Citrus Sinensis ID: 042026

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-----
Protein Sequence
MSQAVVSSSGPASNPSNVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQMSPPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNSTN
Secondary Structure (PSIPRED)
cccccccccccccccccccHHcccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEccccHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHcccccccccccccccccccccccccccccccccHHHHccccccccccHHHccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cccEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEcHHHHcccccEEEEEccccccHHHHHHHHHHccccccHHHHHcccccccccccEEEEEEEccccccccccccccccccccHHHccEcccccccEEEccccccEEEEEHHHHHHHHHcccccEEEccccccccccccHHHHHHHccccccccccccc
Coil and Loop (DISEMBL)
msqavvsssgpasnpsnvsSLLYSVSFLKQKVHQLQSVITILVsqdhhqptesTSIALANMRSLVQEIILTASSLMVTcqqmspppastsgtnnittneisqldpnnnqeissglqgcynfseafdtwygdhndfvttdddnnrgmhsnnvsnyinnanipvaengesfseingdiIEVDAVDLLAKYTHYCQVcgkgfkrdaNLRMHMRAhgdeyktsaaltnplkkngssmgktmSLQSKLwnkkhakfqplksmicvknhykrshcpkmyvckrcnrkqfsVLSDLRThekhcgdskwqcscgttfsrkdklMGHVALFvghtpavnvnstn
Flexible Loop (DISEMBL)
msqavvsssgpasnpsnVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQMSpppastsgtnNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGdeyktsaaltnplKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEkhcgdskwqcsCGTTFSRKDKLMGHVAlfvghtpavnvnstn
Low Complexity Region (SEG)
MSQAVVSSSGPASNPSNVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQMSPPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYGDHNDFVTTDDDNNRGMHsnnvsnyinnaniPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNSTN
Disordered region (IsUnstruct)
********************LLYSVSFLKQKVHQLQSVITILVSQD********SIALANMRSLVQEIILTASSLMVTC**********************************GLQGCYNFSEAFDTWYGDHNDFVTTD***********VSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRM***********************************LWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAV******
Disordered Region (DISOPRED)
***************SNVSSLLYSVSFLKQKVHQLQSV*******************LANMRSLVQEIILTASSLMVTC************************************************WYGDHNDFVTTDDD*************I*NANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKK*************KLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNSTN
Disordered Region (DISEMBL)
****************NVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTC***********GTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDL***********WQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNSTN
Disordered Region (DISPRO)
********SGPASNPSNVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQMSPP**********************************************************************************SFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNV****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MSQAVVSSSGPASNPSNVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQMSPPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNSTN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	335	2.2.26 [Sep-21-2011]
Q9C8N5	499	Protein SENSITIVE TO PROT	no	no	0.865	0.581	0.394	1e-62
Q943I6	522	Zinc finger protein STOP1	no	no	0.910	0.584	0.391	4e-62
Q2QX40	465	Zinc finger protein STAR3	no	no	0.883	0.636	0.356	1e-51
Q9FFH3	466	Zinc finger protein NUTCR	no	no	0.417	0.300	0.310	3e-19
Q700D2	503	Zinc finger protein JACKD	no	no	0.405	0.270	0.322	1e-18
Q9ZWA6	506	Zinc finger protein MAGPI	no	no	0.414	0.274	0.306	2e-18
Q8VWG3	303	Protein TRANSPARENT TESTA	no	no	0.507	0.561	0.338	3e-17
Q14588	700	Zinc finger protein 234 O	yes	no	0.379	0.181	0.306	1e-08
Q02386	682	Zinc finger protein 45 OS	no	no	0.373	0.183	0.328	3e-08
Q9UJU3	913	Zinc finger protein 112 O	no	no	0.379	0.139	0.292	5e-08

>sp|Q9C8N5|STOP1_ARATH Protein SENSITIVE TO PROTON RHIZOTOXICITY 1 OS=Arabidopsis thaliana GN=STOP1 PE=2 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/340 (39%), Positives = 194/340 (57%), Gaps = 50/340 (14%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIAL-------ANMRSLVQEIILTA 72
           ++L ++SF++QK+HQLQ ++ +LV +          +A         ++ S++ ++I TA
Sbjct: 80  TMLSNLSFMEQKIHQLQDLVHLLVGRGGQLQGRQDELAAQQQQLITTDLTSIIIQLISTA 139

Query: 73  SSLMVTCQQ-MSPPPASTSGTNNITT--------NEISQLDPNNNQEISSGLQGCYNFSE 123
            SL+ + +  MS  P   +G              N  SQ   NNN        G   F  
Sbjct: 140 GSLLPSVKHNMSTAPGPFTGQPGSAVFPYVREANNVASQSQNNNNC-------GAREF-- 190

Query: 124 AFDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVD 183
                  D    V  D+     +  + + +  +       E GE+    + +I++++  +
Sbjct: 191 -------DLPKPVLVDEREGHVVEEHEMKDEDD------VEEGENLPPGSYEILQLEKEE 237

Query: 184 LLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKL 243
           +LA +TH+C +CGKGFKRDANLRMHMR HGDEYKT+AAL  P   N  S+  +  +  K 
Sbjct: 238 ILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKP---NKESVPGSEPMLIKR 294

Query: 244 W---------NKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK 294
           +         NK+H KFQPLK+++CVKNHYKR+HC K + C RC+ K+FSV++DL+THEK
Sbjct: 295 YSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKFSVIADLKTHEK 354

Query: 295 HCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNST 334
           HCG +KW CSCGTTFSRKDKL GH+ALF GHTPA+ +  T
Sbjct: 355 HCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEET 394

Probable transcription factor. Plays a critical role in tolerance to major stress factors in acid soils such as proton H(+) and aluminum ion Al(3+). Required for the expression of genes in response to acidic stress (e.g. ALMT1 and MATE), and Al-activated citrate exudation.
Arabidopsis thaliana (taxid: 3702)

>sp|Q943I6|STOP1_ORYSJ Zinc finger protein STOP1 homolog OS=Oryza sativa subsp. japonica GN=Os01g0871200 PE=2 SV=1

 Score =  238 bits (608), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 133/340 (39%), Positives = 203/340 (59%), Gaps = 35/340 (10%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTS------IALANMRSLVQEIILTAS 73
           ++L ++SFL+QK+ Q++ ++  + +++      S+       +  A++  ++ ++I TA 
Sbjct: 97  AMLSNLSFLEQKIKQVKDIVQSMSNRESQVAGGSSEAQAKQQLVTADLTCIIIQLISTAG 156

Query: 74  SLMVTCQ-QMSPPPASTSGTNNITTNEI----SQLDPNNNQEIS-SGLQGCYNFSEAFDT 127
           SL+ + +  +S  PA    +N +    I      L P+ N E +   +   +++ E    
Sbjct: 157 SLLPSMKNPISSNPALRHLSNTLCAPMILGTNCNLRPSANDEATIPDISKTHDYEELM-- 214

Query: 128 WYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGD----------II 177
                N   TT  +++  M+  N      +  IP+ ++    S+  G+          ++
Sbjct: 215 -----NSLNTTQAESDEMMNCQNPCGGEGSEPIPMEDHDVKESDDGGERENLPPGSYVVL 269

Query: 178 EVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTM 237
           +++  ++LA +TH+C +CGKGFKRDANLRMHMR HGDEYKT+AAL  P  K+ S     +
Sbjct: 270 QLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKP-SKDSSLESAPV 328

Query: 238 SLQSKLW-----NKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTH 292
           +  S  +     NK+H KFQPLK+++CVKNHYKRSHC K Y C RCN K+FSV++DL+TH
Sbjct: 329 TRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTH 388

Query: 293 EKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVN 332
           EKHCG  KW CSCGTTFSRKDKL GHVALF GHTPA+ ++
Sbjct: 389 EKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPALPMD 428

Probable transcription factor that may be involved in aluminum tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q2QX40|ART1_ORYSJ Zinc finger protein STAR3 OS=Oryza sativa subsp. japonica GN=STAR3 PE=2 SV=1

 Score =  204 bits (518), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/331 (35%), Positives = 177/331 (53%), Gaps = 35/331 (10%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTEST---SIALANMRSLVQEIILTASSLM 76
           ++L +++F+++K+ Q++ VI  +  +     + +T    +  A++  L+ ++I TA SL+
Sbjct: 59  TMLDNLTFIEEKIRQVKDVIRSMAGRRASSSSAATPEQQLVNADLTCLIVQLISTAGSLL 118

Query: 77  VTCQQMSPPPASTSGTN---------NITTNEISQLDPNN--NQEISSGLQGCYNFSEAF 125
            + +  S    +T             ++   E S    NN  N+E      G  ++ E F
Sbjct: 119 PSLKNSSFLSRTTPPPAAAAGAAQAVSLAAGESSSSARNNETNREDEEEQMGSPDYDELF 178

Query: 126 DTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLL 185
             W                G   +       +          +  E   ++++++  ++L
Sbjct: 179 KVW--------------TNGGAMDECVGAAGDEQDARENPAAAAEEEKYEVLQLEEDEIL 224

Query: 186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSK--- 242
           A +TH+C +CGKGFKRDANLRMHMR HGDEYK++AAL  P              +     
Sbjct: 225 APHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYSCP 284

Query: 243 ----LWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGD 298
                 N+ HA FQPLK+++CVKNHYKRSHC K +VC RC  K+FSV++DL+THEKHCG 
Sbjct: 285 HAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHCGR 344

Query: 299 SKWQCSCGTTFSRKDKLMGHVALFVGHTPAV 329
            +W CSCGT+FSRKDKL  HVALF GH PA+
Sbjct: 345 DRWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375

Transcriptional activator that regulates the expression of genes involved in aluminum (Al) tolerance. Binds to the promoter of STAR1 and regulates transcript expression of STAR1 STAR2 and ART1 required for Al tolerance.

Oryza sativa subsp. japonica (taxid: 39947)

>sp|Q9FFH3|NUC_ARATH Zinc finger protein NUTCRACKER OS=Arabidopsis thaliana GN=NUC PE=2 SV=1

 Score = 95.9 bits (237), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 8/148 (5%)

Query: 174 GDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSM 233
            ++I +    L+A     C+VCGKGF+RD NL++H R H   +K     +  ++K     
Sbjct: 50  AEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVC 109

Query: 234 GKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHE 293
            +   +        H   + L  +  +K H+ R H  K + C++C  K+++V SD + H 
Sbjct: 110 PEKTCVH-------HHSSRALGDLTGIKKHFCRKHGEKKWTCEKC-AKRYAVQSDWKAHS 161

Query: 294 KHCGDSKWQCSCGTTFSRKDKLMGHVAL 321
           K CG  +++C CGT FSR+D  + H A 
Sbjct: 162 KTCGTREYRCDCGTIFSRRDSFITHRAF 189

Putative transcription factor.

Arabidopsis thaliana (taxid: 3702)

>sp|Q700D2|JKD_ARATH Zinc finger protein JACKDAW OS=Arabidopsis thaliana GN=JKD PE=1 SV=1

 Score = 94.4 bits (233), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 19/155 (12%)

Query: 173 NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSS 232
           + D+I +    L+A     C++C KGF+RD NL++H R H   +K        LK+    
Sbjct: 65  DADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWK--------LKQRS-- 114

Query: 233 MGKTMSLQSKLWN------KKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVL 286
             K   ++ K++         H   + L  +  +K HY R H  K + C++C++K ++V 
Sbjct: 115 --KQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKK-YAVQ 171

Query: 287 SDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVAL 321
           SD + H K CG  +++C CGT FSRKD  + H A 
Sbjct: 172 SDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAF 206

Probable transcription factor that regulates tissue boundaries and asymmetric cell division by a rapid up-regulation of 'SCARECROW' (SCR), thus controlling the nuclear localization of 'SHORT-ROOT' (SHR) and restricting its action. Required for radial patterning and stem cell maintenance. Counteracted by 'MAGPIE' (MGP).

Arabidopsis thaliana (taxid: 3702)

>sp|Q9ZWA6|MGP_ARATH Zinc finger protein MAGPIE OS=Arabidopsis thaliana GN=MGP PE=1 SV=1

 Score = 93.2 bits (230), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 8/147 (5%)

Query: 175 DIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMG 234
           ++I +    L+A     C++CGKGF+RD NL++H R H   +K     +  ++K      
Sbjct: 55  EVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCP 114

Query: 235 KTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK 294
           +   +        H   + L  +  +K H+ R H  K + C++C  K+++V SD + H K
Sbjct: 115 EKSCVH-------HHPTRALGDLTGIKKHFCRKHGEKKWKCEKC-AKRYAVQSDWKAHSK 166

Query: 295 HCGDSKWQCSCGTTFSRKDKLMGHVAL 321
            CG  +++C CGT FSR+D  + H A 
Sbjct: 167 TCGTREYRCDCGTIFSRRDSFITHRAF 193

Probable transcription factor that regulates tissue boundaries and asymmetric cell division. Might be involved in the sequestration of 'SHORT-ROOT' to the nucleus.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8VWG3|TT1_ARATH Protein TRANSPARENT TESTA 1 OS=Arabidopsis thaliana GN=TT1 PE=2 SV=1

 Score = 89.7 bits (221), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 7/177 (3%)

Query: 156 NNANIPVAENGESFS-EINGDIIEVDAVD-LLAKYTHY-CQVCGKGFKRDANLRMHMRAH 212
           N   I   + G+    E++G    + A + +L  +TH+ C VC K F R  NL+MHM  H
Sbjct: 108 NGKEIATYDAGKGIENELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGH 167

Query: 213 GDEY-KTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPK 271
           G +Y K   +L     +    +     ++    +  H + +PLK    ++ HYKR H  K
Sbjct: 168 GSQYRKGPESLKGTQPRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHK 227

Query: 272 MYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALF-VGHTP 327
            + C+ C  K  +V  D RTHEK+CG  +W C CG+ F  K  L  HV  F  GH P
Sbjct: 228 PFSCRLCG-KLLAVKGDWRTHEKNCG-KRWVCVCGSDFKHKRSLKDHVKAFGSGHGP 282

May act as a transcriptional regulator involved in the differentiation of young endothelium. Altered differentiation results in incompetence for pigments synthesis and the lack of condensed tannins in the seed coat.

Arabidopsis thaliana (taxid: 3702)

>sp|Q14588|ZN234_HUMAN Zinc finger protein 234 OS=Homo sapiens GN=ZNF234 PE=2 SV=3

 Score = 60.8 bits (146), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 20/147 (13%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKF 251
           C+VCGK F++ + L++H++AH        ++  P K      G   S + ++    H   
Sbjct: 430 CEVCGKAFRQSSYLKIHLKAH--------SVQKPFKCEECGQGFNQSSRLQIHQLIHTGE 481

Query: 252 QPLKSMICVKNHYKRS----HC-----PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW 301
           +P K   C K   +R+    HC      K Y C+ C  K FS  S L TH++ H G+  +
Sbjct: 482 KPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECG-KVFSQASHLLTHQRVHSGEKPF 540

Query: 302 QC-SCGTTFSRKDKLMGHVALFVGHTP 327
           +C  CG +FSR   L  H  +  G  P
Sbjct: 541 KCEECGKSFSRSAHLQAHQKVHTGEKP 567

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q02386|ZNF45_HUMAN Zinc finger protein 45 OS=Homo sapiens GN=ZNF45 PE=2 SV=2

 Score = 59.7 bits (143), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 63/149 (42%), Gaps = 24/149 (16%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLW--NKKHA 249
           C  CGKGF R ++  +H R H  E         P K      GK  S  S L    + H 
Sbjct: 418 CDACGKGFSRSSDFNIHFRVHTGE--------KPYK--CEECGKGFSQASNLLAHQRGHT 467

Query: 250 KFQPLKSMICVKNHYKRS----HC-----PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS 299
             +P K   C K   + S    HC      K Y C+RC  K FS  S L+ H++ H G+ 
Sbjct: 468 GEKPYKCGTCGKGFSRSSDLNVHCRIHTGEKPYKCERCG-KAFSQFSSLQVHQRVHTGEK 526

Query: 300 KWQCS-CGTTFSRKDKLMGHVALFVGHTP 327
            +QC+ CG  FS   +L  H     G  P
Sbjct: 527 PYQCAECGKGFSVGSQLQAHQRCHTGEKP 555

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score = 58.9 bits (141), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 20/147 (13%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKF 251
           C+VCGKGF + A L+ H R H            P K      G + S + +   + H   
Sbjct: 723 CEVCGKGFSQRAYLQGHQRVH--------TRVKPYKCEMCGKGFSQSSRLEAHRRVHTGG 774

Query: 252 QPLKSMICVKNH--------YKRSHCP-KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW 301
           +P K  +C K          ++R H   + Y C++C  K FS  S L+ H + H G+  +
Sbjct: 775 KPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCG-KGFSGYSSLQAHHRVHTGEKPY 833

Query: 302 QCS-CGTTFSRKDKLMGHVALFVGHTP 327
           +C  CG  FS++  L  H  +  G  P
Sbjct: 834 KCEVCGKGFSQRSNLQAHQRVHTGEKP 860

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
147772174	390	hypothetical protein VITISV_006074 [Viti	0.922	0.792	0.561	3e-94
225436444	423	PREDICTED: protein SENSITIVE TO PROTON R	0.922	0.730	0.561	3e-94
297734894	367	unnamed protein product [Vitis vinifera]	0.862	0.787	0.569	5e-94
255565483	416	hypothetical protein RCOM_0475290 [Ricin	0.877	0.706	0.549	4e-91
356547149	411	PREDICTED: protein SENSITIVE TO PROTON R	0.934	0.761	0.509	5e-88
356541958	410	PREDICTED: zinc finger protein STOP1 hom	0.925	0.756	0.507	2e-86
356541448	410	PREDICTED: uncharacterized protein LOC10	0.883	0.721	0.484	1e-81
356544678	396	PREDICTED: uncharacterized protein LOC10	0.838	0.709	0.528	1e-81
449443590	381	PREDICTED: protein SENSITIVE TO PROTON R	0.916	0.805	0.519	1e-79
449532625	381	PREDICTED: protein SENSITIVE TO PROTON R	0.916	0.805	0.519	1e-79

>gi|147772174|emb|CAN64546.1| hypothetical protein VITISV_006074 [Vitis vinifera]

 Score =  351 bits (901), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 187/333 (56%), Positives = 226/333 (67%), Gaps = 24/333 (7%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTC 79
           SL+YS S LK KVHQ+QS+I+I V  +  QP ES ++A+A M +L+QE+I  ASS+M +C
Sbjct: 44  SLVYSFSILKDKVHQVQSLISIFVPPNQGQP-ESMAMAVAGMGNLIQEVIAAASSMMYSC 102

Query: 80  QQMSPPPA-STSGTNNITTNEISQL-------DPNNNQEISSGLQGCYNFSEAFDTWYGD 131
           QQM    A   SGTN+    +  +L       D    Q      QG Y+  ++ D WYGD
Sbjct: 103 QQMGYGAAPGNSGTNHGLPQQGVELSDGRVCGDTGVVQMGEERGQGFYSSDQSLD-WYGD 161

Query: 132 HNDFVTTDDDNNRGMHSNN---VSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKY 188
           +++   T+D +   + SNN    S  +   +  + E          DI+E+DA DLLAKY
Sbjct: 162 NHNNSNTNDHSRTIIVSNNDKVESRELPQGSTQMNEGLGGVXPKTFDIVELDAEDLLAKY 221

Query: 189 THYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSL--------- 239
           THYCQ+CGKGFKRDANLRMHMRAHGDEYK++AAL+NP K  G  M     L         
Sbjct: 222 THYCQICGKGFKRDANLRMHMRAHGDEYKSNAALSNPTKNIGREMENKDDLIKLPRKYSC 281

Query: 240 --QSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCG 297
             +   WN+KHAKFQPLKSMICVKNHYKRSHCPKMY+CKRCN+KQFSVLSDLRTHEKHCG
Sbjct: 282 PQEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLSDLRTHEKHCG 341

Query: 298 DSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVN 330
           D KW CSCGTTFSRKDKLMGHVALFVGHTPA+N
Sbjct: 342 DLKWLCSCGTTFSRKDKLMGHVALFVGHTPAIN 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225436444|ref|XP_002272574.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Vitis vinifera]

 Score =  351 bits (900), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 187/333 (56%), Positives = 226/333 (67%), Gaps = 24/333 (7%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTC 79
           SL+YS S LK KVHQ+QS+I+I V  +  QP ES ++A+A M +L+QE+I  ASS+M +C
Sbjct: 44  SLVYSFSILKDKVHQVQSLISIFVPPNQGQP-ESMAMAVAGMGNLIQEVIAAASSMMYSC 102

Query: 80  QQMSPPPA-STSGTNNITTNEISQL-------DPNNNQEISSGLQGCYNFSEAFDTWYGD 131
           QQM    A   SGTN+    +  +L       D    Q      QG Y+  ++ D WYGD
Sbjct: 103 QQMGYGAAPGNSGTNHGLPQQGVELSDGRVCGDTGVVQMGEERGQGFYSSDQSLD-WYGD 161

Query: 132 HNDFVTTDDDNNRGMHSNN---VSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKY 188
           +++   T+D +   + SNN    S  +   +  + E          DI+E+DA DLLAKY
Sbjct: 162 NHNNSNTNDHSRTIIVSNNDKVESRELPQGSTQMNEGLGGVLPKTFDIVELDAEDLLAKY 221

Query: 189 THYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSL--------- 239
           THYCQ+CGKGFKRDANLRMHMRAHGDEYK++AAL+NP K  G  M     L         
Sbjct: 222 THYCQICGKGFKRDANLRMHMRAHGDEYKSNAALSNPTKNIGREMENKDDLIKLPRKYSC 281

Query: 240 --QSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCG 297
             +   WN+KHAKFQPLKSMICVKNHYKRSHCPKMY+CKRCN+KQFSVLSDLRTHEKHCG
Sbjct: 282 PQEGCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLSDLRTHEKHCG 341

Query: 298 DSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVN 330
           D KW CSCGTTFSRKDKLMGHVALFVGHTPA+N
Sbjct: 342 DLKWLCSCGTTFSRKDKLMGHVALFVGHTPAIN 374

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297734894|emb|CBI17128.3| unnamed protein product [Vitis vinifera]

 Score =  350 bits (898), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 188/330 (56%), Positives = 225/330 (68%), Gaps = 41/330 (12%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTC 79
           SL+YS S LK KVHQ+QS+I+I V  +  QP ES ++A+A M +L+QE+I  ASS+M +C
Sbjct: 44  SLVYSFSILKDKVHQVQSLISIFVPPNQGQP-ESMAMAVAGMGNLIQEVIAAASSMMYSC 102

Query: 80  QQMSPPPA-STSGTNNITTNEISQL-------DPNNNQEISSGLQGCYNFSEAFDTWYGD 131
           QQM    A   SGTN+    +  +L       D    Q      QG Y+  ++ D WYGD
Sbjct: 103 QQMGYGAAPGNSGTNHGLPQQGVELSDGRVCGDTGVVQMGEERGQGFYSSDQSLD-WYGD 161

Query: 132 HNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHY 191
           +++   T+D      HS           I V+ N ++F     DI+E+DA DLLAKYTHY
Sbjct: 162 NHNNSNTND------HSRT---------IIVSNNDKTF-----DIVELDAEDLLAKYTHY 201

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSL-----------Q 240
           CQ+CGKGFKRDANLRMHMRAHGDEYK++AAL+NP K  G  M     L           +
Sbjct: 202 CQICGKGFKRDANLRMHMRAHGDEYKSNAALSNPTKNIGREMENKDDLIKLPRKYSCPQE 261

Query: 241 SKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSK 300
              WN+KHAKFQPLKSMICVKNHYKRSHCPKMY+CKRCN+KQFSVLSDLRTHEKHCGD K
Sbjct: 262 GCRWNRKHAKFQPLKSMICVKNHYKRSHCPKMYICKRCNQKQFSVLSDLRTHEKHCGDLK 321

Query: 301 WQCSCGTTFSRKDKLMGHVALFVGHTPAVN 330
           W CSCGTTFSRKDKLMGHVALFVGHTPA+N
Sbjct: 322 WLCSCGTTFSRKDKLMGHVALFVGHTPAIN 351

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255565483|ref|XP_002523732.1| hypothetical protein RCOM_0475290 [Ricinus communis] gi|223537036|gb|EEF38672.1| hypothetical protein RCOM_0475290 [Ricinus communis]

 Score =  340 bits (873), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 200/364 (54%), Positives = 237/364 (65%), Gaps = 70/364 (19%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILVSQDHH------QPTESTSIALANMRSLVQEIILTAS 73
           SLLYS+S +K KV+Q+QS+++IL S DHH      Q  E  SIA  N+ +++QEII+TAS
Sbjct: 50  SLLYSLSVVKDKVNQVQSLVSILTSPDHHHQSYQQQNPEPNSIA--NLGTIIQEIIVTAS 107

Query: 74  SLMVTCQQMS-------------------PPPASTSGTNNITTNEISQLDPNNNQEISSG 114
           S+M TCQQM+                   P P   +   N+       L PN+ Q+   G
Sbjct: 108 SMMFTCQQMAIGSSNSINNNASELHQPAPPQPKVAAPQENV-------LLPNS-QDHQRG 159

Query: 115 LQGCYNFSEAFDTWYGDHNDFV-----TTDDDNNRGMHSNNVSNYINNANIPVAENGESF 169
               +  SE FD WY ++N        T ++    GMH N +S  IN   +   E  E+F
Sbjct: 160 QS--FFASENFD-WYDNNNYSNNSCNGTENNQTASGMH-NVIS--INTNKVERKELSENF 213

Query: 170 SEI----------NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTS 219
           S++          + DIIE+DA  LLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTS
Sbjct: 214 SDVLQEGNNKSIKSYDIIELDASYLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTS 273

Query: 220 AALTNPLKK-NGSSMGKT-----MSLQSKL--------WNKKHAKFQPLKSMICVKNHYK 265
           AAL+NP+K  N S++G +     M L  K         WN+KHAKFQPLKSMICVKNHYK
Sbjct: 274 AALSNPMKNINTSAIGDSSEDSVMKLPRKYSCPQEGCRWNQKHAKFQPLKSMICVKNHYK 333

Query: 266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGH 325
           RSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGD KW C CGTTFSRKDKLMGHVALFVGH
Sbjct: 334 RSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDLKWLCCCGTTFSRKDKLMGHVALFVGH 393

Query: 326 TPAV 329
           TPA+
Sbjct: 394 TPAI 397

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356547149|ref|XP_003541979.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Glycine max]

 Score =  330 bits (846), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 180/353 (50%), Positives = 236/353 (66%), Gaps = 40/353 (11%)

Query: 21  LLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQ 80
           LL+++S LK K+ ++Q+++ +++S +   P E TS+A+++M S++QEII+TA+S+M TCQ
Sbjct: 45  LLFNLSILKDKLSEVQTLVGVILSPNQSLP-EPTSMAISSMNSIIQEIIVTATSMMFTCQ 103

Query: 81  QMS--PPPASTS------------GTNNITTNEISQLDPNNNQEISSGLQGCYNF--SEA 124
           QM+   PP +T+              NN  TN    +  N   +  S  QG ++   SE 
Sbjct: 104 QMALTTPPGTTNKLHQQNKSLLPHSNNNSGTNTSVLIGNNIGSDNISDHQGLFSSTESET 163

Query: 125 FDTWYGDHNDFVTTDDDNNRGMHSNNVSNYIN------NANIPVAENGESFS---EINGD 175
            D W+   +     D+ N+      N+S+  N      + + P  E G       ++N D
Sbjct: 164 LD-WFSTESYNNNIDNSNSNISKVANISSENNIISRGRDEHEPNEEEGYYRGVSPKMNSD 222

Query: 176 IIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSM-G 234
           IIE+DA +LLAKYTHYCQVCGKGF+RDANLRMHMRAHGDEYKT+AAL+NP+K  G+ + G
Sbjct: 223 IIELDAANLLAKYTHYCQVCGKGFERDANLRMHMRAHGDEYKTNAALSNPIKNKGNLLEG 282

Query: 235 KTMSLQSKL------------WNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQ 282
               L S +            WN++H KFQPLKSMIC KNHYKRSHCPKMYVCKRCN+KQ
Sbjct: 283 GRECLMSTVKPKYSCPQEGCRWNQRHVKFQPLKSMICAKNHYKRSHCPKMYVCKRCNQKQ 342

Query: 283 FSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNSTN 335
           FSVLSDLRTHEKHCGD KWQC+CGT+FSRKDKLMGHVALFVGH PA  +N++N
Sbjct: 343 FSVLSDLRTHEKHCGDLKWQCTCGTSFSRKDKLMGHVALFVGHQPAAAINNSN 395

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541958|ref|XP_003539439.1| PREDICTED: zinc finger protein STOP1 homolog [Glycine max]

 Score =  325 bits (833), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 178/351 (50%), Positives = 232/351 (66%), Gaps = 41/351 (11%)

Query: 21  LLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQ 80
           LL+++S LK K+ ++Q+++ +++S +   P ESTS+A+++M S +QEI++TA+S+M TCQ
Sbjct: 43  LLFNLSILKDKLSEVQTLVGVILSPNQSLP-ESTSMAISSMNSTIQEIVVTATSMMFTCQ 101

Query: 81  QMS--PPPASTSGTN----------------NITTNEISQLDPNNNQEISSGLQGCYNFS 122
           QM+   PP + + TN                N  TN    L  N   +  S   G ++ +
Sbjct: 102 QMALTAPPGTNNNTNKLHHHQNKSLPHSSNINFATNGSCVLGNNIGTDNISDHHGLFSST 161

Query: 123 EA-----FDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSE-----I 172
           E+     F   Y +++D   ++  +   +  NN+          ++   E   E     +
Sbjct: 162 ESETLDWFSESYNNNDDNSNSNIISKVAISENNIITRGGGGGGVLSPRDEPNEEGLSPKM 221

Query: 173 NGD--IIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNG 230
           N D  IIE+DA +LLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKT+AAL+NP+K N 
Sbjct: 222 NSDDIIIELDAANLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTNAALSNPIK-NQ 280

Query: 231 SSMGKTMSLQSKL---------WNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRK 281
             +   MS++ K          WN++HAKFQPLKSMIC KNHYKRSHCPKMYVCKRCN+K
Sbjct: 281 RDLECLMSVKPKRYSCPQEGCRWNQRHAKFQPLKSMICAKNHYKRSHCPKMYVCKRCNQK 340

Query: 282 QFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVN 332
           QFSVLSDLRTHEKHCGD KW CSCGT+FSRKDKLMGHVALFVGH PA+N N
Sbjct: 341 QFSVLSDLRTHEKHCGDLKWLCSCGTSFSRKDKLMGHVALFVGHQPAINNN 391

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356541448|ref|XP_003539188.1| PREDICTED: uncharacterized protein LOC100802399 [Glycine max]

 Score =  309 bits (792), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 170/351 (48%), Positives = 214/351 (60%), Gaps = 55/351 (15%)

Query: 23  YSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQM 82
           + +S LK K+ QL +++ +LVS   + P EST  A++ + + +QEII+ A+S+  TCQQM
Sbjct: 53  FYLSLLKDKLGQLHNLVGVLVSPQQNLP-ESTPTAISTINNTIQEIIVAATSMRFTCQQM 111

Query: 83  SPPPASTSGTNNITTNEISQLD--------------PNNNQEISSGLQGCYNF------- 121
               +S SGTN I      Q+D               NNN+ + S +    +        
Sbjct: 112 I--SSSPSGTNTINELHQQQIDHGRLLPPSHHESNFINNNRGVPSNINIVSHINRGQSFL 169

Query: 122 -----SEAFDTWYGDHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDI 176
                 EA   W+ +  +   + ++       +  +N INN             E + DI
Sbjct: 170 SNSIEGEASLDWFAESYNNSNSGNNYFNP-KDDEAANIINNI----------MGETSDDI 218

Query: 177 IEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKT 236
           IE+DA DLLAKY+++CQVCGKGFKRDANLRMHMRAHG+EYKTSAAL NP+KKN       
Sbjct: 219 IELDAADLLAKYSYFCQVCGKGFKRDANLRMHMRAHGEEYKTSAALRNPMKKNNKKESNL 278

Query: 237 MSL--------------QSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQ 282
           + L              Q   WN++HAKFQPLKSMIC KNHYKRSHCPKMY+C RCN+KQ
Sbjct: 279 LFLGAEGSVTKRYSCPQQGCRWNQRHAKFQPLKSMICAKNHYKRSHCPKMYMCNRCNQKQ 338

Query: 283 FSVLSDLRTHEKHCGD-SKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVN 332
           FSVLSDLRTHEKHCGD  KWQCSCGTTFSRKDKLMGH+ LF GHTP  N+N
Sbjct: 339 FSVLSDLRTHEKHCGDYPKWQCSCGTTFSRKDKLMGHITLFAGHTPVPNIN 389

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544678|ref|XP_003540774.1| PREDICTED: uncharacterized protein LOC100803120 [Glycine max]

 Score =  309 bits (791), Expect = 1e-81,   Method: Compositional matrix adjust.
 Identities = 176/333 (52%), Positives = 215/333 (64%), Gaps = 52/333 (15%)

Query: 36  QSVITILVSQDHHQPTESTSIALANMRSLVQEIILTASSLMVTCQQMSPPPASTSGTNNI 95
           Q+++ +LVS   + P EST  A++ + + +QEII+ A+S+  TCQQM P  +S+SGTN  
Sbjct: 64  QNLVDVLVSPQQNLP-ESTPTAISTINNAIQEIIMAATSMRFTCQQMIP--SSSSGTN-- 118

Query: 96  TTNEISQ--------LDPN-------NNQEISSG---LQGCYNFSEAF---DTWYGDHND 134
           TTNE+ Q        L P+       NN+ ++S    +    N  ++F    +  G+  D
Sbjct: 119 TTNELQQKQIDHGRLLPPHHESNFVHNNRGVASNNINIVSDINRGQSFLLSSSIEGEALD 178

Query: 135 FVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEING---DIIEVDAVDLLAKYTHY 191
           +     +NNR     N  NY N  +    E     S I G   DIIE+DA DLLAKY+++
Sbjct: 179 WFAESYNNNR-----NSGNYCNPKD---DEAANIISNIMGEMSDIIELDAADLLAKYSYF 230

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKN-------------GSSMGKTMS 238
           CQVCGKGFKRDANLRMHMRAHG+EYKTS+AL NP+K N             GS   K  S
Sbjct: 231 CQVCGKGFKRDANLRMHMRAHGEEYKTSSALCNPMKNNKENSNLLLLGAEEGSGATKRYS 290

Query: 239 L--QSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHC 296
              Q   WN++HAKFQPLKSMIC KNHYKRSHCPKMYVC RCN+K FSV+SDLRTHEKHC
Sbjct: 291 CPQQGCRWNQRHAKFQPLKSMICAKNHYKRSHCPKMYVCNRCNQKHFSVISDLRTHEKHC 350

Query: 297 GDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAV 329
           GD KW CSCGTTFSRKDKLMGHVALFVGHTP  
Sbjct: 351 GDPKWLCSCGTTFSRKDKLMGHVALFVGHTPVT 383

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449443590|ref|XP_004139560.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cucumis sativus]

 Score =  303 bits (775), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 170/327 (51%), Positives = 207/327 (63%), Gaps = 20/327 (6%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILV--------SQDHHQPTESTS-IALANMRSLVQEIIL 70
           +LLY++S LK+K+HQ+QSV+ I V        S     P  S S +A A + SL+QE+I+
Sbjct: 40  TLLYNLSILKEKLHQIQSVVNIAVYNLQNSTESLPSAPPASSQSPVATAAVNSLIQELIM 99

Query: 71  TASSLMVTCQQMSPPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYG 130
            ASS++ TCQQM     + S  NN   N +      +  +    +      S        
Sbjct: 100 AASSMLFTCQQMDNLAVNASLHNNNVGNNLQGQHHQHQHQQQGPVDDNNGRSNTLFNMAN 159

Query: 131 DHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTH 190
           DH+     D  N    ++ N  N      +      +  + IN  I+E+DA DLLAKYTH
Sbjct: 160 DHH-HQRQDWYNTTTSNNYNKDNNNGRTIMTTKTTQDHRNPIN--IVELDASDLLAKYTH 216

Query: 191 YCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKK------NGSSMGKTMSLQSK-- 242
           YCQ+CGKGFKRDANLRMHMRAHGDEYK S AL+NP K       N S MG   S   +  
Sbjct: 217 YCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRKDLSNISKMGIKYSCPQEGC 276

Query: 243 LWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQ 302
            WN+KH KFQPLKS+ICVKNH+KR+HCPKMYVCK C+RK+FSVLSDLRTHEKHCGD KW 
Sbjct: 277 RWNQKHVKFQPLKSLICVKNHFKRTHCPKMYVCKLCSRKKFSVLSDLRTHEKHCGDVKWL 336

Query: 303 CSCGTTFSRKDKLMGHVALFVGHTPAV 329
           CSCGTTFSRKDKLMGHVALFVGHTPA+
Sbjct: 337 CSCGTTFSRKDKLMGHVALFVGHTPAM 363

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449532625|ref|XP_004173281.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Cucumis sativus]

 Score =  302 bits (774), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 170/327 (51%), Positives = 208/327 (63%), Gaps = 20/327 (6%)

Query: 20  SLLYSVSFLKQKVHQLQSVITILV--------SQDHHQPTESTS-IALANMRSLVQEIIL 70
           +LLY++S LK+K+HQ+QSV+ I V        S     P  S S +A A + SL+QE+I+
Sbjct: 40  TLLYNLSVLKEKLHQIQSVVNIAVYNLQNSTESLPSAPPASSQSPVATAAVNSLIQELIM 99

Query: 71  TASSLMVTCQQMSPPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTWYG 130
            ASS++ TCQQM     + S  NN   N +      +  +    +      S        
Sbjct: 100 AASSMLFTCQQMDNLAVNASLHNNNVGNNLQGQHHQHQHQQQGPVDDNNGRSNTLFNMAN 159

Query: 131 DHNDFVTTDDDNNRGMHSNNVSNYINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTH 190
           DH+     D  N    ++ N  N  +   +      +  + IN  I+E+DA DLLAKYTH
Sbjct: 160 DHH-HQRQDWYNTTTSNNYNKDNNNSRTIMTTKTTQDHRNPIN--IVELDASDLLAKYTH 216

Query: 191 YCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKK------NGSSMGKTMSLQSK-- 242
           YCQ+CGKGFKRDANLRMHMRAHGDEYK S AL+NP K       N S MG   S   +  
Sbjct: 217 YCQICGKGFKRDANLRMHMRAHGDEYKASGALSNPEKSHRKDLSNISKMGIKYSCPQEGC 276

Query: 243 LWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQ 302
            WN+KH KFQPLKS+ICVKNH+KR+HCPKMYVCK C+RK+FSVLSDLRTHEKHCGD KW 
Sbjct: 277 RWNQKHVKFQPLKSLICVKNHFKRTHCPKMYVCKLCSRKKFSVLSDLRTHEKHCGDVKWL 336

Query: 303 CSCGTTFSRKDKLMGHVALFVGHTPAV 329
           CSCGTTFSRKDKLMGHVALFVGHTPA+
Sbjct: 337 CSCGTTFSRKDKLMGHVALFVGHTPAM 363

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	335
TAIR|locus:2172701	373	AT5G22890 [Arabidopsis thalian	0.928	0.833	0.498	1.9e-76
TAIR|locus:2036303	499	STOP1 "AT1G34370" [Arabidopsis	0.507	0.340	0.589	6.9e-63
UNIPROTKB|Q943I6	522	LOC_Os01g65080 "Zinc finger pr	0.934	0.599	0.394	2e-56
UNIPROTKB|Q2QX40	465	STAR3 "Zinc finger protein STA	0.877	0.632	0.384	7.8e-55
TAIR|locus:2175123	450	AT5G60470 "AT5G60470" [Arabido	0.432	0.322	0.320	7.9e-21
TAIR|locus:2008386	303	TT1 "transparent testa 1" [Ara	0.465	0.514	0.351	1.7e-20
TAIR|locus:2008281	337	WIP5 "AT1G51220" [Arabidopsis	0.4	0.397	0.369	5.7e-20
TAIR|locus:2091931	412	WIP4 "AT3G20880" [Arabidopsis	0.4	0.325	0.358	4e-19
TAIR|locus:2205334	302	DOT5 "DEFECTIVELY ORGANIZED TR	0.397	0.440	0.364	6.5e-19
TAIR|locus:2078262	446	AT3G45260 "AT3G45260" [Arabido	0.420	0.316	0.317	1.1e-18

TAIR|locus:2172701 AT5G22890 [Arabidopsis thaliana (taxid:3702)]

 Score = 770 (276.1 bits), Expect = 1.9e-76, P = 1.9e-76
 Identities = 167/335 (49%), Positives = 218/335 (65%)

Query:     6 VSSSGPAS-NPSNVS-SLLYSVSFLKQKVHQLQSVITI-LVSQDH-HQPTESTSIALANM 61
             V+++G  S    +VS SLLY++S L +KVHQ+QS+++  +VS ++ +Q + STS+A+AN+
Sbjct:    39 VTTTGTKSMEDDDVSLSLLYNLSTLHEKVHQIQSLVSFYMVSTNNINQSSGSTSLAVANI 98

Query:    62 RSLVQEIILTASSLMVTCQQMSPPPASTSGTNNITTNEI--SQLDPNNNQEISSGLQGCY 119
              SLVQEII  ASS++ TCQQ+     S +  N+I  ++   + +   + QE   G    +
Sbjct:    99 GSLVQEIITAASSMLYTCQQLQI--GSNNNNNDIDNDQTVDAMVLEFSRQETDPG----H 152

Query:   120 NFSEAFDTWYGDHNDFVTTDDDNNRGMHXXXXXXXXXXXXXPVAENGESFSEINGDIIEV 179
             +F +     +G       +  D N   +                 +G S+     DI+E+
Sbjct:   153 DFVQESTNLFGVQERGQISFPDQNLDWYNTETINPKKDKHRSKPSSG-SY-----DILEL 206

Query:   180 DAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPL---KKNGSSMGK- 235
             D  DLLAKYTHYCQ+CGKGFKRDANLRMHMRAHGDEYKT  AL +P    KK G S+ K 
Sbjct:   207 DVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGYSLKKH 266

Query:   236 --TMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHE 293
               +       WN++H KFQPLKS+IC KNHYKRSHCPKMY+C+RC+ K FSVLSDLRTHE
Sbjct:   267 YYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHE 326

Query:   294 KHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPA 328
             KHCGD KW CSCGT FSRKDKLM HV+LF+GH PA
Sbjct:   327 KHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGHVPA 361

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0010200 "response to chitin" evidence=IEP

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2036303 STOP1 "AT1G34370" [Arabidopsis thaliana (taxid:3702)]

 Score = 575 (207.5 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
 Identities = 105/178 (58%), Positives = 136/178 (76%)

Query:   164 ENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALT 223
             E GE+    + +I++++  ++LA +TH+C +CGKGFKRDANLRMHMR HGDEYKT+AAL 
Sbjct:   218 EEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALA 277

Query:   224 NPLKKN--GSS--MGKTMS---LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCK 276
              P K++  GS   + K  S   L  K  NK+H KFQPLK+++CVKNHYKR+HC K + C 
Sbjct:   278 KPNKESVPGSEPMLIKRYSCPFLGCKR-NKEHKKFQPLKTILCVKNHYKRTHCDKSFTCS 336

Query:   277 RCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAVNVNST 334
             RC+ K+FSV++DL+THEKHCG +KW CSCGTTFSRKDKL GH+ALF GHTPA+ +  T
Sbjct:   337 RCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEET 394

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;ISS;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IMP;TAS

GO:0010044 "response to aluminum ion" evidence=IMP

GO:0010447 "response to acidity" evidence=IMP

UNIPROTKB|Q943I6 LOC_Os01g65080 "Zinc finger protein STOP1 homolog" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
 Identities = 133/337 (39%), Positives = 193/337 (57%)

Query:    11 PASNPSNVSSLLYSVSFLKQKVHQLQSVITILVSQDHHQPTESTSIALANMRSLVQEIIL 70
             P +  SN+S L   +  +K  V  + +  +  V+    +      +  A++  ++ ++I 
Sbjct:    95 PQAMLSNLSFLEQKIKQVKDIVQSMSNRES-QVAGGSSEAQAKQQLVTADLTCIIIQLIS 153

Query:    71 TASSLMVTCQQ-MSPPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCY-NFSEAFDTW 128
             TA SL+ + +  +S  PA    +N +    I  L  N N   S+  +    + S+  D  
Sbjct:   154 TAGSLLPSMKNPISSNPALRHLSNTLCAPMI--LGTNCNLRPSANDEATIPDISKTHD-- 209

Query:   129 YGD-HNDFVTTDDDNNRGMHXXXXXXXXXXXXXPVAENGESFSEINGD----------II 177
             Y +  N   TT  +++  M+             P+ ++    S+  G+          ++
Sbjct:   210 YEELMNSLNTTQAESDEMMNCQNPCGGEGSEPIPMEDHDVKESDDGGERENLPPGSYVVL 269

Query:   178 EVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTM 237
             +++  ++LA +TH+C +CGKGFKRDANLRMHMR HGDEYKT+AAL  P  K+ S     +
Sbjct:   270 QLEKEEILAPHTHFCLICGKGFKRDANLRMHMRGHGDEYKTAAALAKP-SKDSSLESAPV 328

Query:   238 SLQSKLW-----NKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTH 292
             +  S  +     NK+H KFQPLK+++CVKNHYKRSHC K Y C RCN K+FSV++DL+TH
Sbjct:   329 TRYSCPYVGCKRNKEHKKFQPLKTILCVKNHYKRSHCDKSYTCSRCNTKKFSVIADLKTH 388

Query:   293 EKHCGDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAV 329
             EKHCG  KW CSCGTTFSRKDKL GHVALF GHTPA+
Sbjct:   389 EKHCGRDKWLCSCGTTFSRKDKLFGHVALFQGHTPAL 425

GO:0005634 "nucleus" evidence=IC

UNIPROTKB|Q2QX40 STAR3 "Zinc finger protein STAR3" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 566 (204.3 bits), Expect = 7.8e-55, P = 7.8e-55
 Identities = 128/333 (38%), Positives = 186/333 (55%)

Query:    20 SLLYSVSFLKQKVHQLQSVITILVSQDHHQPTEST---SIALANMRSLVQEIILTASSLM 76
             ++L +++F+++K+ Q++ VI  +  +     + +T    +  A++  L+ ++I TA SL+
Sbjct:    59 TMLDNLTFIEEKIRQVKDVIRSMAGRRASSSSAATPEQQLVNADLTCLIVQLISTAGSLL 118

Query:    77 VTCQQMS------PPPASTSGTN---NITTNEISQLDPNN--NQEISSGLQGCYNFSEAF 125
              + +  S      PPPA+ +G     ++   E S    NN  N+E      G  ++ E F
Sbjct:   119 PSLKNSSFLSRTTPPPAAAAGAAQAVSLAAGESSSSARNNETNREDEEEQMGSPDYDELF 178

Query:   126 DTWY--GDHNDFVTTDDDNNRGMHXXXXXXXXXXXXXPVAENGESFSEINGDIIEVDAVD 183
               W   G  ++ V    D                   P A   E   E+    ++++  +
Sbjct:   179 KVWTNGGAMDECVGAAGDEQDAREN------------PAAAAEEEKYEV----LQLEEDE 222

Query:   184 LLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKK-NGSSMGKTMSLQSK 242
             +LA +TH+C +CGKGFKRDANLRMHMR HGDEYK++AAL  P     G         +  
Sbjct:   223 ILAPHTHFCGICGKGFKRDANLRMHMRGHGDEYKSAAALAKPPPPPEGEEQPPQPERRYS 282

Query:   243 L------WNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHC 296
                     N+ HA FQPLK+++CVKNHYKRSHC K +VC RC  K+FSV++DL+THEKHC
Sbjct:   283 CPHAGCKRNRMHASFQPLKTILCVKNHYKRSHCEKRHVCGRCGAKRFSVMADLKTHEKHC 342

Query:   297 GDSKWQCSCGTTFSRKDKLMGHVALFVGHTPAV 329
             G  +W CSCGT+FSRKDKL  HVALF GH PA+
Sbjct:   343 GRDRWLCSCGTSFSRKDKLFAHVALFQGHAPAL 375

GO:0005634 "nucleus" evidence=IDA

GO:0010044 "response to aluminum ion" evidence=IMP

GO:0043620 "regulation of DNA-dependent transcription in response to stress" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

TAIR|locus:2175123 AT5G60470 "AT5G60470" [Arabidopsis thaliana (taxid:3702)]

 Score = 250 (93.1 bits), Expect = 7.9e-21, P = 7.9e-21
 Identities = 50/156 (32%), Positives = 84/156 (53%)

Query:   167 ESFSEI----NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAAL 222
             E+F EI    N ++I +    L+A    +C++C KGF+R+ NL++H R H   +K     
Sbjct:    37 ETFQEIQAYPNAEVISLSPKSLMATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQ-- 94

Query:   223 TNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQ 282
                 K N + + K + +  +     H   + L  +  +K H+ R H  K + C +C++K 
Sbjct:    95 ----KTNKNQVKKKVYICPEKSCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKK- 149

Query:   283 FSVLSDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGH 318
             ++V+SD + H K CG  +++C CGT FSRKD  + H
Sbjct:   150 YAVISDWKAHNKICGSREFRCDCGTLFSRKDSFISH 185

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2008386 TT1 "transparent testa 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
 Identities = 57/162 (35%), Positives = 83/162 (51%)

Query:   170 SEINGDIIEVDAVD-LLAKYTHY-CQVCGKGFKRDANLRMHMRAHGDEY-KTSAALTNPL 226
             +E++G    + A + +L  +TH+ C VC K F R  NL+MHM  HG +Y K   +L    
Sbjct:   123 NELSGKAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQ 182

Query:   227 KKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVL 286
              +    +     ++    +  H + +PLK    ++ HYKR H  K + C+ C  K  +V 
Sbjct:   183 PRAMLGIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCG-KLLAVK 241

Query:   287 SDLRTHEKHCGDSKWQCSCGTTFSRKDKLMGHVALF-VGHTP 327
              D RTHEK+CG  +W C CG+ F  K  L  HV  F  GH P
Sbjct:   242 GDWRTHEKNCG-KRWVCVCGSDFKHKRSLKDHVKAFGSGHGP 282

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA;TAS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS;TAS

GO:0009813 "flavonoid biosynthetic process" evidence=IMP

TAIR|locus:2008281 WIP5 "AT1G51220" [Arabidopsis thaliana (taxid:3702)]

 Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
 Identities = 51/138 (36%), Positives = 66/138 (47%)

Query:   192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNK-KHAK 250
             C +C K F R  N++MHM  HG +Y+         +  G              N   H +
Sbjct:   180 CPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPCFCCAPGCKNNIDHPR 239

Query:   251 FQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTFS 310
              +PLK    ++ HYKR H  K + C+ C  K F+V  D RTHEK+CG   W CSCG+ F 
Sbjct:   240 AKPLKDFRTLQTHYKRKHGSKPFACRMCG-KAFAVKGDWRTHEKNCG-KLWYCSCGSDFK 297

Query:   311 RKDKLMGHVALFV-GHTP 327
              K  L  HV  F  GH P
Sbjct:   298 HKRSLKDHVKAFGNGHVP 315

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2091931 WIP4 "AT3G20880" [Arabidopsis thaliana (taxid:3702)]

 Score = 236 (88.1 bits), Expect = 4.0e-19, P = 4.0e-19
 Identities = 53/148 (35%), Positives = 72/148 (48%)

Query:   192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLW------N 245
             C +C K F R  N++MHM  HG +Y+       P    G+     + L           N
Sbjct:   258 CPLCFKTFNRYNNMQMHMWGHGSQYRKG-----PESLRGTQPTAMLKLPCYCCAPGCKNN 312

Query:   246 KKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSC 305
               H + +PLK    ++ HYKR H  + + C+RC  K F+V  D RTHEK+CG   W CSC
Sbjct:   313 IDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCG-KAFAVKGDWRTHEKNCG-KLWYCSC 370

Query:   306 GTTFSRKDKLMGHVALFV-GHTPAVNVN 332
             G+ F  K  L  HV  F  GH P   ++
Sbjct:   371 GSDFKHKRSLKDHVKAFGNGHVPCCGID 398

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2205334 DOT5 "DEFECTIVELY ORGANIZED TRIBUTARIES 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
 Identities = 50/137 (36%), Positives = 67/137 (48%)

Query:   192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTM--SLQSKLWNKKHA 249
             C VC K F R  N++MHM  HG +Y+         K + S +        +    N  H 
Sbjct:   103 CSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCAEGCKNNIDHP 162

Query:   250 KFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCSCGTTF 309
             + +PLK    ++ HYKR H  K + C++   K F+V  D RTHEK+CG   W C CG+ F
Sbjct:   163 RSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG-KLWFCVCGSDF 221

Query:   310 SRKDKLMGHVALFV-GH 325
               K  L  HV  F  GH
Sbjct:   222 KHKRSLKDHVRAFGDGH 238

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0010087 "phloem or xylem histogenesis" evidence=IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0010588 "cotyledon vascular tissue pattern formation" evidence=IMP

GO:0048364 "root development" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

TAIR|locus:2078262 AT3G45260 "AT3G45260" [Arabidopsis thaliana (taxid:3702)]

 Score = 235 (87.8 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 47/148 (31%), Positives = 77/148 (52%)

Query:   173 NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSS 232
             + ++I +    L+      C+VC KGFKRD NL++H R H   +K         + N   
Sbjct:    51 DAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ------RTNKEQ 104

Query:   233 MGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTH 292
             + K + +  +     H   + L  +  +K H+ R H  K + C +C++K ++V+SD + H
Sbjct:   105 VKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKK-YAVMSDWKAH 163

Query:   293 EKHCGDSKWQCSCGTTFSRKDKLMGHVA 320
              K CG  +++C CGT FSRKD  + H A
Sbjct:   164 SKICGTKEYRCDCGTLFSRKDSFITHRA 191

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=RCA;TAS

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009617 "response to bacterium" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0009965 "leaf morphogenesis" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030154 "cell differentiation" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0035304 "regulation of protein dephosphorylation" evidence=RCA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	335
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.93
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.9
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.86
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.77
KOG3608	467	consensus Zn finger proteins [General function pre	99.71
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	99.65
KOG3608	467	consensus Zn finger proteins [General function pre	99.6
KOG3576	267	consensus Ovo and related transcription factors [T	99.52
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.5
KOG3576	267	consensus Ovo and related transcription factors [T	99.33
PHA00733	128	hypothetical protein	99.0
PLN03086	567	PRLI-interacting factor K; Provisional	99.0
PHA02768	55	hypothetical protein; Provisional	98.9
PLN03086	567	PRLI-interacting factor K; Provisional	98.87
PHA02768	55	hypothetical protein; Provisional	98.68
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.6
PHA00616	44	hypothetical protein	98.56
PHA00733	128	hypothetical protein	98.53
PHA00616	44	hypothetical protein	98.33
KOG3993	500	consensus Transcription factor (contains Zn finger	98.27
PHA00732	79	hypothetical protein	98.22
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.22
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.97
KOG3993	500	consensus Transcription factor (contains Zn finger	97.89
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.87
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.85
PHA00732	79	hypothetical protein	97.81
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.75
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.66
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.57
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.39
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.39
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.37
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.11
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.01
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.87
smart00355	26	ZnF_C2H2 zinc finger.	96.67
PRK04860	160	hypothetical protein; Provisional	96.66
smart00355	26	ZnF_C2H2 zinc finger.	96.61
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.49
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.38
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.24
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	95.94
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.75
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.68
PRK04860	160	hypothetical protein; Provisional	95.26
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.11
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.08
KOG1146	1406	consensus Homeobox protein [General function predi	94.63
COG5048	467	FOG: Zn-finger [General function prediction only]	94.4
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.7
COG5048	467	FOG: Zn-finger [General function prediction only]	92.85
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.6
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.36
KOG1146	1406	consensus Homeobox protein [General function predi	90.77
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	90.76
KOG2482	423	consensus Predicted C2H2-type Zn-finger protein [T	90.12
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	89.71
KOG2893	341	consensus Zn finger protein [General function pred	89.43
KOG2893	341	consensus Zn finger protein [General function pred	88.71
COG5236	493	Uncharacterized conserved protein, contains RING Z	86.75
KOG2231	669	consensus Predicted E3 ubiquitin ligase [Posttrans	85.28
PHA00626	59	hypothetical protein	83.22
COG4049	65	Uncharacterized protein containing archaeal-type C	82.8
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	81.97
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	80.47
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	80.4

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.93  E-value=2.6e-26  Score=197.50  Aligned_cols=135  Identities=29%  Similarity=0.479  Sum_probs=111.5

Q ss_pred             CCCCCCCCCCCCcCCCcchhHHHHHHhhcC-CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcC
Q 042026          156 NNANIPVAENGESFSEINGDIIEVDAVDLL-AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMG  234 (335)
Q Consensus       156 ~~~~~~c~~c~~~~~~~~~~~~h~~~~~~~-~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~  234 (335)
                      ....+.|.+|++.+.+.+.|.+|...+... .++.+.|++|||.|.+-..|+||+|+|+  .+..|          ..||
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C----------~iCG  194 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCEC----------GICG  194 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCccc----------cccc
Confidence            344588999999999999999998887643 4567899999999999999999999997  34444          4568


Q ss_pred             chhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCH
Q 042026          235 KTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRK  312 (335)
Q Consensus       235 ~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~  312 (335)
                      |.|+..+.+                 +.|+|+|+|||||.|..|+ |+|...++|+.||. |.+.|+|.|. |+|+|+++
T Consensus       195 KaFSRPWLL-----------------QGHiRTHTGEKPF~C~hC~-kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~  256 (279)
T KOG2462|consen  195 KAFSRPWLL-----------------QGHIRTHTGEKPFSCPHCG-KAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALK  256 (279)
T ss_pred             ccccchHHh-----------------hcccccccCCCCccCCccc-chhcchHHHHHHHHhhcCCccccCcchhhHHHHH
Confidence            888743333                 3455555556888999999 99999999999999 9999999999 99999999


Q ss_pred             HHHHHHHh
Q 042026          313 DKLMGHVA  320 (335)
Q Consensus       313 ~~L~~H~~  320 (335)
                      +.|.+|..
T Consensus       257 SyLnKH~E  264 (279)
T KOG2462|consen  257 SYLNKHSE  264 (279)
T ss_pred             HHHHHhhh
Confidence            99999965

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.90  E-value=1.4e-24  Score=186.87  Aligned_cols=118  Identities=23%  Similarity=0.377  Sum_probs=99.5

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCcccccce
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ....|+|..|||.|.+.++|.+|..+|..-..       ...+.|..|+|.|.  -.|..|+|+|+              
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s-------~ka~~C~~C~K~YvSmpALkMHirTH~--------------  185 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDS-------KKAFSCKYCGKVYVSMPALKMHIRTHT--------------  185 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccc-------cccccCCCCCceeeehHHHhhHhhccC--------------
Confidence            45569999999999999999999999865421       22223356677776  34555666665              


Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                             -+++|.+|| |.|+..|.|+.|+| |||||||.|+ |+|.|..+++|+.||++|.+.|+|+|-.
T Consensus       186 -------l~c~C~iCG-KaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~  248 (279)
T KOG2462|consen  186 -------LPCECGICG-KAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPR  248 (279)
T ss_pred             -------CCccccccc-ccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcc
Confidence                   578999999 99999999999999 9999999999 9999999999999999999999999953

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.86  E-value=2.5e-22  Score=194.10  Aligned_cols=57  Identities=30%  Similarity=0.590  Sum_probs=53.6

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                      ...|..|| +.|+..++|..|+| |+|+|||.|. |++.|..+.+|+.||.+|....|+.
T Consensus       879 ~h~C~vCg-k~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  879 AHVCNVCG-KQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPS  937 (958)
T ss_pred             hhhhccch-hcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCc
Confidence            47899999 99999999999999 9999999999 9999999999999999998776653

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.77  E-value=1e-19  Score=173.53  Aligned_cols=59  Identities=36%  Similarity=0.706  Sum_probs=57.8

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|.|..|+ |+|...+.|.+|.- |+|.|||+|. |.|.|+.+.+|..|+|+|.|||||.|-
T Consensus       894 myaCDqCD-K~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCd  954 (1007)
T KOG3623|consen  894 MYACDQCD-KAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCD  954 (1007)
T ss_pred             cchHHHHH-HHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhh
Confidence            89999999 99999999999999 9999999999 999999999999999999999999984

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.71  E-value=8.7e-18  Score=148.60  Aligned_cols=155  Identities=21%  Similarity=0.358  Sum_probs=128.7

Q ss_pred             CCCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCc
Q 042026          156 NNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGK  235 (335)
Q Consensus       156 ~~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~  235 (335)
                      .+....|+.|+.-|.+...+..|+.........+|.|..|.|+|.++..|++|++.|..-  |+|++|        ..+-
T Consensus       204 ~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~--ykCplC--------dmtc  273 (467)
T KOG3608|consen  204 NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNC--YKCPLC--------DMTC  273 (467)
T ss_pred             CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhc--cccccc--------ccCC
Confidence            344577999999999999999999888888888999999999999999999999999754  677776        3333


Q ss_pred             hhhhhhHHHHH-HhcCCCCCCCccccc---------ceeeeeeCCcceeccc--CCCccCCCHHHHHHHHh--ccCCC--
Q 042026          236 TMSLQSKLWNK-KHAKFQPLKSMICVK---------NHYKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK--HCGDS--  299 (335)
Q Consensus       236 ~f~~~l~~h~~-~h~~~~p~~C~~C~k---------~h~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~--H~g~~--  299 (335)
                      ...+.|..|++ .|...|||+|+.|++         +|...|. +-.|.|..  |. ..|.+...+++|++  |.|..  
T Consensus       274 ~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~-~s~r~~~q~~~H~~evhEg~np~  351 (467)
T KOG3608|consen  274 SSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCH-YSVRTYTQMRRHFLEVHEGNNPI  351 (467)
T ss_pred             CChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCc-HHHHHHHHHHHHHHHhccCCCCC
Confidence            44578888987 688999999999987         4667666 67899988  99 99999999999998  65654  


Q ss_pred             Ceeec-cCccccCHHHHHHHHh-hh
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVA-LF  322 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~-~H  322 (335)
                      +|.|- |.+.|.+--+|..|++ .|
T Consensus       352 ~Y~CH~Cdr~ft~G~~L~~HL~kkH  376 (467)
T KOG3608|consen  352 LYACHCCDRFFTSGKSLSAHLMKKH  376 (467)
T ss_pred             ceeeecchhhhccchhHHHHHHHhh
Confidence            49999 9999999999999954 44

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=99.65  E-value=4.1e-17  Score=158.35  Aligned_cols=58  Identities=21%  Similarity=0.419  Sum_probs=52.2

Q ss_pred             CCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcC
Q 042026          159 NIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKT  218 (335)
Q Consensus       159 ~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~  218 (335)
                      ..+|..|.+.|...+.|++|++.++  +++||+|.+||.+|.++.+|+.|...|...+|.
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHT--GERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~  410 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHT--GERPFQCNVCGNRFSTKGNLKVHFQRHREKYPH  410 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccC--CCCCeeecccccccccccceeeeeeeccccCCc
Confidence            3779999999999999999999887  899999999999999999999999888888754

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=99.60  E-value=6.1e-16  Score=136.98  Aligned_cols=150  Identities=19%  Similarity=0.278  Sum_probs=92.2

Q ss_pred             CCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHh--cCCCcCcccccCCCccCCCCcCchhhh--h
Q 042026          165 NGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAH--GDEYKTSAALTNPLKKNGSSMGKTMSL--Q  240 (335)
Q Consensus       165 c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H--~~~~~~~c~lc~~~~~~~~~c~~~f~~--~  240 (335)
                      |-+.+.++..|+.|++.+.  +++...|+.||.-|.++..|-.|.|.-  ....+|+|+          .|.|.|..  .
T Consensus       185 Ct~~~~~k~~LreH~r~Hs--~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~----------~C~KrFaTekl  252 (467)
T KOG3608|consen  185 CTKHMGNKYRLREHIRTHS--NEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCA----------QCFKRFATEKL  252 (467)
T ss_pred             hhhhhccHHHHHHHHHhcC--CCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHH----------HHHHHHhHHHH
Confidence            4444555555555544443  444455555555555555555554332  222344443          34666663  3


Q ss_pred             hHHHHHHhcCCCCCCCccccc---------ceee-eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec---cC
Q 042026          241 SKLWNKKHAKFQPLKSMICVK---------NHYK-RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS---CG  306 (335)
Q Consensus       241 l~~h~~~h~~~~p~~C~~C~k---------~h~~-~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~---C~  306 (335)
                      |.-|+..|.  .-|+|+.|+.         +|++ +|..+|||+|..|. +.|...++|.+|.. |. +..|+|.   |.
T Consensus       253 L~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd-~~c~~esdL~kH~~~HS-~~~y~C~h~~C~  328 (467)
T KOG3608|consen  253 LKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECD-TRCVRESDLAKHVQVHS-KTVYQCEHPDCH  328 (467)
T ss_pred             HHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchh-hhhccHHHHHHHHHhcc-ccceecCCCCCc
Confidence            455776665  4578888865         4554 45557888888888 88888888888888 77 5668885   88


Q ss_pred             ccccCHHHHHHHHhhhc-CCC--Cccc
Q 042026          307 TTFSRKDKLMGHVALFV-GHT--PAVN  330 (335)
Q Consensus       307 ~~F~~~~~L~~H~~~H~-gek--p~~c  330 (335)
                      .+|+....|++|++.++ |..  +|.|
T Consensus       329 ~s~r~~~q~~~H~~evhEg~np~~Y~C  355 (467)
T KOG3608|consen  329 YSVRTYTQMRRHFLEVHEGNNPILYAC  355 (467)
T ss_pred             HHHHHHHHHHHHHHHhccCCCCCceee
Confidence            88888888888876444 544  5555

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.52  E-value=3.3e-15  Score=122.97  Aligned_cols=108  Identities=28%  Similarity=0.527  Sum_probs=74.2

Q ss_pred             CcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCccccccee
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      ...|.|.+|+|.|.-...|.+||+.|...+.+.|..|          |+.|.  ..|.+|.|+|+|.             
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~c----------gkgfndtfdlkrh~rthtgv-------------  171 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFC----------GKGFNDTFDLKRHTRTHTGV-------------  171 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhc----------cCcccchhhhhhhhccccCc-------------
Confidence            3457777777777777777777777777777766544          66665  3455555555554             


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh--cc----------CCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HC----------GDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~----------g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                            +||+|..|+ |+|.+.-.|..|.+  |.          ..+.|.|. ||.+-.+...+..|++.|+.
T Consensus       172 ------rpykc~~c~-kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  172 ------RPYKCSLCE-KAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             ------cccchhhhh-HHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence                  566667777 77777777777776  53          24557787 88777777777777777753

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.50  E-value=4.3e-15  Score=142.28  Aligned_cols=80  Identities=28%  Similarity=0.601  Sum_probs=73.4

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .....|.|+.|+|.|...++|.+|.-.|+|.                                                 
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGq-------------------------------------------------  920 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQ-------------------------------------------------  920 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCC-------------------------------------------------
Confidence            3567899999999999999999999888888                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHh
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~  320 (335)
                            |||+|.+|. |+|..+.+|..|+| |.|+|||+|+ |+|+|+.......||-
T Consensus       921 ------RPyqC~iCk-KAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHMN  971 (1007)
T KOG3623|consen  921 ------RPYQCIICK-KAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHMN  971 (1007)
T ss_pred             ------CCcccchhh-HhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhhc
Confidence                  788888898 99999999999999 9999999999 9999999999999974

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=99.33  E-value=1.6e-12  Score=107.18  Aligned_cols=119  Identities=21%  Similarity=0.293  Sum_probs=93.0

Q ss_pred             CCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCch
Q 042026          157 NANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKT  236 (335)
Q Consensus       157 ~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~  236 (335)
                      ...+.|..|++.|.-..-|.+|++-+.  .-+.|-|..|||+|.....|++|+|+|+|.+||+|.+|          ++.
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~--~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c----------~ka  182 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHS--DVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLC----------EKA  182 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhcc--HHHHHHHhhccCcccchhhhhhhhccccCccccchhhh----------hHH
Confidence            445899999999999889999998887  44558999999999999999999999999999999765          888


Q ss_pred             hhh--hhHHHHH-HhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          237 MSL--QSKLWNK-KHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       237 f~~--~l~~h~~-~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      |..  .|..|.+ +|.-...|.         ......|.|.|+.|| ..-.....+..|.+ |..
T Consensus       183 ftqrcsleshl~kvhgv~~~ya---------ykerr~kl~vcedcg-~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  183 FTQRCSLESHLKKVHGVQHQYA---------YKERRAKLYVCEDCG-YTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             HHhhccHHHHHHHHcCchHHHH---------HHHhhhheeeecccC-CCCCChhHHHHHHHhcCC
Confidence            874  4555654 333221111         011224899999999 88889999999999 643

>PHA00733 hypothetical protein

Probab=99.00  E-value=4.1e-10  Score=89.39  Aligned_cols=84  Identities=21%  Similarity=0.284  Sum_probs=68.4

Q ss_pred             CCcceecccccccccCcHHHHHH--HHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccce
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMH--MRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H--~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ..+++.|.+|.+.|.....|..|  ++.|.                                                  
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~--------------------------------------------------   66 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLL--------------------------------------------------   66 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhc--------------------------------------------------
Confidence            35678999999999887777766  33221                                                  


Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                        .+++.+||.|+.|| +.|...+.|..|++ |  +.+|.|. |++.|...+.|..|++..++
T Consensus        67 --~~~~~kPy~C~~Cg-k~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         67 --TSKAVSPYVCPLCL-MPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             --ccCCCCCccCCCCC-CcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence              11224899999999 99999999999999 8  4679999 99999999999999987765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.00  E-value=1.3e-09  Score=105.50  Aligned_cols=135  Identities=16%  Similarity=0.324  Sum_probs=88.4

Q ss_pred             CCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceeccc--ccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCc
Q 042026          158 ANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGK  235 (335)
Q Consensus       158 ~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~  235 (335)
                      ....|+.|..... ...+..|...-   ....-.|+.  ||..|. +..|..|.         .|          ..|++
T Consensus       406 ~~V~C~NC~~~i~-l~~l~lHe~~C---~r~~V~Cp~~~Cg~v~~-r~el~~H~---------~C----------~~Cgk  461 (567)
T PLN03086        406 DTVECRNCKHYIP-SRSIALHEAYC---SRHNVVCPHDGCGIVLR-VEEAKNHV---------HC----------EKCGQ  461 (567)
T ss_pred             CeEECCCCCCccc-hhHHHHHHhhC---CCcceeCCcccccceee-ccccccCc---------cC----------CCCCC
Confidence            3456888876544 34455555322   112235663  777663 33333332         33          34566


Q ss_pred             hhh-hhhHHHHHHhcCCCCCCCccccc--------ceeeeeeCCcceecccCCCccCC----------CHHHHHHHHhcc
Q 042026          236 TMS-LQSKLWNKKHAKFQPLKSMICVK--------NHYKRSHCPKMYVCKRCNRKQFS----------VLSDLRTHEKHC  296 (335)
Q Consensus       236 ~f~-~~l~~h~~~h~~~~p~~C~~C~k--------~h~~~h~~~k~y~C~~C~~k~F~----------~~~~L~~H~~H~  296 (335)
                      .|. ..+..|+++|+  +|+.|+ |++        .|+..|...|++.|..|+ +.|.          ..+.|..|+..+
T Consensus       462 ~f~~s~LekH~~~~H--kpv~Cp-Cg~~~~R~~L~~H~~thCp~Kpi~C~fC~-~~v~~g~~~~d~~d~~s~Lt~HE~~C  537 (567)
T PLN03086        462 AFQQGEMEKHMKVFH--EPLQCP-CGVVLEKEQMVQHQASTCPLRLITCRFCG-DMVQAGGSAMDVRDRLRGMSEHESIC  537 (567)
T ss_pred             ccchHHHHHHHHhcC--CCccCC-CCCCcchhHHHhhhhccCCCCceeCCCCC-CccccCccccchhhhhhhHHHHHHhc
Confidence            665 55677777764  778887 866        366667778899999999 8884          245899998856


Q ss_pred             CCCCeeec-cCccccCHHHHHHHHhh
Q 042026          297 GDSKWQCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       297 g~~~~~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      |.+++.|. ||+.|+.+. |..|+..
T Consensus       538 G~rt~~C~~Cgk~Vrlrd-m~~H~~~  562 (567)
T PLN03086        538 GSRTAPCDSCGRSVMLKE-MDIHQIA  562 (567)
T ss_pred             CCcceEccccCCeeeehh-HHHHHHH
Confidence            99999999 999988775 6677543

>PHA02768 hypothetical protein; Provisional

Probab=98.90  E-value=4.2e-10  Score=74.03  Aligned_cols=42  Identities=21%  Similarity=0.415  Sum_probs=38.8

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHH
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLM  316 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~  316 (335)
                      -|.|+.|| |.|+..++|..|++ |+  ++|+|. |++.|.+.+.|.
T Consensus         5 ~y~C~~CG-K~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICG-EIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhC-CeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            48999999 99999999999999 98  799999 999999888764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.87  E-value=2.6e-09  Score=103.43  Aligned_cols=119  Identities=17%  Similarity=0.297  Sum_probs=86.6

Q ss_pred             ceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccc-------
Q 042026          189 THYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVK-------  261 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k-------  261 (335)
                      ...|+.|.+... ..+|..|.....- ..        ..|+...|+..|..        ..-.+++.|+.|++       
T Consensus       407 ~V~C~NC~~~i~-l~~l~lHe~~C~r-~~--------V~Cp~~~Cg~v~~r--------~el~~H~~C~~Cgk~f~~s~L  468 (567)
T PLN03086        407 TVECRNCKHYIP-SRSIALHEAYCSR-HN--------VVCPHDGCGIVLRV--------EEAKNHVHCEKCGQAFQQGEM  468 (567)
T ss_pred             eEECCCCCCccc-hhHHHHHHhhCCC-cc--------eeCCcccccceeec--------cccccCccCCCCCCccchHHH
Confidence            357999987655 4466677633211 11        11221258888852        22335579999987       


Q ss_pred             -ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCcccc----------CHHHHHHHHhhhcCCCCc
Q 042026          262 -NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFS----------RKDKLMGHVALFVGHTPA  328 (335)
Q Consensus       262 -~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~----------~~~~L~~H~~~H~gekp~  328 (335)
                       .|++.+|  ++|.|+ || +.| ....|..|+. |++.+++.|. |++.|.          ..+.|..|..++ |.+++
T Consensus       469 ekH~~~~H--kpv~Cp-Cg-~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~  542 (567)
T PLN03086        469 EKHMKVFH--EPLQCP-CG-VVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTA  542 (567)
T ss_pred             HHHHHhcC--CCccCC-CC-CCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcce
Confidence             4666765  899999 99 766 6789999999 9999999999 999995          246899999996 99999


Q ss_pred             ccC
Q 042026          329 VNV  331 (335)
Q Consensus       329 ~c~  331 (335)
                      .|.
T Consensus       543 ~C~  545 (567)
T PLN03086        543 PCD  545 (567)
T ss_pred             Ecc
Confidence            994

>PHA02768 hypothetical protein; Provisional

Probab=98.68  E-value=7.4e-09  Score=68.19  Aligned_cols=24  Identities=25%  Similarity=0.688  Sum_probs=23.0

Q ss_pred             eecccccccccCcHHHHHHHHHhc
Q 042026          190 HYCQVCGKGFKRDANLRMHMRAHG  213 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~H~  213 (335)
                      |.|+.||+.|.+..+|..|||+|+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~   29 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN   29 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC
Confidence            899999999999999999999987

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.60  E-value=2.6e-08  Score=56.02  Aligned_cols=24  Identities=42%  Similarity=1.088  Sum_probs=21.8

Q ss_pred             HHHHHHh-ccCCCCeeec-cCccccC
Q 042026          288 DLRTHEK-HCGDSKWQCS-CGTTFSR  311 (335)
Q Consensus       288 ~L~~H~~-H~g~~~~~C~-C~~~F~~  311 (335)
                      +|++|++ |+|++||.|+ |+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            5889999 9999999999 9999974

...

>PHA00616 hypothetical protein

Probab=98.56  E-value=3e-08  Score=62.12  Aligned_cols=31  Identities=23%  Similarity=0.511  Sum_probs=17.1

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      ||+|+ ||+.|.+++.|.+|++.|+|++|+.|
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            45555 55555555555555555555555544

>PHA00733 hypothetical protein

Probab=98.53  E-value=5.1e-08  Score=77.42  Aligned_cols=78  Identities=19%  Similarity=0.184  Sum_probs=61.3

Q ss_pred             CCCCCCCCCcCCCcchhHHH--HHH-hhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCc
Q 042026          159 NIPVAENGESFSEINGDIIE--VDA-VDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGK  235 (335)
Q Consensus       159 ~~~c~~c~~~~~~~~~~~~h--~~~-~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~  235 (335)
                      .+.|..|.+.|.....+..+  +.. ....+.++|.|+.||+.|.....|..|++.|  .                    
T Consensus        40 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~--------------------   97 (128)
T PHA00733         40 RLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--E--------------------   97 (128)
T ss_pred             hHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--C--------------------
Confidence            37788888888776666555  211 1223577899999999999999999999865  2                    


Q ss_pred             hhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh
Q 042026          236 TMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       236 ~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                                                         ++|.|..|+ +.|.....|..|+.
T Consensus        98 -----------------------------------~~~~C~~Cg-K~F~~~~sL~~H~~  120 (128)
T PHA00733         98 -----------------------------------HSKVCPVCG-KEFRNTDSTLDHVC  120 (128)
T ss_pred             -----------------------------------cCccCCCCC-CccCCHHHHHHHHH
Confidence                                               457889999 99999999999998

>PHA00616 hypothetical protein

Probab=98.33  E-value=2e-07  Score=58.44  Aligned_cols=32  Identities=25%  Similarity=0.401  Sum_probs=30.8

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      ||+|..|| +.|...+.|.+|++ |+|++++.|+
T Consensus         1 pYqC~~CG-~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCG-GIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhh-HHHhhHHHHHHHHHHhcCCCcccee
Confidence            69999999 99999999999999 9999999987

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=98.27  E-value=2.3e-07  Score=85.02  Aligned_cols=53  Identities=32%  Similarity=0.668  Sum_probs=41.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-cc--------C-------------------------CCCeeec-cCccccCHHHH
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HC--------G-------------------------DSKWQCS-CGTTFSRKDKL  315 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~--------g-------------------------~~~~~C~-C~~~F~~~~~L  315 (335)
                      -.|+|++|+ |.|+-..+|..|.| |.        |                         +.-|.|. |+|.|.+...|
T Consensus       294 vEYrCPEC~-KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYL  372 (500)
T KOG3993|consen  294 VEYRCPECD-KVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYL  372 (500)
T ss_pred             eeecCCccc-ccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHH
Confidence            357778888 88888888888877 64        1                         1139999 99999999999


Q ss_pred             HHHHhhhcC
Q 042026          316 MGHVALFVG  324 (335)
Q Consensus       316 ~~H~~~H~g  324 (335)
                      ++|+.+|+.
T Consensus       373 rKHqlthq~  381 (500)
T KOG3993|consen  373 RKHQLTHQR  381 (500)
T ss_pred             HHhHHhhhc
Confidence            999988863

>PHA00732 hypothetical protein

Probab=98.22  E-value=8.2e-07  Score=64.08  Aligned_cols=45  Identities=24%  Similarity=0.528  Sum_probs=38.9

Q ss_pred             ceecccCCCccCCCHHHHHHHHh--ccCCCCeeec-cCccccCHHHHHHHHhhhc
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK--HCGDSKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      ||.|..|| +.|.....|+.|++  |.   ++.|+ ||++|.   .|..|++++.
T Consensus         1 py~C~~Cg-k~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCPICG-FTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCCCCC-CccCCHHHHHHHhhcccC---CCccCCCCCEeC---ChhhhhcccC
Confidence            68999999 99999999999997  54   46899 999998   5888987654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.22  E-value=1.1e-06  Score=49.41  Aligned_cols=13  Identities=54%  Similarity=1.037  Sum_probs=7.8

Q ss_pred             cceecccCCCccCC
Q 042026          271 KMYVCKRCNRKQFS  284 (335)
Q Consensus       271 k~y~C~~C~~k~F~  284 (335)
                      |||.|+.|+ +.|.
T Consensus        13 k~~~C~~C~-k~F~   25 (26)
T PF13465_consen   13 KPYKCPYCG-KSFS   25 (26)
T ss_dssp             SSEEESSSS-EEES
T ss_pred             CCCCCCCCc-CeeC
Confidence            556666666 6654

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.97  E-value=9.8e-06  Score=54.21  Aligned_cols=49  Identities=27%  Similarity=0.546  Sum_probs=40.0

Q ss_pred             ceecccCCCccCCCHHHHHHHHh--ccCC-CCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK--HCGD-SKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~--H~g~-~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      .|.|++|+ +.| ....|..|..  |..+ +.+.|+ |...+.  ..|.+|+..+++
T Consensus         2 ~f~CP~C~-~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCG-KGF-SESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCC-Ccc-CHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            48999999 855 5678999987  8876 569999 998755  499999988764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=97.89  E-value=1.5e-06  Score=79.69  Aligned_cols=113  Identities=19%  Similarity=0.252  Sum_probs=71.4

Q ss_pred             CCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh
Q 042026          159 NIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS  238 (335)
Q Consensus       159 ~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~  238 (335)
                      +|.|..|...|.+...|..|.-....  ...|+|+.|+|.|.-.+||..|.|+|.-...-.-.-..+.       .+...
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV--~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~-------k~~~~  337 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIV--HVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPP-------KQAVE  337 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeE--EeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCCh-------hhhhh
Confidence            38899999999999999888754432  2349999999999999999999999965421100000000       00000


Q ss_pred             hhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          239 LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       239 ~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      ...........|..               ..+-.|.|.+|+ |.|.....|++|+. |.
T Consensus       338 ~rae~~ea~rsg~d---------------ss~gi~~C~~C~-KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  338 TRAEVQEAERSGDD---------------SSSGIFSCHTCG-KKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hhhhhhhccccCCc---------------ccCceeecHHhh-hhhHHHHHHHHhHHhhh
Confidence            00000000001110               123489999999 99999999999987 54

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.87  E-value=9.6e-06  Score=44.03  Aligned_cols=23  Identities=48%  Similarity=1.006  Sum_probs=21.6

Q ss_pred             eecccccccccCcHHHHHHHHHh
Q 042026          190 HYCQVCGKGFKRDANLRMHMRAH  212 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~H  212 (335)
                      |.|++|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999876

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.85  E-value=1.3e-05  Score=43.45  Aligned_cols=22  Identities=36%  Similarity=0.863  Sum_probs=14.5

Q ss_pred             eeec-cCccccCHHHHHHHHhhh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      |.|+ |++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            5666 666666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PHA00732 hypothetical protein

Probab=97.81  E-value=1.2e-05  Score=58.08  Aligned_cols=23  Identities=26%  Similarity=0.431  Sum_probs=21.0

Q ss_pred             ceecccccccccCcHHHHHHHHH
Q 042026          189 THYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      +|.|..||+.|.+..+|+.|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~   23 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARR   23 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhc
Confidence            47899999999999999999984

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.75  E-value=4.6e-05  Score=50.94  Aligned_cols=51  Identities=12%  Similarity=0.154  Sum_probs=41.2

Q ss_pred             CCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhc
Q 042026          160 IPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHG  213 (335)
Q Consensus       160 ~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~  213 (335)
                      |.|+.|++ .-+...|..|....+....+.+.|++|...+.  .+|.+|++.++
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            78999999 45567899999888877777899999988655  48999987654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.66  E-value=1e-05  Score=71.66  Aligned_cols=50  Identities=28%  Similarity=0.571  Sum_probs=43.9

Q ss_pred             Ccceeccc--CCCccCCCHHHHHHHHh--cc------------------CCCCeeec-cCccccCHHHHHHHHh
Q 042026          270 PKMYVCKR--CNRKQFSVLSDLRTHEK--HC------------------GDSKWQCS-CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       270 ~k~y~C~~--C~~k~F~~~~~L~~H~~--H~------------------g~~~~~C~-C~~~F~~~~~L~~H~~  320 (335)
                      +|||+|++  |+ |.|.....|+.|+.  |.                  ..|||+|+ |+|+|++.-.|+-|+.
T Consensus       347 ~KpykCpV~gC~-K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCN-KKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCch-hhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48999976  99 99999999999998  73                  24899999 9999999999998853

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.57  E-value=2.8e-05  Score=68.96  Aligned_cols=71  Identities=30%  Similarity=0.532  Sum_probs=48.9

Q ss_pred             Ccceeccc--ccccccCcHHHHHHHHH-hcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccce
Q 042026          187 KYTHYCQV--CGKGFKRDANLRMHMRA-HGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       187 ~~~~~C~~--C~k~f~~~~~L~~H~r~-H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      +++|+|++  |.|.|+....|+.||.- |...+...-+                              .|       ..|
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p------------------------------~p-------~~~  389 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENP------------------------------SP-------EKM  389 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCC------------------------------Cc-------ccc
Confidence            58999987  99999999999999753 3333211100                              00       011


Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHhc
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKH  295 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~H  295 (335)
                      .......|||+|++|+ |+|.....|+.|..|
T Consensus       390 ~~F~~~~KPYrCevC~-KRYKNlNGLKYHr~H  420 (423)
T COG5189         390 NIFSAKDKPYRCEVCD-KRYKNLNGLKYHRKH  420 (423)
T ss_pred             ccccccCCceeccccc-hhhccCccceecccc
Confidence            1112234999999999 999999999999874

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.39  E-value=0.00014  Score=39.46  Aligned_cols=22  Identities=36%  Similarity=0.853  Sum_probs=12.2

Q ss_pred             eeec-cCccccCHHHHHHHHhhh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      |.|+ |++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            4566 666666666666666554

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.39  E-value=0.00013  Score=39.63  Aligned_cols=24  Identities=46%  Similarity=1.029  Sum_probs=20.1

Q ss_pred             eecccccccccCcHHHHHHHHHhc
Q 042026          190 HYCQVCGKGFKRDANLRMHMRAHG  213 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~H~  213 (335)
                      |.|++|++.|.+...|+.|+++|.
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            689999999999999999998863

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.37  E-value=0.00015  Score=40.93  Aligned_cols=23  Identities=35%  Similarity=0.687  Sum_probs=13.3

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhh
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      ||.|. |++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            35555 666666666666665555

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.11  E-value=0.00036  Score=39.28  Aligned_cols=24  Identities=50%  Similarity=1.088  Sum_probs=22.5

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-cc
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      +|.|..|+ +.|.....|..|++ |.
T Consensus         1 ~~~C~~C~-~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECG-KTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTT-EEESSHHHHHHHHCTTT
T ss_pred             CCCCCccC-CccCChhHHHHHhHHhc
Confidence            68999999 99999999999999 75

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.01  E-value=0.00049  Score=51.85  Aligned_cols=48  Identities=31%  Similarity=0.629  Sum_probs=20.6

Q ss_pred             ecccCCCccCCCHHHHHHHHh--ccC----------------------CCCeeec-cCccccCHHHHHHHHhhh
Q 042026          274 VCKRCNRKQFSVLSDLRTHEK--HCG----------------------DSKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       274 ~C~~C~~k~F~~~~~L~~H~~--H~g----------------------~~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      .|..|+ ..|.....|..|+.  |.-                      ...|.|. |++.|.....|..||+.+
T Consensus         1 ~C~~C~-~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCD-ESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccc-cccccccccccccccccccccccccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            477788 78888888888876  531                      1258999 999999999999999975

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.87  E-value=0.00088  Score=43.07  Aligned_cols=38  Identities=18%  Similarity=0.378  Sum_probs=22.0

Q ss_pred             HHHHh--ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          290 RTHEK--HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       290 ~~H~~--H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      ..+.+  +..+.|-.|+ |+..+++..+|++|+.++++.||
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34444  4456778888 88888888888888888887776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.67  E-value=0.0014  Score=35.90  Aligned_cols=22  Identities=32%  Similarity=0.807  Sum_probs=12.1

Q ss_pred             eeec-cCccccCHHHHHHHHhhh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      |.|. |++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            3455 555555555555555544

>PRK04860 hypothetical protein; Provisional

Probab=96.66  E-value=0.00079  Score=55.47  Aligned_cols=38  Identities=32%  Similarity=0.714  Sum_probs=32.8

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHH
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKD  313 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~  313 (335)
                      -+|.|. |+ +   ....+++|.+ |+|+++|.|. |+..|....
T Consensus       118 ~~Y~C~-C~-~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQ-E---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CC-C---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            479998 99 6   6677899999 9999999999 999987543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.61  E-value=0.0015  Score=35.87  Aligned_cols=24  Identities=46%  Similarity=0.836  Sum_probs=21.4

Q ss_pred             eecccccccccCcHHHHHHHHHhc
Q 042026          190 HYCQVCGKGFKRDANLRMHMRAHG  213 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~H~  213 (335)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999998775

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.49  E-value=0.0018  Score=48.66  Aligned_cols=23  Identities=30%  Similarity=0.668  Sum_probs=20.7

Q ss_pred             cceecccCCCccCCCHHHHHHHHh
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      ..+.|..|+ +.|.....|..|++
T Consensus        49 ~~~~C~~C~-~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   49 ESFRCPYCN-KTFRSREALQEHMR   71 (100)
T ss_dssp             SSEEBSSSS--EESSHHHHHHHHH
T ss_pred             CCCCCCccC-CCCcCHHHHHHHHc
Confidence            469999999 99999999999999

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.38  E-value=0.0036  Score=40.28  Aligned_cols=33  Identities=21%  Similarity=0.432  Sum_probs=23.2

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCc
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYK  217 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~  217 (335)
                      ....|..|++|+..+.+..+|++|+..+++.+|
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            456789999999999999999999988776543

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.24  E-value=0.0023  Score=35.16  Aligned_cols=23  Identities=39%  Similarity=1.039  Sum_probs=21.0

Q ss_pred             eecccccccccCcHHHHHHHHHh
Q 042026          190 HYCQVCGKGFKRDANLRMHMRAH  212 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~H  212 (335)
                      |.|.+|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            68999999999999999999764

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=95.94  E-value=0.022  Score=56.78  Aligned_cols=130  Identities=21%  Similarity=0.272  Sum_probs=69.4

Q ss_pred             ecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh-hhhHHHHHHhc-CCC----CCCCccccc---
Q 042026          191 YCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS-LQSKLWNKKHA-KFQ----PLKSMICVK---  261 (335)
Q Consensus       191 ~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~-~~l~~h~~~h~-~~~----p~~C~~C~k---  261 (335)
                      .|..| -.|.....|+.||+.-+  ..+.|.+|-.....+-.+.+.|. ..+.+|+..-- +++    .-.|..|..   
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H--~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fl  193 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQH--KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFL  193 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhh--hhhccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhc
Confidence            35555 55668889999995432  33567676544444445566666 56777765311 111    123555533   


Q ss_pred             ------ceeeeeeCCcceecccC------CCccCCCHHHHHHHHhccCCCCeeec---cC-cccc----CHHHHHHHHhh
Q 042026          262 ------NHYKRSHCPKMYVCKRC------NRKQFSVLSDLRTHEKHCGDSKWQCS---CG-TTFS----RKDKLMGHVAL  321 (335)
Q Consensus       262 ------~h~~~h~~~k~y~C~~C------~~k~F~~~~~L~~H~~H~g~~~~~C~---C~-~~F~----~~~~L~~H~~~  321 (335)
                            +|++.+|    |.|..|      + .-|....+|..|-|   +.-|.|.   |. +.|.    ....|+.|.+.
T Consensus       194 d~~el~rH~~~~h----~~chfC~~~~~~n-eyy~~~~dLe~HfR---~~HflCE~~~C~~~~f~~~~~~ei~lk~~~~~  265 (669)
T KOG2231|consen  194 DDDELYRHLRFDH----EFCHFCDYKTGQN-EYYNDYDDLEEHFR---KGHFLCEEEFCRTKKFYVAFELEIELKAHNRF  265 (669)
T ss_pred             cHHHHHHhhccce----eheeecCcccccc-hhcccchHHHHHhh---hcCccccccccccceeeehhHHHHHHHhhccc
Confidence                  4544433    334444      4 45667777888877   1115664   43 2333    33455555444


Q ss_pred             hcCCCCcccC
Q 042026          322 FVGHTPAVNV  331 (335)
Q Consensus       322 H~gekp~~c~  331 (335)
                      +.-|+-|.|.
T Consensus       266 ~~~e~~~~~~  275 (669)
T KOG2231|consen  266 IQHEKCYICR  275 (669)
T ss_pred             cchheeccCC
Confidence            4445555554

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.75  E-value=0.0085  Score=32.54  Aligned_cols=22  Identities=27%  Similarity=0.579  Sum_probs=12.5

Q ss_pred             eeec-cCccccCHHHHHHHHhhhc
Q 042026          301 WQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      |+|+ |+.... +..|.+|+++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            5666 666655 666666666654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.68  E-value=0.0097  Score=32.60  Aligned_cols=21  Identities=29%  Similarity=0.735  Sum_probs=12.6

Q ss_pred             eeec-cCccccCHHHHHHHHhh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      |.|. |++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566 66666666666666554

>PRK04860 hypothetical protein; Provisional

Probab=95.26  E-value=0.015  Score=47.91  Aligned_cols=29  Identities=21%  Similarity=0.407  Sum_probs=19.0

Q ss_pred             cceecccccccccCcHHHHHHHHHhcCCCcCcc
Q 042026          188 YTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSA  220 (335)
Q Consensus       188 ~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c  220 (335)
                      .+|.|. |++   ...++++|.++|.++++|.|
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC  146 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRC  146 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEEC
Confidence            457776 776   56677777777777744433

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.11  E-value=0.016  Score=31.46  Aligned_cols=23  Identities=26%  Similarity=0.566  Sum_probs=18.1

Q ss_pred             eecccccccccCcHHHHHHHHHhc
Q 042026          190 HYCQVCGKGFKRDANLRMHMRAHG  213 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~H~  213 (335)
                      |+|+.|+.... +..|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            68999998887 889999998864

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.08  E-value=0.0039  Score=35.07  Aligned_cols=22  Identities=36%  Similarity=0.921  Sum_probs=20.0

Q ss_pred             eecccccccccCcHHHHHHHHH
Q 042026          190 HYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999864

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=94.63  E-value=0.034  Score=58.77  Aligned_cols=127  Identities=18%  Similarity=0.266  Sum_probs=78.7

Q ss_pred             CCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhh
Q 042026          162 VAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQS  241 (335)
Q Consensus       162 c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l  241 (335)
                      +..|+..+.....+..|+...+. ..+.|+|+.|+..|+....|-.|||.-+-+...  .+|...               
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S-~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~g---------------  500 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHS-FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKAG---------------  500 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeec-ccccccCCccchhhhhHHHhhhcccccccccch--hHhHhc---------------
Confidence            33444444444444444333332 337899999999999999999999983333111  222111               


Q ss_pred             HHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh---ccC---------------------
Q 042026          242 KLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK---HCG---------------------  297 (335)
Q Consensus       242 ~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~---H~g---------------------  297 (335)
                      ..|.+.-.| ..|.|+.            ++|.|..|. ..|+....|..|+.   |..                     
T Consensus       501 q~~~~~arg-~~~~~~~------------~p~~C~~C~-~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~  566 (1406)
T KOG1146|consen  501 QNHPRLARG-EVYRCPG------------KPYPCRACN-YSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVT  566 (1406)
T ss_pred             ccccccccc-ccccCCC------------Ccccceeee-eeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhc
Confidence            111111100 1233333            899999999 99999999999987   531                     


Q ss_pred             --------------------CCCeeec-cCccccCHHHHHHHHh
Q 042026          298 --------------------DSKWQCS-CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       298 --------------------~~~~~C~-C~~~F~~~~~L~~H~~  320 (335)
                                          .-.|.|. |+..-.-...|+-||.
T Consensus       567 s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmt  610 (1406)
T KOG1146|consen  567 SAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMT  610 (1406)
T ss_pred             ccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccc
Confidence                                1139999 9988777778888875

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.40  E-value=0.006  Score=58.17  Aligned_cols=59  Identities=22%  Similarity=0.301  Sum_probs=28.9

Q ss_pred             CCCCCCCCcCCCcchhHHHHHH-hhcCCC--cceecc--cccccccCcHHHHHHHHHhcCCCcCc
Q 042026          160 IPVAENGESFSEINGDIIEVDA-VDLLAK--YTHYCQ--VCGKGFKRDANLRMHMRAHGDEYKTS  219 (335)
Q Consensus       160 ~~c~~c~~~~~~~~~~~~h~~~-~~~~~~--~~~~C~--~C~k~f~~~~~L~~H~r~H~~~~~~~  219 (335)
                      +.|..|...|.....+..|... .+ ..+  +++.|+  .|++.|.+...+..|...|.+..+..
T Consensus       290 ~~~~~~~~~~s~~~~l~~~~~~~~h-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (467)
T COG5048         290 IKSKQCNISFSRSSPLTRHLRSVNH-SGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAK  353 (467)
T ss_pred             CCCccccCCcccccccccccccccc-ccccCCceeeeccCCCccccccccccCCcccccCCCccc
Confidence            4455555555555555555542 11 123  455555  45555555555555555555554333

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.70  E-value=0.029  Score=31.42  Aligned_cols=21  Identities=38%  Similarity=0.820  Sum_probs=15.6

Q ss_pred             eecccCCCccCCCHHHHHHHHh
Q 042026          273 YVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       273 y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      |.|..|+ +.|.....|..|++
T Consensus         2 ~~C~~C~-k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACD-KYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTT-BBBSSHHHHHCCTT
T ss_pred             CCcccCC-CCcCCHHHHHHHHc
Confidence            5677777 77777777777765

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=92.85  E-value=0.045  Score=52.06  Aligned_cols=135  Identities=24%  Similarity=0.324  Sum_probs=95.8

Q ss_pred             cceecccccccccCcHHHHHHHH--HhcCC--CcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCccccc
Q 042026          188 YTHYCQVCGKGFKRDANLRMHMR--AHGDE--YKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVK  261 (335)
Q Consensus       188 ~~~~C~~C~k~f~~~~~L~~H~r--~H~~~--~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k  261 (335)
                      .++.|..|...|.....|..|.+  .|.++  +++.|.+-        .|++.|.  ..+..|..+|++..++++..-..
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  359 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYS--------LCGKLFSRNDALKRHILLHTSISPAKEKLLNS  359 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeecc--------CCCccccccccccCCcccccCCCccccccccC
Confidence            46899999999999999999999  89999  88888632        4678887  45677888999988877755422


Q ss_pred             --ce--------------eeeeeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCCCee--ec-cCccccCHHHHHHHH
Q 042026          262 --NH--------------YKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQ--CS-CGTTFSRKDKLMGHV  319 (335)
Q Consensus       262 --~h--------------~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~--C~-C~~~F~~~~~L~~H~  319 (335)
                        .+              +......+.+.|..  |- ..+.....+..|.. |...+++.  +. |.+.|.....|..|+
T Consensus       360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  438 (467)
T COG5048         360 SSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCI-RNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHK  438 (467)
T ss_pred             ccccccccCCCCccchhhccCccCCccccccccchh-hhhccccccccccccccccCCcCCCCCcchhhccCcccccccc
Confidence              11              11111234444432  55 67777777777777 77666544  44 888888888888888


Q ss_pred             hhhcCCCCcccC
Q 042026          320 ALFVGHTPAVNV  331 (335)
Q Consensus       320 ~~H~gekp~~c~  331 (335)
                      +.|....++.|.
T Consensus       439 ~~~~~~~~~~~~  450 (467)
T COG5048         439 KIHTNHAPLLCS  450 (467)
T ss_pred             cccccCCceeec
Confidence            888777666554

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.60  E-value=0.095  Score=28.82  Aligned_cols=19  Identities=37%  Similarity=0.898  Sum_probs=11.1

Q ss_pred             eec-cCccccCHHHHHHHHhh
Q 042026          302 QCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       302 ~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      .|+ ||+.| ..+.|.+|+++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            466 66666 55556666543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.36  E-value=0.13  Score=30.50  Aligned_cols=23  Identities=22%  Similarity=0.777  Sum_probs=20.5

Q ss_pred             ceecccccccccCcHHHHHHHHH
Q 042026          189 THYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      +|.|.+|++.|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58999999999999999999854

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146 consensus Homeobox protein [General function prediction only]

Probab=90.77  E-value=0.53  Score=50.25  Aligned_cols=47  Identities=19%  Similarity=0.272  Sum_probs=37.5

Q ss_pred             CCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHH
Q 042026          157 NANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHM  209 (335)
Q Consensus       157 ~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~  209 (335)
                      ...+.|..|++.+.....+. ++.     ....|+|..|...|...+.|..|.
T Consensus      1258 sGe~~c~~~~~~~~~~~~~~-~l~-----~~~~~~~~~~~~~~~~~~~l~~~~ 1304 (1406)
T KOG1146|consen 1258 SGEGECGAVDELLTPSFGIS-TLD-----VTHRYLCRQCKMAFDGEAPLTAHQ 1304 (1406)
T ss_pred             CCcchhhhccccccCcccee-ecc-----cchhHHHHHHHhhhcchhHHHHHH
Confidence            34488999999888766655 544     445699999999999999999997

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=90.76  E-value=0.18  Score=27.67  Aligned_cols=21  Identities=29%  Similarity=0.706  Sum_probs=16.0

Q ss_pred             eecccccccccCcHHHHHHHHH
Q 042026          190 HYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       190 ~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      ..|+.||+.| ....|.+|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4688888888 66788888753

>KOG2482 consensus Predicted C2H2-type Zn-finger protein [Transcription]

Probab=90.12  E-value=0.38  Score=43.78  Aligned_cols=49  Identities=27%  Similarity=0.373  Sum_probs=39.0

Q ss_pred             eecccCCCccCCCHHHHHHHHh--ccC--------------------------CCCeeec-cCccccCHHHHHHHHhhh
Q 042026          273 YVCKRCNRKQFSVLSDLRTHEK--HCG--------------------------DSKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       273 y~C~~C~~k~F~~~~~L~~H~~--H~g--------------------------~~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      .+|-.|. ...-+...|..||+  |.-                          .+.-.|- |...|-....|..||.-+
T Consensus       280 v~CLfC~-~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  280 VVCLFCT-NFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             eEEEeec-cchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            6999999 88888999999999  741                          1123466 999999999999998744

>smart00451 ZnF_U1 U1-like zinc finger

Probab=89.71  E-value=0.31  Score=28.78  Aligned_cols=22  Identities=32%  Similarity=0.566  Sum_probs=16.6

Q ss_pred             ceecccCCCccCCCHHHHHHHHh
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      +|.|..|+ +.|.....+..|++
T Consensus         3 ~~~C~~C~-~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCN-VTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccC-CccCCHHHHHHHHC
Confidence            46778887 77877777777775

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=89.43  E-value=0.1  Score=44.92  Aligned_cols=48  Identities=21%  Similarity=0.251  Sum_probs=40.0

Q ss_pred             CCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHH-HHHhc
Q 042026          160 IPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMH-MRAHG  213 (335)
Q Consensus       160 ~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H-~r~H~  213 (335)
                      --|=.|...|.+..-|+.|++..|      |+|.+|.|...+--.|..| |.+|.
T Consensus        11 pwcwycnrefddekiliqhqkakh------fkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAKH------FKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhcc------ceeeeehhhhccCCCceeehhhhhh
Confidence            347789999999999999998877      9999999987777778777 66664

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=88.71  E-value=0.12  Score=44.47  Aligned_cols=48  Identities=25%  Similarity=0.488  Sum_probs=38.5

Q ss_pred             cceecccCCCccCCCHHHHHHHHhccCCCCeeec-cCccccCHHHHHHH-Hhhhc
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCS-CGTTFSRKDKLMGH-VALFV  323 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~H~g~~~~~C~-C~~~F~~~~~L~~H-~~~H~  323 (335)
                      |+| |.+|+ +.|.....|..|++   .|-|+|. |.|...+--.|..| |.+|.
T Consensus        10 kpw-cwycn-refddekiliqhqk---akhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   10 KPW-CWYCN-REFDDEKILIQHQK---AKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             Cce-eeecc-cccchhhhhhhhhh---hccceeeeehhhhccCCCceeehhhhhh
Confidence            454 78999 99999999999988   3349999 99887777777777 77773

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=86.75  E-value=0.62  Score=42.52  Aligned_cols=41  Identities=24%  Similarity=0.572  Sum_probs=28.3

Q ss_pred             ccCCCHHHHHHHHhccCCCCeeec---cC----ccccCHHHHHHHHhhhcC
Q 042026          281 KQFSVLSDLRTHEKHCGDSKWQCS---CG----TTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       281 k~F~~~~~L~~H~~H~g~~~~~C~---C~----~~F~~~~~L~~H~~~H~g  324 (335)
                      .-|..-.+|-+|-+|   .-|.|.   |-    ..|.....|..|+...+|
T Consensus       259 QYFK~Y~~Le~HF~~---~hy~ct~qtc~~~k~~vf~~~~el~~h~~~~h~  306 (493)
T COG5236         259 QYFKSYEDLEAHFRN---AHYCCTFQTCRVGKCYVFPYHTELLEHLTRFHK  306 (493)
T ss_pred             hhhhCHHHHHHHhhc---CceEEEEEEEecCcEEEeccHHHHHHHHHHHhh
Confidence            347777888888772   227775   63    368888899999765544

>KOG2231 consensus Predicted E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]

Probab=85.28  E-value=1.7  Score=43.83  Aligned_cols=126  Identities=16%  Similarity=0.262  Sum_probs=70.4

Q ss_pred             CCCCCCCCcCC---------------CcchhHHHHHHhhcCCCcceeccccccc---c------cCcHHHHHHHHHhc-C
Q 042026          160 IPVAENGESFS---------------EINGDIIEVDAVDLLAKYTHYCQVCGKG---F------KRDANLRMHMRAHG-D  214 (335)
Q Consensus       160 ~~c~~c~~~~~---------------~~~~~~~h~~~~~~~~~~~~~C~~C~k~---f------~~~~~L~~H~r~H~-~  214 (335)
                      +.|..|+..|.               ....|..|+...|    +.+.|..|-..   |      .+...|..|++.-- +
T Consensus       100 ~~C~~C~~~~~~~~~~~~~~~c~~~~s~~~Lk~H~~~~H----~~~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d  175 (669)
T KOG2231|consen  100 HSCHICDRRFRALYNKKECLHCTEFKSVENLKNHMRDQH----KLHLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPD  175 (669)
T ss_pred             hhcCccccchhhhcccCCCccccchhHHHHHHHHHHHhh----hhhccccccccceeeeeeeehehHHHHHHHHhcCCCc
Confidence            56777776663               5667778886555    33666666421   2      33456777775421 2


Q ss_pred             CCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCccccc---------------ceeeeeeCCcceecc-
Q 042026          215 EYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVK---------------NHYKRSHCPKMYVCK-  276 (335)
Q Consensus       215 ~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k---------------~h~~~h~~~k~y~C~-  276 (335)
                      +..+.-      .-.|..|...|-  ..+.+|++.    .-|.|..|.+               .|++.+    -|.|. 
T Consensus       176 ~~s~rG------hp~C~~C~~~fld~~el~rH~~~----~h~~chfC~~~~~~neyy~~~~dLe~HfR~~----HflCE~  241 (669)
T KOG2231|consen  176 DESCRG------HPLCKFCHERFLDDDELYRHLRF----DHEFCHFCDYKTGQNEYYNDYDDLEEHFRKG----HFLCEE  241 (669)
T ss_pred             cccccC------CccchhhhhhhccHHHHHHhhcc----ceeheeecCcccccchhcccchHHHHHhhhc----Cccccc
Confidence            221111      111245666665  445555554    4477888853               244443    47787 


Q ss_pred             -cCCCccCCCHHHHHHHHh-c----cCCCCeee
Q 042026          277 -RCNRKQFSVLSDLRTHEK-H----CGDSKWQC  303 (335)
Q Consensus       277 -~C~~k~F~~~~~L~~H~~-H----~g~~~~~C  303 (335)
                       .|..+.|...-.+..|++ |    .-++-|.|
T Consensus       242 ~~C~~~~f~~~~~~ei~lk~~~~~~~~e~~~~~  274 (669)
T KOG2231|consen  242 EFCRTKKFYVAFELEIELKAHNRFIQHEKCYIC  274 (669)
T ss_pred             cccccceeeehhHHHHHHHhhccccchheeccC
Confidence             677677777756666665 3    34444555

>PHA00626 hypothetical protein

Probab=83.22  E-value=1.1  Score=29.47  Aligned_cols=31  Identities=23%  Similarity=0.244  Sum_probs=18.4

Q ss_pred             CCcccccc-eeeeeeC---CcceecccCCCccCCCH
Q 042026          255 KSMICVKN-HYKRSHC---PKMYVCKRCNRKQFSVL  286 (335)
Q Consensus       255 ~C~~C~k~-h~~~h~~---~k~y~C~~C~~k~F~~~  286 (335)
                      .|+.|+.. +++.-..   ...|+|+.|| ..|+..
T Consensus         2 ~CP~CGS~~Ivrcg~cr~~snrYkCkdCG-Y~ft~~   36 (59)
T PHA00626          2 SCPKCGSGNIAKEKTMRGWSDDYVCCDCG-YNDSKD   36 (59)
T ss_pred             CCCCCCCceeeeeceecccCcceEcCCCC-Ceechh
Confidence            46777763 5443332   2468888888 766543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.80  E-value=0.61  Score=30.68  Aligned_cols=25  Identities=24%  Similarity=0.436  Sum_probs=17.1

Q ss_pred             CCcceecccCCCccCCCHHHHHHHHh
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      ++--+.|+.|| ..|....++.+|..
T Consensus        14 GE~~lrCPRC~-~~FR~~K~Y~RHVN   38 (65)
T COG4049          14 GEEFLRCPRCG-MVFRRRKDYIRHVN   38 (65)
T ss_pred             CceeeeCCchh-HHHHHhHHHHHHhh
Confidence            45566777777 77777777777765

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=81.97  E-value=0.74  Score=27.06  Aligned_cols=7  Identities=57%  Similarity=1.521  Sum_probs=4.1

Q ss_pred             eecccCC
Q 042026          273 YVCKRCN  279 (335)
Q Consensus       273 y~C~~C~  279 (335)
                      |.|..||
T Consensus         2 ~~C~~CG    8 (33)
T cd00350           2 YVCPVCG    8 (33)
T ss_pred             EECCCCC
Confidence            5566666

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=80.47  E-value=0.92  Score=34.77  Aligned_cols=29  Identities=21%  Similarity=0.495  Sum_probs=16.0

Q ss_pred             CCcccccceeeeeeCCcceecccCCCccCCCH
Q 042026          255 KSMICVKNHYKRSHCPKMYVCKRCNRKQFSVL  286 (335)
Q Consensus       255 ~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~  286 (335)
                      .|+.||++||-...  .|..|+.|| ..|.-.
T Consensus        11 ~Cp~CG~kFYDLnk--~PivCP~CG-~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDLNK--DPIVCPKCG-TEFPPE   39 (108)
T ss_pred             cCCCCcchhccCCC--CCccCCCCC-CccCcc
Confidence            45555555554444  556666666 555443

The function of members of this family is unknown.

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=80.40  E-value=0.41  Score=39.20  Aligned_cols=13  Identities=31%  Similarity=0.825  Sum_probs=7.1

Q ss_pred             eecccCCCccCCCH
Q 042026          273 YVCKRCNRKQFSVL  286 (335)
Q Consensus       273 y~C~~C~~k~F~~~  286 (335)
                      |.|+.|| +.|...
T Consensus        29 ~~c~~c~-~~f~~~   41 (154)
T PRK00464         29 RECLACG-KRFTTF   41 (154)
T ss_pred             eeccccC-CcceEe
Confidence            5555555 555543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	335
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-08

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 65/149 (43%), Gaps = 24/149 (16%)
Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKL--WNKKHA 249
           C  CGK F R  +L  H R H  E         P K      GK+ S +  L    + H 
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGE--------KPYK--CPECGKSFSDKKDLTRHQRTHT 73
Query: 250 KFQPLKSMICVKNH--------YKRSHC-PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS 299
             +P K   C K+         ++R+H   K Y C  C  K FS L+ LR H++ H G+ 
Sbjct: 74  GEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECG-KSFSQLAHLRAHQRTHTGEK 132
Query: 300 KWQC-SCGTTFSRKDKLMGHVALFVGHTP 327
            ++C  CG +FSR+D L  H     G  P
Sbjct: 133 PYKCPECGKSFSREDNLHTHQRTHTGEKP 161

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	335
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-04
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-05
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-04
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-06
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	8e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-04
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	7e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-04

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 54.4 bits (132), Expect = 1e-09
 Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 32/129 (24%)

Query: 195 CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPL 254
           C K + + ++L+MH R H  E         P + +     +  S   +L  K+H      
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGE--------KPYQCDFKDCERRFSRSDQL--KRH------ 57

Query: 255 KSMICVKNHYKRSH-CPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS---CGTTF 309
                     +R H   K + CK C  ++FS    L+TH + H G+  + C    C   F
Sbjct: 58  ----------QRRHTGVKPFQCKTCQ-RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF 106

Query: 310 SRKDKLMGH 318
           +R D+L+ H
Sbjct: 107 ARSDELVRH 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 49.8 bits (120), Expect = 5e-08
 Identities = 33/139 (23%), Positives = 51/139 (36%), Gaps = 39/139 (28%)

Query: 188 YTHYCQVCGKGFKRDANLRMHMRAHGDE-YKTSAALTNPLKKNGSSMGKTMSLQSKLWNK 246
                + C K F+ ++ +R H+  HG   +  +              GK     SKL  K
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAEC------------GKAFVESSKL--K 51

Query: 247 KHAKFQPLKSMICVKNHYKRSH-CPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQ 302
           +H                +  H   K + C    C  K+FS+  +LRTH + H GD  + 
Sbjct: 52  RH----------------QLVHTGEKPFQCTFEGCG-KRFSLDFNLRTHVRIHTGDRPYV 94

Query: 303 CS---CGTTFSRKDKLMGH 318
           C    C   F++   L  H
Sbjct: 95  CPFDGCNKKFAQSTNLKSH 113

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 30/112 (26%), Positives = 41/112 (36%), Gaps = 31/112 (27%)

Query: 190 HYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           H C  CGK F   + L+ H   H  E K       P +      GK  SL   L  + H 
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGE-K-------PFQCTFEGCGKRFSLDFNL--RTH- 83

Query: 250 KFQPLKSMICVKNHYKRSHC-PKMYVCKR--CNRKQFSVLSDLRTHEK-HCG 297
                           R H   + YVC    CN K+F+  ++L++H   H  
Sbjct: 84  ---------------VRIHTGDRPYVCPFDGCN-KKFAQSTNLKSHILTHAK 119

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 47.9 bits (115), Expect = 1e-07
 Identities = 14/106 (13%), Positives = 28/106 (26%), Gaps = 33/106 (31%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C++C + F R  +L  H+R H  E  +                 G+  +   +   K+H 
Sbjct: 6   CRICMRNFSRSDHLTTHIRTHTGEKPFACDIC------------GRKFARSDER--KRH- 50

Query: 250 KFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKH 295
                          +        +  +   +  S    L      
Sbjct: 51  ---------------RDIQHILPILEDKVE-ELLSKNYHLENEVAR 80

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 39.0 bits (92), Expect = 2e-04
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGH 318
           K + C+ C  + FS    L TH + H G+  + C  CG  F+R D+   H
Sbjct: 2   KPFQCRICM-RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 37.1 bits (87), Expect = 8e-04
 Identities = 9/62 (14%), Positives = 16/62 (25%), Gaps = 12/62 (19%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTH-----EKHCGDSKWQCS-CGTTFSRKDKLMGHVALFVG 324
           K + C  C  ++F+   + + H                       S+   L   VA    
Sbjct: 30  KPFACDICG-RKFARSDERKRHRDIQHIL-----PILEDKVEELLSKNYHLENEVARLKK 83

Query: 325 HT 326
             
Sbjct: 84  LV 85

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 39/135 (28%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C  C K F     L++H R H  E  ++                GK    +  L   +H 
Sbjct: 10  CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKC------------GKCYFRKENL--LEH- 54

Query: 250 KFQPLKSMICVKNHYKRSHCP----KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS 304
                          +  +C     +++ C  C  + F    +LR H   H G+  ++CS
Sbjct: 55  ---------------EARNCMNRSEQVFTCSVCQ-ETFRRRMELRLHMVSHTGEMPYKCS 98

Query: 305 -CGTTFSRKDKLMGH 318
            C   F +K  L  H
Sbjct: 99  SCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 3/58 (5%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT 326
               C  C  K+F     L+ H + H G+  ++C  CG  + RK+ L+ H A    + 
Sbjct: 6   SGVECPTC-HKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 48.4 bits (116), Expect = 3e-07
 Identities = 35/136 (25%), Positives = 46/136 (33%), Gaps = 35/136 (25%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKF 251
           C    + FK    L +HMR H  E         P K       K+ S    L  K H   
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGE--------KPHKCTFEGCRKSYSRLENL--KTH--- 88

Query: 252 QPLKSMICVKNHYKRSH-CPKMYVCK--RCNRKQFSVLSDLRTHEK--HCGDSKWQCS-- 304
                         RSH   K Y+C+   C+ K FS  SD   H+   H  +  + C   
Sbjct: 89  -------------LRSHTGEKPYMCEHEGCS-KAFSNASDRAKHQNRTHSNEKPYVCKLP 134

Query: 305 -CGTTFSRKDKLMGHV 319
            C   ++    L  HV
Sbjct: 135 GCTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 41.8 bits (99), Expect = 5e-05
 Identities = 29/107 (27%), Positives = 37/107 (34%), Gaps = 30/107 (28%)

Query: 195 CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPL 254
           C K + R  NL+ H+R+H  E         P         K  S  S             
Sbjct: 75  CRKSYSRLENLKTHLRSHTGE--------KPYMCEHEGCSKAFSNASDR----------- 115

Query: 255 KSMICVKNHYKRSH-CPKMYVCKR--CNRKQFSVLSDLRTHEK-HCG 297
                   H  R+H   K YVCK   C  K+++  S LR H K   G
Sbjct: 116 ------AKHQNRTHSNEKPYVCKLPGCT-KRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 28/139 (20%), Positives = 40/139 (28%), Gaps = 38/139 (27%)

Query: 192 CQVCGKGFKRDANLRMHM---RAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNK 246
              C + F     L  H+     HG+   +              S   +    Q  L   
Sbjct: 6   WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCH-------WGGCSRELRPFKAQYML--- 55

Query: 247 KHAKFQPLKSMICVKNHYKRSHC-PKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQ 302
                           H  R H   K + C    C  K +S L +L+TH + H G+  + 
Sbjct: 56  --------------VVH-MRRHTGEKPHKCTFEGCR-KSYSRLENLKTHLRSHTGEKPYM 99

Query: 303 C---SCGTTFSRKDKLMGH 318
           C    C   FS       H
Sbjct: 100 CEHEGCSKAFSNASDRAKH 118

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 39/132 (29%), Positives = 53/132 (40%), Gaps = 36/132 (27%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C  CGK F R  +L  H R H  E  YK                GK+ S +  L   +H 
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPEC------------GKSFSDKKDL--TRH- 68

Query: 250 KFQPLKSMICVKNHYKRSHC-PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CG 306
                          +R+H   K Y C  C  K FS  ++LR H++ H G+  + C  CG
Sbjct: 69  ---------------QRTHTGEKPYKCPEC-GKSFSQRANLRAHQRTHTGEKPYACPECG 112

Query: 307 TTFSRKDKLMGH 318
            +FS+   L  H
Sbjct: 113 KSFSQLAHLRAH 124

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 46.3 bits (111), Expect = 3e-06
 Identities = 42/132 (31%), Positives = 56/132 (42%), Gaps = 36/132 (27%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C  CGK F + ANLR H R H  E  Y                 GK+ S  + L  + H 
Sbjct: 80  CPECGKSFSQRANLRAHQRTHTGEKPYACPEC------------GKSFSQLAHL--RAH- 124

Query: 250 KFQPLKSMICVKNHYKRSHC-PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CG 306
                          +R+H   K Y C  C  K FS   +L TH++ H G+  ++C  CG
Sbjct: 125 ---------------QRTHTGEKPYKCPEC-GKSFSREDNLHTHQRTHTGEKPYKCPECG 168

Query: 307 TTFSRKDKLMGH 318
            +FSR+D L  H
Sbjct: 169 KSFSRRDALNVH 180

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 45.5 bits (109), Expect = 5e-06
 Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 36/132 (27%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C  CGK F    +L  H R H  E  YK                GK+ S ++ L  + H 
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC------------GKSFSQRANL--RAH- 96

Query: 250 KFQPLKSMICVKNHYKRSHC-PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CG 306
                          +R+H   K Y C  C  K FS L+ LR H++ H G+  ++C  CG
Sbjct: 97  ---------------QRTHTGEKPYACPEC-GKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 307 TTFSRKDKLMGH 318
            +FSR+D L  H
Sbjct: 141 KSFSREDNLHTH 152

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.4 bits (111), Expect = 2e-06
 Identities = 28/137 (20%), Positives = 42/137 (30%), Gaps = 40/137 (29%)

Query: 193 QVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQ 252
           + C KGF    +L  H   H  E K           +        + ++ +  KKH    
Sbjct: 48  EGCEKGFTSLHHLTRHSLTHTGE-K-------NFTCDSDGCDLRFTTKANM--KKH---- 93

Query: 253 PLKSMICVKNHYKRSH-----CPKMYVC--KRCNRKQFSVLSDLRTHEK-HCGDSKWQCS 304
                                C   YVC  + C  K F   + L+ H+  H     ++C 
Sbjct: 94  ------------FNRFHNIKICV--YVCHFENC-GKAFKKHNQLKVHQFSHTQQLPYECP 138

Query: 305 ---CGTTFSRKDKLMGH 318
              C   FS   +L  H
Sbjct: 139 HEGCDKRFSLPSRLKRH 155

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 43.7 bits (104), Expect = 2e-05
 Identities = 22/133 (16%), Positives = 41/133 (30%), Gaps = 36/133 (27%)

Query: 195 CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPL 254
           CG  + ++  L+ H+  H  E         P         K  +    L   +H      
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGE--------KPFPCKEEGCEKGFTSLHHL--TRH------ 63

Query: 255 KSMICVKNHYKRSHC-PKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKWQ--CS---C 305
                       +H   K + C    C+  +F+  ++++ H             C    C
Sbjct: 64  ----------SLTHTGEKNFTCDSDGCD-LRFTTKANMKKHFNRFHNIKICVYVCHFENC 112

Query: 306 GTTFSRKDKLMGH 318
           G  F + ++L  H
Sbjct: 113 GKAFKKHNQLKVH 125

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 41.4 bits (98), Expect = 1e-04
 Identities = 28/124 (22%), Positives = 43/124 (34%), Gaps = 33/124 (26%)

Query: 195 CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPL 254
           C   F   AN++ H     +  K           +  + GK     ++L  K H      
Sbjct: 80  CDLRFTTKANMKKHFNRFHNI-KIC-----VYVCHFENCGKAFKKHNQL--KVH------ 125

Query: 255 KSMICVKNHYKRSHC-PKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKWQCS----CG 306
                     + SH     Y C    C+ K+FS+ S L+ HEK H G    +       G
Sbjct: 126 ----------QFSHTQQLPYECPHEGCD-KRFSLPSRLKRHEKVHAGYPCKKDDSCSFVG 174

Query: 307 TTFS 310
            T++
Sbjct: 175 KTWT 178

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 46.8 bits (110), Expect = 8e-06
 Identities = 46/323 (14%), Positives = 93/323 (28%), Gaps = 102/323 (31%)

Query: 8   SSGPASNPSNVSSLLYSVSFLKQKVHQLQ---------------SVITILVSQDHHQPTE 52
           +        NVS L      L+Q + +L+               + + + V   +    +
Sbjct: 121 NDNQVFAKYNVSRL-QPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK 179

Query: 53  STS----IALANMRSLVQEIILTASSLMVTCQQMSPPPAS-TSGTNNITTNEISQLDPNN 107
                  + L N  S  + ++     L     Q+ P   S +  ++NI      +L  ++
Sbjct: 180 MDFKIFWLNLKNCNS-PETVLEMLQKL---LYQIDPNWTSRSDHSSNI------KLRIHS 229

Query: 108 NQEISSGLQGCYNFSEAF----DTWYGDH-NDF-------VTTDDDNNRGMHSNNVSNYI 155
            Q     L     +        +       N F       +TT            V++++
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRF--------KQVTDFL 281

Query: 156 NNAN---IPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAH 212
           + A    I +  +  + +         +   LL KY                     R  
Sbjct: 282 SAATTTHISLDHHSMTLT-------PDEVKSLLLKYL------------------DCRP- 315

Query: 213 GDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNK-KHAKFQPLKSMI--CVKN----HYK 265
             +       TNP +   S + +++      W+  KH     L ++I   +       Y+
Sbjct: 316 -QDLPREVLTTNPRRL--SIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYR 372

Query: 266 RSHCPKMYVCKRCNRKQFSVLSD 288
                KM+        + SV   
Sbjct: 373 -----KMF-------DRLSVFPP 383

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 265 KRSHCP-KMYVCKRCNRKQFSVLSDLRTHE---KHCGDSKWQCS-CGTTFSRKDKLMGH 318
           + +      Y CK C+ + ++ +S+   H           + C  C   F+RKD +  H
Sbjct: 2   EFTKEGEHTYRCKVCS-RVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAH 59

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 5/53 (9%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSK--WQCS-CGTTFSRKDKLMGHV 319
           K Y C  C+  +F+    ++ H      ++   + C  C T  +RK  L  H+
Sbjct: 14  KPYECYICH-ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.1 bits (87), Expect = 6e-04
 Identities = 5/27 (18%), Positives = 11/27 (40%), Gaps = 1/27 (3%)

Query: 192 CQVCGKGFKRDANLRMHMRAH-GDEYK 217
           C +C   F +   ++MH+     +   
Sbjct: 18  CYICHARFTQSGTMKMHILQKHTENVA 44

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 39.7 bits (93), Expect = 9e-05
 Identities = 8/23 (34%), Positives = 13/23 (56%)

Query: 190 HYCQVCGKGFKRDANLRMHMRAH 212
             C++CG   ++ A+L  H R H
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKH 30

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 37.4 bits (87), Expect = 5e-04
 Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 6/51 (11%)

Query: 273 YVCKRCNRKQFSVLSDL----RTHEKHCGDSKWQCS-CGTTFSRKDKLMGH 318
             C+ C        + L    R H +     ++ C  CG  F + D +  H
Sbjct: 8   LQCEICG-FTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAH 57

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 36.6 bits (85), Expect = 8e-04
 Identities = 6/27 (22%), Positives = 11/27 (40%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKT 218
           C+ CGK F++  ++  H          
Sbjct: 41  CEFCGKRFEKPDSVAAHRSKSHPALLL 67

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 39.8 bits (94), Expect = 9e-05
 Identities = 26/113 (23%), Positives = 39/113 (34%), Gaps = 38/113 (33%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C++CGK F+   +L  H  +H  E  Y                 G     + ++      
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVC------------GLRFKRKDRM------ 51

Query: 250 KFQPLKSMICVKNHYKRSH---CPKMYVCKRCNRKQFSVLSDLRTHEK--HCG 297
                       +++ RSH     K Y+C+ C  K FS    L  H K  H G
Sbjct: 52  ------------SYHVRSHDGSVGKPYICQSCG-KGFSRPDHLNGHIKQVHSG 91

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGH 318
           K + C+ C  + FS    L TH + H G+  + C  CG  F+R D+   H
Sbjct: 33  KPFQCRICM-RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 37.4 bits (88), Expect = 6e-04
 Identities = 18/107 (16%), Positives = 33/107 (30%), Gaps = 35/107 (32%)

Query: 195 CGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQ 252
           C + F +  +L  H+R H  +  ++                 +  S    L    H    
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRIC------------MRNFSRSDHL--TTH---- 53

Query: 253 PLKSMICVKNHYKRSH-CPKMYVCKRCNRKQFSVLSDLRTHEK-HCG 297
                        R+H   K + C  C  ++F+   + + H K H  
Sbjct: 54  ------------IRTHTGEKPFACDICG-RKFARSDERKRHTKIHLR 87

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 25/134 (18%), Positives = 41/134 (30%), Gaps = 27/134 (20%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKF 251
            + C + F     L  H+                  +     GK+   + KL        
Sbjct: 28  KKSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKYKL-------- 78

Query: 252 QPLKSMICVKNHYKRSHCP-KMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQCS--- 304
                     NH  R H   K + C    C  K F+   +L+ H++ H G+  ++C    
Sbjct: 79  ---------VNH-IRVHTGEKPFPCPFPGCG-KIFARSENLKIHKRTHTGEKPFKCEFEG 127

Query: 305 CGTTFSRKDKLMGH 318
           C   F+       H
Sbjct: 128 CDRRFANSSDRKKH 141

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 40.7 bits (96), Expect = 1e-04
 Identities = 29/117 (24%), Positives = 39/117 (33%), Gaps = 31/117 (26%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKF 251
           C   GK FK    L  H+R H  E         P        GK  +    L  K H   
Sbjct: 65  CPREGKSFKAKYKLVNHIRVHTGE--------KPFPCPFPGCGKIFARSENL--KIH--- 111

Query: 252 QPLKSMICVKNHYKRSHC-PKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQCS 304
                        KR+H   K + C+   C+ ++F+  SD + H   H  D     S
Sbjct: 112 -------------KRTHTGEKPFKCEFEGCD-RRFANSSDRKKHMHVHTSDKSGPSS 154

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGH 318
           + +VC+ C  + F+    L+ H + H  +  + C  C   F+R+D L+ H
Sbjct: 1   RSFVCEVCT-RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 192 CQVCGKGFKRDANLRMHMRAH 212
           C++CG  F+    L+ H+R H
Sbjct: 14  CEICGTRFRHLQTLKSHLRIH 34

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.9 bits (92), Expect = 2e-04
 Identities = 29/116 (25%), Positives = 36/116 (31%), Gaps = 35/116 (30%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           C+VCGK F R   L+ HMR H     YK                    +  S L   KH 
Sbjct: 11  CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTC------------DYAAADSSSL--NKH- 55

Query: 250 KFQPLKSMICVKNHYKRSHC-PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC 303
                           R H   + + C+ C        S L  H + H GDS    
Sbjct: 56  ---------------LRIHSDERPFKCQICP-YASRNSSQLTVHLRSHTGDSGPSS 95

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.2 bits (86), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 190 HYCQVCGKGFKRDANLRMHMRAHGDE 215
             C++CGK F+   +L  H  +H  E
Sbjct: 13  VACEICGKIFRDVYHLNRHKLSHSGE 38

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 7/64 (10%)

Query: 261 KNHYKRSHC-PKMYVC--KRCNRKQFSVLSDLRTHE-KHCGDSKWQCS-CGTTFSRKDKL 315
           K H  R+H   K Y C  + C+  +F+   +L  H  KH G   +QC  C  +FSR D L
Sbjct: 34  KAH-LRTHTGEKPYKCTWEGCD-WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL 91

Query: 316 MGHV 319
             H+
Sbjct: 92  ALHM 95

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 25/109 (22%), Positives = 36/109 (33%), Gaps = 30/109 (27%)

Query: 189 THYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNK 246
            HYC    C K + + ++L+ H+R H  E         P K          +   +L   
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTHTGE--------KPYKCTWEGCDWRFARSDEL--T 64

Query: 247 KHAKFQPLKSMICVKNHYKRSHC-PKMYVCKRCNRKQFSVLSDLRTHEK 294
           +H                 R H   K + C  CN + FS    L  H K
Sbjct: 65  RH----------------YRKHTGAKPFQCGVCN-RSFSRSDHLALHMK 96

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 37.4 bits (88), Expect = 4e-04
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 3/50 (6%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGH 318
           K Y C RC    F    +L +H+  H G+  ++C+ CG  F+R   L  H
Sbjct: 16  KPYKCDRCQ-ASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.6 bits (89), Expect = 4e-04
 Identities = 19/101 (18%), Positives = 27/101 (26%), Gaps = 23/101 (22%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKF 251
           C+ C   +     L +HM   G  Y+     T+       S  +  SL            
Sbjct: 22  CKDCSAAYDTLVELTVHMNETG-HYRDDNHETDNNNPKRWSKPRKRSLLE---------- 70

Query: 252 QPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTH 292
                         +    K+  C  C    F  L DL  H
Sbjct: 71  -----------MEGKEDAQKVLKCMYCG-HSFESLQDLSVH 99

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGH 318
           K Y C  C  K FS  S L  H++ H G+  ++C  CG  FS+   L+ H
Sbjct: 13  KPYGCVECG-KAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query: 192 CQVCGKGFKRDANLRMHMRAH 212
           C+ CG  F + A+LR H+  H
Sbjct: 14  CETCGARFVQVAHLRAHVLIH 34

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 37.1 bits (87), Expect = 7e-04
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 7/54 (12%)

Query: 271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW----QCS-CGTTFSRKDKLMGH 318
           K Y C  C+ K F     L  H K +   +       CS CG TF+R++ +  H
Sbjct: 14  KPYACSHCD-KTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 37.8 bits (89), Expect = 7e-04
 Identities = 22/132 (16%), Positives = 31/132 (23%), Gaps = 45/132 (34%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE--YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA 249
           CQ CGK F   +    HM  H     Y                 GK   ++  L    H 
Sbjct: 13  CQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVC------------GKKFKMKHHLV--GH- 56

Query: 250 KFQPLKSMICVKNHYKRSHC-PKMYVCKRCNRKQFSVLSDL--RTH--EKHCGDSKWQCS 304
                           + H   K Y C  C  K+F              K      ++ +
Sbjct: 57  ---------------MKIHTGIKPYECNICA-KRFMWRDSFHRHVTSCTKS-----YEAA 95

Query: 305 -CGTTFSRKDKL 315
                 +     
Sbjct: 96  KAEQNTTEASGP 107

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 23/113 (20%), Positives = 35/113 (30%), Gaps = 36/113 (31%)

Query: 190 HYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKK 247
           + C    CGK FK+   L++H  +H  +         P +       K  SL S+L  K+
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQ--------LPYECPHEGCDKRFSLPSRL--KR 51

Query: 248 HAKFQPLKSMICVKNHYKRSH----CPKMYVCKRCNRKQFSVLSDLRTHEKHC 296
           H                ++ H    C K   C           +    H   C
Sbjct: 52  H----------------EKVHAGYPCKKDDSCSFV----GKTWTLYLKHVAEC 84

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 36.7 bits (86), Expect = 9e-04
 Identities = 25/86 (29%), Positives = 31/86 (36%), Gaps = 14/86 (16%)

Query: 247 KHAKFQPLKSMICVKNHYKRSHCP---------KMYVCKR--CNRKQFSVLSDLRTHE-K 294
           K           C K + K SH           K Y C    C   +F+   +L  H  K
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCG-WKFARSDELTRHYRK 59

Query: 295 HCGDSKWQCS-CGTTFSRKDKLMGHV 319
           H G   +QC  C   FSR D L  H+
Sbjct: 60  HTGHRPFQCQKCDRAFSRSDHLALHM 85

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	335
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.95
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.93
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.9
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.88
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.86
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.84
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.79
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.74
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.72
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.72
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.72
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.7
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.65
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.61
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.6
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.6
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.6
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.59
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.59
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.58
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.58
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.57
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.55
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.53
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.52
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.52
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.51
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.51
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.5
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.5
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.49
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.48
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.46
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.45
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.44
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.44
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.43
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.41
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.4
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.4
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.39
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.39
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.34
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.33
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.32
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.3
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.28
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.28
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.23
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.22
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.22
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.21
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.21
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.21
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.2
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.2
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.2
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.19
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.19
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.19
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.17
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.17
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.17
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.17
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.17
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.17
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.16
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.16
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.16
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.15
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.15
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.15
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.09
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.07
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.06
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.06
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.03
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.03
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.02
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.02
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.01
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.01
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.0
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.98
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.97
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.96
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.95
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.93
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.91
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.87
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.87
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.86
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.85
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.78
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.77
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.73
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.71
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.67
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.64
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.62
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.6
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.59
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.58
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.57
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.54
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.53
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.51
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.49
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.47
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.47
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.42
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.41
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.4
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.4
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.38
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.36
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.32
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.31
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.31
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.64
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.64
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.29
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.28
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.27
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.26
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.24
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.23
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.23
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.23
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.21
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.2
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.2
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.19
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.18
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.18
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.12
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.12
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.11
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.1
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.1
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.09
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.36
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.08
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.08
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.32
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.32
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.01
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.98
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.09
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.74
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.74
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.69
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.71
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.36
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.13
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.94
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.71
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.33
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.23
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.03
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	88.47
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.92
1pzw_A	80	Transcription factor grauzone; dimerization, trans	85.43
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	82.52

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=8e-33  Score=235.63  Aligned_cols=159  Identities=28%  Similarity=0.495  Sum_probs=130.7

Q ss_pred             CCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCch
Q 042026          157 NANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKT  236 (335)
Q Consensus       157 ~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~  236 (335)
                      +..+.|+.|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|++.|.++++|.|.+          |++.
T Consensus        19 ~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------C~~~   86 (190)
T 2i13_A           19 EKPYACPECGKSFSRSDHLAEHQRTHT--GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPE----------CGKS   86 (190)
T ss_dssp             ------------CCSSHHHHHGGGCC-----CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTT----------TCCE
T ss_pred             CCCCcCCCCccccCCHHHHHHHHHHcC--CCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcc----------cCCc
Confidence            345999999999999999999988765  6788999999999999999999999999999999865          5888


Q ss_pred             hh--hhhHHHHHHhcCCCCCCCccccc---------ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          237 MS--LQSKLWNKKHAKFQPLKSMICVK---------NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       237 f~--~~l~~h~~~h~~~~p~~C~~C~k---------~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |.  ..|..|++.|.++++|.|+.|++         .|++.|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~-~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG-KSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTC-CEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCC-cccCCHHHHHHHHHhcCCCCCeECC
Confidence            87  67888999999999999999998         588899999999999999 99999999999999 9999999999


Q ss_pred             -cCccccCHHHHHHHHhhhcCCCCc
Q 042026          305 -CGTTFSRKDKLMGHVALFVGHTPA  328 (335)
Q Consensus       305 -C~~~F~~~~~L~~H~~~H~gekp~  328 (335)
                       |++.|.+...|..|+++|+|++||
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCccCCHHHHHHHHHhcCCCCCC
Confidence             999999999999999999999997

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.95  E-value=6.5e-29  Score=211.37  Aligned_cols=146  Identities=30%  Similarity=0.553  Sum_probs=112.5

Q ss_pred             chhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcC
Q 042026          173 NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAK  250 (335)
Q Consensus       173 ~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~  250 (335)
                      ..+..|+..+.  ++++|.|++|++.|.....|..|++.|.++++|.|..          |++.|.  ..|..|++.|.+
T Consensus         7 ~~l~~h~~~~~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------C~~~f~~~~~l~~H~~~h~~   74 (190)
T 2i13_A            7 SSSVAQAALEP--GEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPE----------CGKSFSDKKDLTRHQRTHTG   74 (190)
T ss_dssp             --------------------------CCSSHHHHHGGGCC---CCEECTT----------TCCEESSHHHHHHHHHHHHC
T ss_pred             ccchhhhhhcC--CCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCC----------cCchhCCHHHHHHHHHhcCC
Confidence            34555655543  6788999999999999999999999999999999864          588887  678889999999


Q ss_pred             CCCCCCccccc---------ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHH
Q 042026          251 FQPLKSMICVK---------NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHV  319 (335)
Q Consensus       251 ~~p~~C~~C~k---------~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~  319 (335)
                      +++|.|+.|++         .|++.|+++++|.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+...|..|+
T Consensus        75 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~  153 (190)
T 2i13_A           75 EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECG-KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQ  153 (190)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTC-CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             CCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCC-CccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHH
Confidence            99999999998         588899999999999999 99999999999999 9999999999 999999999999999


Q ss_pred             hhhcCCCCcccC
Q 042026          320 ALFVGHTPAVNV  331 (335)
Q Consensus       320 ~~H~gekp~~c~  331 (335)
                      ++|+|++||.|.
T Consensus       154 ~~H~~~~~~~C~  165 (190)
T 2i13_A          154 RTHTGEKPYKCP  165 (190)
T ss_dssp             HHHHCCCCEECT
T ss_pred             HhcCCCCCeECC
Confidence            999999999985

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.93  E-value=2.2e-26  Score=195.72  Aligned_cols=155  Identities=23%  Similarity=0.288  Sum_probs=137.0

Q ss_pred             CCCCCC--CCCCCcCCCcchhHHHHHHhhcCCCcceec--ccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCC
Q 042026          157 NANIPV--AENGESFSEINGDIIEVDAVDLLAKYTHYC--QVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSS  232 (335)
Q Consensus       157 ~~~~~c--~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C--~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~  232 (335)
                      ...|.|  +.|++.|.....|..|+..+.  ++++|.|  .+|++.|.+...|..|+++|.++++|.|..        ..
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--------~~   79 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHT--GEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDS--------DG   79 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHH--CCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCS--------SS
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcC--CCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCC--------CC
Confidence            344889  799999999999999999877  6788999  899999999999999999999999988852        15


Q ss_pred             cCchhh--hhhHHHH-HHh-cCCCCCCC--ccccc---------ceeeeeeCCcceeccc--CCCccCCCHHHHHHHHh-
Q 042026          233 MGKTMS--LQSKLWN-KKH-AKFQPLKS--MICVK---------NHYKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-  294 (335)
Q Consensus       233 c~~~f~--~~l~~h~-~~h-~~~~p~~C--~~C~k---------~h~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-  294 (335)
                      |++.|.  ..|..|+ +.| .+.++|.|  +.|++         .|++.|+++++|.|+.  |+ +.|.....|+.|++ 
T Consensus        80 C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~-k~F~~~~~L~~H~~~  158 (190)
T 1tf6_A           80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCD-KRFSLPSRLKRHEKV  158 (190)
T ss_dssp             CCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCC-CBCSSHHHHHHHHTS
T ss_pred             CCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCC-chhcCHHHHHHHHHH
Confidence            689997  6788898 677 57899999  89998         5889999999999988  99 99999999999999 


Q ss_pred             ccCCCCeeec----cCccccCHHHHHHHHhhhcCC
Q 042026          295 HCGDSKWQCS----CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       295 H~g~~~~~C~----C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |+|   |.|.    |++.|.+...|..|+++|+|+
T Consensus       159 H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          159 HAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             SCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC--
T ss_pred             hCC---CcCCCCCcCCCccccHHHHHHHHHhhcCC
Confidence            998   7774    999999999999999999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=7.1e-25  Score=179.92  Aligned_cols=138  Identities=22%  Similarity=0.377  Sum_probs=100.7

Q ss_pred             CCCCCCCCCcCCCcchhHHHHHHhh-cCCCcceecccc-----cccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCC
Q 042026          159 NIPVAENGESFSEINGDIIEVDAVD-LLAKYTHYCQVC-----GKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSS  232 (335)
Q Consensus       159 ~~~c~~c~~~~~~~~~~~~h~~~~~-~~~~~~~~C~~C-----~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~  232 (335)
                      .+.|+.|++.|.+...|..|+...+ ..++++|.|.+|     ++.|.....|..|++.|.++++|.|.+        ..
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~--------~~   74 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTF--------EG   74 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCS--------TT
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCC--------CC
Confidence            3566677777777777777766432 335556665532     366777777777777776666666643        13


Q ss_pred             cCchhh--hhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceeccc--CCCccCCCHHHHHHHH-h-ccCCCCeee--c
Q 042026          233 MGKTMS--LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKR--CNRKQFSVLSDLRTHE-K-HCGDSKWQC--S  304 (335)
Q Consensus       233 c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~-~-H~g~~~~~C--~  304 (335)
                      |++.|.  ..|..|+++|++                   +++|.|..  |+ +.|.....|..|+ + |++++||.|  +
T Consensus        75 C~~~f~~~~~l~~H~~~h~~-------------------~~~~~C~~~~C~-~~f~~~~~L~~H~~~~H~~~~~~~C~~~  134 (155)
T 2gli_A           75 CRKSYSRLENLKTHLRSHTG-------------------EKPYMCEHEGCS-KAFSNASDRAKHQNRTHSNEKPYVCKLP  134 (155)
T ss_dssp             CCCCCSSHHHHHHHHHHTTT-------------------CCCEECCSTTCC-CEESSSSTTHHHHHHTTCSCCCEECCST
T ss_pred             CCCcccCHHHHHHHHHHcCC-------------------CCCeeCCCCCCC-CccCCHHHHHHHHHHhcCCCCCeeCCCC
Confidence            466665  445556666554                   47888988  99 9999999999999 6 999999999  4


Q ss_pred             -cCccccCHHHHHHHHhhhcC
Q 042026          305 -CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       305 -C~~~F~~~~~L~~H~~~H~g  324 (335)
                       |++.|.+.+.|..|+++|+|
T Consensus       135 ~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          135 GCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCCEESSHHHHHHHHHHSCC
T ss_pred             CCccccCCHHHHHHHHHhhcC
Confidence             99999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.90  E-value=4.7e-24  Score=181.24  Aligned_cols=130  Identities=21%  Similarity=0.394  Sum_probs=115.9

Q ss_pred             CCcceec--ccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCc--cc
Q 042026          186 AKYTHYC--QVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSM--IC  259 (335)
Q Consensus       186 ~~~~~~C--~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~--~C  259 (335)
                      ..++|.|  ..|++.|.....|..|+++|.++++|.|..        ..|++.|.  ..|..|+++|.+++||.|.  .|
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~--------~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   80 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKE--------EGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGC   80 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSS--------TTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSC
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCC--------CCCChhhCCHHHHHHHHHHccCCCceeCCCCCC
Confidence            5678999  789999999999999999999999888821        24588887  6788899999999999999  89


Q ss_pred             cc---------cee-eee-eCCcceec--ccCCCccCCCHHHHHHHHh-ccCCCCeee--c-cCccccCHHHHHHHHhhh
Q 042026          260 VK---------NHY-KRS-HCPKMYVC--KRCNRKQFSVLSDLRTHEK-HCGDSKWQC--S-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       260 ~k---------~h~-~~h-~~~k~y~C--~~C~~k~F~~~~~L~~H~~-H~g~~~~~C--~-C~~~F~~~~~L~~H~~~H  322 (335)
                      ++         .|+ +.| .++++|.|  ..|+ +.|.....|+.|++ |++++||.|  . |++.|.+.+.|..|+++|
T Consensus        81 ~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H  159 (190)
T 1tf6_A           81 DLRFTTKANMKKHFNRFHNIKICVYVCHFENCG-KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH  159 (190)
T ss_dssp             CCEESCHHHHHHHHHTTSSTTTSCCEECSSSSC-EECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSS
T ss_pred             CCccCCHHHHHHHHHHhcCCCcceeeCCCCCCc-cccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHh
Confidence            98         466 455 35789999  9999 99999999999999 999999999  5 999999999999999999


Q ss_pred             cC
Q 042026          323 VG  324 (335)
Q Consensus       323 ~g  324 (335)
                      +|
T Consensus       160 ~~  161 (190)
T 1tf6_A          160 AG  161 (190)
T ss_dssp             CS
T ss_pred             CC
Confidence            99

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.88  E-value=1.3e-22  Score=166.55  Aligned_cols=60  Identities=22%  Similarity=0.572  Sum_probs=57.5

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-ccCCCCeeec---cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      ++|.|..  |+ +.|.....|..|++ |++++||.|.   |++.|.+...|..|+++|+|++||.|.
T Consensus        89 ~~~~C~~~~C~-~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           89 KPFPCPFPGCG-KIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CSEECSCTTTC-CEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CcccCCcCCCC-CccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            7888988  99 99999999999999 9999999997   999999999999999999999999984

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=3.8e-22  Score=157.14  Aligned_cols=114  Identities=25%  Similarity=0.460  Sum_probs=88.6

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCcccccce
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ++++|.|.+|++.|.....|..|++.|.++++|.|.+          |++.|.  ..|..|++.|.              
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----------C~~~f~~~~~l~~H~~~~~--------------   59 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPK----------CGKCYFRKENLLEHEARNC--------------   59 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTT----------TCCBCSSHHHHHHHHHHCC--------------
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCC----------CCchhcCHHHHHHHHhhhh--------------
Confidence            4566777777777777777777777777777776643          366665  44555665432              


Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHh-hhcCCC
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVA-LFVGHT  326 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~-~H~gek  326 (335)
                        .+..+++|.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+...|..|++ .|.|++
T Consensus        60 --~~~~~~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           60 --MNRSEQVFTCSVCQ-ETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             --CCSCCCCEECSSSC-CEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             --cCCCCCCeECCCCC-CccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence              12334889999999 99999999999999 9999999999 9999999999999987 677764

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.87  E-value=1.4e-22  Score=162.27  Aligned_cols=96  Identities=20%  Similarity=0.282  Sum_probs=60.8

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCcccccc
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVKN  262 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~  262 (335)
                      .|+++|.|.+||+.|.....|..|+++|+++++|.|..          |++.|.  ..|..|+++|+++           
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~----------C~k~F~~~~~L~~H~~~H~~~-----------   76 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRY----------CEKVFPLAEYRTKHEIHHTGE-----------   76 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSS----------SSCEESSHHHHHHHHHHHHTC-----------
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCc----------cCeecccccchhhhccccCCC-----------
Confidence            47889999999999999999999999999885555532          244444  3344455444443           


Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCC------CCeeec-cCcccc
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD------SKWQCS-CGTTFS  310 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~------~~~~C~-C~~~F~  310 (335)
                              +||.|++|| +.|...+.|..|++ |+++      ++|.|. |++.|.
T Consensus        77 --------k~~~C~~C~-k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           77 --------RRYQCLACG-KSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             --------CCEEESSSC-CEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             --------ccccCCCCC-CCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence                    445555555 55555555555555 4433      235555 555554

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.86  E-value=1.9e-22  Score=159.16  Aligned_cols=111  Identities=28%  Similarity=0.487  Sum_probs=73.9

Q ss_pred             cceecc--cccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCcccccce
Q 042026          188 YTHYCQ--VCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       188 ~~~~C~--~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ++|.|+  .|++.|.+...|..|+++| ++++|.|.+          |++.|.  ..|..|+++|.++            
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~----------C~~~f~~~~~l~~H~~~h~~~------------   60 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE----------CGKAFVESSKLKRHQLVHTGE------------   60 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT----------TCCEESSHHHHHHHGGGTSCC------------
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC----------CCchhCCHHHHHHHHHHcCCC------------
Confidence            345555  4555555555555555555 444444432          244444  2333344443332            


Q ss_pred             eeeeeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCCCeee--c-cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          264 YKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQC--S-CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       264 ~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~C--~-C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                             ++|.|..  |+ +.|.....|..|++ |.++++|.|  . |++.|.+.+.|..|+++|++++++.
T Consensus        61 -------~~~~C~~~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~q  124 (124)
T 1ubd_C           61 -------KPFQCTFEGCG-KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ  124 (124)
T ss_dssp             -------CCEECCSTTCC-CEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC------
T ss_pred             -------CCeeCCCCCCc-CccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccCC
Confidence                   7788875  99 99999999999999 999999999  6 9999999999999999999999874

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=2.6e-21  Score=151.32  Aligned_cols=109  Identities=29%  Similarity=0.602  Sum_probs=83.0

Q ss_pred             CCcceeccc--ccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCccccc
Q 042026          186 AKYTHYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVK  261 (335)
Q Consensus       186 ~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k  261 (335)
                      ++++|.|.+  |++.|.....|..|++.|.++++|.|.+        ..|++.|.  ..|..|+++|.++          
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--------~~C~~~f~~~~~l~~H~~~h~~~----------   64 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDF--------KDCERRFSRSDQLKRHQRRHTGV----------   64 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCS--------TTCCCEESSHHHHHHHHHHHHCC----------
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCC--------CCCcCccCCHHHHHHHHHHcCCC----------
Confidence            445566665  6666666666666666666666665531        13456665  4455565555543          


Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee--c-cCccccCHHHHHHHHhhh
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC--S-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C--~-C~~~F~~~~~L~~H~~~H  322 (335)
                               ++|.|..|+ +.|.....|..|++ |+++++|.|  + |++.|.+...|..|+++|
T Consensus        65 ---------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           65 ---------KPFQCKTCQ-RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             ---------CCEECTTTC-CEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             ---------CCccCCccC-chhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence                     789999999 99999999999999 999999999  8 999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=3.7e-21  Score=157.64  Aligned_cols=110  Identities=25%  Similarity=0.407  Sum_probs=93.4

Q ss_pred             CCCCCC-----CCCCcCCCcchhHHHHHHhhcCCCcceeccc--ccccccCcHHHHHHHHHhcCCCcCcccccCCCccCC
Q 042026          158 ANIPVA-----ENGESFSEINGDIIEVDAVDLLAKYTHYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNG  230 (335)
Q Consensus       158 ~~~~c~-----~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~  230 (335)
                      ..+.|.     .|++.|.....|..|+..+.  ++++|.|.+  |++.|.+...|..|+++|.++++|.|.+.       
T Consensus        33 ~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~-------  103 (155)
T 2gli_A           33 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHT--GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHE-------  103 (155)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHH--CCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCST-------
T ss_pred             cceeCCCCCccchhhhhhhHHHHHHHHHhcC--CCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCC-------
Confidence            346665     44599999999999999887  678899986  99999999999999999999999998651       


Q ss_pred             CCcCchhh--hhhHHHH-HHhcCCCCCCCcccccceeeeeeCCcceeccc--CCCccCCCHHHHHHHHh-ccC
Q 042026          231 SSMGKTMS--LQSKLWN-KKHAKFQPLKSMICVKNHYKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       231 ~~c~~~f~--~~l~~h~-~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g  297 (335)
                       .|++.|.  ..|..|+ +.|+++                   ++|.|..  |+ +.|.....|+.|++ |+|
T Consensus       104 -~C~~~f~~~~~L~~H~~~~H~~~-------------------~~~~C~~~~C~-~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          104 -GCSKAFSNASDRAKHQNRTHSNE-------------------KPYVCKLPGCT-KRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             -TCCCEESSSSTTHHHHHHTTCSC-------------------CCEECCSTTTC-CEESSHHHHHHHHHHSCC
T ss_pred             -CCCCccCCHHHHHHHHHHhcCCC-------------------CCeeCCCCCCc-cccCCHHHHHHHHHhhcC
Confidence             3688887  6788887 677765                   7788988  99 99999999999999 765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=1.5e-20  Score=144.11  Aligned_cols=90  Identities=31%  Similarity=0.679  Sum_probs=85.1

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceee
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYK  265 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~  265 (335)
                      .+++|.|.+|++.|.....|..|++.|.++                                                  
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------------------   43 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDE--------------------------------------------------   43 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCS--------------------------------------------------
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCC--------------------------------------------------
Confidence            567899999999999999999999999887                                                  


Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                           ++|.|..|+ +.|.....|..|++ |.++++|.|. |++.|.+...|..|+++|++++||.+.
T Consensus        44 -----~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~~  105 (106)
T 2ee8_A           44 -----RPYTCDICH-KAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA  105 (106)
T ss_dssp             -----CCCBCSSSC-CBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCCC
T ss_pred             -----CCcCCCCcc-chhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcCC
Confidence                 788999999 99999999999999 9999999999 999999999999999999999999763

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=5.2e-20  Score=136.60  Aligned_cols=85  Identities=28%  Similarity=0.664  Sum_probs=77.9

Q ss_pred             Ccceecc--cccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          187 KYTHYCQ--VCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       187 ~~~~~C~--~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      +++|.|+  .|++.|.....|..|+++|.++                                                 
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~-------------------------------------------------   32 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ-------------------------------------------------   32 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCC-------------------------------------------------
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCC-------------------------------------------------
Confidence            5789998  6999999999999999999877                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                            ++|.|..|+ +.|.....|..|++ |.++++|.|+ |++.|.+.+.|..|+++|+|+++
T Consensus        33 ------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           33 ------KPFQCRICM-RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             ------CCEECTTTC-CEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             ------CCccCCCCC-cccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence                  789999999 99999999999999 9999999999 99999999999999999999874

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.81  E-value=1.8e-20  Score=150.00  Aligned_cols=102  Identities=15%  Similarity=0.081  Sum_probs=91.3

Q ss_pred             CCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchh
Q 042026          158 ANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTM  237 (335)
Q Consensus       158 ~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f  237 (335)
                      ..|.|+.|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|+++|+++++|.|..          |++.|
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~--~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~----------C~k~F   88 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHS--WEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLA----------CGKSF   88 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHH--CCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESS----------SCCEE
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcC--CCCCeeCCccCeecccccchhhhccccCCCccccCCC----------CCCCc
Confidence            34999999999999999999998876  7889999999999999999999999999999999964          58888


Q ss_pred             h--hhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCC
Q 042026          238 S--LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSV  285 (335)
Q Consensus       238 ~--~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~  285 (335)
                      .  ..|..|+++|++++|+.|             .++|+|..|+ +.|..
T Consensus        89 ~~~~~L~~H~~~hh~~~p~~~-------------~k~~~C~~C~-k~~~~  124 (133)
T 2lt7_A           89 INYQFMSSHIKSVHSQDPSGD-------------SKLYRLHPCR-SLQIR  124 (133)
T ss_dssp             SSHHHHHHHHHHHTCCCTTSS-------------SCCEEECCCC-SSCCC
T ss_pred             CCHHHHHHHhHHhcCCCCCCC-------------CCCeecCCCC-chhhh
Confidence            7  678889999999988765             3689999999 88864

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=5.2e-20  Score=138.34  Aligned_cols=90  Identities=30%  Similarity=0.574  Sum_probs=84.0

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|..|++.|.++                                                 
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------------------------------   34 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV-------------------------------------------------   34 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCC-------------------------------------------------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCC-------------------------------------------------
Confidence            3678899999999999999999999988876                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                            ++|.|..|+ +.|.....|..|++ |.++++|.|. |++.|.+...|..|+++|+|+++..+
T Consensus        35 ------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~~   95 (96)
T 2dmd_A           35 ------KPYKCKTCD-YAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS   95 (96)
T ss_dssp             ------CSEECSSSC-CEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCCC
T ss_pred             ------CCEeCCCCC-CccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCCC
Confidence                  789999999 99999999999999 9999999999 99999999999999999999987554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.79  E-value=1.3e-19  Score=131.96  Aligned_cols=80  Identities=36%  Similarity=0.823  Sum_probs=76.0

Q ss_pred             ceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeeeee
Q 042026          189 THYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSH  268 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~  268 (335)
                      +|.|.+|++.|.....|..|+++|.++                                                     
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------------------------------------   27 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDT-----------------------------------------------------   27 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTC-----------------------------------------------------
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCC-----------------------------------------------------
Confidence            589999999999999999999999877                                                     


Q ss_pred             CCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                        ++|.|..|+ +.|.....|..|++ |.++++|.|+ |++.|.+.+.|..|+++|+|
T Consensus        28 --~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           28 --RPYPCQYCG-KRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             --CCEECSSSC-CEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             --CCeeCCcCC-hhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence              789999999 99999999999999 9999999999 99999999999999999986

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.79  E-value=1.8e-19  Score=140.74  Aligned_cols=90  Identities=28%  Similarity=0.521  Sum_probs=75.9

Q ss_pred             cCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecc--cCCCccCCCHHH
Q 042026          213 GDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCK--RCNRKQFSVLSD  288 (335)
Q Consensus       213 ~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~--~C~~k~F~~~~~  288 (335)
                      .++++|.|.+        ..|++.|.  ..|..|+++|.++                   ++|.|.  .|+ +.|.....
T Consensus         2 ~~~~~~~C~~--------~~C~~~f~~~~~l~~H~~~h~~~-------------------~~~~C~~~~C~-~~f~~~~~   53 (119)
T 2jp9_A            2 SEKRPFMCAY--------PGCNKRYFKLSHLQMHSRKHTGE-------------------KPYQCDFKDCE-RRFSRSDQ   53 (119)
T ss_dssp             CSSCCBCCCS--------TTSCCCBSCHHHHHHHHHHHHTT-------------------CCEECCSTTCC-CEESSHHH
T ss_pred             CCCeeeeCCC--------CCCcchhCCHHHHHHHHHhhCCC-------------------CCccCCCCCCc-CccCCHHH
Confidence            3455666643        13677776  5566777777664                   678888  799 99999999


Q ss_pred             HHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          289 LRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       289 L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |..|++ |.++++|.|+ |++.|.+...|..|+++|+|++||.|
T Consensus        54 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   97 (119)
T 2jp9_A           54 LKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC   97 (119)
T ss_dssp             HHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEEC
T ss_pred             HHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeC
Confidence            999999 9999999999 99999999999999999999999999

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.1e-19  Score=138.08  Aligned_cols=91  Identities=21%  Similarity=0.312  Sum_probs=84.0

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|..|+++|  .                                                 
T Consensus        12 ~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~-------------------------------------------------   40 (107)
T 1wjp_A           12 ENKEVYQCRLCNAKLSSLLEQGSHERLC--R-------------------------------------------------   40 (107)
T ss_dssp             CCCCCCBCTTTCCBCSSHHHHHHHHHHH--H-------------------------------------------------
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHHC--C-------------------------------------------------
Confidence            3678899999999999999999999988  2                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHhccCCCCeeec-cCccccCHHHHHHHHh-hhcCCCCcccCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCS-CGTTFSRKDKLMGHVA-LFVGHTPAVNVNS  333 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~H~g~~~~~C~-C~~~F~~~~~L~~H~~-~H~gekp~~c~~~  333 (335)
                            ++|.|..|+ +.|.....|..|++|++++||.|. |++.|.+...|..|++ +|++++||.+...
T Consensus        41 ------~~~~C~~C~-~~f~~~~~l~~H~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~p  104 (107)
T 1wjp_A           41 ------NAAVCPYCS-LRFFSPELKQEHESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTSGP  104 (107)
T ss_dssp             ------HSBCCTTTC-CCBSSHHHHHHHHHHCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCCCS
T ss_pred             ------CCccCCCCC-CccCCHHHHHHHHHcCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCCCC
Confidence                  678999999 999999999999889999999999 9999999999999997 9999999998654

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.77  E-value=2.1e-19  Score=122.94  Aligned_cols=56  Identities=23%  Similarity=0.582  Sum_probs=54.0

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      ||||.|.+|| +.|...+.|..|++ |+|++||.|. ||++|.+.+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~-k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCG-KTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTC-CEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCC-CEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6999999999 99999999999999 9999999999 9999999999999999999985

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.5e-18  Score=130.04  Aligned_cols=86  Identities=33%  Similarity=0.653  Sum_probs=79.5

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|..|+++|.++                                                 
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-------------------------------------------------   33 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGE-------------------------------------------------   33 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSS-------------------------------------------------
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCC-------------------------------------------------
Confidence            3678899999999999999999999999877                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCC--CCeeec-cCccccCHHHHHHHHh-hhcCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD--SKWQCS-CGTTFSRKDKLMGHVA-LFVGHT  326 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~--~~~~C~-C~~~F~~~~~L~~H~~-~H~gek  326 (335)
                            ++|.|..|+ +.|.....|..|++ |.++  ++|.|. |++.|.+...|..|++ +|.|+.
T Consensus        34 ------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           34 ------KPYSCPVCG-LRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             ------CSEECSSSC-CEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             ------CCCcCCCCC-CccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCCC
Confidence                  789999999 99999999999999 9987  999999 9999999999999986 887753

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.74  E-value=6.4e-18  Score=132.72  Aligned_cols=110  Identities=22%  Similarity=0.319  Sum_probs=95.4

Q ss_pred             CCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHH---hcCCCcCcccccCCCccCCCCcC
Q 042026          158 ANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRA---HGDEYKTSAALTNPLKKNGSSMG  234 (335)
Q Consensus       158 ~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~---H~~~~~~~c~lc~~~~~~~~~c~  234 (335)
                      ..+.|+.|++.|.....|..|+..+.  ++++|.|.+|++.|.+...|..|++.   |.++.+|.|.+          |+
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~----------C~   73 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHT--GEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSV----------CQ   73 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHS--SCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS----------SC
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCC--CCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCC----------CC
Confidence            44999999999999999999998776  67889999999999999999999996   56777888854          58


Q ss_pred             chhh--hhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh--ccCCC
Q 042026          235 KTMS--LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDS  299 (335)
Q Consensus       235 ~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~  299 (335)
                      +.|.  ..|..|+++|+++                   ++|.|..|+ +.|.....|+.|++  |.++.
T Consensus        74 ~~f~~~~~l~~H~~~h~~~-------------------~~~~C~~C~-~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           74 ETFRRRMELRLHMVSHTGE-------------------MPYKCSSCS-QQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             CEESSHHHHHHHHHHHSSS-------------------CSEECSSSC-CEESSHHHHHHHHHHTSSCSS
T ss_pred             CccCCHHHHHHHHHHcCCC-------------------CCccCCCcc-chhCCHHHHHHHHHHHCCCCC
Confidence            8887  5677788888765                   778999999 99999999999997  87764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.74  E-value=3.5e-18  Score=134.47  Aligned_cols=78  Identities=32%  Similarity=0.596  Sum_probs=69.9

Q ss_pred             CcCchhh--hhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec---c
Q 042026          232 SMGKTMS--LQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS---C  305 (335)
Q Consensus       232 ~c~~~f~--~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~---C  305 (335)
                      .|++.|.  ..|..|+++| +                   +++|.|..|+ +.|.....|..|++ |.++++|.|.   |
T Consensus        12 ~C~~~f~~~~~l~~H~~~h-~-------------------~~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   70 (124)
T 1ubd_C           12 GCTKMFRDNSAMRKHLHTH-G-------------------PRVHVCAECG-KAFVESSKLKRHQLVHTGEKPFQCTFEGC   70 (124)
T ss_dssp             TCCCEESSHHHHHHHHGGG-S-------------------CCCEECTTTC-CEESSHHHHHHHGGGTSCCCCEECCSTTC
T ss_pred             CCcCccCCHHHHHHHHHHc-C-------------------CCCeECCCCC-chhCCHHHHHHHHHHcCCCCCeeCCCCCC
Confidence            5788887  4566677766 3                   3789999999 99999999999999 9999999994   9


Q ss_pred             CccccCHHHHHHHHhhhcCCCCccc
Q 042026          306 GTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       306 ~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      ++.|.+...|..|+++|+|++||.|
T Consensus        71 ~~~f~~~~~l~~H~~~h~~~~~~~C   95 (124)
T 1ubd_C           71 GKRFSLDFNLRTHVRIHTGDRPYVC   95 (124)
T ss_dssp             CCEESCHHHHHHHHHHHHCCCCCCC
T ss_pred             cCccCCHHHHHHHHHHhCCCCceEC
Confidence            9999999999999999999999999

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.9e-18  Score=131.47  Aligned_cols=83  Identities=29%  Similarity=0.546  Sum_probs=78.6

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.| .|++.|.....|..|++.|.++                                                 
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~-------------------------------------------------   35 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGL-------------------------------------------------   35 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCC-------------------------------------------------
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCC-------------------------------------------------
Confidence            47889999 9999999999999999999877                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                            ++|.|..|+ +.|.....|..|++ |.++++|.|. |++.|.+...|..|+++|++
T Consensus        36 ------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           36 ------RPYGCGVCG-KKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             ------CSEECTTTS-CEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHHHHH
T ss_pred             ------cCccCCCCC-cccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHHccc
Confidence                  789999999 99999999999999 9999999999 99999999999999999964

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.72  E-value=1.4e-17  Score=125.86  Aligned_cols=83  Identities=34%  Similarity=0.745  Sum_probs=77.5

Q ss_pred             CCcceeccc--ccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccce
Q 042026          186 AKYTHYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       186 ~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ..++|.|.+  |++.|.....|..|++.|.++                                                
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------------------------------------------------   43 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGE------------------------------------------------   43 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCC------------------------------------------------
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCC------------------------------------------------
Confidence            567799997  999999999999999999887                                                


Q ss_pred             eeeeeCCcceecc--cCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          264 YKRSHCPKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       264 ~~~h~~~k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                             ++|.|.  .|+ +.|.....|..|++ |+++++|.|. |++.|.+...|..|+++|+|
T Consensus        44 -------~~~~C~~~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           44 -------KPYKCTWEGCD-WRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             -------CCEECCSSSCC-CEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             -------CCeeCCCCCCC-CccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence                   788886  699 99999999999999 9999999999 99999999999999999975

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=7.4e-19  Score=136.67  Aligned_cols=101  Identities=15%  Similarity=0.210  Sum_probs=82.6

Q ss_pred             chhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHH--hcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcC
Q 042026          173 NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRA--HGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAK  250 (335)
Q Consensus       173 ~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~--H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~  250 (335)
                      ..|..|+..+.  ++++|.|.+|++.|.....|..|++.  |.+.+                                  
T Consensus         5 ~~l~~H~~~H~--~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~----------------------------------   48 (115)
T 2dmi_A            5 SSGKLYGSIFT--GASKFRCKDCSAAYDTLVELTVHMNETGHYRDD----------------------------------   48 (115)
T ss_dssp             CCCCCCCCCCC--CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCS----------------------------------
T ss_pred             hhhhhheeeeC--CCCCEECCccCchhcCHHHHHHHHHHhCccccC----------------------------------
Confidence            34445554433  77889999999999999999999988  43331                                  


Q ss_pred             CCCCCCcccccceeeeeeCCcceecccCCCccC--CCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          251 FQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQF--SVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       251 ~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F--~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                                          ..+.|..|+ +.|  .....|..|++ |++++||.|+ |++.|.+...|..|+++|+...
T Consensus        49 --------------------~~~~C~~C~-~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           49 --------------------NHETDNNNP-KRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             --------------------CCCCCCCCC-SCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred             --------------------CCccCCCCC-cccccccHHHHHHHhhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence                                234599999 999  89999999999 9999999999 9999999999999999998776


Q ss_pred             Cccc
Q 042026          327 PAVN  330 (335)
Q Consensus       327 p~~c  330 (335)
                      ...+
T Consensus       108 ~~~~  111 (115)
T 2dmi_A          108 KVSG  111 (115)
T ss_dssp             CSCC
T ss_pred             cCCC
Confidence            5544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.72  E-value=1.1e-17  Score=136.83  Aligned_cols=98  Identities=23%  Similarity=0.406  Sum_probs=86.3

Q ss_pred             CCcceecccccccccCcHHHHHHHHH-hcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRA-HGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~-H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      +...|.|.+|++.|.+...|..|++. |.+..+.....|                                         
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-----------------------------------------   60 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-----------------------------------------   60 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-----------------------------------------
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-----------------------------------------
Confidence            45679999999999999999999998 776643222111                                         


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec---cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                            +.|.|..|+ +.|.....|..|++ |.++++|.|.   |++.|.+...|..|+++|++++||.|.
T Consensus        61 ------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~  124 (155)
T 2rpc_A           61 ------YWEECPREG-KSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCE  124 (155)
T ss_dssp             ------CBTTCTTSS-CCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCS
T ss_pred             ------cccCCCCcc-cccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCC
Confidence                  568999999 99999999999999 9999999996   999999999999999999999999994

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.70  E-value=1.6e-17  Score=122.70  Aligned_cols=82  Identities=35%  Similarity=0.748  Sum_probs=75.7

Q ss_pred             CCcceeccc--ccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccce
Q 042026          186 AKYTHYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       186 ~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ...+|.|.+  |++.|.....|..|++.|.++                                                
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------------------------------------------------   33 (89)
T 2wbs_A            2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGE------------------------------------------------   33 (89)
T ss_dssp             -CCCEECCSTTTCCEESSHHHHHHHHTTSCSS------------------------------------------------
T ss_pred             CCCCeeCCCCCCCCcCCCHHHHHHHHHhcCCC------------------------------------------------
Confidence            346799999  999999999999999988877                                                


Q ss_pred             eeeeeCCcceecc--cCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhc
Q 042026          264 YKRSHCPKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       264 ~~~h~~~k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                             ++|.|.  .|+ +.|.....|..|++ |+++++|.|+ |++.|.+.+.|..|+++|.
T Consensus        34 -------~~~~C~~~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           34 -------KPYHCDWDGCG-WKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             -------CCEECCSTTTC-CEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             -------CCcCCCCCCCC-CccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence                   788887  599 99999999999999 9999999999 9999999999999999984

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.8e-17  Score=117.62  Aligned_cols=65  Identities=32%  Similarity=0.756  Sum_probs=61.9

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      ..+.++++|.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+...|..|+++|+|++||.|
T Consensus        11 ~~~~~~~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECG-KSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSC-CBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCC-cccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            455677999999999 99999999999999 9999999999 99999999999999999999999998

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.66  E-value=8.1e-17  Score=109.99  Aligned_cols=57  Identities=30%  Similarity=0.586  Sum_probs=53.8

Q ss_pred             CcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeee
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKR  266 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~  266 (335)
                      ++||.|.+||+.|...+.|..|+++|+++                                                   
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~e---------------------------------------------------   30 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGY---------------------------------------------------   30 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTC---------------------------------------------------
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCC---------------------------------------------------
Confidence            68999999999999999999999999998                                                   


Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                          |||.|.+|| +.|...+.|+.|++ |+|++
T Consensus        31 ----kp~~C~~C~-k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C           31 ----RPRSCPECG-KCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             ----CCEECTTTC-CEESSHHHHHHHGGGGSCC-
T ss_pred             ----cCeECCCCC-CCcCCHHHHHHHhCccCCCC
Confidence                899999999 99999999999999 99975

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=1.3e-17  Score=123.34  Aligned_cols=81  Identities=22%  Similarity=0.423  Sum_probs=74.7

Q ss_pred             CcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeee
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKR  266 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~  266 (335)
                      +++|.|.+|++.|.....|..|+++|.++                                                   
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~---------------------------------------------------   29 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGE---------------------------------------------------   29 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCC---------------------------------------------------
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCC---------------------------------------------------
Confidence            46899999999999999999999999887                                                   


Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                          ++|.|..|+ +.|.....|..|++ |.+ .+|.|. |++.|.....|..|++.+++
T Consensus        30 ----~~~~C~~C~-k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C           30 ----KPFACDICG-RKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             ----CCEECTTTC-CEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----CCccCCCCC-CccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence                889999999 99999999999999 764 889999 99999999999999987653

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=3e-16  Score=119.88  Aligned_cols=89  Identities=25%  Similarity=0.424  Sum_probs=80.4

Q ss_pred             CCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCch
Q 042026          157 NANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKT  236 (335)
Q Consensus       157 ~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~  236 (335)
                      ...+.|..|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|+++|.++                     
T Consensus        15 ~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------   71 (106)
T 2ee8_A           15 KKEFICKFCGRHFTKSYNLLIHERTHT--DERPYTCDICHKAFRRQDHLRDHRYIHSKE---------------------   71 (106)
T ss_dssp             CCCCBCSSSCCBCSSHHHHHHHHHHHC--CSCCCBCSSSCCBCSCHHHHHHHGGGSCCC---------------------
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHHcC--CCCCcCCCCccchhCCHHHHHHHHHHhCCC---------------------
Confidence            445999999999999999999998876  678899999999999999999999999877                     


Q ss_pred             hhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          237 MSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       237 f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                                                        ++|.|..|+ +.|.....|..|++ |.+++||.+
T Consensus        72 ----------------------------------~~~~C~~C~-~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           72 ----------------------------------KPFKCQECG-KGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             ----------------------------------CTTSCSSSC-CCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             ----------------------------------CCeECCCcC-CcccCHHHHHHHHHHhCCCCCCcC
Confidence                                              778888899 99999999999999 999998864

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=1.7e-16  Score=113.24  Aligned_cols=62  Identities=32%  Similarity=0.773  Sum_probs=58.8

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCc
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPA  328 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~  328 (335)
                      .+.++++|.|..|+ +.|.....|..|++ |+++++|.|. |++.|.+...|.+|+++|+|++||
T Consensus        11 ~~~~~~~~~C~~C~-k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQ-ASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSS-CCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCC-ceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            34567899999999 99999999999999 9999999999 999999999999999999999997

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=3.5e-16  Score=118.75  Aligned_cols=63  Identities=25%  Similarity=0.349  Sum_probs=59.2

Q ss_pred             eCCcceecccCCCccCCCHHHHHHHHh--c---cCCCCeeec-cCccccCHHHHHHH-HhhhcCCCCcccC
Q 042026          268 HCPKMYVCKRCNRKQFSVLSDLRTHEK--H---CGDSKWQCS-CGTTFSRKDKLMGH-VALFVGHTPAVNV  331 (335)
Q Consensus       268 ~~~k~y~C~~C~~k~F~~~~~L~~H~~--H---~g~~~~~C~-C~~~F~~~~~L~~H-~~~H~gekp~~c~  331 (335)
                      .+++||.|..|| +.|...+.|..|++  |   ++++||.|. ||+.|.+++.|..| +++|+|++||.|.
T Consensus        14 ~gekpy~C~~Cg-k~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           14 KVEGGYECKYCT-FQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCSSEECSSCS-CEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCcCcCCCCCC-CccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            467999999999 99999999999996  8   678999999 99999999999999 8999999999984

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=8.9e-16  Score=108.24  Aligned_cols=64  Identities=25%  Similarity=0.521  Sum_probs=60.1

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      .|.++++|.|..|+ +.|.....|+.|++ |+++++|.|. |++.|.+...|..|+++|++++|...
T Consensus         3 s~~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p~   68 (70)
T 1x5w_A            3 SGSSGHPEKCSECS-YSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS   68 (70)
T ss_dssp             SCCCCCSEECSSSS-CEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCSS
T ss_pred             CCCCCCCeECCCCC-cccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCCC
Confidence            35677999999999 99999999999999 9999999999 99999999999999999999998753

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.4e-15  Score=113.85  Aligned_cols=87  Identities=23%  Similarity=0.347  Sum_probs=79.1

Q ss_pred             CCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCch
Q 042026          157 NANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKT  236 (335)
Q Consensus       157 ~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~  236 (335)
                      +..+.|..|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|+++|.++                     
T Consensus         6 ~~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------   62 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKLKTHMRCHT--GVKPYKCKTCDYAAADSSSLNKHLRIHSDE---------------------   62 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHHHHHGGGCC--CCCSEECSSSCCEESSHHHHHHHHHHSCCC---------------------
T ss_pred             CcCeECCCCCCccCCHHHHHHHHHhcC--CCCCEeCCCCCCccCCHHHHHHHHHHhCCC---------------------
Confidence            345999999999999999999998765  678899999999999999999999999877                     


Q ss_pred             hhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCe
Q 042026          237 MSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW  301 (335)
Q Consensus       237 f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~  301 (335)
                                                        ++|.|..|+ +.|.....|..|++ |+++++.
T Consensus        63 ----------------------------------~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           63 ----------------------------------RPFKCQICP-YASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             ----------------------------------CCEECSSSS-CEESSHHHHHHHHTTCCSCCCC
T ss_pred             ----------------------------------CCccCCCCC-CccCCHHHHHHHHHHhcCCCCC
Confidence                                              789999999 99999999999999 9988753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.1e-15  Score=112.02  Aligned_cols=72  Identities=28%  Similarity=0.472  Sum_probs=66.2

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCC----CCeeec-cCccccCHHHHHHHHhhhcCCCCcccCCC
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD----SKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVNS  333 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~----~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~~  333 (335)
                      ++|+++|+++++|.|..|+ +.|.....|..|++ |.+.    ++|.|. |++.|.+...|..|+++|++++++.|...
T Consensus         4 ~~H~~~H~~~k~~~C~~C~-~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCD-KTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSS-CEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             ccccceecCCCCCcCCCCC-CccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            5688899999999999999 99999999999998 6654    799999 99999999999999999999999998653

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=2.2e-16  Score=119.32  Aligned_cols=66  Identities=23%  Similarity=0.321  Sum_probs=58.9

Q ss_pred             eeeeCCcceecccCCCccCC-CHHHHHHHHh-ccC-CCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          265 KRSHCPKMYVCKRCNRKQFS-VLSDLRTHEK-HCG-DSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~-~~~~L~~H~~-H~g-~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      ++|.++++|.|..|+ +.|. ....|+.|++ |++ +++|.|. |++.|.++..|.+|+++|++++|+...
T Consensus        17 ~~h~~~~~~~C~~C~-k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           17 RAIHERGEAVCPTCN-VVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             HTTTTTSCCCCTTTC-CCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             HHhccCCCcCCCCCC-CChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            333344888999999 9999 9999999999 998 9999999 999999999999999999999997653

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.8e-15  Score=115.84  Aligned_cols=90  Identities=14%  Similarity=0.145  Sum_probs=80.6

Q ss_pred             ccCCCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCc
Q 042026          154 YINNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSM  233 (335)
Q Consensus       154 ~~~~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c  233 (335)
                      ...+..+.|..|++.|.....|..|+..+.    ++|.|.+|++.|.....|..|++ |.++                  
T Consensus        11 h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~----~~~~C~~C~~~f~~~~~l~~H~~-H~~~------------------   67 (107)
T 1wjp_A           11 VENKEVYQCRLCNAKLSSLLEQGSHERLCR----NAAVCPYCSLRFFSPELKQEHES-KCEY------------------   67 (107)
T ss_dssp             CCCCCCCBCTTTCCBCSSHHHHHHHHHHHH----HSBCCTTTCCCBSSHHHHHHHHH-HCST------------------
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHCC----CCccCCCCCCccCCHHHHHHHHH-cCCC------------------
Confidence            334456999999999999999999998863    68999999999999999999996 8877                  


Q ss_pred             CchhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh--ccCCCCeeec
Q 042026          234 GKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSKWQCS  304 (335)
Q Consensus       234 ~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~~~C~  304 (335)
                                                           ++|.|..|+ +.|.....|+.|++  |+++++|.|.
T Consensus        68 -------------------------------------~~~~C~~C~-~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           68 -------------------------------------KKLTCLECM-RTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             -------------------------------------GGGEEGGGT-EECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             -------------------------------------CCccCcccc-chhCCHHHHHHHHHHHcCCCCCCCCC
Confidence                                                 888999999 99999999999996  9999999885

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.60  E-value=1.6e-15  Score=112.12  Aligned_cols=84  Identities=21%  Similarity=0.471  Sum_probs=75.5

Q ss_pred             CCCCC--CCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCch
Q 042026          159 NIPVA--ENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKT  236 (335)
Q Consensus       159 ~~~c~--~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~  236 (335)
                      .|.|+  .|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|+++|.++                     
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------   60 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLTRHIRIHT--GQKPFQCRICMRNFSRSDHLTTHIRTHTGE---------------------   60 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHHHHHHHHH--CCCCEECTTTCCEESCHHHHHHHHHHHHCC---------------------
T ss_pred             ceECCCCCCCCccCCHHHHHHHHHHhC--CCCCccCCCCCcccCCHHHHHHHHHHcCCC---------------------
Confidence            48897  69999999999999999876  678899999999999999999999999887                     


Q ss_pred             hhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCC
Q 042026          237 MSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSK  300 (335)
Q Consensus       237 f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~  300 (335)
                                                        ++|.|..|+ +.|.....|..|++ |+|+++
T Consensus        61 ----------------------------------~~~~C~~C~-~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           61 ----------------------------------KPFACDICG-RKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             ----------------------------------CCEECTTTC-CEESSHHHHHHHHGGGGC---
T ss_pred             ----------------------------------CCccCCCCC-chhCCHHHHHHHHHHhcccCC
Confidence                                              789999999 99999999999999 998763

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=108.43  Aligned_cols=64  Identities=30%  Similarity=0.572  Sum_probs=59.9

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      +.++|.++++|.|..|+ +.|.....|+.|++ |.+++||.|. |++.|.+...|..|+++|+++.+
T Consensus         5 ~~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~   70 (72)
T 1x6e_A            5 SSGIHSGEKPYGCVECG-KAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPS   70 (72)
T ss_dssp             CCCTTTTCCCEECSSSC-CEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSSS
T ss_pred             CCcccCCCCCccCCCCC-CccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            45678888999999999 99999999999999 9999999999 99999999999999999998754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.59  E-value=1.4e-15  Score=110.29  Aligned_cols=80  Identities=30%  Similarity=0.465  Sum_probs=74.0

Q ss_pred             CCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhh
Q 042026          160 IPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSL  239 (335)
Q Consensus       160 ~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~  239 (335)
                      +.|..|++.|.....|..|+..+.  ++++|.|..|++.|.....|..|++.|.++                        
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~------------------------   55 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHS--DTRPYPCQYCGKRFHQKSDMKKHTFIHTGE------------------------   55 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH--TCCCEECSSSCCEESSHHHHHHHHHHHHTC------------------------
T ss_pred             ccCCCCcccccCchhHHHHHHHcC--CCCCeeCCcCChhhCCHHHHHHHHHHhcCC------------------------
Confidence            679999999999999999999876  778899999999999999999999999887                        


Q ss_pred             hhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          240 QSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       240 ~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                                                     ++|.|..|+ +.|.....|..|++ |+|
T Consensus        56 -------------------------------~~~~C~~C~-~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           56 -------------------------------KPHKCQVCG-KAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             -------------------------------CCEECTTTS-CEESSHHHHHHHHHHHC-
T ss_pred             -------------------------------CCCcCCCcc-hhhCChHHHHHHHHhhCC
Confidence                                           789999999 99999999999999 875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.58  E-value=1.9e-15  Score=108.94  Aligned_cols=69  Identities=26%  Similarity=0.581  Sum_probs=60.7

Q ss_pred             CCcceeccc--ccccccCcHHHHHHHH-HhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccc
Q 042026          186 AKYTHYCQV--CGKGFKRDANLRMHMR-AHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKN  262 (335)
Q Consensus       186 ~~~~~~C~~--C~k~f~~~~~L~~H~r-~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~  262 (335)
                      ++++|.|..  |++.|.+...|..|++ .|.++                                               
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~-----------------------------------------------   36 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ-----------------------------------------------   36 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSC-----------------------------------------------
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCC-----------------------------------------------
Confidence            567788887  9999999999999998 68776                                               


Q ss_pred             eeeeeeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCCCeeec-cCcccc
Q 042026          263 HYKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFS  310 (335)
Q Consensus       263 h~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~  310 (335)
                              ++|.|..  |+ +.|.....|+.|++ |++++||.|. |+++|.
T Consensus        37 --------~~~~C~~~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A           37 --------KSFSCPEPACG-KSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             --------CCEECSCTTTC-CEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             --------CCeECCCCCCc-CccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence                    7888888  99 99999999999999 9999999999 999884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.58  E-value=2.7e-15  Score=109.44  Aligned_cols=76  Identities=36%  Similarity=0.692  Sum_probs=70.7

Q ss_pred             ceec--ccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeee
Q 042026          189 THYC--QVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKR  266 (335)
Q Consensus       189 ~~~C--~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~  266 (335)
                      +|.|  ..|++.|.....|..|+++|.++                                                   
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~---------------------------------------------------   29 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQ---------------------------------------------------   29 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTT---------------------------------------------------
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCC---------------------------------------------------
Confidence            5899  99999999999999999999887                                                   


Q ss_pred             eeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCCCeeec----cCccccCHHHHHHHHhhhc
Q 042026          267 SHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQCS----CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       267 h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~C~----C~~~F~~~~~L~~H~~~H~  323 (335)
                          ++|.|+.  |+ +.|.....|..|++ |++   |.|.    |++.|.+...|..|+++|+
T Consensus        30 ----~~~~C~~~~C~-~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           30 ----LPYECPHEGCD-KRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             ----CCEECCSTTCC-CEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             ----CCeeCCCCCCc-CccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence                7899988  99 99999999999999 998   9984    9999999999999999885

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.5e-15  Score=112.20  Aligned_cols=57  Identities=18%  Similarity=0.352  Sum_probs=52.7

Q ss_pred             cceecccCCCccC-CCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHH-HhhhcCCCCccc
Q 042026          271 KMYVCKRCNRKQF-SVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGH-VALFVGHTPAVN  330 (335)
Q Consensus       271 k~y~C~~C~~k~F-~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H-~~~H~gekp~~c  330 (335)
                      ++|.|..|+ +.| .....|+.|++ | +++||.|. ||+.|.+++.|..| +++|+++ ||..
T Consensus        33 ~~~~C~~C~-k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~-p~~~   93 (96)
T 2ctd_A           33 GSVSCPTCQ-AVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL-PSGP   93 (96)
T ss_dssp             SCEECTTTC-SCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC-SSCS
T ss_pred             CCcCCCCCC-CCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC-CCCC
Confidence            889999999 999 99999999999 9 99999999 99999999999999 9999865 5543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.55  E-value=3.9e-15  Score=109.04  Aligned_cols=62  Identities=18%  Similarity=0.356  Sum_probs=56.6

Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHH-hhhcCCC
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHV-ALFVGHT  326 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~-~~H~gek  326 (335)
                      +..+...++|.|++|| +.|.....|++|++ |++++||.|. |+++|.+++.|.+|+ ++|++|+
T Consensus        20 ~~~~~~~~~h~C~~Cg-k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCPVCG-ESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECTTSC-CEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECCCCC-CCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            4455667899999999 99999999999999 9999999999 999999999999996 6898875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.53  E-value=7.9e-15  Score=98.75  Aligned_cols=55  Identities=24%  Similarity=0.417  Sum_probs=49.2

Q ss_pred             CCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      ++++|.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+...|..|+++|++
T Consensus         1 g~~~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCG-KFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTC-CBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCc-chhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            35899999999 99999999999999 9999999999 99999999999999999975

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.3e-14  Score=104.20  Aligned_cols=67  Identities=24%  Similarity=0.462  Sum_probs=59.9

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHh--ccCC-CCeeec-cCccccCHHHHHHHHhhhcC-CCCc
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGD-SKWQCS-CGTTFSRKDKLMGHVALFVG-HTPA  328 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~-~~~~C~-C~~~F~~~~~L~~H~~~H~g-ekp~  328 (335)
                      .+|+++|+++++|.|.+|+ +.|.....|..|++  |.++ ++|.|+ |++.|.+...|..|+++|++ +.|.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p~   75 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICH-ARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS   75 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTC-CEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCCC
T ss_pred             CccccccCCCCCeECCCcC-chhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            4789999999999999999 99999999999996  7775 899999 99999999999999997654 4453

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.3e-14  Score=100.79  Aligned_cols=59  Identities=25%  Similarity=0.541  Sum_probs=55.6

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh--c-cCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--H-CGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H-~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      ++|.++++|.|..|+ +.|.....|..|++  | .+++||.|+ |++.|.+.+.|..|+++|+|
T Consensus         3 ~~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCS-RVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTC-CEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCc-chhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            578889999999999 99999999999998  6 689999999 99999999999999999986

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.7e-14  Score=106.58  Aligned_cols=86  Identities=29%  Similarity=0.504  Sum_probs=76.3

Q ss_pred             CCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchh
Q 042026          158 ANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTM  237 (335)
Q Consensus       158 ~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f  237 (335)
                      ..+.|..|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|++.|.++.                     
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~---------------------   62 (95)
T 2yt9_A            6 SGVACEICGKIFRDVYHLNRHKLSHS--GEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV---------------------   62 (95)
T ss_dssp             SCEECSSSCCEESSSHHHHHHHHHSC--SSCSEECSSSCCEESCHHHHHHHHHHHCCCC---------------------
T ss_pred             CCeECCCCCCccCChHHHHHHHHhcC--CCCCCcCCCCCCccCCHHHHHHHHHHhcCCC---------------------
Confidence            44899999999999999999998765  7788999999999999999999999998751                     


Q ss_pred             hhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh--ccCCC
Q 042026          238 SLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDS  299 (335)
Q Consensus       238 ~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~  299 (335)
                                                      +++|.|..|+ +.|.....|..|++  |.++.
T Consensus        63 --------------------------------~~~~~C~~C~-~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           63 --------------------------------GKPYICQSCG-KGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             --------------------------------CSSBCCSSSC-CCBSSHHHHHHHHHHTSCCCS
T ss_pred             --------------------------------CCceECCCcc-chhCCHHHHHHHHHHhcCCCC
Confidence                                            1788999999 99999999999986  87753

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=1e-14  Score=104.75  Aligned_cols=62  Identities=34%  Similarity=0.623  Sum_probs=58.0

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceee
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYK  265 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~  265 (335)
                      ++++|.|.+|++.|.....|..|+++|.++                                                  
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------------------------------------   44 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLSKHRRTHTGE--------------------------------------------------   44 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHHHHHTTTCCS--------------------------------------------------
T ss_pred             CCCCEECCCCCcccCCHHHHHHHHHHcCCC--------------------------------------------------
Confidence            567899999999999999999999999877                                                  


Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                           ++|.|..|+ +.|.....|..|++ |++++||.|
T Consensus        45 -----~~~~C~~C~-~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           45 -----KPYKCDECG-KAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             -----CSEECSSSC-CEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             -----cCeeCCCCC-CccCCHHHHHHHHHHhCCCCCCCC
Confidence                 889999999 99999999999999 999999988

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.51  E-value=1.4e-14  Score=97.47  Aligned_cols=54  Identities=24%  Similarity=0.540  Sum_probs=52.4

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      ||.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+.+.|..|+++|++++
T Consensus         1 p~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECG-IRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTC-CBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCc-CcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999 99999999999999 9999999999 9999999999999999999886

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.7e-14  Score=103.80  Aligned_cols=65  Identities=20%  Similarity=0.362  Sum_probs=58.8

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccC---CCCeeec-cCccccCHHHHHHHH-hhhcCCCCcccC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG---DSKWQCS-CGTTFSRKDKLMGHV-ALFVGHTPAVNV  331 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g---~~~~~C~-C~~~F~~~~~L~~H~-~~H~gekp~~c~  331 (335)
                      .|+++++|.|.+|+ +.|.....|..|++ |.+   +++|.|. |++.|.+...|..|+ +.|.+++|....
T Consensus         1 ~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            1 GSSGSSGLQCEICG-FTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCSCCCEECSSSC-CEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCCcCeECCCCC-CeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            36778999999999 99999999999999 986   8999999 999999999999998 678888877654

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.50  E-value=6.1e-14  Score=105.55  Aligned_cols=85  Identities=21%  Similarity=0.291  Sum_probs=75.1

Q ss_pred             cCCCCCCCCC--CCCcCCCcchhHHHHHHhhcCCCcceecc--cccccccCcHHHHHHHHHhcCCCcCcccccCCCccCC
Q 042026          155 INNANIPVAE--NGESFSEINGDIIEVDAVDLLAKYTHYCQ--VCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNG  230 (335)
Q Consensus       155 ~~~~~~~c~~--c~~~~~~~~~~~~h~~~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~  230 (335)
                      .....+.|..  |++.|.....|..|+..+.  ++++|.|.  .|++.|.....|..|+++|.++               
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---------------   73 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHT--GEKPYKCTWEGCDWRFARSDELTRHYRKHTGA---------------   73 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHS--CCCCEECCSSSCCCEESSHHHHHHHHHHHTSC---------------
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhC--CCCCeeCCCCCCCCccCCHHHHHHHHHHhCCC---------------
Confidence            3444588985  9999999999999999765  77889996  6999999999999999999887               


Q ss_pred             CCcCchhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          231 SSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       231 ~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                                                              ++|.|..|+ +.|.....|..|++ |++
T Consensus        74 ----------------------------------------~~~~C~~C~-~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           74 ----------------------------------------KPFQCGVCN-RSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             ----------------------------------------CSCBCSSSC-CBCSSHHHHHHHHHHHCC
T ss_pred             ----------------------------------------CCeECCCCc-CccCCHHHHHHHHHHhCC
Confidence                                                    788899999 99999999999999 864

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.50  E-value=8.3e-15  Score=116.00  Aligned_cols=52  Identities=25%  Similarity=0.493  Sum_probs=50.4

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      +||.|..|| +.|.....|+.|++ |  ++||.|+ |++.|.+.+.|..|+++|+|.
T Consensus        73 ~~~~C~~C~-k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           73 SQFVCPLCL-MPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             CSEECTTTC-CEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCeECCCCC-cccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            889999999 99999999999999 9  8999999 999999999999999999986

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=1.9e-14  Score=109.10  Aligned_cols=71  Identities=20%  Similarity=0.284  Sum_probs=60.9

Q ss_pred             cCCCcceecccccccccCcHHHHHHHH-HhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccc
Q 042026          184 LLAKYTHYCQVCGKGFKRDANLRMHMR-AHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKN  262 (335)
Q Consensus       184 ~~~~~~~~C~~C~k~f~~~~~L~~H~r-~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~  262 (335)
                      ..++++|.|.+||+.|.....|..|++ .|.+.                                               
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~-----------------------------------------------   45 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNV-----------------------------------------------   45 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSC-----------------------------------------------
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCC-----------------------------------------------
Confidence            357889999999999999999999998 48431                                               


Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHH-Hh-ccCCCCeeec-cCc
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTH-EK-HCGDSKWQCS-CGT  307 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H-~~-H~g~~~~~C~-C~~  307 (335)
                           .+++||.|..|| +.|...+.|..| ++ |+|++||.|. +..
T Consensus        46 -----~~ekpf~C~~Cg-k~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           46 -----VLNSSYVCVECN-FLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             -----CCSCCEEETTTT-EEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             -----CCCCCcCCCCCC-cccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence                 011889999999 999999999999 78 9999999998 653

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.49  E-value=3.1e-14  Score=101.33  Aligned_cols=61  Identities=31%  Similarity=0.637  Sum_probs=55.2

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|..|+++|.++                                                 
T Consensus        13 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~-------------------------------------------------   43 (74)
T 2lce_A           13 HSDKPYKCDRCQASFRYKGNLASHKTVHTGE-------------------------------------------------   43 (74)
T ss_dssp             CCCCSBCCTTSSCCBSCHHHHHHHHHHHCCC-------------------------------------------------
T ss_pred             CCCCCeECCCCCceeCCHHHHHHHHHHcCCC-------------------------------------------------
Confidence            4677899999999999999999999999887                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCe
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW  301 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~  301 (335)
                            ++|.|..|+ +.|.....|++|++ |++++||
T Consensus        44 ------~~~~C~~C~-k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           44 ------KPYRCNICG-AQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             ------CSEECTTTC-CEESCHHHHHHHHHHHCCSCCC
T ss_pred             ------CCEECCCCC-chhCCHHHHHHHHHhcCCCCCC
Confidence                  788899999 99999999999999 9999886

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=3.9e-14  Score=108.77  Aligned_cols=82  Identities=27%  Similarity=0.400  Sum_probs=74.6

Q ss_pred             CCCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCc
Q 042026          156 NNANIPVAENGESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGK  235 (335)
Q Consensus       156 ~~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~  235 (335)
                      .+..|.| .|++.|.....|..|+..+.  ++++|.|.+|++.|.....|..|+++|.++                    
T Consensus         7 ~~k~~~C-~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--------------------   63 (110)
T 2csh_A            7 GDKLYPC-QCGKSFTHKSQRDRHMSMHL--GLRPYGCGVCGKKFKMKHHLVGHMKIHTGI--------------------   63 (110)
T ss_dssp             CCCCEEC-TTSCEESSHHHHHHHHHHHS--CCCSEECTTTSCEESSSHHHHHHHTTTCCC--------------------
T ss_pred             CCCCEec-cCCCccCCHHHHHHHHHHcC--CCcCccCCCCCcccCCHHHHHHHHHHcCCC--------------------
Confidence            3455999 99999999999999999876  678899999999999999999999998877                    


Q ss_pred             hhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          236 TMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       236 ~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                                                         ++|.|..|+ +.|.....|..|++ |.
T Consensus        64 -----------------------------------~~~~C~~C~-~~f~~~~~l~~H~~~~~   89 (110)
T 2csh_A           64 -----------------------------------KPYECNICA-KRFMWRDSFHRHVTSCT   89 (110)
T ss_dssp             -----------------------------------CCEECSSSC-CEESCHHHHHHHHHHHH
T ss_pred             -----------------------------------CCeeCCCCc-chhcCHHHHHHHHHHcc
Confidence                                               789999999 99999999999999 65

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.46  E-value=5.6e-14  Score=95.62  Aligned_cols=55  Identities=27%  Similarity=0.768  Sum_probs=51.7

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHH-hhhcCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHV-ALFVGHT  326 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~-~~H~gek  326 (335)
                      +||.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+.+.|..|+ ++|.|+.
T Consensus         1 k~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~   58 (60)
T 2adr_A            1 RSFVCEVCT-RAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL   58 (60)
T ss_dssp             CCBCCTTTC-CCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCSS
T ss_pred             CcCcCCCCc-cccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCcC
Confidence            589999999 99999999999999 9999999999 999999999999997 7888763

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=1e-13  Score=99.72  Aligned_cols=64  Identities=25%  Similarity=0.443  Sum_probs=59.7

Q ss_pred             eCCcceeccc--CCCccCCCHHHHHHHHh--ccCCCCeeec---cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          268 HCPKMYVCKR--CNRKQFSVLSDLRTHEK--HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       268 ~~~k~y~C~~--C~~k~F~~~~~L~~H~~--H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +++++|.|..  |+ +.|.....|+.|++  |.++++|.|+   |++.|.++..|..|+++|++++||.|..
T Consensus         3 ~~~~~~~C~~~~C~-~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   73 (79)
T 2dlk_A            3 SGSSGMPCDFPGCG-RIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   73 (79)
T ss_dssp             SCCSSEECSSTTTC-CEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CCCCCccCCCCCCc-CccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCC
Confidence            4568999987  99 99999999999997  9999999996   9999999999999999999999999853

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.44  E-value=9.9e-14  Score=102.06  Aligned_cols=81  Identities=23%  Similarity=0.448  Sum_probs=73.5

Q ss_pred             CCCCCCC--CCCcCCCcchhHHHHHHhhcCCCcceecc--cccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCc
Q 042026          158 ANIPVAE--NGESFSEINGDIIEVDAVDLLAKYTHYCQ--VCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSM  233 (335)
Q Consensus       158 ~~~~c~~--c~~~~~~~~~~~~h~~~~~~~~~~~~~C~--~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c  233 (335)
                      ..+.|..  |++.|.....|..|+..+.  ++++|.|.  .|++.|.....|..|++.|.++                  
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------------------   63 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHT--GEKPYHCDWDGCGWKFARSDELTRHYRKHTGH------------------   63 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSC--SSCCEECCSTTTCCEESSHHHHHHHHHHHHCC------------------
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcC--CCCCcCCCCCCCCCccCCHHHHHHHHHHcCCC------------------
Confidence            3488988  9999999999999998765  77889997  5999999999999999999887                  


Q ss_pred             CchhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          234 GKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       234 ~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                                                           ++|.|..|+ +.|.....|..|++ |.
T Consensus        64 -------------------------------------~~~~C~~C~-~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           64 -------------------------------------RPFQCQKCD-RAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             -------------------------------------CCEECSSSS-CEESSHHHHHHHGGGGC
T ss_pred             -------------------------------------CCccCCCCC-cccCCHHHHHHHHHhhC
Confidence                                                 889999999 99999999999999 73

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=3.1e-13  Score=101.44  Aligned_cols=77  Identities=19%  Similarity=0.266  Sum_probs=65.9

Q ss_pred             CCcCCCcchhHHHHHHhhcCCCcceecccccccc-cCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHH
Q 042026          166 GESFSEINGDIIEVDAVDLLAKYTHYCQVCGKGF-KRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLW  244 (335)
Q Consensus       166 ~~~~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f-~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h  244 (335)
                      ...|.....+..|...+.  ++++|.|.+|++.| ....+|+.|+++| ++                             
T Consensus        13 ~~~~~~~~~~~~~~~~~~--~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~-----------------------------   60 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIV--DKGSVSCPTCQAVGRKTIEGLKKHMENC-KQ-----------------------------   60 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHH--HTSCEECTTTCSCEESSHHHHHHHHHHH-CC-----------------------------
T ss_pred             CCCCCCchHHHHHHHHhc--CCCCcCCCCCCCCcccCHHHHHHHHHHH-CC-----------------------------
Confidence            345677788888887776  67889999999999 9999999999999 77                             


Q ss_pred             HHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHH-Hh-ccCCCCe
Q 042026          245 NKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTH-EK-HCGDSKW  301 (335)
Q Consensus       245 ~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H-~~-H~g~~~~  301 (335)
                                                ++|.|.+|| |.|.....|+.| ++ |+++..|
T Consensus        61 --------------------------k~~~C~~Cg-k~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           61 --------------------------EMFTCHHCG-KQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             --------------------------CCCCCSSSC-CCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             --------------------------CCeECCCCC-CeeCCHHHHHHHhHHhcCCCCCC
Confidence                                      788899999 999999999999 78 9875444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=6.8e-14  Score=102.25  Aligned_cols=73  Identities=23%  Similarity=0.494  Sum_probs=63.5

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|..|++.|.+..                                                
T Consensus        11 ~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~------------------------------------------------   42 (86)
T 1x6h_A           11 TGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN------------------------------------------------   42 (86)
T ss_dssp             CCCCCEECSSSSCEESSHHHHHHHHHHTTCSS------------------------------------------------
T ss_pred             cCCCCCcCCCCCCccCCHHHHHHHHHHhcCCc------------------------------------------------
Confidence            36788999999999999999999998876541                                                


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccc
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTF  309 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F  309 (335)
                         ..+++|.|..|+ +.|.....|..|++ |+++++|.|. |+..|
T Consensus        43 ---~~~~~~~C~~C~-~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           43 ---FVPAAFVCSKCG-KTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             ---CCCCCEECSSSC-CEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ---CCCcceECCCCC-ChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence               012789999999 99999999999999 9999999999 99876

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=6.3e-14  Score=105.63  Aligned_cols=78  Identities=17%  Similarity=0.239  Sum_probs=65.9

Q ss_pred             CCCcchhHHHHHHhhcCCCcceeccccccccc-CcHHHHHHHHHhcC-CCcCcccccCCCccCCCCcCchhhhhhHHHHH
Q 042026          169 FSEINGDIIEVDAVDLLAKYTHYCQVCGKGFK-RDANLRMHMRAHGD-EYKTSAALTNPLKKNGSSMGKTMSLQSKLWNK  246 (335)
Q Consensus       169 ~~~~~~~~~h~~~~~~~~~~~~~C~~C~k~f~-~~~~L~~H~r~H~~-~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~  246 (335)
                      +.....+..|+..+.  ++++|.|.+|++.|. ....|+.|+++|.+ +                               
T Consensus         6 ~~~~~~~~~h~~~h~--~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~-------------------------------   52 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIH--ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQ-------------------------------   52 (98)
T ss_dssp             CCCCCSCSHHHHTTT--TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHH-------------------------------
T ss_pred             CCCCCcHHHHHHHhc--cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCC-------------------------------
Confidence            444455667777665  778899999999999 99999999999987 5                               


Q ss_pred             HhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          247 KHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       247 ~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                                              ++|.|.+|+ +.|.....|++|++ |++++|+...
T Consensus        53 ------------------------~~~~C~~C~-k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           53 ------------------------DALKCQHCR-KQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             ------------------------HHHSCSSSC-CCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             ------------------------CCEECCCCC-CccCCHHHHHHHHHHHcCCCCCCCC
Confidence                                    789999999 99999999999999 9999986543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=3.6e-14  Score=109.92  Aligned_cols=93  Identities=14%  Similarity=0.176  Sum_probs=74.6

Q ss_pred             CCCCCCCCCCCCcCCCcchhHHHHHHhhcCCCcce-ecccccccc--cCcHHHHHHHHHhcCCCcCcccccCCCccCCCC
Q 042026          156 NNANIPVAENGESFSEINGDIIEVDAVDLLAKYTH-YCQVCGKGF--KRDANLRMHMRAHGDEYKTSAALTNPLKKNGSS  232 (335)
Q Consensus       156 ~~~~~~c~~c~~~~~~~~~~~~h~~~~~~~~~~~~-~C~~C~k~f--~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~  232 (335)
                      .+..|.|..|++.|.....|..|+........+++ .|.+|++.|  .....|..|+++|.++                 
T Consensus        16 ~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~-----------------   78 (115)
T 2dmi_A           16 GASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ-----------------   78 (115)
T ss_dssp             CCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCC-----------------
T ss_pred             CCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCC-----------------
Confidence            34559999999999999999999987212344444 599999999  8888888887777666                 


Q ss_pred             cCchhhhhhHHHHHHhcCCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          233 MGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       233 c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                                                            +||.|.+|+ +.|.....|+.|++ |.......++
T Consensus        79 --------------------------------------~~~~C~~C~-k~f~~~~~L~~H~~~hh~~~~~~~~  112 (115)
T 2dmi_A           79 --------------------------------------KVLKCMYCG-HSFESLQDLSVHMIKTKHYQKVSGP  112 (115)
T ss_dssp             --------------------------------------SSCBCSSSC-CBCSSHHHHHHHHHHTTTTTCSCCC
T ss_pred             --------------------------------------cceECCCCC-CccCCHHHHHHHHHHhCCcccCCCC
Confidence                                                  888999999 99999999999999 7665554444

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.40  E-value=7.4e-14  Score=102.86  Aligned_cols=59  Identities=31%  Similarity=0.635  Sum_probs=55.3

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      ++||.|..|+ +.|.....|..|++ |++++||.|+ |++.|.+.+.|..|+++|++ ++|.|
T Consensus         1 ek~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c   61 (88)
T 1llm_C            1 MKPFQCRICM-RNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILE   61 (88)
T ss_dssp             CCCEECTTTC-CEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHH
T ss_pred             CCCCcCCCCC-CccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchH
Confidence            4899999999 99999999999999 9999999999 99999999999999999985 66665

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.40  E-value=2.9e-13  Score=99.03  Aligned_cols=58  Identities=26%  Similarity=0.560  Sum_probs=52.9

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceee
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYK  265 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~  265 (335)
                      ..++|.|++||+.|.+...|.+|+++|+++                                                  
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~--------------------------------------------------   54 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQERHLRLLHAA--------------------------------------------------   54 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHHHHHHTTSCS--------------------------------------------------
T ss_pred             CCCCEECCCCCCCcCcHHHHhhhhhhccCC--------------------------------------------------
Confidence            556799999999999999999999999888                                                  


Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh--ccCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDS  299 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~  299 (335)
                           +||.|.+|+ +.|.....|++|++  |+++.
T Consensus        55 -----k~~~C~~C~-k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           55 -----QVFPCKYCP-ATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             -----SSEECTTSS-CEESSHHHHHHHHHTTCTTCC
T ss_pred             -----CccCCCCCC-CEeCCHHHHHHhCcccCcCCC
Confidence                 889999999 99999999999975  98875

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=2.4e-13  Score=96.33  Aligned_cols=57  Identities=32%  Similarity=0.658  Sum_probs=53.3

Q ss_pred             eeeCCcceecc--cCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhc
Q 042026          266 RSHCPKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       266 ~h~~~k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      .+.++++|.|.  .|+ +.|.....|..|++ |.++++|.|+ ||+.|.+.+.|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~-k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCD-RRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBC-CEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCC-CccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            45677999997  599 99999999999999 9999999999 9999999999999999985

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.39  E-value=2.8e-13  Score=101.05  Aligned_cols=60  Identities=28%  Similarity=0.522  Sum_probs=56.6

Q ss_pred             cceecccCCCccCCCHHHHHHHHh--ccCCCC--------eeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK--HCGDSK--------WQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~--------~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      ..|.|..|+ +.|.....|..|++  |.++++        |.|. |++.|.+...|..|+++|+|++||.|.
T Consensus        24 ~~~~C~~C~-k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCD-RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCC-CCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccc-cccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            457899999 99999999999998  888888        9999 999999999999999999999999995

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3.4e-13  Score=94.80  Aligned_cols=61  Identities=26%  Similarity=0.438  Sum_probs=55.2

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|+.|+++|.++                                                 
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~-------------------------------------------------   35 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTD-------------------------------------------------   35 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCS-------------------------------------------------
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCC-------------------------------------------------
Confidence            4678899999999999999999999999877                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCe
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW  301 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~  301 (335)
                            ++|.|.+|+ +.|.....|..|++ |++++|.
T Consensus        36 ------~~~~C~~C~-~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A           36 ------RPFKCNYCS-FDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             ------CSEECSSSS-CEESSHHHHHHHHHHHHSSSCC
T ss_pred             ------CCEeCCCCC-CccCCHHHHHHHHHHHhCCCCC
Confidence                  788999999 99999999999999 9888764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=1.1e-12  Score=92.62  Aligned_cols=59  Identities=37%  Similarity=0.615  Sum_probs=53.3

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|+.|+++|.++                                                 
T Consensus        10 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~-------------------------------------------------   40 (72)
T 1x6e_A           10 SGEKPYGCVECGKAFSRSSILVQHQRVHTGE-------------------------------------------------   40 (72)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCS-------------------------------------------------
T ss_pred             CCCCCccCCCCCCccCCHHHHHHHHHhcCCC-------------------------------------------------
Confidence            3678899999999999999999999999877                                                 


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                            ++|.|..|+ +.|.....|+.|++ |+++.
T Consensus        41 ------~~~~C~~C~-~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           41 ------KPYKCLECG-KAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             ------CCEECSSSC-CEESSHHHHHHHHHHHHSSS
T ss_pred             ------CCeECCCCC-cccCCHHHHHHHHHhcCCCC
Confidence                  788999999 99999999999999 88764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.34  E-value=1e-12  Score=97.96  Aligned_cols=68  Identities=21%  Similarity=0.282  Sum_probs=57.9

Q ss_pred             ceecccccccccCcHHHHHHHHH-hcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeeee
Q 042026          189 THYCQVCGKGFKRDANLRMHMRA-HGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRS  267 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~-H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h  267 (335)
                      .|.|.+|++.|.....|..|+++ |.++++..+..|                                            
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c--------------------------------------------   60 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------------------------------   60 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC--------------------------------------------
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccce--------------------------------------------
Confidence            46799999999999999999998 888754333222                                            


Q ss_pred             eCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          268 HCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       268 ~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                         +.|.|..|+ +.|.....|+.|++ |+|++||.|+
T Consensus        61 ---~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           61 ---YWEECPREG-KSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             ---CCTTCSSTT-CCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             ---eccCCCCCC-cccCCHHHHHHHHHhcCCCCCCCCC
Confidence               568999999 99999999999999 9999999985

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.33  E-value=1.4e-12  Score=87.57  Aligned_cols=55  Identities=31%  Similarity=0.617  Sum_probs=51.2

Q ss_pred             ceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeeeee
Q 042026          189 THYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRSH  268 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h~  268 (335)
                      +|.|.+|++.|.....|..|+++|.++                                                     
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------------------------------------   27 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDV-----------------------------------------------------   27 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC-----------------------------------------------------
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCC-----------------------------------------------------
Confidence            589999999999999999999999887                                                     


Q ss_pred             CCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                        ++|.|..|+ +.|.....|..|++ |.+++
T Consensus        28 --~~~~C~~C~-~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A           28 --RPYHCTYCN-FSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             --CCEECSSSS-CEESSHHHHHHHHHSSSSCC
T ss_pred             --CCccCCCCC-chhcCHHHHHHHHHHhcccC
Confidence              889999999 99999999999999 88875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.32  E-value=1.1e-12  Score=88.01  Aligned_cols=54  Identities=33%  Similarity=0.627  Sum_probs=46.6

Q ss_pred             CcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeee
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKR  266 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~  266 (335)
                      +++|.|.+|++.|.....|..|+++|.++                                                   
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~---------------------------------------------------   30 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGE---------------------------------------------------   30 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCC---------------------------------------------------
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCC---------------------------------------------------
Confidence            56799999999999999999999999887                                                   


Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                          ++|.|..|+ +.|.....|..|++ |.
T Consensus        31 ----~~~~C~~C~-~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C           31 ----KPYKCEFCE-YAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ----CCEECSSSS-CEESSHHHHHHHHHHHC
T ss_pred             ----CCcCCCCCc-chhCCHHHHHHHHHHhc
Confidence                788899999 99999999999998 65

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.9e-14  Score=101.79  Aligned_cols=64  Identities=16%  Similarity=0.169  Sum_probs=57.3

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHhccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +.|++.|+++++|.|..|| +.|.....|..      +++|.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         7 ~~H~~~h~~~~~~~C~~C~-k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A            7 GKRQKIHLGDRSQKCSKCG-IIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             CCCCCCCCCCSEEECSSSC-CEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             HHHHHHhCCCCCeeCCccc-chhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            4688888889999999999 99998887765      7889999 999999999999999999999999985

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=2.7e-12  Score=92.07  Aligned_cols=67  Identities=21%  Similarity=0.388  Sum_probs=57.3

Q ss_pred             CCCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCccccccee
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHY  264 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~  264 (335)
                      .++++|.|.+|++.|.....|..|+++|.++.                                                
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~------------------------------------------------   34 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETV------------------------------------------------   34 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHT------------------------------------------------
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccC------------------------------------------------
Confidence            47889999999999999999999999998620                                                


Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh--ccCCCCeeec
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSKWQCS  304 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~~~C~  304 (335)
                          .+++|.|..|+ +.|.....|..|++  |.++++....
T Consensus        35 ----~~~~~~C~~C~-k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A           35 ----AALRFPCEFCG-KRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             ----TTCCEECTTTC-CEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             ----CCcccCCCCCC-chhCCHHHHHHHHHHhCCCCCCCccc
Confidence                01889999999 99999999999995  8888876554

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.28  E-value=6.4e-13  Score=88.47  Aligned_cols=49  Identities=16%  Similarity=0.207  Sum_probs=47.1

Q ss_pred             ccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          281 KQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       281 k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                      |.|.....|..|++ |++++||.|. ||+.|.+.+.|..|+++|+|++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            88999999999999 9999999999 9999999999999999999999984

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=5.3e-12  Score=85.63  Aligned_cols=55  Identities=38%  Similarity=0.779  Sum_probs=49.7

Q ss_pred             cceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeeee
Q 042026          188 YTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKRS  267 (335)
Q Consensus       188 ~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~h  267 (335)
                      ++|.|.+|++.|.....|..|+++|.++                                                    
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~----------------------------------------------------   28 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE----------------------------------------------------   28 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS----------------------------------------------------
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCC----------------------------------------------------
Confidence            4699999999999999999999999877                                                    


Q ss_pred             eCCcceecccCCCccCCCHHHHHHHH-h-ccCC
Q 042026          268 HCPKMYVCKRCNRKQFSVLSDLRTHE-K-HCGD  298 (335)
Q Consensus       268 ~~~k~y~C~~C~~k~F~~~~~L~~H~-~-H~g~  298 (335)
                         ++|.|..|+ +.|.....|..|+ + |.++
T Consensus        29 ---~~~~C~~C~-~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A           29 ---KPYPCGLCN-RAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             ---CSEECTTTC-CEESSHHHHHHHHTTTSCCS
T ss_pred             ---CCccCCCCC-CccCCHHHHHHHHHHHcCCc
Confidence               789999999 9999999999997 5 8875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=3e-12  Score=80.26  Aligned_cols=39  Identities=31%  Similarity=0.729  Sum_probs=31.3

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            566 7788888888 88888888888888888888888877

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.4e-12  Score=79.96  Aligned_cols=40  Identities=20%  Similarity=0.479  Sum_probs=32.6

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566 8888888888 888888888888888888888888874

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.9e-12  Score=81.52  Aligned_cols=41  Identities=20%  Similarity=0.411  Sum_probs=33.4

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            667 8888888888 8888888888888888888888888865

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.9e-12  Score=81.04  Aligned_cols=42  Identities=19%  Similarity=0.424  Sum_probs=36.5

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4778 8888999998 9999999999999999999999998864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.23  E-value=1.2e-11  Score=89.79  Aligned_cols=53  Identities=19%  Similarity=0.307  Sum_probs=48.4

Q ss_pred             CCC--CCCCCcCCCcchhHHHHHHhhcCCCcceeccc--ccccccCcHHHHHHHHHhcC
Q 042026          160 IPV--AENGESFSEINGDIIEVDAVDLLAKYTHYCQV--CGKGFKRDANLRMHMRAHGD  214 (335)
Q Consensus       160 ~~c--~~c~~~~~~~~~~~~h~~~~~~~~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~  214 (335)
                      +.|  +.|++.|.....|..|+..+.  ++++|.|++  |++.|.....|..|+++|.+
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~--~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   58 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHT--QQLPYECPHEGCDKRFSLPSRLKRHEKVHAG   58 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH--TTCCEECCSTTCCCEESSHHHHHHHHHHHHS
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhC--CCCCeeCCCCCCcCccCCHHHHHHHHHHhCC
Confidence            678  899999999999999998876  678899998  99999999999999998864

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-12  Score=81.43  Aligned_cols=41  Identities=27%  Similarity=0.348  Sum_probs=20.9

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|| +.|...+.|..|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECG-KNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCSCCCCEECSSSC-CEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCEEccccC-cccCCHHHHHHHHHHHcCCCCCCCC
Confidence            44444445555555555 55555555555555 5555555554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5e-12  Score=81.00  Aligned_cols=42  Identities=29%  Similarity=0.670  Sum_probs=32.9

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3667 7888888888 8888888888888888888888888754

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=5.4e-12  Score=80.83  Aligned_cols=41  Identities=24%  Similarity=0.538  Sum_probs=33.1

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|..
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            677 8888888888 8888888888888888888888888754

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.7e-12  Score=81.11  Aligned_cols=42  Identities=26%  Similarity=0.510  Sum_probs=34.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            4677 8888888888 8888888888888888888888888864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.2e-12  Score=80.49  Aligned_cols=41  Identities=27%  Similarity=0.577  Sum_probs=32.4

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |++ |+++++|.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            667 7788888888 8888888888888888888888887754

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=7.9e-12  Score=86.48  Aligned_cols=57  Identities=26%  Similarity=0.483  Sum_probs=50.4

Q ss_pred             CCCcceecccccccccCcHHHHHHHHH-h-cCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccc
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMRA-H-GDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKN  262 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r~-H-~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~  262 (335)
                      .++++|.|.+|++.|.....|..|++. | .++                                               
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~-----------------------------------------------   38 (66)
T 2drp_A            6 EGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV-----------------------------------------------   38 (66)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHSSSSC-----------------------------------------------
T ss_pred             CCCcceECCCCcchhCCHHHHHHHHHHHcCCCC-----------------------------------------------
Confidence            467889999999999999999999988 6 355                                               


Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                              ++|.|+.|+ +.|...+.|..|++ |.+
T Consensus        39 --------~~~~C~~C~-k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A           39 --------KVYPCPFCF-KEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             --------CCEECTTTC-CEESCHHHHHHHHHHHTC
T ss_pred             --------cCeECCCCC-CccCCHHHHHHHHHHHcC
Confidence                    889999999 99999999999998 764

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.22  E-value=5.5e-12  Score=78.99  Aligned_cols=39  Identities=21%  Similarity=0.511  Sum_probs=31.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+++.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            566 7888888888 88888888888888888888888876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.21  E-value=9.1e-12  Score=87.81  Aligned_cols=55  Identities=29%  Similarity=0.643  Sum_probs=51.2

Q ss_pred             eeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCCCeee--c-cCccccCHHHHHHHHhhh
Q 042026          267 SHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQC--S-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       267 h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~C--~-C~~~F~~~~~L~~H~~~H  322 (335)
                      +...++|.|..  |+ +.|.....|+.|++ |++++||.|  . |++.|.+...|.+|+++|
T Consensus        12 ~~~~~~~~C~~~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCG-KTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTC-CEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCc-cccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            44568999998  99 99999999999999 999999999  5 999999999999999887

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.5e-12  Score=80.79  Aligned_cols=42  Identities=24%  Similarity=0.444  Sum_probs=22.5

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|| +.|...+.|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECG-RGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSSSC-CEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCcCC-CccCCHHHHHHHHHHhCCCCCCCCC
Confidence            344555555555555555 55555555555555 5555555554

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.21  E-value=6.6e-12  Score=80.40  Aligned_cols=42  Identities=24%  Similarity=0.590  Sum_probs=34.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      .|++ |++++||.|. |++.|.+...|..|+++|+|++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677 8888888888 8888888888888888888888888853

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.9e-12  Score=80.23  Aligned_cols=42  Identities=24%  Similarity=0.545  Sum_probs=35.2

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            4777 8888888888 8888888888888888888888888854

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.9e-12  Score=79.71  Aligned_cols=39  Identities=26%  Similarity=0.637  Sum_probs=28.6

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            556 7777777777 77777777777777777777777766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.9e-12  Score=87.37  Aligned_cols=58  Identities=21%  Similarity=0.496  Sum_probs=53.1

Q ss_pred             CCcceecccCCCccCCCHHHHHHHHhccCCCCeeec--cCccccCHHHHHHHHhhhcCCCCc
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCS--CGTTFSRKDKLMGHVALFVGHTPA  328 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~H~g~~~~~C~--C~~~F~~~~~L~~H~~~H~gekp~  328 (335)
                      +++||.|..|+ +.|. .+.|+.|++-++++||.|+  ||+.|..++.|..|+++|...+|.
T Consensus         7 ~~~~~~C~~C~-k~f~-~~~L~~H~~~~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~i   66 (66)
T 2eod_A            7 GKRTQPCTYCT-KEFV-FDTIQSHQYQCPRLPVACPNQCGVGTVAREDLPGHLKDSCNTALV   66 (66)
T ss_dssp             CCCEEECSSSC-CEEE-HHHHHHHHHHCSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCCC
T ss_pred             CCCCeeccccC-CccC-HHHHHHHHHHcCCcCccCCcccCcccccHHHHHHHHHhhcccCcC
Confidence            34899999999 9999 9999999886789999997  999999999999999999887763

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=5.8e-12  Score=79.81  Aligned_cols=40  Identities=25%  Similarity=0.464  Sum_probs=24.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. ||+.|.+.+.|..|+++|+|++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS   42 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445 6666666666 666666666666666666666666653

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.9e-12  Score=80.30  Aligned_cols=42  Identities=24%  Similarity=0.605  Sum_probs=31.7

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4666 7777777777 7777777777777777777777777754

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.20  E-value=6.5e-12  Score=80.43  Aligned_cols=39  Identities=26%  Similarity=0.652  Sum_probs=21.8

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            445 5555555555 55555555555555555555555555

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.7e-12  Score=79.41  Aligned_cols=40  Identities=23%  Similarity=0.532  Sum_probs=32.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4677 8888888888 88888888888888888888888877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.20  E-value=6.6e-12  Score=80.32  Aligned_cols=41  Identities=32%  Similarity=0.426  Sum_probs=21.6

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCA-KTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSS-CEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             cccCCCCCCceECCCCC-chhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44445555555555555 55555555555555 5555555554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.6e-12  Score=80.33  Aligned_cols=39  Identities=23%  Similarity=0.590  Sum_probs=19.6

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSS
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            444 4455555555 55555555555555555555555544

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.4e-12  Score=79.90  Aligned_cols=39  Identities=31%  Similarity=0.695  Sum_probs=28.8

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            666 7777777777 77777777777777777777777776

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.4e-12  Score=80.13  Aligned_cols=39  Identities=28%  Similarity=0.637  Sum_probs=21.2

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP   43 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCS
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.6e-12  Score=80.08  Aligned_cols=41  Identities=29%  Similarity=0.412  Sum_probs=21.1

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECG-KVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCSSCBCTTTC-CBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCcCCCCCcCeECCCCC-CeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            44444445555555555 55555555555555 5555555554

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7e-12  Score=80.23  Aligned_cols=42  Identities=21%  Similarity=0.627  Sum_probs=31.7

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            3666 7777777777 7777777777777777777777777753

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6e-12  Score=80.56  Aligned_cols=41  Identities=22%  Similarity=0.639  Sum_probs=29.4

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|. |++.|.+++.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3666 7777777777 777777777777777777777777764

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.3e-12  Score=80.19  Aligned_cols=42  Identities=24%  Similarity=0.568  Sum_probs=33.4

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3677 8888888888 8888888888888888888888888754

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.5e-12  Score=79.47  Aligned_cols=39  Identities=26%  Similarity=0.634  Sum_probs=30.3

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            566 7777778887 88888888888888778887777776

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.20  E-value=6.9e-12  Score=80.26  Aligned_cols=41  Identities=29%  Similarity=0.460  Sum_probs=21.5

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECD-MCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCCCCSSSC-CCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CcCccCCCcCeECCCCC-cccCCHHHHHHHHHHcCCCCCcCCC
Confidence            44444555555555555 55555555555555 5555555554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.6e-12  Score=79.84  Aligned_cols=39  Identities=28%  Similarity=0.708  Sum_probs=28.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            566 7777777777 77777777777777777777777766

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.6e-12  Score=80.41  Aligned_cols=39  Identities=28%  Similarity=0.652  Sum_probs=19.4

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+++.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP   43 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            444 4444555554 55555555555555555555555544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.20  E-value=7.6e-12  Score=80.06  Aligned_cols=39  Identities=28%  Similarity=0.703  Sum_probs=23.4

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP   43 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSS
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCC
Confidence            455 5556666665 66666666666666666666666655

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.20  E-value=7.3e-12  Score=80.19  Aligned_cols=43  Identities=30%  Similarity=0.453  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECG-KAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSC-CBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCC-chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.3e-12  Score=79.87  Aligned_cols=41  Identities=20%  Similarity=0.546  Sum_probs=27.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS   44 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCS
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            3556 6666666666 666666666666666666666666664

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=8.2e-12  Score=79.87  Aligned_cols=41  Identities=29%  Similarity=0.417  Sum_probs=19.9

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            3 SGSSGTGEKPHECRECG-KSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSCBCTTTC-CBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CccccCCCCCeeCCCCC-chhCCHHHHHHHHHHcCCCCCCCCC
Confidence            34444444444454454 44555445555544 4444444444

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.19  E-value=7.2e-12  Score=80.18  Aligned_cols=43  Identities=33%  Similarity=0.444  Sum_probs=40.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECG-KVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSC-CEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCc-chhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999998 7

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.9e-12  Score=79.52  Aligned_cols=42  Identities=21%  Similarity=0.536  Sum_probs=32.1

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3667 7777778887 8888888888888888888888877753

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.1e-12  Score=79.88  Aligned_cols=40  Identities=23%  Similarity=0.570  Sum_probs=25.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+++.|..|+++|+|++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSS
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555 6666666666 666666666666666666666666663

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.7e-12  Score=79.99  Aligned_cols=42  Identities=24%  Similarity=0.566  Sum_probs=32.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            3667 7777788887 8888888888888888888888887754

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=80.25  Aligned_cols=40  Identities=28%  Similarity=0.605  Sum_probs=29.7

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            666 7777777777 777777777777777777777777774

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.5e-12  Score=80.11  Aligned_cols=40  Identities=28%  Similarity=0.655  Sum_probs=23.7

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS   44 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555 5556666665 666666666666666666666666553

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.9e-12  Score=80.27  Aligned_cols=39  Identities=26%  Similarity=0.527  Sum_probs=20.9

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP   43 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.8e-12  Score=80.02  Aligned_cols=39  Identities=28%  Similarity=0.626  Sum_probs=20.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP   43 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCS
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555554

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=8.2e-12  Score=79.86  Aligned_cols=41  Identities=29%  Similarity=0.463  Sum_probs=21.2

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECG-KNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECTTTC-CEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             ccccCCCCCCeECCCcC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444455555555555 55555555555555 5555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.9e-12  Score=79.69  Aligned_cols=40  Identities=23%  Similarity=0.475  Sum_probs=29.4

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            3666 7777777777 77777777777777777777777776

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.9e-12  Score=79.94  Aligned_cols=39  Identities=31%  Similarity=0.635  Sum_probs=20.9

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP   43 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.2e-12  Score=79.91  Aligned_cols=43  Identities=28%  Similarity=0.395  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCG-KAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSC-CEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcC-CccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.3e-12  Score=79.83  Aligned_cols=40  Identities=23%  Similarity=0.605  Sum_probs=24.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS   44 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCC
Confidence            555 5666666666 666666666666666666666666553

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.5e-12  Score=79.80  Aligned_cols=42  Identities=24%  Similarity=0.533  Sum_probs=33.9

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677 8888888888 8888888888888888888888888854

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.4e-12  Score=79.82  Aligned_cols=42  Identities=26%  Similarity=0.624  Sum_probs=34.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3677 8888888888 8888888888888888888888888864

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.2e-12  Score=80.54  Aligned_cols=43  Identities=28%  Similarity=0.411  Sum_probs=41.3

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECG-KAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSC-CEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCC-chhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.4e-12  Score=80.12  Aligned_cols=42  Identities=29%  Similarity=0.610  Sum_probs=31.9

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3667 7777777777 7777777777777877777777777753

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.6e-12  Score=79.61  Aligned_cols=41  Identities=24%  Similarity=0.437  Sum_probs=22.7

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCG-KGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSC-CBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccC-chhCCHHHHHHHHHhcCCCCCCCCC
Confidence            44455555555555555 55555555555555 5555555554

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.1e-12  Score=79.64  Aligned_cols=42  Identities=26%  Similarity=0.617  Sum_probs=33.1

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      +|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4677 8888888888 8888888888888888888888888753

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=6.6e-12  Score=79.54  Aligned_cols=40  Identities=18%  Similarity=0.491  Sum_probs=31.1

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      +|++ |++++||.|+ |++.|.+...|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            3667 7777778887 88888887888888888888788777

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.9e-12  Score=79.98  Aligned_cols=39  Identities=31%  Similarity=0.681  Sum_probs=21.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. ||+.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCS
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8e-12  Score=79.97  Aligned_cols=39  Identities=23%  Similarity=0.587  Sum_probs=19.7

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCC
Confidence            444 4555555555 55555555555555555555555544

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.7e-12  Score=80.00  Aligned_cols=43  Identities=33%  Similarity=0.476  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECG-KSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTT-BCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCC-CccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.7e-12  Score=79.99  Aligned_cols=43  Identities=28%  Similarity=0.387  Sum_probs=40.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECG-KVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTT-EECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcC-hhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999998 7

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=8.4e-12  Score=79.85  Aligned_cols=41  Identities=32%  Similarity=0.438  Sum_probs=20.5

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECG-KGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCCCSEECSSSC-CEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCcCccCCCcc-chhCCHHHHHHHHHHhCCCCCCCCC
Confidence            44444444555555555 55555555555554 5555555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.4e-12  Score=79.86  Aligned_cols=43  Identities=26%  Similarity=0.401  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|| +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECG-KAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSC-CEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCC-cccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.7e-12  Score=79.79  Aligned_cols=43  Identities=28%  Similarity=0.420  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICG-KSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSC-CEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCC-cccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999 99999999999999 9999999998 7

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.6e-12  Score=80.12  Aligned_cols=41  Identities=20%  Similarity=0.509  Sum_probs=39.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|+ ||+.|.+.+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS   44 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCS
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCC
Confidence            5888 9999999999 999999999999999999999999995

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.6e-12  Score=79.54  Aligned_cols=39  Identities=26%  Similarity=0.524  Sum_probs=20.1

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ ||+.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP   43 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCS
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555554

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8e-12  Score=79.96  Aligned_cols=40  Identities=23%  Similarity=0.623  Sum_probs=24.2

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+++.|..|+++|+|++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            555 6666666666 666666666666666666666666553

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.5e-12  Score=80.09  Aligned_cols=41  Identities=22%  Similarity=0.598  Sum_probs=39.2

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCC
Confidence            4788 9999999999 999999999999999999999999995

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.19  E-value=3.2e-12  Score=100.91  Aligned_cols=79  Identities=14%  Similarity=0.064  Sum_probs=60.4

Q ss_pred             Ccceeccccccccc------CcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhh--hhhHHHHHHhcCCCCCCCcc
Q 042026          187 KYTHYCQVCGKGFK------RDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMS--LQSKLWNKKHAKFQPLKSMI  258 (335)
Q Consensus       187 ~~~~~C~~C~k~f~------~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~--~~l~~h~~~h~~~~p~~C~~  258 (335)
                      .+.+.|.+|++.|.      ....|..|+ .|+++++|.|..          |++.|.  ..|..|+++|  +       
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~----------C~k~f~~~~~l~~H~~~H--~-------   98 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL----------CLMPFSSSVSLKQHIRYT--E-------   98 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT----------TCCEESSHHHHHHHHHHT--C-------
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC----------CCcccCCHhHHHHHHHHC--C-------
Confidence            35577888877776      445566665 577788888754          477776  5677777777  2       


Q ss_pred             cccceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          259 CVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       259 C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                                  +||.|..|+ +.|...+.|+.|++ |+|.
T Consensus        99 ------------~~~~C~~C~-k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           99 ------------HTKVCPVCK-KEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             ------------CCCBCTTTC-CBCSSHHHHHHHHHHTTCC
T ss_pred             ------------CCCCCCCCC-cccCCHHHHHHHHHHHCCc
Confidence                        778999999 99999999999999 8875

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=8.3e-12  Score=79.07  Aligned_cols=42  Identities=29%  Similarity=0.318  Sum_probs=39.9

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      |+++|+++++|.|..|| +.|...+.|+.|++ |++++||.|+ |
T Consensus         1 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCE-KAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSS-CEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCC-cccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788999999999999 99999999999999 9999999998 7

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.2e-12  Score=79.92  Aligned_cols=43  Identities=35%  Similarity=0.508  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECG-KAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSC-CEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCC-chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.8e-12  Score=80.02  Aligned_cols=43  Identities=28%  Similarity=0.437  Sum_probs=40.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECG-KAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSC-CEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCC-hhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999998 6

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.5e-12  Score=79.84  Aligned_cols=39  Identities=26%  Similarity=0.532  Sum_probs=20.8

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|.+|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSS
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.1e-12  Score=79.94  Aligned_cols=43  Identities=28%  Similarity=0.386  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECG-KVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSC-CEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCC-chhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.19  E-value=7.2e-12  Score=80.14  Aligned_cols=41  Identities=29%  Similarity=0.477  Sum_probs=39.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888 9999999999 999999999999999999999999995

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.2e-12  Score=79.72  Aligned_cols=41  Identities=32%  Similarity=0.391  Sum_probs=20.4

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|++|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECG-KAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CSSCSSCCCSCBCSSSC-CBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCcCcCCCCCcCCCccC-hhhCChHHHHHHHHHhCCCCCCCCC
Confidence            34444444555555555 55555555555555 5555555554

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.6e-12  Score=80.07  Aligned_cols=40  Identities=23%  Similarity=0.613  Sum_probs=24.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555 5666666666 666666666666666666666666553

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.4e-12  Score=80.07  Aligned_cols=43  Identities=21%  Similarity=0.318  Sum_probs=40.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECG-KSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSC-CEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCC-hhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999998 7

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=79.25  Aligned_cols=41  Identities=22%  Similarity=0.574  Sum_probs=33.8

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            3677 8888888888 888888888888888888888888885

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.2e-12  Score=79.67  Aligned_cols=43  Identities=26%  Similarity=0.345  Sum_probs=40.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|.++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCG-KAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTC-CCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCC-ceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999998 7

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.9e-12  Score=80.00  Aligned_cols=43  Identities=28%  Similarity=0.446  Sum_probs=40.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCG-KAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTC-CEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCC-chhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999998 7

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.2e-12  Score=79.71  Aligned_cols=41  Identities=22%  Similarity=0.515  Sum_probs=32.4

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667 7888888888 888888888888888888888888775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.8e-12  Score=79.76  Aligned_cols=42  Identities=21%  Similarity=0.608  Sum_probs=33.1

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            3667 8888888888 8888888888888888888888888753

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.9e-12  Score=79.74  Aligned_cols=39  Identities=26%  Similarity=0.636  Sum_probs=21.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+++.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP   43 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.9e-12  Score=79.74  Aligned_cols=43  Identities=28%  Similarity=0.369  Sum_probs=41.2

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECG-KVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTC-CEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCC-chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            488999999999999999 99999999999999 9999999998 7

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1e-11  Score=79.50  Aligned_cols=43  Identities=26%  Similarity=0.369  Sum_probs=41.5

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECG-KAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSC-CEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCC-CeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9e-12  Score=79.71  Aligned_cols=39  Identities=23%  Similarity=0.646  Sum_probs=22.1

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCC
Confidence            445 5555555555 55555555555555555555555555

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1e-11  Score=79.51  Aligned_cols=40  Identities=23%  Similarity=0.602  Sum_probs=27.9

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556 6677777777 777777777777777777777777664

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.5e-12  Score=79.59  Aligned_cols=39  Identities=21%  Similarity=0.574  Sum_probs=20.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+++.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP   43 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555554

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.5e-12  Score=79.84  Aligned_cols=43  Identities=28%  Similarity=0.388  Sum_probs=41.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECG-KVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSC-CEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCC-CccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            588899999999999999 99999999999999 9999999998 7

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=9e-12  Score=78.91  Aligned_cols=40  Identities=18%  Similarity=0.429  Sum_probs=28.8

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            3666 7777777777 77777777777777777777777776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=8.8e-12  Score=79.76  Aligned_cols=41  Identities=22%  Similarity=0.538  Sum_probs=39.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTT
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788 9999999999 999999999999999999999999995

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9e-12  Score=79.67  Aligned_cols=41  Identities=24%  Similarity=0.562  Sum_probs=39.2

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            4888 9999999999 999999999999999999999999995

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.7e-12  Score=79.56  Aligned_cols=43  Identities=23%  Similarity=0.286  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICG-KSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSC-CCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCC-chhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.18  E-value=8.1e-12  Score=79.92  Aligned_cols=41  Identities=27%  Similarity=0.602  Sum_probs=39.2

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSS
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4888 9999999999 999999999999999999999999995

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.3e-12  Score=79.68  Aligned_cols=41  Identities=29%  Similarity=0.585  Sum_probs=39.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|+ |++.|.+++.|.+|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS   44 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCC
Confidence            3788 9999999999 999999999999999999999999995

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=9.9e-12  Score=79.52  Aligned_cols=41  Identities=27%  Similarity=0.446  Sum_probs=20.8

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         3 H~~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCG-KGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEETTTT-EEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCcCCCCCCCeECCCCC-CccCCHHHHHHHHHhhCCCCCCCCC
Confidence            44444444555555555 55555555555555 5555555554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.18  E-value=7.3e-12  Score=80.20  Aligned_cols=39  Identities=31%  Similarity=0.624  Sum_probs=19.9

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+++.|.+|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555554

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.18  E-value=8e-12  Score=80.00  Aligned_cols=43  Identities=30%  Similarity=0.393  Sum_probs=41.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECG-KGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSC-CCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccC-cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999998 7

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=79.33  Aligned_cols=41  Identities=22%  Similarity=0.591  Sum_probs=31.5

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667 7777777777 777787777788887777777777775

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.5e-12  Score=79.65  Aligned_cols=40  Identities=18%  Similarity=0.410  Sum_probs=38.6

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+++.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS   44 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            788 9999999999 999999999999999999999999995

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=7.4e-12  Score=80.12  Aligned_cols=41  Identities=29%  Similarity=0.423  Sum_probs=20.4

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECG-KVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSEECSSSC-CEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             cCcCCCCCCCeECCcCC-chhCCHHHHHHHHHhcCCCCCCCCC
Confidence            34444444555555555 55555555555554 5555555554

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.2e-12  Score=79.63  Aligned_cols=39  Identities=23%  Similarity=0.465  Sum_probs=20.1

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ ||+.|.+.+.|..|+++|+|++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP   43 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            444 5555555555 55555555555555555555555554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.17  E-value=1.1e-11  Score=79.24  Aligned_cols=39  Identities=23%  Similarity=0.569  Sum_probs=20.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP   43 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCST
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCC
Confidence            444 5555555555 55555555555555555555555554

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.7e-12  Score=79.51  Aligned_cols=39  Identities=28%  Similarity=0.665  Sum_probs=19.2

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP   43 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCS
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            444 4444445554 55555555555555555555555444

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.2e-11  Score=79.04  Aligned_cols=41  Identities=24%  Similarity=0.624  Sum_probs=31.8

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3667 7777788887 888888888888888888888888775

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.1e-11  Score=79.22  Aligned_cols=43  Identities=33%  Similarity=0.469  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|| +.|...+.|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCG-KSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSC-CBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccC-hhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=9.7e-12  Score=79.51  Aligned_cols=41  Identities=20%  Similarity=0.383  Sum_probs=39.2

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|+|++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCS
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4888 9999999999 999999999999999999999999995

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.2e-11  Score=79.05  Aligned_cols=43  Identities=26%  Similarity=0.458  Sum_probs=41.5

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECG-KRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTT-EEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCC-cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999 99999999999999 9999999998 7

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=79.55  Aligned_cols=41  Identities=27%  Similarity=0.371  Sum_probs=20.4

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECG-KAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTT-BCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCC-chhCCHHHHHHHHHHcCCCCCCCCC
Confidence            34444444555555555 55555555555554 5555555554

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.2e-11  Score=79.13  Aligned_cols=40  Identities=23%  Similarity=0.416  Sum_probs=24.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|+|++||.|.
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPS   44 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTT
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445 5666666666 666666666666666666666666553

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.17  E-value=1.1e-11  Score=79.31  Aligned_cols=43  Identities=30%  Similarity=0.412  Sum_probs=41.3

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECG-KSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSC-CEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccc-cccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.2e-11  Score=79.07  Aligned_cols=40  Identities=30%  Similarity=0.595  Sum_probs=23.9

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCC
Confidence            455 5666666666 666666666666666666666666553

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.4e-11  Score=78.09  Aligned_cols=39  Identities=23%  Similarity=0.504  Sum_probs=30.3

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            666 7777777777 77777777777777777777777776

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=79.56  Aligned_cols=40  Identities=23%  Similarity=0.574  Sum_probs=30.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+...|.+|+++|++++||.|-
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            566 7777777777 777777777777777777777777774

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.3e-11  Score=79.00  Aligned_cols=39  Identities=21%  Similarity=0.507  Sum_probs=21.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP   43 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSS
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=79.48  Aligned_cols=43  Identities=30%  Similarity=0.414  Sum_probs=41.1

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+ |
T Consensus         2 ~h~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECG-KTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTT-EEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCC-cccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999998 7

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8e-12  Score=79.95  Aligned_cols=42  Identities=24%  Similarity=0.467  Sum_probs=33.4

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      .|++ |++++||.|. |++.|.+...|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCSC
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4677 8888888888 8888888888888888888888888754

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.1e-11  Score=79.26  Aligned_cols=41  Identities=24%  Similarity=0.477  Sum_probs=39.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ ||+.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4888 9999999999 999999999999999999999999995

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=79.35  Aligned_cols=43  Identities=26%  Similarity=0.318  Sum_probs=41.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|| +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECG-KAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSC-CEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCC-CccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=79.16  Aligned_cols=43  Identities=23%  Similarity=0.367  Sum_probs=40.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~h~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECG-KGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSC-CEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCC-CcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999998 7

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=79.50  Aligned_cols=41  Identities=22%  Similarity=0.519  Sum_probs=29.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |++ |++++||.|. |++.|.++..|..|+++|++++||.|-.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            556 7777777777 7777777777777777777777777653

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=79.36  Aligned_cols=40  Identities=23%  Similarity=0.541  Sum_probs=38.6

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS   44 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            788 9999999999 999999999999999999999999995

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=79.28  Aligned_cols=41  Identities=22%  Similarity=0.495  Sum_probs=39.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCS
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCC
Confidence            3788 9999999999 999999999999999999999999995

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.7e-12  Score=79.24  Aligned_cols=41  Identities=17%  Similarity=0.394  Sum_probs=31.8

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3667 7777888887 888888888888888888888888773

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.5e-11  Score=78.63  Aligned_cols=44  Identities=27%  Similarity=0.459  Sum_probs=42.0

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      ++|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+ |
T Consensus         1 ~~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            1 GSSGSSGSGEKPYVCDYCG-KAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCSEECSSSC-CEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCCeECCCCC-hhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3689999999999999999 99999999999999 9999999998 7

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.3e-11  Score=79.03  Aligned_cols=43  Identities=21%  Similarity=0.265  Sum_probs=40.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      .|+++|.++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECG-EIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTC-CEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccC-hhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999998 7

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=79.29  Aligned_cols=43  Identities=30%  Similarity=0.454  Sum_probs=41.3

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECG-KAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTC-CCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCC-CccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999 99999999999999 9999999998 7

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=78.77  Aligned_cols=39  Identities=26%  Similarity=0.497  Sum_probs=21.8

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|+ |++.|.++..|..|+++|++++||.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP   43 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            444 5555555555 55555555555555555555555555

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.4e-11  Score=78.11  Aligned_cols=39  Identities=23%  Similarity=0.497  Sum_probs=30.1

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++++||.|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            556 7777777777 77777777777777777777777777

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.1e-12  Score=79.93  Aligned_cols=41  Identities=22%  Similarity=0.584  Sum_probs=39.2

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ |++.|.+++.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4888 9999999999 999999999999999999999999995

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.16  E-value=1.5e-11  Score=78.66  Aligned_cols=43  Identities=23%  Similarity=0.303  Sum_probs=41.1

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +|+++|.++++|.|..|+ +.|.....|..|++ |++++||.|. |
T Consensus         2 ~h~~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCE-KSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSS-CEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCC-cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999998 7

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.6e-12  Score=79.80  Aligned_cols=41  Identities=22%  Similarity=0.396  Sum_probs=22.7

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECG-KSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECTTTC-CEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCeECCCCC-cccCCHHHHHHHHHHcCCCCCCCCC
Confidence            44555555555555555 55555555555555 5555555554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.6e-13  Score=96.89  Aligned_cols=64  Identities=23%  Similarity=0.221  Sum_probs=50.6

Q ss_pred             hHHHHHHhcCCCCCCCcccccceeeeeeC--CcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          241 SKLWNKKHAKFQPLKSMICVKNHYKRSHC--PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       241 l~~h~~~h~~~~p~~C~~C~k~h~~~h~~--~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      |..|+++|.+++||.|..|++.+......  +++|.|..|+ +.|.....|..|++ |++++||.|+ |
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~~~~~~C~~C~-~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTPMCEKCR-KDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCCSSSCCCHHHH-HTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCcCCCCCCCCCC-hhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            44566667777777777777754322211  7899999999 99999999999999 9999999998 7

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.5e-11  Score=78.67  Aligned_cols=41  Identities=27%  Similarity=0.389  Sum_probs=20.2

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|.++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECG-KGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECSSSC-CEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECcccC-chhCCHHHHHHHHHHHcCCCCCCCC
Confidence            34444444455555555 45555555555554 5555555444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=3.5e-11  Score=84.91  Aligned_cols=56  Identities=30%  Similarity=0.597  Sum_probs=50.7

Q ss_pred             CCCcceecc--cccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccc
Q 042026          185 LAKYTHYCQ--VCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKN  262 (335)
Q Consensus       185 ~~~~~~~C~--~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~  262 (335)
                      .++++|.|+  .|++.|.....|..|+++|.++                                               
T Consensus        15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~-----------------------------------------------   47 (73)
T 1f2i_G           15 PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQ-----------------------------------------------   47 (73)
T ss_dssp             CCCCCEECSSTTBCCEESSHHHHHHHHHHHHCC-----------------------------------------------
T ss_pred             CCCCccCCcCCCCCCccCCHHHHHHHHHhhCCC-----------------------------------------------
Confidence            467889997  5999999999999999999887                                               


Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                              ++|.|..|| +.|.....|..|++ |+
T Consensus        48 --------~~~~C~~C~-~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           48 --------KPFQCRICM-RNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --------CCEECTTTC-CEESCHHHHHHHHTTCC
T ss_pred             --------CCeECCCCC-chhCCHHHHHHHHHhcC
Confidence                    889999999 99999999999998 84

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.8e-11  Score=84.84  Aligned_cols=57  Identities=25%  Similarity=0.382  Sum_probs=49.5

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceee
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYK  265 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~  265 (335)
                      +.++|.|.+|++.|. ...|..|+++ .++                                                  
T Consensus         7 ~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~--------------------------------------------------   34 (66)
T 2eod_A            7 GKRTQPCTYCTKEFV-FDTIQSHQYQ-CPR--------------------------------------------------   34 (66)
T ss_dssp             CCCEEECSSSCCEEE-HHHHHHHHHH-CSS--------------------------------------------------
T ss_pred             CCCCeeccccCCccC-HHHHHHHHHH-cCC--------------------------------------------------
Confidence            567899999999999 9999999988 766                                                  


Q ss_pred             eeeCCcceecc-cCCCccCCCHHHHHHHHh-ccCCCC
Q 042026          266 RSHCPKMYVCK-RCNRKQFSVLSDLRTHEK-HCGDSK  300 (335)
Q Consensus       266 ~h~~~k~y~C~-~C~~k~F~~~~~L~~H~~-H~g~~~  300 (335)
                           +||.|. .|| +.|...+.|..|++ |...++
T Consensus        35 -----~p~~C~~~C~-k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A           35 -----LPVACPNQCG-VGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             -----SEEECTTCCS-CCEEETTTHHHHHHTTSSSCC
T ss_pred             -----cCccCCcccC-cccccHHHHHHHHHhhcccCc
Confidence                 788888 899 99999999999998 887765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.5e-11  Score=78.71  Aligned_cols=42  Identities=33%  Similarity=0.464  Sum_probs=40.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECG-KAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSC-CEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCC-chhCCHHHHHHHHHHcCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999997

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=4.9e-11  Score=85.21  Aligned_cols=61  Identities=21%  Similarity=0.482  Sum_probs=50.9

Q ss_pred             CCCcceecccccccccCcHHHHHHHH-HhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccce
Q 042026          185 LAKYTHYCQVCGKGFKRDANLRMHMR-AHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       185 ~~~~~~~C~~C~k~f~~~~~L~~H~r-~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      .++++|.|.+|++.|.....|..|++ .|.++                                                
T Consensus        11 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~------------------------------------------------   42 (77)
T 2ct1_A           11 SGEKPYECYICHARFTQSGTMKMHILQKHTEN------------------------------------------------   42 (77)
T ss_dssp             SCCCSEECTTTCCEESCHHHHHHHHHHHSSSS------------------------------------------------
T ss_pred             CCCCCeECCCcCchhCCHHHHHHHHHHhcCCC------------------------------------------------
Confidence            36788999999999999999999987 56543                                                


Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHh--ccCCCC
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSK  300 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~  300 (335)
                            +++|.|..|+ +.|.....|..|++  |.++.|
T Consensus        43 ------~~~~~C~~C~-~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           43 ------VAKFHCPHCD-TVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             ------CSSEECSSSS-CEESSHHHHHHHHHHTSCCSCC
T ss_pred             ------CCccCCCCCC-CccCCHHHHHHHHHHhCCCCCC
Confidence                  1789999999 99999999999998  666665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.3e-11  Score=78.96  Aligned_cols=41  Identities=24%  Similarity=0.603  Sum_probs=32.4

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .|++ |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677 7888888888 888888888888888888888888775

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.6e-11  Score=78.56  Aligned_cols=40  Identities=20%  Similarity=0.426  Sum_probs=38.5

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS   44 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCC
Confidence            778 9999999999 999999999999999999999999995

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=1.4e-11  Score=78.91  Aligned_cols=40  Identities=18%  Similarity=0.295  Sum_probs=30.6

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC-CCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG-HTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g-ekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+.+.|..|+++|++ ++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            666 7777777777 77777777777777777777 7777774

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=77.74  Aligned_cols=42  Identities=26%  Similarity=0.392  Sum_probs=40.2

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECG-KAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSC-CEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCC-chhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999997

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.2e-11  Score=78.13  Aligned_cols=40  Identities=23%  Similarity=0.538  Sum_probs=29.3

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHh-hhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVA-LFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~-~H~gekp~~c~  331 (335)
                      |++ |++++||.|. |++.|.+.+.|..|++ +|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~   45 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS   45 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCC
Confidence            566 7777777777 7777777777777777 77777777764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1e-11  Score=79.42  Aligned_cols=41  Identities=20%  Similarity=0.575  Sum_probs=39.3

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      +|++ |++++||.|+ |++.|.+.+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4888 9999999999 999999999999999999999999995

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.1e-11  Score=77.13  Aligned_cols=43  Identities=30%  Similarity=0.448  Sum_probs=40.6

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      ++|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         1 ~~H~~~H~~~~~~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            1 GSSGSSGTGEKPYECKVCS-KAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCSEECSSSC-CEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCCcCeECCCCC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3688899999999999999 99999999999999 9999999996

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=3.2e-11  Score=75.41  Aligned_cols=41  Identities=27%  Similarity=0.471  Sum_probs=38.5

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECG-KAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSC-CEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcC-hhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56788899999999999 99999999999999 9999999995

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=3.7e-11  Score=79.79  Aligned_cols=45  Identities=29%  Similarity=0.497  Sum_probs=41.5

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh--ccCCCCeeec-cCccccC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSKWQCS-CGTTFSR  311 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~~~C~-C~~~F~~  311 (335)
                      .|.++++|.|.+|+ +.|.....|+.|++  |++++||.|. |++.|.+
T Consensus         6 ~~~~~k~~~C~~C~-k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCG-KGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSC-CEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCC-cccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            45677999999999 99999999999985  9999999999 9999986

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.3e-11  Score=77.03  Aligned_cols=42  Identities=26%  Similarity=0.417  Sum_probs=39.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECG-KAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSC-CEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCC-CccCCHHHHHHHHHhcCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999996

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.9e-11  Score=76.73  Aligned_cols=42  Identities=26%  Similarity=0.482  Sum_probs=40.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECG-KRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSC-CCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCC-cccCCHHHHHHHHHhcCCCCCCCCC
Confidence            588899999999999999 99999999999999 9999999996

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=76.88  Aligned_cols=42  Identities=26%  Similarity=0.438  Sum_probs=40.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECG-KAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSC-CEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999996

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.2e-11  Score=76.52  Aligned_cols=42  Identities=26%  Similarity=0.423  Sum_probs=40.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECG-KAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSC-CEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCC-cccCCHHHHHHHHhHhCCCCCCCCC
Confidence            588899999999999999 99999999999999 9999999996

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.8e-11  Score=76.31  Aligned_cols=39  Identities=23%  Similarity=0.535  Sum_probs=32.4

Q ss_pred             Hh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          293 EK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       293 ~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      ++ |++++||.|. |++.|.+...|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45 7888888888 888888888888888888888888885

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=76.48  Aligned_cols=39  Identities=23%  Similarity=0.598  Sum_probs=30.4

Q ss_pred             Hh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          293 EK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       293 ~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      .+ |++++||.|. |++.|.+...|..|+++|++++||.|-
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            44 7777888888 888888888888888888888888773

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.4e-11  Score=76.40  Aligned_cols=42  Identities=29%  Similarity=0.400  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|...+.|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECG-KVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSC-CBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCC-cccCCHHHHHHHHHhhCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.6e-11  Score=76.35  Aligned_cols=42  Identities=24%  Similarity=0.439  Sum_probs=39.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECG-KVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTC-CBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            588899999999999999 99999999999999 9999999996

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.2e-11  Score=75.76  Aligned_cols=42  Identities=26%  Similarity=0.476  Sum_probs=40.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|.++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQ-ATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTC-CEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCC-CccCCHHHHHHHHHHcCCCCCcCCC
Confidence            688899999999999999 99999999999999 9999999995

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=75.86  Aligned_cols=42  Identities=29%  Similarity=0.418  Sum_probs=39.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECG-KVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTT-EECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCC-CccCCHHHHHHHHHHcCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999995

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.09  E-value=4e-11  Score=76.65  Aligned_cols=42  Identities=31%  Similarity=0.506  Sum_probs=39.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECG-KSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSS-CEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999996

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.3e-11  Score=76.46  Aligned_cols=42  Identities=31%  Similarity=0.474  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECG-KAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSC-CCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCC-cccCCHHHHHHHHHHcCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.1e-11  Score=76.61  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=39.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECR-KTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSC-CCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcC-chhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999996

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.7e-11  Score=73.87  Aligned_cols=36  Identities=28%  Similarity=0.676  Sum_probs=28.8

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++++||.|+ |++.|.+.+.|..|+++|++++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            7777888887 88888888888888888888888776

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.2e-11  Score=76.03  Aligned_cols=42  Identities=29%  Similarity=0.480  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECG-KSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSC-CEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCC-hhhCChHHHHHHHHhcCCCCCcCCC
Confidence            478889999999999999 99999999999999 9999999996

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.6e-11  Score=75.46  Aligned_cols=42  Identities=31%  Similarity=0.447  Sum_probs=39.5

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECG-KAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTC-CCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCC-CccCCHHHHHHHhhhcCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999995

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.3e-11  Score=76.49  Aligned_cols=42  Identities=29%  Similarity=0.455  Sum_probs=40.0

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCG-KAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSC-CEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccC-CccCCHhHHHHHHHHcCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999996

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=74.35  Aligned_cols=41  Identities=29%  Similarity=0.361  Sum_probs=38.3

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      |+++|.++++|.|..|+ +.|...+.|..|++ |++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECK-ETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTC-CBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCC-CccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56788899999999999 99999999999999 9999999984

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.7e-11  Score=76.25  Aligned_cols=42  Identities=29%  Similarity=0.445  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECG-KAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSC-CEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccC-ChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.08  E-value=7.7e-11  Score=74.22  Aligned_cols=37  Identities=19%  Similarity=0.399  Sum_probs=31.9

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |++++||.|. |++.|.+.+.|..|+++|++++||.|.
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            7888888888 888888888888888888888888884

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5e-11  Score=76.16  Aligned_cols=42  Identities=31%  Similarity=0.473  Sum_probs=39.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECG-KAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTT-CCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCC-hhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999996

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.3e-11  Score=76.09  Aligned_cols=42  Identities=33%  Similarity=0.509  Sum_probs=39.6

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCG-KEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSC-CBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCC-cccCCHHHHHHHHHHcCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.4e-11  Score=75.96  Aligned_cols=42  Identities=29%  Similarity=0.452  Sum_probs=39.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCG-KSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSC-CCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCC-chhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999996

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.2e-11  Score=74.85  Aligned_cols=41  Identities=29%  Similarity=0.421  Sum_probs=38.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      +|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCG-KAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTT-CCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCcc-chhCCHHHHHHHHHHhCCCCCCCC
Confidence            478889999999999999 99999999999999 999999988

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.5e-11  Score=76.40  Aligned_cols=42  Identities=24%  Similarity=0.365  Sum_probs=39.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCG-KAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTT-EEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccC-hhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999996

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6e-11  Score=76.06  Aligned_cols=43  Identities=26%  Similarity=0.320  Sum_probs=40.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh--ccCCCCeeec-c
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSKWQCS-C  305 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~~~C~-C  305 (335)
                      +|+++|.++++|.|..|+ +.|.....|+.|++  |++++||.|+ |
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECG-KAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSC-CCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccC-chhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            588899999999999999 99999999999998  9999999998 7

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.9e-11  Score=74.59  Aligned_cols=41  Identities=27%  Similarity=0.441  Sum_probs=38.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      .|+++|++++||.|..|+ +.|.....|..|++ |++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCG-ARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSSCSEECTTTC-CEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCcccCCCCCEeCCCcC-hhhCCHHHHHHHHHHcCCCCCCCC
Confidence            377889999999999999 99999999999999 999999988

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.8e-11  Score=75.80  Aligned_cols=42  Identities=26%  Similarity=0.458  Sum_probs=39.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECG-KAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSC-CEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCC-CccCCHHHHHHHHHHcCCCCCCCCC
Confidence            478899999999999999 99999999999999 9999999996

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.4e-11  Score=75.12  Aligned_cols=42  Identities=29%  Similarity=0.503  Sum_probs=39.6

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQ-KAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTC-CEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCC-cccCCHhHHHHHHHHhCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999995

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5.6e-11  Score=75.86  Aligned_cols=42  Identities=26%  Similarity=0.451  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQ-KAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSC-CEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999995

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=5e-11  Score=76.17  Aligned_cols=42  Identities=29%  Similarity=0.411  Sum_probs=39.6

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECG-KVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSC-CCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCC-cccCChhHHHHHhHhcCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=5.1e-11  Score=75.35  Aligned_cols=42  Identities=19%  Similarity=0.356  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|++++||.|..|+ +.|.....|..|++ |++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCD-RVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSS-CEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCC-chhCCHHHHHHHhHhcCCCCCCCCC
Confidence            578889999999999999 99999999999999 9999999995

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.8e-11  Score=76.20  Aligned_cols=42  Identities=29%  Similarity=0.444  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECG-KAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTC-CEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCC-CCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=6.4e-11  Score=75.67  Aligned_cols=42  Identities=26%  Similarity=0.494  Sum_probs=39.6

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECK-KTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTC-CBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccC-cccCCHHHHHHHHHHcCCCCCCCCC
Confidence            477889999999999999 99999999999999 9999999996

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.06  E-value=1.7e-11  Score=83.98  Aligned_cols=52  Identities=17%  Similarity=0.398  Sum_probs=46.3

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHH
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLM  316 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~  316 (335)
                      +.|++.|++++||.|+.|| +.|.....|.   + |++++||.|+ ||+.|.....+.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~-k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCS-STFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSC-CEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhHHHHcCCCCCccCCCCC-chhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            4688899999999999999 9999998886   7 9999999999 999998876543

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.7e-11  Score=75.95  Aligned_cols=42  Identities=31%  Similarity=0.442  Sum_probs=39.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|.++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCG-KAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSC-CBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCCCCC-cccCcHHHHHHHHHhcCCCCCCCCC
Confidence            467888999999999999 99999999999999 9999999996

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.06  E-value=7.6e-11  Score=74.96  Aligned_cols=40  Identities=25%  Similarity=0.390  Sum_probs=25.3

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CG  306 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~  306 (335)
                      .|+++++|.|..|+ +.|.....|..|++ |+++++|.|+ ||
T Consensus         4 ~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCG-LRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTT-EECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCC-cccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            34555666666666 66666666666666 6666666666 64

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.05  E-value=1.2e-10  Score=80.05  Aligned_cols=39  Identities=21%  Similarity=0.400  Sum_probs=32.2

Q ss_pred             ccCCCCeee--c-cCccccCHHHHHHHH-hhhcCCCCcccCCC
Q 042026          295 HCGDSKWQC--S-CGTTFSRKDKLMGHV-ALFVGHTPAVNVNS  333 (335)
Q Consensus       295 H~g~~~~~C--~-C~~~F~~~~~L~~H~-~~H~gekp~~c~~~  333 (335)
                      ++|+|||.|  + |+++|.+.+.|.+|+ ++|+|+|||.|++.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~   64 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEV   64 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccccc
Confidence            578888888  4 888888888888886 68888888888874

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.2e-11  Score=75.40  Aligned_cols=36  Identities=22%  Similarity=0.547  Sum_probs=19.0

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++++||.|. |++.|.+...|..|+++|++++||.|
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ep0_A            7 GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP   43 (46)
T ss_dssp             STTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSC
T ss_pred             CCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCC
Confidence            4555555555 55555555555555555555555554

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=75.41  Aligned_cols=42  Identities=29%  Similarity=0.411  Sum_probs=39.8

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +.++|+++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         3 ~~~~h~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            3 SGSSGTGEKPYKCDVCH-KSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSTTCCSEECSSSC-CEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCeeCcccC-cccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            46788999999999999 99999999999999 9999999998 7

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=75.37  Aligned_cols=42  Identities=36%  Similarity=0.502  Sum_probs=39.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCG-KAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTT-EECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCC-hhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=7.1e-11  Score=75.46  Aligned_cols=42  Identities=29%  Similarity=0.449  Sum_probs=39.5

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|.+|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~h~~~h~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCR-KAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTC-CBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcC-chhCCHHHHHHHHHHhCCCCCCCCC
Confidence            477889999999999999 99999999999999 9999999996

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.05  E-value=8.5e-11  Score=73.39  Aligned_cols=40  Identities=20%  Similarity=0.350  Sum_probs=38.0

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      |+++|.++++|.|..|+ +.|...+.|+.|++ |++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~-k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCG-KSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSC-CEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCC-cccCCHHHHHHHhhhcCCCCCCCC
Confidence            67788899999999999 99999999999999 999999998

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=7e-11  Score=73.87  Aligned_cols=40  Identities=28%  Similarity=0.467  Sum_probs=38.1

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      |+++|.++++|.|..|+ +.|...+.|+.|++ |++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICG-TRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSC-CCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCC-CccCCHHHHHHHHHhcCCCCCCCC
Confidence            67888999999999999 99999999999999 999999988

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.9e-11  Score=75.40  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=40.2

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +.|+++|+++++|.|..|+ +.|...+.|..|++ |++++||.|.
T Consensus         1 ~~H~~~H~~~~~~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            1 GSSGSSGTDSKSYNCNECG-KAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCCEEETTTT-EEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCcCCCCCCCeECcccC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3688899999999999999 99999999999999 9999999984

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.03  E-value=1.1e-10  Score=75.29  Aligned_cols=41  Identities=22%  Similarity=0.461  Sum_probs=33.8

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCc
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGT  307 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~  307 (335)
                      .|..+++|.|.+|+ +.|.....|..|++ |++++||.|. |++
T Consensus         6 ~~~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICG-KIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTT-EEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCC-cccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            34556888888888 88888888888888 8888888888 875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.5e-11  Score=75.67  Aligned_cols=42  Identities=21%  Similarity=0.331  Sum_probs=39.7

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|.++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECG-KGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSC-CCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCC-cccCCHHHHHHHHHHhCCCCCCCCC
Confidence            478889999999999999 99999999999999 9999999996

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=6e-11  Score=75.79  Aligned_cols=42  Identities=24%  Similarity=0.267  Sum_probs=39.9

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECG-MNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSC-CEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccC-hhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            578899999999999999 99999999999999 9999999996

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1.2e-10  Score=73.65  Aligned_cols=42  Identities=24%  Similarity=0.324  Sum_probs=39.1

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|+++|.++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         2 ~h~~~h~~~~~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECG-KIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTC-CCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCC-cccCCHHHHHHHHHHHCCCCCCCCC
Confidence            367888899999999999 99999999999999 9999999995

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=8.5e-11  Score=75.10  Aligned_cols=36  Identities=31%  Similarity=0.560  Sum_probs=20.8

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++++||.|. |++.|.+.+.|..|+++|++++||.|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP   43 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            5555555555 55555555555555555555555555

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.5e-10  Score=73.14  Aligned_cols=42  Identities=31%  Similarity=0.384  Sum_probs=39.4

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +|+++|+++++|.|.+|+ +.|...+.|..|++ |++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECG-KAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSC-CEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCC-cccCchHHHHHHHhHhcCCCCCCCC
Confidence            588899999999999999 99999999999999 9999999873

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.01  E-value=2e-10  Score=70.56  Aligned_cols=36  Identities=19%  Similarity=0.422  Sum_probs=31.3

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCccc
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVN  330 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c  330 (335)
                      |++++||.|. ||+.|.+.+.|..|+++|+|++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            6788899999 99999999999999999999999876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.01  E-value=3.6e-10  Score=79.46  Aligned_cols=54  Identities=31%  Similarity=0.754  Sum_probs=48.2

Q ss_pred             CCcceeccc--ccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccce
Q 042026          186 AKYTHYCQV--CGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNH  263 (335)
Q Consensus       186 ~~~~~~C~~--C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h  263 (335)
                      ..++|.|.+  |++.|.....|+.|+++|.++                                                
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~------------------------------------------------   45 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE------------------------------------------------   45 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHHHHHHHHSSS------------------------------------------------
T ss_pred             ccCceeCCCCCCccccCCHHHHHHHHHhcCCC------------------------------------------------
Confidence            557799988  999999999999999999887                                                


Q ss_pred             eeeeeCCcceeccc--CCCccCCCHHHHHHHHh-c
Q 042026          264 YKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-H  295 (335)
Q Consensus       264 ~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H  295 (335)
                             ++|.|.+  |+ +.|.....|.+|++ |
T Consensus        46 -------~~~~C~~~~C~-k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           46 -------KPFSCSWKGCE-RRFARSDELSRHRRTH   72 (72)
T ss_dssp             -------CSEECCCTTCC-CEESSHHHHHHHTTTC
T ss_pred             -------CCccCCCCCCC-cccCCHHHHHhHhhcC
Confidence                   7888864  99 99999999999987 6

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.1e-10  Score=74.50  Aligned_cols=42  Identities=26%  Similarity=0.411  Sum_probs=39.5

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccC-CCCeeec
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG-DSKWQCS  304 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g-~~~~~C~  304 (335)
                      .|+++|.+++||.|..|+ +.|...+.|..|++ |++ ++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCE-KTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSC-CEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCC-CcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            478889999999999999 99999999999999 999 9999995

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=9.2e-11  Score=74.93  Aligned_cols=41  Identities=27%  Similarity=0.271  Sum_probs=38.3

Q ss_pred             eeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          264 YKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       264 ~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      +++|.++++|.|..|+ +.|.....|+.|++ |++++||.|+ |
T Consensus         4 ~~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECG-KSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSC-CCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCC-cccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4577888999999999 99999999999999 9999999998 7

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.1e-10  Score=83.24  Aligned_cols=64  Identities=23%  Similarity=0.485  Sum_probs=57.2

Q ss_pred             cceeeeeeCCcceecccCCCccCCCHHHHHHHHhccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          261 KNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       261 k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      ..|++.+.++++|.|..|+ +.|. ...|..|+.|++++||.|+ |++.|.+ ..|..|+++|.+++.
T Consensus         6 ~~H~~~~c~~r~~~C~~C~-~~~~-~~~L~~H~~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQHCD-LELS-ILKLKEHEDYCGARTELCGNCGRNVLV-KDLKTHPEVCGREGS   70 (75)
T ss_dssp             SCCCCCCCCCCCEECSSSC-CEEC-HHHHHHHHHHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBSS
T ss_pred             HhhCcccCCCcccCCcccC-hHhh-HHHHHHHHhHcCCCceEcccCCCcCcH-HHHHHHHHHccCCcC
Confidence            3577778888999999999 9994 9999999889999999999 9999885 899999999998753

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2.4e-10  Score=72.54  Aligned_cols=41  Identities=27%  Similarity=0.493  Sum_probs=38.1

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +.++|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECTHCG-KSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEETTTT-EEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCCCCC-CccCChHHHHHHHHHhCCCCCCCCC
Confidence            45678889999999999 99999999999999 9999999995

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.97  E-value=3.8e-10  Score=71.61  Aligned_cols=38  Identities=29%  Similarity=0.596  Sum_probs=36.5

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |++++||.|. |++.|.+++.|..|+++|++++||.|..
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~   43 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPS   43 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcC
Confidence            8999999999 9999999999999999999999999964

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=3.2e-10  Score=72.89  Aligned_cols=42  Identities=24%  Similarity=0.342  Sum_probs=28.0

Q ss_pred             eeeeeeCCcceecc--cCCCccCCCHHHHHHHHh-ccCCCCeeec-c
Q 042026          263 HYKRSHCPKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKWQCS-C  305 (335)
Q Consensus       263 h~~~h~~~k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C  305 (335)
                      |.++|+++++|.|.  .|+ +.|.....|..|++ |++++||.|. |
T Consensus         3 ~~~~H~~~k~~~C~~~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCG-WRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCC-CEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCC-CccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34556666667776  677 77777777777776 7777777666 5

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=3.1e-10  Score=72.47  Aligned_cols=41  Identities=24%  Similarity=0.349  Sum_probs=38.0

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .++.|+++++|.|..|+ +.|.....|+.|++ |++++||.|+
T Consensus         3 ~~~~h~~~k~~~C~~C~-k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCG-KFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCSSSC-CCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCCCCC-CeeCChHHHHHHHHHhCCCCCCCCC
Confidence            35678889999999999 99999999999999 9999999996

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.95  E-value=1.3e-10  Score=77.08  Aligned_cols=39  Identities=18%  Similarity=0.159  Sum_probs=32.6

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCee
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQ  302 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~  302 (335)
                      |+++|+++++|.|..|| +.|...+.|..|++ |+|++||.
T Consensus        15 h~~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           15 PRSRSQSEQPATCPICY-AVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CHHHHTSSCCEECTTTC-CEESSHHHHHHHHHHHTTTSCCC
T ss_pred             HHHhcCCCCCccCCCCC-cccCCHHHHHHHHHHhccCCCCC
Confidence            33344444899999999 99999999999999 99999984

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.93  E-value=4e-11  Score=88.23  Aligned_cols=63  Identities=16%  Similarity=0.301  Sum_probs=53.7

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC-------CCCccc
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG-------HTPAVN  330 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g-------ekp~~c  330 (335)
                      +.++|+++++|.|..|+ +.|.....|..|++ |++++||.|. |.    +...|..|.++|.|       |.|+.|
T Consensus        16 ~~~~H~~~kpy~C~~C~-k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~   87 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCD-SKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGAFADFKQESGPSS   87 (88)
T ss_dssp             CCCSCCCCSCEECSSSC-CEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCSSSCCCCCCCCCC
T ss_pred             cccccCCCCCCcCCCCC-CEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccccccccccCCCCC
Confidence            34568889999999999 99999999999999 9999999998 75    34557788899988       667765

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=4.3e-10  Score=69.81  Aligned_cols=38  Identities=29%  Similarity=0.562  Sum_probs=35.5

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      ++|+++++|.|..|+ +.|.....|+.|++ |++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECG-KSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSC-CEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCC-CCcCCHHHHHHHHHHhCCCCCcCC
Confidence            457788999999999 99999999999999 999999988

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.4e-10  Score=67.58  Aligned_cols=33  Identities=15%  Similarity=0.391  Sum_probs=28.2

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      |++++||.|. |++.|.+.+.|..|+++|++++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            7888888888 88888888888888888888876

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.91  E-value=5.4e-10  Score=70.22  Aligned_cols=39  Identities=23%  Similarity=0.385  Sum_probs=36.1

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      +.|+++++|.|..|+ +.|.....|..|++ |++++||.|+
T Consensus         3 ~~h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            3 SGSSGNGAFFCNECD-CRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCSSSCCBCCSSSC-CCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             cCcCCCCCEECCCCC-CeeCChHHHHHHHHhhCCCCCccCC
Confidence            457788999999999 99999999999999 9999999995

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=1.1e-09  Score=70.62  Aligned_cols=38  Identities=21%  Similarity=0.305  Sum_probs=36.0

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |.++++|.|. |++.|.+...|..|+++|++++||.|..
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGP   45 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCC
Confidence            7889999999 9999999999999999999999999964

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1.4e-09  Score=72.03  Aligned_cols=33  Identities=36%  Similarity=0.606  Sum_probs=29.1

Q ss_pred             cCCCcceecccccccccCcHHHHHHHH-HhcCCC
Q 042026          184 LLAKYTHYCQVCGKGFKRDANLRMHMR-AHGDEY  216 (335)
Q Consensus       184 ~~~~~~~~C~~C~k~f~~~~~L~~H~r-~H~~~~  216 (335)
                      ..++++|.|.+|++.|.....|+.|++ +|.+++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k   40 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSER   40 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCC
Confidence            346789999999999999999999997 898883

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=9.2e-10  Score=70.69  Aligned_cols=40  Identities=30%  Similarity=0.557  Sum_probs=37.4

Q ss_pred             HHh-ccCCCCeeec---cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          292 HEK-HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       292 H~~-H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |.+ |++++||.|.   |++.|.+...|..|+++|++++||.|.
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   46 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS   46 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            557 9999999994   999999999999999999999999995

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.86  E-value=1.6e-09  Score=64.41  Aligned_cols=33  Identities=24%  Similarity=0.487  Sum_probs=26.1

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      |++++||.|. |++.|.+.+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            5677788888 88888888888888888887765

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.86  E-value=1e-09  Score=66.26  Aligned_cols=34  Identities=29%  Similarity=0.489  Sum_probs=26.1

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |++ |++++||.|+ |++.|.+.+.|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            566 7777778887 888888888888887777764

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.85  E-value=2e-09  Score=64.11  Aligned_cols=33  Identities=18%  Similarity=0.462  Sum_probs=25.5

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      |++++||.|. |++.|.+.+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            5677778887 88888888888888888877765

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.78  E-value=4.3e-09  Score=61.97  Aligned_cols=31  Identities=29%  Similarity=0.489  Sum_probs=22.6

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                      +||.|+ ||+.|.+.+.|..|+++|+|++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            467777 7777777777777777777777764

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.77  E-value=4.5e-09  Score=63.82  Aligned_cols=35  Identities=23%  Similarity=0.376  Sum_probs=26.3

Q ss_pred             ccCCCCeeec---cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          295 HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       295 H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                      |+|++||.|.   |++.|.+.+.|.+|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            5677777776   7777777777777777777777763

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.73  E-value=4.5e-09  Score=64.28  Aligned_cols=36  Identities=25%  Similarity=0.475  Sum_probs=32.7

Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      |+++++|.|..|| +.|...+.|..|++ |++++||.+
T Consensus         1 h~~~k~~~C~~C~-k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCK-REFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTC-CEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCC-cccCCHHHHHHHHHHcCCCcccee
Confidence            4567999999999 99999999999999 999999875

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.71  E-value=7.2e-09  Score=71.20  Aligned_cols=38  Identities=24%  Similarity=0.325  Sum_probs=34.3

Q ss_pred             eeeCCcceeccc--CCCccCCCHHHHHHHH-h-ccCCCCeeec
Q 042026          266 RSHCPKMYVCKR--CNRKQFSVLSDLRTHE-K-HCGDSKWQCS  304 (335)
Q Consensus       266 ~h~~~k~y~C~~--C~~k~F~~~~~L~~H~-~-H~g~~~~~C~  304 (335)
                      ..+++|||+|..  |+ |+|...++|.+|+ + |++++||.|.
T Consensus        21 ~~sGEKPYkC~~~~Cg-KaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCF-AAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SSCSSCSCBCCSTTCC-CBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             cccCCCCeECCCCCcC-hhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            556789999975  99 9999999999998 6 9999999995

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.1e-08  Score=61.18  Aligned_cols=32  Identities=19%  Similarity=0.387  Sum_probs=24.6

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |++++||.|. |++.|.....|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            6677778887 8888888888888887777764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=1.2e-08  Score=62.27  Aligned_cols=31  Identities=19%  Similarity=0.344  Sum_probs=20.4

Q ss_pred             ccCCCCeeec---cCccccCHHHHHHHHhhhcCC
Q 042026          295 HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       295 H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |+|++||.|+   |+++|.+++.|.+|+++|+|+
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4566666663   666666666666666666665

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1e-08  Score=61.34  Aligned_cols=32  Identities=13%  Similarity=0.239  Sum_probs=23.2

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |++++||.|. |++.|.+.+.|..|+++|++++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            6667777777 7777777777777777777654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=9.2e-09  Score=62.00  Aligned_cols=32  Identities=19%  Similarity=0.393  Sum_probs=24.3

Q ss_pred             ccCCCCeeec-cCccccCH-HHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRK-DKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~-~~L~~H~~~H~gek  326 (335)
                      |++++||.|+ |++.|.+. +.|..|+++|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            4 GSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            6777777777 77777777 77777777777764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.3e-08  Score=60.83  Aligned_cols=32  Identities=19%  Similarity=0.369  Sum_probs=24.4

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |++++||.|. |++.|.+.+.|..|+++|+++|
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            6777777777 7777777777777777777764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.1e-08  Score=61.62  Aligned_cols=35  Identities=23%  Similarity=0.421  Sum_probs=32.3

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSK  300 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~  300 (335)
                      +.|.++++|.|..|+ +.|.....|..|++ |++++|
T Consensus         2 ~~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCE-KSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTT-EECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCC-CccCCHHHHHHHHHHHcCCCC
Confidence            467888999999999 99999999999999 999876

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.6e-08  Score=60.42  Aligned_cols=32  Identities=25%  Similarity=0.495  Sum_probs=24.1

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |++++||.|. |++.|.+...|..|+++|++++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            5677777777 7777777777777777777764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.64  E-value=1.1e-08  Score=61.83  Aligned_cols=31  Identities=19%  Similarity=0.281  Sum_probs=22.4

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHH-HhhhcCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGH-VALFVGH  325 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H-~~~H~ge  325 (335)
                      |++++||.|+ |++.|.+++.|..| +++|+|+
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            6677777777 77777777777777 6777654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.64  E-value=1.3e-08  Score=61.21  Aligned_cols=36  Identities=28%  Similarity=0.412  Sum_probs=32.8

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      .|++.|++++||.|+.|+ +.|.....|..|++ |+|+
T Consensus         1 ~H~~~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCD-RSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTC-CCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCC-cccCcHHHHHHHHHHhccC
Confidence            367888899999999999 99999999999999 9874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=2.3e-08  Score=59.79  Aligned_cols=32  Identities=19%  Similarity=0.484  Sum_probs=25.2

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |.+++||.|+ |++.|.+...|..|+++|+++|
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5677788888 8888888888888888887764

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.62  E-value=1.7e-08  Score=59.33  Aligned_cols=32  Identities=22%  Similarity=0.306  Sum_probs=29.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      |||.|..|| +.|...+.|..|++ |+|++||.+
T Consensus         1 kp~~C~~C~-k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECP-KRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSC-CCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCC-chhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999 99999999999999 999999863

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.61  E-value=2.5e-08  Score=59.08  Aligned_cols=33  Identities=33%  Similarity=0.535  Sum_probs=30.6

Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCCCC
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSK  300 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~  300 (335)
                      |+++++|.|..|+ +.|...+.|+.|++ |++++|
T Consensus         2 h~~~k~~~C~~C~-k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCL-KKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSC-CEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCc-chhCCHHHHHHHHHHHcCCCC
Confidence            5678999999999 99999999999999 999875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.60  E-value=2.5e-09  Score=72.97  Aligned_cols=41  Identities=15%  Similarity=0.252  Sum_probs=37.0

Q ss_pred             HHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          289 LRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       289 L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |..|++ |+|++||.|+ ||+.|...+.|.   ++|+|++||.|..
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~   44 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTF   44 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCC
Confidence            457899 9999999999 999999999887   8999999999853

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.59  E-value=3.1e-08  Score=58.72  Aligned_cols=34  Identities=24%  Similarity=0.440  Sum_probs=31.0

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSK  300 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~  300 (335)
                      +|.++++|.|..|+ +.|...+.|..|++ |++++|
T Consensus         1 ~H~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICL-SAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSC-CEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCC-cccCCHHHHHHHHHHcCCCCC
Confidence            36678999999999 99999999999999 999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.58  E-value=2.4e-08  Score=64.26  Aligned_cols=33  Identities=21%  Similarity=0.471  Sum_probs=25.8

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHh-hhcCCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVA-LFVGHTP  327 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~-~H~gekp  327 (335)
                      |+|++||.|. |++.|.+...|..|++ +|+|+.+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            6788888888 8888888888888888 8887754

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.57  E-value=5.2e-09  Score=76.80  Aligned_cols=41  Identities=15%  Similarity=0.331  Sum_probs=37.8

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcccCC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAVNVN  332 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~c~~  332 (335)
                      |.+ |++++||.|. |++.|.+.+.|..|+++|++++||.|..
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~   58 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKR   58 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCC
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccch
Confidence            345 9999999999 9999999999999999999999999953

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.54  E-value=9.6e-09  Score=65.77  Aligned_cols=36  Identities=19%  Similarity=0.481  Sum_probs=25.4

Q ss_pred             HHHh-ccCCCCeee--c-cCccccCHHHHHHHHhhhcCCC
Q 042026          291 THEK-HCGDSKWQC--S-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       291 ~H~~-H~g~~~~~C--~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      .|.. |++++||.|  + ||+.|.+.+.|..|+++|+|+|
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3444 777777777  4 7777777777777777777764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.53  E-value=2.9e-09  Score=62.24  Aligned_cols=30  Identities=23%  Similarity=0.410  Sum_probs=20.6

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCCCc
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHTPA  328 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~  328 (335)
                      +||.|. ||+.|.+.+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            466676 777777777777777777777665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.51  E-value=6.2e-08  Score=58.39  Aligned_cols=32  Identities=19%  Similarity=0.523  Sum_probs=20.3

Q ss_pred             ccCCCCeeec---cCccccCHHHHHHHHhhhcCCC
Q 042026          295 HCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       295 H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |++++||.|.   ||+.|.+.+.|..|+++|+|+|
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            5566666664   6666666666666666666653

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.49  E-value=4.7e-08  Score=58.74  Aligned_cols=24  Identities=29%  Similarity=0.648  Sum_probs=15.6

Q ss_pred             cCCCCeeec-cCccccCHHHHHHHH
Q 042026          296 CGDSKWQCS-CGTTFSRKDKLMGHV  319 (335)
Q Consensus       296 ~g~~~~~C~-C~~~F~~~~~L~~H~  319 (335)
                      .|++||.|+ ||++|.+++.|.+|+
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CCccCeECCCCCCccCCHhHccCcC
Confidence            456666666 666666666666665

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=8.7e-08  Score=58.38  Aligned_cols=32  Identities=19%  Similarity=0.283  Sum_probs=28.8

Q ss_pred             eeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCC
Q 042026          267 SHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       267 h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      ++++|||+|..  |+ |+|...+.|++|++ |+|+.
T Consensus         4 ~~gekp~~C~~~~C~-k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            4 GSSGILLKCPTDGCD-YSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             SSCCCCEECSSSSCC-CEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCC-CccCCHHHHHHHHHhcCCCC
Confidence            56789999986  99 99999999999999 99863

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=1e-07  Score=53.96  Aligned_cols=29  Identities=28%  Similarity=0.543  Sum_probs=19.7

Q ss_pred             CCCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          298 DSKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       298 ~~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      ++||.|. ||+.|.....|..|+++|+|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            3567777 7777777777777777776654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=7.1e-08  Score=58.31  Aligned_cols=34  Identities=24%  Similarity=0.467  Sum_probs=31.1

Q ss_pred             eeCCcceecc--cCCCccCCCHHHHHHHHh-ccCCCCe
Q 042026          267 SHCPKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDSKW  301 (335)
Q Consensus       267 h~~~k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~~~  301 (335)
                      |+++++|.|.  .|+ +.|...+.|+.|++ |++++||
T Consensus         1 H~~~k~~~C~~~~C~-k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCG-QRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTC-CEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCC-cccCCHHHHHHHHHHhCCCCCC
Confidence            4567999999  599 99999999999999 9999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1e-07  Score=56.79  Aligned_cols=33  Identities=21%  Similarity=0.361  Sum_probs=30.0

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|.+++||.|..|+ +.|...+.|..|++ |++++
T Consensus         3 ~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            3 SGSSGLLYDCHICE-RKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CSCCCCCEECSSSC-CEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCeECCCCC-CccCCHHHHHHHHHHhcCCC
Confidence            46778999999999 99999999999999 99874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=9.7e-08  Score=57.32  Aligned_cols=34  Identities=26%  Similarity=0.356  Sum_probs=30.6

Q ss_pred             eeeeCCcceecccCCCccCCCH-HHHHHHHh-ccCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVL-SDLRTHEK-HCGDS  299 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~-~~L~~H~~-H~g~~  299 (335)
                      ++|.++++|.|..|+ +.|... +.|..|++ |++++
T Consensus         2 ~~h~~~k~~~C~~C~-k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCD-FYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSS-CEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCC-hhhccCHHHHHHHHHhcCCCC
Confidence            357788999999999 999999 99999999 99874

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.42  E-value=1.2e-07  Score=53.40  Aligned_cols=28  Identities=32%  Similarity=0.621  Sum_probs=18.4

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +||.|+ ||+.|.+.+.|..|+++|+|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            456666 6666666666666666666653

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.41  E-value=1.7e-07  Score=52.63  Aligned_cols=28  Identities=21%  Similarity=0.557  Sum_probs=19.4

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +||.|+ |++.|.+.+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            466777 7777777777777777776654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.4e-07  Score=56.06  Aligned_cols=33  Identities=24%  Similarity=0.562  Sum_probs=30.1

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|.++++|.|..|+ +.|.....|..|++ |++++
T Consensus         3 ~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            3 SGSSGKPYKCPQCS-YASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CSCCCCSEECSSSS-CEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCC-cccCCHHHHHHHHHHccCCC
Confidence            46778999999999 99999999999999 99874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=1.4e-07  Score=56.22  Aligned_cols=33  Identities=21%  Similarity=0.415  Sum_probs=30.1

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|.+++||.|..|+ +.|...+.|..|++ |++++
T Consensus         3 ~h~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            3 SGSSGKPFKCSLCE-YATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             SSCCCCSEECSSSS-CEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCccCCCCC-chhCCHHHHHHHHHHhccCC
Confidence            46778999999999 99999999999999 98864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.1e-07  Score=57.26  Aligned_cols=33  Identities=18%  Similarity=0.381  Sum_probs=30.0

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHH-Hh-ccCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTH-EK-HCGD  298 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H-~~-H~g~  298 (335)
                      ++|++++||.|..|+ +.|...+.|+.| ++ |+++
T Consensus         2 ~~H~~~k~~~C~~C~-k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCH-YSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSS-CEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCC-cccCCHHHHHHHHHHHccCc
Confidence            467888999999999 999999999999 88 9875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.40  E-value=1.8e-07  Score=64.41  Aligned_cols=31  Identities=29%  Similarity=0.440  Sum_probs=16.6

Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      +..+|||+|..|+ |.|...+.|+.|++ |+++
T Consensus         8 ~~~ekpy~C~~Cg-K~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPCGLCG-KVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCCTTTC-CCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCCCCCC-CccCCHHHHHhhhhhhCCC
Confidence            3444555555555 55555555555555 5544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.38  E-value=1.8e-07  Score=52.43  Aligned_cols=28  Identities=25%  Similarity=0.679  Sum_probs=19.2

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +||.|. |++.|.....|..|+++|+|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            466777 7777777777777777776654

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=2.2e-07  Score=55.23  Aligned_cols=33  Identities=27%  Similarity=0.570  Sum_probs=30.0

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|.++++|.|..|+ +.|.....|..|++ |++++
T Consensus         3 ~h~~~~~~~C~~C~-k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCG-KKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTC-CBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCC-CCcCchHHHHHHHHHhcCCC
Confidence            46678999999999 99999999999999 99875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.36  E-value=2e-07  Score=52.64  Aligned_cols=29  Identities=17%  Similarity=0.350  Sum_probs=20.1

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      +||.|. ||+.|...+.|..|+++|++++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            356777 77777777777777777776654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.32  E-value=2.5e-08  Score=58.11  Aligned_cols=30  Identities=23%  Similarity=0.324  Sum_probs=28.6

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCe
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKW  301 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~  301 (335)
                      +||.|..|| +.|...+.|..|++ |++++||
T Consensus         1 kp~~C~~C~-k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACP-KRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSC-TTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCC-cccCCHHHHHHHHHHHccCCCC
Confidence            589999999 99999999999999 9999987

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.31  E-value=3.1e-07  Score=51.18  Aligned_cols=26  Identities=35%  Similarity=0.764  Sum_probs=15.5

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      +||.|+ |++.|.+.+.|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            456666 66666666666666665543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.31  E-value=2.1e-07  Score=52.08  Aligned_cols=28  Identities=18%  Similarity=0.600  Sum_probs=17.5

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +||.|+ |++.|.....|..|+++|+|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            356666 6666666666666666666553

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=7.7e-08  Score=54.27  Aligned_cols=28  Identities=32%  Similarity=0.737  Sum_probs=18.0

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +||.|. ||+.|.+.+.|..|+++|+|+|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            356666 6666666666666666666653

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.64  E-value=8e-08  Score=54.52  Aligned_cols=28  Identities=25%  Similarity=0.591  Sum_probs=18.6

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +||.|. ||+.|.+.+.|..|+++|+|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            566666 6666666666666766666653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=3.8e-07  Score=54.26  Aligned_cols=32  Identities=28%  Similarity=0.662  Sum_probs=29.0

Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      |..+++|.|..|+ +.|.....|..|++ |++++
T Consensus         4 ~~~~k~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            4 GSSGKIFTCEYCN-KVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TSCCCCEECTTTC-CEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCEECCCCC-ceeCCHHHHHHHHHHhCCCC
Confidence            4567999999999 99999999999999 99874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.29  E-value=3.6e-07  Score=50.66  Aligned_cols=24  Identities=13%  Similarity=0.416  Sum_probs=15.3

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhh
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      +||.|. ||+.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            566666 666666666666666655

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.28  E-value=4.5e-07  Score=50.12  Aligned_cols=24  Identities=17%  Similarity=0.378  Sum_probs=15.6

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhh
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      +||.|. ||+.|.+.+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            566666 666666666666666665

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.27  E-value=4.8e-07  Score=54.30  Aligned_cols=33  Identities=30%  Similarity=0.572  Sum_probs=29.4

Q ss_pred             eeeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCC
Q 042026          266 RSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       266 ~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|+++++|.|.+  || +.|...+.|+.|++ |+|++
T Consensus         2 ~~~~~k~~~C~~~~C~-k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCG-KVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCC-CEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCC-CccCCHHHHHHHHHhcCCCC
Confidence            366789999985  99 99999999999999 99875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.26  E-value=4.9e-08  Score=69.27  Aligned_cols=28  Identities=18%  Similarity=0.196  Sum_probs=20.4

Q ss_pred             CCcceecccccccccCcHHHHHHHHHhcCC
Q 042026          186 AKYTHYCQVCGKGFKRDANLRMHMRAHGDE  215 (335)
Q Consensus       186 ~~~~~~C~~C~k~f~~~~~L~~H~r~H~~~  215 (335)
                      ..+++.|..|++.|. ...|..|+ .|.++
T Consensus        14 ~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~   41 (75)
T 2d9k_A           14 PLRLAVCQHCDLELS-ILKLKEHE-DYCGA   41 (75)
T ss_dssp             CCCCEECSSSCCEEC-HHHHHHHH-HHHHH
T ss_pred             CCcccCCcccChHhh-HHHHHHHH-hHcCC
Confidence            566777888877774 77777777 67666

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.24  E-value=3.6e-07  Score=58.23  Aligned_cols=37  Identities=27%  Similarity=0.553  Sum_probs=32.7

Q ss_pred             ceeeeeeCCcceecc--cCCCccCCCHHHHHHHHh-ccCCC
Q 042026          262 NHYKRSHCPKMYVCK--RCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|+..|++++||.|.  .|| +.|...+.|+.|++ |+|++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~-k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCT-KTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCC-CEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCC-CccCCHHHHHHHHHHccCCC
Confidence            355678999999996  799 99999999999999 99875

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=7.2e-07  Score=50.24  Aligned_cols=29  Identities=31%  Similarity=0.490  Sum_probs=26.7

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      ++||.|..|| +.|.....|..|++ |++++
T Consensus         1 ~k~~~C~~C~-~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCG-RSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTC-CEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCC-cccCCHHHHHHHHHHhccCC
Confidence            4799999999 99999999999999 99874

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.23  E-value=6.7e-07  Score=53.63  Aligned_cols=27  Identities=30%  Similarity=0.543  Sum_probs=24.6

Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      +.++|||.|+.|| |+|.+.+.|++|+.
T Consensus         3 ~~gekp~~C~~Cg-K~F~~~s~L~~H~p   29 (36)
T 1fv5_A            3 LLKPARFMCLPCG-IAFSSPSTLEAHQA   29 (36)
T ss_dssp             SSSCCCCEETTTT-EECSCHHHHHHHHH
T ss_pred             CCCccCeECCCCC-CccCCHhHccCcCC
Confidence            4568999999999 99999999999984

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.23  E-value=5e-07  Score=49.76  Aligned_cols=25  Identities=24%  Similarity=0.593  Sum_probs=14.3

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhhcC
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      ||.|. |++.|.+.+.|..|+++|+|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35565 66666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.21  E-value=8.2e-07  Score=50.78  Aligned_cols=21  Identities=38%  Similarity=0.770  Sum_probs=10.5

Q ss_pred             cCccccCHHHHHHHHhhhcCC
Q 042026          305 CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       305 C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      ||+.|.+.+.|..|+++|+|+
T Consensus        10 C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A           10 CGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcccCCHhHHHHHHHHhcCC
Confidence            555555555555555555444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.20  E-value=7.1e-07  Score=50.00  Aligned_cols=28  Identities=25%  Similarity=0.458  Sum_probs=26.1

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +||.|..|| +.|...+.|..|++ |++++
T Consensus         1 k~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECP-KRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSS-CEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCC-chhCCHHHHHHHHHHhcCCC
Confidence            589999999 99999999999999 99874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.20  E-value=9e-07  Score=50.97  Aligned_cols=27  Identities=37%  Similarity=0.684  Sum_probs=14.2

Q ss_pred             cceecc--cCCCccCCCHHHHHHHHh-ccCC
Q 042026          271 KMYVCK--RCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       271 k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      +||.|.  .|+ +.|...+.|..|++ |+++
T Consensus         2 k~~~C~~~~C~-k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCD-KAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCC-CCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCC-CccCCHHHHHHHHHHccCC
Confidence            455555  455 55555555555555 5544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.19  E-value=5.1e-07  Score=51.08  Aligned_cols=26  Identities=31%  Similarity=0.837  Sum_probs=15.1

Q ss_pred             Ceeec-cCccccCHHHHHHH-HhhhcCC
Q 042026          300 KWQCS-CGTTFSRKDKLMGH-VALFVGH  325 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H-~~~H~ge  325 (335)
                      ||.|. ||+.|.+.+.|..| +++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45565 66666666666666 4555554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.18  E-value=7.7e-07  Score=56.97  Aligned_cols=34  Identities=24%  Similarity=0.460  Sum_probs=28.1

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh--ccCCCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSK  300 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~  300 (335)
                      +|+++|+|.|..|+ +.|.....|..|++  |+++.+
T Consensus         1 ~Ht~~kp~~C~~C~-k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICG-KRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTC-CEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcC-cccCCHHHHHHHhhhhcCCCCC
Confidence            36778999999999 99999999999998  888753

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.18  E-value=1e-06  Score=49.25  Aligned_cols=28  Identities=25%  Similarity=0.730  Sum_probs=25.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +||.|..|+ +.|...+.|..|++ |++++
T Consensus         1 k~~~C~~C~-~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCT-RAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTC-CBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCC-cccCCHHHHHHHHHHhcCCC
Confidence            589999999 99999999999999 98864

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=1.1e-06  Score=49.03  Aligned_cols=28  Identities=32%  Similarity=0.763  Sum_probs=26.1

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +||.|..|+ +.|.....|..|++ |++++
T Consensus         1 ~~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECG-KQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTS-CEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCC-CccCChhHHHHHHHHhcCCC
Confidence            589999999 99999999999999 99875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.12  E-value=1.5e-06  Score=48.30  Aligned_cols=27  Identities=37%  Similarity=0.794  Sum_probs=24.9

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      +++|.|..|+ +.|...+.|..|++ |+|
T Consensus         1 ~k~~~C~~C~-k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCG-KRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSC-CEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCC-cccCCHHHHHHHHHhcCC
Confidence            4799999999 99999999999999 875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.12  E-value=1.7e-06  Score=49.46  Aligned_cols=28  Identities=29%  Similarity=0.846  Sum_probs=25.8

Q ss_pred             cceecc--cCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCK--RCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +||.|.  .|| +.|...+.|..|++ |+|++
T Consensus         1 kp~~C~~~~C~-k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCG-KRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCC-CBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCC-cccCCHhHHHHHHHHhcCCC
Confidence            589998  999 99999999999999 99875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.11  E-value=1.6e-06  Score=49.90  Aligned_cols=29  Identities=24%  Similarity=0.587  Sum_probs=26.9

Q ss_pred             CCCeeec---cCccccCHHHHHHHHhhhcCCC
Q 042026          298 DSKWQCS---CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       298 ~~~~~C~---C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      ++||.|.   ||+.|.+.+.|..|+++|+|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5799996   9999999999999999999975

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.10  E-value=1.3e-06  Score=49.11  Aligned_cols=29  Identities=34%  Similarity=0.549  Sum_probs=26.5

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSK  300 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~  300 (335)
                      ++|.|..|+ +.|...+.|..|++ |+++++
T Consensus         1 k~~~C~~C~-k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCE-FRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSS-CCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCC-CccCCHHHHHHHHHHHccCCC
Confidence            579999999 99999999999999 988764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.10  E-value=1.2e-06  Score=48.77  Aligned_cols=28  Identities=36%  Similarity=0.740  Sum_probs=26.0

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +||.|..|+ +.|.....|..|++ |++++
T Consensus         1 k~~~C~~C~-~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCD-KKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCC-CCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCC-cccCCHHHHHHHHHHhccCC
Confidence            589999999 99999999999999 98874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.5e-06  Score=48.02  Aligned_cols=26  Identities=23%  Similarity=0.568  Sum_probs=24.1

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      ++||.|..|| +.|...+.|..|++ |+
T Consensus         1 ~k~~~C~~C~-k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCR-AGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTT-EEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCC-cccCCHHHHHHHHHhcC
Confidence            4799999999 99999999999999 74

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.36  E-value=4.4e-07  Score=50.99  Aligned_cols=28  Identities=36%  Similarity=0.646  Sum_probs=25.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +||.|..|| +.|...+.|..|++ |++++
T Consensus         1 k~~~C~~C~-k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCG-KAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            589999999 99999999999999 98864

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.08  E-value=1.9e-06  Score=59.21  Aligned_cols=33  Identities=21%  Similarity=0.339  Sum_probs=30.9

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTP  327 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp  327 (335)
                      |.+++||.|. |++.|.+++.|.+|+++|++++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            7889999999 99999999999999999998763

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.08  E-value=1.8e-06  Score=47.52  Aligned_cols=26  Identities=23%  Similarity=0.488  Sum_probs=24.1

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      ++||.|..|| +.|...+.|..|++ |+
T Consensus         1 ek~~~C~~C~-k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCP-QRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSS-CEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcC-hhhCCHHHHHHHHHHcc
Confidence            4799999999 99999999999999 74

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.4e-07  Score=49.29  Aligned_cols=24  Identities=25%  Similarity=0.717  Sum_probs=14.2

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhh
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      +||.|+ ||+.|.+.+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            355666 666666666666666555

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.32  E-value=5.7e-07  Score=50.81  Aligned_cols=29  Identities=38%  Similarity=0.772  Sum_probs=26.4

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      ++||.|..|| +.|...+.|..|++ |++++
T Consensus         1 ~k~~~C~~C~-k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQ-RQFADPGALQRHVRIHTGEK   30 (30)
Confidence            3789999999 99999999999999 98764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.01  E-value=3e-06  Score=46.46  Aligned_cols=26  Identities=31%  Similarity=0.632  Sum_probs=23.0

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      ||.|..|+ +.|...+.|..|++ |+++
T Consensus         1 ~~~C~~C~-k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCE-RSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSC-CBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCC-CcCCCHHHHHHHHHHcCCC
Confidence            68999999 99999999999999 9874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.98  E-value=3e-06  Score=47.72  Aligned_cols=28  Identities=39%  Similarity=0.742  Sum_probs=25.4

Q ss_pred             cceecccCCCccCCCHHHHHHH-Hh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTH-EK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H-~~-H~g~~  299 (335)
                      +||.|..|| +.|...+.|..| ++ |++++
T Consensus         1 k~~~C~~C~-k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCN-RAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTC-CBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccC-cccCChHHHHHHHHHHccCCC
Confidence            589999999 999999999999 67 98874

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.09  E-value=1.9e-06  Score=46.98  Aligned_cols=25  Identities=48%  Similarity=0.856  Sum_probs=23.2

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-cc
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |||.|..|| +.|...+.|..|++ |+
T Consensus         1 kp~~C~~C~-k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCG-KRFVQSSQLANHIRHHD   26 (26)
Confidence            589999999 99999999999998 74

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.74  E-value=1.2e-05  Score=44.63  Aligned_cols=27  Identities=26%  Similarity=0.614  Sum_probs=24.7

Q ss_pred             cceecc--cccccccCcHHHHHHHHHhcC
Q 042026          188 YTHYCQ--VCGKGFKRDANLRMHMRAHGD  214 (335)
Q Consensus       188 ~~~~C~--~C~k~f~~~~~L~~H~r~H~~  214 (335)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468999  999999999999999999874

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.74  E-value=1.6e-05  Score=44.09  Aligned_cols=26  Identities=38%  Similarity=0.875  Sum_probs=18.2

Q ss_pred             cceecc--cCCCccCCCHHHHHHHHh-ccC
Q 042026          271 KMYVCK--RCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       271 k~y~C~--~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      ++|.|.  .|+ +.|...+.|..|++ |+|
T Consensus         1 k~~~C~~~~C~-k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCG-RSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTC-EEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCc-CccCCHHHHHHHHHHhCC
Confidence            467777  777 77777777777777 653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.69  E-value=6.3e-05  Score=51.20  Aligned_cols=46  Identities=26%  Similarity=0.462  Sum_probs=41.2

Q ss_pred             ccCCCccCCCHHHHHHHH-h-ccCCC------Ceeec---cCccccCHHHHHHHHhhh
Q 042026          276 KRCNRKQFSVLSDLRTHE-K-HCGDS------KWQCS---CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       276 ~~C~~k~F~~~~~L~~H~-~-H~g~~------~~~C~---C~~~F~~~~~L~~H~~~H  322 (335)
                      ..|+ +.|.+...|..|+ + |.+.+      +|.|.   |++.+.....|..|++..
T Consensus         7 ~~C~-~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECP-ESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCC-CCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCC-CcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            3599 9999999999998 4 98776      79996   999999999999999875

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.71  E-value=0.00039  Score=53.41  Aligned_cols=28  Identities=21%  Similarity=0.328  Sum_probs=20.8

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhh
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      |+|++||.|. |++.|.+.+.|..|+++.
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            7777777777 777777777777776543

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.36  E-value=0.0017  Score=40.14  Aligned_cols=22  Identities=45%  Similarity=0.759  Sum_probs=11.0

Q ss_pred             ceecccCCCccCCCHHHHHHHHh
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      +|.|+.|+ ..|.....|+.||+
T Consensus        12 ~~~CPrCn-~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCN-AQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTC-CCCSSHHHHHHHHH
T ss_pred             ceeCCccc-ccccchHHHHhhhh
Confidence            44455555 45555555555544

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.13  E-value=0.0078  Score=40.59  Aligned_cols=49  Identities=18%  Similarity=0.062  Sum_probs=38.2

Q ss_pred             CCCCcCCCcchhHHHHHHhhcCCC-----cceecc--cccccccCcHHHHHHHHHh
Q 042026          164 ENGESFSEINGDIIEVDAVDLLAK-----YTHYCQ--VCGKGFKRDANLRMHMRAH  212 (335)
Q Consensus       164 ~c~~~~~~~~~~~~h~~~~~~~~~-----~~~~C~--~C~k~f~~~~~L~~H~r~H  212 (335)
                      .|++.|.+...|..|+...+...+     ..|.|.  .|+..+.....|..|+|..
T Consensus         8 ~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            588899999999999865554332     368886  8998888888899998864

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.94  E-value=0.0078  Score=46.69  Aligned_cols=49  Identities=27%  Similarity=0.360  Sum_probs=40.7

Q ss_pred             cceecccCCCccCCCHHHHHHHHh---cc-------------------------------CCCCeeec-cCccccCHHHH
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK---HC-------------------------------GDSKWQCS-CGTTFSRKDKL  315 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~---H~-------------------------------g~~~~~C~-C~~~F~~~~~L  315 (335)
                      +++.|..|+ ..|.+.+.+..|..   |.                               +.+.|.|. |+++|.+...|
T Consensus        31 ~~~~C~~C~-v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~  109 (127)
T 1zu1_A           31 SDTQCKVCS-AVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVA  109 (127)
T ss_dssp             CSSEETTTT-EECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHH
T ss_pred             CCCcCcCCC-CEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHH
Confidence            678889998 89998888888883   52                               23468899 99999999999


Q ss_pred             HHHHh
Q 042026          316 MGHVA  320 (335)
Q Consensus       316 ~~H~~  320 (335)
                      ..|..
T Consensus       110 ~~H~~  114 (127)
T 1zu1_A          110 ESHYI  114 (127)
T ss_dssp             HHHHT
T ss_pred             HHHHC
Confidence            99975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.71  E-value=0.0032  Score=48.27  Aligned_cols=28  Identities=21%  Similarity=0.350  Sum_probs=25.8

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      .|+|+++|.|..|+ |.|.+.+.|..|++
T Consensus        44 d~tGekpfyC~~C~-K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACA-RYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTT-EECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCc-chhCCHHHHHHHHh
Confidence            46677999999999 99999999999998

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.33  E-value=0.09  Score=40.57  Aligned_cols=96  Identities=16%  Similarity=0.149  Sum_probs=57.9

Q ss_pred             chhHHHHHHhhcCCCcceecccccccccCcHHHHHHH--HHhcCC-CcCcccccCCCccCCCCcCchhhhhhHHHHHHhc
Q 042026          173 NGDIIEVDAVDLLAKYTHYCQVCGKGFKRDANLRMHM--RAHGDE-YKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHA  249 (335)
Q Consensus       173 ~~~~~h~~~~~~~~~~~~~C~~C~k~f~~~~~L~~H~--r~H~~~-~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~  249 (335)
                      ...+.++........+++.|.+|...|.+...+..|.  +.|... +.+.+..+...    ..-++.+.           
T Consensus        16 ~~~~~~~~~e~~~~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~----~~~~~~~~-----------   80 (127)
T 1zu1_A           16 KDAVNSLIRENSHIFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGED----SVPAKKFK-----------   80 (127)
T ss_dssp             HHHHHHHHHHTTTTBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCC----CCSCCCCS-----------
T ss_pred             hHHHhhhhccccccCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCccc----CCCCCccC-----------
Confidence            4455555554444456789999999999999999998  556432 11111000000    00001110           


Q ss_pred             CCCCCCCcccccceeeeeeCCcceecccCCCccCCCHHHHHHHHh
Q 042026          250 KFQPLKSMICVKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       250 ~~~p~~C~~C~k~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                            -    ..+...+...+.|-|..|+ +.|.+...|..|..
T Consensus        81 ------~----~~~~~~~~~~~~~~C~~C~-~~f~s~~~~~~H~~  114 (127)
T 1zu1_A           81 ------A----APAEISDGEDRSKCCPVCN-MTFSSPVVAESHYI  114 (127)
T ss_dssp             ------C----CSSCCSSCCCTTTEETTTT-EECSSHHHHHHHHT
T ss_pred             ------C----CccccccCCCCCeEcCCCC-CEeCCHHHHHHHHC
Confidence                  0    0112234456889999999 99999999999986

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.23  E-value=0.013  Score=36.25  Aligned_cols=25  Identities=24%  Similarity=0.607  Sum_probs=22.3

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhc
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      .+|.|+ |+..|...+.|+.||+---
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CceeCCcccccccchHHHHhhhhhcC
Confidence            579999 9999999999999999443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.03  E-value=0.028  Score=45.68  Aligned_cols=56  Identities=14%  Similarity=0.285  Sum_probs=44.4

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                      +++.|+.|+ ..+ ....|..|.. ....++-.|+ |+..|.. ..|..|..++.|+.++.
T Consensus       109 ~~v~C~~C~-~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~~~~~  166 (170)
T 3hcs_A          109 ALMDCPQCQ-RPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLALEHH  166 (170)
T ss_dssp             SEEECTTTC-CEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC-----
T ss_pred             eeeECCCCC-hHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcChhhhh
Confidence            678999999 777 6778999998 8888999999 9998765 56899999999998763

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=88.47  E-value=0.42  Score=27.52  Aligned_cols=18  Identities=28%  Similarity=0.767  Sum_probs=9.2

Q ss_pred             eeec-cCccccCHHHHHHH
Q 042026          301 WQCS-CGTTFSRKDKLMGH  318 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H  318 (335)
                      |.|+ |.+.|.+...|..|
T Consensus         6 FiCP~C~~~l~s~~~L~~H   24 (34)
T 3mjh_B            6 FICPQCMKSLGSADELFKH   24 (34)
T ss_dssp             EECTTTCCEESSHHHHHHH
T ss_pred             cCCcHHHHHcCCHHHHHHH
Confidence            4455 55555555555555

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.92  E-value=0.19  Score=35.62  Aligned_cols=29  Identities=24%  Similarity=0.444  Sum_probs=19.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCeee
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQC  303 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C  303 (335)
                      ....|-+|| |.|..   |++|+. |+|..|..+
T Consensus        20 d~iiClecG-K~fK~---LkRHL~~~hgltpeeY   49 (87)
T 2jsp_A           20 DHIVCLECG-GSFKS---LKRHLTTHHSMTPEEY   49 (87)
T ss_dssp             SCEECTBTC-CEESB---HHHHHHHTTCSCHHHH
T ss_pred             CceEecccc-hhhHH---HHHHHHHccCCCHHHH
Confidence            456777888 77774   667777 677766444

>1pzw_A Transcription factor grauzone; dimerization, transcription regulation, treble-CLEF zinc FIN transcription; 2.00A {Drosophila melanogaster} SCOP: g.39.1.10

Probab=85.43  E-value=0.037  Score=38.74  Aligned_cols=64  Identities=8%  Similarity=-0.050  Sum_probs=49.2

Q ss_pred             HHHHHhcCCccc---cccccCC-CCCCCCCCCccccccccccCCCCCccccccccccccchhhhhhhh
Q 042026           65 VQEIILTASSLM---VTCQQMS-PPPASTSGTNNITTNEISQLDPNNNQEISSGLQGCYNFSEAFDTW  128 (335)
Q Consensus        65 i~~i~~~~~s~~---~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~  128 (335)
                      +||+|......+   .+||... ....++.++...++.+|...+..|..+|..|....++++++....
T Consensus         2 ~CRlCl~~~~~~~~~~~if~~~~~~~~l~~~I~~~~~i~i~~~d~lP~~IC~~C~~~l~~~~~Fr~~c   69 (80)
T 1pzw_A            2 ICRLCLRGVSGAQMCLQIFDVDSGESKVAEVLRQHFWFEVLPNDEISKVICNVCWTQVSEFHQFYVSI   69 (80)
T ss_dssp             BCTTTCCBCCSSTTEEESSCSSCSCCSHHHHHHHHCSSCCCSSCSSCSEEEHHHHHHHHHHHHHHHHH
T ss_pred             ccccCCCcCCCccceecccCCcccchhHHHHHHHHhCCCcCcccCCccchHHHHHHHHHHHHHHHHHH
Confidence            578888765544   6777653 335666788888889999999999999999999888888766543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=82.52  E-value=1.1  Score=25.78  Aligned_cols=26  Identities=23%  Similarity=0.539  Sum_probs=22.9

Q ss_pred             ceecccCCCccCCCHHHHHHHHh--ccCC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK--HCGD  298 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~--H~g~  298 (335)
                      .|.|+.|- +.|.+...|..|..  |...
T Consensus         5 GFiCP~C~-~~l~s~~~L~~Hye~~H~~~   32 (34)
T 3mjh_B            5 GFICPQCM-KSLGSADELFKHYEAVHDAG   32 (34)
T ss_dssp             EEECTTTC-CEESSHHHHHHHHHHHTSSS
T ss_pred             ccCCcHHH-HHcCCHHHHHHHHHhccccC
Confidence            59999999 99999999999987  7643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	335
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 190 HYCQVCGKGFKRDANLRMHMRAHGDE 215
           + C  C K F++   L MH + + D 
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHDP 34

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 4e-04
 Identities = 13/23 (56%), Positives = 15/23 (65%)

Query: 190 HYCQVCGKGFKRDANLRMHMRAH 212
           H C+VCGK F R   L+ HMR H
Sbjct: 2   HKCEVCGKCFSRKDKLKTHMRCH 24

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.9 bits (81), Expect = 4e-04
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 192 CQVCGKGFKRDANLRMHMRAH 212
           C+VC + F R  +L+ H R+H
Sbjct: 5   CEVCTRAFARQEHLKRHYRSH 25

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 6e-04
 Identities = 11/24 (45%), Positives = 12/24 (50%)

Query: 192 CQVCGKGFKRDANLRMHMRAHGDE 215
           C  CGK F R + L  H R H  E
Sbjct: 10  CVECGKAFSRSSILVQHQRVHTGE 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.1 bits (79), Expect = 8e-04
 Identities = 8/21 (38%), Positives = 13/21 (61%)

Query: 192 CQVCGKGFKRDANLRMHMRAH 212
           C++C + F R  +L  H+R H
Sbjct: 6   CRICMRNFSRSDHLTTHIRTH 26

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.002
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query: 192 CQVCGKGFKRDANLRMHMRAH 212
           C  C K F R  +L  H++ H
Sbjct: 5   CPECPKRFMRSDHLSKHIKTH 25

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 0.002
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 188 YTHYCQVCGKGFKRDANLRMHMRAH 212
             + C VCGK FK   +L  HM+ H
Sbjct: 29  RPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 6/25 (24%), Positives = 13/25 (52%), Gaps = 1/25 (4%)

Query: 192 CQVCGKGFKRDANLRMH-MRAHGDE 215
           C +C   F +   ++MH ++ H + 
Sbjct: 11  CYICHARFTQSGTMKMHILQKHTEN 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	335
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.66
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.51
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.34
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.3
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.22
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.21
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.2
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.18
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.17
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.12
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.09
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.07
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.06
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.03
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.01
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.0
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.96
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.94
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.9
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.9
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.89
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.88
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.86
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.79
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.77
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.71
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.69
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.67
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.61
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.61
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.6
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.54
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.51
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.47
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.44
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.38
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.34
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.27
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.14
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.04
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.98
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.97
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.97
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.9
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.88
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.88
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.85
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.79
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.74
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.67
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.6
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.46
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.42
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.4
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.4
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.29
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.29
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.25
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.25
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.22
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.17
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.17
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.16
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.09
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.04
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.98
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.98
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.91
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.91
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.89
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.82
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.8
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.67
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.66
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.6
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.45
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.44
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.24
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.22
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.18
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.81
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.62
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.58
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.25
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.83
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.67
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.67
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.4
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.27
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.24
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.21
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.01
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.93
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	92.77
d1y0jb1	36	U-shaped transcription factor, different fingers {	92.43
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	90.46
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.46
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	89.45
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.76
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	88.17
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	88.1
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.36
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.77
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	85.81
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.05
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	83.32
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	83.3
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	81.94
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.53
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	80.16

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=2.4e-17  Score=108.08  Aligned_cols=51  Identities=35%  Similarity=0.783  Sum_probs=49.4

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccCCCCeeec-cCccccCHHHHHHHHhhh
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      ||||.|. || +.|.....|..|++ |+|++||.|. ||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cg-k~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CG-KSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TS-CEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CC-CeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899994 99 99999999999999 9999999999 999999999999999998

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.9e-15  Score=96.83  Aligned_cols=52  Identities=35%  Similarity=0.593  Sum_probs=48.9

Q ss_pred             CcceecccccccccCcHHHHHHHHHhcCCCcCcccccCCCccCCCCcCchhhhhhHHHHHHhcCCCCCCCcccccceeee
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALTNPLKKNGSSMGKTMSLQSKLWNKKHAKFQPLKSMICVKNHYKR  266 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~H~~~~~~~c~lc~~~~~~~~~c~~~f~~~l~~h~~~h~~~~p~~C~~C~k~h~~~  266 (335)
                      +++|.|. ||+.|....+|..|+++|+++                                                   
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~e---------------------------------------------------   28 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGL---------------------------------------------------   28 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCC---------------------------------------------------
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccc---------------------------------------------------
Confidence            5789995 999999999999999999998                                                   


Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-c
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-H  295 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H  295 (335)
                          +||.|.+|| ++|...+.|..|++ |
T Consensus        29 ----kpy~C~~C~-k~F~~~~~L~~H~r~H   53 (53)
T d2csha1          29 ----RPYGCGVCG-KKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             ----CSEECTTTS-CEESSSHHHHHHHTTT
T ss_pred             ----cCCcCCCcC-CEecCHHHHHHHHhcC
Confidence                899999999 99999999999998 7

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=1e-13  Score=83.12  Aligned_cols=35  Identities=26%  Similarity=0.561  Sum_probs=26.0

Q ss_pred             HHHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          291 THEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       291 ~H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      +|++ |+++|||.|+ |||+|.+.+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4666 7777777777 777777777777777777775

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=3.9e-13  Score=80.43  Aligned_cols=34  Identities=32%  Similarity=0.673  Sum_probs=25.2

Q ss_pred             CCCCeeec-cCccccCHHHHHHHHh-hhcCCCCccc
Q 042026          297 GDSKWQCS-CGTTFSRKDKLMGHVA-LFVGHTPAVN  330 (335)
Q Consensus       297 g~~~~~C~-C~~~F~~~~~L~~H~~-~H~gekp~~c  330 (335)
                      .+|||.|. ||++|.+.++|.+|++ +|+|||||.|
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            35777777 7777777777777764 6777777777

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=6.7e-13  Score=76.28  Aligned_cols=31  Identities=35%  Similarity=0.827  Sum_probs=25.2

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |+|+|||.|. ||++|.+++.|..|+++|+||
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            6788888888 888888888888888888876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=2.4e-12  Score=76.91  Aligned_cols=35  Identities=34%  Similarity=0.692  Sum_probs=32.5

Q ss_pred             CCcceecccCCCccCCCHHHHHHHHh--ccCCCCeeec
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEK--HCGDSKWQCS  304 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g~~~~~C~  304 (335)
                      .+|||+|.+|| |.|...++|++|++  |+|+|||.|+
T Consensus         2 ~~Kpy~C~~Cg-k~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           2 VGKPYICQSCG-KGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SSCCEECSSSC-CEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCCccCCCCC-CCcCChHHhhccCcCccCCCcCcCCc
Confidence            36999999999 99999999999975  9999999995

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=3.7e-12  Score=75.09  Aligned_cols=31  Identities=32%  Similarity=0.640  Sum_probs=24.6

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |+|++||.|. ||++|.+++.|..|+++|+++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            7788888887 888888888888888888765

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=2.7e-12  Score=76.27  Aligned_cols=33  Identities=30%  Similarity=0.524  Sum_probs=26.0

Q ss_pred             HHh-ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          292 HEK-HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       292 H~~-H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      |.| |+|+|||.|. |+++|.+++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            567 8888888888 88888888888888888754

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=3.2e-12  Score=76.47  Aligned_cols=36  Identities=33%  Similarity=0.620  Sum_probs=34.2

Q ss_pred             ceeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          262 NHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      +|+++|+++|||+|++|| |+|...++|..|++ |+||
T Consensus         2 rH~~~Ht~ekpy~C~~Cg-K~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECG-KSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSC-CBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCC-ceeeCHHHHHHhCccCCCC
Confidence            588899999999999999 99999999999999 9996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=6.3e-12  Score=73.14  Aligned_cols=31  Identities=19%  Similarity=0.501  Sum_probs=24.3

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |+|+|||.|. |++.|.++++|.+|+++|+++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            6778888888 888888888888888888764

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.17  E-value=6e-12  Score=70.14  Aligned_cols=28  Identities=21%  Similarity=0.557  Sum_probs=20.9

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |||.|+ ||++|.+++.|.+|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            577777 7777777777777777777775

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.12  E-value=1.2e-11  Score=67.97  Aligned_cols=27  Identities=37%  Similarity=0.760  Sum_probs=19.3

Q ss_pred             CCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          298 DSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       298 ~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      ||||.|+ |+++|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5677777 77777777777777777765

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.12  E-value=1.1e-11  Score=71.01  Aligned_cols=32  Identities=38%  Similarity=0.582  Sum_probs=29.9

Q ss_pred             eeeCCcceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          266 RSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       266 ~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      +|+++|||+|.+|| |+|...++|..|++ |+||
T Consensus         1 IHTgekpy~C~~Cg-k~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECG-KAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSC-CEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCC-CEeCchHHhHhhccccCCC
Confidence            47788999999999 99999999999999 9986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.6e-11  Score=68.30  Aligned_cols=28  Identities=29%  Similarity=0.625  Sum_probs=20.4

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |||.|+ ||++|.++++|.+|+++|+|||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            567777 7777777777777777777765

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.09  E-value=3.2e-12  Score=80.01  Aligned_cols=39  Identities=21%  Similarity=0.474  Sum_probs=28.9

Q ss_pred             HHHHHHhccCCCCeeec---cCccccCHHHHHHHHhhhcCCC
Q 042026          288 DLRTHEKHCGDSKWQCS---CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       288 ~L~~H~~H~g~~~~~C~---C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      .|..|++|+|++||.|.   |+++|.++++|+.|+++|+|||
T Consensus         6 ~l~~h~~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhhccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34555557788888883   8888888888888888888775

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=3.3e-11  Score=70.79  Aligned_cols=30  Identities=20%  Similarity=0.544  Sum_probs=20.5

Q ss_pred             ccCCCCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          295 HCGDSKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       295 H~g~~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      |+|+|||.|+ |+++|.++++|++|++.+++
T Consensus         3 HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           3 HSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             cCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            6777777777 77777777777777654443

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=3.5e-11  Score=70.49  Aligned_cols=31  Identities=26%  Similarity=0.564  Sum_probs=24.7

Q ss_pred             eeec---cCccccCHHHHHHHHhhhcCCCCcccC
Q 042026          301 WQCS---CGTTFSRKDKLMGHVALFVGHTPAVNV  331 (335)
Q Consensus       301 ~~C~---C~~~F~~~~~L~~H~~~H~gekp~~c~  331 (335)
                      |.|+   ||+.|.+++.|++|+++|+|+|||.|-
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            6775   888888888888888888888888873

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=4.6e-11  Score=70.28  Aligned_cols=34  Identities=26%  Similarity=0.412  Sum_probs=30.8

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      |+|+++|||+|.+|| |+|...+.|+.|++ |+++.
T Consensus         1 R~HTgekPy~C~~C~-k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           1 RTHTGEKPYACSHCD-KTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TTCCCCCCEECSSSS-CEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCCEECCCCC-CCcCCHhHHHHhCcccCCCC
Confidence            468888999999999 99999999999999 98763

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.01  E-value=6e-11  Score=70.29  Aligned_cols=34  Identities=29%  Similarity=0.461  Sum_probs=31.7

Q ss_pred             eeeeeeCCcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          263 HYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       263 h~~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      |.|+|+++|||+|.+|+ +.|...++|+.|++ |.+
T Consensus         2 h~R~HTgeKPy~C~~C~-k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCD-RSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTC-CCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCC-CEecCHHHHHHHHhcCcC
Confidence            67889999999999999 99999999999999 964

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.00  E-value=8.9e-11  Score=65.28  Aligned_cols=28  Identities=25%  Similarity=0.730  Sum_probs=26.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      |||.|++|| |+|...++|++|++ |+|||
T Consensus         1 kp~~C~~C~-k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCT-RAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTC-CCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCC-CCCCCchHcccccCcccCCC
Confidence            699999999 99999999999999 99986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.2e-10  Score=63.94  Aligned_cols=27  Identities=37%  Similarity=0.730  Sum_probs=25.9

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      ||||+|.+|+ |+|+..++|.+|++ |+|
T Consensus         1 EKPy~C~~C~-k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICM-RNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTC-CEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCc-CEecccccccccCCCccC
Confidence            5899999999 99999999999999 987

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.96  E-value=1.8e-10  Score=66.81  Aligned_cols=32  Identities=25%  Similarity=0.477  Sum_probs=29.5

Q ss_pred             eeCCcceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          267 SHCPKMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       267 h~~~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      |+++|||+|.+|+ |.|.+.++|++|++ |++..
T Consensus         2 ~TGekPy~C~~C~-k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICL-SAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSC-CEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCC-CcccChHHHHHHccccCCcC
Confidence            6788999999999 99999999999999 98753

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=2e-10  Score=64.77  Aligned_cols=28  Identities=32%  Similarity=0.755  Sum_probs=22.2

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |||.|+   ||++|.+.++|.+|+++|+|||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            578884   8888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.8e-10  Score=63.89  Aligned_cols=28  Identities=32%  Similarity=0.608  Sum_probs=26.9

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      |||.|++|| |.|.+.++|.+|++ |+|+|
T Consensus         1 Kpy~C~~C~-k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECP-KRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTT-CCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCC-CeecchHHhhhhcCccCCcC
Confidence            699999999 99999999999999 99986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.2e-10  Score=66.49  Aligned_cols=32  Identities=22%  Similarity=0.451  Sum_probs=28.6

Q ss_pred             eeeeCCcceecccCCCccCCCHHHHHHHHh--ccC
Q 042026          265 KRSHCPKMYVCKRCNRKQFSVLSDLRTHEK--HCG  297 (335)
Q Consensus       265 ~~h~~~k~y~C~~C~~k~F~~~~~L~~H~~--H~g  297 (335)
                      |+|+++|||+|++|+ +.|+..++|++|++  |++
T Consensus         1 R~HTgekP~~C~~C~-k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICH-ARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTC-CEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCc-ccccchHHHHHHcccccCC
Confidence            478899999999999 99999999999986  543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.3e-10  Score=63.29  Aligned_cols=27  Identities=37%  Similarity=0.744  Sum_probs=20.3

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcCC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |||.|+   ||++|.+.++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            577774   777777777777777777775

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.89  E-value=3.6e-10  Score=60.41  Aligned_cols=25  Identities=28%  Similarity=0.769  Sum_probs=16.0

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhc
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      |||.|. |||+|.+++.|.+|+|+|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            466666 6666666666666666664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.7e-10  Score=62.56  Aligned_cols=27  Identities=26%  Similarity=0.645  Sum_probs=18.4

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcCC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      |||.|+   ||++|.++++|++|+|+|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            466674   777777777777777777665

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4.5e-10  Score=65.66  Aligned_cols=32  Identities=28%  Similarity=0.728  Sum_probs=29.7

Q ss_pred             ceeccc--CCCccCCCHHHHHHHHh-ccCCCCeeec
Q 042026          272 MYVCKR--CNRKQFSVLSDLRTHEK-HCGDSKWQCS  304 (335)
Q Consensus       272 ~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~~~~C~  304 (335)
                      .|.|+.  || |+|...+.|++|++ |+|+|||.|+
T Consensus         1 tf~C~~~~C~-k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           1 SFSCPEPACG-KSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             CEECSCTTTC-CEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CeECCCCCCC-CeeCChhHhccccCeeCCCCCEeCC
Confidence            378976  99 99999999999999 9999999995

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.79  E-value=9e-10  Score=68.60  Aligned_cols=36  Identities=25%  Similarity=0.443  Sum_probs=32.7

Q ss_pred             ceeeeeeCCcceeccc--CCCccCCCHHHHHHHHh-ccCCC
Q 042026          262 NHYKRSHCPKMYVCKR--CNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       262 ~h~~~h~~~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|+ .|+++|||.|.+  |+ |.|...++|+.|++ |+|+|
T Consensus         9 ~h~-~h~gekpy~C~~~~C~-k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           9 KYV-KEMPDKTFECLFPGCT-KTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GSC-EEETTTEEECCCTTCC-CEECSSSSHHHHHHHHTTTC
T ss_pred             chh-hccCCCCeECCcCCCC-ccccCchHHHhhcccccCCC
Confidence            455 599999999987  99 99999999999999 99986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.3e-09  Score=58.13  Aligned_cols=25  Identities=44%  Similarity=0.755  Sum_probs=24.0

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-cc
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |||+|.+|| |+|...+.|..|+| |+
T Consensus         1 KPy~C~eCg-K~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECG-KAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSC-CEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCc-CeeccCcccccCccCCC
Confidence            799999999 99999999999999 86

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.4e-09  Score=59.00  Aligned_cols=27  Identities=41%  Similarity=0.766  Sum_probs=25.7

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-ccCC
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      |||+|++  || |+|...++|++|++ |+||
T Consensus         1 kp~~C~~~gCg-k~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCR-KSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCC-CCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCC-ceECChhHhhhhcCcCcCC
Confidence            6899988  99 99999999999999 9996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=3.8e-09  Score=58.90  Aligned_cols=27  Identities=48%  Similarity=0.871  Sum_probs=25.6

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-ccCC
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      |||.|++  || |+|...++|++|++ |+||
T Consensus         1 kp~~C~~~gCg-k~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCG-KRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCC-CEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCC-ceECcHHHcCccccccCCC
Confidence            6999987  99 99999999999999 9996

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.67  E-value=3.7e-09  Score=58.31  Aligned_cols=26  Identities=31%  Similarity=0.777  Sum_probs=18.4

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~g  324 (335)
                      |||.|+   |+++|.+.++|.+|+|+|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            567774   77777777777777777765

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=8.3e-09  Score=52.26  Aligned_cols=25  Identities=48%  Similarity=0.906  Sum_probs=18.0

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhhcC
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      |++|+ |++.|++++.|+.|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677 77777777777777777765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.61  E-value=1e-08  Score=57.90  Aligned_cols=28  Identities=25%  Similarity=0.600  Sum_probs=19.9

Q ss_pred             CCCeeec---cCccccCHHHHHHHHhhhcCC
Q 042026          298 DSKWQCS---CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       298 ~~~~~C~---C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      ||||.|+   ||++|.+.++|.+|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            4677775   777777777777777777653

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.2e-08  Score=57.29  Aligned_cols=28  Identities=29%  Similarity=0.846  Sum_probs=25.8

Q ss_pred             cceecc--cCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCK--RCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      |||.|+  .|| |+|...++|++|++ |+|+|
T Consensus         1 kpf~C~~~~C~-k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCG-KRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCC-CBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCC-cCcCChhHhhhhcCcccccC
Confidence            689995  599 99999999999999 99986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=9.3e-09  Score=52.08  Aligned_cols=26  Identities=50%  Similarity=1.016  Sum_probs=24.5

Q ss_pred             ceecccccccccCcHHHHHHHHHhcC
Q 042026          189 THYCQVCGKGFKRDANLRMHMRAHGD  214 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~H~~  214 (335)
                      |++|+.|+|.|+++..|++|||.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.51  E-value=1e-08  Score=55.78  Aligned_cols=25  Identities=20%  Similarity=0.612  Sum_probs=17.9

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhc
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~  323 (335)
                      |||.|+   |||+|.+.++|++|+|+|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            567775   7777777777777777774

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.47  E-value=3e-08  Score=54.58  Aligned_cols=26  Identities=38%  Similarity=0.866  Sum_probs=24.6

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-ccC
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      |||+|.+  |+ |+|...++|++|++ |+|
T Consensus         1 Kp~~C~~~gC~-k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCD-RRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCC-CEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCC-cEECchhHhhhhcCccCC
Confidence            6899987  99 99999999999999 987

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=7.2e-08  Score=52.42  Aligned_cols=31  Identities=26%  Similarity=0.462  Sum_probs=22.2

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCCCcc
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHTPAV  329 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gekp~~  329 (335)
                      +...|. |||.|....+|.+|...|+|||||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            445677 7777777777777777777777763

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.38  E-value=8.4e-08  Score=54.03  Aligned_cols=28  Identities=36%  Similarity=0.670  Sum_probs=25.6

Q ss_pred             Ccceeccc--CCCccCCCHHHHHHHHh-ccCC
Q 042026          270 PKMYVCKR--CNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       270 ~k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      ||||.|.+  || |+|+..++|++|++ |+.+
T Consensus         1 ErP~~C~~pgC~-k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCD-KAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCC-CCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCC-CeeCCHHHHHHHhhhccCC
Confidence            58999988  99 99999999999999 9864

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.34  E-value=1.8e-07  Score=48.89  Aligned_cols=26  Identities=27%  Similarity=0.768  Sum_probs=20.1

Q ss_pred             CCCeeec-cCccccCHHHHHHHHhhhc
Q 042026          298 DSKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       298 ~~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      |+||.|. ||+.|.+.+..++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            5778887 8888888888888877774

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.27  E-value=8.7e-08  Score=52.05  Aligned_cols=25  Identities=40%  Similarity=0.843  Sum_probs=23.3

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-cc
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |||.|++  || |+|+..++|++|++ |+
T Consensus         1 rPf~C~~~gC~-K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCN-KKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCC-CCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcC-CcCCCHHHHHHHHhhcc
Confidence            6899988  99 99999999999999 86

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=6.1e-07  Score=47.54  Aligned_cols=28  Identities=36%  Similarity=0.772  Sum_probs=24.4

Q ss_pred             CCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          298 DSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       298 ~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      ++||.|+ |+..|.+++-+.-|+|.|.|-
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            5889999 999999999999999999774

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=6.2e-07  Score=48.68  Aligned_cols=31  Identities=29%  Similarity=0.616  Sum_probs=28.8

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCCCee
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDSKWQ  302 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~~~~  302 (335)
                      |...|..|| |.|.....|.+|.. |+|++||.
T Consensus         4 k~~~ce~cg-k~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICG-KIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTT-EEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHH-HHHHHHHHHHhhhcccCCCCCCC
Confidence            667899999 99999999999999 99999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.4e-06  Score=44.84  Aligned_cols=24  Identities=42%  Similarity=0.785  Sum_probs=12.0

Q ss_pred             eecccCCCccCCCHHHHHHHHh-ccC
Q 042026          273 YVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       273 y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      +.|.+|| |+|...+.|++|.. |+|
T Consensus         3 hvc~ecg-kaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECG-KAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTC-CEESSHHHHHHHGGGTSC
T ss_pred             chHHHHh-HHHHHHHHHHHHhhcccC
Confidence            3455555 55555555555554 544

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.98  E-value=2.2e-06  Score=44.71  Aligned_cols=26  Identities=27%  Similarity=0.671  Sum_probs=24.2

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-cc
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      +|||.|..|| +.|..+...++|.+ |.
T Consensus         1 EkPf~C~~Cg-rkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICG-RKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTC-CEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhh-hhhhcchhhhhhhhhcc
Confidence            5899999999 99999999999999 84

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.5e-06  Score=45.20  Aligned_cols=26  Identities=23%  Similarity=0.563  Sum_probs=18.9

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~g  324 (335)
                      +||.|.   |+++|...++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            577775   77777777777777776654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.5e-06  Score=43.91  Aligned_cols=26  Identities=31%  Similarity=0.657  Sum_probs=24.3

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhhcCC
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      .+.|. |||.|...+.|++|..+|+||
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46899 999999999999999999986

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=3.7e-06  Score=43.48  Aligned_cols=26  Identities=19%  Similarity=0.459  Sum_probs=13.8

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      +||+|. |...-.+.+.|..|+|.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455555 55555555555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.88  E-value=4.7e-06  Score=42.23  Aligned_cols=25  Identities=28%  Similarity=0.458  Sum_probs=18.9

Q ss_pred             eec-cCccccCHHHHHHHHhhhcCCC
Q 042026          302 QCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       302 ~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +|+ |.++|..+..|+.|-|.|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            577 7777777777777777777775

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=5.2e-06  Score=43.16  Aligned_cols=26  Identities=19%  Similarity=0.471  Sum_probs=16.4

Q ss_pred             eeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          301 WQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      |.|+ ||......+-|++|+|.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            5566 6666666666666666666653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=4.9e-06  Score=43.02  Aligned_cols=28  Identities=29%  Similarity=0.529  Sum_probs=25.9

Q ss_pred             CcceecccCCCccCCCHHHHHHHHh-ccCC
Q 042026          270 PKMYVCKRCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       270 ~k~y~C~~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      ++||+|..|. ..-...+.|..|+| |+|.
T Consensus         1 erpfkcqlcs-y~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICP-YASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSS-CEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecc-cccCCchheEEeeecccCc
Confidence            4899999999 99999999999999 9984

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.85  E-value=4.3e-06  Score=44.22  Aligned_cols=29  Identities=34%  Similarity=0.717  Sum_probs=27.0

Q ss_pred             CcceecccccccccCcHHHHHHHHHhcCC
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRAHGDE  215 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~H~~~  215 (335)
                      ++||.|++|+.+|+++..+..|.|.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47899999999999999999999999875

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.79  E-value=7.9e-06  Score=42.36  Aligned_cols=24  Identities=25%  Similarity=0.599  Sum_probs=20.9

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhh
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H  322 (335)
                      .||.|+   |+++|+..+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            588997   999999999999998887

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.1e-05  Score=41.97  Aligned_cols=27  Identities=26%  Similarity=0.522  Sum_probs=25.1

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      .|.|++|| .....++-|++|+| |++++
T Consensus         1 kYvC~~Cg-~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICEECG-IRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCTTTC-CBCSSHHHHHHHHHHTSSCC
T ss_pred             CccccccC-cccCCHHHHHHHHHHhcCCC
Confidence            38999999 99999999999999 99975

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=1.2e-05  Score=40.66  Aligned_cols=26  Identities=35%  Similarity=0.581  Sum_probs=24.1

Q ss_pred             ecccccccccCcHHHHHHHHHhcCCC
Q 042026          191 YCQVCGKGFKRDANLRMHMRAHGDEY  216 (335)
Q Consensus       191 ~C~~C~k~f~~~~~L~~H~r~H~~~~  216 (335)
                      .|+.|.|.|.++..|+.|-|.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            59999999999999999999999973

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.9e-05  Score=41.71  Aligned_cols=26  Identities=50%  Similarity=0.829  Sum_probs=23.1

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-ccC
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      |||.|..  |+ |++..+++|++|++ +.|
T Consensus         1 KPY~Ck~~gC~-K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCT-KRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTC-CEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCC-cccCCHHHHHHHHHhhCC
Confidence            6899977  99 99999999999999 544

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=6e-05  Score=39.02  Aligned_cols=28  Identities=32%  Similarity=0.646  Sum_probs=23.0

Q ss_pred             CCCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          298 DSKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       298 ~~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      +.-|.|. |...|.++-.|+.||..|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4568888 888888888888888888875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=4.4e-05  Score=43.66  Aligned_cols=25  Identities=28%  Similarity=0.708  Sum_probs=16.6

Q ss_pred             cCCCCeeec-cCccccCHHHHHHHHh
Q 042026          296 CGDSKWQCS-CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       296 ~g~~~~~C~-C~~~F~~~~~L~~H~~  320 (335)
                      +|-+||.|. |+|.|+.++++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            356677777 7777777777766654

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=6.3e-05  Score=38.45  Aligned_cols=24  Identities=17%  Similarity=0.512  Sum_probs=12.1

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhh
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      +||+|. |...-...+.|.+|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            345555 554445555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=5.3e-05  Score=38.74  Aligned_cols=25  Identities=36%  Similarity=0.610  Sum_probs=23.8

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-cc
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |||+|..|. .+-...+.|++|+| |.
T Consensus         2 kp~kck~cd-yaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCD-YAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSC-CEESSHHHHHHHHHHSC
T ss_pred             CCccccccc-chhcchhhHhhhhhccc
Confidence            799999999 99999999999999 85

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.29  E-value=7e-05  Score=39.01  Aligned_cols=23  Identities=39%  Similarity=0.639  Sum_probs=13.7

Q ss_pred             cceecccCCCccCCCHHHHHHHHh
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      |||.|.+|. ..-...++|+.|.+
T Consensus         1 kpy~cqyc~-yrsadssnlkthik   23 (30)
T d1klra_           1 KTYQCQYCE-FRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCCSSSS-CCCSCSHHHHHHHH
T ss_pred             CCccccccc-cccccchhhhhhhh
Confidence            456666666 55555666666665

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.29  E-value=9.7e-05  Score=38.22  Aligned_cols=28  Identities=39%  Similarity=0.783  Sum_probs=25.9

Q ss_pred             cceecccccccccCcHHHHHHHHHhcCC
Q 042026          188 YTHYCQVCGKGFKRDANLRMHMRAHGDE  215 (335)
Q Consensus       188 ~~~~C~~C~k~f~~~~~L~~H~r~H~~~  215 (335)
                      ..|.|..|...|++.-.|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            4589999999999999999999999985

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.25  E-value=6.2e-05  Score=40.08  Aligned_cols=25  Identities=32%  Similarity=0.873  Sum_probs=18.4

Q ss_pred             Ceeec-cCccccCHHHHHHHH-hhhcC
Q 042026          300 KWQCS-CGTTFSRKDKLMGHV-ALFVG  324 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~-~~H~g  324 (335)
                      ||.|. |++.|++++-|.+|. ++|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            67787 888888888888884 45654

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=3.4e-05  Score=41.09  Aligned_cols=22  Identities=45%  Similarity=0.857  Sum_probs=10.8

Q ss_pred             cceeccc--CCCccCCCHHHHHHHH
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHE  293 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~  293 (335)
                      |||.|..  |. |+|+..++..+|+
T Consensus         1 kPY~C~~~gC~-KafsNsSDraKHq   24 (31)
T d2glia4           1 KPYMCEHEGCS-KAFSNASDRAKHQ   24 (31)
T ss_dssp             CCEECCSTTCC-CEESSSSTTHHHH
T ss_pred             CCccccCCChh-hhhcchhhhhhhc
Confidence            3455544  55 5555555555554

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.22  E-value=0.00012  Score=41.53  Aligned_cols=28  Identities=25%  Similarity=0.570  Sum_probs=16.2

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGHT  326 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~gek  326 (335)
                      +.|.|. |++.|.+...|-.||+.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            345666 6666666666666666664443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.17  E-value=0.00014  Score=40.95  Aligned_cols=27  Identities=30%  Similarity=0.641  Sum_probs=23.6

Q ss_pred             CCCCeeec---cCccccCHHHHHHHHhhhc
Q 042026          297 GDSKWQCS---CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       297 g~~~~~C~---C~~~F~~~~~L~~H~~~H~  323 (335)
                      .+|||.|.   |+.+|.+.++|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            47899995   9999999999999998885

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.17  E-value=8.9e-05  Score=38.49  Aligned_cols=27  Identities=22%  Similarity=0.534  Sum_probs=17.1

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcCC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      +||.|.   |.|.|....+|.+|.-+|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            456664   666666666666666666664

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.16  E-value=0.00012  Score=36.37  Aligned_cols=22  Identities=27%  Similarity=0.703  Sum_probs=10.8

Q ss_pred             eeec-cCccccCHHHHHHHHhhh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~H  322 (335)
                      |+|. |.++|..++.|.+|+|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            3444 555555555555555444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.09  E-value=0.00015  Score=37.47  Aligned_cols=24  Identities=50%  Similarity=0.933  Sum_probs=21.5

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-c
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-H  295 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H  295 (335)
                      .||+|+.  |+ |.|+.++-|++|.+ |
T Consensus         2 ~py~c~hegcd-k~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCD-KRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCC-CEESSHHHHHHHHHHH
T ss_pred             CCccCCccCcc-ccccCHHHHhhhhhcc
Confidence            4788865  99 99999999999998 7

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.04  E-value=0.00022  Score=37.05  Aligned_cols=27  Identities=22%  Similarity=0.557  Sum_probs=18.2

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhcCC
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      +||+|+ |...-.+.++|..|++..+|.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            467777 776667777777776655543

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.98  E-value=0.0001  Score=39.24  Aligned_cols=27  Identities=19%  Similarity=0.437  Sum_probs=24.4

Q ss_pred             CCeeec---cCccccCHHHHHHHH-hhhcCC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHV-ALFVGH  325 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~-~~H~ge  325 (335)
                      |||.|.   |.|.|++.+...+|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            699997   999999999999997 999764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.98  E-value=0.00028  Score=34.99  Aligned_cols=23  Identities=35%  Similarity=0.735  Sum_probs=21.6

Q ss_pred             eecccCCCccCCCHHHHHHHHh-cc
Q 042026          273 YVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       273 y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |+|..|. ++|..++.|.+|++ |.
T Consensus         1 ykcglce-rsfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCE-RSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSC-CBCSSHHHHHHHGGGTC
T ss_pred             CcccchH-HHHHHHHHHHHHHHhhc
Confidence            7899999 99999999999999 84

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00027  Score=36.56  Aligned_cols=22  Identities=27%  Similarity=0.717  Sum_probs=18.4

Q ss_pred             Ceeec-cCccccCHHHHHHHHhh
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      ||.|. |..+|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            68888 88888888888888874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.91  E-value=0.00033  Score=39.75  Aligned_cols=28  Identities=29%  Similarity=0.628  Sum_probs=25.6

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccCCC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCGDS  299 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g~~  299 (335)
                      +.|+|..|+ +.|.+...|=.||+ |..++
T Consensus         4 r~~~C~~C~-k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCK-REFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTC-CEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCC-CccCCcccccchHhhhcchH
Confidence            789999999 99999999999999 97654

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.89  E-value=0.00023  Score=36.92  Aligned_cols=27  Identities=41%  Similarity=0.839  Sum_probs=24.2

Q ss_pred             cceeccc--CCCccCCCHHHHHHHHh-ccCC
Q 042026          271 KMYVCKR--CNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       271 k~y~C~~--C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      |||.|.+  |. |.|.....|.+|.. |+|+
T Consensus         1 ~pfpc~~egc~-kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCE-KGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCC-CEESSTTHHHHHHHHHHTC
T ss_pred             CCcCccccccc-ccchhhhhhhhhhccccCC
Confidence            5888865  99 99999999999999 9986

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.0004  Score=36.08  Aligned_cols=25  Identities=20%  Similarity=0.401  Sum_probs=22.2

Q ss_pred             CCeeec-cCccccCHHHHHHHHhhhc
Q 042026          299 SKWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       299 ~~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      +||.|. |...-...++|+.|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            699999 9999999999999987544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.80  E-value=0.0004  Score=39.59  Aligned_cols=26  Identities=27%  Similarity=0.464  Sum_probs=23.2

Q ss_pred             CCcceecccCCCccCCCHHHHHHHHhc
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEKH  295 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~H  295 (335)
                      +-|||.|..|+ |.|.+..++.+|..|
T Consensus         2 GiKPYeC~~C~-KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICA-KRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSC-CEESCHHHHHHHHHH
T ss_pred             CCCceeccchh-hhhhhHHHHHHhhhh
Confidence            45999999999 999999999999754

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00052  Score=35.49  Aligned_cols=22  Identities=36%  Similarity=0.668  Sum_probs=21.3

Q ss_pred             ceecccCCCccCCCHHHHHHHHh
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      ||.|..|+ -+|..+.+|..||+
T Consensus         1 py~C~~Cn-F~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCN-FSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSS-CEESSHHHHHHHHH
T ss_pred             Ccccceee-eeEeeccchhHhhh
Confidence            79999999 99999999999998

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=0.00056  Score=33.85  Aligned_cols=21  Identities=33%  Similarity=0.827  Sum_probs=17.3

Q ss_pred             Ceeec-cCccccCHHHHHHHHh
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~  320 (335)
                      ||+|+ |...|.++..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            78888 8888888888888864

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.60  E-value=0.0005  Score=37.84  Aligned_cols=26  Identities=23%  Similarity=0.567  Sum_probs=19.7

Q ss_pred             Ceeec---cC---ccccCHHHHHHHHhhhcCC
Q 042026          300 KWQCS---CG---TTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       300 ~~~C~---C~---~~F~~~~~L~~H~~~H~ge  325 (335)
                      .|.|.   |.   +.|..+..|..|||.|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            35664   54   5688888899999998886

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.45  E-value=0.00094  Score=35.41  Aligned_cols=25  Identities=36%  Similarity=0.693  Sum_probs=23.2

Q ss_pred             ceecccCCCccCCCHHHHHHHHh--ccC
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK--HCG  297 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~--H~g  297 (335)
                      ||.|.+|+ +.|+....|-+|..  |.|
T Consensus         1 Pf~C~~C~-R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCN-RAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTC-CEESSHHHHHHHHTTTSCC
T ss_pred             Cccccccc-chhhHHHHHHHHHHHHhcC
Confidence            79999999 99999999999987  876

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.00088  Score=34.70  Aligned_cols=23  Identities=26%  Similarity=0.491  Sum_probs=21.5

Q ss_pred             cceecccCCCccCCCHHHHHHHHh
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      +||+|..|. -.-.+.++|.+|++
T Consensus         1 rPFkC~~Cs-FDtkq~SnL~kH~k   23 (29)
T d1x5wa2           1 RPFKCNYCS-FDTKQPSNLSKHMK   23 (29)
T ss_dssp             CSEECSSSS-CEESSHHHHHHHHH
T ss_pred             CCcccceec-ccccCcchHHHHHH
Confidence            689999999 88899999999998

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.24  E-value=0.0015  Score=33.09  Aligned_cols=22  Identities=36%  Similarity=0.883  Sum_probs=17.9

Q ss_pred             Ceeec-cCccccCHHHHHHHHhh
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      ||.|. ||+.|-++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            68888 88888888888888653

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.22  E-value=0.0018  Score=34.04  Aligned_cols=27  Identities=30%  Similarity=0.774  Sum_probs=22.6

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhhcCC
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALFVGH  325 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H~ge  325 (335)
                      +.|.|+   |+-.|...+.|..|+-.|+||
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            568886   888888888888888888886

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.18  E-value=0.0016  Score=32.15  Aligned_cols=22  Identities=36%  Similarity=0.718  Sum_probs=20.9

Q ss_pred             ceecccCCCccCCCHHHHHHHHh
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      ||+|.-|. ..|.++.+|+.||.
T Consensus         2 pykcsscs-qqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCS-QQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSC-CEESSHHHHHHHHH
T ss_pred             CCcccHHH-HHHHHHHHHHHHHH
Confidence            79999999 99999999999985

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0037  Score=31.81  Aligned_cols=24  Identities=38%  Similarity=0.732  Sum_probs=15.1

Q ss_pred             ceecccCCCccCCCHHHHHHHHh-cc
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |-+|++|. ++.+++..|+.|.| |+
T Consensus         2 pekc~ecs-yscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECS-YSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSS-CEESSHHHHHHHHGGGC
T ss_pred             CccCcccc-cccCcHHHHHHhhcccc
Confidence            34566666 66666666666666 64

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.62  E-value=0.0033  Score=31.80  Aligned_cols=23  Identities=35%  Similarity=0.575  Sum_probs=20.4

Q ss_pred             ceecccccccccCcHHHHHHHHH
Q 042026          189 THYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      ||+|..|||.|.++.+|..|...
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            58999999999999999999643

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.58  E-value=0.0039  Score=31.66  Aligned_cols=22  Identities=27%  Similarity=0.596  Sum_probs=16.0

Q ss_pred             ceecccCCCccCCCHHHHHHHHh
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      .|.|+.|+ .....+++|+.|++
T Consensus         2 k~qcphc~-tiiarksdlrvhlr   23 (28)
T d2ct1a1           2 KFHCPHCD-TVIARKSDLGVHLR   23 (28)
T ss_dssp             SEECSSSS-CEESSHHHHHHHHH
T ss_pred             CccCCcch-hheeehhhhhHHhh
Confidence            36777777 77777777777776

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.25  E-value=0.0071  Score=30.74  Aligned_cols=24  Identities=29%  Similarity=0.411  Sum_probs=22.2

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhhc
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H~  323 (335)
                      |-+|+ |..+.+.+..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            56899 9999999999999999995

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.83  E-value=0.01  Score=32.08  Aligned_cols=25  Identities=36%  Similarity=0.854  Sum_probs=18.8

Q ss_pred             Ceeec-cCccccCHHHHHHHHhhhcC
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVALFVG  324 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~H~g  324 (335)
                      .|.|. |||+|.++..+.+|--..+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47787 88888888888888766655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.01  Score=33.15  Aligned_cols=26  Identities=27%  Similarity=0.646  Sum_probs=23.3

Q ss_pred             Ccceec--ccCCCccCCCHHHHHHHHh-cc
Q 042026          270 PKMYVC--KRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       270 ~k~y~C--~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      +|||.|  +-|+ .+|.+...|..|.+ |.
T Consensus         4 dkPF~C~~pGC~-q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCG-QRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTC-CEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCcc-ccccchHHHHHhhhhhe
Confidence            689999  5699 99999999999998 75

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.67  E-value=0.0057  Score=33.47  Aligned_cols=24  Identities=38%  Similarity=0.502  Sum_probs=19.3

Q ss_pred             cccccccccCcHHHHHHHHHhcCC
Q 042026          192 CQVCGKGFKRDANLRMHMRAHGDE  215 (335)
Q Consensus       192 C~~C~k~f~~~~~L~~H~r~H~~~  215 (335)
                      |.-=++.|.....|..|||+|+||
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            333456799999999999999986

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.0094  Score=35.06  Aligned_cols=27  Identities=37%  Similarity=0.591  Sum_probs=24.1

Q ss_pred             cceecccccccccCcHHHHHHHHHhcC
Q 042026          188 YTHYCQVCGKGFKRDANLRMHMRAHGD  214 (335)
Q Consensus       188 ~~~~C~~C~k~f~~~~~L~~H~r~H~~  214 (335)
                      ..|.|..|||.|.....|+.|...|.-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            458899999999999999999988864

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.27  E-value=0.016  Score=29.34  Aligned_cols=22  Identities=36%  Similarity=0.717  Sum_probs=20.2

Q ss_pred             Ceeec-cCccccCHHHHHHHHhh
Q 042026          300 KWQCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      .|+|+ |+....+++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            58999 99999999999999874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.24  E-value=0.012  Score=34.58  Aligned_cols=25  Identities=36%  Similarity=0.644  Sum_probs=20.5

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-cc
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      --|.|..|| |.|.....|+.|.. |-
T Consensus         5 ~l~pCG~Cg-K~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCG-KVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTC-CCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccc-cccCCHHHHhHhHHhcC
Confidence            357888999 99999999998887 63

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.014  Score=29.68  Aligned_cols=21  Identities=19%  Similarity=0.550  Sum_probs=17.7

Q ss_pred             eec---cCccccCHHHHHHHHhhh
Q 042026          302 QCS---CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       302 ~C~---C~~~F~~~~~L~~H~~~H  322 (335)
                      .|+   |+|.|...+.+++|+-+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            576   889999999999988877

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.01  E-value=0.033  Score=27.90  Aligned_cols=23  Identities=26%  Similarity=0.668  Sum_probs=15.7

Q ss_pred             eeec---cCccccCHHHHHHHHhhhc
Q 042026          301 WQCS---CGTTFSRKDKLMGHVALFV  323 (335)
Q Consensus       301 ~~C~---C~~~F~~~~~L~~H~~~H~  323 (335)
                      |.|.   |++.|..-..|+.|+-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            5564   7777777777777776664

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.93  E-value=0.033  Score=29.06  Aligned_cols=27  Identities=30%  Similarity=0.712  Sum_probs=23.9

Q ss_pred             cceecc--cCCCccCCCHHHHHHHHh-ccCC
Q 042026          271 KMYVCK--RCNRKQFSVLSDLRTHEK-HCGD  298 (335)
Q Consensus       271 k~y~C~--~C~~k~F~~~~~L~~H~~-H~g~  298 (335)
                      |.|.|.  .|+ -.|...+.|..|+- |+|+
T Consensus         2 k~~iCsf~dC~-A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCG-AAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGC-CEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcc-hhhccchhhhHHhhhhcCC
Confidence            568885  499 99999999999998 9986

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.77  E-value=0.049  Score=26.77  Aligned_cols=21  Identities=38%  Similarity=0.928  Sum_probs=14.4

Q ss_pred             eeec-cCccccCHHHHHHHHhh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVAL  321 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~~  321 (335)
                      |.|+ |=+.|.+++++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            5677 77777777777777654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=92.43  E-value=0.03  Score=29.88  Aligned_cols=19  Identities=37%  Similarity=0.808  Sum_probs=12.1

Q ss_pred             eeec-cCccccCHHHHHHHH
Q 042026          301 WQCS-CGTTFSRKDKLMGHV  319 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~  319 (335)
                      |.|. ||-+|+..+.|..|+
T Consensus         9 f~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHT
T ss_pred             eeccccceeecChhHHHhhh
Confidence            6666 666666666666663

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.46  E-value=0.099  Score=28.06  Aligned_cols=26  Identities=27%  Similarity=0.722  Sum_probs=22.3

Q ss_pred             cceecccCCCccCCCHHHHHHHHh-ccC
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK-HCG  297 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~-H~g  297 (335)
                      -.|.|..|| |.|.....+.+|.. -+|
T Consensus         3 ~afvcskcg-ktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           3 AAFVCSKCG-KTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CCEECSSSC-CEESCHHHHHHHHHHCCC
T ss_pred             ceeeecccc-cchhcchHHHHHhhhcCC
Confidence            469999999 99999999999976 444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.46  E-value=0.14  Score=26.16  Aligned_cols=22  Identities=32%  Similarity=0.791  Sum_probs=16.4

Q ss_pred             ceecccCCCccCCCHHHHHHHHh
Q 042026          272 MYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       272 ~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      .|.|..|| |...+...++.|..
T Consensus         2 ~ftc~hcg-kqlks~~gmkyhvm   23 (30)
T d2ctda2           2 MFTCHHCG-KQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCCCSSSC-CCCSSHHHHHHHHH
T ss_pred             ceechhHH-HHHhhccCceEEEe
Confidence            46777777 77777777777765

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.45  E-value=0.14  Score=25.12  Aligned_cols=21  Identities=33%  Similarity=0.708  Sum_probs=19.9

Q ss_pred             eecccCCCccCCCHHHHHHHHh
Q 042026          273 YVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       273 y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      |.|+.|- |.|..+.++..|.+
T Consensus         2 ypcp~cf-keftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCF-KEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTC-CEESCHHHHHHHHH
T ss_pred             cCCchhh-HHhccccCceEEEE
Confidence            8999999 99999999999987

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.76  E-value=0.15  Score=25.44  Aligned_cols=23  Identities=39%  Similarity=0.884  Sum_probs=19.8

Q ss_pred             eec--ccCCCccCCCHHHHHHHHh-cc
Q 042026          273 YVC--KRCNRKQFSVLSDLRTHEK-HC  296 (335)
Q Consensus       273 y~C--~~C~~k~F~~~~~L~~H~~-H~  296 (335)
                      |.|  .-|+ |+|..-..|+.|+- |+
T Consensus         2 yvchfe~c~-kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCG-KAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCC-CEESSHHHHHHHHHHHH
T ss_pred             eEEEecCch-HHHhhccceEEEeeccc
Confidence            677  4599 99999999999998 75

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.17  E-value=0.044  Score=35.41  Aligned_cols=25  Identities=32%  Similarity=0.634  Sum_probs=21.2

Q ss_pred             CcceecccccccccCcHHHHHHHHH
Q 042026          187 KYTHYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       187 ~~~~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      ...|.|..|+|.|.+...|..|+++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            3458999999999999999999753

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=88.10  E-value=0.3  Score=24.88  Aligned_cols=24  Identities=25%  Similarity=0.688  Sum_probs=18.1

Q ss_pred             CCeeec---cCccccCHHHHHHHHhhh
Q 042026          299 SKWQCS---CGTTFSRKDKLMGHVALF  322 (335)
Q Consensus       299 ~~~~C~---C~~~F~~~~~L~~H~~~H  322 (335)
                      +.|.|.   |.-+|..+.++++|...+
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfnrf   27 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFNRF   27 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHhhh
Confidence            357885   888888888888885433

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.36  E-value=0.24  Score=25.28  Aligned_cols=23  Identities=30%  Similarity=0.657  Sum_probs=19.0

Q ss_pred             ceecccccccccCcHHHHHHHHH
Q 042026          189 THYCQVCGKGFKRDANLRMHMRA  211 (335)
Q Consensus       189 ~~~C~~C~k~f~~~~~L~~H~r~  211 (335)
                      .|.|..|||..++...++.|...
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEEee
Confidence            37899999999999999988644

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.77  E-value=0.33  Score=25.68  Aligned_cols=23  Identities=30%  Similarity=0.625  Sum_probs=21.2

Q ss_pred             cceecccCCCccCCCHHHHHHHHh
Q 042026          271 KMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       271 k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      ..|.|.-|| -+|++.+.|..|+.
T Consensus         7 arf~c~pcg-irfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCG-IAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTC-CBCSCHHHHHHHTT
T ss_pred             cceeccccc-eeecChhHHHhhhh
Confidence            569999999 99999999999976

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.81  E-value=0.16  Score=25.64  Aligned_cols=20  Identities=35%  Similarity=0.798  Sum_probs=17.4

Q ss_pred             cccccccCcHHHHHHHHHhc
Q 042026          194 VCGKGFKRDANLRMHMRAHG  213 (335)
Q Consensus       194 ~C~k~f~~~~~L~~H~r~H~  213 (335)
                      -|+|.|...+.++.|+-+|.
T Consensus         8 gC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGGS
T ss_pred             cHHHHhhchHHHHHHhhccC
Confidence            48999999999999998875

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.05  E-value=0.12  Score=33.21  Aligned_cols=20  Identities=25%  Similarity=0.547  Sum_probs=11.4

Q ss_pred             eeec-cCccccCHHHHHHHHh
Q 042026          301 WQCS-CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       301 ~~C~-C~~~F~~~~~L~~H~~  320 (335)
                      |.|. |++.|.+...|..|++
T Consensus        16 fYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTT
T ss_pred             EecccccCccCCHHHHHHHHc
Confidence            5555 6666655555555543

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.32  E-value=0.42  Score=24.22  Aligned_cols=16  Identities=38%  Similarity=0.679  Sum_probs=13.6

Q ss_pred             cCccccCHHHHHHHHh
Q 042026          305 CGTTFSRKDKLMGHVA  320 (335)
Q Consensus       305 C~~~F~~~~~L~~H~~  320 (335)
                      ||+-|+++..|..|.+
T Consensus         8 c~kifsnrqylnhh~k   23 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TCCEESSHHHHHHHHH
T ss_pred             chhhhccHHHHHhHHH
Confidence            8888888888888865

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=83.30  E-value=0.46  Score=25.47  Aligned_cols=19  Identities=16%  Similarity=0.728  Sum_probs=9.7

Q ss_pred             Ceeec-cCccccCHHHHHHH
Q 042026          300 KWQCS-CGTTFSRKDKLMGH  318 (335)
Q Consensus       300 ~~~C~-C~~~F~~~~~L~~H  318 (335)
                      .|+|. |.+.|...+++.+|
T Consensus         8 ~yRC~~C~r~YTHISNFCRH   27 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRH   27 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHH
Confidence            35555 55555555555555

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.94  E-value=0.51  Score=23.88  Aligned_cols=21  Identities=33%  Similarity=0.496  Sum_probs=17.7

Q ss_pred             ccCCCccCCCHHHHHHHHh--ccC
Q 042026          276 KRCNRKQFSVLSDLRTHEK--HCG  297 (335)
Q Consensus       276 ~~C~~k~F~~~~~L~~H~~--H~g  297 (335)
                      +-|| |.|+....|.-|.+  |--
T Consensus         6 ~gc~-kifsnrqylnhh~kyqh~h   28 (30)
T d2dlka1           6 PGCG-RIFSNRQYLNHHKKYQHIH   28 (30)
T ss_dssp             TTTC-CEESSHHHHHHHHHHGGGS
T ss_pred             CCch-hhhccHHHHHhHHHHHHhh
Confidence            4599 99999999999988  643

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.53  E-value=0.52  Score=27.29  Aligned_cols=25  Identities=20%  Similarity=0.339  Sum_probs=22.1

Q ss_pred             CCcceecccCCCccCCCHHHHHHHHh
Q 042026          269 CPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       269 ~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      .+.|-.|+.|+ -...+..+|++|+.
T Consensus        21 s~qpatcpic~-avirqsrnlrrhle   45 (54)
T d1yuja_          21 SEQPATCPICY-AVIRQSRNLRRHLE   45 (54)
T ss_dssp             TSCCEECTTTC-CEESSHHHHHHHHH
T ss_pred             ccCCCCCchHH-HHHHHHHHHHHHHH
Confidence            35789999999 89999999999987

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=80.16  E-value=0.75  Score=24.59  Aligned_cols=26  Identities=23%  Similarity=0.552  Sum_probs=23.0

Q ss_pred             eCCcceecccCCCccCCCHHHHHHHHh
Q 042026          268 HCPKMYVCKRCNRKQFSVLSDLRTHEK  294 (335)
Q Consensus       268 ~~~k~y~C~~C~~k~F~~~~~L~~H~~  294 (335)
                      .++..|.|..|. +.+...+++-+|..
T Consensus         4 Eg~~~yRC~~C~-r~YTHISNFCRHyv   29 (37)
T d2drpa1           4 EGEHTYRCKVCS-RVYTHISNFCRHYV   29 (37)
T ss_dssp             EETTEEECTTTC-CEESSHHHHHHHHH
T ss_pred             ccCcEEEeehhh-HHHHHHHHHHHHHH
Confidence            345689999999 99999999999986