

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=96.15  E-value=0.1  Score=36.56  Aligned_cols=117  Identities=15%  Similarity=0.229  Sum_probs=64.8

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC------CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV------GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~------~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      .++.|.|+ |.+|.+++..|+..+..=+++.+..++..+.....+.+      .+......+-  .           +..
T Consensus         4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~--~-----------~~~   69 (150)
T d1t2da1           4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNT--Y-----------DDL   69 (150)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECC--G-----------GGG
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEeccc--c-----------ccc
Confidence            46778895 99999999988888765455555444333332222211      1222332221  1           112


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      .+-|++|.++|........-.+.+   -.+.+..|.    .+++.+.+.+.+..+++.++++|.
T Consensus        70 ~~advvvitag~~~~~g~~~~~~~---R~~l~~~N~----~iv~~i~~~i~~~~p~aivivvtN  126 (150)
T d1t2da1          70 AGADVVIVTAGFTKAPGKSDKEWN---RDDLLPLNN----KIMIEIGGHIKKNCPNAFIIVVTN  126 (150)
T ss_dssp             TTCSEEEECCSCSSCTTCCSTTCC---GGGGHHHHH----HHHHHHHHHHHHHCTTSEEEECSS
T ss_pred             CCCcEEEEecccccCCCCCccccc---hhHHHHHHH----HHHHHHHHHHHhcCCCeEEEEecC
Confidence            367999999997543311111111   223344554    456666666776654677777663

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.12  E-value=0.021  Score=40.77  Aligned_cols=38  Identities=21%  Similarity=0.310  Sum_probs=31.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .|.+++|.|+ |++|...++.+...|++|+++.+++++.
T Consensus        27 ~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~   64 (166)
T d1llua2          27 PGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKL   64 (166)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH
T ss_pred             CCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHH
Confidence            4889999886 9999999988888899988887765554

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.11  E-value=0.0025  Score=45.21  Aligned_cols=37  Identities=19%  Similarity=0.399  Sum_probs=33.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .+++||++||+|| |.+|..-++.|.+.|++|.+++-.
T Consensus         9 ~~l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~   45 (150)
T d1kyqa1           9 HQLKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD   45 (150)
T ss_dssp             ECCTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred             eeeCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence            4689999999999 669999999999999999888654

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.10  E-value=0.04  Score=39.13  Aligned_cols=114  Identities=15%  Similarity=0.092  Sum_probs=64.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhC---C-C-cEEEEEecCCCHHHHHHHHHHH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIG---V-G-KCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~---~-~-~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ++..++.|+|+ |.+|..+|..|+..|.  +++++..+.+.......+..+   . . .......|..            
T Consensus        17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~------------   83 (159)
T d2ldxa1          17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN------------   83 (159)
T ss_dssp             CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG------------
T ss_pred             CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh------------
Confidence            45567888896 9999999999999866  555554443333222222221   1 1 2222222322            


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                        ...+-|++|..+|......     .+.   .+.++.|+    .+.+.+.+.+.+...++.+++++.
T Consensus        84 --~~~~adivvitag~~~~~~-----~~R---~dll~~N~----~i~~~i~~~i~~~~p~~ivivvtN  137 (159)
T d2ldxa1          84 --VSANSKLVIITAGARMVSG-----QTR---LDLLQRNV----AIMKAIVPGVIQNSPDCKIIVVTN  137 (159)
T ss_dssp             --GGTTEEEEEECCSCCCCTT-----TCS---SCTTHHHH----HHHHHHTTTHHHHSTTCEEEECSS
T ss_pred             --hhccccEEEEecccccCCC-----CCH---HHHHHHHH----HHHHHHHHHHhccCCCeEEEEeCC
Confidence              1136799999998754331     111   11233333    345666666776665778887764

>d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chlorobium vibrioforme [TaxId: 1098]

Probab=96.09  E-value=0.085  Score=36.54  Aligned_cols=110  Identities=14%  Similarity=0.185  Sum_probs=61.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcC--CcEEEEecCchhhHHHHHhhhCC-----CcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           17 VAIITGGASGIGETTARLFADHG--ARMIVIADIQDELGRQVATSIGV-----GKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g--~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ++.|+|+ |.+|.+++..|+..|  .+++++..++........+....     ....+...+  +.+.           .
T Consensus         2 KI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~--~~~~-----------~   67 (142)
T d1guza1           2 KITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSN--DYAD-----------T   67 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEES--CGGG-----------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecC--CHHH-----------h
Confidence            4677896 999999999999987  45555554544333222222221     123333221  1211           1


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      .+-|++|.++|......     .+.   .+.++.|+.    +++...+.+.+..+++.++++|
T Consensus        68 ~dadvvvitag~~~~~g-----~~r---~~l~~~N~~----i~~~i~~~i~~~~p~aivivvt  118 (142)
T d1guza1          68 ANSDIVIITAGLPRKPG-----MTR---EDLLMKNAG----IVKEVTDNIMKHSKNPIIIVVS  118 (142)
T ss_dssp             TTCSEEEECCSCCCCTT-----CCH---HHHHHHHHH----HHHHHHHHHHHHCSSCEEEECC
T ss_pred             cCCeEEEEEEecCCCCC-----Cch---HHHHHHHHH----HHHHHHHHhhccCCCeEEEEec
Confidence            36799999999754321     222   344445544    4555555566654466777665

>d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: MJ0490, lactate/malate dehydrogenase
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.08  E-value=0.084  Score=36.77  Aligned_cols=109  Identities=16%  Similarity=0.172  Sum_probs=59.5

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCch-hhHH----HHHhhhCC----CcEEEEEecCCCHHHHHHHHHHH
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQD-ELGR----QVATSIGV----GKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~-~~~~----~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ++.|+||+|.+|.+++..|+.+|.  +++++..+.. +..+    .+......    .++.....+  |.          
T Consensus         2 KV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~--d~----------   69 (145)
T d1hyea1           2 KVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALAGTRSDANIYVESDE--NL----------   69 (145)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHTTSCCCCEEEEEETT--CG----------
T ss_pred             EEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcccccccCCccccCCcc--hH----------
Confidence            488999999999999999999983  5555554432 1112    12221111    122222221  11          


Q ss_pred             HHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEe
Q 041914           86 VQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCT  151 (264)
Q Consensus        86 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~i  151 (264)
                       +...+-|++|.+||.....     ..+   -.+.++.|..    +++.+.+.+.+.. ...++.+
T Consensus        70 -~~l~~aDvVVitAG~~~~~-----g~s---R~dl~~~Na~----iv~~i~~~i~~~~-~~~iivV  121 (145)
T d1hyea1          70 -RIIDESDVVIITSGVPRKE-----GMS---RMDLAKTNAK----IVGKYAKKIAEIC-DTKIFVI  121 (145)
T ss_dssp             -GGGTTCSEEEECCSCCCCT-----TCC---HHHHHHHHHH----HHHHHHHHHHHHC-CCEEEEC
T ss_pred             -HHhccceEEEEecccccCC-----CCC---hhhhhhhhHH----HHHHHHHHHhccC-CCeEEEE
Confidence             1123679999999974332     123   3345566664    4555555555544 2344444

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=96.06  E-value=0.012  Score=43.57  Aligned_cols=81  Identities=12%  Similarity=0.128  Sum_probs=47.8

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCcc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLD   93 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id   93 (264)
                      .|.+|||.|+ |++|...+......|+..+++....+...+...+. .  .-+.  .|-.+.+-.++. .++. ....+|
T Consensus        25 ~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~-G--a~~~--~~~~~~~~~~~i-~~~t-~g~g~D   96 (195)
T d1kola2          25 PGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ-G--FEIA--DLSLDTPLHEQI-AALL-GEPEVD   96 (195)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-T--CEEE--ETTSSSCHHHHH-HHHH-SSSCEE
T ss_pred             CCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhc-c--ccEE--EeCCCcCHHHHH-HHHh-CCCCcE
Confidence            5889999986 89998888877778886566555555443433322 2  1122  233333222222 2222 123699


Q ss_pred             EEEEcCCCC
Q 041914           94 IMFSNAGIL  102 (264)
Q Consensus        94 ~lv~~ag~~  102 (264)
                      ++|.+.|.-
T Consensus        97 ~vid~vG~~  105 (195)
T d1kola2          97 CAVDAVGFE  105 (195)
T ss_dssp             EEEECCCTT
T ss_pred             EEEECcccc
Confidence            999998853

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.00  E-value=0.08  Score=36.63  Aligned_cols=109  Identities=17%  Similarity=0.151  Sum_probs=61.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.|.|+ |.+|.+++..++.++.  +++++..+++.......+...    .........|..   +           ..
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~~~~~---~-----------~~   66 (140)
T d1a5za1           2 KIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAGDYA---D-----------LK   66 (140)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEECCGG---G-----------GT
T ss_pred             EEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccCCcHH---H-----------hc
Confidence            4667796 8999999999998864  544444443333222222211    122233333321   1           12


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      +-|++|.++|.....     ..+.   .+.+..|+    .+++.+.+.+.+..+++.++++|
T Consensus        67 ~adivvitag~~~~~-----g~~r---~dl~~~N~----~I~~~i~~~i~~~~p~aivivvt  116 (140)
T d1a5za1          67 GSDVVIVAAGVPQKP-----GETR---LQLLGRNA----RVMKEIARNVSKYAPDSIVIVVT  116 (140)
T ss_dssp             TCSEEEECCCCCCCS-----SCCH---HHHHHHHH----HHHHHHHHHHHHHCTTCEEEECS
T ss_pred             CCCEEEEecccccCC-----Ccch---hhhhcccc----chHHHHHHHHHhcCCCcEEEEeC
Confidence            679999999975432     1222   33444453    45677777777766567777665

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=95.95  E-value=0.04  Score=39.16  Aligned_cols=79  Identities=14%  Similarity=0.130  Sum_probs=48.8

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhh-----------CCCcEEEEEecCCCHHHHHHHHHHH
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSI-----------GVGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      ++.|.|. |-+|.++++.|.++|++|+...|+.+...+..+...           ....+.++..   ..+++.++++++
T Consensus         2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~~~~~~~~~~~~~~~DiIilav---p~~~~~~vl~~l   77 (165)
T d2f1ka2           2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCT---PIQLILPTLEKL   77 (165)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTSCSEEESCGGGGTTCSEEEECS---CHHHHHHHHHHH
T ss_pred             EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhccceeeeecccccccccccccC---cHhhhhhhhhhh
Confidence            3566755 999999999999999998777666554433222111           1123333322   356788888888


Q ss_pred             HHhcCCccEEEEcC
Q 041914           86 VQNYGQLDIMFSNA   99 (264)
Q Consensus        86 ~~~~~~id~lv~~a   99 (264)
                      .+...+=.+++..+
T Consensus        78 ~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          78 IPHLSPTAIVTDVA   91 (165)
T ss_dssp             GGGSCTTCEEEECC
T ss_pred             hhhcccccceeecc
Confidence            76554444555543

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=95.92  E-value=0.12  Score=35.78  Aligned_cols=110  Identities=14%  Similarity=0.077  Sum_probs=61.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhhCC----CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSIGV----GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~~~----~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      ++.|+|+ |.+|.+++..++.+|.  +++++..+++.......+....    ........+-  .+.+           .
T Consensus         3 Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~--~~~~-----------~   68 (143)
T d1llda1           3 KLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDD--PEIC-----------R   68 (143)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESC--GGGG-----------T
T ss_pred             EEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCC--HHHh-----------h
Confidence            5677796 9999999999998876  4555444443332222222111    1222222211  1111           2


Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      +-|++|..+|.....     ..+.   .+.+..|+    .+++...+.+.+...++.++++|
T Consensus        69 daDvVVitaG~~~~~-----g~~R---~dl~~~N~----~i~~~i~~~i~~~~p~ai~ivvt  118 (143)
T d1llda1          69 DADMVVITAGPRQKP-----GQSR---LELVGATV----NILKAIMPNLVKVAPNAIYMLIT  118 (143)
T ss_dssp             TCSEEEECCCCCCCT-----TCCH---HHHHHHHH----HHHHHHHHHHHHHCTTSEEEECC
T ss_pred             CCcEEEEecccccCC-----CCch---hhhhhhhH----HHHHHHHHHHHhhCCCeEEEEeC
Confidence            569999999975322     1333   34555665    45566666667666467777666

>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Chloroflexus aurantiacus [TaxId: 1108]

Probab=95.78  E-value=0.092  Score=36.38  Aligned_cols=110  Identities=12%  Similarity=0.111  Sum_probs=61.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCC-cEEEEecCchhhHHHHHhhhCC-----CcEEEEE-ecCCCHHHHHHHHHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGA-RMIVIADIQDELGRQVATSIGV-----GKCHYVH-CDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~-~v~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-~D~s~~~~~~~~~~~~~~~   88 (264)
                      |++.|+|+ |.+|.++|..|+.++. +++++..+++.......+....     ....+.. -|..+              
T Consensus         2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~d~~~--------------   66 (142)
T d1uxja1           2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNYAD--------------   66 (142)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCGGG--------------
T ss_pred             CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhccccccCCCCEEEecCcHHH--------------
Confidence            56778886 9999999999998875 5555544444332222222211     1112221 12221              


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      ..+-|++|.+||....+        .+.-.+.+..|+    .+++...+.+.+..+++.++++|
T Consensus        67 ~~~advvvitag~~~~~--------~~~r~dl~~~N~----~i~~~i~~~i~k~~p~aivivvt  118 (142)
T d1uxja1          67 TANSDVIVVTSGAPRKP--------GMSREDLIKVNA----DITRACISQAAPLSPNAVIIMVN  118 (142)
T ss_dssp             GTTCSEEEECCSCC-----------------CHHHHH----HHHHHHHHHHGGGCTTCEEEECS
T ss_pred             hcCCCEEEEeeeccCCc--------CcchhHHHhHHH----HHHHHHHHHHhccCCCceEEEeC
Confidence            12679999999975432        112234445554    46778888888866567777655

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=95.66  E-value=0.011  Score=42.32  Aligned_cols=43  Identities=16%  Similarity=0.189  Sum_probs=36.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ..++.||+++|.|-|.-+|+.++..|.++|++|.++.+...+.
T Consensus        32 ~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l   74 (166)
T d1b0aa1          32 NIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNL   74 (166)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCH
T ss_pred             CcccccceEEEEeccccccHHHHHHHHHhhccccccccccchh
Confidence            4478999999999999999999999999999977766655444

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.63  E-value=0.012  Score=42.36  Aligned_cols=76  Identities=22%  Similarity=0.324  Sum_probs=48.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEE-ecCCCHHHHHHHHHHHHHhcCCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVH-CDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      .|.+++|.|+ |++|...++.+...|++|+++.+++++. +... .+..+  +++. .+-.+.      .   ++..+..
T Consensus        27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~-~~a~-~lGa~--~~i~~~~~~~~------~---~~~~~~~   92 (168)
T d1piwa2          27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKR-EDAM-KMGAD--HYIATLEEGDW------G---EKYFDTF   92 (168)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTH-HHHH-HHTCS--EEEEGGGTSCH------H---HHSCSCE
T ss_pred             CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHH-HHhh-ccCCc--EEeeccchHHH------H---Hhhhccc
Confidence            5889999986 8999998887778899988888876654 3332 33322  2222 222111      1   1223578


Q ss_pred             cEEEEcCCCCC
Q 041914           93 DIMFSNAGILS  103 (264)
Q Consensus        93 d~lv~~ag~~~  103 (264)
                      |+++.+.+...
T Consensus        93 d~vi~~~~~~~  103 (168)
T d1piwa2          93 DLIVVCASSLT  103 (168)
T ss_dssp             EEEEECCSCST
T ss_pred             ceEEEEecCCc
Confidence            99999877544

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=95.56  E-value=0.01  Score=42.91  Aligned_cols=39  Identities=28%  Similarity=0.390  Sum_probs=34.5

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      ..+++||+++|.|-|.=+|+.++..|.++|+.|..+...
T Consensus        24 g~~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~   62 (171)
T d1edza1          24 GNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN   62 (171)
T ss_dssp             TCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred             cCCCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccc
Confidence            458999999999999999999999999999997665543

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=95.54  E-value=0.037  Score=38.15  Aligned_cols=77  Identities=19%  Similarity=0.217  Sum_probs=52.6

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      ++.|.|++|.+|+.+++...+. +.+++...+..++..... .  ....   +-.|+|.++.+...++...+.  ++-.+
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-~--~~~D---vvIDFS~p~~~~~~~~~~~~~--~~~~V   72 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-D--GNTE---VVIDFTHPDVVMGNLEFLIDN--GIHAV   72 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-T--TTCS---EEEECCCTTTHHHHHHHHHHT--TCEEE
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-c--ccCC---EEEEcccHHHHHHHHHHHHhc--CCCEE
Confidence            5789999999999999987764 566555554444332221 1  1111   567999999999999888765  56677


Q ss_pred             EEcCCC
Q 041914           96 FSNAGI  101 (264)
Q Consensus        96 v~~ag~  101 (264)
                      +-..|.
T Consensus        73 iGTTG~   78 (135)
T d1yl7a1          73 VGTTGF   78 (135)
T ss_dssp             ECCCCC
T ss_pred             Eecccc
Confidence            655553

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.50  E-value=0.013  Score=42.25  Aligned_cols=43  Identities=16%  Similarity=0.236  Sum_probs=37.1

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ..+++||.++|.|-|.-+|+.++..|.++|++|.++.......
T Consensus        34 ~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l   76 (170)
T d1a4ia1          34 GVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL   76 (170)
T ss_dssp             TCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH
T ss_pred             CcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH
Confidence            4578999999999999999999999999999977776655544

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=95.07  E-value=0.14  Score=36.66  Aligned_cols=84  Identities=14%  Similarity=0.106  Sum_probs=54.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC----------------CcEEEEEecCCCHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV----------------GKCHYVHCDVTNECQVK   79 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~D~s~~~~~~   79 (264)
                      +.+-|.|- |-+|.++++.|+++|++|++..|+.++..+...+....                .....+-..+.+.+.+.
T Consensus         3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~   81 (176)
T d2pgda2           3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVD   81 (176)
T ss_dssp             BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHH
T ss_pred             CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhccccccccchhhhhhhhhhhcccceEEEecCchHHHH
Confidence            44566665 89999999999999999777766665543332221100                12234445566677888


Q ss_pred             HHHHHHHHhcCCccEEEEcCC
Q 041914           80 ALVDSTVQNYGQLDIMFSNAG  100 (264)
Q Consensus        80 ~~~~~~~~~~~~id~lv~~ag  100 (264)
                      ...+.+......=+++|.+..
T Consensus        82 ~v~~~l~~~~~~g~iiid~sT  102 (176)
T d2pgda2          82 NFIEKLVPLLDIGDIIIDGGN  102 (176)
T ss_dssp             HHHHHHHHHCCTTCEEEECSC
T ss_pred             HHHHHHHhccccCcEEEecCc
Confidence            888888776555567776653

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=94.98  E-value=0.059  Score=36.72  Aligned_cols=74  Identities=14%  Similarity=0.284  Sum_probs=53.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEEE
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIMF   96 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~lv   96 (264)
                      ++.|.|++|.+|+.+++.+.+.|.+++........      +......   +-.|+|.++.+.+.++...+.  ++-+++
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~~~D---VvIDFS~p~~~~~~l~~~~~~--~~p~Vi   70 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELDSPD---VVIDFSSPEALPKTVDLCKKY--RAGLVL   70 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECSCCS---EEEECSCGGGHHHHHHHHHHH--TCEEEE
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhccCC---EEEEecCHHHHHHHHHHHHhc--CCCEEE
Confidence            58999999999999999999999986654432211      1111112   456999999999999988876  566777


Q ss_pred             EcCCC
Q 041914           97 SNAGI  101 (264)
Q Consensus        97 ~~ag~  101 (264)
                      -..|.
T Consensus        71 GTTG~   75 (128)
T d1vm6a3          71 GTTAL   75 (128)
T ss_dssp             CCCSC
T ss_pred             EcCCC
Confidence            66653

>d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.97  E-value=0.26  Score=34.38  Aligned_cols=24  Identities=17%  Similarity=0.181  Sum_probs=21.3

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcC
Q 041914           16 KVAIITGGASGIGETTARLFADHG   39 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g   39 (264)
                      -+|.|+||+|.+|.+++..|+..+
T Consensus         4 ~KV~IiGA~G~VG~~la~~l~~~~   27 (154)
T d5mdha1           4 IRVLVTGAAGQIAYSLLYSIGNGS   27 (154)
T ss_dssp             EEEEESSTTSHHHHTTHHHHHTTT
T ss_pred             eEEEEECCCCHHHHHHHHHHHHHH
Confidence            478999999999999999998754

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=94.81  E-value=0.028  Score=41.67  Aligned_cols=37  Identities=27%  Similarity=0.505  Sum_probs=31.4

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .+|+||+++|-| .|.+|..+++.|.+.|++|++....
T Consensus        23 ~~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d   59 (201)
T d1c1da1          23 GSLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTD   59 (201)
T ss_dssp             CCSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecch
Confidence            369999999987 7889999999999999996655443

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.026  Score=41.55  Aligned_cols=37  Identities=24%  Similarity=0.437  Sum_probs=31.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhH
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELG   53 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~   53 (264)
                      |++.|.|+ |-+|..+|..|+.+|++|++..++++.+.
T Consensus         5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~   41 (192)
T d1f0ya2           5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA   41 (192)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred             EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHH
Confidence            78899998 88999999999999999887777765443

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.70  E-value=0.022  Score=41.25  Aligned_cols=41  Identities=17%  Similarity=0.290  Sum_probs=31.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ..++++|++||.|+ ||.+++++..|.+.| ++.++.|+.++.
T Consensus        13 ~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka   53 (177)
T d1nvta1          13 IGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKA   53 (177)
T ss_dssp             HCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHH
T ss_pred             CCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHH
Confidence            34689999999976 789999999998777 656666654443

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=94.62  E-value=0.035  Score=40.85  Aligned_cols=40  Identities=15%  Similarity=0.235  Sum_probs=33.6

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||++.|.| .|.||+.+++.+...|.+|+...+...
T Consensus        44 ~~eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~   83 (193)
T d1mx3a1          44 AARIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLS   83 (193)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             ceeeeCceEEEec-cccccccceeeeeccccceeeccCccc
Confidence            4569999999995 589999999999999999777666433

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=94.50  E-value=0.037  Score=40.24  Aligned_cols=37  Identities=19%  Similarity=0.338  Sum_probs=31.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      .+.||++.|.|.. .||+.+++.+...|.+|+...+..
T Consensus        39 ~l~gk~vgIiG~G-~IG~~va~~l~~~g~~v~~~d~~~   75 (181)
T d1qp8a1          39 LIQGEKVAVLGLG-EIGTRVGKILAALGAQVRGFSRTP   75 (181)
T ss_dssp             CCTTCEEEEESCS-THHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccCceEEEeccc-cccccceeeeeccccccccccccc
Confidence            5899999999974 599999999999999977776654

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=94.47  E-value=0.022  Score=40.43  Aligned_cols=35  Identities=9%  Similarity=0.142  Sum_probs=31.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      +++|.|+ |.+|..++..|++.|++|.++.|..+..
T Consensus         2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~   36 (167)
T d1ks9a2           2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPY   36 (167)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSE
T ss_pred             EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHh
Confidence            5789988 9999999999999999999999887643

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=94.46  E-value=0.14  Score=36.11  Aligned_cols=38  Identities=18%  Similarity=0.323  Sum_probs=30.2

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .|.++||.|+ |++|...++.+...|++|+++.+++++.
T Consensus        27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~   64 (168)
T d1rjwa2          27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKL   64 (168)
T ss_dssp             TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHh
Confidence            5789999875 9999999888888899977776655543

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=94.40  E-value=0.037  Score=39.90  Aligned_cols=36  Identities=17%  Similarity=0.128  Sum_probs=31.7

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      |++.|.|+ |.+|.+++..|+++|++|.+..|+++..
T Consensus         2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~   37 (184)
T d1bg6a2           2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRI   37 (184)
T ss_dssp             CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHH
Confidence            78899998 9999999999999999988888876554

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=94.30  E-value=0.077  Score=39.05  Aligned_cols=39  Identities=18%  Similarity=0.395  Sum_probs=32.6

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++.||++.|.| .|.||+.+++.|...|.+|+...+...
T Consensus        39 ~el~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~   77 (197)
T d1j4aa1          39 REVRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRN   77 (197)
T ss_dssp             CCGGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred             ccccCCeEEEec-ccccchhHHHhHhhhcccccccCcccc
Confidence            468999999998 489999999999999999776655433

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=94.23  E-value=0.028  Score=41.10  Aligned_cols=38  Identities=18%  Similarity=0.207  Sum_probs=31.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGR   54 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~   54 (264)
                      |++.|.|+ |-+|..+|..|+.+|++|++..++++...+
T Consensus         5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~   42 (186)
T d1wdka3           5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQ   42 (186)
T ss_dssp             SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHH
T ss_pred             CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhh
Confidence            66888998 889999999999999998888777655433

>d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: Succinyl-CoA synthetase domains
family: Succinyl-CoA synthetase domains
domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.94  E-value=0.63  Score=32.50  Aligned_cols=82  Identities=15%  Similarity=0.178  Sum_probs=58.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecC---CCHHHHHHHHHHHHHhcC
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDV---TNECQVKALVDSTVQNYG   90 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~---s~~~~~~~~~~~~~~~~~   90 (264)
                      +|+++.|.+.+||.|.-.+..+.+.|-+   +..-+++..+.+.+.+......--++|+   .+.+...++++.+.+. +
T Consensus         2 ~G~rvaiit~sGG~~~l~aD~~~~~Gl~---l~~l~~~t~~~L~~~lp~~~~~~NPlD~~~~~~~~~~~~~l~~~~~d-~   77 (163)
T d2csua3           2 RGNKVAIMTNAGGPGVLTADELDKRGLK---LATLEEKTIEELRSFLPPMAAVKNPVDMIASARGEDYYRTAKLLLQD-P   77 (163)
T ss_dssp             SSSEEEEEESCHHHHHHHHHHHHTTTCE---ECCCCHHHHHHHHHHSCTTCEESSEEECCTTCCHHHHHHHHHHHHHS-T
T ss_pred             CCCeEEEEECChHHHHHHHHHHHHcCCc---cCCCCHHHHHHHHHhCCCcccCCCcccccCCCCHHHHHHHHHHHHcC-C
Confidence            6899999999999999999999999965   5666666767777766542222234555   3567777777766654 5


Q ss_pred             CccEEEEcC
Q 041914           91 QLDIMFSNA   99 (264)
Q Consensus        91 ~id~lv~~a   99 (264)
                      .+|.++...
T Consensus        78 ~vd~v~v~~   86 (163)
T d2csua3          78 NVDMLIAIC   86 (163)
T ss_dssp             TCSEEEEEE
T ss_pred             CcCEEEEee
Confidence            688765443

>d1u0sy_ c.23.1.1 (Y:) CheY protein {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: CheY-like
family: CheY-related
domain: CheY protein
species: Thermotoga maritima [TaxId: 2336]

Probab=93.94  E-value=0.19  Score=33.40  Aligned_cols=80  Identities=16%  Similarity=0.100  Sum_probs=56.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCC--CHHHHHHHHHHHHHhcCCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVT--NECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s--~~~~~~~~~~~~~~~~~~i   92 (264)
                      ||++||.--..-+...+...|.+.|++|+..+.+..+..+.+.+.    +...+-+|+.  +. +--.+++++++....+
T Consensus         1 GkrILivDD~~~~~~~l~~~L~~~g~~v~~~a~~~~~al~~~~~~----~~dliilD~~mp~~-~G~e~~~~ir~~~~~~   75 (118)
T d1u0sy_           1 GKRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKEL----KPDIVTMDITMPEM-NGIDAIKEIMKIDPNA   75 (118)
T ss_dssp             CCEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH----CCSEEEEECSCGGG-CHHHHHHHHHHHCTTC
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHhc----cCCEEEEecCCCCC-CHHHHHHHHHHhCCCC
Confidence            799999999999999999999999999766666666555555443    2334555554  33 3345677777776677


Q ss_pred             cEEEEcC
Q 041914           93 DIMFSNA   99 (264)
Q Consensus        93 d~lv~~a   99 (264)
                      -+++..+
T Consensus        76 pvi~ls~   82 (118)
T d1u0sy_          76 KIIVCSA   82 (118)
T ss_dssp             CEEEEEC
T ss_pred             cEEEEEc
Confidence            7776553

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.90  E-value=0.13  Score=37.24  Aligned_cols=40  Identities=23%  Similarity=0.311  Sum_probs=33.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||++.|.| .|.||+++++.+...|.+|+...+...
T Consensus        39 ~~~l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~   78 (184)
T d1ygya1          39 GTEIFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVS   78 (184)
T ss_dssp             BCCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSC
T ss_pred             cccccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCC
Confidence            3468899999988 699999999999999999777665544

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.89  E-value=0.16  Score=33.63  Aligned_cols=35  Identities=20%  Similarity=0.454  Sum_probs=30.4

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence            378888876 89999999999999999999987765

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.64  E-value=0.13  Score=34.46  Aligned_cols=36  Identities=22%  Similarity=0.307  Sum_probs=30.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .|+++|.|| |.||.++|..|++.|.+|.++.+.+.-
T Consensus        23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~   58 (122)
T d1v59a2          23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI   58 (122)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred             CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence            477888876 789999999999999999888886553

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=93.54  E-value=0.091  Score=38.41  Aligned_cols=40  Identities=20%  Similarity=0.171  Sum_probs=32.7

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..++.||++.|.|. |.||+.+++.+...|.+++...+...
T Consensus        42 ~~~l~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~   81 (191)
T d1gdha1          42 GEKLDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRA   81 (191)
T ss_dssp             BCCCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCC
T ss_pred             cceecccceEEeec-ccchHHHHHHHHhhcccccccccccc
Confidence            45678999999975 89999999999999999776665443

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=93.46  E-value=0.073  Score=39.22  Aligned_cols=39  Identities=23%  Similarity=0.406  Sum_probs=33.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.||++.|.|. |.||+.+++.|...|.+|+...+..
T Consensus        40 ~~~l~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~   78 (199)
T d1dxya1          40 GKELGQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYP   78 (199)
T ss_dssp             CCCGGGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceeeeeeec-ccccccccccccccceeeeccCCcc
Confidence            35688999999985 7899999999999999987776643

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=93.37  E-value=0.18  Score=33.31  Aligned_cols=34  Identities=15%  Similarity=0.226  Sum_probs=29.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      |+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        22 ~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          22 ERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CEEEEECC-ChhhHHHHHHhhccccEEEEEeecch
Confidence            67777765 89999999999999999988888654

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=93.32  E-value=0.16  Score=36.95  Aligned_cols=39  Identities=18%  Similarity=0.108  Sum_probs=33.3

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.++++.|.| .|.||+++++.|...|.+|+...+..
T Consensus        39 ~~~l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d2naca1          39 AYDLEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHR   77 (188)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSC
T ss_pred             ceeccccceeecc-ccccchhhhhhhhccCceEEEEeecc
Confidence            5578999999998 58899999999999999977776643

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=93.25  E-value=0.086  Score=35.69  Aligned_cols=70  Identities=20%  Similarity=0.239  Sum_probs=46.9

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCccEE
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQLDIM   95 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~id~l   95 (264)
                      |.++|.| .+.+|+.+++.|.  |..++++...++.. +.+...    .+.++..|.++++.++++-      ..+-+.+
T Consensus         1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~-~~~~~~----~~~~i~Gd~~~~~~L~~a~------i~~A~~v   66 (129)
T d2fy8a1           1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVR-KKVLRS----GANFVHGDPTRVSDLEKAN------VRGARAV   66 (129)
T ss_dssp             CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHH-HHHHHT----TCEEEESCTTSHHHHHHTT------CTTCSEE
T ss_pred             CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHH-HHHHhc----CccccccccCCHHHHHHhh------hhcCcEE
Confidence            4577777 5889999999994  55666666555443 332222    4678899999997777642      2466778


Q ss_pred             EEcC
Q 041914           96 FSNA   99 (264)
Q Consensus        96 v~~a   99 (264)
                      |.+.
T Consensus        67 i~~~   70 (129)
T d2fy8a1          67 IVNL   70 (129)
T ss_dssp             EECC
T ss_pred             EEec
Confidence            7543

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=93.22  E-value=0.68  Score=32.42  Aligned_cols=83  Identities=8%  Similarity=0.008  Sum_probs=47.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCc--EEEEecCchhhHHHHHhhhCCCc-------EEEEEec----CCCHHHHHHHH
Q 041914           16 KVAIITGGASGIGETTARLFADHGAR--MIVIADIQDELGRQVATSIGVGK-------CHYVHCD----VTNECQVKALV   82 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~--v~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~D----~s~~~~~~~~~   82 (264)
                      |+++|.| .|-+|.++++.|.+.|+.  |....++ .+..+.+.+...-+.       .....+|    ..-++++...+
T Consensus         2 k~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~-~~~~~~a~~~~~~~~~~~~~~~~~~~~~dlIila~p~~~~~~vl   79 (171)
T d2g5ca2           2 QNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDIN-PESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLSSPVRTFREIA   79 (171)
T ss_dssp             CEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSC-HHHHHHHHHTTSCSEEESCGGGGGGTCCSEEEECSCHHHHHHHH
T ss_pred             CEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECC-hHHHHHHHHhhcchhhhhhhhhhhccccccccccCCchhhhhhh
Confidence            4688887 599999999999999974  3334444 333333322211000       0000112    23367788888


Q ss_pred             HHHHHhcCCccEEEEcCC
Q 041914           83 DSTVQNYGQLDIMFSNAG  100 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag  100 (264)
                      +++......=.+++..++
T Consensus        80 ~~l~~~~~~~~ii~d~~s   97 (171)
T d2g5ca2          80 KKLSYILSEDATVTDQGS   97 (171)
T ss_dssp             HHHHHHSCTTCEEEECCS
T ss_pred             hhhhcccccccccccccc
Confidence            888876654455555544

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.07  E-value=0.092  Score=35.33  Aligned_cols=37  Identities=27%  Similarity=0.374  Sum_probs=31.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        28 ~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~~   64 (123)
T d1nhpa2          28 PEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILDR   64 (123)
T ss_dssp             TTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecCc
Confidence            35788888865 79999999999999999988877654

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=93.00  E-value=0.15  Score=37.00  Aligned_cols=39  Identities=21%  Similarity=0.109  Sum_probs=33.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++.++++.|. |.|.||+.+++.+...|.+|+...+..
T Consensus        39 ~~~l~~~~vgii-G~G~IG~~va~~l~~fg~~v~~~d~~~   77 (188)
T d1sc6a1          39 SFEARGKKLGII-GYGHIGTQLGILAESLGMYVYFYDIEN   77 (188)
T ss_dssp             CCCSTTCEEEEE-CCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred             cccccceEEEEe-ecccchhhhhhhcccccceEeeccccc
Confidence            457899999999 579999999999999999977776543

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=92.91  E-value=0.14  Score=36.03  Aligned_cols=81  Identities=11%  Similarity=0.208  Sum_probs=48.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----C-----CcEEEEEecCCCHHHHHHHH---HHH
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----V-----GKCHYVHCDVTNECQVKALV---DST   85 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~D~s~~~~~~~~~---~~~   85 (264)
                      +-|. |.|-+|..+|+.|+++|++|.+..|+.++. +.+.+...    .     .+..++-+=+.+.++++.++   +.+
T Consensus         3 IgiI-GlG~MG~~~A~~L~~~G~~V~~~d~~~~~~-~~~~~~~~~~~~~~~e~~~~~d~ii~~v~~~~~v~~v~~~~~~~   80 (161)
T d1vpda2           3 VGFI-GLGIMGKPMSKNLLKAGYSLVVSDRNPEAI-ADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGI   80 (161)
T ss_dssp             EEEE-CCSTTHHHHHHHHHHTTCEEEEECSCHHHH-HHHHHTTCEECSSHHHHHHHCSEEEECCSSHHHHHHHHHSTTCH
T ss_pred             EEEE-ehhHHHHHHHHHHHHCCCeEEEEeCCcchh-HHHHHhhhhhcccHHHHHhCCCeEEEEcCCHHHHHHHHhCCcch
Confidence            4455 459999999999999999976655554443 33332210    0     12334555667777877776   334


Q ss_pred             HHhcCCccEEEEcCC
Q 041914           86 VQNYGQLDIMFSNAG  100 (264)
Q Consensus        86 ~~~~~~id~lv~~ag  100 (264)
                      .....+=+++|.+..
T Consensus        81 ~~~~~~g~iiid~sT   95 (161)
T d1vpda2          81 IEGAKPGTVLIDMSS   95 (161)
T ss_dssp             HHHCCTTCEEEECSC
T ss_pred             hhccCCCCEEEECCC
Confidence            444334456665543

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.27  Score=32.88  Aligned_cols=35  Identities=14%  Similarity=0.234  Sum_probs=30.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        22 pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~   56 (125)
T d3grsa2          22 PGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK   56 (125)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence            478888887 57999999999999999999988653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=92.68  E-value=0.1  Score=34.98  Aligned_cols=36  Identities=19%  Similarity=0.215  Sum_probs=30.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      +|+++|.|| |.+|.++|..|++.|.+|.++.+.+..
T Consensus        30 ~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~   65 (121)
T d1d7ya2          30 QSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL   65 (121)
T ss_dssp             TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST
T ss_pred             CCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc
Confidence            578887775 899999999999999999998877653

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=92.60  E-value=0.23  Score=32.98  Aligned_cols=35  Identities=17%  Similarity=0.101  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.|.+.
T Consensus        22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   56 (117)
T d1onfa2          22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR   56 (117)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred             CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence            477888776 89999999999999999999887654

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.49  E-value=0.48  Score=33.16  Aligned_cols=82  Identities=11%  Similarity=0.085  Sum_probs=47.4

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----C-----CcEEEEEecCCCHHHHHHHHHH---
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----V-----GKCHYVHCDVTNECQVKALVDS---   84 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~-----~~~~~~~~D~s~~~~~~~~~~~---   84 (264)
                      +|-+. |.|-+|.++|++|.++|++|.+..|+.... +.+.....    .     .....+..-+.+.+.++.++..   
T Consensus         3 kIg~I-GlG~MG~~iA~~L~~~g~~v~~~d~~~~~~-~~~~~~~~~~~~~~~e~~~~~diii~~v~~~~~~~~v~~~~~~   80 (162)
T d3cuma2           3 QIAFI-GLGHMGAPMATNLLKAGYLLNVFDLVQSAV-DGLVAAGASAARSARDAVQGADVVISMLPASQHVEGLYLDDDG   80 (162)
T ss_dssp             EEEEE-CCSTTHHHHHHHHHHTTCEEEEECSSHHHH-HHHHHTTCEECSSHHHHHTSCSEEEECCSCHHHHHHHHHSTTC
T ss_pred             EEEEE-EEHHHHHHHHHHHHHCCCeEEEEECchhhh-hhhhhhhccccchhhhhccccCeeeecccchhhHHHHHhcccc
Confidence            34555 569999999999999999976665554443 33222210    0     1223455556667777766543   


Q ss_pred             HHHhcCCccEEEEcCC
Q 041914           85 TVQNYGQLDIMFSNAG  100 (264)
Q Consensus        85 ~~~~~~~id~lv~~ag  100 (264)
                      +.....+=+++|.+..
T Consensus        81 ~~~~l~~g~iiid~st   96 (162)
T d3cuma2          81 LLAHIAPGTLVLECST   96 (162)
T ss_dssp             HHHHSCTTCEEEECSC
T ss_pred             ccccCCCCCEEEECCC
Confidence            3333333356665543

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=92.44  E-value=0.22  Score=33.32  Aligned_cols=36  Identities=17%  Similarity=0.271  Sum_probs=30.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .|+++|.|| |-+|.++|..|.+.|.+|.++.|.+..
T Consensus        25 p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~   60 (123)
T d1dxla2          25 PKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI   60 (123)
T ss_dssp             CSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred             CCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence            477888876 899999999999999999998887654

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=92.15  E-value=0.3  Score=36.86  Aligned_cols=35  Identities=23%  Similarity=0.470  Sum_probs=30.1

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEec
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIAD   47 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~   47 (264)
                      +|+.++|+|.| .||+|..++..|++.|..-+.+.+
T Consensus        27 kL~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD   61 (247)
T d1jw9b_          27 ALKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLD   61 (247)
T ss_dssp             HHHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEEC
T ss_pred             HHhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEEC
Confidence            47889999999 689999999999999997666543

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=92.03  E-value=0.092  Score=40.25  Aligned_cols=37  Identities=22%  Similarity=0.402  Sum_probs=33.2

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .+|+||+++|-| .|.+|..+++.|.+.|++|+.+++.
T Consensus        32 ~~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD~   68 (255)
T d1bgva1          32 DTLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSGP   68 (255)
T ss_dssp             CCSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEET
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEecC
Confidence            468999999998 7999999999999999998888763

>d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=92.01  E-value=0.069  Score=35.01  Aligned_cols=41  Identities=15%  Similarity=0.217  Sum_probs=33.9

Q ss_pred             ccccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914            9 AKNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus         9 ~~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ...+++||+|+|.|++ --|..+|..|++.+.+++++.++..
T Consensus        26 ~~~~f~gK~VlVVG~g-~Sa~dia~~l~~~ak~v~~~~~r~~   66 (107)
T d2gv8a2          26 EPELFVGESVLVVGGA-SSANDLVRHLTPVAKHPIYQSLLGG   66 (107)
T ss_dssp             CGGGGTTCCEEEECSS-HHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred             chhhcCCCeEEEECCC-CCHHHHHHHHHHhcCEEEEEEecCc
Confidence            3556899999999975 7788999999999988777777654

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.87  E-value=0.18  Score=35.67  Aligned_cols=42  Identities=26%  Similarity=0.400  Sum_probs=33.8

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      ...|.||+++|.| .|-+|+.+|+.|...|++|++....+-+.
T Consensus        19 ~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~a   60 (163)
T d1li4a1          19 DVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINA   60 (163)
T ss_dssp             CCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHH
T ss_pred             CceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchh
Confidence            3458999999997 46899999999999999977666655443

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.63  E-value=0.12  Score=39.18  Aligned_cols=37  Identities=35%  Similarity=0.595  Sum_probs=33.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      .+|+||+++|-| .|.+|..+|+.|.+.|++|+.+++.
T Consensus        27 ~~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          27 GGIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             SCCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             CCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence            368999999986 8999999999999999998887764

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=91.41  E-value=0.7  Score=32.71  Aligned_cols=76  Identities=13%  Similarity=0.159  Sum_probs=46.3

Q ss_pred             CCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC--------------------CcEEEEEecCCCHHHHHHHH
Q 041914           23 GASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV--------------------GKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        23 as~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~D~s~~~~~~~~~   82 (264)
                      |.|-+|.+++++|+++|++|.+..|+.++ .+.+.+....                    .....+..-+.+...+...+
T Consensus         8 GlG~MG~~ma~~L~~~G~~V~~~dr~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (178)
T d1pgja2           8 GLGVMGANLALNIAEKGFKVAVFNRTYSK-SEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATDSTI   86 (178)
T ss_dssp             CCSHHHHHHHHHHHHTTCCEEEECSSHHH-HHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHHHHH
T ss_pred             eehHHHHHHHHHHHHCCCeEEEEECCHHH-HHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhhhhh
Confidence            67899999999999999997655554444 3444332211                    11123333445556666667


Q ss_pred             HHHHHhcCCccEEEEcC
Q 041914           83 DSTVQNYGQLDIMFSNA   99 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~a   99 (264)
                      +.+......=++++...
T Consensus        87 ~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          87 EQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHCCTTCEEEECC
T ss_pred             hhhhhhccccceecccC
Confidence            77766655546666554

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=91.41  E-value=0.17  Score=33.66  Aligned_cols=35  Identities=20%  Similarity=0.279  Sum_probs=30.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++++|.|| |.||..+|..|++.|.+|.++.+.+.
T Consensus        22 p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          22 PGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             CCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeecc
Confidence            477888876 89999999999999999998887654

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=91.40  E-value=0.11  Score=39.96  Aligned_cols=33  Identities=21%  Similarity=0.217  Sum_probs=27.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      +|+|+|.|| |.-|...|.+|+++|.+|+++-++
T Consensus         1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~   33 (373)
T d1seza1           1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAE   33 (373)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSS
T ss_pred             CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCC
Confidence            588889876 667889999999999998887654

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=91.31  E-value=0.12  Score=37.30  Aligned_cols=35  Identities=11%  Similarity=0.155  Sum_probs=28.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGAR-MIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~   50 (264)
                      +|+|+|.|| |..|...|..|+++|++ |.++.+...
T Consensus         4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            688888886 78999999999999985 777766543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=91.28  E-value=0.4  Score=37.81  Aligned_cols=114  Identities=14%  Similarity=0.232  Sum_probs=63.1

Q ss_pred             CCCcEEEEeCC-CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh---hCCCcEEEEEecCCCHHHHHHHHHHHHHh
Q 041914           13 LEGKVAIITGG-ASGIGETTARLFADHGARMIVIADIQDELGRQVATS---IGVGKCHYVHCDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        13 l~~k~vlItGa-s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~---~~~~~~~~~~~D~s~~~~~~~~~~~~~~~   88 (264)
                      .+|++||=.++ +|+.+.+    ++..+.+|+.+..+.... +..++.   .+-.++.++..|..+.      .+...+.
T Consensus       144 ~~g~rVLDl~~gtG~~s~~----~a~g~~~V~~vD~s~~al-~~a~~n~~~ngl~~~~~i~~d~~~~------~~~~~~~  212 (318)
T d1wxxa2         144 FRGERALDVFSYAGGFALH----LALGFREVVAVDSSAEAL-RRAEENARLNGLGNVRVLEANAFDL------LRRLEKE  212 (318)
T ss_dssp             CCEEEEEEETCTTTHHHHH----HHHHEEEEEEEESCHHHH-HHHHHHHHHTTCTTEEEEESCHHHH------HHHHHHT
T ss_pred             hCCCeeeccCCCCcHHHHH----HHhcCCcEEeecchHHHH-HHHHHHHHHcCCCCcceeeccHHHH------hhhhHhh
Confidence            57899998886 4554433    445677766666655443 333222   2224678888876532      3334344


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      ..+.|.+|.++.......     ..   ....    ......+++.+++.++.   +|.+++.+
T Consensus       213 ~~~fD~Vi~DpP~~~~~~-----~~---~~~~----~~~~~~l~~~a~~lLkp---GG~Lv~~s  261 (318)
T d1wxxa2         213 GERFDLVVLDPPAFAKGK-----KD---VERA----YRAYKEVNLRAIKLLKE---GGILATAS  261 (318)
T ss_dssp             TCCEEEEEECCCCSCCST-----TS---HHHH----HHHHHHHHHHHHHTEEE---EEEEEEEE
T ss_pred             hcCCCEEEEcCCccccch-----HH---HHHH----HHHHHHHHHHHHHHcCC---CCEEEEEe
Confidence            457999999987554331     11   1111    11233456666666655   46666544

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=91.20  E-value=0.075  Score=40.10  Aligned_cols=41  Identities=17%  Similarity=0.368  Sum_probs=33.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      ..+|+||+++|-| .|.+|..+++.|.+.|+++++...+...
T Consensus        34 ~~~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~   74 (230)
T d1leha1          34 SDSLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAA   74 (230)
T ss_dssp             SCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHH
T ss_pred             CCCCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHH
Confidence            4469999998876 5889999999999999997766554433

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=91.16  E-value=0.14  Score=34.23  Aligned_cols=35  Identities=31%  Similarity=0.270  Sum_probs=29.3

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      +|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        32 ~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~   66 (122)
T d1xhca2          32 SGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM   66 (122)
T ss_dssp             HSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred             CCcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence            467777765 89999999999999999988887543

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=91.16  E-value=0.27  Score=35.96  Aligned_cols=74  Identities=22%  Similarity=0.271  Sum_probs=47.4

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ..+++||+||=.|+.+|+   ++..++..|+.-++..+.+....+...+..  .++.++.+|+.+.             .
T Consensus        44 ~~dl~Gk~VLDlGcGtG~---l~i~a~~~ga~~V~~vDid~~a~~~ar~N~--~~~~~~~~D~~~l-------------~  105 (197)
T d1ne2a_          44 DGNIGGRSVIDAGTGNGI---LACGSYLLGAESVTAFDIDPDAIETAKRNC--GGVNFMVADVSEI-------------S  105 (197)
T ss_dssp             HTSSBTSEEEEETCTTCH---HHHHHHHTTBSEEEEEESCHHHHHHHHHHC--TTSEEEECCGGGC-------------C
T ss_pred             cCCCCCCEEEEeCCCCcH---HHHHHHHcCCCcccccccCHHHHHHHHHcc--ccccEEEEehhhc-------------C
Confidence            347899999999977663   234466677663444444444444433332  3567888888532             2


Q ss_pred             CCccEEEEcCCC
Q 041914           90 GQLDIMFSNAGI  101 (264)
Q Consensus        90 ~~id~lv~~ag~  101 (264)
                      +++|++|.|+..
T Consensus       106 ~~fD~Vi~NPPf  117 (197)
T d1ne2a_         106 GKYDTWIMNPPF  117 (197)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CcceEEEeCccc
Confidence            589999999765

>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Dethiobiotin synthetase
species: Escherichia coli [TaxId: 562]

Probab=90.98  E-value=0.079  Score=39.00  Aligned_cols=31  Identities=19%  Similarity=0.220  Sum_probs=27.7

Q ss_pred             cEEEEeCCCChhHH-----HHHHHHHHcCCcEEEEe
Q 041914           16 KVAIITGGASGIGE-----TTARLFADHGARMIVIA   46 (264)
Q Consensus        16 k~vlItGas~giG~-----~ia~~l~~~g~~v~~~~   46 (264)
                      |+++|||-..|.|+     .+++.|+++|.+|+++.
T Consensus         2 ~~~~i~gt~~GVGKTtvs~~La~aLa~~G~rVl~id   37 (224)
T d1byia_           2 KRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK   37 (224)
T ss_dssp             EEEEEEESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred             ceEEEEECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence            78999999989998     78999999999987764

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=90.86  E-value=1.6  Score=30.70  Aligned_cols=80  Identities=18%  Similarity=0.299  Sum_probs=54.2

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhcCCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNYGQL   92 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~~i   92 (264)
                      ....+++|.|+ |-.|.+-++.....|+.|.++..+.+.+ +.+...... .   +..-.++.+.+.+.+.       +-
T Consensus        30 v~pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l-~~l~~~~~~-~---~~~~~~~~~~l~~~~~-------~a   96 (168)
T d1pjca1          30 VKPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERL-SYLETLFGS-R---VELLYSNSAEIETAVA-------EA   96 (168)
T ss_dssp             BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHH-HHHHHHHGG-G---SEEEECCHHHHHHHHH-------TC
T ss_pred             CCCcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHH-HHHHHhhcc-c---ceeehhhhhhHHHhhc-------cC
Confidence            45678888886 6778899999999999987777765554 444444332 2   2333456666655554       67


Q ss_pred             cEEEEcCCCCCCC
Q 041914           93 DIMFSNAGILSSS  105 (264)
Q Consensus        93 d~lv~~ag~~~~~  105 (264)
                      |++|.++-+....
T Consensus        97 DivI~aalipG~~  109 (168)
T d1pjca1          97 DLLIGAVLVPGRR  109 (168)
T ss_dssp             SEEEECCCCTTSS
T ss_pred             cEEEEeeecCCcc
Confidence            9999998765443

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=90.83  E-value=0.21  Score=33.08  Aligned_cols=37  Identities=19%  Similarity=0.399  Sum_probs=31.3

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..+|+++|.|| |.+|..+|..|++.|.+|.++.+.+.
T Consensus        20 ~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          20 EPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             CCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             CCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccch
Confidence            35788888775 89999999999999999888887654

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=90.74  E-value=0.21  Score=34.73  Aligned_cols=38  Identities=16%  Similarity=0.239  Sum_probs=30.6

Q ss_pred             CCcEEEEe-CCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIIT-GGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlIt-Gas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .++.++|. .+++.+|.++|..|++.|.+|.++.+...-
T Consensus        38 ~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~~   76 (156)
T d1djqa2          38 IGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLA   76 (156)
T ss_dssp             CCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCTT
T ss_pred             cCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCcc
Confidence            35555555 467899999999999999999999886543

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=90.70  E-value=0.46  Score=31.78  Aligned_cols=35  Identities=23%  Similarity=0.397  Sum_probs=29.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++++|.|| |-||.++|..|.+.|.+|.++.+.+.
T Consensus        26 p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~   60 (125)
T d1ojta2          26 PGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG   60 (125)
T ss_dssp             CSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence            478888876 89999999999999999988877543

>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=90.65  E-value=0.46  Score=31.94  Aligned_cols=77  Identities=13%  Similarity=0.171  Sum_probs=50.3

Q ss_pred             CCCcEEEEeCCCC----------hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHH
Q 041914           13 LEGKVAIITGGAS----------GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALV   82 (264)
Q Consensus        13 l~~k~vlItGas~----------giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~   82 (264)
                      -..|++||.|+..          --+.+.+++|.+.|++++++-.+++.......   -.+++.+.   --+.+.+.+.+
T Consensus         5 ~~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d---~aD~lYfe---Plt~e~v~~Ii   78 (127)
T d1a9xa3           5 TDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPE---MADATYIE---PIHWEVVRKII   78 (127)
T ss_dssp             SSCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGG---GSSEEECS---CCCHHHHHHHH
T ss_pred             CCCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChh---hcceeeee---cCCHHHHHHHH
Confidence            3568999999853          45668999999999999888888776533211   11233333   33355666665


Q ss_pred             HHHHHhcCCccEEEEcCC
Q 041914           83 DSTVQNYGQLDIMFSNAG  100 (264)
Q Consensus        83 ~~~~~~~~~id~lv~~ag  100 (264)
                      +.-     ++|.++...|
T Consensus        79 ~~E-----~pd~il~~~G   91 (127)
T d1a9xa3          79 EKE-----RPDAVLPTMG   91 (127)
T ss_dssp             HHH-----CCSEEECSSS
T ss_pred             HHh-----CcCCeEEEee
Confidence            543     7899986655

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=90.59  E-value=1.7  Score=29.58  Aligned_cols=110  Identities=15%  Similarity=0.110  Sum_probs=61.0

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCchhhHHHHHhhh---C--CCcEEEEE-ecCCCHHHHHHHHHHHHHh
Q 041914           17 VAIITGGASGIGETTARLFADHGA--RMIVIADIQDELGRQVATSI---G--VGKCHYVH-CDVTNECQVKALVDSTVQN   88 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~~~~~~~~~~~~---~--~~~~~~~~-~D~s~~~~~~~~~~~~~~~   88 (264)
                      ++.|.|+ |.+|.+++..|+.+|.  +++++..+++.......+..   .  ........ .|..              .
T Consensus         2 KI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~--------------~   66 (142)
T d1ojua1           2 KLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS--------------L   66 (142)
T ss_dssp             EEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG--------------G
T ss_pred             EEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH--------------H
Confidence            4667786 9999999999998874  34554444333222211111   1  11222222 2321              1


Q ss_pred             cCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           89 YGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        89 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      ..+-|++|..+|....+     ..+   -.+.+..|+    .+++...+.+.+..+++.++++|.
T Consensus        67 ~~~adiVvitag~~~~~-----g~~---r~~l~~~n~----~i~~~i~~~i~~~~p~aivivvtN  119 (142)
T d1ojua1          67 LKGSEIIVVTAGLARKP-----GMT---RLDLAHKNA----GIIKDIAKKIVENAPESKILVVTN  119 (142)
T ss_dssp             GTTCSEEEECCCCCCCS-----SCC---HHHHHHHHH----HHHHHHHHHHHTTSTTCEEEECSS
T ss_pred             hccccEEEEeccccCCC-----CCc---hHHHHHHhh----HHHHHHHHHHHhhCCCcEEEEecC
Confidence            12679999999865432     122   234444444    456667777777665677777663

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=90.47  E-value=0.25  Score=34.84  Aligned_cols=39  Identities=23%  Similarity=0.315  Sum_probs=32.4

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      -+.||+++|.| -|-+|+.+|++|...|++|+++-..+-.
T Consensus        20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~   58 (163)
T d1v8ba1          20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPIC   58 (163)
T ss_dssp             CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHH
T ss_pred             eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchh
Confidence            37899999987 6889999999999999997776665543

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=90.43  E-value=0.21  Score=32.97  Aligned_cols=35  Identities=20%  Similarity=0.329  Sum_probs=29.0

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .|+++|.|| |.+|.++|..|++.|.+|.++.+.+.
T Consensus        21 p~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECC-CHHHHHHHHHHhhcccceEEEeeecc
Confidence            467777754 89999999999999999988877654

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=90.35  E-value=0.19  Score=37.53  Aligned_cols=34  Identities=24%  Similarity=0.335  Sum_probs=28.5

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      .|+|+|.|| |-.|...|..|+++|.+|.++.+..
T Consensus         6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~   39 (268)
T d1c0pa1           6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL   39 (268)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred             CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            356888876 7889999999999999998888753

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=90.19  E-value=0.24  Score=33.62  Aligned_cols=37  Identities=14%  Similarity=0.183  Sum_probs=31.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .+|+++|.|| |.+|.++|..|++.|.+|.++.+.+..
T Consensus        34 ~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~~~   70 (133)
T d1q1ra2          34 ADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAARV   70 (133)
T ss_dssp             TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred             cCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecccc
Confidence            4688888865 899999999999999999988876653

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=89.88  E-value=0.22  Score=33.26  Aligned_cols=32  Identities=19%  Similarity=0.261  Sum_probs=27.5

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      ++++|.|| |-||.++|..|.+.|.+|.++.+.
T Consensus        21 ~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          21 GKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence            56777765 899999999999999999988764

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=89.76  E-value=0.25  Score=38.39  Aligned_cols=38  Identities=16%  Similarity=0.319  Sum_probs=33.0

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecC
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADI   48 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~   48 (264)
                      ..+|+||+++|-|- |-+|..+|+.|.+.|++|+.++..
T Consensus        31 ~~~L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD~   68 (293)
T d1hwxa1          31 TPGFGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGES   68 (293)
T ss_dssp             CSSSTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEET
T ss_pred             CCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEcc
Confidence            34789999999876 899999999999999998888753

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=89.65  E-value=0.24  Score=35.61  Aligned_cols=37  Identities=16%  Similarity=0.186  Sum_probs=31.6

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .++|+|+|.|| |.-|.+.|..|+++|++|.++-+.+.
T Consensus        41 ~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence            46799999986 78899999999999999888876554

>d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=89.59  E-value=0.91  Score=31.36  Aligned_cols=80  Identities=9%  Similarity=0.017  Sum_probs=49.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC-------CcEEEEEecCCCHHHHHHHHHHHHHhcC
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV-------GKCHYVHCDVTNECQVKALVDSTVQNYG   90 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~D~s~~~~~~~~~~~~~~~~~   90 (264)
                      +-+.|- |-+|.+++++|.++|.. ++..|..++..+...+....       .....+-..+.+.+.+....+.+.+...
T Consensus         3 Ig~IGl-G~MG~~ma~~L~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~l~~~~~   80 (156)
T d2cvza2           3 VAFIGL-GAMGYPMAGHLARRFPT-LVWNRTFEKALRHQEEFGSEAVPLERVAEARVIFTCLPTTREVYEVAEALYPYLR   80 (156)
T ss_dssp             EEEECC-STTHHHHHHHHHTTSCE-EEECSSTHHHHHHHHHHCCEECCGGGGGGCSEEEECCSSHHHHHHHHHHHTTTCC
T ss_pred             EEEEeH-HHHHHHHHHHHHhCCCE-EEEeCCHHHHHHHHHHcCCcccccccccceeEEEecccchhhhhhhhcccccccc
Confidence            445554 89999999999999976 55666655544433322110       1233344556677788877777766554


Q ss_pred             CccEEEEcC
Q 041914           91 QLDIMFSNA   99 (264)
Q Consensus        91 ~id~lv~~a   99 (264)
                      +-.++|.+.
T Consensus        81 ~~~~iid~s   89 (156)
T d2cvza2          81 EGTYWVDAT   89 (156)
T ss_dssp             TTEEEEECS
T ss_pred             ccccccccc
Confidence            555555554

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=89.30  E-value=3.9  Score=31.80  Aligned_cols=142  Identities=13%  Similarity=0.141  Sum_probs=72.7

Q ss_pred             CCcEEEEeCC-CChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhh---C--CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           14 EGKVAIITGG-ASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSI---G--VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        14 ~~k~vlItGa-s~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      .|++||=..+ +|+.+.+    .+..|+. |+.+....... +...+..   .  ..++.++..|..      ..++...
T Consensus       144 ~g~~VLdlf~~~G~~sl~----aa~~ga~~V~~vD~s~~a~-~~a~~N~~~n~l~~~~~~~i~~d~~------~~l~~~~  212 (317)
T d2b78a2         144 AGKTVLNLFSYTAAFSVA----AAMGGAMATTSVDLAKRSR-ALSLAHFEANHLDMANHQLVVMDVF------DYFKYAR  212 (317)
T ss_dssp             BTCEEEEETCTTTHHHHH----HHHTTBSEEEEEESCTTHH-HHHHHHHHHTTCCCTTEEEEESCHH------HHHHHHH
T ss_pred             CCCceeecCCCCcHHHHH----HHhCCCceEEEecCCHHHH-HHHHHHHHHhcccCcceEEEEccHH------HHHHHHH
Confidence            5888887765 5555533    4456775 55555444433 2222221   1  246888888874      3344555


Q ss_pred             HhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchh
Q 041914           87 QNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDY  166 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y  166 (264)
                      +...+.|++|..+..........+.  .          ......+++.+++.++.   +|.+++.| ....         
T Consensus       213 ~~~~~fD~Ii~DPP~f~~~~~~~~~--~----------~~~~~~L~~~a~~ll~p---gG~l~~~s-cs~~---------  267 (317)
T d2b78a2         213 RHHLTYDIIIIDPPSFARNKKEVFS--V----------SKDYHKLIRQGLEILSE---NGLIIAST-NAAN---------  267 (317)
T ss_dssp             HTTCCEEEEEECCCCC-----CCCC--H----------HHHHHHHHHHHHHTEEE---EEEEEEEE-CCTT---------
T ss_pred             hhcCCCCEEEEcChhhccchhHHHH--H----------HHHHHHHHHHHHHHcCC---CCEEEEEe-CCcc---------
Confidence            5556899999997755433211111  1          12234466677776665   35555443 3211         


Q ss_pred             hchHHHHHHHHHHHHHHhCcCCceEEEee
Q 041914          167 HMSKHAVIGLVRSASVQLGVHGIRVNCVS  195 (264)
Q Consensus       167 ~~sK~al~~~~~~la~e~~~~~i~v~~v~  195 (264)
                       .+   .+.|.+.+...+...+..+..+.
T Consensus       268 -~~---~~~f~~~v~~a~~~~~~~~~~~~  292 (317)
T d2b78a2         268 -MT---VSQFKKQIEKGFGKQKHTYLDLQ  292 (317)
T ss_dssp             -SC---HHHHHHHHHHHHTTCCCEEEEEE
T ss_pred             -CC---HHHHHHHHHHHHHHcCCeEEEec
Confidence             11   22344444444555666666554

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=89.16  E-value=1.2  Score=34.85  Aligned_cols=113  Identities=12%  Similarity=0.128  Sum_probs=61.5

Q ss_pred             CCcEEEEeCC-CChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHHhhh---CC-CcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           14 EGKVAIITGG-ASGIGETTARLFADHGAR-MIVIADIQDELGRQVATSI---GV-GKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        14 ~~k~vlItGa-s~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .|++||=.++ +|+.+..    ++..|+. |+.+..+.. ..+...+..   +- .+++++..|+.      .....+..
T Consensus       145 ~g~~VLDl~~g~G~~si~----~a~~ga~~V~~vD~s~~-al~~a~~N~~~ngl~~~~~~~~~d~~------~~~~~~~~  213 (324)
T d2as0a2         145 PGDRVLDVFTYTGGFAIH----AAIAGADEVIGIDKSPR-AIETAKENAKLNGVEDRMKFIVGSAF------EEMEKLQK  213 (324)
T ss_dssp             TTCEEEETTCTTTHHHHH----HHHTTCSEEEEEESCHH-HHHHHHHHHHHTTCGGGEEEEESCHH------HHHHHHHH
T ss_pred             CCCeeecccCcccchhhh----hhhcCCcEEEeecCCHH-HHHHHHHHHHHcCCCccceeeechhh------hhhHHHHh
Confidence            4788888886 4555544    3456764 555554444 333332222   21 36778877764      22344444


Q ss_pred             hcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEec
Q 041914           88 NYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTA  152 (264)
Q Consensus        88 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~is  152 (264)
                      ...+.|.+|.++.......        ......    ......+++.+++.++.   +|.+++.+
T Consensus       214 ~~~~fD~Vi~DpP~~~~~~--------~~~~~~----~~~y~~l~~~a~~ll~p---GG~lv~~s  263 (324)
T d2as0a2         214 KGEKFDIVVLDPPAFVQHE--------KDLKAG----LRAYFNVNFAGLNLVKD---GGILVTCS  263 (324)
T ss_dssp             TTCCEEEEEECCCCSCSSG--------GGHHHH----HHHHHHHHHHHHTTEEE---EEEEEEEE
T ss_pred             ccCCCCchhcCCccccCCH--------HHHHHH----HHHHHHHHHHHHHHcCC---CcEEEEEe
Confidence            4468999999887554321        111211    22344466666666655   46666655

>d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Ubiquitin activating enzymes (UBA)
domain: UBA3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.69  E-value=0.13  Score=42.53  Aligned_cols=32  Identities=28%  Similarity=0.428  Sum_probs=26.7

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEE
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGAR-MIVI   45 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~   45 (264)
                      |+..+|||.|+ ||+|.++++.|+..|.. +.++
T Consensus        35 l~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lv   67 (426)
T d1yovb1          35 LDTCKVLVIGA-GGLGCELLKNLALSGFRQIHVI   67 (426)
T ss_dssp             HHHCCEEEECS-STTHHHHHHHHHTTTCCCEEEE
T ss_pred             HhcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEE
Confidence            56778999998 77999999999999995 4444

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=88.65  E-value=0.37  Score=33.36  Aligned_cols=39  Identities=13%  Similarity=0.121  Sum_probs=29.2

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHH
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVA   57 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   57 (264)
                      +-|. |.|-+|.++++.|.++|+++++..++..+..+...
T Consensus         3 IgiI-G~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~   41 (152)
T d1i36a2           3 VGFI-GFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERA   41 (152)
T ss_dssp             EEEE-SCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHH
T ss_pred             EEEE-cHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhh
Confidence            4455 56999999999999999997776666655544433

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=88.58  E-value=0.3  Score=34.21  Aligned_cols=35  Identities=20%  Similarity=0.350  Sum_probs=27.7

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCC--cEEEEecCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGA--RMIVIADIQ   49 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~--~v~~~~~~~   49 (264)
                      .||+++|.|| |..|..+|..|.+.+.  +|.++.+.+
T Consensus         1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            4899999997 6679999999999885  566665443

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.51  E-value=0.81  Score=35.63  Aligned_cols=76  Identities=16%  Similarity=0.183  Sum_probs=47.1

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHh--hh-CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT--SI-GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      ..++||+||-.|+..|+   ++..+++.|+..+.....++........  .. ...++.++..|+.+...          
T Consensus        32 ~~~~~~~VLDiGcG~G~---lsl~aa~~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~~~~l~~----------   98 (311)
T d2fyta1          32 HIFKDKVVLDVGCGTGI---LSMFAAKAGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL----------   98 (311)
T ss_dssp             GGTTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCC----------
T ss_pred             ccCCcCEEEEECCCCCH---HHHHHHHcCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEeeHHHhcC----------
Confidence            34689999999988775   5667888898634433344433222211  11 22578999998876421          


Q ss_pred             hcCCccEEEEcC
Q 041914           88 NYGQLDIMFSNA   99 (264)
Q Consensus        88 ~~~~id~lv~~a   99 (264)
                      ...+.|++|...
T Consensus        99 ~~~~~D~Ivse~  110 (311)
T d2fyta1          99 PVEKVDVIISEW  110 (311)
T ss_dssp             SCSCEEEEEECC
T ss_pred             ccccceEEEEee
Confidence            114789998753

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=88.35  E-value=0.35  Score=36.29  Aligned_cols=35  Identities=26%  Similarity=0.266  Sum_probs=29.0

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      ..++|+|.|| |--|..+|..|+++|.+|+++-+..
T Consensus         3 ~~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            4578889887 6778899999999999988887654

>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=88.23  E-value=0.22  Score=36.92  Aligned_cols=33  Identities=21%  Similarity=0.562  Sum_probs=29.3

Q ss_pred             CcEEEEeCCCChhHH-----HHHHHHHHcCCcEEEEec
Q 041914           15 GKVAIITGGASGIGE-----TTARLFADHGARMIVIAD   47 (264)
Q Consensus        15 ~k~vlItGas~giG~-----~ia~~l~~~g~~v~~~~~   47 (264)
                      +|++.|+|+-||.|+     ++|..|++.|.+|+++.-
T Consensus         2 ~~vIav~~~kGGvGKTtia~nLA~~la~~g~~VlliD~   39 (237)
T d1g3qa_           2 GRIISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDG   39 (237)
T ss_dssp             CEEEEEECSSTTSSHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             CeEEEEECCCCCCcHHHHHHHHHHHHHhCCCCEEEEeC
Confidence            689999999999998     788999999999888863

>d1wy7a1 c.66.1.32 (A:4-204) Hypothetical protein PH1948 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein PH1948
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=88.21  E-value=1.3  Score=32.04  Aligned_cols=76  Identities=22%  Similarity=0.306  Sum_probs=46.6

Q ss_pred             cccCCCcEEEEeCCCCh-hHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC--CCcEEEEEecCCCHHHHHHHHHHHH
Q 041914           10 KNKLEGKVAIITGGASG-IGETTARLFADHGARMIVIADIQDELGRQVATSIG--VGKCHYVHCDVTNECQVKALVDSTV   86 (264)
Q Consensus        10 ~~~l~~k~vlItGas~g-iG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~D~s~~~~~~~~~~~~~   86 (264)
                      ..+++|++||=.|+..| ++.+    ++..|+.-+.....+....+.+.+...  ..+..++..|..+.           
T Consensus        42 ~~dl~g~~vLDlg~GtG~l~i~----a~~~g~~~v~~vdi~~~~~~~a~~N~~~~~~~~~~~~~d~~~~-----------  106 (201)
T d1wy7a1          42 LGDIEGKVVADLGAGTGVLSYG----ALLLGAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSEF-----------  106 (201)
T ss_dssp             TTSSTTCEEEEETCTTCHHHHH----HHHTTCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGGC-----------
T ss_pred             cCCCCCCEEEECcCcchHHHHH----HHHcCCCEEEEEcCcHHHHHHHHHHHHHcCCCceEEECchhhh-----------
Confidence            45789999999996544 5443    456776433444444444443333222  24677888886432           


Q ss_pred             HhcCCccEEEEcCCCC
Q 041914           87 QNYGQLDIMFSNAGIL  102 (264)
Q Consensus        87 ~~~~~id~lv~~ag~~  102 (264)
                        .+++|++|.|+...
T Consensus       107 --~~~fD~Vi~nPP~~  120 (201)
T d1wy7a1         107 --NSRVDIVIMNPPFG  120 (201)
T ss_dssp             --CCCCSEEEECCCCS
T ss_pred             --CCcCcEEEEcCccc
Confidence              35799999998764

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.77  E-value=0.37  Score=34.50  Aligned_cols=33  Identities=18%  Similarity=0.331  Sum_probs=27.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ++.|.|+ |..|.++|..|+++|.+|.+..|..+
T Consensus         2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~   34 (180)
T d1txga2           2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFD   34 (180)
T ss_dssp             EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGG
T ss_pred             EEEEECC-CHHHHHHHHHHHHCCCEEEEEEeccc
Confidence            4566765 89999999999999999888887543

>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: UDP-Glycosyltransferase/glycogen phosphorylase
superfamily: UDP-Glycosyltransferase/glycogen phosphorylase
family: Peptidoglycan biosynthesis glycosyltransferase MurG
domain: Peptidoglycan biosynthesis glycosyltransferase MurG
species: Escherichia coli [TaxId: 562]

Probab=87.74  E-value=2.8  Score=32.23  Aligned_cols=33  Identities=18%  Similarity=0.303  Sum_probs=23.2

Q ss_pred             cEEEEeCCCCh-h---HHHHHHHHHHcCCcEEEEecC
Q 041914           16 KVAIITGGASG-I---GETTARLFADHGARMIVIADI   48 (264)
Q Consensus        16 k~vlItGas~g-i---G~~ia~~l~~~g~~v~~~~~~   48 (264)
                      |++||++|+.| -   ..+++++|.++|++|.+++..
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~   37 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA   37 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence            56666664333 2   447999999999998877653

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=87.55  E-value=0.35  Score=33.47  Aligned_cols=23  Identities=9%  Similarity=0.092  Sum_probs=20.0

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc
Q 041914           16 KVAIITGGASGIGETTARLFADH   38 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~   38 (264)
                      |++-|.||||-.|+.+.+.|.++
T Consensus         2 kkVaIvGATG~VGqeli~~Ll~~   24 (146)
T d1t4ba1           2 QNVGFIGWRGMVGSVLMQRMVEE   24 (146)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHT
T ss_pred             cEEEEECCccHHHHHHHHHHHhC
Confidence            46789999999999999988765

>d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Trypanosoma cruzi [TaxId: 5693]

Probab=87.21  E-value=1.1  Score=29.20  Aligned_cols=35  Identities=14%  Similarity=0.134  Sum_probs=26.6

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHc---CCcEEEEecCch
Q 041914           15 GKVAIITGGASGIGETTARLFADH---GARMIVIADIQD   50 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~---g~~v~~~~~~~~   50 (264)
                      .++++|.|| |.+|.++|..|.+.   |.+|.++.+.+.
T Consensus        20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~   57 (117)
T d1aoga2          20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM   57 (117)
T ss_dssp             CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred             CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence            578889988 99999999766654   556888877543

>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Arsenite-translocating ATPase ArsA
species: Escherichia coli [TaxId: 562]

Probab=86.91  E-value=0.32  Score=37.14  Aligned_cols=37  Identities=24%  Similarity=0.284  Sum_probs=30.3

Q ss_pred             CCcEEEEeCCCChhHHH-----HHHHHHHcCCcEEEEecCch
Q 041914           14 EGKVAIITGGASGIGET-----TARLFADHGARMIVIADIQD   50 (264)
Q Consensus        14 ~~k~vlItGas~giG~~-----ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .+++++|+.|-||.|+.     +|..|+++|.+|+++.-...
T Consensus        18 ~~~~iii~sGKGGVGKTT~a~nLA~~lA~~G~rVllvD~Dp~   59 (279)
T d1ihua2          18 NEHGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPA   59 (279)
T ss_dssp             TSCEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEESCCC
T ss_pred             CCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            57777788779999994     58999999999888876544

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=86.88  E-value=0.36  Score=37.34  Aligned_cols=36  Identities=22%  Similarity=0.341  Sum_probs=29.3

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      +.|+|+|.|| |--|...|..|+++|.+|+++-+.+.
T Consensus        29 ~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~~   64 (370)
T d2iida1          29 NPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASER   64 (370)
T ss_dssp             SCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            4578999987 56699999999999999888766543

>d2fr1a2 c.2.1.2 (A:1448-1656) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=86.80  E-value=4.1  Score=29.17  Aligned_cols=143  Identities=11%  Similarity=0.049  Sum_probs=78.0

Q ss_pred             cCCCcEEEEeCCC--ChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHHHHHHhc
Q 041914           12 KLEGKVAIITGGA--SGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVDSTVQNY   89 (264)
Q Consensus        12 ~l~~k~vlItGas--~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~   89 (264)
                      ...|.++++....  .....+++..|.+.|..++.+.-....                      +.+   .+. +.....
T Consensus        22 ~~~g~~lv~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~----------------------~~~---~l~-~~~~~~   75 (209)
T d2fr1a2          22 RLDGTWLVAKYAGTADETSTAAREALESAGARVRELVVDARC----------------------GRD---ELA-ERLRSV   75 (209)
T ss_dssp             CCCSEEEEEECTTSSHHHHHHHHHHHHTTSCEEEEEECCTTC----------------------CHH---HHH-HHHTTS
T ss_pred             CCCCcEEEEeCCCCchHHHHHHHHHHHhCCCeEEEecCCCcc----------------------CHH---HHH-HHhhcc
Confidence            3456666665432  347778888888989886555432211                      111   222 222344


Q ss_pred             CCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCCCCCCCCCCchhhch
Q 041914           90 GQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVAGSCGGKRRTDYHMS  169 (264)
Q Consensus        90 ~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~s  169 (264)
                      +.++.+||..+..........         .....+...+.++|.+..   ... ..++.+++...... .+....-...
T Consensus        76 ~~~~~vv~l~~~~~~~~~~~~---------~~~~~~~~~l~l~qal~~---~~~-~~~l~~vT~~a~~~-~~~d~~~~p~  141 (209)
T d2fr1a2          76 GEVAGVLSLLAVDEAEPEEAP---------LALASLADTLSLVQAMVS---AEL-GCPLWTVTESAVAT-GPFERVRNAA  141 (209)
T ss_dssp             CCCSEEEECTTTTCCCCSSCG---------GGCHHHHHHHHHHHHHHH---TTC-CCCEEEEEESCSCS-STTSCCSCGG
T ss_pred             CCCCeEEEeCCCCCCCCcchh---------HHHHHHHHHHHHHHHHHh---CCC-CCcEEEEEcCCccc-CCCcccCCHh
Confidence            678999998776433211111         112234555666666532   222 34555555433221 1222334568


Q ss_pred             HHHHHHHHHHHHHHhCcCCceEEEe
Q 041914          170 KHAVIGLVRSASVQLGVHGIRVNCV  194 (264)
Q Consensus       170 K~al~~~~~~la~e~~~~~i~v~~v  194 (264)
                      .+++-+|+|+++.|+-...++...+
T Consensus       142 ~A~l~Gl~r~~~~E~P~l~~~~vDl  166 (209)
T d2fr1a2         142 HGALWGVGRVIALENPAVWGGLVDV  166 (209)
T ss_dssp             GHHHHHHHHHHHHHCGGGEEEEEEE
T ss_pred             HHhHHHHHHHHHHhCCCceEEEEEC
Confidence            9999999999999985533444444

>d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Escherichia coli [TaxId: 562]

Probab=86.48  E-value=0.44  Score=33.57  Aligned_cols=82  Identities=13%  Similarity=0.133  Sum_probs=51.1

Q ss_pred             EEEEeCCCChhHHHHHHHHHHc-CCcEEEEecC-chhh-HHHHHhhh-------------C--CCcEEEEEecCCCHHHH
Q 041914           17 VAIITGGASGIGETTARLFADH-GARMIVIADI-QDEL-GRQVATSI-------------G--VGKCHYVHCDVTNECQV   78 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~-g~~v~~~~~~-~~~~-~~~~~~~~-------------~--~~~~~~~~~D~s~~~~~   78 (264)
                      ++.|.|++|-+|+++++...+. +.+++....+ ..+. .+.+.+..             .  .... -+-.|+|.++..
T Consensus         6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~~~~~~~~~-DViIDFs~p~~~   84 (162)
T d1diha1           6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAGAGKTGVTVQSSLDAVKDDF-DVFIDFTRPEGT   84 (162)
T ss_dssp             EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSSSSCCSCCEESCSTTTTTSC-SEEEECSCHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhhccccCCceeeccHHHHhccc-ceEEEeccHHHH
Confidence            6899999999999999988876 5554333322 1111 00000000             0  0011 155799999999


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCC
Q 041914           79 KALVDSTVQNYGQLDIMFSNAGI  101 (264)
Q Consensus        79 ~~~~~~~~~~~~~id~lv~~ag~  101 (264)
                      ...++...+.  ++.+++-..|.
T Consensus        85 ~~~~~~a~~~--~~~~ViGTTG~  105 (162)
T d1diha1          85 LNHLAFCRQH--GKGMVIGTTGF  105 (162)
T ss_dssp             HHHHHHHHHT--TCEEEECCCCC
T ss_pred             HHHHHHHHhc--cceeEEecCCC
Confidence            9999877665  67888766664

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=86.37  E-value=0.44  Score=37.36  Aligned_cols=36  Identities=22%  Similarity=0.338  Sum_probs=29.2

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchh
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIADIQDE   51 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~   51 (264)
                      .|+++|.|| |--|..+|..|+++|.+|+++-.++.-
T Consensus         2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~~i   37 (314)
T d2bi7a1           2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRDHI   37 (314)
T ss_dssp             CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred             CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCCCC
Confidence            578888886 667889999999999998887766543

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=86.06  E-value=0.52  Score=34.97  Aligned_cols=36  Identities=17%  Similarity=0.313  Sum_probs=29.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      -.+|+++|.|| |.-|...|..|+++|++|.++.+..
T Consensus        47 ~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~   82 (233)
T d1djqa3          47 KNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAE   82 (233)
T ss_dssp             SSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             cCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecc
Confidence            36789999987 5668999999999999988876544

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=85.68  E-value=0.46  Score=35.92  Aligned_cols=31  Identities=23%  Similarity=0.340  Sum_probs=26.1

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      |+|.|| |-.|.++|.+|+++|.+|+++.+..
T Consensus         7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            666665 8899999999999999988887754

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=85.50  E-value=1.5  Score=30.19  Aligned_cols=40  Identities=18%  Similarity=0.189  Sum_probs=28.4

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHc--CCcEEEEe-cCchhhHHH
Q 041914           16 KVAIITGGASGIGETTARLFADH--GARMIVIA-DIQDELGRQ   55 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~--g~~v~~~~-~~~~~~~~~   55 (264)
                      |++.|.|+||-||.+...-..++  .++|+.++ .++-+....
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~   44 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVE   44 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHH
T ss_pred             CeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHH
Confidence            67999999999999999888776  45665544 334443333

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=85.17  E-value=0.52  Score=34.51  Aligned_cols=31  Identities=16%  Similarity=0.237  Sum_probs=26.0

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      |+|.| +|--|...|..|+++|.+|+++-+++
T Consensus         8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            56666 67889999999999999988887765

>d1w4xa2 c.3.1.5 (A:155-389) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=84.63  E-value=0.55  Score=34.45  Aligned_cols=40  Identities=18%  Similarity=0.241  Sum_probs=33.2

Q ss_pred             cccCCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           10 KNKLEGKVAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        10 ~~~l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      ..+++||+|+|.|++. -|..+|..+++.+++++.+.|+..
T Consensus        27 ~~~~~gK~V~VvG~G~-Sa~dia~~~~~~~~~~~~~~~~~~   66 (235)
T d1w4xa2          27 PVDFSGQRVGVIGTGS-SGIQVSPQIAKQAAELFVFQRTPH   66 (235)
T ss_dssp             CCCCBTCEEEEECCSH-HHHHHHHHHHHHBSEEEEEESSCC
T ss_pred             CCCCCCCEEEEECCCc-cHHHHHHHHHhhhccccccccccc
Confidence            3468999999998744 589999999999999888887654

>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Cell division regulator MinD
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=84.46  E-value=0.37  Score=35.55  Aligned_cols=32  Identities=16%  Similarity=0.395  Sum_probs=28.1

Q ss_pred             cEEEEeCCCChhHH-----HHHHHHHHcCCcEEEEec
Q 041914           16 KVAIITGGASGIGE-----TTARLFADHGARMIVIAD   47 (264)
Q Consensus        16 k~vlItGas~giG~-----~ia~~l~~~g~~v~~~~~   47 (264)
                      |++.|+++-||.|+     ++|..|+++|.+|+++.-
T Consensus         2 kvIav~s~KGGvGKTtia~nlA~~la~~g~~VlliD~   38 (232)
T d1hyqa_           2 RTITVASGKGGTGKTTITANLGVALAQLGHDVTIVDA   38 (232)
T ss_dssp             EEEEEEESSSCSCHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred             EEEEEECCCCCChHHHHHHHHHHHHHhCCCCEEEEeC
Confidence            78999999999998     678899999999888753

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=84.22  E-value=1.3  Score=30.39  Aligned_cols=40  Identities=15%  Similarity=0.250  Sum_probs=27.5

Q ss_pred             EEEeCCCChhHHHHHHHHHHcC-CcEEEEecCchhhHHHHHhh
Q 041914           18 AIITGGASGIGETTARLFADHG-ARMIVIADIQDELGRQVATS   59 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g-~~v~~~~~~~~~~~~~~~~~   59 (264)
                      +.+.|+ |-+|.++++.|.+.| .++.+..|+ .+..+.+.+.
T Consensus         3 I~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~-~~~~~~l~~~   43 (152)
T d1yqga2           3 VYFLGG-GNMAAAVAGGLVKQGGYRIYIANRG-AEKRERLEKE   43 (152)
T ss_dssp             EEEECC-SHHHHHHHHHHHHHCSCEEEEECSS-HHHHHHHHHH
T ss_pred             EEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCC-hhHHHHhhhh
Confidence            556665 999999999999888 665554444 4444555444

>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538 {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Putative methyltransferase SPy1538
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.16  E-value=4.5  Score=27.41  Aligned_cols=77  Identities=12%  Similarity=0.182  Sum_probs=45.7

Q ss_pred             ccCCCcEEEEeCC-CChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhC----CCcEEEEEecCCCHHHHHHHHHHH
Q 041914           11 NKLEGKVAIITGG-ASGIGETTARLFADHGARMIVIADIQDELGRQVATSIG----VGKCHYVHCDVTNECQVKALVDST   85 (264)
Q Consensus        11 ~~l~~k~vlItGa-s~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~s~~~~~~~~~~~~   85 (264)
                      .+++|+++|=.|+ +|.+|.    +.+.+|+.-+.....+.+..+.+++...    ..++.+++.|..+      +++  
T Consensus        11 ~~~~g~~vlDl~~GtG~~~i----ea~~rga~~v~~ve~~~~a~~~~~~n~~~~~~~~~~~ii~~D~~~------~l~--   78 (152)
T d2esra1          11 PYFNGGRVLDLFAGSGGLAI----EAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAER------AID--   78 (152)
T ss_dssp             SCCCSCEEEEETCTTCHHHH----HHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHH------HHH--
T ss_pred             hhCCCCeEEEcCCccCHHHH----HHHHhCcceeeeehhchhhhhhhhhhhhhcccccchhhhcccccc------ccc--
Confidence            3578999988775 455655    3456787645555555544444443322    1468899888432      222  


Q ss_pred             HHhcCCccEEEEcCC
Q 041914           86 VQNYGQLDIMFSNAG  100 (264)
Q Consensus        86 ~~~~~~id~lv~~ag  100 (264)
                       ...++.|+++..+.
T Consensus        79 -~~~~~fDiIf~DPP   92 (152)
T d2esra1          79 -CLTGRFDLVFLDPP   92 (152)
T ss_dssp             -HBCSCEEEEEECCS
T ss_pred             -ccccccceeEechh
Confidence             22357899987653

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=84.16  E-value=1.3  Score=30.59  Aligned_cols=36  Identities=19%  Similarity=0.115  Sum_probs=26.9

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCch
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQD   50 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~   50 (264)
                      .+++|+|.| +|..|..+|..+.+.|++ |.++.|+..
T Consensus        44 ~~~kVvVIG-GGdtA~D~A~~a~r~GA~~V~vi~rr~~   80 (153)
T d1gtea3          44 IRGAVIVLG-AGDTAFDCATSALRCGARRVFLVFRKGF   80 (153)
T ss_dssp             CCSEEEEEC-SSHHHHHHHHHHHHTTCSEEEEECSSCG
T ss_pred             CCCEEEEEC-CChhHHHHHHHHHHcCCcceeEEEeCCh
Confidence            455677765 478899999999999987 556777653

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=84.02  E-value=0.7  Score=31.90  Aligned_cols=39  Identities=10%  Similarity=0.194  Sum_probs=28.1

Q ss_pred             EEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhh
Q 041914           19 IITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATS   59 (264)
Q Consensus        19 lItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~   59 (264)
                      .+. |+|-+|.++++.|.+.|+++.+..|+.++. +.+.+.
T Consensus         4 g~I-G~G~mG~al~~~l~~~~~~i~v~~r~~~~~-~~l~~~   42 (152)
T d2ahra2           4 GII-GVGKMASAIIKGLKQTPHELIISGSSLERS-KEIAEQ   42 (152)
T ss_dssp             EEE-CCSHHHHHHHHHHTTSSCEEEEECSSHHHH-HHHHHH
T ss_pred             EEE-eccHHHHHHHHHHHhCCCeEEEEcChHHhH-Hhhccc
Confidence            344 679999999999999999976666654443 444433

>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains
species: Escherichia coli [TaxId: 562]

Probab=83.98  E-value=1.4  Score=29.05  Aligned_cols=76  Identities=9%  Similarity=0.095  Sum_probs=48.2

Q ss_pred             CCcEEEEeCCCC----------hhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHHHHHHHHH
Q 041914           14 EGKVAIITGGAS----------GIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNECQVKALVD   83 (264)
Q Consensus        14 ~~k~vlItGas~----------giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~   83 (264)
                      ..|.+||.|+..          --+.+.++.|.+.|++++++-.+++......   .-.+++.+.++   ..+.+.+.++
T Consensus         3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~---d~aD~lYfepl---t~e~v~~Ii~   76 (121)
T d1a9xa4           3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDY---DTSDRLYFEPV---TLEDVLEIVR   76 (121)
T ss_dssp             SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTST---TSSSEEECCCC---SHHHHHHHHH
T ss_pred             CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcCh---hhcCceEEccC---CHHHHHHHHH
Confidence            458899999853          4456899999999999888888776543211   01123333333   3445555544


Q ss_pred             HHHHhcCCccEEEEcCC
Q 041914           84 STVQNYGQLDIMFSNAG  100 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag  100 (264)
                      .-     ++|.++...|
T Consensus        77 ~E-----~p~~ii~~~G   88 (121)
T d1a9xa4          77 IE-----KPKGVIVQYG   88 (121)
T ss_dssp             HH-----CCSEEECSSS
T ss_pred             Hh-----CCCEEEeehh
Confidence            32     7888876655

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.73  E-value=3.7  Score=29.94  Aligned_cols=36  Identities=14%  Similarity=0.184  Sum_probs=27.5

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhh
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDEL   52 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~   52 (264)
                      .+++||..|...|   ..+..|+++|++|+.+.-++...
T Consensus        45 ~~~rvLd~GCG~G---~~a~~LA~~G~~V~gvD~S~~ai   80 (229)
T d2bzga1          45 SGLRVFFPLCGKA---VEMKWFADRGHSVVGVEISELGI   80 (229)
T ss_dssp             CSCEEEETTCTTC---THHHHHHHTTCEEEEECSCHHHH
T ss_pred             CCCEEEEeCCCCc---HHHHHHHhCCCcEEEEeCCHHHH
Confidence            6789999998665   45778899999987776655444

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=83.63  E-value=4.2  Score=28.84  Aligned_cols=86  Identities=15%  Similarity=0.096  Sum_probs=49.4

Q ss_pred             CCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCCCcEEEEEecCCCHH---------------HH
Q 041914           14 EGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGVGKCHYVHCDVTNEC---------------QV   78 (264)
Q Consensus        14 ~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~s~~~---------------~~   78 (264)
                      ..-+|+|.|+ +-.|.+-++.....|+.|.++..+.+.+ ++++....    .++..+..+..               ..
T Consensus        28 ~pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~-~~l~~l~~----~~i~~~~~~~~~~~~~~gyA~~~s~~~~  101 (183)
T d1l7da1          28 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATK-EQVESLGG----KFITVDDEAMKTAETAGGYAKEMGEEFR  101 (183)
T ss_dssp             CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTH-HHHHHTTC----EECCC-----------------------
T ss_pred             CCcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHH-HHHHHhhc----ceEEEeccccccccccccchhhcCHHHH
Confidence            3457888886 6788899999999999977777666544 44444322    22222221111               11


Q ss_pred             HHHHHHHHHhcCCccEEEEcCCCCCCC
Q 041914           79 KALVDSTVQNYGQLDIMFSNAGILSSS  105 (264)
Q Consensus        79 ~~~~~~~~~~~~~id~lv~~ag~~~~~  105 (264)
                      ...-+.+.+...+-|++|..+-+....
T Consensus       102 ~~~~~~l~~~l~~aDlVI~talipG~~  128 (183)
T d1l7da1         102 KKQAEAVLKELVKTDIAITTALIPGKP  128 (183)
T ss_dssp             CCHHHHHHHHHTTCSEEEECCCCTTSC
T ss_pred             HHHHHHHHHHHHhhhhheeeeecCCcc
Confidence            122233333345789999988765543

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=83.59  E-value=0.39  Score=34.75  Aligned_cols=41  Identities=20%  Similarity=0.295  Sum_probs=30.6

Q ss_pred             cEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHh
Q 041914           16 KVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVAT   58 (264)
Q Consensus        16 k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~   58 (264)
                      +++.|.|+ |..|.++|..|++.|.+|.+..|+++.. +.+.+
T Consensus         8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~-~~i~~   48 (189)
T d1n1ea2           8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEV-RLVNE   48 (189)
T ss_dssp             EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHH-HHHHH
T ss_pred             ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHH-HHHhh
Confidence            45778876 5699999999999999988877765443 44443

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=83.44  E-value=0.61  Score=32.79  Aligned_cols=31  Identities=16%  Similarity=0.040  Sum_probs=24.9

Q ss_pred             CcEEEEeCCCChhHHHHHHHHHHcCCcEEEEe
Q 041914           15 GKVAIITGGASGIGETTARLFADHGARMIVIA   46 (264)
Q Consensus        15 ~k~vlItGas~giG~~ia~~l~~~g~~v~~~~   46 (264)
                      +++|+|.|| |.+|..+|..|.+.|.++.++.
T Consensus         3 ~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           3 NDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             SCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence            567777775 8999999999999998865543

>d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=83.31  E-value=1  Score=33.83  Aligned_cols=36  Identities=25%  Similarity=0.505  Sum_probs=30.5

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecC
Q 041914           12 KLEGKVAIITGGASGIGETTARLFAD-HGARMIVIADI   48 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~   48 (264)
                      +|+||+++|-|- |.+|..+++.|.+ .|+.|+.+++.
T Consensus        29 ~l~g~~v~IqGf-GnVG~~~a~~L~~~~G~kvv~vsD~   65 (239)
T d1gtma1          29 TLKGKTIAIQGY-GNAGYYLAKIMSEDFGMKVVAVSDS   65 (239)
T ss_dssp             CSTTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred             CcCCCEEEEECC-CHHHHHHHHHHHHhcCcceeecccc
Confidence            489999999886 7799999999986 49998877764

>d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Maltose-6'-phosphate glucosidase GlvA
species: Bacillus subtilis [TaxId: 1423]

Probab=82.89  E-value=0.58  Score=33.08  Aligned_cols=55  Identities=9%  Similarity=0.067  Sum_probs=33.8

Q ss_pred             CccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhH----------------HHHHHHHHHHHHHHHHcCCCCcEEEEecC
Q 041914           91 QLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAIN----------------VRGMAACVKHAARVMVEGGVRGSIVCTAS  153 (264)
Q Consensus        91 ~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n----------------~~~~~~l~~~~l~~~~~~~~~~~iv~iss  153 (264)
                      +-|++|+.+|.....        ...-++.+..|                ..-....++.+.+.+++..+++.++++|.
T Consensus        77 ~AD~Vvitag~~~~~--------g~~rd~~i~~~~Gi~~~~t~g~gg~~~~~r~i~ii~~i~~~i~~~~P~A~li~~TN  147 (167)
T d1u8xx1          77 DVDFVMAHIRVGKYA--------MRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKYSPDAWMLNYSN  147 (167)
T ss_dssp             SCSEEEECCCTTHHH--------HHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred             CCCEEEECCCcCCCC--------ceeHHHhhchhcCceeeccccCcchheehhhHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence            789999999874321        12233333333                23345566777777777665677777763

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=82.78  E-value=0.89  Score=33.99  Aligned_cols=37  Identities=16%  Similarity=0.362  Sum_probs=31.0

Q ss_pred             ccCCCcEEEEeCCCChhHHHHHHHHHH-cCCcEEEEecC
Q 041914           11 NKLEGKVAIITGGASGIGETTARLFAD-HGARMIVIADI   48 (264)
Q Consensus        11 ~~l~~k~vlItGas~giG~~ia~~l~~-~g~~v~~~~~~   48 (264)
                      .+++|++++|-| .|.+|..+++.|.+ .|+.++.++..
T Consensus        27 ~~l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd~   64 (234)
T d1b26a1          27 IDPKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSDS   64 (234)
T ss_dssp             CCTTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred             CCcCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeecC
Confidence            468999998875 89999999999985 59998877653

>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Flavodoxin-like
superfamily: SGNH hydrolase
family: YxiM C-terminal domain-like
domain: Hypothetical protein YxiM
species: Bacillus subtilis [TaxId: 1423]

Probab=82.74  E-value=5.1  Score=28.26  Aligned_cols=57  Identities=9%  Similarity=0.143  Sum_probs=29.7

Q ss_pred             HHHHhcCCccEEEEcCCCCCCCCCCccCCCHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCCcEEEEecCCC
Q 041914           84 STVQNYGQLDIMFSNAGILSSSDQTVLDLDFSAFDRLFAINVRGMAACVKHAARVMVEGGVRGSIVCTASVA  155 (264)
Q Consensus        84 ~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~~~~iv~iss~~  155 (264)
                      ++.....+.|++|.+.|.....  .....+.+.+.+.           ++.++..+++.  ...++.++...
T Consensus        64 ~~~~~~~~~D~vvi~~G~ND~~--~~~~~~~~~~~~~-----------l~~li~~~~~~--~~~~vl~~~~~  120 (208)
T d2o14a2          64 AILKYIKPGDYFMLQLGINDTN--PKHKESEAEFKEV-----------MRDMIRQVKAK--GADVILSTPQG  120 (208)
T ss_dssp             HHHTTCCTTCEEEEECCTGGGC--GGGCCCHHHHHHH-----------HHHHHHHHHTT--TCEEEEECCCC
T ss_pred             HHHHhcCCCCEEEEEcCCCccc--ccccccHHHHHHH-----------HHHHHHHHHhc--CCceeeccccc
Confidence            3334445679999998876532  2233444444433           23334444443  34666665443

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=82.57  E-value=0.75  Score=34.84  Aligned_cols=31  Identities=16%  Similarity=0.478  Sum_probs=25.9

Q ss_pred             EEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           18 AIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        18 vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      |+|.|| |-.|..+|.+|+++|.+|+++.+..
T Consensus         6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            566665 7789999999999999999887653

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.56  E-value=0.7  Score=35.19  Aligned_cols=33  Identities=15%  Similarity=0.233  Sum_probs=28.2

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCch
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQD   50 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~   50 (264)
                      .|+|.||. ..|..+|..|+++|.+|+++-+.++
T Consensus         4 ~V~IvGaG-p~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAG-PSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCS-HHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcC-HHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            47888875 9999999999999999888877654

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=82.49  E-value=0.59  Score=35.31  Aligned_cols=32  Identities=16%  Similarity=0.292  Sum_probs=26.7

Q ss_pred             EEEEeCCCChhHHHHHHHHHHcCCcEEEEecCc
Q 041914           17 VAIITGGASGIGETTARLFADHGARMIVIADIQ   49 (264)
Q Consensus        17 ~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~   49 (264)
                      .|+|.|| |--|...|.+|+++|.+|+++-+.+
T Consensus         2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence            4788887 7789999999999999988876543

>d1qkia1 c.2.1.3 (A:12-199,A:435-449) Glucose 6-phosphate dehydrogenase, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose 6-phosphate dehydrogenase, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.22  E-value=4.8  Score=29.05  Aligned_cols=86  Identities=19%  Similarity=0.215  Sum_probs=53.2

Q ss_pred             CCcEEEEeCCCChhHH-----HHHHHHHH----cCCcEEEEecCchhhHH---HHHhhhCC------------CcEEEEE
Q 041914           14 EGKVAIITGGASGIGE-----TTARLFAD----HGARMIVIADIQDELGR---QVATSIGV------------GKCHYVH   69 (264)
Q Consensus        14 ~~k~vlItGas~giG~-----~ia~~l~~----~g~~v~~~~~~~~~~~~---~~~~~~~~------------~~~~~~~   69 (264)
                      ..-+++|.||||.+-+     ++-..+..    .+..++.++|++-...+   .+......            .++.++.
T Consensus        19 ~~~t~VIFGatGDLA~RKL~PALf~L~~~g~Lp~~~~Iig~aR~~~s~e~fr~~~~~~~~~~~~~~~~~~~f~~~~~Y~~   98 (203)
T d1qkia1          19 DTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVA   98 (203)
T ss_dssp             CCEEEEEETTTSHHHHHTHHHHHHHHHHTTCSCSSEEEEEEBSSCCSCHHHHHHHSCCTTCCGGGHHHHHHHHTTEECCB
T ss_pred             CCcEEEEECcccHHHHhHHHHHHHHHHHcCCCCCCcEEEEEECCCCCHHHHHHHHHHHHhhchhhHHHHHHHHHhhcccc
Confidence            4568999999999887     44433332    24567777776543211   11111100            4688999


Q ss_pred             ecCCCHHHHHHHHHHHHHhc-C-CccEEEEcC
Q 041914           70 CDVTNECQVKALVDSTVQNY-G-QLDIMFSNA   99 (264)
Q Consensus        70 ~D~s~~~~~~~~~~~~~~~~-~-~id~lv~~a   99 (264)
                      .|++++++..++-+.+.+.. + .-+.+++.|
T Consensus        99 ~d~~~~~~~~~L~~~l~~~~~~~~~~rifYLA  130 (203)
T d1qkia1          99 GQYDDAASYQRLNSHMNALHLGSQANRLFYLA  130 (203)
T ss_dssp             CCTTCHHHHHHHHHHHHHTTTTTTSEEEEEEC
T ss_pred             CcCCChhhHHHHHHHHHHHhcCCCcceEEEEe
Confidence            99999999999887776532 1 234566554

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=81.08  E-value=6.6  Score=27.12  Aligned_cols=59  Identities=8%  Similarity=0.031  Sum_probs=38.9

Q ss_pred             CCCcEEEEeCCCChhHHHHHHHHHHcCCcEEEEecCchhhHHHHHhhhCC---------------CcEEEEEecCCCH
Q 041914           13 LEGKVAIITGGASGIGETTARLFADHGARMIVIADIQDELGRQVATSIGV---------------GKCHYVHCDVTNE   75 (264)
Q Consensus        13 l~~k~vlItGas~giG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~D~s~~   75 (264)
                      ..|++||..|...|   ..+..|+++|++|+.+.-++... +...+....               ....++..|..+.
T Consensus        19 ~~~~rvLd~GCG~G---~~a~~la~~G~~V~gvD~S~~~i-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l   92 (201)
T d1pjza_          19 VPGARVLVPLCGKS---QDMSWLSGQGYHVVGAELSEAAV-ERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL   92 (201)
T ss_dssp             CTTCEEEETTTCCS---HHHHHHHHHCCEEEEEEECHHHH-HHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred             CCCCEEEEecCcCC---HHHHHHHHcCCceEeecccHHHH-HHHHHHhccccchhhhhhhhhccccccceeccccccc
Confidence            36889999998766   36679999999977776655444 333333221               2345677777664

>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium pasteurianum [TaxId: 1501]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Nitrogenase iron protein-like
domain: Nitrogenase iron protein
species: Clostridium pasteurianum [TaxId: 1501]

Probab=80.88  E-value=0.58  Score=35.47  Aligned_cols=32  Identities=22%  Similarity=0.349  Sum_probs=26.7

Q ss_pred             cEEEEeCCCChhHH-----HHHHHHHHcCCcEEEEecC
Q 041914           16 KVAIITGGASGIGE-----TTARLFADHGARMIVIADI   48 (264)
Q Consensus        16 k~vlItGas~giG~-----~ia~~l~~~g~~v~~~~~~   48 (264)
                      |++.|+| -||.|+     .++..|++.|.+|+++.-.
T Consensus         2 r~Iai~g-KGGvGKTT~a~nLA~~LA~~G~rVllID~D   38 (269)
T d1cp2a_           2 RQVAIYG-KGGIGKSTTTQNLTSGLHAMGKTIMVVGCD   38 (269)
T ss_dssp             EEEEEEE-CTTSSHHHHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CEEEEEC-CCcCCHHHHHHHHHHHHHhCCCcEEEEecC
Confidence            6788898 889998     6777999999998888654

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=80.77  E-value=2.4  Score=32.86  Aligned_cols=74  Identities=22%  Similarity=0.167  Sum_probs=45.8

Q ss_pred             cCCCcEEEEeCCCChhHHHHHHHHHHcCCc-EEEEecCchhhHHHHH--hhh-CCCcEEEEEecCCCHHHHHHHHHHHHH
Q 041914           12 KLEGKVAIITGGASGIGETTARLFADHGAR-MIVIADIQDELGRQVA--TSI-GVGKCHYVHCDVTNECQVKALVDSTVQ   87 (264)
Q Consensus        12 ~l~~k~vlItGas~giG~~ia~~l~~~g~~-v~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~D~s~~~~~~~~~~~~~~   87 (264)
                      .++||+||-.|+..|+   ++..+++.|+. |+.+... +......+  +.. -.+++.++..|+.+.+.          
T Consensus        31 ~~~~~~VLDiGcG~G~---ls~~aa~~Ga~~V~avd~s-~~~~~a~~~~~~n~~~~~v~~~~~~~~~~~~----------   96 (316)
T d1oria_          31 LFKDKVVLDVGSGTGI---LCMFAAKAGARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVEL----------   96 (316)
T ss_dssp             HHTTCEEEEETCTTSH---HHHHHHHTTCSEEEEEECS-TTHHHHHHHHHHTTCTTTEEEEESCTTTCCC----------
T ss_pred             cCCcCEEEEEecCCcH---HHHHHHHhCCCEEEEEcCc-HHHhhhhhHHHHhCCccccceEeccHHHccc----------
Confidence            3589999999987775   56677888876 5555533 33222211  111 12578999988876421          


Q ss_pred             hcCCccEEEEcC
Q 041914           88 NYGQLDIMFSNA   99 (264)
Q Consensus        88 ~~~~id~lv~~a   99 (264)
                      ...++|+++...
T Consensus        97 ~~~~~D~ivs~~  108 (316)
T d1oria_          97 PVEKVDIIISEW  108 (316)
T ss_dssp             SSSCEEEEEECC
T ss_pred             ccceeEEEeeee
Confidence            124789998754