Citrus Sinensis ID: 042057

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------
Protein Sequence
VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVLNKQMDN
Secondary Structure (PSIPRED)
cccccccccccccccHHHHHHHHHHHHccccccccccccccHHHHHHHHcccccccEEcccccccccccHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcHHHHHccccc
Secondary Structure Prediction (SSPRO)
ccEEEccEEcccccHEHHHHEHHHHHcccccccccccccccHHHHHHHHHHHHHHHHccHHHHcccccccccccHHHHHHHHHHHHHHHccccHcccccHHHHHHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
veyglgsgvstngdvYSYGILLLEMettkkptdvmfegdlnlHRFArmalpdhvvyivdpillndgkgetrinsRLACVNSMVRIGVAcsmespqdrmnITNVVHELQSVKNILLKHENVLNKQMDN
Flexible Loop (DISEMBL)
veyglgsgvstngdvYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVLNKQMDN
Low Complexity Region (SEG)
VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVLNKQMDN
Disordered region (IsUnstruct)
*********STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH**********
Disordered Region (DISOPRED)
VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGK**TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI**************
Disordered Region (DISEMBL)
VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVLNKQMDN
Disordered Region (DISPRO)
VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK***********
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVLNKQMDN
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	127	2.2.26 [Sep-21-2011]
C0LGP4	1010	Probable LRR receptor-lik	no	no	0.881	0.110	0.405	7e-18
C0LGT6	1031	LRR receptor-like serine/	no	no	0.771	0.095	0.405	1e-14
Q9SD62	1025	Putative receptor-like pr	no	no	0.905	0.112	0.372	3e-14
Q9ZUI0	980	Putative leucine-rich rep	no	no	0.952	0.123	0.330	3e-14
C0LGJ1	1106	Probable LRR receptor-lik	no	no	0.779	0.089	0.311	3e-07
Q9LYN8	1192	Leucine-rich repeat recep	no	no	0.763	0.081	0.336	2e-06
Q9LP77	655	Probable inactive recepto	no	no	0.763	0.148	0.304	2e-06
Q9SSL9	1123	Leucine-rich repeat recep	no	no	0.755	0.085	0.317	4e-06
Q9LZM4	657	Wall-associated receptor	no	no	0.850	0.164	0.304	7e-06
Q9ZPS9	1143	Serine/threonine-protein	no	no	0.937	0.104	0.318	7e-06

>sp|C0LGP4|Y3475_ARATH Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 4/116 (3%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+G   S NGDVYS+GILLLEM T K+PT+ +F G+  L+ + + ALP+ ++ IVD  
Sbjct: 891  EYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDES 950

Query: 62   LLNDGKGETRINSRLA-CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK 116
            +L+ G    R+   +  C+  +  +G+ C  ESP +R+  + VV EL S++    K
Sbjct: 951  ILHIG---LRVGFPVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|C0LGT6|EFR_ARATH LRR receptor-like serine/threonine-protein kinase EFR OS=Arabidopsis thaliana GN=EFR PE=1 SV=1

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/111 (40%), Positives = 59/111 (53%), Gaps = 13/111 (11%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           EYG+G   S  GDVYS+GILLLEM + KKPTD  F GD NLH + +  L           
Sbjct: 901 EYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILSG--------- 951

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
                 G   I+  L  V   +++G+ CS E P+DRM     V EL S+++
Sbjct: 952 -CTSSGGSNAIDEGLRLV---LQVGIKCSEEYPRDRMRTDEAVRELISIRS 998

Constitutes the pattern-recognition receptor (PPR) that determines the specific perception of elongation factor Tu (EF-Tu), a potent elicitor of the defense response to pathogen-associated molecular patterns (PAMPs). Reduces transformation by Rhizobium radiobacter probably by inducing plant defense during the interaction. Binding to the effector AvrPto1 from P.syringae blocks the downstream plant immune response.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9SD62|Y3471_ARATH Putative receptor-like protein kinase At3g47110 OS=Arabidopsis thaliana GN=At3g47110 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 44/118 (37%), Positives = 68/118 (57%), Gaps = 3/118 (2%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDP 60
            EYG+G   S  GDVYS+GI+LLE+ T K+PT+ +F   L LH F + AL     + I D 
Sbjct: 908  EYGMGGHPSIMGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDE 967

Query: 61   ILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE 118
             +L  G      N  + C+  + R+GV+CS ESP +R+++   + +L S++    + E
Sbjct: 968  TILR-GAYAQHFN-MVECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRDE 1023

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ZUI0|Y2241_ARATH Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana GN=At2g24130 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 69/124 (55%), Gaps = 3/124 (2%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           EYG+G   ST+GDVYS+G+LLLE+ + ++PTDV+     +LH F +   PD +  I++  
Sbjct: 845 EYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYPDSLEGIIEQA 904

Query: 62  LLN---DGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE 118
           L      GK E         +  M+ +G+ C+  +P  R ++ +V HE+  +K  L    
Sbjct: 905 LSRWKPQGKPEKCEKLWREVILEMIELGLVCTQYNPSTRPDMLDVAHEMGRLKEYLFACP 964

Query: 119 NVLN 122
           ++L+
Sbjct: 965 SLLH 968

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|C0LGJ1|Y1743_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1

 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 7/106 (6%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG     +T GDVYSYG+L +E+ T ++  D    G+  L  +AR  +  ++     PI
Sbjct: 987  EYGQTWQATTRGDVYSYGVLTMELATGRRAVD---GGEECLVEWARRVMTGNMTAKGSPI 1043

Query: 62   LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHEL 107
             L+     T+  +    +  +++IGV C+ + PQ R N+  V+  L
Sbjct: 1044 TLSG----TKPGNGAEQMTELLKIGVKCTADHPQARPNMKEVLAML 1085

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LYN8|EXS_ARATH Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1

 Score = 51.2 bits (121), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 19/116 (16%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF---EGDLNLHRFARMALPD-HVVYI 57
            EYG  +  +T GDVYS+G++LLE+ T K+PT   F   EG  NL  +A   +     V +
Sbjct: 1089 EYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGG-NLVGWAIQKINQGKAVDV 1147

Query: 58   VDPILLNDGKGETRINSRLACVNSMVR---IGVACSMESPQDRMNITNVVHELQSV 110
            +DP+L++           +A  NS +R   I + C  E+P  R N+ +V+  L+ +
Sbjct: 1148 IDPLLVS-----------VALKNSQLRLLQIAMLCLAETPAKRPNMLDVLKALKEI 1192

Receptor with a serine/threonine-protein kinase activity required for the specification of the correct number of male archesporial initials and for the subsequent specification of tapetal and middle cell layer identities. In seeds, required for enhancing cell size and the rate of embryonic development.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LP77|Y1848_ARATH Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=1 SV=1

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 59/105 (56%), Gaps = 8/105 (7%)

Query: 9   VSTNGDVYSYGILLLEMETTKKPTD-VMFEGDLNLHRFARMALPDHVVY-IVDPILLNDG 66
           VS  GDVYS+G++LLE+ T K P++ VM E  ++L R+ +    D     + D  LL+  
Sbjct: 545 VSQKGDVYSFGVVLLELITGKAPSNSVMNEEGVDLPRWVKSVARDEWRREVFDSELLSLA 604

Query: 67  KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVK 111
             E  +      +  MV++G+ C+ + P  R  ++ VV ++++++
Sbjct: 605 TDEEEM------MAEMVQLGLECTSQHPDQRPEMSEVVRKMENLR 643

Arabidopsis thaliana (taxid: 3702)

>sp|Q9SSL9|PEPR1_ARATH Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1

 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 11/107 (10%)

Query: 14   DVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-------DHVVYIVDPILLNDG 66
            DVYSYG++LLE+ T K+  D  F    ++  + R AL        D V  IVDPIL++  
Sbjct: 1011 DVYSYGVVLLELVTRKRAVDKSFPESTDIVSWVRSALSSSNNNVEDMVTTIVDPILVD-- 1068

Query: 67   KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI 113
              E   +S    V  +  + ++C+ + P  R  + + V  L+ VK++
Sbjct: 1069 --ELLDSSLREQVMQVTELALSCTQQDPAMRPTMRDAVKLLEDVKHL 1113

Acts as a receptor for PEP defense peptides. Unlike typical immune receptors, senses an endogenous elicitor that potentiates PAMP-inducible plant responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9LZM4|WAKLQ_ARATH Wall-associated receptor kinase-like 20 OS=Arabidopsis thaliana GN=WAKL20 PE=2 SV=1

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 7/115 (6%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF-EGDLNLHRFA-RMALPDHVVYIVD 59
           EY     ++   DVYS+G++LLEM T+KK  D    E D+NL  +  +M   + +   +D
Sbjct: 541 EYYRNFQLTDKSDVYSFGVVLLEMVTSKKAIDFTREEEDVNLVMYINKMMDQERLTECID 600

Query: 60  PILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL 114
           P+L    K   +I+  +  +  +  +  AC  E  Q+R ++  V  E++ + NIL
Sbjct: 601 PLL---KKTANKID--MQTIQQLGNLASACLNERRQNRPSMKEVADEIEYIINIL 650

Serine/threonine-protein kinase that may function as a signaling receptor of extracellular matrix component.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: -

>sp|Q9ZPS9|BRL2_ARATH Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL2 PE=1 SV=1

 Score = 49.3 bits (116), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 42/132 (31%), Positives = 65/132 (49%), Gaps = 13/132 (9%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARM-ALPDHVVYIVDP 60
            EY      +  GDVYS G+++LE+ + K+PTD    GD NL  +++M A     + ++D 
Sbjct: 1013 EYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLVGWSKMKAREGKHMEVIDE 1072

Query: 61   ILLNDGKGETRINSRLA-----CVNSMVR---IGVACSMESPQDRMNITNVV---HELQS 109
             LL +G  E+ +N +        V  M+R   I + C  + P  R N+  VV    EL+ 
Sbjct: 1073 DLLKEGSSES-LNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLRELRG 1131

Query: 110  VKNILLKHENVL 121
             +N    H N L
Sbjct: 1132 SENNSHSHSNSL 1143

Receptor with a serine/threonine-protein kinase activity, which may transduce extracellular spatial and temporal signals into downstream cell differentiation responses in provascular and procambial cells. In contrast to BRI1, BRL1 and BRL3, it does not bind brassinolide.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
255576770	851	serine-threonine protein kinase, plant-t	0.874	0.130	0.588	1e-29
255571897	1013	serine-threonine protein kinase, plant-t	0.850	0.106	0.558	1e-28
224141953	1026	predicted protein [Populus trichocarpa]	0.866	0.107	0.585	3e-28
255581223	1015	receptor-kinase, putative [Ricinus commu	0.905	0.113	0.553	4e-28
224121306	966	predicted protein [Populus trichocarpa]	0.937	0.123	0.516	5e-27
224115346	1017	predicted protein [Populus trichocarpa]	0.889	0.111	0.503	2e-26
255577438	1028	receptor-kinase, putative [Ricinus commu	0.905	0.111	0.496	3e-26
224113117	1006	predicted protein [Populus trichocarpa]	0.897	0.113	0.524	9e-26
224127492	1022	predicted protein [Populus trichocarpa]	0.897	0.111	0.508	1e-25
359482058	1040	PREDICTED: probable LRR receptor-like se	0.897	0.109	0.488	2e-25

>gi|255576770|ref|XP_002529272.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223531261|gb|EEF33104.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  134 bits (337), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 8/119 (6%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           EYGLGS VST+GDVYSYGILLLEM T KKPTD  F G+ NLH   RMALPD V  IVDPI
Sbjct: 724 EYGLGSEVSTSGDVYSYGILLLEMMTGKKPTDDNFTGNHNLHSICRMALPDEVSEIVDPI 783

Query: 62  LL-------NDGKGETR-INSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
           LL       N G  E +  +S++ C+ SM+++G+ACSMESPQDRM+I+N +  L  +K+
Sbjct: 784 LLQGDETNNNQGSMEPKAADSKVKCLISMIKVGIACSMESPQDRMDISNALTNLHYIKS 842

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571897|ref|XP_002526891.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis] gi|223533790|gb|EEF35522.1| serine-threonine protein kinase, plant-type, putative [Ricinus communis]

 Score =  130 bits (328), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 62/111 (55%), Positives = 82/111 (73%), Gaps = 3/111 (2%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+G G+ST GD YS+GILLLE+ T ++PTD MF+G+LNLH F RMALP+ V  IVDP+
Sbjct: 896  EYGMGEGLSTQGDAYSFGILLLEIFTARRPTDGMFQGELNLHNFCRMALPERVRDIVDPL 955

Query: 62   LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
            LL +     R+ +   C+ S++RIG++CS E+P+DRM I N V EL  VKN
Sbjct: 956  LLPEENTGERVQN---CLASVLRIGLSCSTETPRDRMEIRNAVRELHLVKN 1003

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224141953|ref|XP_002324325.1| predicted protein [Populus trichocarpa] gi|222865759|gb|EEF02890.1| predicted protein [Populus trichocarpa]

 Score =  129 bits (325), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 65/111 (58%), Positives = 82/111 (73%), Gaps = 1/111 (0%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG G  VS +GDVYSYGILLLEM T K+P D  FE  LNLH FA+MALPDHV+ I DP+
Sbjct: 895  EYGQGREVSIDGDVYSYGILLLEMMTGKRPIDDTFEKGLNLHMFAKMALPDHVIEITDPV 954

Query: 62   LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
            LL++   E    S   C+ S+V+IGVACSM+SP+DRM+++ VV EL  V++
Sbjct: 955  LLSERHLENAA-SMEECLTSLVKIGVACSMDSPRDRMDMSRVVRELLMVRD 1004

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255581223|ref|XP_002531424.1| receptor-kinase, putative [Ricinus communis] gi|223528974|gb|EEF30966.1| receptor-kinase, putative [Ricinus communis]

 Score =  129 bits (324), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 67/121 (55%), Positives = 86/121 (71%), Gaps = 6/121 (4%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+GS VST GDVYSYGILLLE+ T K+PTD MF+ DLNLH FA +A  D +  + DPI
Sbjct: 891  EYGVGSNVSTYGDVYSYGILLLELFTGKRPTDDMFKEDLNLHNFAEIAFRDQLAEVADPI 950

Query: 62   LLND-GKGETRINSRLA-----CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL 115
            LL +    ETR+NSR       C+ SM+RIGVACS E PQ+RM I +VV  L ++++ L+
Sbjct: 951  LLQETAVRETRLNSRKCQRLEECLFSMLRIGVACSTEMPQERMKINDVVTGLHAIRDKLV 1010

Query: 116  K 116
            +
Sbjct: 1011 R 1011

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224121306|ref|XP_002330794.1| predicted protein [Populus trichocarpa] gi|222872596|gb|EEF09727.1| predicted protein [Populus trichocarpa]

 Score =  125 bits (315), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 64/124 (51%), Positives = 89/124 (71%), Gaps = 5/124 (4%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           EYG+G+ VST+GDV+SYGILLLEM + K+PTDV+FE  LNLH + + ALP  V  I+DPI
Sbjct: 832 EYGMGNEVSTSGDVFSYGILLLEMFSGKRPTDVIFEDSLNLHTYMKAALPGKVEEILDPI 891

Query: 62  LLNDGKGETR----INSRLA-CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK 116
           L+ + KGE       NS++  CV S+  +G+ACS E P +RM+I+ V  ELQ++K  LL+
Sbjct: 892 LVQEIKGERSSSYMWNSKVQDCVVSVFEVGIACSAELPSERMDISEVTAELQAIKEKLLR 951

Query: 117 HENV 120
            E++
Sbjct: 952 SEDM 955

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224115346|ref|XP_002317009.1| predicted protein [Populus trichocarpa] gi|222860074|gb|EEE97621.1| predicted protein [Populus trichocarpa]

 Score =  123 bits (309), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 65/129 (50%), Positives = 83/129 (64%), Gaps = 16/129 (12%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYGLGS VS  GD+YSYGI LLEM T K+PTD MFEG LNLH FARMALP+ V+ IVDP 
Sbjct: 888  EYGLGSQVSIYGDIYSYGIPLLEMITRKRPTDNMFEGTLNLHGFARMALPEQVLNIVDPS 947

Query: 62   LLNDGK----------------GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH 105
            LL+ G                     I + + CV S+++IG++CS E P+DR+ I + + 
Sbjct: 948  LLSSGNVKAGRMSNTSLENPTSSSGEIGTLVECVTSLIQIGLSCSRELPRDRLEINHAIT 1007

Query: 106  ELQSVKNIL 114
            EL S++ IL
Sbjct: 1008 ELCSIRKIL 1016

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255577438|ref|XP_002529598.1| receptor-kinase, putative [Ricinus communis] gi|223530931|gb|EEF32790.1| receptor-kinase, putative [Ricinus communis]

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 64/129 (49%), Positives = 88/129 (68%), Gaps = 14/129 (10%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+GS VST GDVY+YGILLLE+ T KKPTD MF+  LNLH  A+MA+PD +    DP 
Sbjct: 895  EYGMGSDVSTYGDVYTYGILLLELFTGKKPTDAMFKDGLNLHILAKMAMPDRLALAADPF 954

Query: 62   LL---NDGKGETRINSR-----------LACVNSMVRIGVACSMESPQDRMNITNVVHEL 107
            LL   ++G   +  ++            L C+NS+++IGV CS ESP+DRM+I++V +EL
Sbjct: 955  LLITEDEGTSASATSASHRITCIARDKVLGCLNSILKIGVDCSAESPRDRMDISDVANEL 1014

Query: 108  QSVKNILLK 116
              ++NILL+
Sbjct: 1015 VRIRNILLE 1023

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224113117|ref|XP_002316396.1| predicted protein [Populus trichocarpa] gi|222865436|gb|EEF02567.1| predicted protein [Populus trichocarpa]

 Score =  121 bits (304), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 65/124 (52%), Positives = 86/124 (69%), Gaps = 10/124 (8%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+G+ VST GDVYSYGILLLE+ T K PTD  F+  LNLH++ +MALPD VV +VDPI
Sbjct: 877  EYGIGNEVSTYGDVYSYGILLLEILTGKTPTDGSFKEGLNLHKYVKMALPDRVVEVVDPI 936

Query: 62   LL--------NDGKGETRINSR--LACVNSMVRIGVACSMESPQDRMNITNVVHELQSVK 111
            LL        N   G  RI +   L C+ S++ +GV+CS++ P++R NI+NVV EL  ++
Sbjct: 937  LLREIEQTSANASDGMKRIGNDKVLECLVSIMEVGVSCSVDLPRERTNISNVVAELHRIR 996

Query: 112  NILL 115
             ILL
Sbjct: 997  GILL 1000

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224127492|ref|XP_002329291.1| predicted protein [Populus trichocarpa] gi|222870745|gb|EEF07876.1| predicted protein [Populus trichocarpa]

 Score =  120 bits (302), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 10/124 (8%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+G  VST GDVYSYGILLLEM T K+P D MF+  LNLH +A+MALPD +V +VDP+
Sbjct: 893  EYGIGGKVSTYGDVYSYGILLLEMFTGKRPVDGMFKDGLNLHSYAKMALPDRIVEVVDPL 952

Query: 62   LL--------NDGKGETRINSR--LACVNSMVRIGVACSMESPQDRMNITNVVHELQSVK 111
            L+        +D  G   I      AC+ +++++GVACS+E P++RM+I +VV EL  +K
Sbjct: 953  LVREIRSVNSSDEMGMYHIGPHEISACLMTIIKMGVACSVELPRERMDIGDVVTELNRIK 1012

Query: 112  NILL 115
            + LL
Sbjct: 1013 DTLL 1016

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482058|ref|XP_002274540.2| PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570-like [Vitis vinifera]

 Score =  120 bits (301), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/127 (48%), Positives = 82/127 (64%), Gaps = 13/127 (10%)

Query: 2    EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
            EYG+G+ VS  GD YSYGILLLEM T K+PT+ MF   LNLH F +MALP+ +  I+DP 
Sbjct: 903  EYGMGTKVSALGDTYSYGILLLEMFTGKRPTESMFSDQLNLHNFVKMALPERIADIIDPF 962

Query: 62   LLNDGKGETRI----NSRLA---------CVNSMVRIGVACSMESPQDRMNITNVVHELQ 108
             L+    E       +S LA         C+ S++RIGV+CS+ESP++RM IT  + ELQ
Sbjct: 963  FLSSEAKEEETTAADSSNLAHMKREKMHECLISILRIGVSCSLESPRERMAITEAIKELQ 1022

Query: 109  SVKNILL 115
             ++ ILL
Sbjct: 1023 LIRKILL 1029

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	127
TAIR|locus:2079157	1011	AT3G47580 [Arabidopsis thalian	0.881	0.110	0.413	5.1e-18
TAIR|locus:2079142	1010	AT3G47570 [Arabidopsis thalian	0.881	0.110	0.405	9.8e-17
TAIR|locus:2075631	1009	AT3G47090 [Arabidopsis thalian	0.881	0.111	0.370	1.9e-15
UNIPROTKB|Q40640	1025	Xa21 "Receptor kinase-like pro	0.889	0.110	0.386	1.9e-15
TAIR|locus:2075661	1025	AT3G47110 [Arabidopsis thalian	0.905	0.112	0.372	2.2e-14
TAIR|locus:2175703	502	AT5G39390 [Arabidopsis thalian	0.771	0.195	0.423	3.1e-14
TAIR|locus:2047525	980	AT2G24130 [Arabidopsis thalian	0.952	0.123	0.330	7.2e-14
TAIR|locus:2149922	1031	EFR "EF-TU receptor" [Arabidop	0.771	0.095	0.414	2.6e-13
TAIR|locus:2182870	1192	EMS1 "EXCESS MICROSPOROCYTES1"	0.787	0.083	0.336	2.9e-07
TAIR|locus:2041150	1143	BRL2 "BRI1-like 2" [Arabidopsi	0.937	0.104	0.318	9.6e-07

TAIR|locus:2079157 AT3G47580 [Arabidopsis thaliana (taxid:3702)]

 Score = 231 (86.4 bits), Expect = 5.1e-18, P = 5.1e-18
 Identities = 48/116 (41%), Positives = 72/116 (62%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+G   S +GDVYS+G+LLLEM T K+PTD +F G+L LH + ++ALP+ V  I D  
Sbjct:   892 EYGMGGQPSIHGDVYSFGVLLLEMFTGKRPTDELFGGNLTLHSYTKLALPEKVFEIADKA 951

Query:    62 LLNDGKGETRINSRLA-CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK 116
             +L+ G    R+  R A C+  ++ +G+ C  E P +R+  + V  EL S++    K
Sbjct:   952 ILHIG---LRVGFRTAECLTLVLEVGLRCCEEYPTNRLATSEVAKELISIRERFFK 1004

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2079142 AT3G47570 [Arabidopsis thaliana (taxid:3702)]

 Score = 219 (82.2 bits), Expect = 9.8e-17, P = 9.8e-17
 Identities = 47/116 (40%), Positives = 72/116 (62%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+G   S NGDVYS+GILLLEM T K+PT+ +F G+  L+ + + ALP+ ++ IVD  
Sbjct:   891 EYGVGGQPSINGDVYSFGILLLEMFTGKRPTNELFGGNFTLNSYTKSALPERILDIVDES 950

Query:    62 LLNDGKGETRINSRLA-CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK 116
             +L+ G    R+   +  C+  +  +G+ C  ESP +R+  + VV EL S++    K
Sbjct:   951 ILHIG---LRVGFPVVECLTMVFEVGLRCCEESPMNRLATSIVVKELISIRERFFK 1003

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

TAIR|locus:2075631 AT3G47090 [Arabidopsis thaliana (taxid:3702)]

 Score = 207 (77.9 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 43/116 (37%), Positives = 70/116 (60%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+G   S +GDVYS+G+L+LEM T K+PT+ +F G+  L+ + + ALP+ V+ I D  
Sbjct:   890 EYGMGGQPSIHGDVYSFGVLVLEMFTGKRPTNELFGGNFTLNSYTKAALPERVLDIADKS 949

Query:    62 LLNDGKGETRINSR-LACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK 116
             +L+ G    R+    L C+  ++ +G+ C  ESP +R+  +    EL S++    K
Sbjct:   950 ILHSG---LRVGFPVLECLKGILDVGLRCCEESPLNRLATSEAAKELISIRERFFK 1002

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009507 "chloroplast" evidence=IDA

UNIPROTKB|Q40640 Xa21 "Receptor kinase-like protein" [Oryza sativa (taxid:4530)]

 Score = 207 (77.9 bits), Expect = 1.9e-15, P = 1.9e-15
 Identities = 46/119 (38%), Positives = 71/119 (59%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+G   ST+GD+YSYGIL+LE+ T K+PTD  F  DL L ++  + L   V  +VD  
Sbjct:   893 EYGVGLIASTHGDIYSYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTK 952

Query:    62 LLNDGKG--ETRINS---RLA-CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL 114
             L+ D +    +  NS   R+  C+  ++R+G++CS E P  R    +++ EL ++K  L
Sbjct:   953 LILDSENWLNSTNNSPCRRITECIVWLLRLGLSCSQELPSSRTPTGDIIDELNAIKQNL 1011

GO:0005515 "protein binding" evidence=IPI

TAIR|locus:2075661 AT3G47110 [Arabidopsis thaliana (taxid:3702)]

 Score = 197 (74.4 bits), Expect = 2.2e-14, P = 2.2e-14
 Identities = 44/118 (37%), Positives = 68/118 (57%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH-VVYIVDP 60
             EYG+G   S  GDVYS+GI+LLE+ T K+PT+ +F   L LH F + AL     + I D 
Sbjct:   908 EYGMGGHPSIMGDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDE 967

Query:    61 ILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE 118
              +L  G      N  + C+  + R+GV+CS ESP +R+++   + +L S++    + E
Sbjct:   968 TILR-GAYAQHFNM-VECLTLVFRVGVSCSEESPVNRISMAEAISKLVSIRESFFRDE 1023

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2175703 AT5G39390 [Arabidopsis thaliana (taxid:3702)]

 Score = 191 (72.3 bits), Expect = 3.1e-14, P = 3.1e-14
 Identities = 47/111 (42%), Positives = 62/111 (55%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+GS  S  GDVYS+G+LLLEM T KKPTD  F G  NLH + +  L           
Sbjct:   398 EYGMGSKPSIQGDVYSFGVLLLEMFTGKKPTDNSFGGGYNLHGYTKSVLSCST------- 450

Query:    62 LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
               + G G T ++  L  V   + +G+ CS E P+DRM +   V EL S+K+
Sbjct:   451 --SRG-GRTMVDEWLRLV---LEVGIKCSEEYPRDRMGMAEAVRELVSIKS 495

GO:0004672 "protein kinase activity" evidence=IEA;ISS

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2047525 AT2G24130 [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 7.2e-14, P = 7.2e-14
 Identities = 41/124 (33%), Positives = 69/124 (55%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+G   ST+GDVYS+G+LLLE+ + ++PTDV+     +LH F +   PD +  I++  
Sbjct:   845 EYGMGKRASTHGDVYSFGVLLLEIVSGRRPTDVLVNEGSSLHEFMKSHYPDSLEGIIEQA 904

Query:    62 LLN---DGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE 118
             L      GK E         +  M+ +G+ C+  +P  R ++ +V HE+  +K  L    
Sbjct:   905 LSRWKPQGKPEKCEKLWREVILEMIELGLVCTQYNPSTRPDMLDVAHEMGRLKEYLFACP 964

Query:   119 NVLN 122
             ++L+
Sbjct:   965 SLLH 968

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2149922 EFR "EF-TU receptor" [Arabidopsis thaliana (taxid:3702)]

 Score = 187 (70.9 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 46/111 (41%), Positives = 61/111 (54%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
             EYG+G   S  GDVYS+GILLLEM + KKPTD  F GD NLH + +  L           
Sbjct:   901 EYGMGGQPSIQGDVYSFGILLLEMFSGKKPTDESFAGDYNLHSYTKSILSG--------- 951

Query:    62 LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
               + G G   I+  L  V   +++G+ CS E P+DRM     V EL S+++
Sbjct:   952 CTSSG-GSNAIDEGLRLV---LQVGIKCSEEYPRDRMRTDEAVRELISIRS 998

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0016045 "detection of bacterium" evidence=RCA;IDA

GO:0005515 "protein binding" evidence=IPI

GO:0002764 "immune response-regulating signaling pathway" evidence=IMP

GO:0009626 "plant-type hypersensitive response" evidence=IMP

GO:0019199 "transmembrane receptor protein kinase activity" evidence=TAS

GO:0010359 "regulation of anion channel activity" evidence=IMP

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0009581 "detection of external stimulus" evidence=RCA

GO:0009595 "detection of biotic stimulus" evidence=RCA

GO:0009697 "salicylic acid biosynthetic process" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010200 "response to chitin" evidence=RCA

GO:0010310 "regulation of hydrogen peroxide metabolic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0031347 "regulation of defense response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0042742 "defense response to bacterium" evidence=RCA

GO:0043900 "regulation of multi-organism process" evidence=RCA

GO:0050776 "regulation of immune response" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2182870 EMS1 "EXCESS MICROSPOROCYTES1" [Arabidopsis thaliana (taxid:3702)]

 Score = 131 (51.2 bits), Expect = 2.9e-07, P = 2.9e-07
 Identities = 38/113 (33%), Positives = 63/113 (55%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF---EGDLNLHRFARMALPD-HVVYI 57
             EYG  +  +T GDVYS+G++LLE+ T K+PT   F   EG  NL  +A   +     V +
Sbjct:  1089 EYGQSARATTKGDVYSFGVILLELVTGKEPTGPDFKESEGG-NLVGWAIQKINQGKAVDV 1147

Query:    58 VDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
             +DP+L++        NS+L     +++I + C  E+P  R N+ +V+  L+ +
Sbjct:  1148 IDPLLVSVALK----NSQLR----LLQIAMLCLAETPAKRPNMLDVLKALKEI 1192

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0009556 "microsporogenesis" evidence=IMP

GO:0010234 "tapetal cell fate specification" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0019199 "transmembrane receptor protein kinase activity" evidence=ISS

GO:0005515 "protein binding" evidence=IPI

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

TAIR|locus:2041150 BRL2 "BRI1-like 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 126 (49.4 bits), Expect = 9.6e-07, P = 9.6e-07
 Identities = 42/132 (31%), Positives = 65/132 (49%)

Query:     2 EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARM-ALPDHVVYIVDP 60
             EY      +  GDVYS G+++LE+ + K+PTD    GD NL  +++M A     + ++D 
Sbjct:  1013 EYYQSFRCTAKGDVYSIGVVMLEILSGKRPTDKEEFGDTNLVGWSKMKAREGKHMEVIDE 1072

Query:    61 ILLNDGKGETRINSRLA-----CVNSMVR---IGVACSMESPQDRMNITNVV---HELQS 109
              LL +G  E+ +N +        V  M+R   I + C  + P  R N+  VV    EL+ 
Sbjct:  1073 DLLKEGSSES-LNEKEGFEGGVIVKEMLRYLEIALRCVDDFPSKRPNMLQVVASLRELRG 1131

Query:   110 VKNILLKHENVL 121
              +N    H N L
Sbjct:  1132 SENNSHSHSNSL 1143

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005886 "plasma membrane" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007169 "transmembrane receptor protein tyrosine kinase signaling pathway" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0004675 "transmembrane receptor protein serine/threonine kinase activity" evidence=ISS

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0010233 "phloem transport" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0009734 "auxin mediated signaling pathway" evidence=RCA;IMP

GO:0009742 "brassinosteroid mediated signaling pathway" evidence=IMP

GO:0010305 "leaf vascular tissue pattern formation" evidence=IMP

GO:0002237 "response to molecule of bacterial origin" evidence=RCA

GO:0007165 "signal transduction" evidence=RCA

GO:0010075 "regulation of meristem growth" evidence=RCA

GO:0010103 "stomatal complex morphogenesis" evidence=RCA

GO:0048443 "stamen development" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	127
PLN00113	968	PLN00113, PLN00113, leucine-rich repeat receptor-l	9e-07

>gnl|CDD|215061 PLN00113, PLN00113, leucine-rich repeat receptor-like protein kinase; Provisional

 Score = 46.0 bits (109), Expect = 9e-07
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 7/103 (6%)

Query: 9   VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDPILLNDGK 67
           ++   D+Y +G++L+E+ T K P D  F    ++  +AR    D H+   +DP +    +
Sbjct: 855 ITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSI----R 910

Query: 68  GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
           G+  +N     V  M  + + C+   P  R    +V+  L+S 
Sbjct: 911 GDVSVNQN-EIVEVM-NLALHCTATDPTARPCANDVLKTLESA 951

Length = 968

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	127
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.81
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	99.8
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.79
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.73
KOG0192	362	consensus Tyrosine kinase specific for activated (	99.73
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.73
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.68
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.67
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.67
PHA02988	283	hypothetical protein; Provisional	99.67
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.65
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.64
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.63
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.63
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.61
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.6
KOG4721	904	consensus Serine/threonine protein kinase, contain	99.58
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.57
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.57
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.56
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.55
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.54
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.54
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.53
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.53
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.53
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.53
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.53
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.53
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.52
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.52
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.52
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.51
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.51
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.51
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.51
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.51
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.5
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.5
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.5
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.49
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.49
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.49
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.49
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.49
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.49
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.48
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.48
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.48
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.48
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.48
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.48
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.48
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.48
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.48
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.47
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.47
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.47
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.47
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.47
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.46
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.46
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.46
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.45
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.45
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.45
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.45
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.45
KOG0581	364	consensus Mitogen-activated protein kinase kinase	99.45
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.45
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.45
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.45
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.44
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.44
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.44
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.44
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	99.44
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.44
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.44
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.43
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.43
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.43
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.43
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.43
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.43
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.43
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.43
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.43
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.43
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.43
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.43
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.42
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.42
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.42
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.42
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.42
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.42
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.41
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.41
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.41
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.41
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.41
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.41
PHA02882	294	putative serine/threonine kinase; Provisional	99.41
KOG0201	467	consensus Serine/threonine protein kinase [Signal	99.4
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.4
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.4
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.4
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.4
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.4
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.4
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.4
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.39
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.38
PTZ00283	496	serine/threonine protein kinase; Provisional	99.38
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.38
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.38
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.38
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.38
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.37
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.37
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.36
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.36
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.36
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.36
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.36
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.35
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.35
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.35
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.35
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.35
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.34
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.34
KOG0596	677	consensus Dual specificity; serine/threonine and t	99.34
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.34
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.34
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.33
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.33
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.33
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.33
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.33
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.33
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.33
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.33
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.32
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.32
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.32
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.32
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.32
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.32
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.31
KOG0198	313	consensus MEKK and related serine/threonine protei	99.31
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.31
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.31
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.31
PTZ00267	478	NIMA-related protein kinase; Provisional	99.3
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.3
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.3
KOG0578	550	consensus p21-activated serine/threonine protein k	99.3
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.3
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.29
KOG0582	516	consensus Ste20-like serine/threonine protein kina	99.29
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.29
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.29
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.29
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.29
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.29
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.29
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.28
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.28
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.28
PTZ00284	467	protein kinase; Provisional	99.28
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.28
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.28
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.27
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.27
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.27
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.27
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.27
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.27
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.27
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.27
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.27
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.26
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.26
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.26
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.26
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.26
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.26
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.25
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.25
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.25
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.25
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.25
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.25
KOG0575	592	consensus Polo-like serine/threonine protein kinas	99.25
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.24
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.24
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.24
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.24
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.24
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.24
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.23
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.23
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.23
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.23
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.23
PHA03207	392	serine/threonine kinase US3; Provisional	99.23
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.23
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.22
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.22
PTZ00036	440	glycogen synthase kinase; Provisional	99.22
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.22
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.22
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.22
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.22
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.22
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.22
PLN00181	793	protein SPA1-RELATED; Provisional	99.21
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.21
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.21
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.21
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.2
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.2
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.2
PHA03212	391	serine/threonine kinase US3; Provisional	99.2
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	99.2
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.2
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.2
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.19
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.19
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.19
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.19
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.18
KOG1989	738	consensus ARK protein kinase family [Signal transd	99.18
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.18
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.18
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.18
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.18
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.18
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.18
PHA03209	357	serine/threonine kinase US3; Provisional	99.17
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.17
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.17
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.17
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.17
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.17
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.17
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.16
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.16
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.16
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.16
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.15
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.15
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.15
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.15
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.15
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.15
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.15
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.14
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.14
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.14
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.14
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.14
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.14
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.14
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.14
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.13
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.13
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.13
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.13
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.12
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.12
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.12
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.12
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.11
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.11
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.11
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.11
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.11
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.11
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.11
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.1
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.1
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.1
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.1
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.1
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.1
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.1
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.1
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.1
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.09
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.08
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.08
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.08
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.08
KOG0589	426	consensus Serine/threonine protein kinase [General	99.08
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.08
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.08
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.08
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.07
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.07
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.07
PHA03210	501	serine/threonine kinase US3; Provisional	99.06
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.06
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.06
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.05
PLN00009	294	cyclin-dependent kinase A; Provisional	99.05
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.05
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.05
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.05
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.04
PHA03211	461	serine/threonine kinase US3; Provisional	99.04
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.04
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.03
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.03
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.03
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.03
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.02
KOG0694	694	consensus Serine/threonine protein kinase [Signal	99.02
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.02
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	99.01
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	98.99
KOG0583	370	consensus Serine/threonine protein kinase [Signal	98.99
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	98.98
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	98.97
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	98.97
KOG0610	459	consensus Putative serine/threonine protein kinase	98.96
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	98.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	98.95
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	98.95
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	98.94
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	98.93
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	98.92
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	98.9
KOG1290	590	consensus Serine/threonine protein kinase [Signal	98.87
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	98.86
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	98.86
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	98.86
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	98.85
KOG0598	357	consensus Ribosomal protein S6 kinase and related	98.84
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	98.84
KOG4717	864	consensus Serine/threonine protein kinase [Signal	98.83
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	98.83
KOG0661	538	consensus MAPK related serine/threonine protein ki	98.82
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	98.82
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	98.81
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	98.81
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	98.81
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	98.78
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	98.75
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	98.74
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	98.74
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	98.74
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	98.71
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	98.69
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	98.69
KOG0605	550	consensus NDR and related serine/threonine kinases	98.69
KOG0577	948	consensus Serine/threonine protein kinase [Signal	98.68
KOG0584	632	consensus Serine/threonine protein kinase [General	98.68
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	98.68
KOG2052	513	consensus Activin A type IB receptor, serine/threo	98.64
KOG0696	683	consensus Serine/threonine protein kinase [Signal	98.63
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	98.63
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	98.62
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	98.61
KOG0595	429	consensus Serine/threonine-protein kinase involved	98.57
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	98.54
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	98.53
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.52
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	98.5
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	98.47
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	98.45
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	98.45
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	98.39
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	98.34
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	98.33
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	98.29
KOG0695	593	consensus Serine/threonine protein kinase [Signal	98.29
KOG0690	516	consensus Serine/threonine protein kinase [Signal	98.28
KOG1027	903	consensus Serine/threonine protein kinase and endo	98.26
KOG0611	668	consensus Predicted serine/threonine protein kinas	98.22
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	98.21
KOG3653	534	consensus Transforming growth factor beta/activin	98.19
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	98.18
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	98.13
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	98.02
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	97.92
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	97.92
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	97.91
KOG0586	596	consensus Serine/threonine protein kinase [General	97.9
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	97.88
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	97.81
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	97.8
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	97.79
PLN03224	507	probable serine/threonine protein kinase; Provisio	97.79
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	97.75
KOG0590	601	consensus Checkpoint kinase and related serine/thr	97.69
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	97.4
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	97.37
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	97.28
KOG0606	1205	consensus Microtubule-associated serine/threonine	97.27
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	97.21
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	97.21
KOG1167	418	consensus Serine/threonine protein kinase of the C	96.93
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	96.83
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	96.69
KOG0607	463	consensus MAP kinase-interacting kinase and relate	96.66
KOG0576	829	consensus Mitogen-activated protein kinase kinase	96.38
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	96.24
KOG1266	458	consensus Protein kinase [Signal transduction mech	95.94
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	95.67
COG0515	384	SPS1 Serine/threonine protein kinase [General func	95.62
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	95.62
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	95.15
KOG1093	725	consensus Predicted protein kinase (contains TBC a	93.93
KOG2137	700	consensus Protein kinase [Signal transduction mech	93.11
KOG0606	1205	consensus Microtubule-associated serine/threonine	92.7
KOG0590	601	consensus Checkpoint kinase and related serine/thr	88.79
COG4248	637	Uncharacterized protein with protein kinase and he	87.03

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.81  E-value=6e-21  Score=139.10  Aligned_cols=96  Identities=21%  Similarity=0.245  Sum_probs=74.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+++||.+||||||||+|||+++ |+.||....  ++..+            +.+..+-....        |..|+
T Consensus       674 pEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS--n~EVI------------e~i~~g~lL~~--------Pe~CP  731 (774)
T KOG1026|consen  674 PESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS--NQEVI------------ECIRAGQLLSC--------PENCP  731 (774)
T ss_pred             HHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc--hHHHH------------HHHHcCCcccC--------CCCCC
Confidence            799999999999999999999999999 999986532  22222            22222222232        33888


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE  118 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~  118 (127)
                      ..++.+|+.||+.+|.+||+|++|...|+...+......
T Consensus       732 ~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~~  770 (774)
T KOG1026|consen  732 TEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKYS  770 (774)
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCcccc
Confidence            999999999999999999999999999998776655443

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=99.80  E-value=2.6e-20  Score=129.94  Aligned_cols=91  Identities=22%  Similarity=0.302  Sum_probs=70.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.||.+||||||||+|||++| |+.|+...     ...+.+.         .++..        .++..|..|+
T Consensus       373 PEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~ev~~---------~le~G--------yRlp~P~~CP  430 (468)
T KOG0197|consen  373 PEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEEVLE---------LLERG--------YRLPRPEGCP  430 (468)
T ss_pred             HHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHHHHH---------HHhcc--------CcCCCCCCCC
Confidence            899999999999999999999999999 89897632     1222222         22221        1233344788


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..++++|..||+.+|.+||||..+...|+.+...
T Consensus       431 ~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~  464 (468)
T KOG0197|consen  431 DEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS  464 (468)
T ss_pred             HHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence            8999999999999999999999888888877654

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.79  E-value=4.5e-19  Score=122.61  Aligned_cols=105  Identities=30%  Similarity=0.505  Sum_probs=88.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccc-cCCCcHHHHHHhhcCC-ccccccccccc-cCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF-EGDLNLHRFARMALPD-HVVYIVDPILL-NDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~   77 (127)
                      |||+..|.++.++||||||++++|+++|+.+.+... .....+..|++..+.. ...+++|+++. ...+.       ..
T Consensus       247 PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~-------~~  319 (361)
T KOG1187|consen  247 PEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD-------EK  319 (361)
T ss_pred             hhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCCh-------HH
Confidence            899999999999999999999999999999887544 4455689999877776 78999999987 33321       14


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ....+..++.+|++.+|..||+|.+|+..|+.+..
T Consensus       320 ~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~  354 (361)
T KOG1187|consen  320 EVKKLAELALRCLRPDPKERPTMSQVVKELEGILS  354 (361)
T ss_pred             HHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence            67789999999999999999999999999965543

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.73  E-value=7e-19  Score=132.04  Aligned_cols=95  Identities=20%  Similarity=0.298  Sum_probs=72.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.|+.++|||||||++||+++ |..||.....  ..+...+   ..+.       ++          ..|..|+
T Consensus       873 PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n--~~v~~~~---~~gg-------RL----------~~P~~CP  930 (1025)
T KOG1095|consen  873 PESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN--FEVLLDV---LEGG-------RL----------DPPSYCP  930 (1025)
T ss_pred             HHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcch--HHHHHHH---HhCC-------cc----------CCCCCCC
Confidence            789999999999999999999999999 9999864321  1111111   1110       11          1234788


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      ..++++|..||+.+|++||+|..++..+..+.+.....
T Consensus       931 ~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~  968 (1025)
T KOG1095|consen  931 EKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT  968 (1025)
T ss_pred             hHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence            89999999999999999999999999999888776544

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=99.73  E-value=6.9e-18  Score=116.51  Aligned_cols=95  Identities=21%  Similarity=0.302  Sum_probs=69.7

Q ss_pred             CCccc--CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGL--GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~--~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++.  ...|+.++|||||||++||+++|+.||..... .+ ....+-  ...     ..+.+            +..+
T Consensus       213 PEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~-~~~~v~--~~~-----~Rp~~------------p~~~  271 (362)
T KOG0192|consen  213 PEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQ-VASAVV--VGG-----LRPPI------------PKEC  271 (362)
T ss_pred             hhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HH-HHHHHH--hcC-----CCCCC------------CccC
Confidence            78888  56899999999999999999999999875432 11 111110  011     11111            1145


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ...+..++.+||..+|..||+|.+++..|+.+......
T Consensus       272 ~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~  309 (362)
T KOG0192|consen  272 PPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS  309 (362)
T ss_pred             CHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence            66888999999999999999999999999998876653

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.73  E-value=2.4e-17  Score=126.01  Aligned_cols=108  Identities=22%  Similarity=0.410  Sum_probs=84.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-ccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++||+++|+.|++........+..|++..+.. .....+++.+.....      .+....
T Consensus       847 PE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~  920 (968)
T PLN00113        847 PETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVS------VNQNEI  920 (968)
T ss_pred             cccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCC------ccHHHH
Confidence            8898889999999999999999999999999876555556677787765544 444555665543221      122456


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus       921 ~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~~~  955 (968)
T PLN00113        921 VEVMNLALHCTATDPTARPCANDVLKTLESASRSS  955 (968)
T ss_pred             HHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhccc
Confidence            67889999999999999999999999999887643

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.68  E-value=2.2e-16  Score=99.01  Aligned_cols=98  Identities=18%  Similarity=0.117  Sum_probs=65.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||++||+++|+.|+.........+..+...........    +.           .+.....
T Consensus        73 PE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~-----------~~~~~~~  137 (176)
T smart00750       73 PEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRD----RS-----------NLESVSA  137 (176)
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccc----cc-----------cHHHHHh
Confidence            78888899999999999999999999999998543211111111111111100000    00           0112222


Q ss_pred             --HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           81 --SMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        81 --~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                        .+.+++.+||..+|.+||++.+++..+..+..+
T Consensus       138 ~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~  172 (176)
T smart00750      138 ARSFADFMRVCASRLPQRREAANHYLAHCRALFAE  172 (176)
T ss_pred             hhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence              689999999999999999999999888766544

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.67  E-value=1.3e-16  Score=114.49  Aligned_cols=93  Identities=18%  Similarity=0.199  Sum_probs=73.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.++..+|+.+||||-||+.+||++. |.+||...-.              ..+...+...        .+...|+.|+
T Consensus       561 PESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN--------------sDVI~~iEnG--------eRlP~P~nCP  618 (974)
T KOG4257|consen  561 PESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN--------------SDVIGHIENG--------ERLPCPPNCP  618 (974)
T ss_pred             ccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc--------------cceEEEecCC--------CCCCCCCCCC
Confidence            899999999999999999999999988 9999863211              1122222222        2233455888


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..++.++.+||+.+|.+||.|+++...|+.+++...
T Consensus       619 p~LYslmskcWayeP~kRPrftei~~~lsdv~qeek  654 (974)
T KOG4257|consen  619 PALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEEK  654 (974)
T ss_pred             hHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHhh
Confidence            999999999999999999999999999999988543

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.67  E-value=4.2e-17  Score=118.13  Aligned_cols=86  Identities=22%  Similarity=0.275  Sum_probs=66.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.|+.++|||+|||.+|||++ |..||-....              ..+.+.+|.+        .....++.|.
T Consensus       284 PEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g--------------~qIL~~iD~~--------erLpRPk~cs  341 (1039)
T KOG0199|consen  284 PESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG--------------IQILKNIDAG--------ERLPRPKYCS  341 (1039)
T ss_pred             HhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH--------------HHHHHhcccc--------ccCCCCCCCh
Confidence            799999999999999999999999999 8889753221              0223333322        2333456899


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      +++++++..||+.+|++||+|..+.+.+-
T Consensus       342 edIY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  342 EDIYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             HHHHHHHHHhccCCccccccHHHHHHhHH
Confidence            99999999999999999999999875543

>PHA02988 hypothetical protein; Provisional

Probab=99.67  E-value=5.3e-17  Score=109.09  Aligned_cols=91  Identities=23%  Similarity=0.278  Sum_probs=63.5

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+..  +.++.++|||||||++||+++|+.||....     .............    .+.+.            ..+
T Consensus       189 PE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~~~~~~~i~~~~~----~~~~~------------~~~  247 (283)
T PHA02988        189 YKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----TKEIYDLIINKNN----SLKLP------------LDC  247 (283)
T ss_pred             HHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcCC----CCCCC------------CcC
Confidence            566654  678999999999999999999999986432     1111111111100    01111            134


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      +..+.+++.+||+.+|.+||++.+++..|+.+.+
T Consensus       248 ~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~  281 (283)
T PHA02988        248 PLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF  281 (283)
T ss_pred             cHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence            5578899999999999999999999999987654

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.65  E-value=8.2e-18  Score=122.62  Aligned_cols=89  Identities=19%  Similarity=0.315  Sum_probs=70.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCcccccccc--ccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDP--ILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+..++|+.+||||||||++||+++ |..||=+..  ++.            +.+.++.  ++..          |.+
T Consensus       803 PEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS--NQd------------VIkaIe~gyRLPp----------PmD  858 (996)
T KOG0196|consen  803 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQD------------VIKAIEQGYRLPP----------PMD  858 (996)
T ss_pred             hhHhhhcccCchhhccccceEEEEecccCCCcccccc--hHH------------HHHHHHhccCCCC----------CCC
Confidence            788999999999999999999999887 999974321  111            2222222  3332          348


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      |+..++.||+.||+.+...||.|.+++..|.++...
T Consensus       859 CP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn  894 (996)
T KOG0196|consen  859 CPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN  894 (996)
T ss_pred             CcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence            999999999999999999999999999999988654

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.64  E-value=1e-16  Score=109.84  Aligned_cols=90  Identities=22%  Similarity=0.362  Sum_probs=66.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....|+.++||||||+++||+++ |+.|+.+....+  +..++.+                    |.+..+|-+|+
T Consensus       467 lEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE--m~~ylkd--------------------GyRlaQP~NCP  524 (563)
T KOG1024|consen  467 LEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE--MEHYLKD--------------------GYRLAQPFNCP  524 (563)
T ss_pred             HHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH--HHHHHhc--------------------cceecCCCCCc
Confidence            355667789999999999999999999 999986432111  1111111                    11222333888


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      .++..+|..||+..|++||++.+++..|.+.-.
T Consensus       525 DeLf~vMacCWallpeeRPsf~Qlv~cLseF~~  557 (563)
T KOG1024|consen  525 DELFTVMACCWALLPEERPSFSQLVICLSEFHT  557 (563)
T ss_pred             HHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999998876543

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.63  E-value=2.1e-16  Score=113.79  Aligned_cols=95  Identities=19%  Similarity=0.222  Sum_probs=72.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.|+.++|||+||++|||+.| |-.||.....      .        ++..++.....        +..|..|+
T Consensus       435 PEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl------S--------qVY~LLEkgyR--------M~~PeGCP  492 (1157)
T KOG4278|consen  435 PESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL------S--------QVYGLLEKGYR--------MDGPEGCP  492 (1157)
T ss_pred             cccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH------H--------HHHHHHhcccc--------ccCCCCCC
Confidence            788999999999999999999999988 7788764221      0        11222222111        11233678


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      +.++.+|+.||+-+|.+||+|.++...++.++.+..-.
T Consensus       493 pkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~sSis  530 (1157)
T KOG4278|consen  493 PKVYELMRACWNWSPSDRPSFAEIHQAFETMFSSSSIS  530 (1157)
T ss_pred             HHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcccccc
Confidence            89999999999999999999999999999998776533

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.63  E-value=2.5e-16  Score=115.49  Aligned_cols=91  Identities=22%  Similarity=0.326  Sum_probs=68.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....|+.++|||||||++||+++ |..||..... ...+..+++.                    |.+...|..|.
T Consensus       490 pEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~-~~~l~~~l~~--------------------G~r~~~P~~c~  548 (609)
T KOG0200|consen  490 PESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPP-TEELLEFLKE--------------------GNRMEQPEHCS  548 (609)
T ss_pred             HHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCc-HHHHHHHHhc--------------------CCCCCCCCCCC
Confidence            688888999999999999999999999 8889864210 1111111211                    11223344778


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      .+++.+|..||+.+|++||+|.++...+...+.
T Consensus       549 ~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~  581 (609)
T KOG0200|consen  549 DEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQ  581 (609)
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHH
Confidence            899999999999999999999999999998654

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.61  E-value=7.3e-16  Score=105.66  Aligned_cols=91  Identities=20%  Similarity=0.232  Sum_probs=64.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||+++||+++ |..||....... .+....   ..+..     ...            +....
T Consensus       245 PE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~---~~~~~-----~~~------------~~~~~  303 (338)
T cd05102         245 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRL---KDGTR-----MRA------------PENAT  303 (338)
T ss_pred             cHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHH---hcCCC-----CCC------------CCCCC
Confidence            677778889999999999999999997 998986432111 111111   11100     000            01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+..
T Consensus       304 ~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~  336 (338)
T cd05102         304 PEIYRIMLACWQGDPKERPTFSALVEILGDLLQ  336 (338)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            567899999999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.60  E-value=9.6e-16  Score=102.59  Aligned_cols=103  Identities=14%  Similarity=0.117  Sum_probs=64.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-ccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++|+++|+.|+.................... .....++.......        +....
T Consensus       179 PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  250 (283)
T cd05080         179 VECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPC--------PKNCP  250 (283)
T ss_pred             HhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCC--------CCCCC
Confidence            5666677889999999999999999999988753221100010000000000 11111111111111        11345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++..||+.+|.+||++.+++..|+.+.
T Consensus       251 ~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~  282 (283)
T cd05080         251 QEVYILMKNCWETEAKFRPTFRSLIPILKEMH  282 (283)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence            67899999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=99.58  E-value=1.8e-15  Score=107.91  Aligned_cols=87  Identities=18%  Similarity=0.244  Sum_probs=64.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.....+.|+||||||||||||+||..||.+......         .++    +=...+...        .|..|+.
T Consensus       280 PEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI---------IwG----VGsNsL~Lp--------vPstcP~  338 (904)
T KOG4721|consen  280 PEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI---------IWG----VGSNSLHLP--------VPSTCPD  338 (904)
T ss_pred             HHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee---------EEe----ccCCccccc--------CcccCch
Confidence            7899999999999999999999999999999976432211         111    000111111        1226677


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      -+.-++..||+..|..||+|++++..|.
T Consensus       339 GfklL~Kqcw~sKpRNRPSFrqil~Hld  366 (904)
T KOG4721|consen  339 GFKLLLKQCWNSKPRNRPSFRQILLHLD  366 (904)
T ss_pred             HHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence            7888999999999999999999987665

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.57  E-value=7.2e-16  Score=102.28  Aligned_cols=85  Identities=21%  Similarity=0.288  Sum_probs=56.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||+++||+++ |+.|+....     ...+...........     .            +..+.
T Consensus       174 PE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~-----~~~~~~~~~~~~~~~-----~------------~~~~~  231 (259)
T PF07714_consen  174 PEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD-----NEEIIEKLKQGQRLP-----I------------PDNCP  231 (259)
T ss_dssp             HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC-----HHHHHHHHHTTEETT-----S------------BTTSB
T ss_pred             ccccccccccccccccccccccccccccccccccccc-----cccccccccccccce-----e------------ccchh
Confidence            566667778999999999999999999 678875331     112222111111100     0            11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ..+..++..||+.+|.+||++.+++..|
T Consensus       232 ~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  232 KDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            5678999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.57  E-value=1.8e-15  Score=101.18  Aligned_cols=87  Identities=20%  Similarity=0.287  Sum_probs=62.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||+++|+++ |..|+.....  ..+...+.   ....         ...        +..++
T Consensus       195 PE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~~~~~i~---~~~~---------~~~--------~~~~~  252 (283)
T cd05048         195 PEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QEVIEMIR---SRQL---------LPC--------PEDCP  252 (283)
T ss_pred             HHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHH---cCCc---------CCC--------cccCC
Confidence            677777889999999999999999998 8888754221  11111111   1100         001        11455


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++..||+.+|.+||++.+|...|++
T Consensus       253 ~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05048         253 ARVYALMIECWNEIPARRPRFKDIHTRLRS  282 (283)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence            778999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.56  E-value=1e-14  Score=98.12  Aligned_cols=92  Identities=23%  Similarity=0.327  Sum_probs=65.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++||||||++++|+++ |+.|+.....  .......   ..+....     .            +...+
T Consensus       194 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~---~~~~~~~-----~------------~~~~~  251 (291)
T cd05094         194 PESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN--TEVIECI---TQGRVLE-----R------------PRVCP  251 (291)
T ss_pred             hHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---hCCCCCC-----C------------CccCC
Confidence            677778889999999999999999998 9998753221  1111111   1111000     0            01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++.+||+.+|.+||++.+|++.|..+....
T Consensus       252 ~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~  286 (291)
T cd05094         252 KEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT  286 (291)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence            56789999999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.55  E-value=4.9e-15  Score=101.85  Aligned_cols=91  Identities=20%  Similarity=0.228  Sum_probs=64.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++|||||||+++|+++ |..|+......+ .+....   .....     ...            +....
T Consensus       244 PE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~---~~~~~-----~~~------------~~~~~  302 (337)
T cd05054         244 PESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRL---KEGTR-----MRA------------PEYAT  302 (337)
T ss_pred             cHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHH---hccCC-----CCC------------CccCC
Confidence            677778889999999999999999997 988875422111 011111   00000     000            01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++.+||+.+|.+||++.+++..|+.+++
T Consensus       303 ~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~  335 (337)
T cd05054         303 PEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ  335 (337)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence            568899999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.54  E-value=2.4e-14  Score=94.93  Aligned_cols=91  Identities=21%  Similarity=0.236  Sum_probs=63.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|+||||+++||+++|..|+...   ......+........     .+...           ......
T Consensus       175 PE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~---~~~~~~~~~~~~~~~-----~~~~~-----------~~~~~~  235 (267)
T cd08228         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD---KMNLFSLCQKIEQCD-----YPPLP-----------TEHYSE  235 (267)
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccc---cccHHHHHHHHhcCC-----CCCCC-----------hhhcCH
Confidence            67777778899999999999999999999997532   111222222111110     01110           113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      .+.+++.+||..+|.+||++.+|+..|.++
T Consensus       236 ~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~  265 (267)
T cd08228         236 KLRELVSMCIYPDPDQRPDIGYVHQIAKQM  265 (267)
T ss_pred             HHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence            688999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.54  E-value=5.3e-15  Score=103.01  Aligned_cols=90  Identities=19%  Similarity=0.242  Sum_probs=62.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||++||+++ |+.||....... .+.......+        ......            ..+
T Consensus       283 PE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~--------~~~~~~------------~~~  341 (374)
T cd05106         283 PESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGY--------QMSRPD------------FAP  341 (374)
T ss_pred             HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHccc--------CccCCC------------CCC
Confidence            677777889999999999999999997 999986432111 1111111100        000000            123


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++..||+.+|.+||++.+|++.|+++.
T Consensus       342 ~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         342 PEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            56788999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.53  E-value=9e-15  Score=97.90  Aligned_cols=90  Identities=20%  Similarity=0.294  Sum_probs=62.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||+++||+++ |..|+....  .....+.+.   .+...  ..+.               .+.
T Consensus       180 pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~~~~~---~~~~~--~~~~---------------~~~  237 (279)
T cd05111         180 LESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMR--PHEVPDLLE---KGERL--AQPQ---------------ICT  237 (279)
T ss_pred             HHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH---CCCcC--CCCC---------------CCC
Confidence            677777889999999999999999998 888875321  111112211   10000  0000               223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+..++.+||..+|.+||++.++...|..+..
T Consensus       238 ~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~  270 (279)
T cd05111         238 IDVYMVMVKCWMIDENVRPTFKELANEFTRMAR  270 (279)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence            456788999999999999999999998887664

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.53  E-value=7e-15  Score=102.43  Aligned_cols=89  Identities=21%  Similarity=0.281  Sum_probs=61.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||+++||+++ |..|+...... ..+...+.....    . ..+               ....
T Consensus       285 PE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~----~-~~~---------------~~~~  343 (375)
T cd05104         285 PESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYR----M-LSP---------------ECAP  343 (375)
T ss_pred             hhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCcc----C-CCC---------------CCCC
Confidence            677778889999999999999999998 88887543211 111122111110    0 000               0223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++..||+.+|.+||++.+++..|++.
T Consensus       344 ~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         344 SEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            4678999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.53  E-value=6.3e-15  Score=97.42  Aligned_cols=87  Identities=20%  Similarity=0.199  Sum_probs=60.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|+||||++++|+++ |..||.....  ..+...+.   .+..     +....            ..+
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~---~~~~-----~~~~~------------~~~  224 (257)
T cd05116         167 PECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIE---SGER-----MECPQ------------RCP  224 (257)
T ss_pred             HhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---CCCC-----CCCCC------------CCC
Confidence            566666778889999999999999998 8989864221  11112111   1100     01111            334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++..||+.+|.+||++.+|+..|++
T Consensus       225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~  254 (257)
T cd05116         225 PEMYDLMKLCWTYGVDERPGFAVVELRLRN  254 (257)
T ss_pred             HHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence            567899999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.53  E-value=2.2e-14  Score=96.41  Aligned_cols=92  Identities=22%  Similarity=0.289  Sum_probs=64.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++||||||+++++|++ |..|+.....  ......+   ..+....     ...            ...
T Consensus       191 PE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~--~~~~~~i---~~~~~~~-----~~~------------~~~  248 (288)
T cd05093         191 PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIECI---TQGRVLQ-----RPR------------TCP  248 (288)
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHH---HcCCcCC-----CCC------------CCC
Confidence            677777888999999999999999998 8888753221  1111111   1111000     000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++.+||+.+|.+||++.++...|+.+....
T Consensus       249 ~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~~  283 (288)
T cd05093         249 KEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKAS  283 (288)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHhc
Confidence            46899999999999999999999999999888654

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.53  E-value=8.8e-15  Score=97.02  Aligned_cols=88  Identities=19%  Similarity=0.242  Sum_probs=61.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||++++|+++ |..|+....     ...........     ......            ...+
T Consensus       174 PE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~-----~~~~~~------------~~~~  231 (263)
T cd05052         174 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQVYELLEKG-----YRMERP------------EGCP  231 (263)
T ss_pred             HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCC-----CCCCCC------------CCCC
Confidence            677777888999999999999999998 888875321     11111111111     000110            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.++...|+.+
T Consensus       232 ~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         232 PKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            5788899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.53  E-value=3.8e-14  Score=95.65  Aligned_cols=93  Identities=18%  Similarity=0.178  Sum_probs=65.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+...+.++.++||||||++++||++ |..||....     ..........+     ......            ....
T Consensus       187 PE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~-----~~~~~~~~~~~-----~~~~~~------------~~~~  244 (297)
T cd05089         187 IESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQG-----YRMEKP------------RNCD  244 (297)
T ss_pred             chhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHhcC-----CCCCCC------------CCCC
Confidence            677777788999999999999999997 988875322     11111111111     000000            1234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++.+||+.+|.+||++.+++..|+.+.....
T Consensus       245 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~  280 (297)
T cd05089         245 DEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK  280 (297)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            567899999999999999999999999998887653

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.52  E-value=4.6e-14  Score=93.44  Aligned_cols=91  Identities=21%  Similarity=0.252  Sum_probs=62.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|+||||+++|++++|+.|+...   .............+..     +.+..           .....
T Consensus       175 pE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~---~~~~~~~~~~~~~~~~-----~~~~~-----------~~~~~  235 (267)
T cd08224         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD---KMNLYSLCKKIEKCDY-----PPLPA-----------DHYSE  235 (267)
T ss_pred             HHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccC---CccHHHHHhhhhcCCC-----CCCCh-----------hhcCH
Confidence            67777778899999999999999999999997532   1112222111111100     00000           13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      .+.+++..||..+|.+||++.+++..|..+
T Consensus       236 ~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~  265 (267)
T cd08224         236 ELRDLVSRCINPDPEKRPDISYVLQVAKEM  265 (267)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence            678999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.52  E-value=2.7e-14  Score=95.26  Aligned_cols=86  Identities=24%  Similarity=0.365  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||++++|+++ |..|+....  .......+.   .+.... .                +....
T Consensus       193 PE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~--~~~~~~~~~---~~~~~~-~----------------~~~~~  250 (280)
T cd05049         193 PESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLS--NEEVIECIT---QGRLLQ-R----------------PRTCP  250 (280)
T ss_pred             hhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH---cCCcCC-C----------------CCCCC
Confidence            778888889999999999999999998 999875322  111111111   110000 0                01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.++++.|+
T Consensus       251 ~~~~~li~~~l~~~p~~Rp~~~eil~~l~  279 (280)
T cd05049         251 SEVYDIMLGCWKRDPQQRINIKDIHERLQ  279 (280)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence            56789999999999999999999998885

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.52  E-value=1.1e-14  Score=96.24  Aligned_cols=88  Identities=20%  Similarity=0.251  Sum_probs=62.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+..++.++.++||||||++++++++ |..||....  ...+...+.....   .         ..        +....
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~~~---~---------~~--------~~~~~  224 (257)
T cd05060         167 PECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESGER---L---------PR--------PEECP  224 (257)
T ss_pred             HHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcCCc---C---------CC--------CCCCC
Confidence            677777888999999999999999998 898986422  1112222211100   0         00        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||..+|.+||++.++...|+.+
T Consensus       225 ~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~  255 (257)
T cd05060         225 QEIYSIMLSCWKYRPEDRPTFSELESTFRRD  255 (257)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence            5678999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.51  E-value=1.6e-14  Score=95.96  Aligned_cols=88  Identities=17%  Similarity=0.346  Sum_probs=61.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||++++|+++ |..|+....  ...+.....   .+...     ..            +....
T Consensus       184 pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~--~~~~~~~~~---~~~~~-----~~------------~~~~~  241 (273)
T cd05035         184 IESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVE--NHEIYDYLR---HGNRL-----KQ------------PEDCL  241 (273)
T ss_pred             HhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC-----CC------------CcCCC
Confidence            566667778999999999999999999 888875422  111222221   11100     00            11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.++...|..+
T Consensus       242 ~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         242 DELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5788999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.51  E-value=1.2e-14  Score=97.71  Aligned_cols=91  Identities=21%  Similarity=0.330  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++||||||++++|+++ |+.|+....  ...+.......+        ......            ...
T Consensus       198 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~--------~~~~~~------------~~~  255 (290)
T cd05045         198 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA--PERLFNLLKTGY--------RMERPE------------NCS  255 (290)
T ss_pred             HHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCC--------CCCCCC------------CCC
Confidence            566666778999999999999999998 888875321  111222211111        000001            334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+++..+
T Consensus       256 ~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~~  289 (290)
T cd05045         256 EEMYNLMLTCWKQEPDKRPTFADISKELEKMMVK  289 (290)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHHHHhc
Confidence            5778999999999999999999999999988754

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.51  E-value=4.9e-14  Score=93.22  Aligned_cols=90  Identities=19%  Similarity=0.323  Sum_probs=60.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcC-CCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETT-KKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++|+++| ..|+...     ..............     +..            +...+
T Consensus       171 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~~~~~~~~~~~~~~-----~~~------------~~~~~  228 (262)
T cd05058         171 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----DSFDITVYLLQGRR-----LLQ------------PEYCP  228 (262)
T ss_pred             hhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHhcCCC-----CCC------------CCcCC
Confidence            5666777889999999999999999995 4555421     11111111111100     000            00223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++..||+.+|.+||++.+++..|+++..
T Consensus       229 ~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~  261 (262)
T cd05058         229 DPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS  261 (262)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence            467899999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.51  E-value=1.5e-14  Score=95.99  Aligned_cols=88  Identities=17%  Similarity=0.286  Sum_probs=61.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||+++||+++ |..|+.....     ..........         .....        +....
T Consensus       179 PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~-----~~~~~~i~~~---------~~~~~--------~~~~~  236 (268)
T cd05063         179 PEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN-----HEVMKAINDG---------FRLPA--------PMDCP  236 (268)
T ss_pred             HHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhcC---------CCCCC--------CCCCC
Confidence            566777788999999999999999987 9999753211     1111111111         00000        00334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.+|...|.++
T Consensus       237 ~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         237 SAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            5678999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.51  E-value=1.3e-14  Score=96.39  Aligned_cols=88  Identities=17%  Similarity=0.214  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||+++||+++ |..||.....  ..+...+.   ...     ....            +..++
T Consensus       177 PE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~---~~~-----~~~~------------~~~~~  234 (266)
T cd05064         177 PEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--QDVIKAVE---DGF-----RLPA------------PRNCP  234 (266)
T ss_pred             HHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHH---CCC-----CCCC------------CCCCC
Confidence            677777889999999999999999775 9999854221  11111111   110     0000            11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++..||+.+|.+||++.++...|+++
T Consensus       235 ~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         235 NLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            5678899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.50  E-value=4.5e-14  Score=94.03  Aligned_cols=89  Identities=25%  Similarity=0.282  Sum_probs=61.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||++++|+++ |..||....     ............       ...  .        +....
T Consensus       180 pE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~-----~~~~~~~~~~~~-------~~~--~--------~~~~~  237 (270)
T cd05047         180 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQGY-------RLE--K--------PLNCD  237 (270)
T ss_pred             hHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccC-----HHHHHHHHhCCC-------CCC--C--------CCcCC
Confidence            567777788999999999999999997 888875321     111111111100       000  0        00233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++.+||..+|.+||++.+++..|..++
T Consensus       238 ~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         238 DEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            46789999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.50  E-value=2e-14  Score=96.60  Aligned_cols=89  Identities=19%  Similarity=0.293  Sum_probs=61.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++|||||||++||+++ |..|+....     ............         ....        +....
T Consensus       203 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~---------~~~~--------~~~~~  260 (293)
T cd05053         203 PEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----VEELFKLLKEGY---------RMEK--------PQNCT  260 (293)
T ss_pred             HHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCC-----HHHHHHHHHcCC---------cCCC--------CCCCC
Confidence            677777888999999999999999997 888875321     111111111110         0000        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++.+||..+|.+|||+.+++..|+.+.
T Consensus       261 ~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         261 QELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            56789999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.50  E-value=1.9e-14  Score=97.92  Aligned_cols=91  Identities=22%  Similarity=0.282  Sum_probs=62.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||+++||+++ |+.|+.....  ..+.....   ...       ..  ..        +..+.
T Consensus       180 pE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~--~~~~~~~~---~~~-------~~--~~--------~~~~~  237 (316)
T cd05108         180 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILE---KGE-------RL--PQ--------PPICT  237 (316)
T ss_pred             hHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHh---CCC-------CC--CC--------CCCCC
Confidence            567777888999999999999999987 8888753211  01111111   100       00  00        01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||..+|.+||++.+++..|..+...
T Consensus       238 ~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~  271 (316)
T cd05108         238 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  271 (316)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence            5678899999999999999999999998877543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.49  E-value=9.6e-14  Score=92.05  Aligned_cols=91  Identities=22%  Similarity=0.204  Sum_probs=62.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|+||||+++|++++|..|+.....   .........     .....+....           .....
T Consensus       175 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~-----~~~~~~~~~~-----------~~~~~  235 (267)
T cd08229         175 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKI-----EQCDYPPLPS-----------DHYSE  235 (267)
T ss_pred             HHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc---hHHHHhhhh-----hcCCCCCCCc-----------ccccH
Confidence            5667777888999999999999999999999753211   111111110     0001111111           13456


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      .+..++.+||..+|.+|||+.+|.+.+.++
T Consensus       236 ~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~  265 (267)
T cd08229         236 ELRQLVNMCINPDPEKRPDITYVYDVAKRM  265 (267)
T ss_pred             HHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence            788999999999999999999999888764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.49  E-value=4.7e-14  Score=94.37  Aligned_cols=87  Identities=20%  Similarity=0.247  Sum_probs=60.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++|+++ |..|+....     ...+..........         ..+        ..+.
T Consensus       195 PE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~~---------~~~--------~~~~  252 (283)
T cd05091         195 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS-----NQDVIEMIRNRQVL---------PCP--------DDCP  252 (283)
T ss_pred             HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHcCCcC---------CCC--------CCCC
Confidence            677777889999999999999999998 777765321     11122111111110         001        1345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+..++..||+.+|.+||++.+|+..|+.
T Consensus       253 ~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         253 AWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            668899999999999999999999988863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.49  E-value=9.9e-14  Score=94.03  Aligned_cols=93  Identities=20%  Similarity=0.317  Sum_probs=65.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++|+++ |..|+....     .............       .  ..        +....
T Consensus       211 PE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~-------~--~~--------~~~~~  268 (307)
T cd05098         211 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKEGHR-------M--DK--------PSNCT  268 (307)
T ss_pred             hHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHHcCCC-------C--CC--------CCcCC
Confidence            677777788999999999999999998 777875321     1111111111100       0  00        11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++..||..+|.+||++.+++..|..+.....
T Consensus       269 ~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~~  304 (307)
T cd05098         269 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALTS  304 (307)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHhh
Confidence            577889999999999999999999999999887743

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.49  E-value=2.6e-14  Score=95.49  Aligned_cols=90  Identities=20%  Similarity=0.383  Sum_probs=63.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||+++||+++ |+.|+....  ...+..+.....          .....          ..++
T Consensus       188 pE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~----------~~~~~----------~~~~  245 (280)
T cd05043         188 LESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLKDGY----------RLAQP----------INCP  245 (280)
T ss_pred             HHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHHcCC----------CCCCC----------CcCC
Confidence            566666778999999999999999999 999986421  111222221111          00000          0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++.+||..+|.+||++.+++..|+.+..
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~  278 (280)
T cd05043         246 DELFAVMACCWALDPEERPSFSQLVQCLTDFHA  278 (280)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence            567899999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.49  E-value=1.2e-13  Score=93.48  Aligned_cols=93  Identities=18%  Similarity=0.300  Sum_probs=65.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||++++++++ |..|+...     ................     .            +..+.
T Consensus       208 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~------------~~~~~  265 (304)
T cd05101         208 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-----PVEELFKLLKEGHRMD-----K------------PANCT  265 (304)
T ss_pred             chhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC-----CHHHHHHHHHcCCcCC-----C------------CCCCC
Confidence            677777788999999999999999998 77776422     1222221111111000     0            01344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+..++.+||+.+|.+||++.+++..|.++.....
T Consensus       266 ~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~~  301 (304)
T cd05101         266 NELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLTT  301 (304)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhhh
Confidence            677889999999999999999999999998876643

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.49  E-value=3.2e-14  Score=94.19  Aligned_cols=87  Identities=25%  Similarity=0.365  Sum_probs=61.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+..+..++.++||||||++++|+++ |+.|+....  ...+...+.   ...     .  .  ..        +....
T Consensus       173 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~---~~~-----~--~--~~--------~~~~~  230 (261)
T cd05068         173 PEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT--NAEVLQQVD---QGY-----R--M--PC--------PPGCP  230 (261)
T ss_pred             ccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH---cCC-----C--C--CC--------CCcCC
Confidence            677777888999999999999999999 888875321  111111111   000     0  0  00        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+..++.+||+.+|.+||++.++...|+.
T Consensus       231 ~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~  260 (261)
T cd05068         231 KELYDIMLDCWKEDPDDRPTFETLQWKLED  260 (261)
T ss_pred             HHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence            577889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.48  E-value=3.3e-14  Score=101.61  Aligned_cols=90  Identities=22%  Similarity=0.312  Sum_probs=64.6

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..|+..+|||+|||++|||++|.-||.....+..     +++.-.+    ...+++         ......+.+++.+|+
T Consensus       568 nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqI-----ifmVGrG----~l~pd~---------s~~~s~~pk~mk~Ll  629 (678)
T KOG0193|consen  568 NPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQI-----IFMVGRG----YLMPDL---------SKIRSNCPKAMKRLL  629 (678)
T ss_pred             CCCCcccchhhhhHHHHHHHhCcCCcCCCChhhe-----EEEeccc----ccCccc---------hhhhccCHHHHHHHH
Confidence            4689999999999999999999999873222111     1111111    011111         112236778999999


Q ss_pred             hhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           87 VACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..||..++++||.|.+|+..|+.+..+.
T Consensus       630 ~~C~~~~~~eRP~F~~il~~l~~l~~~~  657 (678)
T KOG0193|consen  630 SDCWKFDREERPLFPQLLSKLEELLPSL  657 (678)
T ss_pred             HHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence            9999999999999999999998888754

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.48  E-value=1.1e-14  Score=97.23  Aligned_cols=102  Identities=19%  Similarity=0.224  Sum_probs=61.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc-CCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL-PDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||++++|+++|..|+.................. .......+........        +..+.
T Consensus       181 Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~  252 (284)
T cd05038         181 PECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPR--------PPSCP  252 (284)
T ss_pred             cHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCC--------CccCC
Confidence            56666678889999999999999999999886532111100000000000 0000000011000000        11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+..++.+||+.+|.+||++.+|+..|+.+
T Consensus       253 ~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i  283 (284)
T cd05038         253 DEVYDLMKLCWEAEPQDRPSFADLILIVDRL  283 (284)
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence            6788999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.48  E-value=2.4e-14  Score=94.80  Aligned_cols=88  Identities=24%  Similarity=0.266  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||+++||+++ |..|+.....  ......+.   .+.         ....+        ..+.
T Consensus       167 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~---~~~---------~~~~~--------~~~~  224 (257)
T cd05115         167 PECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--PEVMSFIE---QGK---------RLDCP--------AECP  224 (257)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHH---CCC---------CCCCC--------CCCC
Confidence            566666778899999999999999996 8989764211  11111111   110         00011        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++..||..+|.+||++.+|...|+.+
T Consensus       225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            6778899999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.48  E-value=2.3e-14  Score=95.89  Aligned_cols=86  Identities=24%  Similarity=0.305  Sum_probs=59.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++|||||||+++|+++ |..|+.....  .......   ....     ....            +..++
T Consensus       193 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~---~~~~-----~~~~------------~~~~~  250 (280)
T cd05092         193 PESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--TEAIECI---TQGR-----ELER------------PRTCP  250 (280)
T ss_pred             HHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--HHHHHHH---HcCc-----cCCC------------CCCCC
Confidence            677777889999999999999999998 8888753211  1111111   1110     0000            00233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.+|...|+
T Consensus       251 ~~~~~li~~cl~~~P~~Rp~~~~l~~~l~  279 (280)
T cd05092         251 PEVYAIMQGCWQREPQQRMVIKDIHSRLQ  279 (280)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence            46789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.48  E-value=3.3e-14  Score=96.29  Aligned_cols=89  Identities=19%  Similarity=0.199  Sum_probs=61.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++|+++ |..|+...... ..+......   +         .....+        ....
T Consensus       212 PE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~~~---~---------~~~~~~--------~~~~  270 (302)
T cd05055         212 PESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIKE---G---------YRMAQP--------EHAP  270 (302)
T ss_pred             HhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHHHc---C---------CcCCCC--------CCCC
Confidence            566777788999999999999999998 88887543211 111111110   0         000000        0223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||..+|.+||++.+++..|.+.
T Consensus       271 ~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         271 AEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            5688999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.48  E-value=4.1e-14  Score=95.69  Aligned_cols=93  Identities=17%  Similarity=0.213  Sum_probs=59.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc--CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET--TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..+.++.++||||||++++|+++  +..|+....  .......+...+........ .    ..        +..+
T Consensus       209 PE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~-~----~~--------~~~~  273 (304)
T cd05096         209 WECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELT--DEQVIENAGEFFRDQGRQVY-L----FR--------PPPC  273 (304)
T ss_pred             HHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCC--HHHHHHHHHHHhhhcccccc-c----cC--------CCCC
Confidence            567777889999999999999999987  445654321  11222222221111100000 0    00        1134


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      +..+.+++.+||+.+|.+||++.+|...|+
T Consensus       274 ~~~~~~li~~cl~~~p~~RPs~~~i~~~l~  303 (304)
T cd05096         274 PQGLYELMLQCWSRDCRERPSFSDIHAFLT  303 (304)
T ss_pred             CHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence            457889999999999999999999988775

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.48  E-value=4e-14  Score=93.97  Aligned_cols=86  Identities=21%  Similarity=0.365  Sum_probs=59.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++|+++ |..|+.....  ......+.   ...       ..  ..        +...+
T Consensus       182 PE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~---~~~-------~~--~~--------~~~~~  239 (269)
T cd05044         182 PESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVT---AGG-------RL--QK--------PENCP  239 (269)
T ss_pred             HHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHh---cCC-------cc--CC--------cccch
Confidence            677777889999999999999999998 8888753211  11111110   000       00  00        11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||..+|.+||++.++...|+
T Consensus       240 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~  268 (269)
T cd05044         240 DKIYQLMTNCWAQDPSERPTFDRIQEILQ  268 (269)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            56789999999999999999999998875

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.48  E-value=2.7e-14  Score=95.41  Aligned_cols=86  Identities=24%  Similarity=0.363  Sum_probs=59.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||+++|+++ |..||.....  ..+...+   ......         ..        +...+
T Consensus       190 PE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~~~~~~~---~~~~~~---------~~--------~~~~~  247 (277)
T cd05036         190 PEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--QEVMEFV---TGGGRL---------DP--------PKGCP  247 (277)
T ss_pred             HHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHH---HcCCcC---------CC--------CCCCC
Confidence            677777889999999999999999997 8888763211  1111111   111000         00        01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.+|+..|.
T Consensus       248 ~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         248 GPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            56788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.48  E-value=1.1e-13  Score=91.38  Aligned_cols=85  Identities=21%  Similarity=0.260  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||++++|+++ |+.|+....     ..........+..  ...+.               ...
T Consensus       170 PE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~--~~~~~---------------~~~  227 (256)
T cd05114         170 PEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEVVEMISRGFR--LYRPK---------------LAS  227 (256)
T ss_pred             hhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCCCC--CCCCC---------------CCC
Confidence            677777788999999999999999999 888875321     1111111111100  00010               123


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ..+..++.+||+.+|.+||++.+++..|
T Consensus       228 ~~~~~li~~c~~~~p~~Rps~~~l~~~l  255 (256)
T cd05114         228 MTVYEVMYSCWHEKPEGRPTFAELLRAI  255 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            4678999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.47  E-value=2.9e-14  Score=100.22  Aligned_cols=91  Identities=21%  Similarity=0.216  Sum_probs=63.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||+++||+++ |..|+.....+. .+...+.   .+.     ...            .+....
T Consensus       308 PE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~~~~~~~---~~~-----~~~------------~~~~~~  366 (400)
T cd05105         308 PESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-TFYNKIK---SGY-----RMA------------KPDHAT  366 (400)
T ss_pred             hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-HHHHHHh---cCC-----CCC------------CCccCC
Confidence            677777888999999999999999997 888875321110 0111111   000     000            011344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++..||+.+|.+||++.+|.+.|+++.+
T Consensus       367 ~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~  399 (400)
T cd05105         367 QEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP  399 (400)
T ss_pred             HHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence            578899999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.47  E-value=5.4e-14  Score=93.32  Aligned_cols=88  Identities=17%  Similarity=0.331  Sum_probs=61.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..|+....  ...+...+...+.  .     + .            +....
T Consensus       177 Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~--~-----~-~------------~~~~~  234 (266)
T cd05033         177 PEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--NQDVIKAVEDGYR--L-----P-P------------PMDCP  234 (266)
T ss_pred             hhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC--HHHHHHHHHcCCC--C-----C-C------------CCCCC
Confidence            677777888999999999999999998 888875321  1111111111000  0     0 0            01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.+++..|+++
T Consensus       235 ~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         235 SALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            5678999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.47  E-value=9.1e-14  Score=91.77  Aligned_cols=88  Identities=19%  Similarity=0.200  Sum_probs=60.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||++++|+++ |+.|+...     .+.........+.     .+...            ..++
T Consensus       168 PE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~-----~~~~~------------~~~~  225 (256)
T cd05082         168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI-----PLKDVVPRVEKGY-----KMDAP------------DGCP  225 (256)
T ss_pred             HHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCC-----CCCCC------------CCCC
Confidence            677777788999999999999999997 88887521     1112211111110     00010            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.++...|+.+
T Consensus       226 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         226 PVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            5678899999999999999999999988753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.47  E-value=1.2e-13  Score=91.88  Aligned_cols=88  Identities=19%  Similarity=0.353  Sum_probs=60.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+.....++.++||||||+++||+++ |+.|+....  ...+...+.   .+....     ..            ....
T Consensus       183 pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~---~~~~~~-----~~------------~~~~  240 (272)
T cd05075         183 IESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE--NSEIYDYLR---QGNRLK-----QP------------PDCL  240 (272)
T ss_pred             HHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH---cCCCCC-----CC------------CCCC
Confidence            456666778999999999999999999 777875321  111111111   110000     00            0233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.++...|+.+
T Consensus       241 ~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         241 DGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            4678999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.47  E-value=1.2e-13  Score=91.46  Aligned_cols=87  Identities=23%  Similarity=0.311  Sum_probs=60.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++++++ |..|+....  .......+...+.   .    +. ..            ...
T Consensus       173 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~~---~----~~-~~------------~~~  230 (261)
T cd05072         173 PEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMS--NSDVMSALQRGYR---M----PR-ME------------NCP  230 (261)
T ss_pred             HHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCC--HHHHHHHHHcCCC---C----CC-CC------------CCC
Confidence            677777788899999999999999998 888875321  1111111111000   0    00 00            233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++.+||..+|.+||++.++...|+.
T Consensus       231 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  260 (261)
T cd05072         231 DELYDIMKTCWKEKAEERPTFDYLQSVLDD  260 (261)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            567889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.46  E-value=3.8e-14  Score=93.68  Aligned_cols=88  Identities=26%  Similarity=0.338  Sum_probs=61.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||....+.++.++||||||++++++++ |+.|+....  .......+.....        ....            ..+.
T Consensus       173 PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~--------~~~~------------~~~~  230 (261)
T cd05148         173 PEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYDQITAGYR--------MPCP------------AKCP  230 (261)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHHHHHhCCc--------CCCC------------CCCC
Confidence            566667788899999999999999998 888875322  1111111111000        0000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||..+|.+||++.++...|+.+
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         231 QEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            5678999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.46  E-value=9.9e-14  Score=90.15  Aligned_cols=86  Identities=12%  Similarity=0.220  Sum_probs=62.6

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      +..++.++|||||||++|+|+.|..||+........           -...+..+.+.-....        ..++.+.++
T Consensus       215 ~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgS-----------laLAv~n~q~s~P~~~--------~yse~l~~l  275 (302)
T KOG2345|consen  215 HCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGS-----------LALAVQNAQISIPNSS--------RYSEALHQL  275 (302)
T ss_pred             CcccccccchhhhhHHHHHHHHcCCcchHHhhcCCe-----------EEEeeeccccccCCCC--------CccHHHHHH
Confidence            446789999999999999999999999854322111           1122223333322211        467889999


Q ss_pred             hhhccCCCccCCCCHHHHHHHHHHh
Q 042057           86 GVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      +..|++.+|.+||++.+++..+..+
T Consensus       276 ik~mlqvdP~qRP~i~~ll~~~d~L  300 (302)
T KOG2345|consen  276 IKSMLQVDPNQRPTIPELLSKLDDL  300 (302)
T ss_pred             HHHHhcCCcccCCCHHHHHHHHHhh
Confidence            9999999999999999999887754

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.46  E-value=7.2e-14  Score=103.13  Aligned_cols=89  Identities=19%  Similarity=0.296  Sum_probs=66.4

Q ss_pred             CcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            2 EYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         2 E~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      |.++...|++++|||||||.+||++| |..|++....++              +.+.+...        .+...|+-+..
T Consensus       870 e~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e--------------I~dlle~g--------eRLsqPpiCti  927 (1177)
T KOG1025|consen  870 ESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE--------------IPDLLEKG--------ERLSQPPICTI  927 (1177)
T ss_pred             HHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH--------------hhHHHhcc--------ccCCCCCCccH
Confidence            45677889999999999999999999 999987533111              11111111        11223447888


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      +++.+++.||..++..||+|+++...+.+...
T Consensus       928 DVy~~mvkCwmid~~~rp~fkel~~~fs~~ar  959 (1177)
T KOG1025|consen  928 DVYMVMVKCWMIDADSRPTFKELAEEFSRMAR  959 (1177)
T ss_pred             HHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence            99999999999999999999999988876643

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.45  E-value=6.1e-14  Score=93.72  Aligned_cols=91  Identities=22%  Similarity=0.283  Sum_probs=62.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||...++.++.++||||||+++||+++ |..|+....  ...+..++....  ..          ..        +....
T Consensus       180 PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~--~~----------~~--------~~~~~  237 (279)
T cd05109         180 LESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP--AREIPDLLEKGE--RL----------PQ--------PPICT  237 (279)
T ss_pred             HHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHCCC--cC----------CC--------CccCC
Confidence            566777788999999999999999998 888875321  111112211100  00          00        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||..+|..||++.+++..|+.+...
T Consensus       238 ~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05109         238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD  271 (279)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence            5678899999999999999999999988776544

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.45  E-value=1.7e-13  Score=90.99  Aligned_cols=87  Identities=15%  Similarity=0.170  Sum_probs=59.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|+||||+++|++++|+.|+....     .................     .           .....
T Consensus       182 Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~-----~-----------~~~~~  240 (269)
T cd08528         182 PEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTN-----MLSLATKIVEAVYEPLP-----E-----------GMYSE  240 (269)
T ss_pred             hhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccC-----HHHHHHHHhhccCCcCC-----c-----------ccCCH
Confidence            677777888999999999999999999999975321     11111111111110000     0           02234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      .+.+++.+||+.+|.+||++.++..++.
T Consensus       241 ~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         241 DVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            6788999999999999999999998774

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.45  E-value=6e-14  Score=92.39  Aligned_cols=86  Identities=23%  Similarity=0.238  Sum_probs=59.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++|+++ |..|+.....  ......+.   ..         .....        +....
T Consensus       165 PE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~--~~~~~~~~---~~---------~~~~~--------~~~~~  222 (252)
T cd05084         165 PEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN--QQTREAIE---QG---------VRLPC--------PELCP  222 (252)
T ss_pred             chhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH--HHHHHHHH---cC---------CCCCC--------cccCC
Confidence            677778888999999999999999998 8888753211  11111111   00         00000        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||..+|.+||++.++...|.
T Consensus       223 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  251 (252)
T cd05084         223 DAVYRLMERCWEYDPGQRPSFSTVHQELQ  251 (252)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence            56788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.45  E-value=7.6e-14  Score=94.51  Aligned_cols=93  Identities=24%  Similarity=0.267  Sum_probs=63.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++||||||++++|+++ |..|+.....     .+........     .  ..  ..+        ....
T Consensus       192 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~-----~--~~--~~~--------~~~~  249 (303)
T cd05088         192 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQG-----Y--RL--EKP--------LNCD  249 (303)
T ss_pred             HHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-----HHHHHHHhcC-----C--cC--CCC--------CCCC
Confidence            566666778899999999999999998 8888753211     1111111000     0  00  000        0223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++.+||+.+|.+||++.+++..|+.+.....
T Consensus       250 ~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~  285 (303)
T cd05088         250 DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK  285 (303)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence            467889999999999999999999999988766644

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.45  E-value=1.1e-13  Score=93.27  Aligned_cols=93  Identities=19%  Similarity=0.280  Sum_probs=58.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc--CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET--TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||+...+.++.++||||||+++||+++  +..|+....  ...........+.........+     .        +..+
T Consensus       201 pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~  265 (296)
T cd05095         201 WESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS--DEQVIENTGEFFRDQGRQVYLP-----K--------PALC  265 (296)
T ss_pred             HHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC--hHHHHHHHHHHHhhccccccCC-----C--------CCCC
Confidence            455566778999999999999999998  566764321  1111111111111100000000     0        0133


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ...+.+++..||+.+|.+||++.+|...|+
T Consensus       266 ~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  295 (296)
T cd05095         266 PDSLYKLMLSCWRRNAKERPSFQEIHATLL  295 (296)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence            467889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=99.45  E-value=1.7e-13  Score=92.92  Aligned_cols=88  Identities=17%  Similarity=0.197  Sum_probs=63.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHH-HHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL-ACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~   79 (127)
                      ||-+.++.|+.++||||||+.++|+.+|+.|+...........+.+            +..+.+..|.     .|. .++
T Consensus       246 PERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll------------~~Iv~~ppP~-----lP~~~fS  308 (364)
T KOG0581|consen  246 PERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELL------------CAIVDEPPPR-----LPEGEFS  308 (364)
T ss_pred             hhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHH------------HHHhcCCCCC-----CCcccCC
Confidence            7888999999999999999999999999999874322222222222            2211111111     111 367


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +++..++-.|++.+|.+||+..+++.
T Consensus       309 ~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  309 PEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            78999999999999999999999874

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.45  E-value=8.5e-14  Score=95.88  Aligned_cols=92  Identities=17%  Similarity=0.213  Sum_probs=62.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||+++|++++ |..|+....... .+...+   ..+...     ....            ...
T Consensus       250 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~~~---~~~~~~-----~~~~------------~~~  308 (343)
T cd05103         250 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRL---KEGTRM-----RAPD------------YTT  308 (343)
T ss_pred             cHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccH-HHHHHH---hccCCC-----CCCC------------CCC
Confidence            566677788999999999999999997 888875422110 011111   111000     0000            123


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+++.
T Consensus       309 ~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~  342 (343)
T cd05103         309 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA  342 (343)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            4678999999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.45  E-value=8.2e-14  Score=92.18  Aligned_cols=87  Identities=22%  Similarity=0.274  Sum_probs=60.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|+||||++++++++ |..|+....  .........   ...     ....            +....
T Consensus       172 PE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~---~~~-----~~~~------------~~~~~  229 (260)
T cd05070         172 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN--NREVLEQVE---RGY-----RMPC------------PQDCP  229 (260)
T ss_pred             hHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH---cCC-----CCCC------------CCcCC
Confidence            666677788999999999999999999 888875321  111111111   100     0000            11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++.+||..+|.+|||+.++...|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         230 ISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            568899999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.45  E-value=7.3e-14  Score=93.52  Aligned_cols=86  Identities=19%  Similarity=0.320  Sum_probs=59.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||++++|+++ |..|+....  .......+.   .....         ..+        ..+.
T Consensus       195 PE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~~~~~---~~~~~---------~~~--------~~~~  252 (283)
T cd05090         195 PEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVIEMVR---KRQLL---------PCS--------EDCP  252 (283)
T ss_pred             hHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH---cCCcC---------CCC--------CCCC
Confidence            677777788999999999999999998 888875321  111111111   11000         000        1234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++..||+.+|.+||++.++...|.
T Consensus       253 ~~~~~li~~cl~~~p~~Rp~~~~i~~~l~  281 (283)
T cd05090         253 PRMYSLMTECWQEGPSRRPRFKDIHTRLR  281 (283)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence            56788999999999999999999988775

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.44  E-value=7.3e-14  Score=92.41  Aligned_cols=87  Identities=21%  Similarity=0.212  Sum_probs=60.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++|+++ |+.|+....  .........   ...     .....            ....
T Consensus       172 pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~---~~~-----~~~~~------------~~~~  229 (260)
T cd05067         172 PEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNLE---RGY-----RMPRP------------DNCP  229 (260)
T ss_pred             HHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHHH---cCC-----CCCCC------------CCCC
Confidence            566667778899999999999999998 999986322  111111110   000     00000            0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++.+||..+|.+||++.++...|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  259 (260)
T cd05067         230 EELYELMRLCWKEKPEERPTFEYLRSVLED  259 (260)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence            568899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.44  E-value=1.5e-13  Score=92.24  Aligned_cols=86  Identities=21%  Similarity=0.246  Sum_probs=59.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||+++|+++ |..|+....     ..........+....         .        +....
T Consensus       201 PE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~-----~~~~~~~~~~~~~~~---------~--------~~~~~  258 (288)
T cd05050         201 PESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMA-----HEEVIYYVRDGNVLS---------C--------PDNCP  258 (288)
T ss_pred             HHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhcCCCCC---------C--------CCCCC
Confidence            566667788999999999999999997 777764321     111221111111100         0        01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.++...|+
T Consensus       259 ~~l~~li~~~l~~~p~~Rpt~~el~~~l~  287 (288)
T cd05050         259 LELYNLMRLCWSKLPSDRPSFASINRILQ  287 (288)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence            56788999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.44  E-value=3.1e-13  Score=91.94  Aligned_cols=92  Identities=22%  Similarity=0.284  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||+++|++++ |..|+....  ...+.....   .....     ...            ..+.
T Consensus       205 PE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~--~~~~~~~~~---~~~~~-----~~~------------~~~~  262 (314)
T cd05099         205 PEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIP--VEELFKLLR---EGHRM-----DKP------------SNCT  262 (314)
T ss_pred             HHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC-----CCC------------CCCC
Confidence            566677788999999999999999998 788875321  111111111   11000     000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++.+||..+|.+||++.+++..|.++....
T Consensus       263 ~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~  297 (314)
T cd05099         263 HELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV  297 (314)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence            56778999999999999999999999999887654

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.44  E-value=5e-14  Score=93.17  Aligned_cols=86  Identities=17%  Similarity=0.219  Sum_probs=57.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+..++.++.++||||||+++|++++ |..|+.....  ..+...+   ......     ...            ....
T Consensus       170 pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~---~~~~~~-----~~~------------~~~~  227 (256)
T cd05113         170 PEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETVEKV---SQGLRL-----YRP------------HLAS  227 (256)
T ss_pred             HHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHH---hcCCCC-----CCC------------CCCC
Confidence            566666778899999999999999998 8888753221  1111111   111000     000            0223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.+++..|+
T Consensus       228 ~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         228 EKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            57789999999999999999999987663

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.44  E-value=4.1e-13  Score=88.89  Aligned_cols=83  Identities=20%  Similarity=0.189  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.++...|+.+|||||+||+++||+.-..||...     .+.++..+.-.+....+.                ....+.
T Consensus       197 PE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~KI~qgd~~~~p----------------~~~YS~  255 (375)
T KOG0591|consen  197 PERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKKIEQGDYPPLP----------------DEHYST  255 (375)
T ss_pred             HHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHHHHcCCCCCCc----------------HHHhhh
Confidence            78889999999999999999999999999998632     344444433332111111                125677


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .+..++..|+..+|+.||+.-.++
T Consensus       256 ~l~~li~~ci~vd~~~RP~t~~~v  279 (375)
T KOG0591|consen  256 DLRELINMCIAVDPEQRPDTVPYV  279 (375)
T ss_pred             HHHHHHHHHccCCcccCCCcchHH
Confidence            889999999999999999843333

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.44  E-value=7.9e-14  Score=98.66  Aligned_cols=94  Identities=17%  Similarity=0.220  Sum_probs=68.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHH-HhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFA-RMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..+.||.++|||||||++||+.+ |..||....  ...+..++ ...+.          +..          +...
T Consensus       331 PEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~--~~~v~~kI~~~~~r----------~~~----------~~~~  388 (474)
T KOG0194|consen  331 PETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMK--NYEVKAKIVKNGYR----------MPI----------PSKT  388 (474)
T ss_pred             hhhhccCccccccchhheeeeEEeeeccCCCCCCCCC--HHHHHHHHHhcCcc----------CCC----------CCCC
Confidence            899999999999999999999999999 888986422  11111111 11111          100          1133


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      +..+..++..||..+|.+||+|.++...|+.+......
T Consensus       389 p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~~  426 (474)
T KOG0194|consen  389 PKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKEA  426 (474)
T ss_pred             HHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhcccc
Confidence            45677888899999999999999999999998877653

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.44  E-value=8.8e-14  Score=97.79  Aligned_cols=90  Identities=20%  Similarity=0.176  Sum_probs=61.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++|+++ |..|+....... .+...+   ..+.     ..    ..+        ....
T Consensus       310 PE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~-~~~~~~---~~~~-----~~----~~p--------~~~~  368 (401)
T cd05107         310 PESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNE-QFYNAI---KRGY-----RM----AKP--------AHAS  368 (401)
T ss_pred             hHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchH-HHHHHH---HcCC-----CC----CCC--------CCCC
Confidence            566667778999999999999999998 888875321110 011111   1110     00    000        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++..||..+|.+||++.+++..|+.+.
T Consensus       369 ~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         369 DEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            57889999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.43  E-value=2.1e-13  Score=91.05  Aligned_cols=86  Identities=20%  Similarity=0.334  Sum_probs=59.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||++++|+++ |..|+....  .......+   .......     ..            ....
T Consensus       190 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~--~~~~~~~~---~~~~~~~-----~~------------~~~~  247 (277)
T cd05062         190 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS--NEQVLRFV---MEGGLLD-----KP------------DNCP  247 (277)
T ss_pred             hhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHH---HcCCcCC-----CC------------CCCC
Confidence            677777889999999999999999999 677765321  11111111   1111000     00            0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.+++..|+
T Consensus       248 ~~~~~li~~~l~~~p~~Rps~~e~l~~l~  276 (277)
T cd05062         248 DMLFELMRMCWQYNPKMRPSFLEIISSIK  276 (277)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence            56789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.43  E-value=3.4e-13  Score=89.24  Aligned_cols=89  Identities=17%  Similarity=0.273  Sum_probs=60.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||++++++++|..|+.............+.......     .+.+...           ....
T Consensus       168 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----------~~~~  231 (265)
T cd06605         168 PERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEP-----PPRLPSG-----------KFSP  231 (265)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCC-----CCCCChh-----------hcCH
Confidence            67777788999999999999999999999998644322222222222211110     0111100           1445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       232 ~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         232 DFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHHHHHcCCCchhCcCHHHHhh
Confidence            6789999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.43  E-value=2.1e-13  Score=91.73  Aligned_cols=93  Identities=23%  Similarity=0.284  Sum_probs=59.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc--CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET--TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..+.++.++||||||++++|+++  +..|+....  ...........+.........+     .        +...
T Consensus       201 PE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~--------~~~~  265 (296)
T cd05051         201 WESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT--DQQVIENAGHFFRDDGRQIYLP-----R--------PPNC  265 (296)
T ss_pred             HHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--hHHHHHHHHhccccccccccCC-----C--------ccCC
Confidence            577777789999999999999999998  556664321  1112222221111100000000     0        0123


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      +..+.+++.+||+.+|.+||++.++...|+
T Consensus       266 ~~~l~~li~~cl~~~p~~Rpt~~el~~~L~  295 (296)
T cd05051         266 PKDIYELMLECWRRDEEDRPTFREIHLFLQ  295 (296)
T ss_pred             CHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence            457899999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.43  E-value=9.3e-14  Score=94.05  Aligned_cols=91  Identities=20%  Similarity=0.263  Sum_probs=62.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++||||||+++||+++ |..|+....  ......++.   ...       ....          +..+.
T Consensus       180 PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~---~~~-------~~~~----------~~~~~  237 (303)
T cd05110         180 LECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLE---KGE-------RLPQ----------PPICT  237 (303)
T ss_pred             HHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---CCC-------CCCC----------CCCCC
Confidence            566667788999999999999999987 888875321  111112211   100       0000          00233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||..+|.+||++.+++..|..+...
T Consensus       238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~  271 (303)
T cd05110         238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD  271 (303)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            4678899999999999999999999999887544

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.43  E-value=5.9e-14  Score=93.94  Aligned_cols=99  Identities=17%  Similarity=0.222  Sum_probs=60.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-----ccccccccccccCCCCcchhhhH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-----HVVYIVDPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~   75 (127)
                      ||++.++.++.++||||||++++|++++..+.....   ..+..........     .....+.......        .+
T Consensus       180 PE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  248 (284)
T cd05081         180 PESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPP---AEFMRMMGNDKQGQMIVYHLIELLKNNGRLP--------AP  248 (284)
T ss_pred             HHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcc---hhhhhhcccccccccchHHHHHHHhcCCcCC--------CC
Confidence            567777788999999999999999999876543211   0000000000000     0000000000000        01


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ......+.+++.+||+.+|.+|||+.+++..|+.+
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~  283 (284)
T cd05081         249 PGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI  283 (284)
T ss_pred             CCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence            13345788999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.43  E-value=3.6e-13  Score=88.87  Aligned_cols=88  Identities=19%  Similarity=0.222  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++|+++ |..|+....  ...+...+...+.        ...            +...+
T Consensus       168 pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~~--------~~~------------~~~~~  225 (256)
T cd05039         168 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPHVEKGYR--------MEA------------PEGCP  225 (256)
T ss_pred             chhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhcCCC--------CCC------------ccCCC
Confidence            677778889999999999999999997 888875321  1111111111000        000            01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||..+|.+||++.+++..|+++
T Consensus       226 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         226 PEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            5678899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.43  E-value=1.2e-13  Score=91.79  Aligned_cols=88  Identities=18%  Similarity=0.278  Sum_probs=60.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||++++|+++ |..|+....  ......++....          ....          +..++
T Consensus       180 PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~--~~~~~~~i~~~~----------~~~~----------~~~~~  237 (269)
T cd05065         180 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS--NQDVINAIEQDY----------RLPP----------PMDCP  237 (269)
T ss_pred             HhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCC--HHHHHHHHHcCC----------cCCC----------cccCC
Confidence            677777788999999999999999886 888875321  111112211000          0000          01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+..++..||+.+|.+||++.++...|+.+
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         238 TALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5678899999999999999999999888764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.43  E-value=8.9e-14  Score=91.73  Aligned_cols=87  Identities=21%  Similarity=0.240  Sum_probs=59.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++||||||++++||++ |..|+......  ........  ..       ....          .+...+
T Consensus       169 pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~--~~-------~~~~----------~~~~~~  227 (257)
T cd05040         169 PESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDK--EG-------ERLE----------RPEACP  227 (257)
T ss_pred             HHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHh--cC-------CcCC----------CCccCC
Confidence            567777788999999999999999998 99997532211  11111110  00       0000          001234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.+++..|.
T Consensus       228 ~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         228 QDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             HHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            56788999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.43  E-value=1.1e-13  Score=91.03  Aligned_cols=86  Identities=22%  Similarity=0.249  Sum_probs=59.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++||||||++++++++ |..|+.....  ......+.   ...       ..  ..+        ....
T Consensus       163 PE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--~~~~~~~~---~~~-------~~--~~~--------~~~~  220 (250)
T cd05085         163 PEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--QQAREQVE---KGY-------RM--SCP--------QKCP  220 (250)
T ss_pred             HHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHH---cCC-------CC--CCC--------CCCC
Confidence            677777888999999999999999998 8888753211  11111111   110       00  000        0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||+.+|.+||++.++...|.
T Consensus       221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         221 DDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            57889999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.43  E-value=4e-13  Score=88.47  Aligned_cols=83  Identities=16%  Similarity=0.205  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||+...+.++.++|+||||++++++++|+.|+....  .   .........+..     +.+            +.....
T Consensus       170 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~---~~~~~~~~~~~~-----~~~------------~~~~~~  227 (256)
T cd08529         170 PELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--Q---GALILKIIRGVF-----PPV------------SQMYSQ  227 (256)
T ss_pred             HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--H---HHHHHHHHcCCC-----CCC------------ccccCH
Confidence            677777788999999999999999999999985322  1   111111111100     001            113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||++.+++.
T Consensus       228 ~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         228 QLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHhh
Confidence            6789999999999999999998875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.43  E-value=3.8e-13  Score=89.83  Aligned_cols=83  Identities=18%  Similarity=0.247  Sum_probs=57.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||++++|+++|+.|+.......  ....    ....    ..+.+.            .....
T Consensus       170 PE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~----~~~~----~~~~~~------------~~~~~  227 (277)
T cd06642         170 PEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFL----IPKN----SPPTLE------------GQYSK  227 (277)
T ss_pred             HHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhh----hhcC----CCCCCC------------cccCH
Confidence            577777788999999999999999999999975322110  0000    0000    011111            13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||++.+++.
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         228 PFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHccCCcccCcCHHHHHH
Confidence            6789999999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.43  E-value=1e-13  Score=91.61  Aligned_cols=85  Identities=21%  Similarity=0.247  Sum_probs=58.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|+||||+++|++++ |+.|+.....  ......+....        ....            +...+
T Consensus       170 Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~--------~~~~------------~~~~~  227 (256)
T cd05059         170 PEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVVESVSAGY--------RLYR------------PKLAP  227 (256)
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHHHHHHcCC--------cCCC------------CCCCC
Confidence            566677788999999999999999998 7888753211  11111111000        0000            11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ..+.+++.+||..+|.+||++.+++..|
T Consensus       228 ~~~~~li~~cl~~~p~~Rpt~~~~l~~l  255 (256)
T cd05059         228 TEVYTIMYSCWHEKPEDRPAFKKLLSQL  255 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence            5788999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.42  E-value=2.4e-13  Score=90.60  Aligned_cols=86  Identities=22%  Similarity=0.352  Sum_probs=59.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++|+++ |..|+....  ...+.....   ......     .    +        ....
T Consensus       190 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~---~~~~~~-----~----~--------~~~~  247 (277)
T cd05032         190 PESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--NEEVLKFVI---DGGHLD-----L----P--------ENCP  247 (277)
T ss_pred             HHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--HHHHHHHHh---cCCCCC-----C----C--------CCCC
Confidence            566777788999999999999999998 888875321  111222111   110000     0    0        1234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++..||+.+|.+|||+.+++..|+
T Consensus       248 ~~~~~li~~~l~~~p~~Rpt~~~l~~~l~  276 (277)
T cd05032         248 DKLLELMRMCWQYNPKMRPTFLEIVSSLK  276 (277)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence            57789999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.42  E-value=2.4e-13  Score=91.60  Aligned_cols=93  Identities=20%  Similarity=0.268  Sum_probs=58.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc--CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET--TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..+.++.++||||||++++++++  +..|+....  ...........+........     ...+        ...
T Consensus       200 PE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~~--------~~~  264 (295)
T cd05097         200 WESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLS--DEQVIENTGEFFRNQGRQIY-----LSQT--------PLC  264 (295)
T ss_pred             hhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccC--hHHHHHHHHHhhhhcccccc-----CCCC--------CCC
Confidence            677777889999999999999999988  455654321  11111111111111000000     0000        023


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      +..+.+++.+||+.+|.+||++.+|+..|.
T Consensus       265 ~~~l~~li~~~l~~~p~~RPs~~~i~~~l~  294 (295)
T cd05097         265 PSPVFKLMMRCWSRDIKDRPTFNKIHHFLR  294 (295)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence            357899999999999999999999988875

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.42  E-value=5.1e-13  Score=91.58  Aligned_cols=92  Identities=21%  Similarity=0.318  Sum_probs=64.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||||++++|+++ |..|+...     ....+...........     .    +        ....
T Consensus       205 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~~-----~----~--------~~~~  262 (334)
T cd05100         205 PEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-----PVEELFKLLKEGHRMD-----K----P--------ANCT  262 (334)
T ss_pred             HHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCCC-----C----C--------CCCC
Confidence            567777788999999999999999998 77776532     1222222111111000     0    0        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++.+||+.+|.+||++.+++..|..+....
T Consensus       263 ~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~  297 (334)
T cd05100         263 HELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT  297 (334)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence            56789999999999999999999999999887543

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.42  E-value=7.8e-13  Score=88.81  Aligned_cols=94  Identities=18%  Similarity=0.126  Sum_probs=59.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||+|+++|++++|+.|+...........+............. .......          .....
T Consensus       172 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----------~~~~~  240 (287)
T cd06621         172 PERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPEL-KDEPGNG----------IKWSE  240 (287)
T ss_pred             HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhh-ccCCCCC----------CchHH
Confidence            566777788999999999999999999999986442111111111111111111111 0000000          02345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       241 ~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         241 EFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHh
Confidence            6889999999999999999999886

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.42  E-value=2.3e-13  Score=90.34  Aligned_cols=88  Identities=22%  Similarity=0.274  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+...+.++.++||||||++++|+++ |..|+.....  ...   ........     ....            +....
T Consensus       172 PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~--~~~---~~~~~~~~-----~~~~------------~~~~~  229 (262)
T cd05071         172 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REV---LDQVERGY-----RMPC------------PPECP  229 (262)
T ss_pred             HhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh--HHH---HHHHhcCC-----CCCC------------ccccC
Confidence            677777788999999999999999999 7778753211  111   11100000     0000            11345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.++...|+..
T Consensus       230 ~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~  260 (262)
T cd05071         230 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDY  260 (262)
T ss_pred             HHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence            6778999999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.42  E-value=3.8e-13  Score=89.45  Aligned_cols=88  Identities=15%  Similarity=0.275  Sum_probs=60.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||+++||+++ |+.|+....  ...+..+..   .....     ...            ....
T Consensus       184 pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~--~~~~~~~~~---~~~~~-----~~~------------~~~~  241 (273)
T cd05074         184 LESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVE--NSEIYNYLI---KGNRL-----KQP------------PDCL  241 (273)
T ss_pred             HhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCC--HHHHHHHHH---cCCcC-----CCC------------CCCC
Confidence            455666778889999999999999998 778865321  111111111   11000     000            0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.++...|+.+
T Consensus       242 ~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~  272 (273)
T cd05074         242 EDVYELMCQCWSPEPKCRPSFQHLRDQLELI  272 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            5788999999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.41  E-value=8e-13  Score=87.89  Aligned_cols=91  Identities=14%  Similarity=0.169  Sum_probs=63.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||||++++|+++ |..||.....  ........   .....     ...            ..++
T Consensus       177 PE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~---~~~~~-----~~~------------~~~~  234 (270)
T cd05056         177 PESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN--NDVIGRIE---NGERL-----PMP------------PNCP  234 (270)
T ss_pred             hhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHH---cCCcC-----CCC------------CCCC
Confidence            677777788999999999999999986 9989754321  11111111   11000     000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++.+|+..+|.+||++.+++..|..+...
T Consensus       235 ~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~  268 (270)
T cd05056         235 PTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE  268 (270)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            5678899999999999999999999999987653

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.41  E-value=8.9e-14  Score=93.21  Aligned_cols=93  Identities=18%  Similarity=0.301  Sum_probs=60.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCcccc----------CCCcHHHHHHhhcCCccccccccccccCCCCcc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFE----------GDLNLHRFARMALPDHVVYIVDPILLNDGKGET   70 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   70 (127)
                      ||++.++.++.++||||||++++|+++++.|......          .......++.......         ....    
T Consensus       181 pE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~----  247 (284)
T cd05079         181 PECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGK---------RLPR----  247 (284)
T ss_pred             HHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCc---------cCCC----
Confidence            5666777889999999999999999997765321100          0001111111000000         0000    


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                          +...+..+.+++.+||+.+|.+||++.+++..|+.+
T Consensus       248 ----~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~  283 (284)
T cd05079         248 ----PPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI  283 (284)
T ss_pred             ----CCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence                113456789999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.41  E-value=2.1e-13  Score=89.65  Aligned_cols=86  Identities=23%  Similarity=0.314  Sum_probs=59.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++|+||||++++|+++ |..|+.....  ......+....          ..  ..        +...+
T Consensus       164 PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~~~~~~~----------~~--~~--------~~~~~  221 (251)
T cd05041         164 PEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRERIESGY----------RM--PA--------PQLCP  221 (251)
T ss_pred             hHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHHHHhcCC----------CC--CC--------CccCC
Confidence            677777888999999999999999998 7777753211  11111111000          00  00        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++.+||..+|.+||++.+++..|.
T Consensus       222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            57889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.41  E-value=4.5e-13  Score=88.34  Aligned_cols=85  Identities=24%  Similarity=0.298  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||+++||+++ |..|+....     ..........+.  ....+.               ...
T Consensus       170 Pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~--~~~~~~---------------~~~  227 (256)
T cd05112         170 PEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS-----NSEVVETINAGF--RLYKPR---------------LAS  227 (256)
T ss_pred             HhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHhCCC--CCCCCC---------------CCC
Confidence            566777888999999999999999998 888875321     111111111110  000111               123


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ..+.+++..||+.+|.+||++.+++..|
T Consensus       228 ~~~~~l~~~~l~~~p~~Rp~~~~~l~~l  255 (256)
T cd05112         228 QSVYELMQHCWKERPEDRPSFSLLLHQL  255 (256)
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence            5688999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.41  E-value=3.7e-13  Score=89.94  Aligned_cols=84  Identities=18%  Similarity=0.200  Sum_probs=58.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|+||||++++|+++|..|+......     .........     ..+.            .+.....
T Consensus       170 pE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-----~~~~~~~~~-----~~~~------------~~~~~~~  227 (277)
T cd06640         170 PEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM-----RVLFLIPKN-----NPPT------------LTGEFSK  227 (277)
T ss_pred             HhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-----hHhhhhhcC-----CCCC------------CchhhhH
Confidence            67777778899999999999999999999997532110     000000000     0011            1124556


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+.+++.+||+.+|.+||++.+++..
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         228 PFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHcccCcccCcCHHHHHhC
Confidence            78899999999999999999998744

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.41  E-value=2.3e-13  Score=90.10  Aligned_cols=87  Identities=22%  Similarity=0.282  Sum_probs=60.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|+||||++++++++ |..|+....  ...+.....   .+.       ...  .        +....
T Consensus       172 PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~---~~~-------~~~--~--------~~~~~  229 (260)
T cd05073         172 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALE---RGY-------RMP--R--------PENCP  229 (260)
T ss_pred             HhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHh---CCC-------CCC--C--------cccCC
Confidence            677777788999999999999999998 888875321  111111111   000       000  0        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++.+||+.+|.+||++.++...|+.
T Consensus       230 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~  259 (260)
T cd05073         230 EELYNIMMRCWKNRPEERPTFEYIQSVLDD  259 (260)
T ss_pred             HHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            567899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.41  E-value=1.9e-13  Score=92.31  Aligned_cols=92  Identities=14%  Similarity=0.117  Sum_probs=59.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||...+..++.++|||||||+++|+++|+.||....... .+.......+..   .+....+.           ...+..
T Consensus       202 pe~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~-----------~~~~~~  266 (294)
T PHA02882        202 LDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-NLIHAAKCDFIK---RLHEGKIK-----------IKNANK  266 (294)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch-HHHHHhHHHHHH---Hhhhhhhc-----------cCCCCH
Confidence            455566678999999999999999999999997542211 111111100000   00001000           013346


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      .+.+++..||..+|.+||++.++.+.|
T Consensus       267 ~~~~~~~~~~~~~~~~rp~~~~l~~~~  293 (294)
T PHA02882        267 FIYDFIECVTKLSYEEKPDYDALIKIF  293 (294)
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence            788999999999999999999998765

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=3.3e-13  Score=93.37  Aligned_cols=83  Identities=18%  Similarity=0.235  Sum_probs=60.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....|+.++||||+||+.+||.+|..|+.+...              -...-++...-....        ..+...
T Consensus       180 PEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP--------------mrvlflIpk~~PP~L--------~~~~S~  237 (467)
T KOG0201|consen  180 PEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP--------------MRVLFLIPKSAPPRL--------DGDFSP  237 (467)
T ss_pred             hhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc--------------ceEEEeccCCCCCcc--------ccccCH
Confidence            8999988999999999999999999999999764211              111111111111111        115667


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..|+..+|..||++.+++.
T Consensus       238 ~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  238 PFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             HHHHHHHHHhhcCcccCcCHHHHhh
Confidence            7889999999999999999999874

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.40  E-value=2.4e-13  Score=90.31  Aligned_cols=83  Identities=17%  Similarity=0.250  Sum_probs=55.2

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++. .+.++.++||||||+++||+++ |..|+....     .....+ ..... .     ....            ..
T Consensus       177 PE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~~~-~~~~~-~-----~~~~------------~~  232 (262)
T cd05077         177 PECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKT-----LAEKER-FYEGQ-C-----MLVT------------PS  232 (262)
T ss_pred             hhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcc-----hhHHHH-HHhcC-c-----cCCC------------CC
Confidence            67665 4568899999999999999974 777764321     111100 00100 0     0000            22


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ...+..++.+||+.+|.+||++.+++..|
T Consensus       233 ~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         233 CKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            34678999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.40  E-value=2.8e-13  Score=90.56  Aligned_cols=91  Identities=19%  Similarity=0.272  Sum_probs=63.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|+||||++++|+++ |+.|+.....  ..+...+.   ....         ...        +..+.
T Consensus       180 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~---~~~~---------~~~--------~~~~~  237 (279)
T cd05057         180 LESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLE---KGER---------LPQ--------PPICT  237 (279)
T ss_pred             HHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHh---CCCC---------CCC--------CCCCC
Confidence            566666788999999999999999998 9999864321  11111111   1100         000        00233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||..+|.+||++.+++..|..+...
T Consensus       238 ~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~  271 (279)
T cd05057         238 IDVYMVLVKCWMIDAESRPTFKELINEFSKMARD  271 (279)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence            4678899999999999999999999999987654

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.40  E-value=1.9e-13  Score=89.96  Aligned_cols=85  Identities=19%  Similarity=0.220  Sum_probs=56.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||++++++++|+.|+........     ......     ...+...          .+.....
T Consensus       168 PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-----~~~~~~-----~~~~~~~----------~~~~~~~  227 (256)
T cd06612         168 PEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-----IFMIPN-----KPPPTLS----------DPEKWSP  227 (256)
T ss_pred             HHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-----hhhhcc-----CCCCCCC----------chhhcCH
Confidence            5666777888999999999999999999999763221100     000000     0000000          1113445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||++.+++.
T Consensus       228 ~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         228 EFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHhcChhhCcCHHHHhc
Confidence            7889999999999999999998874

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.40  E-value=7.7e-13  Score=87.09  Aligned_cols=83  Identities=12%  Similarity=0.193  Sum_probs=57.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++||||||+++|++++|..|+....     ....+..........     +.            .....
T Consensus       170 PE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~------------~~~~~  227 (256)
T cd08220         170 PELCEGKPYNQKSDIWALGCVLYELASLKRAFEAAN-----LPALVLKIMSGTFAP-----IS------------DRYSP  227 (256)
T ss_pred             chhccCCCCCcccchHHHHHHHHHHHhCCCCcccCc-----hHHHHHHHHhcCCCC-----CC------------CCcCH
Confidence            677777778999999999999999999999975321     111111111111001     00            02345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       228 ~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         228 DLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            6789999999999999999999874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.40  E-value=6.5e-13  Score=87.60  Aligned_cols=87  Identities=21%  Similarity=0.266  Sum_probs=60.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|+||||++++++++ |+.|+....     ..........+...     ...            ...+
T Consensus       166 pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~-----~~~------------~~~~  223 (254)
T cd05083         166 PEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS-----LKEVKECVEKGYRM-----EPP------------EGCP  223 (254)
T ss_pred             HHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC-----HHHHHHHHhCCCCC-----CCC------------CcCC
Confidence            677777889999999999999999997 888875321     11111111111000     000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++..||+.+|..||++.+++..|+.
T Consensus       224 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         224 ADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            567899999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.40  E-value=2.6e-13  Score=89.82  Aligned_cols=87  Identities=22%  Similarity=0.295  Sum_probs=59.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||+..++.++.++|+||||++++|+++ |..|+....  ...........+        ....            +....
T Consensus       172 Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~--------~~~~------------~~~~~  229 (260)
T cd05069         172 PEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMV--NREVLEQVERGY--------RMPC------------PQGCP  229 (260)
T ss_pred             HHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC--------CCCC------------CcccC
Confidence            566667788999999999999999999 888875321  111111111000        0000            01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++.+||+.+|.+||++.++.+.|+.
T Consensus       230 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  259 (260)
T cd05069         230 ESLHELMKLCWKKDPDERPTFEYIQSFLED  259 (260)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence            567889999999999999999999988864

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.40  E-value=6.2e-13  Score=87.68  Aligned_cols=83  Identities=14%  Similarity=0.191  Sum_probs=57.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|+||||++++++++|+.|+...     ...+.+.....+....     .            +.....
T Consensus       170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~-----~~~~~~~~~~~~~~~~-----~------------~~~~~~  227 (256)
T cd08218         170 PEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-----NMKNLVLKIIRGSYPP-----V------------SSHYSY  227 (256)
T ss_pred             HHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCC-----CHHHHHHHHhcCCCCC-----C------------cccCCH
Confidence            56677778889999999999999999999997532     1122222111111100     0            113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||++.+|+.
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         228 DLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhh
Confidence            6789999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.39  E-value=6.2e-13  Score=89.12  Aligned_cols=90  Identities=19%  Similarity=0.259  Sum_probs=60.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCC------CcHHHHHHhhcCCccccccccccccCCCCcchhhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD------LNLHRFARMALPDHVVYIVDPILLNDGKGETRINS   74 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (127)
                      ||++.++.++.++|+||||++++++++|+.|+.......      ..+..+........     .+.+..          
T Consensus       171 PE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~----------  235 (284)
T cd06620         171 PERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP-----PPRLPS----------  235 (284)
T ss_pred             HHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc-----CCCCCc----------
Confidence            677777888999999999999999999999987543211      11112221111110     011100          


Q ss_pred             HHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           75 RLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        75 ~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                       ......+.+++..||..+|.+||++.+++..
T Consensus       236 -~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         236 -SDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             -hhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence             0244567889999999999999999998865

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.38  E-value=9.5e-13  Score=87.55  Aligned_cols=83  Identities=14%  Similarity=0.237  Sum_probs=52.4

Q ss_pred             CCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            8 GVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      .++.++|+||||+++||+++ |+.||.....  .......   ..+.......+.+..            .....+..++
T Consensus       185 ~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~------------~~~~~~~~l~  247 (269)
T cd05087         185 DQTKESNVWSLGVTIWELFELGSQPYRHLSD--EQVLTYT---VREQQLKLPKPRLKL------------PLSDRWYEVM  247 (269)
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCCCh--HHHHHHH---hhcccCCCCCCccCC------------CCChHHHHHH
Confidence            35789999999999999996 9989864321  1111111   111111112222211            2234567788


Q ss_pred             hhccCCCccCCCCHHHHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..|| .+|++||++.+|+..|+
T Consensus       248 ~~c~-~~P~~Rpt~~~l~~~l~  268 (269)
T cd05087         248 QFCW-LQPEQRPSAEEVHLLLS  268 (269)
T ss_pred             HHHh-cCcccCCCHHHHHHHhc
Confidence            9999 58999999999998764

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.38  E-value=6.7e-13  Score=95.63  Aligned_cols=83  Identities=24%  Similarity=0.261  Sum_probs=59.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|||||||++||+++|+.||...     .....+.....+....     +            +.....
T Consensus       214 PE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~-----~~~~~~~~~~~~~~~~-----~------------~~~~~~  271 (496)
T PTZ00283        214 PEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGE-----NMEEVMHKTLAGRYDP-----L------------PPSISP  271 (496)
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHhcCCCCC-----C------------CCCCCH
Confidence            67778888999999999999999999999998532     1222222222111100     0            113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       272 ~l~~li~~~L~~dP~~RPs~~ell~  296 (496)
T PTZ00283        272 EMQEIVTALLSSDPKRRPSSSKLLN  296 (496)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHHh
Confidence            7889999999999999999999875

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.38  E-value=2.5e-13  Score=89.86  Aligned_cols=83  Identities=18%  Similarity=0.204  Sum_probs=54.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCC-CCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTK-KPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++.+ +.++.++||||||+++||+++|. .|+....     ...... .....      ..+..            ..
T Consensus       173 PE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~-----~~~~~~-~~~~~------~~~~~------------~~  228 (258)
T cd05078         173 PECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALD-----SQKKLQ-FYEDR------HQLPA------------PK  228 (258)
T ss_pred             chhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhcc-----HHHHHH-HHHcc------ccCCC------------CC
Confidence            677765 35788999999999999999985 4443211     000000 00000      00110            22


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ...+.+++..||+.+|.+||++.+++..|
T Consensus       229 ~~~~~~li~~~l~~~p~~Rps~~~il~~l  257 (258)
T cd05078         229 WTELANLINQCMDYEPDFRPSFRAIIRDL  257 (258)
T ss_pred             cHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            34678999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.38  E-value=4.1e-13  Score=89.21  Aligned_cols=88  Identities=17%  Similarity=0.265  Sum_probs=60.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|+||||++++|+++ |..|+.....  ......+...+        .....            ...+
T Consensus       178 pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~~~~--------~~~~~------------~~~~  235 (267)
T cd05066         178 PEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIKAIEEGY--------RLPAP------------MDCP  235 (267)
T ss_pred             HhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHHHHhCCC--------cCCCC------------CCCC
Confidence            577777788999999999999999886 9988753221  11111111000        00000            0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++.+||+.+|.+||++.+++..|.++
T Consensus       236 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         236 AALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             HHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            5678999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=4.5e-13  Score=89.28  Aligned_cols=84  Identities=17%  Similarity=0.281  Sum_probs=57.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||+++|++++|+.|+.....  ......+.   ..     ..+.+...           ....
T Consensus       167 PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~---~~-----~~~~~~~~-----------~~~~  225 (274)
T cd06609         167 PEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--MRVLFLIP---KN-----NPPSLEGN-----------KFSK  225 (274)
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--HHHHHHhh---hc-----CCCCCccc-----------ccCH
Confidence            6777777899999999999999999999999864221  10110010   00     01111110           1344


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       226 ~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         226 PFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHHHHhhCChhhCcCHHHHhh
Confidence            6788999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.38  E-value=3.2e-13  Score=89.28  Aligned_cols=84  Identities=20%  Similarity=0.195  Sum_probs=57.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++||+++|+.|+....    ..............     +.+.            .....
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~~-----~~~~------------~~~~~  234 (263)
T cd06625         176 PEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFE----AMAAIFKIATQPTN-----PQLP------------SHVSP  234 (263)
T ss_pred             cceeccCCCCchhhhHHHHHHHHHHHhCCCCccccc----hHHHHHHHhccCCC-----CCCC------------ccCCH
Confidence            677777778999999999999999999999975321    11111111011000     0111            13344


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       235 ~~~~li~~~l~~~p~~Rpt~~~ll~  259 (263)
T cd06625         235 DARNFLRRTFVENAKKRPSAEELLR  259 (263)
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHhh
Confidence            6788999999999999999998875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.37  E-value=1.1e-12  Score=89.85  Aligned_cols=34  Identities=26%  Similarity=0.390  Sum_probs=30.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||+++|+++|+.|+..
T Consensus       171 PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~  204 (331)
T cd06649         171 PERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP  204 (331)
T ss_pred             HhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence            6788888899999999999999999999999853

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.37  E-value=2e-12  Score=86.09  Aligned_cols=83  Identities=18%  Similarity=0.233  Sum_probs=52.4

Q ss_pred             CCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            8 GVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      .++.++||||||+++||+++ +..|+....     ..........+......++.+..            .....+.+++
T Consensus       184 ~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l~  246 (268)
T cd05086         184 EQTKPSNVWALGVTLWELFENAAQPYSHLS-----DREVLNHVIKDQQVKLFKPQLEL------------PYSERWYEVL  246 (268)
T ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHhhcccccCCCccCC------------CCcHHHHHHH
Confidence            35778999999999999997 566764321     11222222222222233333322            2234567788


Q ss_pred             hhccCCCccCCCCHHHHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..|| .+|++||++.+|++.|.
T Consensus       247 ~~c~-~~P~~Rp~~~~i~~~l~  267 (268)
T cd05086         247 QFCW-LSPEKRATAEEVHRLLT  267 (268)
T ss_pred             HHHh-hCcccCCCHHHHHHHhc
Confidence            8999 57999999999988763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.36  E-value=5.4e-13  Score=87.99  Aligned_cols=84  Identities=15%  Similarity=0.117  Sum_probs=56.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++|+||||+++++|++|..||....     ..........+....     +.            .....
T Consensus       169 PE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~-----~~------------~~~~~  226 (255)
T cd08219         169 PEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANS-----WKNLILKVCQGSYKP-----LP------------SHYSY  226 (255)
T ss_pred             HHHHccCCcCchhhhhhhchhheehhhccCCCCCCC-----HHHHHHHHhcCCCCC-----CC------------cccCH
Confidence            566666778899999999999999999999986321     111111111111110     00            12334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+.+++.+||+.+|.+||++.+++..
T Consensus       227 ~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         227 ELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            57889999999999999999998754

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.36  E-value=1.4e-12  Score=86.71  Aligned_cols=78  Identities=15%  Similarity=0.231  Sum_probs=51.2

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++||||||+++||+++|+.|+.....    ..... ......     ......           ......+.+++
T Consensus       191 ~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~----~~~~~-~~~~~~-----~~~~~~-----------~~~~~~~~~li  249 (272)
T cd06637         191 ATYDFKSDLWSLGITAIEMAEGAPPLCDMHP----MRALF-LIPRNP-----APRLKS-----------KKWSKKFQSFI  249 (272)
T ss_pred             CCCCchhhHHHHHHHHHHHHhCCCCccccCH----HHHHH-HHhcCC-----CCCCCC-----------CCcCHHHHHHH
Confidence            4578899999999999999999999753211    11110 000000     000000           02334678999


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+||..+|.+||++.+++.
T Consensus       250 ~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         250 ESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             HHHcCCChhhCCCHHHHhh
Confidence            9999999999999998864

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.36  E-value=1.3e-12  Score=87.59  Aligned_cols=89  Identities=24%  Similarity=0.249  Sum_probs=57.8

Q ss_pred             CCcccCC---CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGS---GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~---~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+..+   .++.++||||||+++|++++|+.||....    .....+.......     .+.+....+        ..
T Consensus       176 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~----~~~~~~~~~~~~~-----~~~~~~~~~--------~~  238 (288)
T cd06616         176 PERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN----SVFDQLTQVVKGD-----PPILSNSEE--------RE  238 (288)
T ss_pred             HHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc----hHHHHHhhhcCCC-----CCcCCCcCC--------Cc
Confidence            5555554   68899999999999999999999975321    1111111111110     011111100        13


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ....+.+++..||+.+|.+||++.+|+..
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rpt~~~i~~~  267 (288)
T cd06616         239 FSPSFVNFINLCLIKDESKRPKYKELLEH  267 (288)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            45578899999999999999999998853

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.36  E-value=1.3e-12  Score=86.11  Aligned_cols=83  Identities=20%  Similarity=0.213  Sum_probs=56.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||+...+.++.++|+||||++++|+++|..|+....     ....+.....+....     +..            ....
T Consensus       171 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~-----~~~------------~~~~  228 (257)
T cd08225         171 PEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGYFAP-----ISP------------NFSR  228 (257)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcccCCC-----CCC------------CCCH
Confidence            566666778899999999999999999999975321     122222111111111     000            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       229 ~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         229 DLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhh
Confidence            6788999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.36  E-value=2e-12  Score=85.20  Aligned_cols=83  Identities=13%  Similarity=0.186  Sum_probs=57.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||...++.++.++|+||||++++++++|+.|+....     ..........+..     +.+            +.....
T Consensus       171 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~-----~~~~~~~~~~~~~-----~~~------------~~~~~~  228 (257)
T cd08223         171 PELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD-----MNSLVYRIIEGKL-----PPM------------PKDYSP  228 (257)
T ss_pred             hhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhcCC-----CCC------------ccccCH
Confidence            677777888999999999999999999999875321     1111111111111     001            013445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       229 ~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         229 ELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhc
Confidence            7889999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.35  E-value=1.8e-12  Score=87.10  Aligned_cols=89  Identities=16%  Similarity=0.258  Sum_probs=60.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++|+++ |..|+.....     .+............     .            +....
T Consensus       190 pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~-----~------------~~~~~  247 (288)
T cd05061         190 PESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVLKFVMDGGYLD-----Q------------PDNCP  247 (288)
T ss_pred             HHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCC-----C------------CCCCC
Confidence            566777788999999999999999998 6777643211     11111111111000     0            00234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++..||+.+|.+||++.++++.|....
T Consensus       248 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~  279 (288)
T cd05061         248 ERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL  279 (288)
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence            57889999999999999999999998887653

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.35  E-value=8.5e-13  Score=89.13  Aligned_cols=85  Identities=15%  Similarity=0.098  Sum_probs=56.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++||||||++++++++|+.||.......    .+. .......     +.+..          +.....
T Consensus       185 PE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~----~~~-~~~~~~~-----~~~~~----------~~~~~~  244 (296)
T cd06654         185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR----ALY-LIATNGT-----PELQN----------PEKLSA  244 (296)
T ss_pred             HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHH----hHH-HHhcCCC-----CCCCC----------ccccCH
Confidence            577777778899999999999999999999986322100    010 0000000     00000          113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       245 ~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         245 IFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHHHHHCcCCcccCcCHHHHhh
Confidence            6788999999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.35  E-value=5.2e-13  Score=88.26  Aligned_cols=87  Identities=20%  Similarity=0.283  Sum_probs=59.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++|+||||++++++++ |+.|+....  .........   .. .    .  .  ..+        ...+
T Consensus       173 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~--~~~~~~~~~---~~-~----~--~--~~~--------~~~~  230 (261)
T cd05034         173 PEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT--NREVLEQVE---RG-Y----R--M--PRP--------PNCP  230 (261)
T ss_pred             HHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cC-C----C--C--CCC--------CCCC
Confidence            566667778999999999999999998 898875321  111111111   10 0    0  0  000        0224


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++.+|+..+|.+||++.++...|+.
T Consensus       231 ~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~  260 (261)
T cd05034         231 EELYDLMLQCWDKDPEERPTFEYLQSFLED  260 (261)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence            567899999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.35  E-value=1.8e-12  Score=85.27  Aligned_cols=85  Identities=21%  Similarity=0.286  Sum_probs=58.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||+|++++++++ |..|+....     ............       ..  .        .+....
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~-------~~--~--------~~~~~~  233 (262)
T cd00192         176 PESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-----NEEVLEYLRKGY-------RL--P--------KPEYCP  233 (262)
T ss_pred             HHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC-------CC--C--------CCccCC
Confidence            566666788999999999999999999 688876431     111111111110       00  0        011334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ..+..++..||..+|.+||++.+++..|
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~l~~~l  261 (262)
T cd00192         234 DELYELMLSCWQLDPEDRPTFSELVERL  261 (262)
T ss_pred             hHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence            6788999999999999999999998876

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.35  E-value=9.4e-13  Score=88.04  Aligned_cols=83  Identities=22%  Similarity=0.312  Sum_probs=55.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHH-cCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEME-TTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++.. ..++.++||||||+++||++ +|..|+.....  .....+...          ...+..            ..
T Consensus       189 Pe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~----------~~~~~~------------~~  244 (274)
T cd05076         189 PECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP--SEKERFYEK----------KHRLPE------------PS  244 (274)
T ss_pred             chhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--HHHHHHHHh----------ccCCCC------------CC
Confidence            566654 45789999999999999995 58888753211  111111110          000111            12


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ...+.+++.+||+.+|.+||++.+++..|
T Consensus       245 ~~~~~~li~~cl~~~p~~Rps~~~il~~L  273 (274)
T cd05076         245 CKELATLISQCLTYEPTQRPSFRTILRDL  273 (274)
T ss_pred             ChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence            23578899999999999999999998876

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.34  E-value=9e-13  Score=94.45  Aligned_cols=94  Identities=18%  Similarity=0.236  Sum_probs=65.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc--CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET--TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      +|.+..|+|+.+||||+||+.+||+++  +..||.....+  ...+-....+...-...             ....|.-|
T Consensus       708 wEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~-------------~l~~P~~c  772 (807)
T KOG1094|consen  708 WESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQV-------------VLSRPPAC  772 (807)
T ss_pred             HHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCcce-------------eccCCCcC
Confidence            477888999999999999999999877  77788643211  12222222222211111             11233467


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      +..+++++++||..+..+||+|.++..-|..
T Consensus       773 p~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  773 PQGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             cHHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence            7889999999999999999999999887764

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.34  E-value=2.4e-12  Score=86.14  Aligned_cols=90  Identities=18%  Similarity=0.278  Sum_probs=59.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCc--HHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLN--LHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++....++.++|+||||+++|++++|+.|+.........  ............     .+.+...           ..
T Consensus       162 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----------~~  225 (279)
T cd06619         162 PERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVLPVG-----------QF  225 (279)
T ss_pred             ceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCCCCC-----------cC
Confidence            78888888999999999999999999999998653322111  111111101000     0111100           22


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ...+.+++.+||+.+|.+||++.+++..
T Consensus       226 ~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         226 SEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             CHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            3467889999999999999999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.34  E-value=2.5e-13  Score=96.49  Aligned_cols=79  Identities=20%  Similarity=0.345  Sum_probs=54.4

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      +++.++||||+||++|+|+.|+.||.....      .|      ..+..+.+|...-.++.     +  .....++++|-
T Consensus       548 Ki~r~SDvWSLGCILYqMvYgktPf~~~~n------~~------aKl~aI~~P~~~Iefp~-----~--~~~~~li~~mK  608 (677)
T KOG0596|consen  548 KISRKSDVWSLGCILYQMVYGKTPFGQIIN------QI------AKLHAITDPNHEIEFPD-----I--PENDELIDVMK  608 (677)
T ss_pred             eecCccchhhhhhHHHHHHhcCCchHHHHH------HH------HHHHhhcCCCccccccC-----C--CCchHHHHHHH
Confidence            478999999999999999999999864211      11      12333444433222221     0  11223889999


Q ss_pred             hccCCCccCCCCHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~  105 (127)
                      .|++.||.+||++.+++.
T Consensus       609 ~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  609 CCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             HHHhcCcccCCCcHHHhc
Confidence            999999999999999883

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.34  E-value=1.2e-12  Score=86.68  Aligned_cols=88  Identities=18%  Similarity=0.216  Sum_probs=56.7

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+ .++.++|+||||++++++++|+.|+...... ..+.....    ..     .+......       ......
T Consensus       175 Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~----~~-----~~~~~~~~-------~~~~~~  237 (267)
T cd06610         175 PEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQ----ND-----PPSLETGA-------DYKKYS  237 (267)
T ss_pred             hHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhc----CC-----CCCcCCcc-------cccccc
Confidence            5655555 6889999999999999999999998643211 11111111    00     00010000       001344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++..||..+|.+||++.+++.
T Consensus       238 ~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         238 KSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            67789999999999999999998864

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.34  E-value=3.6e-12  Score=84.10  Aligned_cols=83  Identities=13%  Similarity=0.123  Sum_probs=57.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++|+||||++++++++|+.|+....  ...+...+   .....     +.+            +.....
T Consensus       179 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~---~~~~~-----~~~------------~~~~~~  236 (265)
T cd08217         179 PEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKI---KEGKF-----RRI------------PYRYSS  236 (265)
T ss_pred             hhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHH---hcCCC-----CCC------------ccccCH
Confidence            677777778899999999999999999999986422  11111111   11110     011            113445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..|++.+|.+||++.+|+.
T Consensus       237 ~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         237 ELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhh
Confidence            7789999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.33  E-value=2e-12  Score=85.89  Aligned_cols=85  Identities=18%  Similarity=0.196  Sum_probs=54.5

Q ss_pred             CCcccCCC--CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSG--VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~--~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..+.  ++.++||||||+++|++++|..|+........  ..+... ...     ..+.+            +...
T Consensus       178 PE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~-~~~-----~~~~~------------~~~~  237 (268)
T cd06624         178 PEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVG-MFK-----IHPEI------------PESL  237 (268)
T ss_pred             hhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhh-hhc-----cCCCC------------Cccc
Confidence            56654433  78899999999999999999999753211100  000000 000     00111            1134


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+..++.+||+.+|.+||++.+++.
T Consensus       238 ~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         238 SAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             CHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            456788999999999999999998864

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.33  E-value=1.1e-12  Score=87.68  Aligned_cols=78  Identities=17%  Similarity=0.176  Sum_probs=51.4

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++|+||||+++||+++|..|+........ ...    ...     ...+.+..           ......+.+++
T Consensus       201 ~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-~~~----~~~-----~~~~~~~~-----------~~~~~~~~~li  259 (282)
T cd06636         201 ATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-LFL----IPR-----NPPPKLKS-----------KKWSKKFIDFI  259 (282)
T ss_pred             cCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-hhh----Hhh-----CCCCCCcc-----------cccCHHHHHHH
Confidence            4577899999999999999999999853221000 000    000     00011110           13345788999


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..||+.+|.+||++.+++.
T Consensus       260 ~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         260 EGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             HHHhCCChhhCcCHHHHhc
Confidence            9999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.33  E-value=2.9e-12  Score=86.56  Aligned_cols=85  Identities=16%  Similarity=0.128  Sum_probs=56.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||||+++|++++|+.|+.....    ... .........     +.+..          +.....
T Consensus       184 PE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~----~~~-~~~~~~~~~-----~~~~~----------~~~~~~  243 (296)
T cd06655         184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP----LRA-LYLIATNGT-----PELQN----------PEKLSP  243 (296)
T ss_pred             cchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHH-HHHHHhcCC-----cccCC----------cccCCH
Confidence            6777778889999999999999999999999864221    111 100000000     00000          012344


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       244 ~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         244 IFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHHHhhcChhhCCCHHHHhh
Confidence            6778999999999999999998873

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.33  E-value=3.5e-12  Score=88.14  Aligned_cols=78  Identities=15%  Similarity=0.209  Sum_probs=50.5

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      .+.++|||||||++||+++|+.||.....  ..............     .+..            +......+.+++..
T Consensus       250 ~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~-----~~~~------------~~~~~~~l~~li~~  310 (353)
T PLN00034        250 DGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMSQ-----PPEA------------PATASREFRHFISC  310 (353)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhccC-----CCCC------------CCccCHHHHHHHHH
Confidence            34689999999999999999999862211  11111111100000     0000            11334568899999


Q ss_pred             ccCCCccCCCCHHHHHH
Q 042057           89 CSMESPQDRMNITNVVH  105 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~~  105 (127)
                      ||+.+|.+||++.+++.
T Consensus       311 ~l~~~P~~Rpt~~ell~  327 (353)
T PLN00034        311 CLQREPAKRWSAMQLLQ  327 (353)
T ss_pred             HccCChhhCcCHHHHhc
Confidence            99999999999999875

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.33  E-value=2e-12  Score=86.89  Aligned_cols=86  Identities=14%  Similarity=0.069  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||++||+++|+.||.......  ....+.......       ..  ..        +.....
T Consensus       170 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~--~~~~~~~~~~~~-------~~--~~--------~~~~s~  230 (285)
T cd05631         170 PEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV--KREEVDRRVKED-------QE--EY--------SEKFSE  230 (285)
T ss_pred             HhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch--hHHHHHHHhhcc-------cc--cC--------CccCCH
Confidence            788888889999999999999999999999986432111  111111111100       00  00        012345


Q ss_pred             HHHHHhhhccCCCccCCCC-----HHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-----ITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-----~~~v~~  105 (127)
                      .+..++..||+.+|.+||+     +.+++.
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         231 DAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             HHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            6788999999999999997     566553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.33  E-value=3.1e-12  Score=84.36  Aligned_cols=84  Identities=14%  Similarity=0.196  Sum_probs=57.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++||+++|..|+....     ..........+.....                 +.....
T Consensus       170 pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~-----------------~~~~~~  227 (256)
T cd08221         170 PELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVKIVQGNYTPV-----------------VSVYSS  227 (256)
T ss_pred             HhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCCCC-----------------ccccCH
Confidence            566666678889999999999999999999975321     1122211111111110                 013345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+..++..||..+|.+||++.+++..
T Consensus       228 ~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         228 ELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHHHHcccCcccCCCHHHHhhC
Confidence            67889999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.33  E-value=8.6e-13  Score=87.62  Aligned_cols=83  Identities=19%  Similarity=0.204  Sum_probs=52.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||++++|+++|+.|+.....    . ..+.......    ..+.+            +.....
T Consensus       178 PE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~----~-~~~~~~~~~~----~~~~~------------~~~~~~  236 (266)
T cd06651         178 PEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEA----M-AAIFKIATQP----TNPQL------------PSHISE  236 (266)
T ss_pred             HHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccch----H-HHHHHHhcCC----CCCCC------------chhcCH
Confidence            5667677788999999999999999999999863211    1 1111111000    01111            112233


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++ .||..+|.+||++.+++.
T Consensus       237 ~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         237 HARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             HHHHHH-HHhcCChhhCcCHHHHhc
Confidence            444554 788899999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.33  E-value=9.9e-13  Score=87.27  Aligned_cols=83  Identities=12%  Similarity=0.188  Sum_probs=52.3

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      .+.++.++|+||||++++||++|..|+........    ...  ...  .....+....          .......+.++
T Consensus       183 ~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~----~~~--~~~--~~~~~~~~~~----------~~~~~~~~~~l  244 (267)
T cd06646         183 NGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA----LFL--MSK--SNFQPPKLKD----------KTKWSSTFHNF  244 (267)
T ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh----hee--eec--CCCCCCCCcc----------ccccCHHHHHH
Confidence            34577899999999999999999999753211100    000  000  0000011110          01234577899


Q ss_pred             hhhccCCCccCCCCHHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      +.+||..+|.+||++.+++..
T Consensus       245 i~~~l~~~P~~Rp~~~~il~~  265 (267)
T cd06646         245 VKISLTKNPKKRPTAERLLTH  265 (267)
T ss_pred             HHHHhhCChhhCcCHHHHhcC
Confidence            999999999999999998753

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.32  E-value=6.3e-12  Score=85.22  Aligned_cols=84  Identities=21%  Similarity=0.198  Sum_probs=55.1

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .+.++.++||||||+++||+++|..|+....     ............     .+.+.           ...
T Consensus       180 PE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~-----~~~~~~~~~~~~-----~~~~~-----------~~~  238 (307)
T cd06607         180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQND-----SPTLS-----------SND  238 (307)
T ss_pred             ceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCcc-----HHHHHHHHhcCC-----CCCCC-----------chh
Confidence            56552   4568889999999999999999999975321     111111000000     00110           012


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+..++.+||+.+|.+||++.+++.
T Consensus       239 ~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         239 WSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             hCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            3456889999999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.32  E-value=3.1e-12  Score=87.52  Aligned_cols=34  Identities=26%  Similarity=0.322  Sum_probs=28.8

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++..  ..++.++|||||||+++|+++|+.||..
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  212 (327)
T cd08227         177 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKD  212 (327)
T ss_pred             hHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence            566654  3588999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.32  E-value=3.2e-12  Score=84.44  Aligned_cols=87  Identities=16%  Similarity=0.233  Sum_probs=56.3

Q ss_pred             CCcccCC---CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGS---GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~---~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+...   .++.++|+||||+++++|++|+.|+........ ......    ...   ..+.+.          ....
T Consensus       170 Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~----~~~---~~~~~~----------~~~~  231 (262)
T cd06613         170 PEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISK----SNF---PPPKLK----------DKEK  231 (262)
T ss_pred             chhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHh----ccC---CCcccc----------chhh
Confidence            5666555   788899999999999999999999764221100 000000    000   000110          0113


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++.+||..+|..||++.+++.
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         232 WSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             hhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            4557889999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.32  E-value=4.2e-12  Score=86.15  Aligned_cols=105  Identities=15%  Similarity=0.188  Sum_probs=57.9

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cccccccccccc--------CC
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVDPILLN--------DG   66 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~--------~~   66 (127)
                      ||.+..  ..++.++|+||||+++||+++|+.||....... ............    .........+..        ..
T Consensus       177 PE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (314)
T cd08216         177 PEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQ-MLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNN  255 (314)
T ss_pred             HHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhccCccccccCchhhhcCCcCcccccccccch
Confidence            454433  347889999999999999999999986432111 111111100000    000000000000        00


Q ss_pred             CCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           67 KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ...............+.+++..||..+|.+||++.++++.
T Consensus       256 ~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  295 (314)
T cd08216         256 RDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH  295 (314)
T ss_pred             hhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence            0000111122345678899999999999999999998853

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.32  E-value=5.1e-12  Score=84.92  Aligned_cols=77  Identities=18%  Similarity=0.241  Sum_probs=50.4

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      ++.++||||||++++|+++|+.|+.....    ...... .......     .+..          +......+.+++.+
T Consensus       210 ~~~~~Di~slGvi~~el~~g~~p~~~~~~----~~~~~~-~~~~~~~-----~~~~----------~~~~~~~l~~li~~  269 (291)
T cd06639         210 YDARCDVWSLGITAIELGDGDPPLFDMHP----VKTLFK-IPRNPPP-----TLLH----------PEKWCRSFNHFISQ  269 (291)
T ss_pred             cCCccchHHHHHHHHHHhhCCCCCCCCcH----HHHHHH-HhcCCCC-----CCCc----------ccccCHHHHHHHHH
Confidence            68899999999999999999999763211    111111 0011000     1100          01233467889999


Q ss_pred             ccCCCccCCCCHHHHHH
Q 042057           89 CSMESPQDRMNITNVVH  105 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~~  105 (127)
                      ||+.+|.+||++.+++.
T Consensus       270 ~l~~~p~~Rps~~~il~  286 (291)
T cd06639         270 CLIKDFEARPSVTHLLE  286 (291)
T ss_pred             HhhcChhhCcCHHHHhc
Confidence            99999999999998864

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.32  E-value=1.5e-12  Score=86.27  Aligned_cols=83  Identities=16%  Similarity=0.096  Sum_probs=56.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|+||||++++++++|+.||.....    ... +....     ....+.+.            .....
T Consensus       181 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~-~~~~~-----~~~~~~~~------------~~~~~  238 (267)
T cd06628         181 PEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ----LQA-IFKIG-----ENASPEIP------------SNISS  238 (267)
T ss_pred             hhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH----HHH-HHHHh-----ccCCCcCC------------cccCH
Confidence            5666677788899999999999999999999864211    111 10000     00111111            13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       239 ~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         239 EAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             HHHHHHHHHccCCchhCcCHHHHhh
Confidence            6788999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.31  E-value=4e-12  Score=85.07  Aligned_cols=80  Identities=18%  Similarity=0.195  Sum_probs=51.8

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...++.++||||||+++|++++|+.|+.....     ...+.........     .+..          +......+.++
T Consensus       182 ~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~~l  241 (282)
T cd06643         182 DRPYDYKADVWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPP-----TLAQ----------PSRWSSEFKDF  241 (282)
T ss_pred             CCCCCccchhhhHHHHHHHHccCCCCccccCH-----HHHHHHHhhcCCC-----CCCC----------ccccCHHHHHH
Confidence            34577899999999999999999999754221     1111111111000     0000          01234567899


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||+.+|.+||++.+++.
T Consensus       242 i~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         242 LKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             HHHHccCChhhCcCHHHHhc
Confidence            99999999999999998763

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=99.31  E-value=7.3e-13  Score=89.82  Aligned_cols=86  Identities=16%  Similarity=0.150  Sum_probs=58.1

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.. ..++||||+||+++||+||+.||...    .....++.......    ..|.            +|...+
T Consensus       190 PEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~----~~~~~~~~~ig~~~----~~P~------------ip~~ls  249 (313)
T KOG0198|consen  190 PEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF----FEEAEALLLIGRED----SLPE------------IPDSLS  249 (313)
T ss_pred             chhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh----cchHHHHHHHhccC----CCCC------------CCcccC
Confidence            788886543 45999999999999999999998753    11111111111111    1111            122455


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ....+++..|+..+|..|||+.+++..
T Consensus       250 ~~a~~Fl~~C~~~~p~~Rpta~eLL~h  276 (313)
T KOG0198|consen  250 DEAKDFLRKCFKRDPEKRPTAEELLEH  276 (313)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence            677889999999999999999998865

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.31  E-value=1.2e-12  Score=87.86  Aligned_cols=104  Identities=14%  Similarity=0.031  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc---CCcccccc--ccccccCCCCcchhhhH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL---PDHVVYIV--DPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~   75 (127)
                      ||.+....++.++|||||||+++|+++|+.||..... ...+...+....   +..+....  ........+........
T Consensus       178 PE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (290)
T cd07862         178 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFV  256 (290)
T ss_pred             hHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCH-HHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHc
Confidence            6777777889999999999999999999999864321 111111111000   00000000  00000000000001111


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......+.+++.+|++.+|.+||++.+++.
T Consensus       257 ~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  286 (290)
T cd07862         257 TDIDELGKDLLLKCLTFNPAKRISAYSALS  286 (290)
T ss_pred             cCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence            123456779999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.31  E-value=6.1e-12  Score=84.33  Aligned_cols=102  Identities=15%  Similarity=0.077  Sum_probs=58.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHH-----------hhcCC-ccccccccccccCCCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFAR-----------MALPD-HVVYIVDPILLNDGKG   68 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~-~~~~~~~~~~~~~~~~   68 (127)
                      ||++.++.++.++|||||||+++|+++|+.||....... .+.....           ..... .......+......  
T Consensus       170 PE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  246 (287)
T cd07848         170 PELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQ--  246 (287)
T ss_pred             cHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcc--
Confidence            677777889999999999999999999999986432111 0100000           00000 00000000000000  


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .............+.+++.+|+..+|.+|||+.+++.
T Consensus       247 ~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         247 SLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             cHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            0000001123457899999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.31  E-value=4.9e-12  Score=84.14  Aligned_cols=88  Identities=16%  Similarity=0.125  Sum_probs=55.2

Q ss_pred             CCcccCCC--CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSG--VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~--~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+....  ++.++|+||||++++++++|..|+....    ... .............+.....            ...
T Consensus       179 PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~----~~~-~~~~~~~~~~~~~~~~~~~------------~~~  241 (272)
T cd06629         179 PEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEE----AIA-AMFKLGNKRSAPPIPPDVS------------MNL  241 (272)
T ss_pred             HHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcc----hHH-HHHHhhccccCCcCCcccc------------ccC
Confidence            45444433  7889999999999999999999975321    111 1111111111111111111            133


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+.+++..||..+|.+||++.+|+.
T Consensus       242 ~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         242 SPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             CHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            457788999999999999999998874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.30  E-value=3.5e-12  Score=91.52  Aligned_cols=83  Identities=17%  Similarity=0.147  Sum_probs=57.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++||++|+.|+....     ..........+....     .            +.....
T Consensus       240 PE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~~~~~~-----~------------~~~~s~  297 (478)
T PTZ00267        240 PELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLYGKYDP-----F------------PCPVSS  297 (478)
T ss_pred             HhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCC-----C------------CccCCH
Confidence            677778889999999999999999999999985321     111121111111000     0            012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       298 ~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        298 GMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHHh
Confidence            6789999999999999999998864

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.30  E-value=4e-12  Score=85.38  Aligned_cols=85  Identities=16%  Similarity=0.101  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++||||||++++++++|+.|+....     ............     .+.+...          .....
T Consensus       184 PE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~~----------~~~~~  243 (285)
T cd06648         184 PEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP-----PLQAMKRIRDNL-----PPKLKNL----------HKVSP  243 (285)
T ss_pred             HHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHhcC-----CCCCccc----------ccCCH
Confidence            566666778999999999999999999999975321     111111111110     0111100          02345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||++.+++.
T Consensus       244 ~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         244 RLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHHHHHcccChhhCcCHHHHcc
Confidence            7889999999999999999998874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.30  E-value=5.3e-12  Score=83.70  Aligned_cols=85  Identities=20%  Similarity=0.266  Sum_probs=57.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||++++++++|..|+.....    .............    .+.+..            ....
T Consensus       177 pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~----~~~~~~~~~~~~~----~~~~~~------------~~~~  236 (265)
T cd06631         177 PEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR----LAAMFYIGAHRGL----MPRLPD------------SFSA  236 (265)
T ss_pred             hhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCCh----HHHHHHhhhccCC----CCCCCC------------CCCH
Confidence            6777777889999999999999999999999863211    1111100000000    011111            3345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++.+||..+|.+||++.+++.
T Consensus       237 ~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         237 AAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhc
Confidence            6788999999999999999998764

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=1.7e-12  Score=92.06  Aligned_cols=86  Identities=16%  Similarity=0.169  Sum_probs=61.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....|..++||||+||+++||+-|..||..    +..+ ..++.......     +.+.          .+.....
T Consensus       438 PEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~Pl-rAlyLIa~ng~-----P~lk----------~~~klS~  497 (550)
T KOG0578|consen  438 PEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPL-RALYLIATNGT-----PKLK----------NPEKLSP  497 (550)
T ss_pred             hhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChH-HHHHHHhhcCC-----CCcC----------CccccCH
Confidence            7888888999999999999999999999999852    1111 11111111111     1111          1235667


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+.++..+|+..++.+|+++.+++..
T Consensus       498 ~~kdFL~~cL~~dv~~RasA~eLL~H  523 (550)
T KOG0578|consen  498 ELKDFLDRCLVVDVEQRASAKELLEH  523 (550)
T ss_pred             HHHHHHHHHhhcchhcCCCHHHHhcC
Confidence            88999999999999999999998843

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.30  E-value=6.3e-12  Score=86.33  Aligned_cols=34  Identities=29%  Similarity=0.405  Sum_probs=30.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++|||||||+++++++|+.|+..
T Consensus       171 PE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~  204 (333)
T cd06650         171 PERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP  204 (333)
T ss_pred             HHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            6777777899999999999999999999999863

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.29  E-value=7.5e-12  Score=82.65  Aligned_cols=87  Identities=20%  Similarity=0.203  Sum_probs=59.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH-HH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA-CV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~   79 (127)
                      ||.+..+.++.++|+||||++++++++|+.|+.....  ...............     +.+..            . ..
T Consensus       169 pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~-----~~~~~------------~~~~  229 (264)
T cd06623         169 PERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQ--PSFFELMQAICDGPP-----PSLPA------------EEFS  229 (264)
T ss_pred             HhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccc--cCHHHHHHHHhcCCC-----CCCCc------------ccCC
Confidence            5667777888999999999999999999999864321  111121111111110     11110            2 44


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ..+.+++..||..+|.+||++.+++..
T Consensus       230 ~~l~~li~~~l~~~p~~R~~~~~ll~~  256 (264)
T cd06623         230 PEFRDFISACLQKDPKKRPSAAELLQH  256 (264)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            678899999999999999999998863

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.29  E-value=5e-12  Score=88.00  Aligned_cols=92  Identities=15%  Similarity=0.170  Sum_probs=59.6

Q ss_pred             CCcc--cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYG--LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~--~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++  ....|+.|+|||||||...|+.+|..||.....    +..+..+..+. ........+.        -....-.
T Consensus       199 PEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP----mkvLl~tLqn~-pp~~~t~~~~--------~d~~k~~  265 (516)
T KOG0582|consen  199 PEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP----MKVLLLTLQND-PPTLLTSGLD--------KDEDKKF  265 (516)
T ss_pred             hHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh----HHHHHHHhcCC-CCCcccccCC--------hHHhhhh
Confidence            5553  234799999999999999999999999864321    22222222221 1111100110        1122345


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+..++..|+..||.+|||+.+++.
T Consensus       266 ~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  266 SKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             cHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            668999999999999999999998874

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.29  E-value=8.5e-12  Score=83.93  Aligned_cols=79  Identities=16%  Similarity=0.206  Sum_probs=51.3

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++|+||||+++|++++|..|+.....     ...........     .+....          +......+.+++
T Consensus       190 ~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~li  249 (292)
T cd06644         190 TPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSE-----PPTLSQ----------PSKWSMEFRDFL  249 (292)
T ss_pred             CCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHHHhcCC-----CccCCC----------CcccCHHHHHHH
Confidence            4467789999999999999999998753211     11111111110     011100          113344678899


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+||..+|.+||++.+++.
T Consensus       250 ~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         250 KTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             HHHhcCCcccCcCHHHHhc
Confidence            9999999999999998874

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.29  E-value=2.1e-12  Score=86.07  Aligned_cols=87  Identities=21%  Similarity=0.317  Sum_probs=58.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..|+.....  .   ..+......... .   ....            ...
T Consensus       187 PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~---~~~~~~~~~~~~-~---~~~~------------~~~  245 (275)
T cd05046         187 PEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--E---EVLNRLQAGKLE-L---PVPE------------GCP  245 (275)
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--H---HHHHHHHcCCcC-C---CCCC------------CCC
Confidence            566677778899999999999999998 7778753211  1   111111111100 0   0000            234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+..++.+||+.+|.+||++.+++..|.
T Consensus       246 ~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~  274 (275)
T cd05046         246 SRLYKLMTRCWAVNPKDRPSFSELVSALG  274 (275)
T ss_pred             HHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence            57889999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.29  E-value=2.8e-12  Score=85.82  Aligned_cols=86  Identities=17%  Similarity=0.113  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++||||+||+++|+++|+.|+....... .............        +...         ......
T Consensus       163 PE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~--------~~~~---------~~~~~~  224 (277)
T cd05607         163 PEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDE--------VKFE---------HQNFTE  224 (277)
T ss_pred             HHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhccc--------cccc---------cccCCH
Confidence            677777889999999999999999999999986432111 1111111111110        0000         002344


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .+.+++..||+.+|.+||++.+++
T Consensus       225 ~~~~li~~~L~~~P~~R~~~~~~~  248 (277)
T cd05607         225 ESKDICRLFLAKKPEDRLGSREKN  248 (277)
T ss_pred             HHHHHHHHHhccCHhhCCCCccch
Confidence            678999999999999999997765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.29  E-value=1.4e-12  Score=89.34  Aligned_cols=101  Identities=13%  Similarity=-0.019  Sum_probs=55.4

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc------------cccccccccccCC
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH------------VVYIVDPILLNDG   66 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~   66 (127)
                      ||++..  ..++.++|||||||+++||++|+.||.....  ......+.......            ....+. .+....
T Consensus       175 PE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~  251 (338)
T cd07859         175 PELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETISRVRNEKARRYLS-SMRKKQ  251 (338)
T ss_pred             HHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH-hhcccC
Confidence            455543  5788899999999999999999999853211  00111111100000            000000 000000


Q ss_pred             CCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           67 KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +. ............+.+++.+||+.+|.+||++.+++.
T Consensus       252 ~~-~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         252 PV-PFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             CC-chHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            00 000000012345688999999999999999999884

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.29  E-value=3.5e-13  Score=91.68  Aligned_cols=84  Identities=19%  Similarity=0.174  Sum_probs=56.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||+++|+++|+.||....     .............      ...            .....
T Consensus       162 PE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~~------~~~------------~~~~~  218 (312)
T cd05585         162 PELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEPL------RFP------------DGFDR  218 (312)
T ss_pred             HHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCC------CCC------------CcCCH
Confidence            677777889999999999999999999999986321     1122221111100      000            12335


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      .+.+++..||..+|.+||++..+.+.|
T Consensus       219 ~~~~li~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         219 DAKDLLIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             HHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence            678899999999999998754443333

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.29  E-value=5.8e-12  Score=84.96  Aligned_cols=86  Identities=14%  Similarity=0.081  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|+||||+++|++++|+.||........     +.......     .+...          .+.....
T Consensus       184 PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-----~~~~~~~~-----~~~~~----------~~~~~~~  243 (293)
T cd06647         184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-----LYLIATNG-----TPELQ----------NPEKLSA  243 (293)
T ss_pred             chhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-----eeehhcCC-----CCCCC----------CccccCH
Confidence            6777777889999999999999999999999863221100     00000000     00000          0112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+.+++..||+.+|.+||++.+++..
T Consensus       244 ~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         244 IFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcC
Confidence            67889999999999999999988743

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.28  E-value=6.5e-12  Score=83.48  Aligned_cols=84  Identities=14%  Similarity=0.243  Sum_probs=52.2

Q ss_pred             CCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            7 SGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ..++.++|||||||++||+++ |..|+.....     .+...............+.+..            .....+..+
T Consensus       184 ~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~  246 (269)
T cd05042         184 KDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-----EQVLKQVVREQDIKLPKPQLDL------------KYSDRWYEV  246 (269)
T ss_pred             cccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhhccCccCCCCcccc------------cCCHHHHHH
Confidence            356789999999999999998 7777753211     1111111111111112222211            233456678


Q ss_pred             hhhccCCCccCCCCHHHHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      +..|| .+|.+||++.+|.+.|.
T Consensus       247 ~~~~~-~dp~~Rpt~~~v~~~l~  268 (269)
T cd05042         247 MQFCW-LDPETRPTAEEVHELLT  268 (269)
T ss_pred             HHHHh-cCcccccCHHHHHHHhc
Confidence            88899 49999999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.28  E-value=2.8e-12  Score=84.53  Aligned_cols=83  Identities=19%  Similarity=0.315  Sum_probs=55.6

Q ss_pred             CCcccCC--CCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGS--GVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~--~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++...  .++.++||||||+++|++++ +..|+.......  ...+..    .      ......            .
T Consensus       173 PE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~--~~~~~~----~------~~~~~~------------~  228 (259)
T cd05037         173 PECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE--KERFYQ----D------QHRLPM------------P  228 (259)
T ss_pred             hhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh--HHHHHh----c------CCCCCC------------C
Confidence            6776665  78899999999999999999 566664322110  000000    0      000000            1


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ....+.+++..||..+|.+||++.+++..|
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rpt~~~il~~l  258 (259)
T cd05037         229 DCAELANLINQCWTYDPTKRPSFRAILRDL  258 (259)
T ss_pred             CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence            125778999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.28  E-value=5.5e-12  Score=86.30  Aligned_cols=112  Identities=19%  Similarity=0.226  Sum_probs=60.8

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHh-hc----------------------CCccc
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARM-AL----------------------PDHVV   55 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------------~~~~~   55 (127)
                      ||++.+  ..++.++||||||++++|+++|+.|+........ ....... .+                      .....
T Consensus       177 PE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (328)
T cd08226         177 PELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIG  255 (328)
T ss_pred             hhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccchhhhhhccchhhhhcccc
Confidence            566654  3478899999999999999999999864321110 0000000 00                      00000


Q ss_pred             c-ccccccccCCCCc-chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH--HHHHhHHH
Q 042057           56 Y-IVDPILLNDGKGE-TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH--ELQSVKNI  113 (127)
Q Consensus        56 ~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~--~L~~~~~~  113 (127)
                      . .+........... ............+.+++.+||..+|.+|||+.+++.  .+..+..+
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~  317 (328)
T cd08226         256 ESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ  317 (328)
T ss_pred             cchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence            0 0000000000000 000012245667899999999999999999999873  35544443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>PTZ00284 protein kinase; Provisional

Probab=99.28  E-value=4e-12  Score=90.93  Aligned_cols=34  Identities=32%  Similarity=0.360  Sum_probs=31.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||++|||++|+.||..
T Consensus       314 PE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~  347 (467)
T PTZ00284        314 PEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT  347 (467)
T ss_pred             cHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            7888888899999999999999999999999864

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.28  E-value=1.3e-11  Score=82.78  Aligned_cols=78  Identities=18%  Similarity=0.254  Sum_probs=51.7

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      ++.++|+||||++++++++|+.||....  ...............     .+.+            +......+..++..
T Consensus       184 ~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~~~~~~~~~-----~~~~------------~~~~~~~~~~li~~  244 (286)
T cd06622         184 YTVQSDVWSLGLSILEMALGRYPYPPET--YANIFAQLSAIVDGD-----PPTL------------PSGYSDDAQDFVAK  244 (286)
T ss_pred             CCcccchHhHHHHHHHHHhCCCCCCCcc--hhhHHHHHHHHhhcC-----CCCC------------CcccCHHHHHHHHH
Confidence            4789999999999999999999985321  111111111111100     0011            11345677899999


Q ss_pred             ccCCCccCCCCHHHHHH
Q 042057           89 CSMESPQDRMNITNVVH  105 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~~  105 (127)
                      ||..+|.+||++.+++.
T Consensus       245 ~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         245 CLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             HcccCcccCCCHHHHhc
Confidence            99999999999998885

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.28  E-value=9.9e-12  Score=83.33  Aligned_cols=85  Identities=16%  Similarity=0.172  Sum_probs=56.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|+||||++++++++|+.|+.....    ....... ......     ....          ......
T Consensus       185 PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~-----~~~~----------~~~~~~  244 (286)
T cd06614         185 PEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP----LRALFLI-TTKGIP-----PLKN----------PEKWSP  244 (286)
T ss_pred             HhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH----HHHHHHH-HhcCCC-----CCcc----------hhhCCH
Confidence            5666677789999999999999999999999753211    1111100 000000     0000          012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       245 ~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         245 EFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHHHHhccChhhCcCHHHHhh
Confidence            6788999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.27  E-value=7.3e-12  Score=83.45  Aligned_cols=85  Identities=15%  Similarity=0.104  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++||||||++++++++|+.|+............+.... .        ....          .+.....
T Consensus       175 PE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~--------~~~~----------~~~~~~~  235 (267)
T PHA03390        175 PEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-Q--------KKLP----------FIKNVSK  235 (267)
T ss_pred             hhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-c--------ccCC----------cccccCH
Confidence            6788788899999999999999999999999874322221112221111 0        0000          0113445


Q ss_pred             HHHHHhhhccCCCccCCCC-HHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-ITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-~~~v~  104 (127)
                      .+.+++..||+.+|.+||+ +.+++
T Consensus       236 ~~~~li~~~l~~~p~~R~~~~~~~l  260 (267)
T PHA03390        236 NANDFVQSMLKYNINYRLTNYNEII  260 (267)
T ss_pred             HHHHHHHHHhccChhhCCchHHHHh
Confidence            6788999999999999996 67765

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.27  E-value=6e-12  Score=84.09  Aligned_cols=79  Identities=19%  Similarity=0.319  Sum_probs=51.8

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++|+||||++++++++|+.|+......   +. ........     ..+.+...           ..+..+..++
T Consensus       182 ~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~-~~~~~~~~-----~~~~~~~~-----------~~~~~l~~li  241 (283)
T cd06617         182 KGYDVKSDVWSLGITMIELATGRFPYDSWKTP---FQ-QLKQVVEE-----PSPQLPAE-----------KFSPEFQDFV  241 (283)
T ss_pred             cccCccccchhhHHHHHHHHhCCCCCCccccC---HH-HHHHHHhc-----CCCCCCcc-----------ccCHHHHHHH
Confidence            34688999999999999999999997532111   11 11110111     00111100           2345678999


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..||..+|.+||++.+++.
T Consensus       242 ~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         242 NKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             HHHccCChhhCcCHHHHhc
Confidence            9999999999999999875

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.27  E-value=3.8e-12  Score=85.86  Aligned_cols=80  Identities=18%  Similarity=0.223  Sum_probs=51.8

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.++||||||++++++++|+.|+......    ............     +.+...          ......+.+++.
T Consensus       194 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~~-----~~~~~~----------~~~~~~l~~li~  254 (296)
T cd06618         194 KYDIRADVWSLGISLVELATGQFPYKNCKTE----FEVLTKILQEEP-----PSLPPN----------EGFSPDFCSFVD  254 (296)
T ss_pred             ccccchhHHHHHHHHHHHHhCCCCCCcchhH----HHHHHHHhcCCC-----CCCCCC----------CCCCHHHHHHHH
Confidence            3788999999999999999999998532111    111111111100     001000          023456788999


Q ss_pred             hccCCCccCCCCHHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~~  106 (127)
                      .||+.+|.+||++.+++..
T Consensus       255 ~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         255 LCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             HHccCChhhCCCHHHHhcC
Confidence            9999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.27  E-value=3.7e-12  Score=84.22  Aligned_cols=86  Identities=19%  Similarity=0.234  Sum_probs=54.7

Q ss_pred             CCcccCCC---CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSG---VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~---~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++....   ++.++||||||++++++++|..||......   . .........     ..+.+...          ..
T Consensus       172 PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~---~-~~~~~~~~~-----~~~~~~~~----------~~  232 (264)
T cd06626         172 PEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE---F-QIMFHVGAG-----HKPPIPDS----------LQ  232 (264)
T ss_pred             hhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch---H-HHHHHHhcC-----CCCCCCcc----------cc
Confidence            56665555   788999999999999999999998632211   0 011000000     01111110          02


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++..||+.+|.+||++.+++.
T Consensus       233 ~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         233 LSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            2445678999999999999999998763

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.27  E-value=5.1e-12  Score=84.71  Aligned_cols=103  Identities=17%  Similarity=0.048  Sum_probs=58.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhh---cCCcccccc---ccccccCCCCcchhhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMA---LPDHVVYIV---DPILLNDGKGETRINS   74 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~~~   74 (127)
                      ||++.++.++.++||||+||+++++++|+.|+...... ..+.......   ....+....   .......... .....
T Consensus       176 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  253 (288)
T cd07863         176 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPR-PVQSV  253 (288)
T ss_pred             chHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhCcccccccccccCCCCCC-chHHh
Confidence            78787888999999999999999999999887532111 1111111000   000000000   0000000000 00001


Q ss_pred             HHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           75 RLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        75 ~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .......+.+++.+|++.+|.+||++.+++.
T Consensus       254 ~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~  284 (288)
T cd07863         254 VPEIEESGAQLLLEMLTFNPHKRISAFRALQ  284 (288)
T ss_pred             CcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1123456789999999999999999988763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.27  E-value=4.9e-12  Score=84.50  Aligned_cols=84  Identities=17%  Similarity=0.252  Sum_probs=57.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++|+||||++++++++|..|+.....     ...........     .+.+..            ....
T Consensus       170 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~-----~~~~~~------------~~~~  227 (277)
T cd06641         170 PEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNN-----PPTLEG------------NYSK  227 (277)
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCC-----CCCCCc------------ccCH
Confidence            6777777888999999999999999999999753211     11111000000     011111            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+.+++.+||+.+|.+||++.+++..
T Consensus       228 ~~~~~i~~~l~~~p~~Rp~~~~~l~~  253 (277)
T cd06641         228 PLKEFVEACLNKEPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHhC
Confidence            67889999999999999999998873

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.27  E-value=1e-11  Score=83.12  Aligned_cols=80  Identities=16%  Similarity=0.251  Sum_probs=51.9

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++||||||+++||+++|+.|+.....    ...... ....     ..+.+..          +......+..++
T Consensus       204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~----~~~~~~-~~~~-----~~~~~~~----------~~~~~~~~~~li  263 (286)
T cd06638         204 STYDARCDVWSLGITAIELGDGDPPLADLHP----MRALFK-IPRN-----PPPTLHQ----------PELWSNEFNDFI  263 (286)
T ss_pred             ccccchhhhhhHHHHHHHHhcCCCCCCCCch----hHHHhh-cccc-----CCCcccC----------CCCcCHHHHHHH
Confidence            4478899999999999999999999753211    111100 0000     0001100          002234678999


Q ss_pred             hhccCCCccCCCCHHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+||+.+|.+||++.+++..
T Consensus       264 ~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         264 RKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             HHHccCCcccCCCHHHHhhc
Confidence            99999999999999998764

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.27  E-value=1.3e-11  Score=80.92  Aligned_cols=85  Identities=16%  Similarity=0.089  Sum_probs=57.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+..+.++||||||++++++++|..|+....    ............        ......        +.....
T Consensus       172 pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~--------~~~~~~--------~~~~~~  231 (260)
T cd06606         172 PEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELG----NPMAALYKIGSS--------GEPPEI--------PEHLSE  231 (260)
T ss_pred             HhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----chHHHHHhcccc--------CCCcCC--------CcccCH
Confidence            566667778999999999999999999999986432    111111111100        000001        113356


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+|+..+|.+||++.+++.
T Consensus       232 ~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         232 EAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             HHHHHHHHhCcCChhhCCCHHHHhh
Confidence            7888999999999999999999874

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.27  E-value=1.1e-11  Score=81.52  Aligned_cols=85  Identities=22%  Similarity=0.316  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++|+||+|++++++++ |..|+...     ...............     ..            +....
T Consensus       173 Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~-----~~~~~~~~~~~~~~~-----~~------------~~~~~  230 (258)
T smart00219      173 PESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM-----SNEEVLEYLKKGYRL-----PK------------PENCP  230 (258)
T ss_pred             hHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHhcCCCC-----CC------------CCcCC
Confidence            566667778999999999999999998 77776531     111111111111100     00            00234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      ..+.+++.+|+..+|.+|||+.+++..|
T Consensus       231 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      231 PEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            5678899999999999999999988654

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.26  E-value=1.3e-11  Score=81.16  Aligned_cols=83  Identities=18%  Similarity=0.134  Sum_probs=56.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|+||||++++++++|+.|+....     ...............                 .+.....
T Consensus       170 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~-----------------~~~~~~~  227 (256)
T cd08530         170 PEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARS-----MQDLRYKVQRGKYPP-----------------IPPIYSQ  227 (256)
T ss_pred             HHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCCCC-----------------CchhhCH
Confidence            566666778889999999999999999999975321     111111111111110                 0113456


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..|+..+|.+||++.+++.
T Consensus       228 ~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         228 DLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHhc
Confidence            7899999999999999999998864

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.26  E-value=1.7e-11  Score=81.84  Aligned_cols=102  Identities=15%  Similarity=0.054  Sum_probs=58.2

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccccccc------cccccCCCCc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVD------PILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~~~~~~~~   69 (127)
                      ||.+.+. .++.++|+||+|++++++++|+.||.....  .............    .+.....      ...... ...
T Consensus       167 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  243 (283)
T cd05118         167 PELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSE--IDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKK-AGM  243 (283)
T ss_pred             cHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccc-ccc
Confidence            5655555 678999999999999999999988753221  1111111111110    0000000      000000 000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++..||+.+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         244 PLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA  279 (283)
T ss_pred             CHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence            011122245678899999999999999999998864

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.26  E-value=1e-11  Score=81.18  Aligned_cols=85  Identities=18%  Similarity=0.200  Sum_probs=55.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|+||||++++++++|+.|+.....     ...........     .+.+...          .....
T Consensus       166 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~-----~~~~~~~----------~~~~~  225 (253)
T cd05122         166 PEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPP-----MKALFKIATNG-----PPGLRNP----------EKWSD  225 (253)
T ss_pred             HHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCch-----HHHHHHHHhcC-----CCCcCcc----------cccCH
Confidence            5666677788999999999999999999999763210     01110000000     0001000          01245


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       226 ~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         226 EFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            6788999999999999999998864

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.26  E-value=5e-12  Score=85.45  Aligned_cols=85  Identities=15%  Similarity=0.095  Sum_probs=56.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|+||||++++++++|+.||........ ..    ......     .+...          .+.....
T Consensus       184 PE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~-~~----~~~~~~-----~~~~~----------~~~~~~~  243 (297)
T cd06656         184 PEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY----LIATNG-----TPELQ----------NPERLSA  243 (297)
T ss_pred             HHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh-ee----eeccCC-----CCCCC----------CccccCH
Confidence            5666677788999999999999999999999853211000 00    000000     00000          0113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       244 ~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         244 VFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            5778999999999999999999885

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.26  E-value=5.6e-12  Score=83.64  Aligned_cols=87  Identities=16%  Similarity=0.192  Sum_probs=53.8

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .+.++.++|+||||++++++++|..|+........    ........ .   ..+......          .
T Consensus       175 PE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~----~~~~~~~~-~---~~~~~~~~~----------~  236 (267)
T cd06645         175 PEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA----LFLMTKSN-F---QPPKLKDKM----------K  236 (267)
T ss_pred             hhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh----HHhhhccC-C---CCCcccccC----------C
Confidence            55542   45688899999999999999999999753221110    00000000 0   001111000          1


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++.+|++.+|.+||++.+++.
T Consensus       237 ~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         237 WSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            2345788999999999999999998764

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.26  E-value=1.4e-11  Score=82.29  Aligned_cols=104  Identities=13%  Similarity=-0.012  Sum_probs=58.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC-C--cccccc--ccccccCCCCcchhhhH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-D--HVVYIV--DPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~--~~~~~~~~~~~~~~~~~   75 (127)
                      ||++....++.++|+||||+++++|++|..|+..... ...+......... .  ......  .................
T Consensus       175 PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (287)
T cd07838         175 PEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFV  253 (287)
T ss_pred             hHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhh
Confidence            6677777889999999999999999999888753221 1111111111000 0  000000  00000000000001111


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......+.+++.+||+.+|.+||++.+++.
T Consensus       254 ~~~~~~~~~li~~~l~~dp~~Rp~~~~il~  283 (287)
T cd07838         254 PEICEEGLDLLKKMLTFNPHKRISAFEALQ  283 (287)
T ss_pred             hhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence            233466789999999999999999998763

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=7.3e-12  Score=83.52  Aligned_cols=84  Identities=21%  Similarity=0.286  Sum_probs=54.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+ .++.++|+||||+++|++++|..|+.....     ...... .    .....+.+...           ...
T Consensus       170 PE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-----~~~~~~-~----~~~~~~~~~~~-----------~~~  228 (277)
T cd06917         170 PEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA-----FRAMML-I----PKSKPPRLEDN-----------GYS  228 (277)
T ss_pred             HHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh-----hhhhhc-c----ccCCCCCCCcc-----------cCC
Confidence            4555443 468899999999999999999999863211     111100 0    00001111111           134


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||..+|.+||++.+++.
T Consensus       229 ~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         229 KLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            56788999999999999999999875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.25  E-value=5.9e-12  Score=85.79  Aligned_cols=85  Identities=20%  Similarity=0.166  Sum_probs=55.6

Q ss_pred             CCcc---cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYG---LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~---~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++   ..+.++.++||||||++++|+++|+.|+....     .............     +....           ..
T Consensus       190 PE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~~-----~~~~~-----------~~  248 (317)
T cd06635         190 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNES-----PTLQS-----------NE  248 (317)
T ss_pred             hhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHhccC-----CCCCC-----------cc
Confidence            5655   34568899999999999999999999975321     0011110011100     00000           02


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ....+.+++.+||+.+|.+||++.+++..
T Consensus       249 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~  277 (317)
T cd06635         249 WSDYFRNFVDSCLQKIPQDRPTSEELLKH  277 (317)
T ss_pred             ccHHHHHHHHHHccCCcccCcCHHHHHhC
Confidence            34467889999999999999999999864

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.25  E-value=1.7e-12  Score=88.56  Aligned_cols=81  Identities=17%  Similarity=0.114  Sum_probs=55.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||+++++++|+.||....     .............      ..            +.....
T Consensus       165 PE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~~~~~~~i~~~~~------~~------------~~~~~~  221 (318)
T cd05570         165 PEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----EDELFQSILEDEV------RY------------PRWLSK  221 (318)
T ss_pred             HHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----HHHHHHHHHcCCC------CC------------CCcCCH
Confidence            677778889999999999999999999999986322     1111111111100      00            012345


Q ss_pred             HHHHHhhhccCCCccCCCCH-----HHHH
Q 042057           81 SMVRIGVACSMESPQDRMNI-----TNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~-----~~v~  104 (127)
                      .+.+++.+||..+|.+||++     .+++
T Consensus       222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll  250 (318)
T cd05570         222 EAKSILKSFLTKNPEKRLGCLPTGEQDIK  250 (318)
T ss_pred             HHHHHHHHHccCCHHHcCCCCCCCHHHHh
Confidence            67899999999999999998     6665

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.25  E-value=1.3e-11  Score=81.85  Aligned_cols=78  Identities=17%  Similarity=0.251  Sum_probs=51.4

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.++||||||++++++++|..|+.....    ...... ....     ..+.+..          +......+.+++.
T Consensus       194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~-~~~~-----~~~~~~~----------~~~~~~~~~~li~  253 (275)
T cd06608         194 SYDARSDVWSLGITAIELADGKPPLCDMHP----MRALFK-IPRN-----PPPTLKS----------PENWSKKFNDFIS  253 (275)
T ss_pred             CccccccHHHhHHHHHHHHhCCCCccccch----HHHHHH-hhcc-----CCCCCCc----------hhhcCHHHHHHHH
Confidence            467889999999999999999999853211    001100 0000     0011110          1134557889999


Q ss_pred             hccCCCccCCCCHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~  105 (127)
                      +||..+|.+|||+.+++.
T Consensus       254 ~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         254 ECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             HHhhcChhhCcCHHHHhc
Confidence            999999999999999874

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.25  E-value=1.7e-11  Score=83.26  Aligned_cols=104  Identities=14%  Similarity=0.178  Sum_probs=57.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-ccccccccccccCCCCcc---------
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDPILLNDGKGET---------   70 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---------   70 (127)
                      ||++.+..++.++|+||||++++++++|+.|+....  ...+..+....... ..............+...         
T Consensus       167 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (308)
T cd06615         167 PERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLD  244 (308)
T ss_pred             hhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHH
Confidence            677767778999999999999999999999975321  11111111100000 000000000000000000         


Q ss_pred             ------hhhhH-HHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           71 ------RINSR-LACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        71 ------~~~~~-~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                            ....+ ......+.+++.+||..+|.+||++.+++..
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         245 YIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence                  00000 0134568899999999999999999998854

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.25  E-value=1.5e-11  Score=80.73  Aligned_cols=83  Identities=18%  Similarity=0.229  Sum_probs=56.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||......++.++|+||+|++++++++|+.|+....     ..............     .+..            ....
T Consensus       172 pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~-----~~~~------------~~~~  229 (258)
T cd08215         172 PELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGEN-----LLELALKILKGQYP-----PIPS------------QYSS  229 (258)
T ss_pred             hhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCc-----HHHHHHHHhcCCCC-----CCCC------------CCCH
Confidence            566666778899999999999999999999975321     11122111111111     0110            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||..+|.+||++.+++.
T Consensus       230 ~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         230 ELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhc
Confidence            6788999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.25  E-value=2.7e-12  Score=91.77  Aligned_cols=82  Identities=13%  Similarity=0.156  Sum_probs=59.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.....+..+||||.||++|.++.|+.||+...     +.+    .+..  .+.-+..+..            ..+.
T Consensus       187 PEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----vke----ty~~--Ik~~~Y~~P~------------~ls~  243 (592)
T KOG0575|consen  187 PEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKE----TYNK--IKLNEYSMPS------------HLSA  243 (592)
T ss_pred             hhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----HHH----HHHH--HHhcCccccc------------ccCH
Confidence            789998999999999999999999999999987432     111    1110  1111111111            3445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+++...++.+|.+|||+.+|+.
T Consensus       244 ~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  244 EAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhc
Confidence            6678889999999999999999874

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.24  E-value=1.2e-11  Score=83.08  Aligned_cols=85  Identities=14%  Similarity=0.058  Sum_probs=55.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||++++|+++|+.||....  .......+........         ...        +.....
T Consensus       170 PE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~--~~~~~~~~~~~~~~~~---------~~~--------~~~~~~  230 (285)
T cd05605         170 PEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRK--EKVKREEVERRVKEDQ---------EEY--------SEKFSE  230 (285)
T ss_pred             cHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCc--hhhHHHHHHHHhhhcc---------ccc--------CcccCH
Confidence            677777888999999999999999999999986321  1111111111010000         000        113445


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      .+.+++..||..+|.+||     ++.+++
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~  259 (285)
T cd05605         231 AARSICRQLLTKDPGFRLGCRGEGAEEVK  259 (285)
T ss_pred             HHHHHHHHHccCCHHHhcCCCCCCHHHHh
Confidence            678999999999999999     666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.24  E-value=1.9e-11  Score=83.06  Aligned_cols=80  Identities=20%  Similarity=0.185  Sum_probs=52.3

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      .+.++.++||||||+++|++++|..|+.....     ............     +....           ......+.++
T Consensus       188 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~-----~~~~~-----------~~~~~~~~~l  246 (308)
T cd06634         188 EGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNES-----PALQS-----------GHWSEYFRNF  246 (308)
T ss_pred             cCCCCcccchHHHHHHHHHHHcCCCCCccccH-----HHHHHHHhhcCC-----CCcCc-----------ccccHHHHHH
Confidence            35678899999999999999999999753211     011110000000     01000           1334567889


Q ss_pred             hhhccCCCccCCCCHHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      +.+||+.+|.+||++.+++..
T Consensus       247 i~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         247 VDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHhhCCcccCCCHHHHhhC
Confidence            999999999999999988754

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.24  E-value=4e-12  Score=85.22  Aligned_cols=81  Identities=16%  Similarity=0.121  Sum_probs=53.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++||||||++++|+++|+.||....... ...........        ....          .+...+.
T Consensus       166 PE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~--------~~~~----------~~~~~~~  226 (280)
T cd05608         166 PELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILN--------DSVT----------YPDKFSP  226 (280)
T ss_pred             HHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcc--------cCCC----------CcccCCH
Confidence            677778889999999999999999999999986422110 00111110010        0000          0113445


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+..++..||+.+|.+||++
T Consensus       227 ~~~~li~~~l~~~P~~R~~~  246 (280)
T cd05608         227 ASKSFCEALLAKDPEKRLGF  246 (280)
T ss_pred             HHHHHHHHHhcCCHHHhcCC
Confidence            67889999999999999954

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.24  E-value=6.4e-12  Score=84.05  Aligned_cols=105  Identities=16%  Similarity=0.084  Sum_probs=55.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC------ccccccccccccCCCC-cchh
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD------HVVYIVDPILLNDGKG-ETRI   72 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~   72 (127)
                      ||++.+. .++.++|||||||++++|++|..|+.........+..........      ......+.......+. ....
T Consensus       168 PE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
T cd07839         168 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLV  247 (284)
T ss_pred             hHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhh
Confidence            5665554 468899999999999999999888543221111111110000000      0000000000000000 0000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .........+.+++.+||+.+|.+|||+.+++.
T Consensus       248 ~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~  280 (284)
T cd07839         248 NVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ  280 (284)
T ss_pred             hhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence            001123467789999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.24  E-value=2.4e-11  Score=80.31  Aligned_cols=83  Identities=16%  Similarity=0.144  Sum_probs=55.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||+.....++.++|+||||+++|++++|..|+....     ............     .+..            +.....
T Consensus       174 pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~-----~~~~------------~~~~~~  231 (260)
T cd08222         174 PEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIVEGP-----TPSL------------PETYSR  231 (260)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHcCC-----CCCC------------cchhcH
Confidence            455556667889999999999999999999875211     111111111110     1111            114455


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       232 ~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         232 QLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHhh
Confidence            7788999999999999999998864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.24  E-value=2.2e-11  Score=82.91  Aligned_cols=84  Identities=21%  Similarity=0.212  Sum_probs=54.5

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .+.++.++||||||++++++++|..|+....     .............     +.....           .
T Consensus       186 PE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~-----~~~~~~~~~~~~~-----~~~~~~-----------~  244 (313)
T cd06633         186 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNDS-----PTLQSN-----------E  244 (313)
T ss_pred             hhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcCC-----CCCCcc-----------c
Confidence            56652   4568889999999999999999999975321     1111111111100     000000           2


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+..++.+||+.+|.+||++.+++.
T Consensus       245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         245 WTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            2345778999999999999999999884

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.23  E-value=1.6e-11  Score=82.86  Aligned_cols=85  Identities=19%  Similarity=0.157  Sum_probs=56.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||+.....++.++||||||++++|+++|+.|+....  .......+....        .+.....          .....
T Consensus       187 PE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~--~~~~~~~~~~~~--------~~~~~~~----------~~~~~  246 (292)
T cd06658         187 PEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEP--PLQAMRRIRDNL--------PPRVKDS----------HKVSS  246 (292)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhcC--------CCccccc----------cccCH
Confidence            566666778999999999999999999999975321  111111111111        1111111          02334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||..+|.+||++.+++.
T Consensus       247 ~~~~li~~~l~~~P~~Rpt~~~il~  271 (292)
T cd06658         247 VLRGFLDLMLVREPSQRATAQELLQ  271 (292)
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhh
Confidence            6778899999999999999998875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=1.8e-11  Score=81.74  Aligned_cols=80  Identities=20%  Similarity=0.305  Sum_probs=51.8

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++|+||||+++|++++|+.|+....     .............     +.+..          +......+.+++
T Consensus       183 ~~~~~~sDi~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-----~~~~~----------~~~~~~~~~~li  242 (280)
T cd06611         183 NPYDYKADIWSLGITLIELAQMEPPHHELN-----PMRVLLKILKSEP-----PTLDQ----------PSKWSSSFNDFL  242 (280)
T ss_pred             CCCCccccHHHHHHHHHHHHhCCCCcccCC-----HHHHHHHHhcCCC-----CCcCC----------cccCCHHHHHHH
Confidence            446788999999999999999999975321     1111111111100     01100          012344678899


Q ss_pred             hhccCCCccCCCCHHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ..||..+|.+||++.+++..
T Consensus       243 ~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         243 KSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             HHHhccChhhCcCHHHHhcC
Confidence            99999999999999988743

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.23  E-value=1.7e-11  Score=82.88  Aligned_cols=86  Identities=17%  Similarity=0.133  Sum_probs=56.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++||||||++++|+++|+.|+....  .   ...........     .+....          ......
T Consensus       186 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~---~~~~~~~~~~~-----~~~~~~----------~~~~~~  245 (297)
T cd06659         186 PEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--P---VQAMKRLRDSP-----PPKLKN----------AHKISP  245 (297)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--H---HHHHHHHhccC-----CCCccc----------cCCCCH
Confidence            566777788999999999999999999999985321  1   11111100100     000000          002234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+.+++..||+.+|.+||++.+++..
T Consensus       246 ~l~~~i~~~l~~~P~~Rps~~~ll~~  271 (297)
T cd06659         246 VLRDFLERMLTREPQERATAQELLDH  271 (297)
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHhhC
Confidence            57789999999999999999998863

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.23  E-value=3.8e-12  Score=86.20  Aligned_cols=89  Identities=18%  Similarity=0.060  Sum_probs=58.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|+||||++++|+++|..|+....     ..........+.   ...+...            .....
T Consensus       185 PE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~-----~~~~~~~~~~~~---~~~~~~~------------~~~~~  244 (305)
T cd05609         185 PEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-----PEELFGQVISDD---IEWPEGD------------EALPA  244 (305)
T ss_pred             chhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcc---cCCCCcc------------ccCCH
Confidence            677777788999999999999999999999975321     111111111110   0001100            02345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      .+..++.+||+.+|.+||++..+.+.|+.
T Consensus       245 ~~~~li~~~l~~~P~~R~~~~~~~~ll~~  273 (305)
T cd05609         245 DAQDLISRLLRQNPLERLGTGGAFEVKQH  273 (305)
T ss_pred             HHHHHHHHHhccChhhccCccCHHHHHhC
Confidence            67899999999999999997666665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=1.5e-11  Score=84.39  Aligned_cols=91  Identities=12%  Similarity=0.094  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||+++||++|..||.....  ......+.. +.....   .+.....         ......
T Consensus       167 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~--~~~~~~i~~-~~~~~~---~~~~~~~---------~~~~s~  231 (333)
T cd05600         167 PEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP--NETWENLKY-WKETLQ---RPVYDDP---------RFNLSD  231 (333)
T ss_pred             hhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH--HHHHHHHHh-cccccc---CCCCCcc---------ccccCH
Confidence            7888888899999999999999999999999864221  111111110 010000   0000000         012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+..++.+|+..+|.+||++.+++..
T Consensus       232 ~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         232 EAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            67889999999999999999998843

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.23  E-value=1.8e-11  Score=85.87  Aligned_cols=105  Identities=10%  Similarity=-0.019  Sum_probs=58.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC--CCcHHHHHHhhcCCc--ccc-----c------cccccccC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG--DLNLHRFARMALPDH--VVY-----I------VDPILLND   65 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~-----~------~~~~~~~~   65 (127)
                      ||++....++.++|||||||+++||++|+.|+......  ...+...+.......  ...     .      ........
T Consensus       256 PE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  335 (392)
T PHA03207        256 PELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPP  335 (392)
T ss_pred             HhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCC
Confidence            67777788999999999999999999999998643211  111111111110000  000     0      00000000


Q ss_pred             CCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           66 GKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .... ..-........+..++..|+..+|.+||++.+++..
T Consensus       336 ~~~~-~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~  375 (392)
T PHA03207        336 YTIP-PVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL  375 (392)
T ss_pred             cccc-chhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence            0000 000000123456788899999999999999998754

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.23  E-value=4.8e-12  Score=86.03  Aligned_cols=84  Identities=20%  Similarity=0.228  Sum_probs=54.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||||+++|++++|+.|+.......    .+ ..        +..........        .....
T Consensus       201 PE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~----~~-~~--------~~~~~~~~~~~--------~~~~~  259 (316)
T cd05574         201 PEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDE----TF-SN--------ILKKEVTFPGS--------PPVSS  259 (316)
T ss_pred             HHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCchHH----HH-HH--------HhcCCccCCCc--------cccCH
Confidence            566666778889999999999999999999985322110    01 00        11111100000        02356


Q ss_pred             HHHHHhhhccCCCccCCCC----HHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN----ITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs----~~~v~~  105 (127)
                      .+..++.+||..+|.+||+    +.+++.
T Consensus       260 ~~~~li~~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         260 SARDLIRKLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence            7899999999999999999    555443

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.22  E-value=2.2e-11  Score=81.31  Aligned_cols=102  Identities=10%  Similarity=-0.031  Sum_probs=57.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcccc---------ccccccccCCCCcc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVY---------IVDPILLNDGKGET   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~   70 (127)
                      ||++.. +.++.++|||||||+++||++|..|+.....  .................         ........... ..
T Consensus       167 PE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  243 (282)
T cd07831         167 PECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKG-TG  243 (282)
T ss_pred             hhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhcccccccccCccccc-cc
Confidence            565443 4578899999999999999999998854221  11111111111110000         00000000000 00


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+..+.+++.+||+.+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  278 (282)
T cd07831         244 LRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR  278 (282)
T ss_pred             HHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence            00011234678899999999999999999998864

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.22  E-value=1.1e-11  Score=82.97  Aligned_cols=103  Identities=19%  Similarity=0.106  Sum_probs=54.8

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--C-c---ccccccc--ccccCCCCcch
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--D-H---VVYIVDP--ILLNDGKGETR   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~---~~~~~~~--~~~~~~~~~~~   71 (127)
                      ||++.+ ..++.++||||||++++++++|+.|+...... ............  . .   .....+.  ...... ....
T Consensus       170 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  247 (285)
T cd07861         170 PEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI-DQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWK-KGSL  247 (285)
T ss_pred             hHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhcchhhHHHHhhccccC-cchh
Confidence            565544 34688999999999999999999988632110 001111000000  0 0   0000000  000000 0000


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..........+.+++.+||..+|.+|||+.+++.
T Consensus       248 ~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         248 RSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN  281 (285)
T ss_pred             HHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence            0001123456678999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.22  E-value=8.6e-12  Score=88.74  Aligned_cols=100  Identities=16%  Similarity=0.064  Sum_probs=56.7

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----------ccccccccccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----------HVVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~   69 (127)
                      ||++.+ ..++.++|||||||+++||++|..||...... ..+...+......          ....+.-+.+....   
T Consensus       239 PE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~---  314 (440)
T PTZ00036        239 PELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKD---  314 (440)
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchh---
Confidence            666654 46899999999999999999999998643211 1111111100000          00000000000000   


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .....+......+.+++.+||..+|.+|||+.+++
T Consensus       315 l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l  349 (440)
T PTZ00036        315 LKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEAL  349 (440)
T ss_pred             HHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHh
Confidence            00000112345788999999999999999999987

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.22  E-value=2.2e-11  Score=81.50  Aligned_cols=103  Identities=13%  Similarity=0.104  Sum_probs=57.7

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---ccccc--ccccccc-----CCCC-
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYI--VDPILLN-----DGKG-   68 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~-----~~~~-   68 (127)
                      ||++... .++.++||||||++++++++|+.|+...... ..+.. ....+..   .....  .++....     .... 
T Consensus       170 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (288)
T cd07833         170 PELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDI-DQLYL-IQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPE  247 (288)
T ss_pred             CchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHHHhCCCCHHHhhhcccCccccccccCCCCCcH
Confidence            6777677 7889999999999999999999887632211 00100 0000000   00000  0000000     0000 


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......+...+..+.+++.+||..+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         248 SLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence            0000001123567899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.22  E-value=5.2e-12  Score=86.38  Aligned_cols=82  Identities=13%  Similarity=0.140  Sum_probs=56.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++|+++|+.||.....     ...........      ..+..            ....
T Consensus       164 PE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~~~~~~------~~~p~------------~~~~  220 (323)
T cd05595         164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----ERLFELILMEE------IRFPR------------TLSP  220 (323)
T ss_pred             cccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcCC------CCCCC------------CCCH
Confidence            7888888899999999999999999999999853211     11111111110      00111            2345


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++..||..+|.+|+     ++.+++.
T Consensus       221 ~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         221 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             HHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            678899999999999998     6777653

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.22  E-value=1.8e-11  Score=80.58  Aligned_cols=84  Identities=18%  Similarity=0.139  Sum_probs=54.7

Q ss_pred             CCcccCCC-CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSG-VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~-~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.... ++.++|+||||++++++++|+.|+....     -.............    +.+.            ....
T Consensus       170 pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~~----~~~~------------~~~~  228 (258)
T cd06632         170 PEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLE-----GVAAVFKIGRSKEL----PPIP------------DHLS  228 (258)
T ss_pred             HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCc-----HHHHHHHHHhcccC----CCcC------------CCcC
Confidence            45554555 8889999999999999999999986432     11111111110000    0011            1234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||+.+|.+||++.+++.
T Consensus       229 ~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         229 DEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            56688999999999999999998864

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.22  E-value=9.2e-12  Score=89.50  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=58.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++|+||+|++|++|++|+.|+.....+    .+...........                    ...+.
T Consensus       482 PEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~----~ei~~~i~~~~~s--------------------~~vS~  537 (612)
T KOG0603|consen  482 PEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG----IEIHTRIQMPKFS--------------------ECVSD  537 (612)
T ss_pred             hhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch----HHHHHhhcCCccc--------------------cccCH
Confidence            78888889999999999999999999999998754332    1111111111000                    13445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+++..|++.+|.+||++.++..
T Consensus       538 ~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  538 EAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHHHHHhccCChhhCcChhhhcc
Confidence            6678999999999999999998763

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.22  E-value=3.1e-12  Score=87.47  Aligned_cols=82  Identities=12%  Similarity=0.113  Sum_probs=56.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||+++||++|+.||....  ...+...+   ..+.      ....            .....
T Consensus       164 PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--~~~~~~~~---~~~~------~~~p------------~~~~~  220 (323)
T cd05571         164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD--HEKLFELI---LMEE------IRFP------------RTLSP  220 (323)
T ss_pred             hhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC--HHHHHHHH---HcCC------CCCC------------CCCCH
Confidence            678888889999999999999999999999985321  11111111   1110      0011            12345


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++..||..+|.+||     ++.+++.
T Consensus       221 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         221 EAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             HHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            678899999999999999     6777763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.22  E-value=1.1e-11  Score=84.93  Aligned_cols=83  Identities=16%  Similarity=0.227  Sum_probs=54.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC---CCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG---DLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.+..++.++||||||++++|+++|+.||......   ......++.........     .+.            ..
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~p------------~~  227 (329)
T cd05618         165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-----RIP------------RS  227 (329)
T ss_pred             HHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCC-----CCC------------CC
Confidence            67777888899999999999999999999998632111   11112222211111000     011            13


Q ss_pred             HHHHHHHHhhhccCCCccCCCCH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~  100 (127)
                      ....+..++.+||+.+|.+||+.
T Consensus       228 ~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         228 LSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             CCHHHHHHHHHHhcCCHHHcCCC
Confidence            34567889999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.21  E-value=6.3e-12  Score=95.00  Aligned_cols=81  Identities=17%  Similarity=0.233  Sum_probs=53.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||+++||+++..|+....   ..+......        ...+...             ....
T Consensus       184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~--------~~~~~~~-------------~~~~  239 (793)
T PLN00181        184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHR--------VLPPQIL-------------LNWP  239 (793)
T ss_pred             hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHh--------hcChhhh-------------hcCH
Confidence            788888899999999999999999999887754210   001011000        0011000             1122


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....++..||+.+|.+||++.+++.
T Consensus       240 ~~~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        240 KEASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHHHHHhCCCChhhCcChHHHhh
Confidence            3457778899999999999999874

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.21  E-value=6.5e-12  Score=85.86  Aligned_cols=82  Identities=18%  Similarity=0.115  Sum_probs=55.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++||||||++++||++|+.||....     ..........+.      ..+.            .....
T Consensus       169 PE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~-----~~~~~~~~~~~~------~~~~------------~~~~~  225 (323)
T cd05584         169 PEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAEN-----RKKTIDKILKGK------LNLP------------PYLTP  225 (323)
T ss_pred             hhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC------CCCC------------CCCCH
Confidence            777777888999999999999999999999986321     111111111110      0010            12334


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||     +..+++.
T Consensus       226 ~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         226 EARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             HHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            678899999999999999     6666553

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.21  E-value=1.2e-11  Score=82.83  Aligned_cols=104  Identities=18%  Similarity=0.148  Sum_probs=55.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHh--hcCCccccccc------cccccCCCC-cc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARM--ALPDHVVYIVD------PILLNDGKG-ET   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~~-~~   70 (127)
                      ||++.+ ..++.++||||||++++|+++|+.|+..... ..........  ..........+      ......... ..
T Consensus       169 PE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (286)
T cd07846         169 PELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSD-IDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEP  247 (286)
T ss_pred             cHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCch-HHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcch
Confidence            565544 3467889999999999999999988753211 0000000000  00000000000      000000000 00


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...........+.+++.+||..+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         248 LEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence            00011134567889999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.21  E-value=3.6e-11  Score=83.26  Aligned_cols=34  Identities=26%  Similarity=0.255  Sum_probs=31.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++|||||||++|+|++|+.||..
T Consensus       191 PE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~  224 (359)
T cd07876         191 PEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG  224 (359)
T ss_pred             chhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence            7888888899999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.20  E-value=2.2e-11  Score=81.85  Aligned_cols=82  Identities=13%  Similarity=0.056  Sum_probs=53.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|+||||++++++++|..||.....  ......+........ .    ...            .....
T Consensus       170 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~--~~~~~~~~~~~~~~~-~----~~~------------~~~~~  230 (285)
T cd05632         170 PEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE--KVKREEVDRRVLETE-E----VYS------------AKFSE  230 (285)
T ss_pred             hHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhhhccc-c----ccC------------ccCCH
Confidence            6777788899999999999999999999999863211  001111111111000 0    000            02334


Q ss_pred             HHHHHhhhccCCCccCCCCHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT  101 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~  101 (127)
                      .+.+++..||+.+|.+||++.
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~  251 (285)
T cd05632         231 EAKSICKMLLTKDPKQRLGCQ  251 (285)
T ss_pred             HHHHHHHHHccCCHhHcCCCc
Confidence            668899999999999999943

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.20  E-value=1.2e-11  Score=85.42  Aligned_cols=34  Identities=32%  Similarity=0.288  Sum_probs=30.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++|||||||++++|++|+.||..
T Consensus       187 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  220 (355)
T cd07874         187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            6777777899999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.20  E-value=1.4e-11  Score=82.40  Aligned_cols=103  Identities=19%  Similarity=0.102  Sum_probs=56.0

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC-C-c----ccccccc--ccccCCCCcch
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-D-H----VVYIVDP--ILLNDGKGETR   71 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~----~~~~~~~--~~~~~~~~~~~   71 (127)
                      ||++.++ .++.++|+||||+++|++++|+.||..... ...+....+.... . .    .....+.  ........ ..
T Consensus       168 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  245 (283)
T cd07835         168 PEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE-IDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQ-DL  245 (283)
T ss_pred             CceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCChHHhhhhhhchhhhhhccccccc-ch
Confidence            6766554 468899999999999999999998753211 0111111111000 0 0    0000000  00000000 00


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..........+.+++.+||+.+|.+||++.+++.
T Consensus       246 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~  279 (283)
T cd07835         246 SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ  279 (283)
T ss_pred             hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            0001122356789999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.20  E-value=2.6e-11  Score=85.13  Aligned_cols=33  Identities=27%  Similarity=0.262  Sum_probs=29.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTD   33 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~   33 (127)
                      ||++..+.++.++|||||||++||+++|..|+.
T Consensus       252 PE~~~~~~~~~~~DiwSlGvil~elltg~~p~~  284 (391)
T PHA03212        252 PELLARDPYGPAVDIWSAGIVLFEMATCHDSLF  284 (391)
T ss_pred             hhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence            788888889999999999999999999998764

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.20  E-value=4.9e-12  Score=92.66  Aligned_cols=85  Identities=18%  Similarity=0.214  Sum_probs=59.9

Q ss_pred             CCcccCC--CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGS--GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~--~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++-.|  .|..++|||||||.+.||.||+.||-........+       +.-...+ +.|.            .|...
T Consensus       745 PEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAM-------FkVGmyK-vHP~------------iPeel  804 (1226)
T KOG4279|consen  745 PEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAM-------FKVGMYK-VHPP------------IPEEL  804 (1226)
T ss_pred             hHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhh-------hhhccee-cCCC------------CcHHH
Confidence            5655444  58899999999999999999999986433222111       0001111 1111            34477


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....+++++|+.++|.+||++.+++.
T Consensus       805 saeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  805 SAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             HHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            888999999999999999999999874

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.20  E-value=2.3e-11  Score=82.60  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=28.8

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+ ..++.++||||||++++||++|+.||..
T Consensus       184 PE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~  218 (317)
T cd07867         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             cHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence            676655 4578999999999999999999999864

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.20  E-value=1.8e-11  Score=80.90  Aligned_cols=90  Identities=16%  Similarity=0.113  Sum_probs=57.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||||++++++++|..|+.....     ............ . .....            ......
T Consensus       162 pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~-~-~~~~~------------~~~~~~  222 (260)
T cd05611         162 PETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILSRRI-N-WPEEV------------KEFCSP  222 (260)
T ss_pred             hhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhccc-C-CCCcc------------cccCCH
Confidence            5666667788999999999999999999999853211     111111111000 0 00000            012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      .+.+++..||+.+|.+||++..+.+.|..
T Consensus       223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~~  251 (260)
T cd05611         223 EAVDLINRLLCMDPAKRLGANGYQEIKSH  251 (260)
T ss_pred             HHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence            77899999999999999988766555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.19  E-value=8.4e-12  Score=85.34  Aligned_cols=77  Identities=14%  Similarity=0.056  Sum_probs=52.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++||+++|+.||....     ............      ....            .....
T Consensus       170 PE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~-----~~~~~~~i~~~~------~~~p------------~~~~~  226 (324)
T cd05589         170 PEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDD-----EEEVFDSIVNDE------VRYP------------RFLSR  226 (324)
T ss_pred             HhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC------CCCC------------CCCCH
Confidence            677778889999999999999999999999986321     111111111110      0000            02345


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++.+||..+|.+||+.
T Consensus       227 ~~~~li~~~L~~dP~~R~~~  246 (324)
T cd05589         227 EAISIMRRLLRRNPERRLGS  246 (324)
T ss_pred             HHHHHHHHHhhcCHhHcCCC
Confidence            66889999999999999953

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.19  E-value=1.9e-11  Score=83.78  Aligned_cols=82  Identities=16%  Similarity=0.218  Sum_probs=53.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC---CCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG---DLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.+..++.++|+|||||+++++++|+.||+.....   ......+..........     .+.            ..
T Consensus       165 PE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p------------~~  227 (329)
T cd05588         165 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQI-----RIP------------RS  227 (329)
T ss_pred             HHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCC-----CCC------------CC
Confidence            67777788999999999999999999999998642211   11111222211111000     011            12


Q ss_pred             HHHHHHHHhhhccCCCccCCCC
Q 042057           78 CVNSMVRIGVACSMESPQDRMN   99 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs   99 (127)
                      ....+..++..|++.+|.+|++
T Consensus       228 ~~~~~~~li~~~L~~dP~~R~~  249 (329)
T cd05588         228 LSVKASSVLKGFLNKDPKERLG  249 (329)
T ss_pred             CCHHHHHHHHHHhccCHHHcCC
Confidence            3346788999999999999997

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.19  E-value=2.5e-11  Score=82.03  Aligned_cols=103  Identities=13%  Similarity=0.021  Sum_probs=54.0

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc---CCc-cccc-----ccc-ccccCCCC-
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL---PDH-VVYI-----VDP-ILLNDGKG-   68 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~-----~~~-~~~~~~~~-   68 (127)
                      ||.+.+. .++.++||||||++++|+++|..|+.....  ......+....   +.. ....     .+. ........ 
T Consensus       192 PE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (310)
T cd07865         192 PELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTE--QHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRK  269 (310)
T ss_pred             cHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchh
Confidence            5655443 367899999999999999999988753221  11111111110   000 0000     000 00000000 


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......+......+.+++..||..+|.+||++.+++.
T Consensus       270 ~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         270 VKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             hHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence            0000000011245678999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.19  E-value=5.7e-12  Score=86.39  Aligned_cols=81  Identities=16%  Similarity=0.086  Sum_probs=54.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||+++||++|..||....     ..........+..      .+..            ....
T Consensus       184 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~------~~p~------------~~~~  240 (329)
T PTZ00263        184 PEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT-----PFRIYEKILAGRL------KFPN------------WFDG  240 (329)
T ss_pred             HHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCC-----HHHHHHHHhcCCc------CCCC------------CCCH
Confidence            677777888999999999999999999999985321     1111111111100      0000            1234


Q ss_pred             HHHHHhhhccCCCccCCCC-----HHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-----ITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-----~~~v~  104 (127)
                      .+.+++..||+.+|.+||+     +.+++
T Consensus       241 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll  269 (329)
T PTZ00263        241 RARDLVKGLLQTDHTKRLGTLKGGVADVK  269 (329)
T ss_pred             HHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            5678999999999999997     45554

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.18  E-value=7.8e-11  Score=78.10  Aligned_cols=87  Identities=20%  Similarity=0.227  Sum_probs=56.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|+||+|++++++++|..|+......  .............    ..+    .        .+.....
T Consensus       177 PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~----~~~----~--------~~~~~~~  238 (268)
T cd06630         177 PEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASAT----TAP----S--------IPEHLSP  238 (268)
T ss_pred             HhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccC----CCC----C--------CchhhCH
Confidence            56666677889999999999999999999997532211  1111111000000    000    0        1113456


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..|+..+|.+||++.+++.
T Consensus       239 ~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         239 GLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHhc
Confidence            7788999999999999999998863

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=99.18  E-value=5.2e-11  Score=87.99  Aligned_cols=85  Identities=16%  Similarity=0.166  Sum_probs=64.1

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      .+..++.|+|||++||+||-++.+..||+...                 ...++...-.-..        .+.....+..
T Consensus       231 sg~pI~eKsDIWALGclLYkLCy~t~PFe~sg-----------------~laIlng~Y~~P~--------~p~ys~~l~~  285 (738)
T KOG1989|consen  231 SGLPIGEKSDIWALGCLLYKLCYFTTPFEESG-----------------KLAILNGNYSFPP--------FPNYSDRLKD  285 (738)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc-----------------ceeEEeccccCCC--------CccHHHHHHH
Confidence            44568999999999999999999999987421                 1222222211111        1267788999


Q ss_pred             HhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           85 IGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      |+..||+.+|.+||++-+|+..+..+....
T Consensus       286 LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~  315 (738)
T KOG1989|consen  286 LIRTMLQPNPDERPNIYQVLEEIFELANKP  315 (738)
T ss_pred             HHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence            999999999999999999999998886654

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.18  E-value=2.3e-11  Score=81.37  Aligned_cols=103  Identities=16%  Similarity=0.106  Sum_probs=55.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---cccccccc-----ccccCCCCc--
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVDP-----ILLNDGKGE--   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~~~--   69 (127)
                      ||++.+ ..++.++||||||++++++++|+.||....... .+.... .....   ......+.     .+....+..  
T Consensus       169 PE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07847         169 PELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD-QLYLIR-KTLGDLIPRHQQIFSTNQFFKGLSIPEPETRE  246 (286)
T ss_pred             HHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHH-HHhCCCChHHhhhcccccccccccCCCccccc
Confidence            455444 457889999999999999999999986432111 111111 00000   00000000     000000000  


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++.+||+.+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         247 PLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE  282 (286)
T ss_pred             CHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence            000001123457889999999999999999998764

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.18  E-value=2e-11  Score=81.00  Aligned_cols=83  Identities=16%  Similarity=0.166  Sum_probs=54.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++||+++|+.|+....    ....... ......    .+.            .+.....
T Consensus       178 PE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~----~~~~~~~-~~~~~~----~~~------------~~~~~~~  236 (265)
T cd06652         178 PEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFE----AMAAIFK-IATQPT----NPV------------LPPHVSD  236 (265)
T ss_pred             hhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccc----hHHHHHH-HhcCCC----CCC------------CchhhCH
Confidence            676767778899999999999999999999975321    1111111 000000    000            1123445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++.+|+. +|.+||++.+++.
T Consensus       237 ~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         237 HCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             HHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            66778888885 8999999998764

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.18  E-value=7.5e-12  Score=84.35  Aligned_cols=81  Identities=15%  Similarity=-0.009  Sum_probs=54.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.|+....     ..........+.      ..+            +.....
T Consensus       167 PE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~------~~~------------~~~~~~  223 (291)
T cd05612         167 PEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDN-----PFGIYEKILAGK------LEF------------PRHLDL  223 (291)
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC------cCC------------CccCCH
Confidence            677777778999999999999999999999985321     111111111110      000            012234


Q ss_pred             HHHHHhhhccCCCccCCCC-----HHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-----ITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-----~~~v~  104 (127)
                      .+.+++.+||..+|.+||+     +.+++
T Consensus       224 ~~~~li~~~l~~dp~~R~~~~~~~~~~~l  252 (291)
T cd05612         224 YAKDLIKKLLVVDRTRRLGNMKNGADDVK  252 (291)
T ss_pred             HHHHHHHHHcCCCHHHccCCccCCHHHHh
Confidence            6788999999999999995     66665

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.18  E-value=3e-11  Score=83.78  Aligned_cols=34  Identities=29%  Similarity=0.237  Sum_probs=30.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||++++|++|+.||..
T Consensus       194 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  227 (364)
T cd07875         194 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG  227 (364)
T ss_pred             HHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence            6777778899999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.18  E-value=6.2e-12  Score=84.40  Aligned_cols=96  Identities=17%  Similarity=0.078  Sum_probs=60.6

Q ss_pred             CCcccCCC--CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSG--VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~--~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.++.  .+.++||||||++++|+++|..|+...... .............      .+..            +...
T Consensus       175 PE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~-~~~~~~~~~~~~~------~~~~------------~~~~  235 (288)
T cd05583         175 PEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ-NSQSEISRRILKS------KPPF------------PKTM  235 (288)
T ss_pred             HHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc-chHHHHHHHHHcc------CCCC------------Cccc
Confidence            44444443  678899999999999999999997532111 1111111111111      0000            0123


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ...+.+++.+||+.+|.+|||+.++...|+....+..
T Consensus       236 ~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         236 SAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             CHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            3467889999999999999999988888876654443

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.18  E-value=1e-11  Score=85.13  Aligned_cols=82  Identities=11%  Similarity=0.123  Sum_probs=56.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++++++|+.||....     ............      ..+.            .....
T Consensus       164 PE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~-----~~~~~~~~~~~~------~~~p------------~~~~~  220 (328)
T cd05593         164 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMED------IKFP------------RTLSA  220 (328)
T ss_pred             hhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCC-----HHHHHHHhccCC------ccCC------------CCCCH
Confidence            788888889999999999999999999999985321     111111111110      0011            12345


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+..++.+|+..+|.+|+     ++.+++.
T Consensus       221 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         221 DAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             HHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            678899999999999997     7777764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.17  E-value=5.1e-11  Score=82.60  Aligned_cols=32  Identities=25%  Similarity=0.306  Sum_probs=28.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPT   32 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~   32 (127)
                      ||++.+..++.++|||||||++||++++..++
T Consensus       225 PE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~  256 (357)
T PHA03209        225 PEVLARDKYNSKADIWSAGIVLFEMLAYPSTI  256 (357)
T ss_pred             CeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence            78888888999999999999999999865554

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.17  E-value=3.6e-11  Score=89.49  Aligned_cols=86  Identities=15%  Similarity=0.067  Sum_probs=57.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||++||+++|+.||....     ...++........   ..+..            ......
T Consensus       549 PE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~-----~~~~~~~il~~~~---~~p~~------------~~~~~~  608 (669)
T cd05610         549 PELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDET-----PQQVFQNILNRDI---PWPEG------------EEKLSV  608 (669)
T ss_pred             HHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhcCC---CCCcc------------cccCCH
Confidence            677888889999999999999999999999985321     1122221111100   00000            002234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+..++..||..+|.+||++.+++..
T Consensus       609 ~~~~~l~~lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         609 NAQNAIEILLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HHHHHHHHHcccChhHCcCHHHHHhC
Confidence            56778888999999999999998753

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.17  E-value=4.5e-11  Score=78.95  Aligned_cols=84  Identities=17%  Similarity=0.107  Sum_probs=55.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++|+||||++++++++|..|+......   ...........     ..+..            +.....
T Consensus       168 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~-----~~~~~------------~~~~~~  227 (258)
T cd05578         168 PEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQET-----ADVLY------------PATWST  227 (258)
T ss_pred             HHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhcc-----ccccC------------cccCcH
Confidence            56666677899999999999999999999998643211   11111111110     00001            112346


Q ss_pred             HHHHHhhhccCCCccCCCCH--HHHH
Q 042057           81 SMVRIGVACSMESPQDRMNI--TNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~--~~v~  104 (127)
                      .+.+++.+||+.+|.+||++  .++.
T Consensus       228 ~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         228 EAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             HHHHHHHHHccCChhHcCCccHHHHh
Confidence            77899999999999999999  5543

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.17  E-value=7.5e-12  Score=85.47  Aligned_cols=81  Identities=20%  Similarity=0.167  Sum_probs=54.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++|||||||++||+++|+.||.....     ...........        ..  .+.        ....
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~~~~i~~~~--------~~--~p~--------~~~~  221 (321)
T cd05591         165 PEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDLFESILHDD--------VL--YPV--------WLSK  221 (321)
T ss_pred             HHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCC--------CC--CCC--------CCCH
Confidence            5677777889999999999999999999999864221     11111111110        00  000        2234


Q ss_pred             HHHHHhhhccCCCccCCC-------CHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-------NITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-------s~~~v~  104 (127)
                      .+.+++..|+..+|.+||       ++.+++
T Consensus       222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~  252 (321)
T cd05591         222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIK  252 (321)
T ss_pred             HHHHHHHHHhccCHHHcCCCCCCCCCHHHHh
Confidence            678899999999999999       566555

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.17  E-value=3.8e-11  Score=80.35  Aligned_cols=103  Identities=19%  Similarity=0.092  Sum_probs=54.6

Q ss_pred             CCcccCCC-CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC--cc----ccccc--cccccCCCCcch
Q 042057            1 VEYGLGSG-VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD--HV----VYIVD--PILLNDGKGETR   71 (127)
Q Consensus         1 pE~~~~~~-~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~--~~~~~~~~~~~~   71 (127)
                      ||++.+.. ++.++||||||++++|+++|+.|+...... ..+..........  ..    .....  ........ ...
T Consensus       169 PE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  246 (284)
T cd07860         169 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI-DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWAR-QDF  246 (284)
T ss_pred             CeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccc-cCH
Confidence            56555433 588899999999999999999987532110 0111111100000  00    00000  00000000 000


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..........+.+++.+||+.+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         247 SKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA  280 (284)
T ss_pred             HHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence            0001123345678999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.17  E-value=3.5e-11  Score=80.87  Aligned_cols=86  Identities=14%  Similarity=0.094  Sum_probs=55.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++||||||++++++++|+.||.......  ...........     .......            ....
T Consensus       170 PE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~--~~~~~~~~~~~-----~~~~~~~------------~~~~  230 (285)
T cd05630         170 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI--KREEVERLVKE-----VQEEYSE------------KFSP  230 (285)
T ss_pred             hHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc--hHHHHHhhhhh-----hhhhcCc------------cCCH
Confidence            677777889999999999999999999999986421110  00001100000     0000000            2334


Q ss_pred             HHHHHhhhccCCCccCCCC-----HHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-----ITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-----~~~v~~  105 (127)
                      .+.+++..||+.+|.+||+     +.+++.
T Consensus       231 ~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         231 DARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            5788999999999999999     666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.17  E-value=1e-11  Score=84.72  Aligned_cols=78  Identities=21%  Similarity=0.178  Sum_probs=53.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||+++||++|+.||.....     ..........      .+.+.            .....
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~-----~~~~~~i~~~------~~~~~------------~~~~~  221 (316)
T cd05592         165 PEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE-----DELFDSILND------RPHFP------------RWISK  221 (316)
T ss_pred             HHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcC------CCCCC------------CCCCH
Confidence            6777778899999999999999999999999863221     1111111111      00010            12334


Q ss_pred             HHHHHhhhccCCCccCCCCHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT  101 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~  101 (127)
                      .+.+++..||+.+|.+||++.
T Consensus       222 ~~~~ll~~~l~~~P~~R~~~~  242 (316)
T cd05592         222 EAKDCLSKLFERDPTKRLGVD  242 (316)
T ss_pred             HHHHHHHHHccCCHHHcCCCh
Confidence            567899999999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.16  E-value=9.1e-12  Score=85.10  Aligned_cols=77  Identities=21%  Similarity=0.140  Sum_probs=52.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|||||||++||+++|+.||....     ..........+..      ...            .....
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~------~~~------------~~~~~  221 (320)
T cd05590         165 PEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILNDEV------VYP------------TWLSQ  221 (320)
T ss_pred             HHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCCC------CCC------------CCCCH
Confidence            677777788999999999999999999999986422     1111111111100      000            02234


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++..|++.+|.+||++
T Consensus       222 ~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         222 DAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             HHHHHHHHHcccCHHHCCCC
Confidence            66889999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.16  E-value=1e-11  Score=84.88  Aligned_cols=77  Identities=18%  Similarity=0.164  Sum_probs=52.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||++|||++|+.||....  ...+...+   ....      .....            ....
T Consensus       170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~--~~~~~~~i---~~~~------~~~~~------------~~~~  226 (324)
T cd05587         170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED--EDELFQSI---MEHN------VSYPK------------SLSK  226 (324)
T ss_pred             hhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHHHH---HcCC------CCCCC------------CCCH
Confidence            788888889999999999999999999999986321  11111111   1110      00000            2334


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++.+|+..+|.+|++.
T Consensus       227 ~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         227 EAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             HHHHHHHHHhhcCHHHcCCC
Confidence            66789999999999999986

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.16  E-value=8.2e-12  Score=85.34  Aligned_cols=77  Identities=18%  Similarity=0.155  Sum_probs=53.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|||||||++|||++|+.||.....  ..+...+   ....        ..  .        +.....
T Consensus       170 PE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~i---~~~~--------~~--~--------p~~~s~  226 (323)
T cd05616         170 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSI---MEHN--------VA--Y--------PKSMSK  226 (323)
T ss_pred             HHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHHH---HhCC--------CC--C--------CCcCCH
Confidence            6788888899999999999999999999999864221  1111111   1110        00  0        012345


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+..++.+|++.+|.+|++.
T Consensus       227 ~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         227 EAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             HHHHHHHHHcccCHHhcCCC
Confidence            67889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.16  E-value=3.3e-11  Score=82.60  Aligned_cols=83  Identities=16%  Similarity=0.254  Sum_probs=53.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC-CCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG-DLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||+++||++|+.||...... .................     .+            +....
T Consensus       165 PE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----~~------------p~~~~  227 (327)
T cd05617         165 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPI-----RI------------PRFLS  227 (327)
T ss_pred             HHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCC-----CC------------CCCCC
Confidence            67777888999999999999999999999998643211 11111222111111000     00            01233


Q ss_pred             HHHHHHhhhccCCCccCCCCH
Q 042057           80 NSMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~  100 (127)
                      ..+..++.+|+..+|.+|+++
T Consensus       228 ~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         228 VKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             HHHHHHHHHHhccCHHHcCCC
Confidence            456789999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.15  E-value=1.3e-11  Score=81.42  Aligned_cols=87  Identities=17%  Similarity=0.185  Sum_probs=56.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||+......+.++||||||++++++++|..|+....     .............    ..  ...          .....
T Consensus       170 Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~~~~~~~~~~----~~--~~~----------~~~~~  228 (265)
T cd05579         170 PEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEIFQNILNGKI----EW--PED----------VEVSD  228 (265)
T ss_pred             HHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCCc----CC--Ccc----------ccCCH
Confidence            455566667889999999999999999999986322     1111111111100    00  000          01245


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      .+..++..||+.+|.+||++..+.+.|+
T Consensus       229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l~  256 (265)
T cd05579         229 EAIDLISKLLVPDPEKRLGAKSIEEIKN  256 (265)
T ss_pred             HHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence            6789999999999999999966665554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.15  E-value=1.1e-11  Score=84.54  Aligned_cols=81  Identities=25%  Similarity=0.288  Sum_probs=54.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||++||+++|+.||....  ...+...+.   ..      .+...            .....
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~--~~~~~~~i~---~~------~~~~~------------~~~~~  221 (316)
T cd05619         165 PEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD--EEELFQSIR---MD------NPCYP------------RWLTR  221 (316)
T ss_pred             HHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCC--HHHHHHHHH---hC------CCCCC------------ccCCH
Confidence            677777889999999999999999999999986321  111111111   00      00000            02234


Q ss_pred             HHHHHhhhccCCCccCCCCHH-HHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT-NVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~-~v~  104 (127)
                      .+.+++.+||+.+|.+||++. ++.
T Consensus       222 ~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         222 EAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             HHHHHHHHHhccCHhhcCCChHHHH
Confidence            567899999999999999986 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.15  E-value=3.4e-11  Score=81.52  Aligned_cols=105  Identities=16%  Similarity=0.109  Sum_probs=55.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--C-cccc-----cccc-ccccCCCCc-
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--D-HVVY-----IVDP-ILLNDGKGE-   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-----~~~~-~~~~~~~~~-   69 (127)
                      ||.+.+ ..++.++||||+||++++|++|..||.........+.........  . .+..     ...+ ......+.. 
T Consensus       172 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  251 (303)
T cd07869         172 PDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNL  251 (303)
T ss_pred             hHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccH
Confidence            565544 457889999999999999999999986432111111111110000  0 0000     0000 000000000 


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++..|++.+|.+|||+.+++.
T Consensus       252 ~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         252 RQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence            000000011245678999999999999999998874

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.15  E-value=5.6e-11  Score=78.67  Aligned_cols=80  Identities=20%  Similarity=0.087  Sum_probs=52.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|+||||++++++++|..|+.....+   ...........        ......+        .....
T Consensus       161 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~--------~~~~~~~--------~~~~~  221 (262)
T cd05572         161 PEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEIYNDILKG--------NGKLEFP--------NYIDK  221 (262)
T ss_pred             hhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHHHHHHhcc--------CCCCCCC--------cccCH
Confidence            56666777899999999999999999999998643211   11111111110        0000111        12345


Q ss_pred             HHHHHhhhccCCCccCCCC
Q 042057           81 SMVRIGVACSMESPQDRMN   99 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs   99 (127)
                      .+..++..||+.+|.+||+
T Consensus       222 ~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         222 AAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             HHHHHHHHHccCChhhCcC
Confidence            7899999999999999999

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.15  E-value=1.7e-11  Score=80.82  Aligned_cols=89  Identities=16%  Similarity=0.153  Sum_probs=56.5

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+. +..++.++||||+|+++++|++|..|+....  ...............    .......          .....
T Consensus       167 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~--~~~~~~~~~~~~~~~----~~~~~~~----------~~~~~  230 (260)
T PF00069_consen  167 PEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN--SDDQLEIIEKILKRP----LPSSSQQ----------SREKS  230 (260)
T ss_dssp             HHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS--HHHHHHHHHHHHHTH----HHHHTTS----------HTTSH
T ss_pred             ccccccccccccccccccccccccccccccccccccc--chhhhhhhhhccccc----ccccccc----------cchhH
Confidence            56665 6788999999999999999999999986431  000111111111000    0000000          00113


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++..||+.+|.+||++.+++.
T Consensus       231 ~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  231 EELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            68899999999999999999998864

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.15  E-value=2.1e-11  Score=84.86  Aligned_cols=102  Identities=10%  Similarity=0.032  Sum_probs=55.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-ccc----------cccccccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVV----------YIVDPILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------~~~~~~~~~~~~~   68 (127)
                      ||.+.+ ..++.++|||||||+++||++|+.||......  .....+...... ...          ..+.... ...+.
T Consensus       173 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~  249 (372)
T cd07853         173 PEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDLLGTPSLEAMRSACEGARAHILRGP-HKPPS  249 (372)
T ss_pred             HHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCC-CCCCc
Confidence            455544 34788999999999999999999998643211  001111100000 000          0000000 00000


Q ss_pred             -cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 -ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 -~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       .............+.+++.+|++.+|.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         250 LPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             hHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence             0000000122456789999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.15  E-value=9e-11  Score=78.42  Aligned_cols=102  Identities=13%  Similarity=0.024  Sum_probs=54.9

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--------C--ccccccccccccCCCCc
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--------D--HVVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~--~~~~~~~~~~~~~~~~~   69 (127)
                      ||.+. ...++.++|+||||++++|+++|+.|+....... .+ ........        +  .........+.......
T Consensus       167 PE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T cd07830         167 PEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QL-YKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTS  244 (283)
T ss_pred             ceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HH-HHHHHhcCCCChhhhhhHhhhhcccccccccccccc
Confidence            55543 3457889999999999999999998875321100 00 00000000        0  00000111111000000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ...........+..++.+||+.+|.+||++.+++.
T Consensus       245 -~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  279 (283)
T cd07830         245 -LHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ  279 (283)
T ss_pred             -HHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence             00000012356889999999999999999998864

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.14  E-value=9.8e-12  Score=85.58  Aligned_cols=83  Identities=17%  Similarity=0.168  Sum_probs=55.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--CccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--DHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+..++.++|||||||+++||++|+.||....     ..........  ...      ......          ..
T Consensus       199 PE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~~~------~~p~~~----------~~  257 (350)
T cd05573         199 PEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDT-----LQETYNKIINWKESL------RFPPDP----------PV  257 (350)
T ss_pred             HHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCC-----HHHHHHHHhccCCcc------cCCCCC----------CC
Confidence            677777889999999999999999999999986432     1111111111  100      000000          12


Q ss_pred             HHHHHHHhhhccCCCccCCCC-HHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMN-ITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs-~~~v~~  105 (127)
                      ...+..++..|+. +|.+||+ +.+++.
T Consensus       258 ~~~~~~li~~ll~-dp~~R~~s~~~ll~  284 (350)
T cd05573         258 SPEAIDLICRLLC-DPEDRLGSFEEIKS  284 (350)
T ss_pred             CHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence            4566788889997 9999999 998875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.14  E-value=4e-11  Score=80.09  Aligned_cols=103  Identities=14%  Similarity=-0.037  Sum_probs=56.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccccccc----cccccCCCCc-c
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVD----PILLNDGKGE-T   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~~~~~~~~-~   70 (127)
                      ||.+.+ ..++.++||||||++++|+++|+.|+......  .....+......    .+....+    .......... .
T Consensus       170 PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (287)
T cd07840         170 PELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL--EQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRR  247 (287)
T ss_pred             ceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCchhhccccccchhhhhccccccchhH
Confidence            565443 35788999999999999999999998643211  111111111000    0000000    0000000000 0


Q ss_pred             hhhhHHH-HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLA-CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~-~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....... ....+.+++.+||..+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         248 LREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            0000011 2567889999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.14  E-value=7.1e-11  Score=80.33  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=29.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+ ..++.++||||+||+++|+++|+.||..
T Consensus       184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         184 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             CHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence            676655 4588999999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.14  E-value=9.7e-11  Score=80.07  Aligned_cols=102  Identities=13%  Similarity=0.028  Sum_probs=58.2

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC------------ccccccccccccCCC
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD------------HVVYIVDPILLNDGK   67 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~   67 (127)
                      ||.+.+. .++.++|+||||++++++++|+.||......  .....+......            .....+.. ..... 
T Consensus       175 PE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-  250 (330)
T cd07834         175 PELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLKFITSEKARNYLKS-LPKKP-  250 (330)
T ss_pred             ceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhhhccccchhhHHhh-cccCC-
Confidence            5666666 7889999999999999999999998643211  111111111100            00000000 00000 


Q ss_pred             CcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           68 GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        68 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ..............+.+++.+||+.+|.+||++.+++..
T Consensus       251 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~  289 (330)
T cd07834         251 KKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH  289 (330)
T ss_pred             cchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence            000000011234567899999999999999999998853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.14  E-value=1.5e-11  Score=83.95  Aligned_cols=81  Identities=22%  Similarity=0.186  Sum_probs=54.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||+++|+++|+.||....  ...+...+.   ..      .+....            ....
T Consensus       165 PE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~--~~~~~~~~~---~~------~~~~~~------------~~~~  221 (316)
T cd05620         165 PEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD--EDELFESIR---VD------TPHYPR------------WITK  221 (316)
T ss_pred             HHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC--HHHHHHHHH---hC------CCCCCC------------CCCH
Confidence            677778889999999999999999999999986322  111111111   00      011100            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHH-HHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT-NVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~-~v~  104 (127)
                      .+.+++..||..+|.+||++. ++.
T Consensus       222 ~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         222 ESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             HHHHHHHHHccCCHHHcCCChHHHH
Confidence            667899999999999999974 443

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.14  E-value=7e-12  Score=85.68  Aligned_cols=78  Identities=14%  Similarity=-0.039  Sum_probs=54.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++||++|+.||....     ............      ..+..            ....
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~------~~~~~------------~~~~  221 (323)
T cd05575         165 PEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----TAEMYDNILNKP------LRLKP------------NISV  221 (323)
T ss_pred             hhhhcCCCCCccccccccchhhhhhhcCCCCCCCCC-----HHHHHHHHHcCC------CCCCC------------CCCH
Confidence            788888889999999999999999999999985321     111111111110      00100            2244


Q ss_pred             HHHHHhhhccCCCccCCCCHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT  101 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~  101 (127)
                      .+.+++.+|++.+|.+||++.
T Consensus       222 ~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         222 SARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             HHHHHHHHHhhcCHHhCCCCC
Confidence            678899999999999999975

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.14  E-value=4.3e-11  Score=82.41  Aligned_cols=109  Identities=15%  Similarity=-0.004  Sum_probs=58.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc---ccccccccc-------ccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH---VVYIVDPIL-------LNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-------~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||++++|+++|+.||.....  ..............   +.+......       ....+..
T Consensus       183 PE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (342)
T cd07879         183 PEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDY--LDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRK  260 (342)
T ss_pred             hhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccc
Confidence            566655 4578899999999999999999999863211  00111111100000   000000000       0000000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH--HHHhH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE--LQSVK  111 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~--L~~~~  111 (127)
                      ............+.+++.+||+.+|.+||++.+++..  ++...
T Consensus       261 ~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~  304 (342)
T cd07879         261 DFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFR  304 (342)
T ss_pred             hHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcc
Confidence            0000001223467899999999999999999999843  54443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.14  E-value=9.1e-11  Score=79.21  Aligned_cols=85  Identities=20%  Similarity=0.171  Sum_probs=55.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++.++|+||||++++++++|..|+....  ............+.        .+...          .....
T Consensus       185 pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~--~~~~~~~~~~~~~~--------~~~~~----------~~~~~  244 (292)
T cd06657         185 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPP--------KLKNL----------HKVSP  244 (292)
T ss_pred             HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHhhCCc--------ccCCc----------ccCCH
Confidence            566666778899999999999999999999975311  11111111111111        10000          02234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++.+||..+|.+||++.+++.
T Consensus       245 ~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         245 SLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHHhCCcccCcCHHHHhc
Confidence            5678899999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.13  E-value=1.4e-10  Score=80.22  Aligned_cols=34  Identities=29%  Similarity=0.246  Sum_probs=30.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++||||||++++++++|+.||..
T Consensus       186 PE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~  219 (353)
T cd07850         186 PEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG  219 (353)
T ss_pred             HHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence            6777777889999999999999999999998853

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.13  E-value=5e-11  Score=91.01  Aligned_cols=83  Identities=14%  Similarity=0.118  Sum_probs=55.2

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+..  ..++.++|||||||++|||++|+.||....    .+..++......       +.+...           ..
T Consensus       210 PEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~----~~~qli~~lk~~-------p~lpi~-----------~~  267 (1021)
T PTZ00266        210 PELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKAN----NFSQLISELKRG-------PDLPIK-----------GK  267 (1021)
T ss_pred             HHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCC----cHHHHHHHHhcC-------CCCCcC-----------CC
Confidence            566543  457899999999999999999999985321    122222111111       011000           12


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+..++..||..+|.+||++.+++.
T Consensus       268 S~eL~dLI~~~L~~dPeeRPSa~QlL~  294 (1021)
T PTZ00266        268 SKELNILIKNLLNLSAKERPSALQCLG  294 (1021)
T ss_pred             CHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence            346788999999999999999999873

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.13  E-value=3.8e-11  Score=77.92  Aligned_cols=86  Identities=20%  Similarity=0.225  Sum_probs=55.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|||+||++++++++|..|+....    ................ ...   .           .....
T Consensus       155 pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~----~~~~~~~~~~~~~~~~-~~~---~-----------~~~~~  215 (244)
T smart00220      155 PEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD----QLLELFKKIGKPKPPF-PPP---E-----------WKISP  215 (244)
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC----cHHHHHHHHhccCCCC-ccc---c-----------ccCCH
Confidence            556666778889999999999999999999975321    1111111111110000 000   0           00345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||..+|.+||++.+++.
T Consensus       216 ~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      216 EAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHHccCCchhccCHHHHhh
Confidence            7888999999999999999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.13  E-value=4.4e-11  Score=79.39  Aligned_cols=80  Identities=21%  Similarity=0.228  Sum_probs=57.3

Q ss_pred             CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhhcc
Q 042057           11 TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACS   90 (127)
Q Consensus        11 ~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   90 (127)
                      .++|+|||+|++||+.|+..||.+...-+..             .++.-..+....|        +.....+..++.-|.
T Consensus       368 raadmwsfaillwel~trevpfadlspmecg-------------mkialeglrv~ip--------pgis~hm~klm~icm  426 (448)
T KOG0195|consen  368 RAADMWSFAILLWELNTREVPFADLSPMECG-------------MKIALEGLRVHIP--------PGISRHMNKLMNICM  426 (448)
T ss_pred             hhhhHHHHHHHHHHhhccccccccCCchhhh-------------hhhhhccccccCC--------CCccHHHHHHHHHHh
Confidence            5689999999999999999998764422111             1111122222222        244567788999999


Q ss_pred             CCCccCCCCHHHHHHHHHHhH
Q 042057           91 MESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        91 ~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+|.+||.|..++-+|+++.
T Consensus       427 nedpgkrpkfdmivpilekm~  447 (448)
T KOG0195|consen  427 NEDPGKRPKFDMIVPILEKMI  447 (448)
T ss_pred             cCCCCcCCCcceehhhHHHhc
Confidence            999999999999999998763

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.12  E-value=8.6e-11  Score=78.77  Aligned_cols=85  Identities=18%  Similarity=0.180  Sum_probs=54.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.... ..++.++||||||++++++++|..||........  .........      ....+            +....
T Consensus       164 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~------~~~~~------------~~~~~  223 (279)
T cd05633         164 PEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTLT------VNVEL------------PDSFS  223 (279)
T ss_pred             HHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH--HHHHHHhhc------CCcCC------------ccccC
Confidence            555543 4578999999999999999999999864321111  111000000      01111            11344


Q ss_pred             HHHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      ..+..++..|+..+|.+||     ++.+++.
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~  254 (279)
T cd05633         224 PELKSLLEGLLQRDVSKRLGCLGRGAQEVKE  254 (279)
T ss_pred             HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHh
Confidence            5678899999999999999     4776654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.12  E-value=5.3e-11  Score=81.74  Aligned_cols=104  Identities=13%  Similarity=0.045  Sum_probs=56.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccccccccccc---cCCCCcch-
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVDPILL---NDGKGETR-   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~---~~~~~~~~-   71 (127)
                      ||.+.. ..++.++||||||+++++|++|+.||.....  ......+...+..    ....+......   ...+.... 
T Consensus       178 PE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (336)
T cd07849         178 PEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKV  255 (336)
T ss_pred             hHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcc
Confidence            555433 4578899999999999999999999853211  0011111111110    00000000000   00000000 


Q ss_pred             --hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           72 --INSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        72 --~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                        ..........+.+++.+||+.+|.+||++.+++..
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         256 PWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             cHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence              00001234568899999999999999999998764

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.12  E-value=6.2e-11  Score=79.66  Aligned_cols=101  Identities=16%  Similarity=0.123  Sum_probs=55.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--------------CccccccccccccC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--------------DHVVYIVDPILLND   65 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~   65 (127)
                      ||.+.+ ..++.++||||||++++|+++|+.||.........+... +....              ..............
T Consensus       172 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (291)
T cd07870         172 PDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKI-WTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQ  250 (291)
T ss_pred             CceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHH-HHHcCCCChhhhhhhhhcccccchhccccCCcc
Confidence            566554 347888999999999999999999986432211111111 00000              00000000000000


Q ss_pred             CCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           66 GKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .   ............+.+++.+|+..+|.+|||+.+++.
T Consensus       251 ~---~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         251 L---RVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             h---hhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence            0   000000011346678999999999999999998763

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.12  E-value=1.1e-10  Score=78.85  Aligned_cols=102  Identities=12%  Similarity=-0.025  Sum_probs=55.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----------ccccccccccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----------HVVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||++++|+++|+.|+......  .....+......          ..............+. 
T Consensus       195 PE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  271 (311)
T cd07866         195 PELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI--DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPR-  271 (311)
T ss_pred             hHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCc-
Confidence            455443 34788999999999999999999887532211  111111110000          0000000011111100 


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++.+|+..+|.+|||+.+++.
T Consensus       272 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         272 TLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             cHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            000000112356789999999999999999988764

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.11  E-value=1.4e-10  Score=79.52  Aligned_cols=102  Identities=12%  Similarity=0.033  Sum_probs=56.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcccccc----ccc-------cccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIV----DPI-------LLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~   68 (127)
                      ||.+.. ..++.++||||||++++|+++|+.||......  .....+............    ...       ..... .
T Consensus       180 PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  256 (334)
T cd07855         180 PELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQ-P  256 (334)
T ss_pred             hHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCC-C
Confidence            455443 45788999999999999999999998642210  001111110000000000    000       00000 0


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .............+.+++.+||+.+|.+||++.+++.
T Consensus       257 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         257 VPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             CCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            0000001123567899999999999999999998775

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.11  E-value=8e-11  Score=80.67  Aligned_cols=85  Identities=21%  Similarity=0.226  Sum_probs=53.1

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+. .++.++|||||||+++|+++|+.||........ ..........      .++.+..            ...
T Consensus       175 PE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~------~~~~~~~------------~~~  235 (332)
T cd05614         175 PEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILK------CDPPFPS------------FIG  235 (332)
T ss_pred             HHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhc------CCCCCCC------------CCC
Confidence            5666544 478899999999999999999999863221111 1111111111      0111111            233


Q ss_pred             HHHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      ..+.+++.+||+.+|.+||     ++.+++
T Consensus       236 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l  265 (332)
T cd05614         236 PEAQDLLHKLLRKDPKKRLGAGPQGASEIK  265 (332)
T ss_pred             HHHHHHHHHHcCCCHHHcCCCCCCCHHHHH
Confidence            4668899999999999999     555655

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.11  E-value=9.2e-11  Score=80.63  Aligned_cols=103  Identities=15%  Similarity=0.067  Sum_probs=56.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccccccccc-------cccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVDPI-------LLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~   68 (127)
                      ||.+.. ..++.++||||||++++++++|+.|+.....  .............    ......+..       +... +.
T Consensus       177 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  253 (337)
T cd07858         177 PELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY--VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYT-PR  253 (337)
T ss_pred             hHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcc-cc
Confidence            454443 4688999999999999999999999853211  0111111110000    000000000       0000 00


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .............+.+++.+||+.+|.+||++.+++..
T Consensus       254 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         254 QSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             cCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence            00000111345667899999999999999999998854

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.11  E-value=1.4e-10  Score=76.13  Aligned_cols=83  Identities=22%  Similarity=0.271  Sum_probs=55.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||+.....++.++|||++|++++++++|..|+....    ........ ....     .+.+.            .....
T Consensus       168 pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~----~~~~~~~~-~~~~-----~~~~~------------~~~~~  225 (254)
T cd06627         168 PEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLN----PMAALFRI-VQDD-----HPPLP------------EGISP  225 (254)
T ss_pred             HhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCcc----HHHHHHHH-hccC-----CCCCC------------CCCCH
Confidence            566666667889999999999999999999975321    11111111 0010     01111            12345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++.+|+..+|.+||++.+++.
T Consensus       226 ~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         226 ELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHHHHhCChhhCcCHHHHhc
Confidence            6789999999999999999998763

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.11  E-value=1.1e-10  Score=77.92  Aligned_cols=102  Identities=18%  Similarity=0.020  Sum_probs=55.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cc---ccc--cccccccCCCCcc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HV---VYI--VDPILLNDGKGET   70 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~--~~~~~~~~~~~~~   70 (127)
                      ||.+... .++.++||||||++++|+++|+.|+......  .....+......    .+   ...  .+..... .....
T Consensus       167 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  243 (282)
T cd07829         167 PEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI--DQLFKIFQILGTPTEESWPGVTKLPDYKPTFPK-FPPKD  243 (282)
T ss_pred             hHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH--HHHHHHHHHhCCCcHHHHHhhcccccccccccc-cCccc
Confidence            5555555 7888999999999999999998887532110  000000000000    00   000  0000000 00000


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....+.....+.+++..||..+|.+||++.+++.
T Consensus       244 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK  278 (282)
T ss_pred             hHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence            00001122457899999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.11  E-value=1.4e-10  Score=78.03  Aligned_cols=95  Identities=17%  Similarity=0.054  Sum_probs=54.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC-----------C-------ccccccccc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-----------D-------HVVYIVDPI   61 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-------~~~~~~~~~   61 (127)
                      ||.+.+. .++.++|+||||++++++++|..|+.....  ......+.....           .       .........
T Consensus       175 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (293)
T cd07843         175 PELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE--IDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQ  252 (293)
T ss_pred             chhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchh
Confidence            5655443 368899999999999999999998763221  111111100000           0       000000000


Q ss_pred             cccCCCCcchhhhHHH-HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           62 LLNDGKGETRINSRLA-CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        62 ~~~~~~~~~~~~~~~~-~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +....+        .. ....+.+++..||+.+|.+||++.+++.
T Consensus       253 ~~~~~~--------~~~~~~~~~~li~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         253 LRKKFP--------ALSLSDNGFDLLNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             hhcccc--------ccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence            000000        01 2456788999999999999999999874

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.11  E-value=6e-11  Score=81.71  Aligned_cols=103  Identities=15%  Similarity=0.141  Sum_probs=54.8

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-------ccccccccccccCCCCc--c
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-------HVVYIVDPILLNDGKGE--T   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~--~   70 (127)
                      ||.+.. ..++.++|||||||+++++++|+.|+....... ........ .+-       .........+.......  .
T Consensus       187 PE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (342)
T cd07854         187 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRP  264 (342)
T ss_pred             HHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCC
Confidence            454433 457789999999999999999999986432100 00000000 000       00000000000000000  0


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...........+.+++..|+..+|.+||++.+++.
T Consensus       265 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         265 LRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence            00001123456788999999999999999999873

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.10  E-value=6e-12  Score=85.80  Aligned_cols=79  Identities=19%  Similarity=0.148  Sum_probs=53.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|||||||+++||++|+.||....     .............      .+.            .....
T Consensus       167 PE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~-----~~~~~~~i~~~~~------~~p------------~~~~~  223 (318)
T cd05582         167 PEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKD-----RKETMTMILKAKL------GMP------------QFLSP  223 (318)
T ss_pred             HHHHcCCCCCCccceeccceEeeeeccCCCCCCCCC-----HHHHHHHHHcCCC------CCC------------CCCCH
Confidence            566777778999999999999999999999986321     1111111111100      010            12345


Q ss_pred             HHHHHhhhccCCCccCCCCHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITN  102 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~  102 (127)
                      .+..++..||+.+|.+||++.+
T Consensus       224 ~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         224 EAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             HHHHHHHHHhhcCHhHcCCCCC
Confidence            6788999999999999999554

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.10  E-value=1.6e-10  Score=77.85  Aligned_cols=103  Identities=13%  Similarity=0.017  Sum_probs=54.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cc---ccccccccccCCCCcchh
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HV---VYIVDPILLNDGKGETRI   72 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~   72 (127)
                      ||.+.+ ..++.++|+||||++++|+++|..++....  ..............    .+   ............+.....
T Consensus       171 PE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (298)
T cd07841         171 PELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS--DIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLK  248 (298)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCc--cHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchh
Confidence            454433 456889999999999999999976654321  11111111100000    00   000000000000000000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .........+.+++.+||+.+|.+||++.+++.
T Consensus       249 ~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~  281 (298)
T cd07841         249 QIFPAASDDALDLLQRLLTLNPNKRITARQALE  281 (298)
T ss_pred             hhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            011133567889999999999999999999886

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.10  E-value=1.5e-10  Score=77.49  Aligned_cols=85  Identities=16%  Similarity=0.148  Sum_probs=54.9

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+ .++.++||||||++++++++|+.|+........  ........      .....+.            ....
T Consensus       164 PE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~--~~~~~~~~------~~~~~~~------------~~~s  223 (278)
T cd05606         164 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HEIDRMTL------TMAVELP------------DSFS  223 (278)
T ss_pred             cHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccch--HHHHHHhh------ccCCCCC------------CcCC
Confidence            5666544 588999999999999999999999864321111  00000000      0011111            1234


Q ss_pred             HHHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      ..+.+++.+|+..+|.+||     ++.++..
T Consensus       224 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         224 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            5678899999999999999     8888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.10  E-value=6.3e-11  Score=79.16  Aligned_cols=83  Identities=17%  Similarity=0.084  Sum_probs=53.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|+||||++++++++|+.|+....... ............      ....            +.....
T Consensus       163 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~------~~~~------------~~~~~~  223 (277)
T cd05577         163 PEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKV-EKEELKRRTLEM------AVEY------------PDKFSP  223 (277)
T ss_pred             HHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccc-cHHHHHhccccc------cccC------------CccCCH
Confidence            677777778999999999999999999999985322100 000000000000      0000            112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITN  102 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~  102 (127)
                      .+.+++.+||+.+|.+||++.+
T Consensus       224 ~~~~li~~~l~~~p~~R~~~~~  245 (277)
T cd05577         224 EAKDLCEALLQKDPEKRLGCRG  245 (277)
T ss_pred             HHHHHHHHHccCChhHccCCCc
Confidence            6789999999999999995544

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.10  E-value=8e-11  Score=79.16  Aligned_cols=104  Identities=13%  Similarity=-0.023  Sum_probs=55.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---ccccccccccccCCCCc---chhh
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVDPILLNDGKGE---TRIN   73 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~~~~   73 (127)
                      ||++.+ ..++.++|+||||++++++++|..|+..... ..............   .+............+..   ....
T Consensus       180 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (295)
T cd07837         180 PEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSE-LQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSR  258 (295)
T ss_pred             hHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCH-HHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHH
Confidence            565544 3578899999999999999999988753211 00011111100000   00000000000000000   0000


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+.+++.+||..+|.+||++.+++.
T Consensus       259 ~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~  290 (295)
T cd07837         259 AVPDLSPEGLDLLQKMLRYDPAKRISAKAALT  290 (295)
T ss_pred             hccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            01123456789999999999999999998764

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.10  E-value=1.1e-10  Score=80.20  Aligned_cols=102  Identities=14%  Similarity=0.057  Sum_probs=55.5

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC------------ccccccccccccCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD------------HVVYIVDPILLNDGK   67 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~   67 (127)
                      ||.+.. ..++.++||||||++++++++|+.|+.......  ...........            ....+++ .+.....
T Consensus       181 PE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  257 (337)
T cd07852         181 PEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN--QLEKIIEVIGPPSAEDIESIKSPFAATMLD-SLPSRPR  257 (337)
T ss_pred             ceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCCHHHHHHHHhhhHHHhhh-hcccccc
Confidence            454433 457889999999999999999999875321100  00000000000            0000000 0000000


Q ss_pred             CcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           68 GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        68 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                       .............+.+++..||+.+|.+||++.+++..
T Consensus       258 -~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         258 -KPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             -cchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence             00000001134567899999999999999999998853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.10  E-value=8.1e-11  Score=89.36  Aligned_cols=93  Identities=20%  Similarity=0.269  Sum_probs=60.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||+++||++|+.|+.......  .   ..   ..   ....+.-...         ....+.
T Consensus       200 PE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~k--i---~~---~~---~i~~P~~~~p---------~~~iP~  259 (932)
T PRK13184        200 PERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGRK--I---SY---RD---VILSPIEVAP---------YREIPP  259 (932)
T ss_pred             HHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhh--h---hh---hh---hccChhhccc---------cccCCH
Confidence            677777888999999999999999999999985421100  0   00   00   0000000000         012334


Q ss_pred             HHHHHhhhccCCCccCCCC-HHHHHHHHHHhHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-ITNVVHELQSVKNI  113 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-~~~v~~~L~~~~~~  113 (127)
                      .+..++.+|++.+|.+||+ +.++...|+.....
T Consensus       260 ~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~  293 (932)
T PRK13184        260 FLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG  293 (932)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence            6778999999999999965 67777778776553

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.10  E-value=1.5e-10  Score=77.76  Aligned_cols=34  Identities=26%  Similarity=0.293  Sum_probs=27.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+ ..++.++||||||+++|+|++|+.|+..
T Consensus       172 PE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~  206 (291)
T cd07844         172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPG  206 (291)
T ss_pred             cHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            565544 4578899999999999999999999853

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.10  E-value=7e-11  Score=79.49  Aligned_cols=99  Identities=15%  Similarity=0.051  Sum_probs=56.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccc---------cccccccccCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVV---------YIVDPILLNDG   66 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------~~~~~~~~~~~   66 (127)
                      ||.+.+ ..++.++||||+||+++++++|+.||......  ............    .+.         ....+......
T Consensus       172 PE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (288)
T cd07871         172 PDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVK--EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQP  249 (288)
T ss_pred             hHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCc
Confidence            666654 46889999999999999999999998542211  111111100000    000         00000000000


Q ss_pred             CCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           67 KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                          .............+++.+|+..+|.+|||+.+++.
T Consensus       250 ----~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         250 ----LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR  284 (288)
T ss_pred             ----hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence                00000122346789999999999999999998863

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.09  E-value=2.2e-10  Score=78.88  Aligned_cols=34  Identities=21%  Similarity=0.159  Sum_probs=28.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+ ..++.++|||||||++++|++|+.||..
T Consensus       184 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  218 (343)
T cd07878         184 PEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG  218 (343)
T ss_pred             chHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence            676655 4688999999999999999999999853

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.08  E-value=1.1e-10  Score=80.13  Aligned_cols=104  Identities=13%  Similarity=0.042  Sum_probs=57.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCC----------cHHHHHHhhcCCccccccccccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL----------NLHRFARMALPDHVVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (127)
                      ||++.+ ..++.++||||||++++++++|+.|+........          ...++......+...+.+.. +....+. 
T Consensus       174 PE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-  251 (328)
T cd07856         174 PEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS-LPKREPV-  251 (328)
T ss_pred             ceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhh-ccccCCC-
Confidence            666555 4688999999999999999999988753221000          00001110000000000000 0000000 


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ............+.+++.+|++.+|.+||++.+++..
T Consensus       252 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~  288 (328)
T cd07856         252 PFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH  288 (328)
T ss_pred             cHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence            0000011234678899999999999999999988743

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.08  E-value=1.3e-11  Score=84.41  Aligned_cols=80  Identities=15%  Similarity=0.009  Sum_probs=53.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||++++|++|+.||....     .............      ...            .....
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~~------~~~------------~~~~~  221 (325)
T cd05602         165 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNKPL------QLK------------PNITN  221 (325)
T ss_pred             HHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCC-----HHHHHHHHHhCCc------CCC------------CCCCH
Confidence            677777889999999999999999999999986321     1111111111100      000            02334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNV  103 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v  103 (127)
                      .+..++..|++.+|.+||+..+.
T Consensus       222 ~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         222 SARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             HHHHHHHHHcccCHHHCCCCCCC
Confidence            56788999999999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.08  E-value=9.2e-11  Score=79.29  Aligned_cols=102  Identities=14%  Similarity=0.019  Sum_probs=55.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC----Ccccccccc------ccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP----DHVVYIVDP------ILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||+++++|++|+.||......  .....+.....    ..+......      ........ 
T Consensus       173 PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  249 (301)
T cd07873         173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRAD-  249 (301)
T ss_pred             cHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhccccccccccCccccc-
Confidence            454433 34778899999999999999999998643211  11111111000    001111000      00000000 


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++.+|+..+|.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~  285 (301)
T cd07873         250 CLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK  285 (301)
T ss_pred             cHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            000001123446788999999999999999998874

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.08  E-value=2.9e-11  Score=81.95  Aligned_cols=35  Identities=20%  Similarity=0.189  Sum_probs=28.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCcc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVM   35 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~   35 (127)
                      ||++.+ ..++.++||||||++++++++|+.|+...
T Consensus       184 PE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~  219 (316)
T cd07842         184 PELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR  219 (316)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence            454444 35788999999999999999999998643

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.08  E-value=1.7e-10  Score=80.88  Aligned_cols=84  Identities=13%  Similarity=0.070  Sum_probs=62.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+-.|..++||||+||+++||++-+.+|...+     +...+.+...+.    ..     .        .+.....
T Consensus       175 PEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~~~~----~~-----P--------lp~~ys~  232 (426)
T KOG0589|consen  175 PEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKINRGL----YS-----P--------LPSMYSS  232 (426)
T ss_pred             HHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHhhcc----CC-----C--------CCccccH
Confidence            677888899999999999999999999999986422     222332222221    11     1        1225567


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+..++..|++.+|..||++.+++..
T Consensus       233 el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  233 ELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             HHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            88899999999999999999999977

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.08  E-value=7.9e-12  Score=85.48  Aligned_cols=82  Identities=11%  Similarity=0.120  Sum_probs=55.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++|+++|+.||....     ............      ..+..            ....
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~~~  221 (325)
T cd05594         165 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEE------IRFPR------------TLSP  221 (325)
T ss_pred             HHHHccCCCCCccccccccceeeeeccCCCCCCCCC-----HHHHHHHHhcCC------CCCCC------------CCCH
Confidence            677777889999999999999999999999985321     111111111110      00100            2334


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+..++.+|++.+|.+|+     ++.+++.
T Consensus       222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             HHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            678899999999999996     7887763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.08  E-value=1.3e-10  Score=76.23  Aligned_cols=74  Identities=16%  Similarity=0.057  Sum_probs=51.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||....+.++.++|+||+|++++|+++|..++.....               .........+            +.....
T Consensus       151 PE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~---------------~~~~~~~~~~------------~~~~~~  203 (237)
T cd05576         151 PEVGGISEETEACDWWSLGAILFELLTGKTLVECHPS---------------GINTHTTLNI------------PEWVSE  203 (237)
T ss_pred             CcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCch---------------hcccccccCC------------cccCCH
Confidence            6777777889999999999999999999977542110               0000000011            112345


Q ss_pred             HHHHHhhhccCCCccCCCCHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT  101 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~  101 (127)
                      .+..++.+|++.+|.+||++.
T Consensus       204 ~~~~li~~~l~~dp~~R~~~~  224 (237)
T cd05576         204 EARSLLQQLLQFNPTERLGAG  224 (237)
T ss_pred             HHHHHHHHHccCCHHHhcCCC
Confidence            678899999999999999974

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.08  E-value=1.6e-10  Score=78.38  Aligned_cols=102  Identities=17%  Similarity=0.070  Sum_probs=56.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccccccc------cccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVD------PILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~------~~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||++++++++|+.||...... ..+....+ ....    .+..+..      .......+. 
T Consensus       173 PE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  249 (309)
T cd07872         173 PDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFR-LLGTPTEETWPGISSNDEFKNYNFPKYKPQ-  249 (309)
T ss_pred             CHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-HhCCCCHHHHhhhcchhhhhhhhcCccCCC-
Confidence            565544 45788999999999999999999998643211 11111111 0000    0000000      000000000 


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..............+++.+|+..+|.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         250 PLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK  285 (309)
T ss_pred             chhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence            000011123456789999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.07  E-value=1.2e-10  Score=77.94  Aligned_cols=103  Identities=11%  Similarity=0.032  Sum_probs=55.0

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc----c---cccccc-cccc-CCCCcc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH----V---VYIVDP-ILLN-DGKGET   70 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~-~~~~-~~~~~~   70 (127)
                      ||.+.+. .++.++||||+|++++|+++|..++....  .......+.......    +   ....+. .+.. ......
T Consensus       169 PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (286)
T cd07832         169 PELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEN--DIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIP  246 (286)
T ss_pred             ceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCC--HHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcch
Confidence            5665443 46889999999999999999976664321  111111111111100    0   000000 0000 000000


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...........+.+++.+|+..+|.+||++.+++.
T Consensus       247 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         247 LEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            00000123467889999999999999999998864

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.07  E-value=1.1e-10  Score=77.99  Aligned_cols=104  Identities=17%  Similarity=0.066  Sum_probs=56.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc-C--Cccccccc-cccccCCCCc---chh
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL-P--DHVVYIVD-PILLNDGKGE---TRI   72 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~-~~~~~~~~~~---~~~   72 (127)
                      ||++.+ ..++.++|+||||++++++++|+.|+......+ .......... +  ..+..... +......+..   ...
T Consensus       169 PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (284)
T cd07836         169 PDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQ  247 (284)
T ss_pred             hHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHH
Confidence            555544 346889999999999999999999986432111 0111110000 0  00000000 0000000000   000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .........+.+++..|++.+|.+||++.+++.
T Consensus       248 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  280 (284)
T cd07836         248 QLFPHADPLGIDLLHRLLQLNPELRISAHDALQ  280 (284)
T ss_pred             HHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            011123456789999999999999999998864

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.07  E-value=1.2e-11  Score=84.57  Aligned_cols=79  Identities=15%  Similarity=0.064  Sum_probs=53.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++|||||||+++||++|+.||....     .............  .+.+                ....
T Consensus       165 PE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~~~~~~~~~~~~~--~~~~----------------~~~~  221 (325)
T cd05604         165 PEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----VAEMYDNILHKPL--VLRP----------------GASL  221 (325)
T ss_pred             HHHHcCCCCCCcCccccccceehhhhcCCCCCCCCC-----HHHHHHHHHcCCc--cCCC----------------CCCH
Confidence            677778889999999999999999999999986321     1111111111100  0001                2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITN  102 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~  102 (127)
                      .+..++..|+..+|.+||++.+
T Consensus       222 ~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         222 TAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             HHHHHHHHHhccCHHhcCCCCC
Confidence            5678899999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.06  E-value=1.9e-10  Score=83.12  Aligned_cols=33  Identities=30%  Similarity=0.483  Sum_probs=28.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCC-CCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKK-PTD   33 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~-~~~   33 (127)
                      ||++.+..++.++|||||||++|||++|.. |+.
T Consensus       337 PE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~  370 (501)
T PHA03210        337 PEILAGDGYCEITDIWSCGLILLDMLSHDFCPIG  370 (501)
T ss_pred             chhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence            788888889999999999999999999764 443

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.06  E-value=3.4e-10  Score=76.80  Aligned_cols=102  Identities=16%  Similarity=0.060  Sum_probs=55.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---cc-cccc------ccccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HV-VYIV------DPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~------~~~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||+|+++||+++|+.|+.....  ......+......   .. ....      ...+... +..
T Consensus       177 PE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  253 (309)
T cd07845         177 PELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE--IEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQ-PYN  253 (309)
T ss_pred             hhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCChhhchhhhcccccccccccCC-CCC
Confidence            566544 4578999999999999999999998863211  1111111111100   00 0000      0000000 000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++..|++.+|.+||++.+++.
T Consensus       254 ~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~  289 (309)
T cd07845         254 NLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE  289 (309)
T ss_pred             chHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            000000012456778999999999999999998874

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.06  E-value=1.4e-10  Score=76.96  Aligned_cols=83  Identities=17%  Similarity=0.114  Sum_probs=54.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|+||||++++++++|+.|+....    .... +.........    +.+            +.....
T Consensus       178 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~-~~~~~~~~~~----~~~------------p~~~~~  236 (264)
T cd06653         178 PEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYE----AMAA-IFKIATQPTK----PML------------PDGVSD  236 (264)
T ss_pred             HhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccC----HHHH-HHHHHcCCCC----CCC------------CcccCH
Confidence            566777778899999999999999999999985321    1111 1111110000    001            114456


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||. +|..||+..+++.
T Consensus       237 ~~~~~i~~~l~-~~~~r~~~~~~~~  260 (264)
T cd06653         237 ACRDFLKQIFV-EEKRRPTAEFLLR  260 (264)
T ss_pred             HHHHHHHHHhc-CcccCccHHHHhc
Confidence            78899999999 5799999987653

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.05  E-value=1.5e-10  Score=79.79  Aligned_cols=101  Identities=11%  Similarity=0.003  Sum_probs=54.7

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcccc------------ccccccccCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVY------------IVDPILLNDGK   67 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~   67 (127)
                      ||.+.. ..++.++||||||++++++++|+.|+.....  .................            .+........+
T Consensus       184 PE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (343)
T cd07851         184 PEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDH--IDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKK  261 (343)
T ss_pred             HHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCC
Confidence            344433 3578899999999999999999999863211  00000000000000000            00000000000


Q ss_pred             CcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           68 GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        68 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                        ............+.+++.+|++.+|.+|||+.+++.
T Consensus       262 --~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~  297 (343)
T cd07851         262 --DFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA  297 (343)
T ss_pred             --CHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence              000001122457889999999999999999999864

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.05  E-value=1.9e-10  Score=77.45  Aligned_cols=103  Identities=18%  Similarity=0.023  Sum_probs=55.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccc-------cccccc-cCCCCcch
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYI-------VDPILL-NDGKGETR   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~   71 (127)
                      ||++.+ ..++.++||||||++++++++|+.|+...... ..+..... .+.......       .+.... ........
T Consensus       172 PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (294)
T PLN00009        172 PEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFR-ILGTPNEETWPGVTSLPDYKSAFPKWPPKDL  249 (294)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HhCCCChhhccccccchhhhhhcccCCCCCH
Confidence            555544 35788999999999999999999998642110 01111110 000000000       000000 00000000


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..........+.+++.+|++.+|.+||++.+++.
T Consensus       250 ~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        250 ATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE  283 (294)
T ss_pred             HHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence            0000123455788999999999999999998875

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.05  E-value=4.5e-11  Score=81.79  Aligned_cols=77  Identities=19%  Similarity=0.191  Sum_probs=52.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||++||+++|+.||.....     ...........        .  ..        +.....
T Consensus       170 PE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~i~~~~--------~--~~--------p~~~~~  226 (323)
T cd05615         170 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DELFQSIMEHN--------V--SY--------PKSLSK  226 (323)
T ss_pred             HHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCC--------C--CC--------CccCCH
Confidence            6777778889999999999999999999999864321     11111111110        0  00        012334


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++.+|++.+|.+|++.
T Consensus       227 ~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         227 EAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             HHHHHHHHHcccCHhhCCCC
Confidence            66889999999999999985

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.05  E-value=4.3e-10  Score=80.18  Aligned_cols=91  Identities=18%  Similarity=0.229  Sum_probs=62.9

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCC--cHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDL--NLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      .+.++|||||||+++|+++++.||+.......  .+...+..    .......|.+...          ......+..++
T Consensus       135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~----------~e~~~~l~~l~  200 (484)
T KOG1023|consen  135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKK----GGSNPFRPSIELL----------NELPPELLLLV  200 (484)
T ss_pred             ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHh----cCCCCcCcchhhh----------hhcchHHHHHH
Confidence            57789999999999999999999986543333  23333332    1112222222211          03334688999


Q ss_pred             hhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           87 VACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..||..+|..||++..+-..+..+...
T Consensus       201 ~~cw~e~P~~rPs~~~i~~~~~~~~~~  227 (484)
T KOG1023|consen  201 ARCWEEIPEKRPSIEQIRSKLLTINKG  227 (484)
T ss_pred             HHhcccChhhCccHHHHHhhhhhhccc
Confidence            999999999999999998888877764

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.05  E-value=3.2e-10  Score=77.80  Aligned_cols=101  Identities=12%  Similarity=0.018  Sum_probs=56.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cccccc-----ccccccCCCCcc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIV-----DPILLNDGKGET   70 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~   70 (127)
                      ||++.+. .++.++|+||||++++|+++|+.|+.....  ......+......    .+....     .+..... + ..
T Consensus       202 PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~  277 (335)
T PTZ00024        202 PELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE--IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRK-P-KD  277 (335)
T ss_pred             ChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCchhhCcchhhcccccccCcCC-c-cc
Confidence            5666543 468899999999999999999998864321  1111111111110    000000     0000000 0 00


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...........+.+++..|++.+|.+||++.+++.
T Consensus       278 ~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        278 LKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             HHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            00011123456789999999999999999999874

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.04  E-value=7.8e-11  Score=78.41  Aligned_cols=81  Identities=17%  Similarity=0.123  Sum_probs=53.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||....+.++.++|+||||++++++++|..|+..... .. .....   ...      .....            .....
T Consensus       191 Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-~~-~~~~~---~~~------~~~~~------------~~~~~  247 (280)
T cd05581         191 PELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-YL-TFQKI---LKL------EYSFP------------PNFPP  247 (280)
T ss_pred             HHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-HH-HHHHH---Hhc------CCCCC------------CccCH
Confidence            4555666788899999999999999999999863220 00 00000   000      00000            02245


Q ss_pred             HHHHHhhhccCCCccCCCCH----HHHH
Q 042057           81 SMVRIGVACSMESPQDRMNI----TNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~----~~v~  104 (127)
                      .+..++.+||+.+|.+||++    .+++
T Consensus       248 ~~~~li~~~l~~~p~~R~~~~~~~~~ll  275 (280)
T cd05581         248 DAKDLIEKLLVLDPQDRLGVNEGYDELK  275 (280)
T ss_pred             HHHHHHHHHhcCCHhhCCCcccCHHHHh
Confidence            67899999999999999999    6654

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.04  E-value=3.6e-10  Score=80.94  Aligned_cols=33  Identities=18%  Similarity=0.239  Sum_probs=28.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTD   33 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~   33 (127)
                      ||++.+..++.++|||||||++||++++..++.
T Consensus       331 PE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf  363 (461)
T PHA03211        331 PEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLF  363 (461)
T ss_pred             HHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcc
Confidence            677777889999999999999999999876653

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.04  E-value=6e-11  Score=81.83  Aligned_cols=82  Identities=16%  Similarity=0.067  Sum_probs=54.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||+++||++|..||....  .   .........+..      ...            .....
T Consensus       197 PE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~--~---~~~~~~i~~~~~------~~p------------~~~~~  253 (340)
T PTZ00426        197 PEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANE--P---LLIYQKILEGII------YFP------------KFLDN  253 (340)
T ss_pred             HHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCC--H---HHHHHHHhcCCC------CCC------------CCCCH
Confidence            677777778999999999999999999999986321  1   111111111100      000            02234


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++..|++.+|.+|+     ++.+++.
T Consensus       254 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        254 NCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             HHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            567899999999999995     7777653

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.03  E-value=3.6e-11  Score=82.07  Aligned_cols=78  Identities=14%  Similarity=-0.013  Sum_probs=52.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|||||||+++||++|..||....     ...........        .+.  .        +.....
T Consensus       165 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~--------~~~--~--------~~~~~~  221 (321)
T cd05603         165 PEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRD-----VSQMYDNILHK--------PLQ--L--------PGGKTV  221 (321)
T ss_pred             HHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCC-----HHHHHHHHhcC--------CCC--C--------CCCCCH
Confidence            677777789999999999999999999999985321     11111111111        000  0        002234


Q ss_pred             HHHHHhhhccCCCccCCCCHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT  101 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~  101 (127)
                      .+.+++..|++.+|.+||+..
T Consensus       222 ~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         222 AACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             HHHHHHHHHccCCHhhcCCCC
Confidence            678899999999999999754

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.03  E-value=4.9e-10  Score=75.60  Aligned_cols=103  Identities=16%  Similarity=0.042  Sum_probs=55.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----ccccccccccccCCC--Cc---c
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVDPILLNDGK--GE---T   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~---~   70 (127)
                      ||.+.+ ..++.++||||||++++|+++|+.|+....  .......+......    ....+..........  ..   .
T Consensus       186 PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (302)
T cd07864         186 PELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQ--ELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRR  263 (302)
T ss_pred             hHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHHHHhCCCChhhcccccccccccccccccccccc
Confidence            454433 346889999999999999999998886321  11111111111110    000000000000000  00   0


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+..+.+++..||+.+|.+||++.+++.
T Consensus       264 ~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         264 LREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             hhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            00000023456789999999999999999998864

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.03  E-value=1.3e-10  Score=76.31  Aligned_cols=79  Identities=23%  Similarity=0.181  Sum_probs=52.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.......+.++|+||||++++++++|..|+.....     ..........      ...+..            ....
T Consensus       162 Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~------~~~~~~------------~~~~  218 (250)
T cd05123         162 PEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILKD------PLRFPE------------FLSP  218 (250)
T ss_pred             hHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhcC------CCCCCC------------CCCH
Confidence            5666666778899999999999999999999853221     1111111110      000110            2245


Q ss_pred             HHHHHhhhccCCCccCCCCHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITN  102 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~  102 (127)
                      .+.+++.+||..+|.+||++.+
T Consensus       219 ~l~~~i~~~l~~~p~~R~~~~~  240 (250)
T cd05123         219 EARDLISGLLQKDPTKRLGSGG  240 (250)
T ss_pred             HHHHHHHHHhcCCHhhCCCccc
Confidence            6788999999999999999954

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.03  E-value=9.2e-11  Score=80.31  Aligned_cols=79  Identities=10%  Similarity=0.099  Sum_probs=49.8

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-ccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      .+.++.++|||||||+++||++|+.||....     ........... .......     .          ......+..
T Consensus       183 ~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~-----~----------~~~~~~~~~  242 (330)
T cd05601         183 KGTYGVECDWWSLGVIAYEMIYGRSPFHEGT-----SAKTYNNIMNFQRFLKFPE-----D----------PKVSSDFLD  242 (330)
T ss_pred             cCCCCCcceeecccceeeeeccCCCCCCCCC-----HHHHHHHHHcCCCccCCCC-----C----------CCCCHHHHH
Confidence            4567889999999999999999999986321     11111111110 0000000     0          022345677


Q ss_pred             HhhhccCCCccCCCCHHHHHH
Q 042057           85 IGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ++..|+. +|.+||++.+++.
T Consensus       243 li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         243 LIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             HHHHHcc-ChhhCCCHHHHhC
Confidence            8888897 9999999998773

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.02  E-value=1e-10  Score=81.69  Aligned_cols=34  Identities=29%  Similarity=0.331  Sum_probs=30.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+....++.++|||||||+++||++|+.||..
T Consensus       217 PE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~  250 (381)
T cd05626         217 PEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLA  250 (381)
T ss_pred             HHHHcCCCCCCccceeehhhHHHHHHhCCCCCcC
Confidence            6777777899999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.02  E-value=7.7e-11  Score=85.58  Aligned_cols=77  Identities=17%  Similarity=0.113  Sum_probs=55.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.|+.++|.|+|||++|||+.|..||....+++  +.+.+           +....  .        .|.-.+.
T Consensus       537 PEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee--~FdsI-----------~~d~~--~--------yP~~ls~  593 (694)
T KOG0694|consen  537 PEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEE--VFDSI-----------VNDEV--R--------YPRFLSK  593 (694)
T ss_pred             hhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHH-----------hcCCC--C--------CCCcccH
Confidence            788899999999999999999999999999987432211  11111           11110  1        1225567


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      +.+.++.+.+..+|++|.-.
T Consensus       594 ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  594 EAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             HHHHHHHHHhccCcccccCC
Confidence            78999999999999999866

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.02  E-value=1.6e-10  Score=77.72  Aligned_cols=81  Identities=15%  Similarity=0.055  Sum_probs=53.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+..+.++|+||||++++++++|+.|+....     ..........+.      ..+..            ....
T Consensus       167 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~------~~~~~------------~~~~  223 (290)
T cd05580         167 PEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN-----PIQIYEKILEGK------VRFPS------------FFSP  223 (290)
T ss_pred             hhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhcCC------ccCCc------------cCCH
Confidence            676767778899999999999999999999975322     111111111110      00110            2245


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      .+.+++.+||..+|.+|+     ++.+++
T Consensus       224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~  252 (290)
T cd05580         224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIK  252 (290)
T ss_pred             HHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence            678899999999999998     555554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.01  E-value=5.6e-10  Score=81.27  Aligned_cols=82  Identities=17%  Similarity=0.157  Sum_probs=61.6

Q ss_pred             CCcccCCCCC-CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVS-TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s-~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..|. .++||||.|||++.+++|+-||++.     .+..+..+...+. .++.                 ....
T Consensus       180 PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlKV~~G~-f~MP-----------------s~Is  236 (786)
T KOG0588|consen  180 PEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLKVQRGV-FEMP-----------------SNIS  236 (786)
T ss_pred             chhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHHHHcCc-ccCC-----------------CcCC
Confidence            7888888885 6799999999999999999999743     3444444444432 1111                 1444


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .++.+++.+++..||..|-|+.+|..
T Consensus       237 ~eaQdLLr~ml~VDp~~RiT~~eI~k  262 (786)
T KOG0588|consen  237 SEAQDLLRRMLDVDPSTRITTEEILK  262 (786)
T ss_pred             HHHHHHHHHHhccCccccccHHHHhh
Confidence            56688899999999999999999875

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=98.99  E-value=3.3e-10  Score=75.24  Aligned_cols=81  Identities=19%  Similarity=0.220  Sum_probs=55.1

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...|+-++|||||||.++|+.||+.||.....+-.-+    .+...+. .    |.+....          ..+..+..+
T Consensus       268 ~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~l----tkvln~e-P----P~L~~~~----------gFSp~F~~f  328 (391)
T KOG0983|consen  268 KPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVL----TKVLNEE-P----PLLPGHM----------GFSPDFQSF  328 (391)
T ss_pred             CCccchhhhhhhhccchhhhhcccCCCCCCCccHHHH----HHHHhcC-C----CCCCccc----------CcCHHHHHH
Confidence            3468899999999999999999999987432221111    1111110 1    2222211          245678899


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...|+..++.+||...++++
T Consensus       329 v~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  329 VKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             HHHHhhcCcccCcchHHHhc
Confidence            99999999999999998874

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.99  E-value=3e-10  Score=79.23  Aligned_cols=81  Identities=17%  Similarity=0.197  Sum_probs=56.9

Q ss_pred             CCcccCCC-CC-CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSG-VS-TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~-~s-~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++.+.. |+ .++||||+||+++.|++|+.||++..     .....+....+. ..     +            |...
T Consensus       190 PEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~-----~~~l~~ki~~~~-~~-----~------------p~~~  246 (370)
T KOG0583|consen  190 PEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN-----VPNLYRKIRKGE-FK-----I------------PSYL  246 (370)
T ss_pred             HHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcCC-cc-----C------------CCCc
Confidence            78887766 75 77999999999999999999997521     111222111110 00     0            1122


Q ss_pred             -HHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           79 -VNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        79 -~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                       ...+..++.+|+..+|..|+++.+++
T Consensus       247 ~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  247 LSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             CCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence             56778899999999999999999988

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=98.98  E-value=1.9e-09  Score=74.85  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++|||||||+++||++|+.||..
T Consensus       205 PE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~~  238 (363)
T cd05628         205 PEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (363)
T ss_pred             HHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCCC
Confidence            5777777899999999999999999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=98.97  E-value=8.4e-10  Score=76.96  Aligned_cols=79  Identities=14%  Similarity=0.108  Sum_probs=49.9

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.++|||||||+++||++|+.||....     ............ ...   .....          ......+.+++.
T Consensus       223 ~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~-~~~---~~~~~----------~~~s~~~~~li~  283 (370)
T cd05596         223 YYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMDHK-NSL---TFPDD----------IEISKQAKDLIC  283 (370)
T ss_pred             CCCCceeeeehhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCC-CcC---CCCCc----------CCCCHHHHHHHH
Confidence            47889999999999999999999986422     111111111110 000   00000          023456678889


Q ss_pred             hccCCCccC--CCCHHHHHH
Q 042057           88 ACSMESPQD--RMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~--RPs~~~v~~  105 (127)
                      .|+..+|.+  |+++.+++.
T Consensus       284 ~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         284 AFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             HHccChhhccCCCCHHHHhc
Confidence            999988887  999998864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=98.97  E-value=2.1e-10  Score=81.65  Aligned_cols=82  Identities=15%  Similarity=0.148  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+..+..+|+|+|||+++.|+.|+.||.+.++-. .|...          ..++.....            ...+
T Consensus       256 PElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Neyl-iFqkI----------~~l~y~fp~------------~fp~  312 (604)
T KOG0592|consen  256 PELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANEYL-IFQKI----------QALDYEFPE------------GFPE  312 (604)
T ss_pred             HHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccHHH-HHHHH----------HHhcccCCC------------CCCH
Confidence            788999999999999999999999999999986432100 00000          011222222            2235


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+|+.+.+-.+|.+|.+..++.+
T Consensus       313 ~a~dLv~KLLv~dp~~Rlt~~qIk~  337 (604)
T KOG0592|consen  313 DARDLIKKLLVRDPSDRLTSQQIKA  337 (604)
T ss_pred             HHHHHHHHHHccCccccccHHHHhh
Confidence            6677888889999999999977654

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=98.96  E-value=8.4e-10  Score=76.45  Aligned_cols=78  Identities=19%  Similarity=0.181  Sum_probs=55.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..-+.++|.|+|||++|||+.|+.||..... ..            .+..++...+.-....        ....
T Consensus       304 PEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~------------Tl~NIv~~~l~Fp~~~--------~vs~  362 (459)
T KOG0610|consen  304 PEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KE------------TLRNIVGQPLKFPEEP--------EVSS  362 (459)
T ss_pred             ceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hh------------hHHHHhcCCCcCCCCC--------cchh
Confidence            8899999999999999999999999999999864332 11            2222333222221110        3445


Q ss_pred             HHHHHhhhccCCCccCCCC
Q 042057           81 SMVRIGVACSMESPQDRMN   99 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs   99 (127)
                      .+.+++.+.+-.||.+|-.
T Consensus       363 ~akDLIr~LLvKdP~kRlg  381 (459)
T KOG0610|consen  363 AAKDLIRKLLVKDPSKRLG  381 (459)
T ss_pred             HHHHHHHHHhccChhhhhc
Confidence            6788999999999999987

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=2.4e-10  Score=78.32  Aligned_cols=78  Identities=18%  Similarity=0.142  Sum_probs=49.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+. .++.++|||||||++++|++|+.||....     ..........+.      ..+...           ...
T Consensus       165 PE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~------~~~~~~-----------~~~  222 (330)
T cd05586         165 PEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAED-----TQQMYRNIAFGK------VRFPKN-----------VLS  222 (330)
T ss_pred             HHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCC-----HHHHHHHHHcCC------CCCCCc-----------cCC
Confidence            5666544 47899999999999999999999985321     111111111110      001100           123


Q ss_pred             HHHHHHhhhccCCCccCCCCH
Q 042057           80 NSMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~  100 (127)
                      ..+.+++..||..+|.+||+.
T Consensus       223 ~~~~~li~~~L~~~P~~R~~~  243 (330)
T cd05586         223 DEGRQFVKGLLNRNPQHRLGA  243 (330)
T ss_pred             HHHHHHHHHHcCCCHHHCCCC
Confidence            456789999999999999853

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.95  E-value=9.6e-10  Score=76.25  Aligned_cols=34  Identities=26%  Similarity=0.311  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++....++.++|||||||+++||++|..||..
T Consensus       208 PE~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~  241 (364)
T cd05599         208 PEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCS  241 (364)
T ss_pred             HHHHcCCCCCCeeeeecchhHHHHhhcCCCCCCC
Confidence            6777777889999999999999999999999864

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=98.95  E-value=8.4e-10  Score=75.69  Aligned_cols=102  Identities=15%  Similarity=0.024  Sum_probs=54.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc----ccccccccc------ccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH----VVYIVDPIL------LNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~~~~~~   69 (127)
                      ||++.+ ..++.++|+||||++++++++|+.|+.....  ..............    ...+..+..      ....+..
T Consensus       178 PE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (332)
T cd07857         178 PEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY--VDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKK  255 (332)
T ss_pred             cHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH--HHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCc
Confidence            555544 3578899999999999999999988753221  00110000000000    000000000      0000000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ............+..++.+|++.+|.+||++.+++
T Consensus       256 ~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll  290 (332)
T cd07857         256 PFESIFPNANPLALDLLEKLLAFDPTKRISVEEAL  290 (332)
T ss_pred             chHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHh
Confidence            00000001245678999999999999999999886

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=98.94  E-value=2.1e-09  Score=72.22  Aligned_cols=102  Identities=17%  Similarity=0.173  Sum_probs=59.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---cccccccc-------ccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVDP-------ILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~~~~   69 (127)
                      ||.+.+ .+|..++|||+.||++.||++|..-|...+  ...-...+++....   +...+...       ++.......
T Consensus       170 PELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~S--DiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~e  247 (396)
T KOG0593|consen  170 PELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRS--DIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPE  247 (396)
T ss_pred             hhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcc--hHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCcc
Confidence            565555 689999999999999999999998876432  11111222222211   00111100       000000000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .....-+......++++..|+..||++|++..+++
T Consensus       248 pLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  248 PLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLL  282 (396)
T ss_pred             chhhhcccchHHHHHHHHHHhcCCccccccHHHHh
Confidence            01111123344778999999999999999999887

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=98.93  E-value=1.1e-10  Score=79.91  Aligned_cols=105  Identities=16%  Similarity=0.085  Sum_probs=61.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC-cHHHHHHhhcCCcccc-----------cccc---cccc-
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL-NLHRFARMALPDHVVY-----------IVDP---ILLN-   64 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~---~~~~-   64 (127)
                      ||++.+-..+.++||||+||||+|+++|...|......+. .+.+-+....+.+...           .++.   ...+ 
T Consensus       278 PEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~  357 (415)
T KOG0671|consen  278 PEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGK  357 (415)
T ss_pred             chheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCcccccccc
Confidence            8999999999999999999999999999988765432110 0111110000000000           0010   0000 


Q ss_pred             ------CCCC-cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           65 ------DGKG-ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        65 ------~~~~-~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                            .+.. -............+.+++.+.+..||.+|+|++|.+.
T Consensus       358 ~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  358 SKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             chhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                  0000 0011112234567899999999999999999998763

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=98.92  E-value=8.8e-10  Score=74.06  Aligned_cols=85  Identities=21%  Similarity=0.229  Sum_probs=51.9

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..  ...+.++||||||++++++++|..|+..... ...............      +..            +...
T Consensus       175 PE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~------~~~------------~~~~  235 (290)
T cd05613         175 PDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSE------PPY------------PQEM  235 (290)
T ss_pred             hhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccC------CCC------------CccC
Confidence            455543  2467889999999999999999999753211 111112211111110      000            1123


Q ss_pred             HHHHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      ...+..++.+||+.+|.+||     +..++.
T Consensus       236 ~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~  266 (290)
T cd05613         236 SALAKDIIQRLLMKDPKKRLGCGPSDADEIK  266 (290)
T ss_pred             CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHH
Confidence            45678899999999999997     555554

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=98.90  E-value=1.1e-09  Score=75.52  Aligned_cols=105  Identities=11%  Similarity=0.034  Sum_probs=54.7

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC--ccccccccc----cc---cCCCCcc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD--HVVYIVDPI----LL---NDGKGET   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~----~~---~~~~~~~   70 (127)
                      ||.+.. ..++.++||||||++++++++|+.|+...... ..+..........  .....+...    ..   ...+...
T Consensus       186 PE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  264 (345)
T cd07877         186 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI-DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMN  264 (345)
T ss_pred             HHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcc
Confidence            454433 45788999999999999999999998532211 1111111100000  000000000    00   0000000


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ...........+.+++..|++.+|.+||++.+++..
T Consensus       265 ~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h  300 (345)
T cd07877         265 FANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH  300 (345)
T ss_pred             hhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence            000000123467899999999999999999987743

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.87  E-value=1.6e-09  Score=76.56  Aligned_cols=98  Identities=16%  Similarity=0.170  Sum_probs=64.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC-----CCcHH---HHH--------------HhhcCC--cc--
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG-----DLNLH---RFA--------------RMALPD--HV--   54 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~-----~~~~~---~~~--------------~~~~~~--~~--   54 (127)
                      ||++.+..|+..+|||||+|++||++||--.|+...+.     +..+.   +++              +..+..  .+  
T Consensus       420 pEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~Lrh  499 (590)
T KOG1290|consen  420 PEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRH  499 (590)
T ss_pred             cceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceec
Confidence            79999999999999999999999999999887765432     22221   111              122211  01  


Q ss_pred             cccccc-----ccccCCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           55 VYIVDP-----ILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        55 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      +.-+.+     .+..++      .++.+....+.+++.-+++.+|.+|||+.+.+
T Consensus       500 I~~LK~WpL~~VL~eKY------~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl  548 (590)
T KOG1290|consen  500 IRRLKPWPLYEVLIEKY------EWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL  548 (590)
T ss_pred             ccccCCCcHHHHHHHHh------CCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence            000100     011111      23456778899999999999999999999876

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=98.86  E-value=8.3e-10  Score=79.46  Aligned_cols=82  Identities=17%  Similarity=0.261  Sum_probs=61.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.|+..+|.||+||++||+.+|+.||...     .+...+++...+.        .          .+|.....
T Consensus       169 PElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~--------v----------~~p~~~S~  225 (808)
T KOG0597|consen  169 PELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDP--------V----------KPPSTASS  225 (808)
T ss_pred             HHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCC--------C----------CCcccccH
Confidence            68888899999999999999999999999998521     2333443333321        1          11225566


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++...+..||.+|-+..+++.
T Consensus       226 ~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  226 SFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             HHHHHHHHHhhcChhhcccHHHHhc
Confidence            7889999999999999999998763

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=98.86  E-value=1.1e-09  Score=76.27  Aligned_cols=34  Identities=29%  Similarity=0.325  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||+++||++|+.||..
T Consensus       213 PE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~  246 (376)
T cd05598         213 PEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  246 (376)
T ss_pred             HHHHcCCCCCcceeeeeccceeeehhhCCCCCCC
Confidence            6777777889999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=98.86  E-value=2.3e-10  Score=75.57  Aligned_cols=82  Identities=22%  Similarity=0.235  Sum_probs=55.6

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .|+.+|||||+||.++|+.||+.|+.....    +.+.+.....+....+..     +.       ........+...+.
T Consensus       245 gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vfeql~~Vv~gdpp~l~~-----~~-------~~~~~s~~~~~fin  308 (361)
T KOG1006|consen  245 GYDIRSDVWSLGITLYEVATGNFPYRKWDS----VFEQLCQVVIGDPPILLF-----DK-------ECVHYSFSMVRFIN  308 (361)
T ss_pred             CcchhhhhhhhcceEeeeecCCCCcchHHH----HHHHHHHHHcCCCCeecC-----cc-------cccccCHHHHHHHH
Confidence            489999999999999999999999864322    223333322222111111     11       11135567888999


Q ss_pred             hccCCCccCCCCHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~  105 (127)
                      .|+..+..+||++.++..
T Consensus       309 tCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  309 TCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             HHhhcccccCcchhhhhc
Confidence            999999999999998764

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=98.85  E-value=4.3e-09  Score=73.59  Aligned_cols=34  Identities=29%  Similarity=0.325  Sum_probs=30.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++||||+||+++||++|+.||..
T Consensus       217 PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (382)
T cd05625         217 PEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLA  250 (382)
T ss_pred             HHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence            6777788899999999999999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=98.84  E-value=7e-10  Score=75.54  Aligned_cols=76  Identities=25%  Similarity=0.200  Sum_probs=52.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....++..+|.||+||+++||++|..||....     ......+...+.        +..         .+.....
T Consensus       194 PEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~~I~~~k--------~~~---------~p~~ls~  251 (357)
T KOG0598|consen  194 PEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYDKILKGK--------LPL---------PPGYLSE  251 (357)
T ss_pred             hHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHHHHhcCc--------CCC---------CCccCCH
Confidence            788889999999999999999999999999986322     112222212111        000         0112445


Q ss_pred             HHHHHhhhccCCCccCCC
Q 042057           81 SMVRIGVACSMESPQDRM   98 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP   98 (127)
                      ...+++...+..+|.+|-
T Consensus       252 ~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  252 EARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             HHHHHHHHHhccCHHHhc
Confidence            668888889999999995

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=98.84  E-value=2.6e-09  Score=77.21  Aligned_cols=34  Identities=29%  Similarity=0.197  Sum_probs=31.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..|+.+.|+||||||+.||++|..-|..
T Consensus       357 PEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG  390 (586)
T KOG0667|consen  357 PEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG  390 (586)
T ss_pred             chhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence            8999999999999999999999999999766654

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.83  E-value=6e-09  Score=74.66  Aligned_cols=81  Identities=16%  Similarity=0.237  Sum_probs=60.9

Q ss_pred             CCcccCCCCC-CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVS-TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s-~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..|+ +++||||+|+|+|-+++|+.||...+..+             .+-.++|=.-..          |....
T Consensus       187 PEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-------------TLTmImDCKYtv----------PshvS  243 (864)
T KOG4717|consen  187 PEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-------------TLTMIMDCKYTV----------PSHVS  243 (864)
T ss_pred             chhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-------------hhhhhhcccccC----------chhhh
Confidence            7888888886 56899999999999999999987543222             122233322211          22677


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .++.+++..++..+|.+|.+..+++
T Consensus       244 ~eCrdLI~sMLvRdPkkRAslEeI~  268 (864)
T KOG4717|consen  244 KECRDLIQSMLVRDPKKRASLEEIV  268 (864)
T ss_pred             HHHHHHHHHHHhcCchhhccHHHHh
Confidence            8899999999999999999999887

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.83  E-value=1.7e-09  Score=70.91  Aligned_cols=85  Identities=11%  Similarity=0.001  Sum_probs=57.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....|+.++|||+.|++++-++.|..||-+.  +...+.+-+...         +....+..        .....+
T Consensus       181 PEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~--~~~rlye~I~~g---------~yd~~~~~--------w~~is~  241 (355)
T KOG0033|consen  181 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE--DQHRLYEQIKAG---------AYDYPSPE--------WDTVTP  241 (355)
T ss_pred             HHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCc--cHHHHHHHHhcc---------ccCCCCcc--------cCcCCH
Confidence            78889999999999999999999999999998531  111121111100         00111111        113455


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ...+++.+++..+|.+|-|+.|.+
T Consensus       242 ~Ak~LvrrML~~dP~kRIta~EAL  265 (355)
T KOG0033|consen  242 EAKSLIRRMLTVNPKKRITADEAL  265 (355)
T ss_pred             HHHHHHHHHhccChhhhccHHHHh
Confidence            667888999999999999998876

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.82  E-value=8.1e-09  Score=72.79  Aligned_cols=103  Identities=10%  Similarity=-0.029  Sum_probs=60.1

Q ss_pred             CCcc-cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----------ccccccccccccCCCCc
Q 042057            1 VEYG-LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----------HVVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~-~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~   69 (127)
                      ||++ ..+.|+.+.|+|++||+++|+.+-+.-|....+-.+ + ..+...+..          .+...+.-+...-.+ .
T Consensus       178 PEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dq-i-~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~-~  254 (538)
T KOG0661|consen  178 PEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQ-I-YKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKP-S  254 (538)
T ss_pred             hHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHH-H-HHHHHHhCCCccccchhHHHHHHHhccCCCcCCC-C
Confidence            5655 567899999999999999999998877754321111 1 111111110          011111111111000 0


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ........+..+++.++.+|++-||.+|||+.+.++.
T Consensus       255 ~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  255 PLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             ChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            1111122467788999999999999999999987753

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=98.82  E-value=1.9e-09  Score=74.38  Aligned_cols=102  Identities=15%  Similarity=0.004  Sum_probs=54.6

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHH-----------hhcCCccccccccccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFAR-----------MALPDHVVYIVDPILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~   68 (127)
                      ||.+.. ..++.++|+||+|++++++++|+.|+...... ..+.....           ............ .+......
T Consensus       184 PE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  261 (343)
T cd07880         184 PEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVK-KLPRFRKK  261 (343)
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHHHhhcchhHHHHHH-hccccCcc
Confidence            444443 35788999999999999999999998632210 00111100           000000000000 00000000


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ............+.+++.+|++.+|.+||++.+++.
T Consensus       262 -~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~  297 (343)
T cd07880         262 -DFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA  297 (343)
T ss_pred             -hHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence             000001123446789999999999999999999883

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=98.81  E-value=6.5e-09  Score=72.58  Aligned_cols=27  Identities=26%  Similarity=0.302  Sum_probs=24.6

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      .++.++|||||||+++||++|+.||..
T Consensus       223 ~~~~~~DiwSlGvilyell~G~~Pf~~  249 (371)
T cd05622         223 YYGRECDWWSVGVFLYEMLVGDTPFYA  249 (371)
T ss_pred             cCCCccceeehhHHHHHHHhCCCCCCC
Confidence            378999999999999999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=98.81  E-value=4e-09  Score=73.62  Aligned_cols=34  Identities=24%  Similarity=0.208  Sum_probs=30.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++....++.++|||||||+++||++|..||..
T Consensus       217 PE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  250 (377)
T cd05629         217 PEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCS  250 (377)
T ss_pred             HHHHccCCCCCceeeEecchhhhhhhcCCCCCCC
Confidence            6777777899999999999999999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=98.81  E-value=1.2e-09  Score=75.74  Aligned_cols=86  Identities=14%  Similarity=0.067  Sum_probs=58.5

Q ss_pred             CCcccCCCC---CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGV---STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~---s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.+..+   ..++|+||+||+++-+++|..||.+..++.. +.+.+               ..+.+..+  ......
T Consensus       347 PEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~s-l~eQI---------------~~G~y~f~--p~~w~~  408 (475)
T KOG0615|consen  347 PEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPS-LKEQI---------------LKGRYAFG--PLQWDR  408 (475)
T ss_pred             hhheecCCeecccchheeeeccceEEEEeccCCCcccccCCcc-HHHHH---------------hcCccccc--Chhhhh
Confidence            787766643   3477999999999999999999975443221 22111               11111110  112235


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ..++..+++-.++..+|..|||+.+++
T Consensus       409 Iseea~dlI~~mL~VdP~~R~s~~eaL  435 (475)
T KOG0615|consen  409 ISEEALDLINWMLVVDPENRPSADEAL  435 (475)
T ss_pred             hhHHHHHHHHHhhEeCcccCcCHHHHh
Confidence            567788999999999999999999887

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=98.78  E-value=1.9e-09  Score=74.75  Aligned_cols=34  Identities=24%  Similarity=0.256  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||+++||++|+.||..
T Consensus       205 PE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~~  238 (360)
T cd05627         205 PEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCS  238 (360)
T ss_pred             HHHHcCCCCCCcceeccccceeeecccCCCCCCC
Confidence            6777778899999999999999999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=98.75  E-value=3.5e-08  Score=67.81  Aligned_cols=29  Identities=21%  Similarity=0.255  Sum_probs=25.6

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      .+.++.++|||||||++||+++|+.||..
T Consensus       182 ~~~~~~~~DvwSlGvil~ell~g~~Pf~~  210 (332)
T cd05623         182 KGKYGPECDWWSLGVCMYEMLYGETPFYA  210 (332)
T ss_pred             CCCCCCcCCEEeeHHHHHHHhcCCCCCCC
Confidence            34678899999999999999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=98.74  E-value=1.3e-08  Score=71.11  Aligned_cols=27  Identities=26%  Similarity=0.326  Sum_probs=24.5

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      .++.++||||+||+++||++|+.||..
T Consensus       223 ~~~~~~DiwSlG~ilyell~G~~Pf~~  249 (370)
T cd05621         223 YYGRECDWWSVGVFLFEMLVGDTPFYA  249 (370)
T ss_pred             CCCcccCEEeehHHHHHHHhCCCCCCC
Confidence            378899999999999999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.74  E-value=3.3e-09  Score=82.06  Aligned_cols=82  Identities=21%  Similarity=0.222  Sum_probs=54.2

Q ss_pred             CCcccCCC---CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc--CCccccccccccccCCCCcchhhhH
Q 042057            1 VEYGLGSG---VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL--PDHVVYIVDPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~~~---~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~   75 (127)
                      ||++.+..   -..+.||||+|||++||+||+.||.....      +|..+..  .++...                 .|
T Consensus      1407 PEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn------e~aIMy~V~~gh~Pq-----------------~P 1463 (1509)
T KOG4645|consen 1407 PEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN------EWAIMYHVAAGHKPQ-----------------IP 1463 (1509)
T ss_pred             chhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc------hhHHHhHHhccCCCC-----------------Cc
Confidence            66665443   34678999999999999999999864321      1222211  111111                 12


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....+-.+++-.|+..||.+|-++.++++
T Consensus      1464 ~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1464 ERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred             hhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence            245556688999999999999977765544

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.74  E-value=3.1e-08  Score=72.70  Aligned_cols=81  Identities=16%  Similarity=0.206  Sum_probs=54.9

Q ss_pred             ccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHH
Q 042057            4 GLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMV   83 (127)
Q Consensus         4 ~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (127)
                      .....|+.++|||||||.+.||.-+..|-...+     ....+.+.......-++.               |..-...+.
T Consensus       207 ~KD~PYDykaDiWSlGITLIEMAqiEPPHheln-----pMRVllKiaKSePPTLlq---------------PS~Ws~~F~  266 (1187)
T KOG0579|consen  207 FKDQPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSEPPTLLQ---------------PSHWSRSFS  266 (1187)
T ss_pred             ccCCCchhhhhHHhhhhHHHHHhccCCCccccc-----hHHHHHHHhhcCCCcccC---------------cchhhhHHH
Confidence            355679999999999999999999999854221     122222212111111111               224455678


Q ss_pred             HHhhhccCCCccCCCCHHHHH
Q 042057           84 RIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        84 ~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      +++..|+..+|..||+..+++
T Consensus       267 DfLk~cL~Knp~~Rp~aaqll  287 (1187)
T KOG0579|consen  267 DFLKRCLVKNPRNRPPAAQLL  287 (1187)
T ss_pred             HHHHHHHhcCCccCCCHHHHh
Confidence            899999999999999999887

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=98.71  E-value=6e-08  Score=66.65  Aligned_cols=28  Identities=21%  Similarity=0.278  Sum_probs=25.0

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      +.++.++|||||||++|+|++|+.||..
T Consensus       183 ~~~~~~~DiwslG~~l~el~~g~~Pf~~  210 (331)
T cd05597         183 GRYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             cCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence            4578899999999999999999999863

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=98.69  E-value=2.2e-08  Score=68.31  Aligned_cols=103  Identities=14%  Similarity=0.002  Sum_probs=55.8

Q ss_pred             CCcc-cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---ccccccc-----ccccc--CCCCc
Q 042057            1 VEYG-LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVD-----PILLN--DGKGE   69 (127)
Q Consensus         1 pE~~-~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~--~~~~~   69 (127)
                      ||.+ ....|+.+.||||.||++.||++|+.-|.....-.+  ...+....+.   .....+.     +-+..  ..+.-
T Consensus       196 PElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Q--l~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~  273 (359)
T KOG0660|consen  196 PELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQ--LQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQ  273 (359)
T ss_pred             HHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHH--HHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCC
Confidence            4433 445799999999999999999999987764321110  0011111100   0000000     00000  00000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....-+......+++..+++.-+|.+|.|+.+.+.
T Consensus       274 ~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  274 PFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA  309 (359)
T ss_pred             CHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            011111134556788999999999999999998764

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=98.69  E-value=1.6e-08  Score=69.44  Aligned_cols=28  Identities=21%  Similarity=0.277  Sum_probs=25.2

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      +.++.++||||||+++|||++|+.||..
T Consensus       183 ~~~~~~~DiwSlGvil~ell~g~~Pf~~  210 (331)
T cd05624         183 GKYGPECDWWSLGVCMYEMLYGETPFYA  210 (331)
T ss_pred             CCCCCcccEEeeehhhhhhhhCCCCccC
Confidence            4678899999999999999999999863

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=98.69  E-value=3.8e-09  Score=75.13  Aligned_cols=34  Identities=29%  Similarity=0.334  Sum_probs=32.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..|+..+|.||+|||++||+.|-.||..
T Consensus       357 PEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s  390 (550)
T KOG0605|consen  357 PEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCS  390 (550)
T ss_pred             hHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence            7899999999999999999999999999999864

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.68  E-value=3.2e-08  Score=72.03  Aligned_cols=84  Identities=20%  Similarity=0.210  Sum_probs=56.9

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .|.|+-++||||+||.+.|+.-+++|+...+     .....   |.  +..--.|.+...           .
T Consensus       191 PEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN-----AMSAL---YH--IAQNesPtLqs~-----------e  249 (948)
T KOG0577|consen  191 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSAL---YH--IAQNESPTLQSN-----------E  249 (948)
T ss_pred             hhHheeccccccCCccceeeccchhhhhhhcCCCccCch-----HHHHH---HH--HHhcCCCCCCCc-----------h
Confidence            55553   4789999999999999999999999975321     11111   11  000111222221           4


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      -+..+..++-.|++.-|.+|||..+++.
T Consensus       250 WS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  250 WSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             hHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            4567889999999999999999988763

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.68  E-value=8.3e-09  Score=74.60  Aligned_cols=77  Identities=14%  Similarity=0.230  Sum_probs=52.0

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC-CccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-DHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ..|+..+||||||.+++||+|+.-||.......+ +...+....+ ..+.++-                    -..+..+
T Consensus       218 E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQ-IYKKV~SGiKP~sl~kV~--------------------dPevr~f  276 (632)
T KOG0584|consen  218 ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQ-IYKKVTSGIKPAALSKVK--------------------DPEVREF  276 (632)
T ss_pred             hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHH-HHHHHHcCCCHHHhhccC--------------------CHHHHHH
Confidence            5789999999999999999999999875432111 1111111111 1111111                    2356788


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +-+|+.. ...||++.+++.
T Consensus       277 IekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  277 IEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             HHHHhcC-chhccCHHHHhh
Confidence            9999999 899999999874

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=98.68  E-value=4.4e-08  Score=71.99  Aligned_cols=25  Identities=4%  Similarity=-0.072  Sum_probs=21.8

Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+++.+|+..+|.+|||+.+++.
T Consensus       425 ~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        425 AGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             HHHHHHHHHccCCcccCCCHHHHhC
Confidence            3457999999999999999999884

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.64  E-value=1.1e-07  Score=66.85  Aligned_cols=91  Identities=16%  Similarity=0.247  Sum_probs=58.1

Q ss_pred             CcccchhhhHHHHHHHcCC----------CCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057           11 TNGDVYSYGILLLEMETTK----------KPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus        11 ~~~Dv~sfGi~l~e~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ..+||||||.++||+..+.          .||.+.-... .-.+-+++.       +...++....|+   .+...+...
T Consensus       405 k~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D-Ps~eeMrkV-------VCv~~~RP~ipn---rW~s~~~l~  473 (513)
T KOG2052|consen  405 KRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD-PSFEEMRKV-------VCVQKLRPNIPN---RWKSDPALR  473 (513)
T ss_pred             hHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC-CCHHHHhcc-------eeecccCCCCCc---ccccCHHHH
Confidence            4589999999999998743          3333221111 111111111       122233333222   444557888


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      .+.++|..||..+|..|-|+-.+...|.++.+
T Consensus       474 ~m~klMkeCW~~Np~aRltALriKKtl~~l~~  505 (513)
T KOG2052|consen  474 VMAKLMKECWYANPAARLTALRIKKTLAKLSN  505 (513)
T ss_pred             HHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence            99999999999999999998888888887765

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.63  E-value=1.8e-08  Score=70.57  Aligned_cols=34  Identities=26%  Similarity=0.290  Sum_probs=32.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..|+.++|.||||++++||+.|+.||+.
T Consensus       519 PEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdG  552 (683)
T KOG0696|consen  519 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG  552 (683)
T ss_pred             cceEEecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence            7888999999999999999999999999999975

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.63  E-value=1.9e-08  Score=65.59  Aligned_cols=82  Identities=20%  Similarity=0.205  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||...+...+..+|+|++|++++|++.|..||+....  .....-++      -.++..|               ...+.
T Consensus       191 pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~--~etYkrI~------k~~~~~p---------------~~is~  247 (281)
T KOG0580|consen  191 PEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH--SETYKRIR------KVDLKFP---------------STISG  247 (281)
T ss_pred             HhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh--HHHHHHHH------HccccCC---------------cccCh
Confidence            6777888899999999999999999999999874331  11111111      0111111               13445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+++..|+..+|.+|....+++.
T Consensus       248 ~a~dlI~~ll~~~p~~r~~l~~v~~  272 (281)
T KOG0580|consen  248 GAADLISRLLVKNPIERLALTEVMD  272 (281)
T ss_pred             hHHHHHHHHhccCccccccHHHHhh
Confidence            6788999999999999999998874

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=98.62  E-value=4.2e-08  Score=66.05  Aligned_cols=90  Identities=12%  Similarity=0.052  Sum_probs=59.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++...+|+.+.|+||+|+++|-+++|-.||...-+  .            .+..-+..++....- ..........++
T Consensus       232 Pevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg--~------------aispgMk~rI~~gqy-~FP~pEWs~VSe  296 (400)
T KOG0604|consen  232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--L------------AISPGMKRRIRTGQY-EFPEPEWSCVSE  296 (400)
T ss_pred             HHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC--c------------cCChhHHhHhhccCc-cCCChhHhHHHH
Confidence            6788888999999999999999999999999753111  0            111122222221110 011112234566


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+++...+..+|++|.|+.+++.
T Consensus       297 ~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  297 AAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             HHHHHHHHHhcCCchhheeHHHhhc
Confidence            6778888889999999999999884

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=98.61  E-value=5.9e-08  Score=68.06  Aligned_cols=86  Identities=15%  Similarity=0.071  Sum_probs=60.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....|+..+||||.|++++-|++|..||........ +...    ..+..      ......        ......
T Consensus       207 PEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~-~~~i----~~~~~------~f~~~~--------w~~is~  267 (382)
T KOG0032|consen  207 PEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEI-FLAI----LRGDF------DFTSEP--------WDDISE  267 (382)
T ss_pred             chhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHH-HHHH----HcCCC------CCCCCC--------ccccCH
Confidence            7888889999999999999999999999999865332111 1111    11111      111111        114466


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..-+++..++..+|..|+++.+++.
T Consensus       268 ~akd~i~~ll~~dp~~R~ta~~~L~  292 (382)
T KOG0032|consen  268 SAKDFIRKLLEFDPRKRLTAAQALQ  292 (382)
T ss_pred             HHHHHHHHhcccCcccCCCHHHHhc
Confidence            7788889999999999999999886

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=98.57  E-value=8.9e-08  Score=66.45  Aligned_cols=34  Identities=26%  Similarity=0.364  Sum_probs=32.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++..++|+.|+|+||.|+++|++++|+.||+.
T Consensus       183 PEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a  216 (429)
T KOG0595|consen  183 PEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDA  216 (429)
T ss_pred             HHHHHhccccchhhHHHHHHHHHHHHhCCCCccc
Confidence            7889999999999999999999999999999874

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=98.54  E-value=4e-08  Score=65.54  Aligned_cols=80  Identities=11%  Similarity=0.130  Sum_probs=53.8

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      -.|+..+|.|+.|++++.++.|+.||-.                 ..-.-++.-.+.+.+.  ..+....+.+.+..+++
T Consensus       203 pGYs~EVD~Wa~GVImyTLLaGcpPFwH-----------------RkQmlMLR~ImeGkyq--F~speWadis~~~KdLI  263 (411)
T KOG0599|consen  203 PGYSKEVDEWACGVIMYTLLAGCPPFWH-----------------RKQMLMLRMIMEGKYQ--FRSPEWADISATVKDLI  263 (411)
T ss_pred             CCccchhhHHHHHHHHHHHHcCCCchhH-----------------HHHHHHHHHHHhcccc--cCCcchhhccccHHHHH
Confidence            3588999999999999999999999731                 1000011111111110  11112335667888999


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+|++.+|++|-|.++++.
T Consensus       264 srlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  264 SRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHHHeeCchhcccHHHHhc
Confidence            9999999999999998874

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=98.53  E-value=5.8e-08  Score=66.39  Aligned_cols=101  Identities=12%  Similarity=-0.011  Sum_probs=60.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC--ccc--------cccccccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD--HVV--------YIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--------~~~~~~~~~~~~~~   69 (127)
                      ||.+.+ ..|+.+.||||.||++.||+.|+.-|..... ...+...++.....  ...        +...+.+...... 
T Consensus       194 PELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~-  271 (364)
T KOG0658|consen  194 PELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWH-  271 (364)
T ss_pred             HHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccce-
Confidence            565544 4699999999999999999999987765322 22233332222111  111        1111222211100 


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                        .-.......+.++++.+++..+|.+|.+..+++.
T Consensus       272 --~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  272 --KVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             --eecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence              0011234567889999999999999999887763

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.52  E-value=1.6e-07  Score=72.65  Aligned_cols=77  Identities=14%  Similarity=0.106  Sum_probs=47.3

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .|+.|+|+||+|||++||+.-   |.    ..+.-...+.....+.+..-  +....            +....-..++.
T Consensus       794 ~Yn~KiDmYSLGIVlFEM~yP---F~----TsMERa~iL~~LR~g~iP~~--~~f~~------------~~~~~e~slI~  852 (1351)
T KOG1035|consen  794 KYNSKIDMYSLGIVLFEMLYP---FG----TSMERASILTNLRKGSIPEP--ADFFD------------PEHPEEASLIR  852 (1351)
T ss_pred             cccchhhhHHHHHHHHHHhcc---CC----chHHHHHHHHhcccCCCCCC--ccccc------------ccchHHHHHHH
Confidence            599999999999999999985   22    12222222222222222111  11111            22233467788


Q ss_pred             hccCCCccCCCCHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~  105 (127)
                      ..++.+|.+|||+.+++.
T Consensus       853 ~Ll~hdP~kRPtA~eLL~  870 (1351)
T KOG1035|consen  853 WLLSHDPSKRPTATELLN  870 (1351)
T ss_pred             HHhcCCCccCCCHHHHhh
Confidence            889999999999999884

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=98.50  E-value=3.4e-07  Score=62.29  Aligned_cols=105  Identities=19%  Similarity=0.058  Sum_probs=58.6

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc-C-C-cccc---ccccccccCCCC--cch
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL-P-D-HVVY---IVDPILLNDGKG--ETR   71 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~-~~~~---~~~~~~~~~~~~--~~~   71 (127)
                      ||++.+. .|+...|+||+||++.||++++.-|..... ...+....+..- + + .+..   ..+.........  ...
T Consensus       189 PEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se-~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l  267 (323)
T KOG0594|consen  189 PEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE-IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDL  267 (323)
T ss_pred             HHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH-HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccch
Confidence            6777776 799999999999999999998877654332 111111111110 1 0 1111   112111100000  000


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ....+.......+++..|++.+|.+|.|+...+..
T Consensus       268 ~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  268 SSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH  302 (323)
T ss_pred             HHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence            00001112467889999999999999999887753

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=98.47  E-value=4.7e-08  Score=65.58  Aligned_cols=36  Identities=22%  Similarity=0.166  Sum_probs=32.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF   36 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~   36 (127)
                      ||.+.+..+..++|.|+|||+++||+.|..||.+.+
T Consensus       210 PEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~  245 (355)
T KOG0616|consen  210 PEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDN  245 (355)
T ss_pred             hHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCC
Confidence            677788899999999999999999999999986543

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=98.45  E-value=4.7e-08  Score=68.96  Aligned_cols=81  Identities=20%  Similarity=0.128  Sum_probs=53.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcc-ccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHV-VYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.|+.+.|.||+||+++||+.|+.||...               .+.. .+-++.++....     ...+...+
T Consensus       355 PEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~---------------KeKvk~eEvdrr~~~~~-----~ey~~kFS  414 (591)
T KOG0986|consen  355 PEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR---------------KEKVKREEVDRRTLEDP-----EEYSDKFS  414 (591)
T ss_pred             HHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh---------------hhhhhHHHHHHHHhcch-----hhcccccC
Confidence            78999999999999999999999999999997531               1111 112232222211     11122455


Q ss_pred             HHHHHHhhhccCCCccCCCCHH
Q 042057           80 NSMVRIGVACSMESPQDRMNIT  101 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~  101 (127)
                      ++...+....++.+|.+|.-..
T Consensus       415 ~eakslc~~LL~Kdp~~RLGcr  436 (591)
T KOG0986|consen  415 EEAKSLCEGLLTKDPEKRLGCR  436 (591)
T ss_pred             HHHHHHHHHHHccCHHHhccCC
Confidence            5666777777888888876443

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=98.45  E-value=7.4e-08  Score=65.14  Aligned_cols=85  Identities=18%  Similarity=0.278  Sum_probs=57.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..-.|..++||||+||...||.-|+.||.+.-.            . ..+.-+  |.-...     ....|..-+.
T Consensus       198 PEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHP------------M-RAIFMI--PT~PPP-----TF~KPE~WS~  257 (502)
T KOG0574|consen  198 PEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHP------------M-RAIFMI--PTKPPP-----TFKKPEEWSS  257 (502)
T ss_pred             HHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccc------------c-ceeEec--cCCCCC-----CCCChHhhhh
Confidence            4555556789999999999999999999999875311            0 001111  000000     1112335566


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..|+-.+|++|.|+..+.+
T Consensus       258 ~F~DFi~~CLiK~PE~R~TA~~L~~  282 (502)
T KOG0574|consen  258 EFNDFIRSCLIKKPEERKTALRLCE  282 (502)
T ss_pred             HHHHHHHHHhcCCHHHHHHHHHHhh
Confidence            7889999999999999999887763

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=98.39  E-value=2.8e-07  Score=65.64  Aligned_cols=101  Identities=18%  Similarity=0.131  Sum_probs=56.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHH-------HhhcCCccccccccccccCCCC--cc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFA-------RMALPDHVVYIVDPILLNDGKG--ET   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~--~~   70 (127)
                      ||.+.+ ..|+.+.|+||.|||+.||+.|+..+....+-++ +....       ...|+  ..++....+......  .+
T Consensus       288 PELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ-l~kIfklcGSP~e~~W~--~~kLP~~~~~kp~~~y~r~  364 (560)
T KOG0600|consen  288 PELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ-LHKIFKLCGSPTEDYWP--VSKLPHATIFKPQQPYKRR  364 (560)
T ss_pred             hHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH-HHHHHHHhCCCChhccc--cccCCcccccCCCCcccch
Confidence            565555 4699999999999999999999987754321111 11111       00111  001111111110000  01


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ..+.-.........++-..+..+|.+|.|+.+++
T Consensus       365 l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL  398 (560)
T KOG0600|consen  365 LRETFKDFPASALDLLEKLLSLDPDKRGTASSAL  398 (560)
T ss_pred             HHHHhccCCHHHHHHHHHHhccCccccccHHHHh
Confidence            1111223345667788888999999999998766

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=98.34  E-value=5.2e-07  Score=59.87  Aligned_cols=103  Identities=14%  Similarity=0.097  Sum_probs=57.4

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhh-------cCCccccccccccccCCCCcchh
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMA-------LPDHVVYIVDPILLNDGKGETRI   72 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~   72 (127)
                      ||.+.+ ..|...+|+||.||++.|++-|..-+... .+-..+...++..       |++ +..+.|..-....|.....
T Consensus       170 PELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~-sDidQL~~If~~LGTP~~~~WP~-~~~lpdY~~~~~~P~~~~~  247 (318)
T KOG0659|consen  170 PELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGD-SDIDQLSKIFRALGTPTPDQWPE-MTSLPDYVKIQQFPKPPLN  247 (318)
T ss_pred             hHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCC-chHHHHHHHHHHcCCCCcccCcc-ccccccHHHHhcCCCCccc
Confidence            565555 46899999999999999999988655432 1111222222111       111 1111111111111110000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..-..+.....+++...+..+|.+|.++.+.+.
T Consensus       248 ~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~  280 (318)
T KOG0659|consen  248 NLFPAASSDALDLLSKMLTYNPKKRITASQALK  280 (318)
T ss_pred             cccccccHHHHHHHHhhhccCchhcccHHHHhc
Confidence            011134556689999999999999999998764

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=98.33  E-value=5.4e-07  Score=56.88  Aligned_cols=52  Identities=21%  Similarity=0.353  Sum_probs=41.9

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||..... ..+.++|+|++|++++++                                                      
T Consensus       162 pe~~~~~~~~~~~~D~~~lg~~~~~l------------------------------------------------------  187 (215)
T cd00180         162 PEVLLGKGYYSEKSDIWSLGVILYEL------------------------------------------------------  187 (215)
T ss_pred             hhHhcccCCCCchhhhHHHHHHHHHH------------------------------------------------------
Confidence            3444444 677889999999999999                                                      


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ..+..++..|++.+|.+||++.+++..
T Consensus       188 ~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            144678889999999999999988753

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=98.29  E-value=1.1e-06  Score=60.16  Aligned_cols=101  Identities=17%  Similarity=0.083  Sum_probs=55.5

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHH-------hhcCC-ccccccccccccCCCC---
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFAR-------MALPD-HVVYIVDPILLNDGKG---   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~---   68 (127)
                      ||.+.+ ..|+.+.|+||+|||+.|++.++.-|....+- ..+...++       ..|++ .....+...-....+.   
T Consensus       246 PELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~-dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~l  324 (419)
T KOG0663|consen  246 PELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI-DQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNL  324 (419)
T ss_pred             HHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchH-HHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhh
Confidence            454444 46899999999999999999999777543211 11111111       11121 1111111000011110   


Q ss_pred             -cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           69 -ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        69 -~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                       ..+...  ..+..-.+++...+..+|.+|-|+.+.+
T Consensus       325 r~kF~~~--~lse~g~~Lln~llt~dP~kR~tA~~~L  359 (419)
T KOG0663|consen  325 RKKFGAL--SLSEQGFDLLNKLLTYDPGKRITAEDGL  359 (419)
T ss_pred             hhhcccc--ccchhHHHHHHHHhccCccccccHHHhh
Confidence             001111  1345667888889999999999998765

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.29  E-value=8.4e-07  Score=61.00  Aligned_cols=35  Identities=26%  Similarity=0.420  Sum_probs=32.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCcc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVM   35 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~   35 (127)
                      ||.+.+..|..++|.|++|++++||+.|+.||+..
T Consensus       420 peilrgeeygfsvdwwalgvlmfemmagrspfdiv  454 (593)
T KOG0695|consen  420 PEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIV  454 (593)
T ss_pred             hhhhcccccCceehHHHHHHHHHHHHcCCCCccee
Confidence            78889999999999999999999999999999854

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.28  E-value=6.9e-07  Score=61.14  Aligned_cols=92  Identities=11%  Similarity=-0.009  Sum_probs=56.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++....|..++|.|..|++++||++|+-||....  ...+.+++.           ...+.-.          .....
T Consensus       337 PEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~d--h~kLFeLIl-----------~ed~kFP----------r~ls~  393 (516)
T KOG0690|consen  337 PEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKD--HEKLFELIL-----------MEDLKFP----------RTLSP  393 (516)
T ss_pred             chhhccccccceeehhhhhHHHHHHHhccCcccccc--hhHHHHHHH-----------hhhccCC----------ccCCH
Confidence            677788899999999999999999999999985322  112222221           1111111          02233


Q ss_pred             HHHHHhhhccCCCccCCCC--HHHHHHHHHHhHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMN--ITNVVHELQSVKNILL  115 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs--~~~v~~~L~~~~~~~~  115 (127)
                      +...+....+..+|.+|.-  -.++.+....-.....
T Consensus       394 eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v  430 (516)
T KOG0690|consen  394 EAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASV  430 (516)
T ss_pred             HHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccC
Confidence            4456667778889998853  2344444444333333

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=98.26  E-value=2.1e-07  Score=69.63  Aligned_cols=82  Identities=21%  Similarity=0.178  Sum_probs=54.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....-+.++||||+||+++.+++ |.-||.+....+..+       ..+ ......  +..          ..++ 
T Consensus       683 PE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NI-------l~~-~~~L~~--L~~----------~~d~-  741 (903)
T KOG1027|consen  683 PEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANI-------LTG-NYTLVH--LEP----------LPDC-  741 (903)
T ss_pred             HHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhh-------hcC-ccceee--ecc----------CchH-
Confidence            677777777889999999999999988 588986532211111       000 000000  000          0122 


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                       ...+++.++++.+|..||++.+|+
T Consensus       742 -eA~dLI~~ml~~dP~~RPsa~~VL  765 (903)
T KOG1027|consen  742 -EAKDLISRMLNPDPQLRPSATDVL  765 (903)
T ss_pred             -HHHHHHHHhcCCCcccCCCHHHHh
Confidence             667899999999999999999998

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=98.22  E-value=2.4e-06  Score=60.15  Aligned_cols=80  Identities=20%  Similarity=0.199  Sum_probs=53.6

Q ss_pred             CCcccCCCCC-CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVS-TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s-~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+++..|. ..+|.||+||++|-++.|..||+...     ....++..-.+.   ...|                ..+
T Consensus       221 PEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs~Ga---YrEP----------------~~P  276 (668)
T KOG0611|consen  221 PEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQISRGA---YREP----------------ETP  276 (668)
T ss_pred             ccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhhccc---ccCC----------------CCC
Confidence            6788888775 56999999999999999999987432     222222111110   0111                122


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .+...++..++..+|++|.|+.+|.
T Consensus       277 SdA~gLIRwmLmVNP~RRATieDiA  301 (668)
T KOG0611|consen  277 SDASGLIRWMLMVNPERRATIEDIA  301 (668)
T ss_pred             chHHHHHHHHHhcCcccchhHHHHh
Confidence            3446677778888999999998876

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=98.21  E-value=5.8e-07  Score=63.86  Aligned_cols=84  Identities=14%  Similarity=0.103  Sum_probs=55.6

Q ss_pred             CCcccCCC----CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            1 VEYGLGSG----VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~~~~~----~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||...++.    .+.+.||||+||.||-++.|+.||.+.+     ....        ..+++...+....        .+
T Consensus       284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~-----~~~l--------~~KIvn~pL~fP~--------~p  342 (576)
T KOG0585|consen  284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF-----ELEL--------FDKIVNDPLEFPE--------NP  342 (576)
T ss_pred             hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch-----HHHH--------HHHHhcCcccCCC--------cc
Confidence            45554432    3567899999999999999999986432     1111        1222222222211        11


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+...+++.+.+..||..|-+..+|..
T Consensus       343 e~~e~~kDli~~lL~KdP~~Ri~l~~ik~  371 (576)
T KOG0585|consen  343 EINEDLKDLIKRLLEKDPEQRITLPDIKL  371 (576)
T ss_pred             cccHHHHHHHHHHhhcChhheeehhhhee
Confidence            44667789999999999999999988763

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=98.19  E-value=1.7e-06  Score=61.39  Aligned_cols=101  Identities=14%  Similarity=0.104  Sum_probs=56.7

Q ss_pred             CcccchhhhHHHHHHHcCCCCCCc--cccCCCcHHHHHHhhcC--CccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057           11 TNGDVYSYGILLLEMETTKKPTDV--MFEGDLNLHRFARMALP--DHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus        11 ~~~Dv~sfGi~l~e~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      .+.||||+|.++|||+++......  ...-...+..-+..+-.  +-..-++..+.....++   .+.....+.-+.+.+
T Consensus       403 kr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~---~W~~h~~~~~l~et~  479 (534)
T KOG3653|consen  403 KRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPD---AWRKHAGMAVLCETI  479 (534)
T ss_pred             HHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChh---hhhcCccHHHHHHHH
Confidence            458999999999999997765431  11111111111100000  00001111111111111   222234566788999


Q ss_pred             hhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           87 VACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      -.||..|+..|-|+..|.+++..+....
T Consensus       480 EeCWDhDaeARLTA~Cv~eR~~~l~~~~  507 (534)
T KOG3653|consen  480 EECWDHDAEARLTAGCVEERMAELMMLW  507 (534)
T ss_pred             HHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence            9999999999999999998887765443

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=98.18  E-value=1.8e-06  Score=62.11  Aligned_cols=78  Identities=17%  Similarity=0.221  Sum_probs=50.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....-+.++|.|++||+++|+++|+.||...  +.+.....+.+...-                   ...|....+
T Consensus       588 PEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~--dpmktYn~ILkGid~-------------------i~~Pr~I~k  646 (732)
T KOG0614|consen  588 PEIILNKGHDRAVDYWALGILIYELLTGSPPFSGV--DPMKTYNLILKGIDK-------------------IEFPRRITK  646 (732)
T ss_pred             chhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCC--chHHHHHHHHhhhhh-------------------hhcccccch
Confidence            66677777889999999999999999999998642  222222222211110                   111224445


Q ss_pred             HHHHHhhhccCCCccCCCC
Q 042057           81 SMVRIGVACSMESPQDRMN   99 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs   99 (127)
                      ...+++.+....+|.+|.-
T Consensus       647 ~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  647 TATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             hHHHHHHHHHhcCcHhhhc
Confidence            5567777767778998875

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=98.13  E-value=1.1e-06  Score=56.72  Aligned_cols=31  Identities=32%  Similarity=0.483  Sum_probs=27.6

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCcccc
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFE   37 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~   37 (127)
                      ..|+.+|||||+||.+.||.+++.||+...+
T Consensus       227 ~gY~vksDvWSLGItmiElA~lr~PY~~w~t  257 (282)
T KOG0984|consen  227 KGYSVKSDVWSLGITMIEMAILRFPYESWGT  257 (282)
T ss_pred             ccceeehhhhhhhhhhhhhhhccccccccCC
Confidence            3799999999999999999999999986543

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=98.02  E-value=1.8e-06  Score=61.41  Aligned_cols=87  Identities=13%  Similarity=0.165  Sum_probs=51.9

Q ss_pred             CCcccCC----CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            1 VEYGLGS----GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~~~~----~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||++.-+    +++.++||||.|++++.-+.|++||..... .+.+...      ..+...-.-....+          +
T Consensus       649 PEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs-QQdILqe------NTIlkAtEVqFP~K----------P  711 (775)
T KOG1151|consen  649 PECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS-QQDILQE------NTILKATEVQFPPK----------P  711 (775)
T ss_pred             cceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh-HHHHHhh------hchhcceeccCCCC----------C
Confidence            5666555    589999999999999999999999864321 1111110      01111111011111          0


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ....+...++.+|++....+|-..-++.
T Consensus       712 vVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  712 VVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             ccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            2334556788999999888887655443

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=97.92  E-value=2e-06  Score=62.04  Aligned_cols=35  Identities=29%  Similarity=0.095  Sum_probs=32.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCcc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVM   35 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~   35 (127)
                      ||.+.+-.|+..-|+||.||.|||+.||+..|...
T Consensus       604 PEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~  638 (752)
T KOG0670|consen  604 PEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR  638 (752)
T ss_pred             cceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence            88999999999999999999999999999887653

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=97.92  E-value=1.6e-05  Score=52.17  Aligned_cols=98  Identities=11%  Similarity=-0.004  Sum_probs=54.3

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHH------------HHHHhhcC---CccccccccccccCCCCcc-
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLH------------RFARMALP---DHVVYIVDPILLNDGKGET-   70 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~-   70 (127)
                      ..|+-+-|+|||||++.+|+.++.||.........+.            .++.+..-   .....++....... .... 
T Consensus       208 ~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~-w~~Fi  286 (338)
T KOG0668|consen  208 QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKP-WSRFI  286 (338)
T ss_pred             hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhcccccc-HHHhC
Confidence            4578889999999999999999999865432222222            22221111   11111111110000 0000 


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......-...+.++++-..+..+-++|+|++|.+.
T Consensus       287 ~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  287 NSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             CccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence            00000012356778888889999999999998774

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=97.91  E-value=2e-05  Score=52.48  Aligned_cols=96  Identities=9%  Similarity=0.049  Sum_probs=51.6

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC--cHHHHH-----HhhcCC-ccccccccccccC-CCCcchhhhHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL--NLHRFA-----RMALPD-HVVYIVDPILLND-GKGETRINSRL   76 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~   76 (127)
                      ...++.+.|||.-||++.||++|..-+.... +.+  .++...     ...|++ ...++.. .+... .+.+... ...
T Consensus       203 ~r~yg~~iDiWgAgCimaeMwtrspimqgnt-eqqql~~Is~LcGs~tkevWP~~d~lpL~~-sie~ePl~~~~~r-kv~  279 (376)
T KOG0669|consen  203 DREYGPPIDIWGAGCIMAEMWTRSPIMQGNT-EQQQLHLISQLCGSITKEVWPNVDNLPLYQ-SIELEPLPKGQKR-KVK  279 (376)
T ss_pred             ccccCCcchhHhHHHHHHHHHccCccccCCh-HHHHHHHHHHHhccCCcccCCCcccchHHH-hccCCCCCcchhh-hhh
Confidence            3568999999999999999999987654321 121  122211     122332 1111111 11000 0000000 001


Q ss_pred             HHH------HHHHHHhhhccCCCccCCCCHHHHH
Q 042057           77 ACV------NSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        77 ~~~------~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      +..      .+.++++-..+..||++|+...+++
T Consensus       280 n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~al  313 (376)
T KOG0669|consen  280 NRLKPYVKDDEALDLLEKLLKLDPTKRIDADQAL  313 (376)
T ss_pred             hhcccccCChhHHHHHHHHhccCcccCcchHhhh
Confidence            111      2567788888999999999887765

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=97.90  E-value=6.8e-06  Score=59.79  Aligned_cols=82  Identities=15%  Similarity=0.137  Sum_probs=52.1

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||...+..+ ...+|+||+|++++.++.|.-||+...             +.+    .-++.+.+.+-      .+-...
T Consensus       223 PEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-------------lk~----Lr~rvl~gk~r------Ip~~ms  279 (596)
T KOG0586|consen  223 PELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-------------LKE----LRPRVLRGKYR------IPFYMS  279 (596)
T ss_pred             hHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-------------ccc----ccchheeeeec------ccceee
Confidence            555555555 577999999999999999999987422             111    11111111110      111334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .++-+++...+-.+|.+|+++.+++.
T Consensus       280 ~dce~lLrk~lvl~Pskr~~~dqim~  305 (596)
T KOG0586|consen  280 CDCEDLLRKFLVLNPSKRGPCDQIMK  305 (596)
T ss_pred             chhHHHHHHhhccCccccCCHHHhhh
Confidence            45667777778888999999888874

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=97.88  E-value=1e-05  Score=55.06  Aligned_cols=33  Identities=27%  Similarity=0.260  Sum_probs=29.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTD   33 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~   33 (127)
                      ||++.+-.+...+||||.||++.||++|+.-|.
T Consensus       186 pevil~~~~ke~vdiwSvGci~gEli~~~Vlf~  218 (369)
T KOG0665|consen  186 PEVILGMGYKENVDIWSVGCIMGELILGTVLFP  218 (369)
T ss_pred             chheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence            778878789999999999999999999987765

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=97.81  E-value=5.5e-06  Score=59.39  Aligned_cols=77  Identities=22%  Similarity=0.206  Sum_probs=47.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||-+.+..|+.++|||++|++++|++. -...++...        .    ..+.....+.+....++             
T Consensus       431 PEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~~--------t----~~d~r~g~ip~~~~~d~-------------  485 (516)
T KOG1033|consen  431 PEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERIA--------T----LTDIRDGIIPPEFLQDY-------------  485 (516)
T ss_pred             HHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHHH--------h----hhhhhcCCCChHHhhcC-------------
Confidence            678889999999999999999999998 333433110        0    00000111222221121             


Q ss_pred             HHHHHHhhhccCCCccCCCCHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITN  102 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~  102 (127)
                      +.-+.+.+..+.++|.+||++.+
T Consensus       486 p~e~~ll~~lls~~p~~RP~~~~  508 (516)
T KOG1033|consen  486 PEEYTLLQQLLSPSPEERPSAIE  508 (516)
T ss_pred             cHHHHHHHHhcCCCcccCchHHH
Confidence            22367788889999999995543

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=97.80  E-value=1.3e-05  Score=51.39  Aligned_cols=30  Identities=27%  Similarity=0.416  Sum_probs=25.8

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ....++.++|+|+||++++++++|+.||..
T Consensus       173 ~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      173 GGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            445667799999999999999999999853

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=97.79  E-value=4.8e-05  Score=56.50  Aligned_cols=36  Identities=22%  Similarity=0.195  Sum_probs=29.7

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCccc
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVMF   36 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~   36 (127)
                      ||... .+.|+..+|.|||||++|+.+||..||..+.
T Consensus       192 Pel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~  228 (732)
T KOG4250|consen  192 PELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG  228 (732)
T ss_pred             hHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence            34344 4778999999999999999999999997654

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=97.79  E-value=3.3e-05  Score=56.35  Aligned_cols=22  Identities=32%  Similarity=0.495  Sum_probs=18.5

Q ss_pred             cccchhhhHHHHHHHcCCC-CCC
Q 042057           12 NGDVYSYGILLLEMETTKK-PTD   33 (127)
Q Consensus        12 ~~Dv~sfGi~l~e~~~~~~-~~~   33 (127)
                      +.||||+||++++|+++.. |+.
T Consensus       412 ~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        412 LFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             ccchhhHHHHHHHHHhCCCCCcc
Confidence            4799999999999999764 554

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=97.75  E-value=2.1e-05  Score=59.57  Aligned_cols=78  Identities=14%  Similarity=0.197  Sum_probs=53.8

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .|+.++|+||+||+..||..|..|+.+.-.    .         ..+..+..  ....     -+..+..-.+.+.+++.
T Consensus       204 tyd~R~D~WsLGITaIEladG~PPl~DmHP----m---------raLF~IpR--NPPP-----kLkrp~kWs~~FndFIs  263 (953)
T KOG0587|consen  204 TYDYRSDLWSLGITAIEMAEGAPPLCDMHP----M---------RALFLIPR--NPPP-----KLKRPKKWSKKFNDFIS  263 (953)
T ss_pred             CcccccchhhccceeehhcCCCCCccCcch----h---------hhhccCCC--CCCc-----cccchhhHHHHHHHHHH
Confidence            478899999999999999999999764210    0         01111111  0000     12223456678999999


Q ss_pred             hccCCCccCCCCHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~  105 (127)
                      .|+..+-..||++.+++.
T Consensus       264 ~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  264 TCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             HHHhhccccCcchhhhcc
Confidence            999999999999988774

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.69  E-value=1.7e-05  Score=58.91  Aligned_cols=91  Identities=19%  Similarity=0.143  Sum_probs=59.0

Q ss_pred             CCcccCCCCCCc-ccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTN-GDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~-~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....|... .||||.||++..|++|+.||...-.....+   ....+.........+           .......+
T Consensus       493 pE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~~~~~~-----------~~~~~~lp  558 (601)
T KOG0590|consen  493 PEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRNIFEGP-----------NRLLSLLP  558 (601)
T ss_pred             cccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhccccccccccCh-----------HHHHHhch
Confidence            688888888766 799999999999999999986543222222   000111111010111           11122445


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....++.+.++.+|.+|-|+.+++.
T Consensus       559 ~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  559 RETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hhHHHHHHHHccCChhheecHHHHhh
Confidence            67788899999999999999999874

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=97.40  E-value=0.00011  Score=54.63  Aligned_cols=36  Identities=25%  Similarity=0.211  Sum_probs=32.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF   36 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~   36 (127)
                      ||++....++..+|.||.|+||+||+.|+.||.+..
T Consensus       840 pevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  840 PEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             hHHhcccCccccchhhHhhHHHHHHhhCCCCccCCC
Confidence            788888899999999999999999999999997653

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=97.37  E-value=0.00018  Score=48.47  Aligned_cols=83  Identities=17%  Similarity=0.141  Sum_probs=49.6

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      ..+.+|+|.|||+++..++|+.||....-.......|.  .|...    ..+++....         ....+....+-.+
T Consensus       202 ~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~--~w~~r----k~~~~P~~F---------~~fs~~a~r~Fkk  266 (378)
T KOG1345|consen  202 VNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWE--QWLKR----KNPALPKKF---------NPFSEKALRLFKK  266 (378)
T ss_pred             ecccccchheeeeeeeeecCCCcchhhhccCchHHHHH--HHhcc----cCccCchhh---------cccCHHHHHHHHH
Confidence            56789999999999999999999975443333333333  23221    111111111         0233445556666


Q ss_pred             ccCCCccCCCCHHHHHHH
Q 042057           89 CSMESPQDRMNITNVVHE  106 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~~~  106 (127)
                      -+..++.+|-.+.++..+
T Consensus       267 ~lt~~~~drcki~~~kk~  284 (378)
T KOG1345|consen  267 SLTPRFKDRCKIWTAKKM  284 (378)
T ss_pred             hcCCcccccchhHHHHHH
Confidence            788888888666655544

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.28  E-value=0.00016  Score=48.77  Aligned_cols=34  Identities=21%  Similarity=0.241  Sum_probs=28.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+++ ..|+.+.||||.||++.|++.++.-|..
T Consensus       226 PEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQA  260 (449)
T KOG0664|consen  226 PELLMGARRYTGAVDIWSVGCIFAELLQRKILFQA  260 (449)
T ss_pred             HHHhhcchhhcCccceehhhHHHHHHHhhhhhhhc
Confidence            566655 4689999999999999999998877654

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=97.27  E-value=6e-05  Score=58.46  Aligned_cols=34  Identities=26%  Similarity=0.199  Sum_probs=30.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.-..|.+.+|.|++||+++|.+.|+.||+.
T Consensus       227 PeVilrqgygkpvdwwamGiIlyeFLVgcvpffG  260 (1205)
T KOG0606|consen  227 PEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  260 (1205)
T ss_pred             hhhhhhhccCCCccHHHHHHHHHHHheeeeeccC
Confidence            6777888899999999999999999999999864

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=97.21  E-value=0.00018  Score=56.36  Aligned_cols=80  Identities=10%  Similarity=0.119  Sum_probs=50.4

Q ss_pred             CCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            9 VSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .+++.||||.||++.|+++ |+.+|..-     .+..+-.  ......+.+-..+.               ...+.++++
T Consensus       215 L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~aYr~--~~~~~~e~~Le~Ie---------------d~~~Rnlil  272 (1431)
T KOG1240|consen  215 LTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLLAYRS--GNADDPEQLLEKIE---------------DVSLRNLIL  272 (1431)
T ss_pred             cChhhhhhhhhHHHHHHHhcCCCcccHH-----HHHhHhc--cCccCHHHHHHhCc---------------CccHHHHHH
Confidence            6788999999999999988 77776521     0111111  10111111111111               124678999


Q ss_pred             hccCCCccCCCCHHHHHHHHHHh
Q 042057           88 ACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      .+++.+|.+|-++.+.+..-.++
T Consensus       273 ~Mi~rdPs~RlSAedyL~~yrG~  295 (1431)
T KOG1240|consen  273 SMIQRDPSKRLSAEDYLQKYRGL  295 (1431)
T ss_pred             HHHccCchhccCHHHHHHhhhcc
Confidence            99999999999999988774433

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=97.21  E-value=0.00024  Score=55.59  Aligned_cols=28  Identities=21%  Similarity=0.318  Sum_probs=26.0

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      |.|...+|.||+||++|||+.|..||..
T Consensus       256 g~yG~ecDwWSlGV~~YEMlyG~TPFYa  283 (1317)
T KOG0612|consen  256 GEYGRECDWWSLGVFMYEMLYGETPFYA  283 (1317)
T ss_pred             cccCCccchhhhHHHHHHHHcCCCcchH
Confidence            6799999999999999999999999854

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=96.93  E-value=0.00049  Score=48.43  Aligned_cols=35  Identities=23%  Similarity=0.253  Sum_probs=27.7

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCcc
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVM   35 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~   35 (127)
                      ||++. .+.-+.++||||-|++++.+++++-||...
T Consensus       246 PEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a  281 (418)
T KOG1167|consen  246 PEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKA  281 (418)
T ss_pred             hHHHhhccCcCCccceeeccceeehhhccccccccC
Confidence            45443 345678899999999999999999998643

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=96.83  E-value=0.0021  Score=43.80  Aligned_cols=63  Identities=13%  Similarity=0.063  Sum_probs=38.3

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.+.|.|++|+++|.++++..|+........                  ....-..         +.+.++.+..++.
T Consensus       226 ~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~------------------~~~~f~~---------C~~~Pe~v~~LI~  278 (288)
T PF14531_consen  226 PYTFATDAWQLGITLYSLWCGRLPFGLSSPEAD------------------PEWDFSR---------CRDMPEPVQFLIR  278 (288)
T ss_dssp             EE-HHHHHHHHHHHHHHHHHSS-STCCCGGGST------------------SGGGGTT---------SS---HHHHHHHH
T ss_pred             eeeeccCHHHHHHHHHHHHHccCCCCCCCcccc------------------ccccchh---------cCCcCHHHHHHHH
Confidence            468889999999999999999999863211100                  0000001         1144567778888


Q ss_pred             hccCCCccCC
Q 042057           88 ACSMESPQDR   97 (127)
Q Consensus        88 ~c~~~~p~~R   97 (127)
                      ..++.+|.+|
T Consensus       279 ~lL~~~~~~R  288 (288)
T PF14531_consen  279 GLLQRNPEDR  288 (288)
T ss_dssp             HHT-SSGGGS
T ss_pred             HHccCCcccC
Confidence            8899999887

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=96.69  E-value=0.00089  Score=46.05  Aligned_cols=33  Identities=24%  Similarity=0.256  Sum_probs=26.7

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTD   33 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~   33 (127)
                      ||.+.+ ..|+.+.|||+.||++.|+++.+.-|.
T Consensus       208 PELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~  241 (438)
T KOG0666|consen  208 PELLLGARHYTKAIDVWAIGCIFAELLTLEPLFK  241 (438)
T ss_pred             hHHhcccccccchhhhHHHHHHHHHHHccCcccc
Confidence            565555 468999999999999999999776554

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=96.66  E-value=0.0012  Score=45.63  Aligned_cols=28  Identities=21%  Similarity=0.229  Sum_probs=25.3

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ..|+++.|.||+|+|+|=|++|-.||..
T Consensus       266 ~~YDKrCDlwSLGvIlYImLsGYpPFvG  293 (463)
T KOG0607|consen  266 TFYDKRCDLWSLGVILYIMLSGYPPFVG  293 (463)
T ss_pred             ccccccccHHHHHHHHHHHHhCCCCccC
Confidence            3588999999999999999999999864

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=96.38  E-value=0.005  Score=46.28  Aligned_cols=82  Identities=13%  Similarity=0.194  Sum_probs=52.8

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      ..|.|...+|||+.||...|+---..|..+.    .......-+.--+    .-.+.+..+.          .-.+.+.+
T Consensus       188 rkggynqlcdiwa~gitAiel~eLqpplfdl----hpmr~l~LmTkS~----~qpp~lkDk~----------kws~~fh~  249 (829)
T KOG0576|consen  188 RKGGYNQLCDIWALGITAIELGELQPPLFDL----HPMRALFLMTKSG----FQPPTLKDKT----------KWSEFFHN  249 (829)
T ss_pred             hcccccccccccccccchhhhhhcCCccccc----chHHHHHHhhccC----CCCCcccCCc----------cchHHHHH
Confidence            4577999999999999999998888885432    1111111111111    0011222221          34567889


Q ss_pred             HhhhccCCCccCCCCHHHHH
Q 042057           85 IGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ++..|+..+|.+||+...++
T Consensus       250 fvK~altknpKkRptaeklL  269 (829)
T KOG0576|consen  250 FVKGALTKNPKKRPTAEKLL  269 (829)
T ss_pred             HHHHHhcCCCccCCChhhhe
Confidence            99999999999999987655

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=96.24  E-value=0.015  Score=37.26  Aligned_cols=31  Identities=26%  Similarity=0.403  Sum_probs=23.2

Q ss_pred             CcccCC-CCCCcccchhhhHHHHHHHcCCCCC
Q 042057            2 EYGLGS-GVSTNGDVYSYGILLLEMETTKKPT   32 (127)
Q Consensus         2 E~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~   32 (127)
                      .++.+. -|+.+.|+||-||++.|+...-.|.
T Consensus       171 dvlfgakly~tsidmwsagcifaelanagrpl  202 (292)
T KOG0662|consen  171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPL  202 (292)
T ss_pred             ceeeeeehhccchHhhhcchHHHHHhhcCCCC
Confidence            344443 4788899999999999999844443

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=95.94  E-value=0.0052  Score=42.76  Aligned_cols=75  Identities=15%  Similarity=0.193  Sum_probs=43.1

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCC-CCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKP-TDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMV   83 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (127)
                      ...+.+.++|||+||...+||..+..- ......  .            ..+..+...+.+.            ....-+
T Consensus       255 ~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~--~------------~~ee~ia~~i~~l------------en~lqr  308 (458)
T KOG1266|consen  255 TTTNTTGASDIYKFGMCALEMAILEIQSTNSESK--V------------EVEENIANVIIGL------------ENGLQR  308 (458)
T ss_pred             cccccccchhhhhhhHHHHHHHHheeccCCCcce--e------------ehhhhhhhheeec------------cCcccc
Confidence            344567789999999999998776543 211000  0            0011111111110            011124


Q ss_pred             HHhhhccCCCccCCCCHHHHHH
Q 042057           84 RIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        84 ~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+..|+...|.+||++++++.
T Consensus       309 ~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  309 GSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             CcCcccccCCCCCCcchhhhhc
Confidence            5677899999999999998764

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=95.67  E-value=0.018  Score=41.24  Aligned_cols=73  Identities=16%  Similarity=0.182  Sum_probs=45.4

Q ss_pred             CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhhcc
Q 042057           11 TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVACS   90 (127)
Q Consensus        11 ~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~   90 (127)
                      .++|.|+.|.+.||+++...||...  ++..+..  +. |.+    .--|.+            +..++..+.+++...+
T Consensus       436 ~kAD~WA~GalaYEIfg~~NPFY~r--Gem~L~~--r~-Yqe----~qLPal------------p~~vpp~~rqlV~~lL  494 (598)
T KOG4158|consen  436 EKADTWAAGALAYEIFGRSNPFYKR--GEMLLDT--RT-YQE----SQLPAL------------PSRVPPVARQLVFDLL  494 (598)
T ss_pred             chhhhhhhhhhHHHHhccCCccccc--chheech--hh-hhh----hhCCCC------------cccCChHHHHHHHHHh
Confidence            6799999999999999999997531  1111100  00 111    001111            2245556778888889


Q ss_pred             CCCccCCCCHHHHH
Q 042057           91 MESPQDRMNITNVV  104 (127)
Q Consensus        91 ~~~p~~RPs~~~v~  104 (127)
                      +.+|.+|++..-..
T Consensus       495 ~r~pskRvsp~iAA  508 (598)
T KOG4158|consen  495 KRDPSKRVSPNIAA  508 (598)
T ss_pred             cCCccccCCccHHH
Confidence            99999998865333

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=95.62  E-value=0.047  Score=36.26  Aligned_cols=94  Identities=16%  Similarity=0.132  Sum_probs=53.6

Q ss_pred             CCcccC---CCCCCcccchhhhHHHHHHHcCCCCCCccccC--CCcHHHHHHhhcCCccccccccccccCCCCcchhhhH
Q 042057            1 VEYGLG---SGVSTNGDVYSYGILLLEMETTKKPTDVMFEG--DLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~---~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   75 (127)
                      ||.+..   ..++...|+||+|+++++++++..|+......  .......+.................            
T Consensus       177 pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------  244 (384)
T COG0515         177 PEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNP------------  244 (384)
T ss_pred             HHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCcccc------------
Confidence            444554   57788999999999999999999995432211  1111122211111100000000000            


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .........++..|+..+|..|.+.......
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~  275 (384)
T COG0515         245 ELISKAASDLLKKLLAKDPKNRLSSSSDLSH  275 (384)
T ss_pred             chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence            1233567788888888899999987765543

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=95.62  E-value=0.00061  Score=49.95  Aligned_cols=34  Identities=18%  Similarity=0.207  Sum_probs=31.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++....|..+-|+||.|+++|.-++|..||..
T Consensus       735 PEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNE  768 (888)
T KOG4236|consen  735 PEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNE  768 (888)
T ss_pred             HHHHhhccccccccceeeeEEEEEEecccccCCC
Confidence            7888889999999999999999999999999863

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=95.15  E-value=0.012  Score=43.79  Aligned_cols=27  Identities=30%  Similarity=0.463  Sum_probs=23.7

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ....++|.||||++++|+++|..|+..
T Consensus       167 gh~~a~D~ws~gvl~felltg~~pf~~  193 (612)
T KOG0603|consen  167 GHLSAADWWSFGVLAFELLTGTLPFGG  193 (612)
T ss_pred             ccCCcccchhhhhhHHHHhhCCCCCch
Confidence            456789999999999999999999753

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=93.93  E-value=0.014  Score=43.13  Aligned_cols=81  Identities=15%  Similarity=0.121  Sum_probs=46.7

Q ss_pred             CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC--ccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057           11 TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD--HVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus        11 ~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      .++||||.|.++.|+.-|..-+....  .......+.+.+..  ....+....+           ....+.+.++.+...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~--~s~~l~~i~k~~~~d~~~~~~a~e~~-----------~~~~~d~~~~~~~~~  176 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELT--ESEYLEILLKYYTDDQELLSTAMEHL-----------IQLLADKKRLPLLKK  176 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHH--HHHHHHHHHHhccCchhHHHHHHHHH-----------HHHhhhHhHHHHhcc
Confidence            68999999999999988876543211  11111222222322  1111111111           122556678888899


Q ss_pred             ccCCCccCCCCHHHHH
Q 042057           89 CSMESPQDRMNITNVV  104 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~  104 (127)
                      |....|..||...+..
T Consensus       177 c~~~~~~ir~l~~~~~  192 (725)
T KOG1093|consen  177 CLWLEPIIRPLPMELS  192 (725)
T ss_pred             CCccccccccchhHHh
Confidence            9999988888554433

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=93.11  E-value=0.016  Score=43.65  Aligned_cols=32  Identities=31%  Similarity=0.507  Sum_probs=27.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCC
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPT   32 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~   32 (127)
                      ||++.....+.++|+||+|++++-+..+..+.
T Consensus       178 pE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i  209 (700)
T KOG2137|consen  178 PEYLLGTTNTPASDVFSLGVLIYTIYNGGKSI  209 (700)
T ss_pred             chhhccccccccccceeeeeEEEEEecCCcch
Confidence            78888888899999999999999998655554

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=92.70  E-value=0.11  Score=41.43  Aligned_cols=35  Identities=29%  Similarity=0.322  Sum_probs=30.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCcc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVM   35 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~   35 (127)
                      ||.+.+..-...+|.|++|++++|.++|..|+...
T Consensus      1004 Pe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1004 PEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred             CcccccccCCCcchhhhhhhhhhhhhcCCCCCCCc
Confidence            66777778888999999999999999999998754

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=88.79  E-value=0.17  Score=38.27  Aligned_cols=85  Identities=21%  Similarity=0.195  Sum_probs=47.5

Q ss_pred             CcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            2 EYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         2 E~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      |...+ +......|+||.|+++..+++|..|++...........|....  .....    ....            ....
T Consensus       199 E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~----~~~~------------~~~~  260 (601)
T KOG0590|consen  199 EHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNK--GRFTQ----LPWN------------SISD  260 (601)
T ss_pred             ccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccc--ccccc----Cccc------------cCCh
Confidence            44444 2445678999999999999999999875433222222221110  00000    0000            1122


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ....+...++..+|..|.+.+++.
T Consensus       261 ~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  261 QAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             hhhhcccccccCCchhcccccccc
Confidence            345566667778888888877654

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=87.03  E-value=6.2  Score=29.26  Aligned_cols=102  Identities=16%  Similarity=0.066  Sum_probs=55.4

Q ss_pred             CCCCcccchhhhHHHHHHHc-CCCCCCccccC--CCcHH--HHHHhhcCCccccccccccccCCCCcchhhhHH-HHHHH
Q 042057            8 GVSTNGDVYSYGILLLEMET-TKKPTDVMFEG--DLNLH--RFARMALPDHVVYIVDPILLNDGKGETRINSRL-ACVNS   81 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   81 (127)
                      .-+..+|.|.+|+++++++. |+-||....-.  .....  ....-    .+....+.+.....+.   ..+|- -....
T Consensus       197 ~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g----~f~ya~~~~~g~~p~P---~~~P~~~Lpp~  269 (637)
T COG4248         197 ERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHG----RFAYASDQRRGLKPPP---RSIPLSMLPPD  269 (637)
T ss_pred             CCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcc----eeeechhccCCCCCCC---CCCChhhcCHH
Confidence            34677899999999999887 58898764311  11000  11100    1111111111111100   00111 12345


Q ss_pred             HHHHhhhccCCC--ccCCCCHHHHHHHHHHhHHHHhh
Q 042057           82 MVRIGVACSMES--PQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        82 ~~~l~~~c~~~~--p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      +-.+-.+|+...  ++-|||.+.-+..|..+.+++..
T Consensus       270 vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~  306 (637)
T COG4248         270 VQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK  306 (637)
T ss_pred             HHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence            566777887753  67999999888888877776643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	127
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-11
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-10
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	6e-10

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 58.0 bits (141), Expect = 3e-11
 Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMF---EGDLNLHRFARMALPD-HVVYI 57
           EY      S   DV+ YG++LLE+ T ++  D+     + D+ L  + +  L +  +  +
Sbjct: 205 EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEAL 264

Query: 58  VDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQS 109
           VD  L  + K E         V  ++++ + C+  SP +R  ++ VV  L+ 
Sbjct: 265 VDVDLQGNYKDE--------EVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 54.9 bits (133), Expect = 4e-10
 Identities = 23/97 (23%), Positives = 42/97 (43%), Gaps = 10/97 (10%)

Query: 14  DVYSYGILLLEMETTKKPTDVMF-EGDLNLHRFARMALPD-HVVYIVDPILLNDGKGETR 71
           DVYS+G++L E+   +           +NL  +A  +  +  +  IVDP L        +
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL------ADK 276

Query: 72  INSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQ 108
           I      +       V C   S +DR ++ +V+ +L+
Sbjct: 277 IRPE--SLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 54.1 bits (131), Expect = 6e-10
 Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 12/99 (12%)

Query: 14  DVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD--HVVYIVDPILLNDGKGETR 71
           D+YS+G++LLE+ T     D   E    L         +   +   +D  + +       
Sbjct: 216 DIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMNDADSTS-- 272

Query: 72  INSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
                  V +M  +   C  E    R +I  V   LQ +
Sbjct: 273 -------VEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	127
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	99.81
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	99.8
4aoj_A	329	High affinity nerve growth factor receptor; transf	99.8
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	99.79
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.78
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.78
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.69
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	99.67
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.66
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.65
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.64
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.62
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.62
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.61
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.6
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.6
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.6
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.6
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	99.59
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.59
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.58
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.58
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.57
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.57
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.56
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.56
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.56
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.56
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.56
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	99.55
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.55
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.55
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.55
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.55
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.55
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.55
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.55
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.55
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.55
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.54
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.54
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.54
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.54
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.54
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.53
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.53
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.53
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.53
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.53
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.53
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.53
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.53
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.53
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.53
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.52
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.52
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.52
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.52
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.52
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.52
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.52
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.52
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.52
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.52
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.51
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.51
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.51
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	99.51
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.51
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.5
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.5
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.49
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.49
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.49
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.49
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.48
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	99.48
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.48
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.48
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	99.48
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.48
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.48
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.47
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.47
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.47
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.46
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.46
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.46
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.45
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.44
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.44
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.43
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.43
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.43
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.43
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.43
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.42
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.42
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.42
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.42
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.41
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.41
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	99.41
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.4
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.4
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.4
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.4
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.39
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.39
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.39
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.39
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.39
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.38
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.38
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.38
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.37
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.37
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.37
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.37
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.37
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.36
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.36
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.36
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.36
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.36
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.36
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.36
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.35
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.35
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.35
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.35
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.35
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.35
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.35
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.35
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.35
3bhy_A	283	Death-associated protein kinase 3; death associate	99.34
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.34
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.34
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.34
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.34
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.34
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.34
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.33
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.33
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.33
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.33
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.33
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.33
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.33
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.33
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.33
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.32
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.32
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.32
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.32
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.32
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.32
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.32
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.31
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.31
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.31
3niz_A	311	Rhodanese family protein; structural genomics, str	99.31
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.31
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.31
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.31
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.31
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.3
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.3
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.3
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.3
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.3
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.29
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.29
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.29
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.28
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.28
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.28
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.28
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.28
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.27
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.27
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.27
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.27
3uqc_A	286	Probable conserved transmembrane protein; structur	99.27
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.27
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.27
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.26
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.26
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.26
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.25
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.25
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.25
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.25
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.25
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.25
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.25
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.25
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.24
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.24
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.24
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.24
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.24
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.24
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.24
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.24
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.24
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.23
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.23
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.23
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.23
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.23
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.23
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.22
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.22
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.22
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.22
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.21
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.21
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.21
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.2
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.2
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.2
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.19
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.19
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.19
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.19
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.18
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.18
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.18
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.18
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.18
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.18
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.18
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.16
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.16
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.16
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.14
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.13
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.12
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.09
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.08
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.02
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	98.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	98.96
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	97.1

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=99.81  E-value=1.7e-21  Score=133.53  Aligned_cols=95  Identities=17%  Similarity=0.174  Sum_probs=68.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.|+.++|||||||++|||+| |+.||...... ..+...+.....        +    ..|        ..++
T Consensus       256 PE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~-~~~~~~i~~g~~--------~----~~p--------~~~~  314 (353)
T 4ase_A          256 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTR--------M----RAP--------DYTT  314 (353)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCC--------C----CCC--------TTCC
T ss_pred             HHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-HHHHHHHHcCCC--------C----CCC--------ccCC
Confidence            688888999999999999999999998 89998643211 112222211110        0    111        1344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+.+++..||+.+|.+|||+.+|+..|+.++++...
T Consensus       315 ~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~~~  351 (353)
T 4ase_A          315 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ  351 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHhhC
Confidence            5788999999999999999999999999998876543

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=99.80  E-value=1.7e-20  Score=126.53  Aligned_cols=88  Identities=19%  Similarity=0.271  Sum_probs=64.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++|||+| |+.||....  ...+...+.   .+...         ..        +..++
T Consensus       216 PE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~--~~~~~~~i~---~~~~~---------~~--------p~~~~  273 (308)
T 4gt4_A          216 PEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS--NQDVVEMIR---NRQVL---------PC--------PDDCP  273 (308)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCC--HHHHHHHHH---TTCCC---------CC--------CTTCC
T ss_pred             HHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC---------CC--------cccch
Confidence            788888999999999999999999998 899986432  112222221   11111         11        11445


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++..||+.+|.+||||.+|+..|+..
T Consensus       274 ~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~  304 (308)
T 4gt4_A          274 AWVYALMIECWNEFPSRRPRFKDIHSRLRAW  304 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            6788999999999999999999999998753

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=99.80  E-value=2.2e-20  Score=126.98  Aligned_cols=94  Identities=24%  Similarity=0.252  Sum_probs=68.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++|||+| |+.||....  ...+...+..   +..     +.    .        |..++
T Consensus       229 PE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~~~i~~---g~~-----~~----~--------p~~~~  286 (329)
T 4aoj_A          229 PESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS--NTEAIDCITQ---GRE-----LE----R--------PRACP  286 (329)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC--HHHHHHHHHH---TCC-----CC----C--------CTTCC
T ss_pred             hhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCC--HHHHHHHHHc---CCC-----CC----C--------ccccc
Confidence            788889999999999999999999999 899986432  1112222211   100     00    1        11345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+.+++.+||+.+|.+||||.+|+..|+.+.+..+.
T Consensus       287 ~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp~  323 (329)
T 4aoj_A          287 PEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPPV  323 (329)
T ss_dssp             HHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC-
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCcc
Confidence            6788999999999999999999999999998775443

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=99.79  E-value=1.5e-20  Score=126.29  Aligned_cols=93  Identities=22%  Similarity=0.281  Sum_probs=68.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++|||+| |+.||....  ...+...+.   .+...         ..        |..++
T Consensus       199 PE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~--~~~~~~~i~---~~~~~---------~~--------p~~~~  256 (299)
T 4asz_A          199 PESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLS--NNEVIECIT---QGRVL---------QR--------PRTCP  256 (299)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--HHHHHHHHH---HTCCC---------CC--------CTTCC
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHH---cCCCC---------CC--------Cccch
Confidence            688888999999999999999999998 899986432  111222221   11100         01        11445


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++..||+.+|.+|||+.+|+..|+.+.+..+
T Consensus       257 ~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p  292 (299)
T 4asz_A          257 QEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP  292 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence            678899999999999999999999999998876544

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=99.78  E-value=2.8e-20  Score=125.34  Aligned_cols=97  Identities=22%  Similarity=0.301  Sum_probs=65.1

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .+.|+.++|||||||++|||++|+.||..... ...+...+...+.       .+.+..         .+..
T Consensus       203 PE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~-~~~~~~~~~~~~~-------~p~~~~---------~~~~  265 (307)
T 3omv_A          203 PEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN-RDQIIFMVGRGYA-------SPDLSK---------LYKN  265 (307)
T ss_dssp             HHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC-HHHHHHHHHTTCC-------CCCSTT---------SCTT
T ss_pred             HHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh-HHHHHHHHhcCCC-------CCCccc---------cccc
Confidence            56664   34689999999999999999999999864321 1111111111111       111110         1114


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ++..+.+++..||+.+|.+||||.+|+..|+.+..+.
T Consensus       266 ~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l  302 (307)
T 3omv_A          266 CPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL  302 (307)
T ss_dssp             SCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence            4567889999999999999999999999998776543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.78  E-value=4.9e-19  Score=119.16  Aligned_cols=95  Identities=13%  Similarity=0.226  Sum_probs=61.7

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCC----------cHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL----------NLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      .++.++|||||||++|||++|+.|+........          ............    ..++.+....       ....
T Consensus       194 ~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~rp~~p~~~-------~~~~  262 (303)
T 3hmm_A          194 ESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ----KLRPNIPNRW-------QSCE  262 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS----CCCCCCCGGG-------GSSH
T ss_pred             ccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcc----cCCCCCCccc-------cchH
Confidence            467899999999999999999877643221111          111111111111    1122222111       1125


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      +...+.+++.+||+.+|.+||||.+|++.|+++.++
T Consensus       263 ~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~  298 (303)
T 3hmm_A          263 ALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence            667889999999999999999999999999887653

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.69  E-value=4.7e-17  Score=109.68  Aligned_cols=104  Identities=24%  Similarity=0.352  Sum_probs=76.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCcccc-CCCcHHHHHHhhcC-CccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFE-GDLNLHRFARMALP-DHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.++.++.++||||||++++|+++|+.|+..... .......|...... ......+++.+....        +...
T Consensus       210 PE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~  281 (321)
T 2qkw_B          210 PEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI--------RPES  281 (321)
T ss_dssp             HHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS--------CHHH
T ss_pred             HHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc--------CHHH
Confidence            5666677889999999999999999999999875432 23344455433333 244455555444332        2367


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ...+.+++..||+.+|.+||++.+++..|+.+..
T Consensus       282 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~  315 (321)
T 2qkw_B          282 LRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR  315 (321)
T ss_dssp             HHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhh
Confidence            7889999999999999999999999999998764

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=99.67  E-value=1.9e-17  Score=112.74  Aligned_cols=94  Identities=15%  Similarity=0.148  Sum_probs=67.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++|||++|+.||.......  +...+..... ..     ..            .+...+.
T Consensus       225 PE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~--~~~~i~~~~~-~~-----~~------------~~~~~s~  284 (336)
T 4g3f_A          225 PEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP--LCLKIASEPP-PI-----RE------------IPPSCAP  284 (336)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC--CHHHHHHSCC-GG-----GG------------SCTTSCH
T ss_pred             HHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH--HHHHHHcCCC-Cc-----hh------------cCccCCH
Confidence            788888899999999999999999999999986533221  1111111000 00     00            1113456


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      .+.+++.+||+.+|.+|||+.++++.|...+...
T Consensus       285 ~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~  318 (336)
T 4g3f_A          285 LTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV  318 (336)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence            7788999999999999999999999888776543

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.66  E-value=5.7e-17  Score=109.35  Aligned_cols=102  Identities=26%  Similarity=0.419  Sum_probs=77.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCcc---ccCCCcHHHHHHhhcCC-ccccccccccccCCCCcchhhhHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVM---FEGDLNLHRFARMALPD-HVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||.+.++.++.++||||||++++++++|+.||...   .........|+...... ......+..+....+        .
T Consensus       204 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~  275 (326)
T 3uim_A          204 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK--------D  275 (326)
T ss_dssp             HHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCC--------H
T ss_pred             HHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccC--------H
Confidence            56666677899999999999999999999998632   22344566666655554 445555555544432        3


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      .....+..++..||+.+|.+|||+.++++.|+..
T Consensus       276 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~  309 (326)
T 3uim_A          276 EEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD  309 (326)
T ss_dssp             HHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence            6778899999999999999999999999999753

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.65  E-value=2.9e-16  Score=104.64  Aligned_cols=92  Identities=14%  Similarity=0.252  Sum_probs=60.7

Q ss_pred             CCCCcccchhhhHHHHHHHcC----------CCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            8 GVSTNGDVYSYGILLLEMETT----------KKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      .++.++||||||+++||+++|          ..||.........................+..           ......
T Consensus       199 ~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  267 (301)
T 3q4u_A          199 DSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN-----------RWFSDP  267 (301)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG-----------GGGGSH
T ss_pred             cCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCCh-----------hhccCc
Confidence            345789999999999999999          67765443333323222222211111111111           011225


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ....+.+++..||+.+|.+|||+.++++.|+++
T Consensus       268 ~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          268 TLTSLAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            678899999999999999999999999999875

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.64  E-value=1.4e-15  Score=102.72  Aligned_cols=102  Identities=18%  Similarity=0.248  Sum_probs=65.1

Q ss_pred             CCcccCCCCCCc------ccchhhhHHHHHHHcC----------CCCCCccccCCCcHHHHHHhhcCCcccccccccccc
Q 042057            1 VEYGLGSGVSTN------GDVYSYGILLLEMETT----------KKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLN   64 (127)
Q Consensus         1 pE~~~~~~~s~~------~Dv~sfGi~l~e~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   64 (127)
                      ||.+.....+..      +|||||||++|||++|          ..|+..............................  
T Consensus       215 PE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  292 (337)
T 3mdy_A          215 PEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRW--  292 (337)
T ss_dssp             HHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG--
T ss_pred             hhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccc--
Confidence            455555555554      8999999999999999          5555433222222222221111111111111111  


Q ss_pred             CCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           65 DGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                               ....+...+.+++..||+.+|.+||++.++++.|+.+..+
T Consensus       293 ---------~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~  332 (337)
T 3mdy_A          293 ---------SSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES  332 (337)
T ss_dssp             ---------GGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             ---------hhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence                     1126778899999999999999999999999999988765

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=99.62  E-value=4.7e-16  Score=104.03  Aligned_cols=84  Identities=20%  Similarity=0.272  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.|+.++|||||||++|||++|+.||....    ...........+......+                ...+.
T Consensus       199 PE~~~-~~y~~~~DiwSlGvilyelltg~~Pf~~~~----~~~~~~~~i~~~~~~~~~~----------------~~~~~  257 (290)
T 3fpq_A          199 PEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPASFD----------------KVAIP  257 (290)
T ss_dssp             GGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCGGGG----------------GCCCH
T ss_pred             HHHcC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC----cHHHHHHHHHcCCCCCCCC----------------ccCCH
Confidence            78765 569999999999999999999999985321    1112222111111100011                12234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       258 ~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          258 EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            5788999999999999999998864

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.62  E-value=7.8e-16  Score=103.93  Aligned_cols=95  Identities=12%  Similarity=0.183  Sum_probs=62.1

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCC-----------cHHHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL-----------NLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      .++.++||||||+++||+++|+.||........           ....+............+...           ....
T Consensus       214 ~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  282 (322)
T 3soc_A          214 DAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDY-----------WQKH  282 (322)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGG-----------GGSS
T ss_pred             CCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCcccc-----------cccc
Confidence            456678999999999999999999864322111           111111111111111111111           1112


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      .....+.+++..||+.+|.+|||+.++++.|+.+...
T Consensus       283 ~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~  319 (322)
T 3soc_A          283 AGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRL  319 (322)
T ss_dssp             HHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence            5567799999999999999999999999999988754

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.61  E-value=1.1e-15  Score=103.49  Aligned_cols=93  Identities=12%  Similarity=0.230  Sum_probs=62.3

Q ss_pred             CCcccchhhhHHHHHHHcC----------CCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057           10 STNGDVYSYGILLLEMETT----------KKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus        10 s~~~Dv~sfGi~l~e~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      +.++||||||+++|||++|          ..||............+............+....           ....+.
T Consensus       235 ~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~  303 (342)
T 1b6c_B          235 FKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW-----------QSCEAL  303 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG-----------GTSHHH
T ss_pred             CCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc-----------cchhHH
Confidence            3689999999999999998          5676544333333333332222221111111111           112667


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.++
T Consensus       304 ~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~  337 (342)
T 1b6c_B          304 RVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  337 (342)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence            7899999999999999999999999999988765

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.60  E-value=1.4e-16  Score=109.19  Aligned_cols=102  Identities=11%  Similarity=0.129  Sum_probs=70.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++|||++|+.||....... .........+.......+++.+...           ..+.
T Consensus       230 PE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~  297 (364)
T 3op5_A          230 IDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP-KYVRDSKIRYRENIASLMDKCFPAA-----------NAPG  297 (364)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH-HHHHHHHHHHHHCHHHHHHHHSCTT-----------CCCH
T ss_pred             HHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH-HHHHHHHHHhhhhHHHHHHHhcccc-----------cCHH
Confidence            566777779999999999999999999999987432221 1222222222212222222222111           2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      .+..++..||+.+|.+||++.++...|+.+....
T Consensus       298 ~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~  331 (364)
T 3op5_A          298 EIAKYMETVKLLDYTEKPLYENLRDILLQGLKAI  331 (364)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHc
Confidence            7889999999999999999999999999988764

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.60  E-value=2.8e-16  Score=110.60  Aligned_cols=91  Identities=19%  Similarity=0.217  Sum_probs=66.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||+++|||++ |+.||.....  ..+...+.....            ...        +..++
T Consensus       355 PE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~------------~~~--------p~~~~  412 (450)
T 1k9a_A          355 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYK------------MDA--------PDGCP  412 (450)
T ss_dssp             HHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCT--TTHHHHHHTTCC------------CCC--------CTTCC
T ss_pred             HHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCC------------CCC--------CCcCC
Confidence            677778889999999999999999998 9999864321  122222211110            001        11345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++..||+.+|.+|||+.+++..|+.+...
T Consensus       413 ~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~  446 (450)
T 1k9a_A          413 PAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH  446 (450)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence            6788999999999999999999999999988754

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.60  E-value=1.1e-16  Score=110.32  Aligned_cols=91  Identities=24%  Similarity=0.317  Sum_probs=64.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++||+++ |..||....  .......+..   +.       ++  ..+        ..++
T Consensus       284 PE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~--~~~~~~~~~~---~~-------~~--~~~--------~~~~  341 (377)
T 3cbl_A          284 PEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS--NQQTREFVEK---GG-------RL--PCP--------ELCP  341 (377)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC--HHHHHHHHHT---TC-------CC--CCC--------TTCC
T ss_pred             HhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHc---CC-------CC--CCC--------CCCC
Confidence            566667788999999999999999998 999986422  1111111111   10       00  001        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++..||+.+|.+|||+.+++..|+.+...
T Consensus       342 ~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~  375 (377)
T 3cbl_A          342 DAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR  375 (377)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence            5678999999999999999999999999988754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.60  E-value=3.4e-16  Score=107.68  Aligned_cols=94  Identities=18%  Similarity=0.253  Sum_probs=67.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..++.++|||||||++|||++ |..||....  ...+...+.....        ...    +        ..+.
T Consensus       274 PE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~~--------~~~----~--------~~~~  331 (370)
T 2psq_A          274 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFKLLKEGHR--------MDK----P--------ANCT  331 (370)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCC--------CCC----C--------TTSC
T ss_pred             HhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcCCC--------CCC----C--------CCCC
Confidence            566777889999999999999999999 999986432  1112222211110        001    1        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.....+
T Consensus       332 ~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~  368 (370)
T 2psq_A          332 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN  368 (370)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence            5788999999999999999999999999999876543

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=99.59  E-value=4.7e-16  Score=106.36  Aligned_cols=83  Identities=12%  Similarity=0.159  Sum_probs=59.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..|+.++||||+||++|||++|+.||....     ..........+...     .+..            ..+.
T Consensus       194 PE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~~~-----~~~~------------~~s~  251 (350)
T 4b9d_A          194 PEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS-----MKNLVLKIISGSFP-----PVSL------------HYSY  251 (350)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTCCC-----CCCT------------TSCH
T ss_pred             HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHcCCCC-----CCCc------------cCCH
Confidence            688888899999999999999999999999986321     22222222211111     0111            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       252 ~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          252 DLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6788999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.59  E-value=6.9e-16  Score=102.57  Aligned_cols=98  Identities=11%  Similarity=0.047  Sum_probs=67.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC-CCcHHHHH-HhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG-DLNLHRFA-RMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+..++.++||||||++++++++|+.||...... .......+ .......     .+.+            ....
T Consensus       184 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~------------~~~~  246 (296)
T 3uzp_A          184 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-----IEVL------------CKGY  246 (296)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-----HHHH------------TTTS
T ss_pred             hhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCc-----hHHH------------HhhC
Confidence            56667777899999999999999999999998753221 11111111 1111000     0000            0123


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      +..+..++..||+.+|.+||++.+++..|+.+.....
T Consensus       247 ~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~  283 (296)
T 3uzp_A          247 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence            4568899999999999999999999999999877653

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.58  E-value=9.8e-16  Score=101.77  Aligned_cols=98  Identities=11%  Similarity=0.090  Sum_probs=67.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCC-CcHHH-HHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD-LNLHR-FARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+..++.++||||||++++++++|+.||....... ..... ......... .    +..            ....
T Consensus       184 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-~----~~~------------~~~~  246 (296)
T 4hgt_A          184 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP-I----EVL------------CKGY  246 (296)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC-H----HHH------------TTTS
T ss_pred             hHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch-h----hhh------------hccC
Confidence            566677788999999999999999999999987532211 11111 111110000 0    000            0022


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      +..+..++..||+.+|.+||++.++++.|+.+..+..
T Consensus       247 ~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~  283 (296)
T 4hgt_A          247 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  283 (296)
T ss_dssp             CHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence            4578899999999999999999999999999987754

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.57  E-value=5.4e-16  Score=104.90  Aligned_cols=91  Identities=21%  Similarity=0.245  Sum_probs=64.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||+++||+++ |+.||.....  ..+...+....            ....+        ..+.
T Consensus       188 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~------------~~~~~--------~~~~  245 (327)
T 3poz_A          188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGE------------RLPQP--------PICT  245 (327)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTC------------CCCCC--------TTBC
T ss_pred             hHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCC------------CCCCC--------ccCC
Confidence            566677789999999999999999999 9999864321  11222221111            00000        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+...
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~  279 (327)
T 3poz_A          246 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD  279 (327)
T ss_dssp             HHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence            5678899999999999999999999999887654

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.57  E-value=1.7e-15  Score=101.63  Aligned_cols=95  Identities=23%  Similarity=0.310  Sum_probs=66.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||||++++|+++|+.||......   .....+.......     +....            ....
T Consensus       172 PE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~---~~~~~~~~~~~~~-----~~~~~------------~~~~  231 (307)
T 2eva_A          172 PEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP---AFRIMWAVHNGTR-----PPLIK------------NLPK  231 (307)
T ss_dssp             HHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS---HHHHHHHHHTTCC-----CCCBT------------TCCH
T ss_pred             hhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc---HHHHHHHHhcCCC-----CCccc------------ccCH
Confidence            57777788999999999999999999999998643221   1111111111110     11111            2334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      .+.+++.+||+.+|.+||++.+++..|+.+.....
T Consensus       232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~  266 (307)
T 2eva_A          232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFP  266 (307)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCC
T ss_pred             HHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhcc
Confidence            67889999999999999999999999998866543

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.56  E-value=1.2e-15  Score=102.21  Aligned_cols=96  Identities=22%  Similarity=0.284  Sum_probs=66.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++||+++|..|+..........        ..............            .++.
T Consensus       191 PE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~------------~~~~  250 (310)
T 3s95_A          191 PEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDF--------GLNVRGFLDRYCPP------------NCPP  250 (310)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTS--------SBCHHHHHHHTCCT------------TCCT
T ss_pred             HHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHH--------hhhhhccccccCCC------------CCCH
Confidence            566777788999999999999999999998875432111100        00000001111111            2334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      .+..++..||+.+|.+||++.++++.|+.+......
T Consensus       251 ~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~  286 (310)
T 3s95_A          251 SFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG  286 (310)
T ss_dssp             THHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence            678899999999999999999999999999877653

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.56  E-value=3.7e-15  Score=99.64  Aligned_cols=96  Identities=22%  Similarity=0.316  Sum_probs=65.0

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--CccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--DHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      +.++.++||||||++++++++|..|+....... .+..+......  ..+...++..+..         .+......+..
T Consensus       209 ~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~l~~  278 (307)
T 2nru_A          209 GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQ-LLLDIKEEIEDEEKTIEDYIDKKMND---------ADSTSVEAMYS  278 (307)
T ss_dssp             TEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSS-BTTHHHHHHHTTSCCHHHHSCSSCSC---------CCHHHHHHHHH
T ss_pred             CCCCccchhHHHHHHHHHHHHCCCCcccCcchH-HHHHHHHHhhhhhhhhhhhccccccc---------cchHHHHHHHH
Confidence            457889999999999999999999987543222 12222211111  1222223332221         12366778999


Q ss_pred             HhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           85 IGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ++..||+.+|.+||++.+++..|+.+..
T Consensus       279 li~~cl~~~p~~Rps~~~l~~~L~~l~~  306 (307)
T 2nru_A          279 VASQCLHEKKNKRPDIKKVQQLLQEMTA  306 (307)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred             HHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence            9999999999999999999999998754

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.56  E-value=9.8e-16  Score=111.51  Aligned_cols=93  Identities=19%  Similarity=0.239  Sum_probs=67.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||++|||++ |+.||....  ...+...+..   +.       ++  ..        +..+.
T Consensus       508 PE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~---~~-------~~--~~--------p~~~~  565 (613)
T 2ozo_A          508 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQ---GK-------RM--EC--------PPECP  565 (613)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHT---TC-------CC--CC--------CTTCC
T ss_pred             HhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHc---CC-------CC--CC--------CCcCC
Confidence            566777889999999999999999998 999986432  1112222211   10       00  01        11345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++..||+.+|.+||++.+++..|+.+..+..
T Consensus       566 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~  601 (613)
T 2ozo_A          566 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA  601 (613)
T ss_dssp             HHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhc
Confidence            678899999999999999999999999999887754

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.56  E-value=5.9e-16  Score=105.56  Aligned_cols=93  Identities=17%  Similarity=0.175  Sum_probs=65.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++|+++ |..||....... .+...+......        ...            ....
T Consensus       264 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~~~~~~~~~~~--------~~~------------~~~~  322 (359)
T 3vhe_A          264 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTRM--------RAP------------DYTT  322 (359)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHHTCCC--------CCC------------TTCC
T ss_pred             hhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HHHHHHHcCCCC--------CCC------------CCCC
Confidence            566667788999999999999999998 999986432111 111111111000        000            0233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++..||+.+|.+||++.+++..|+.+.+..
T Consensus       323 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~  357 (359)
T 3vhe_A          323 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  357 (359)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence            46788999999999999999999999999988764

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=99.55  E-value=1.6e-15  Score=103.65  Aligned_cols=85  Identities=21%  Similarity=0.209  Sum_probs=59.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....|+.++||||+||++|||++|+.||....  .......+.....        +.+..          +...+.
T Consensus       239 PEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~--------~~~~~----------~~~~s~  298 (346)
T 4fih_A          239 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP--------PRLKN----------LHKVSP  298 (346)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSC--------CCCSC----------GGGSCH
T ss_pred             HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC--------CCCCc----------cccCCH
Confidence            688888889999999999999999999999986321  1111122211111        11110          113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..||.+|||+.+++.
T Consensus       299 ~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          299 SLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhc
Confidence            6788999999999999999998864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.55  E-value=8.2e-16  Score=103.42  Aligned_cols=93  Identities=16%  Similarity=0.189  Sum_probs=64.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++|++++|+.||.....  ......+.  .....     ..+..            ....
T Consensus       208 PE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~--~~~~~~~~--~~~~~-----~~~~~------------~~~~  266 (309)
T 3p86_A          208 PEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP--AQVVAAVG--FKCKR-----LEIPR------------NLNP  266 (309)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH--HHHHHHHH--HSCCC-----CCCCT------------TSCH
T ss_pred             hhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHH--hcCCC-----CCCCc------------cCCH
Confidence            5777778889999999999999999999999864221  11111110  01000     01111            3345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      .+.+++..||+.+|.+||++.++++.|+.+..+.
T Consensus       267 ~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~  300 (309)
T 3p86_A          267 QVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA  300 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence            6789999999999999999999999999887654

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.55  E-value=1.6e-15  Score=103.53  Aligned_cols=103  Identities=13%  Similarity=0.057  Sum_probs=69.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++||+++|+.||.........+........ ..............           ....
T Consensus       237 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~~~~  304 (352)
T 2jii_A          237 MDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV-DKPGPFVGPCGHWI-----------RPSE  304 (352)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH-HSCCCEECTTSCEE-----------CCCH
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc-CChhhhhhhccccC-----------CCcH
Confidence            56666778899999999999999999999998754322222222221111 11111111111000           1235


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      .+..++..||+.+|.+||++.+++..|+.+.....
T Consensus       305 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~  339 (352)
T 2jii_A          305 TLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR  339 (352)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence            67899999999999999999999999999887754

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.55  E-value=8.5e-16  Score=102.23  Aligned_cols=99  Identities=9%  Similarity=-0.059  Sum_probs=66.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCC-CcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD-LNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++|+++|+.||....... ......+.......    ..+.+            ....+
T Consensus       187 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~----~~~~~------------~~~~~  250 (298)
T 1csn_A          187 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST----PLREL------------CAGFP  250 (298)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS----CHHHH------------TTTSC
T ss_pred             chhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc----cHHHH------------HhhCc
Confidence            566677788999999999999999999999987532111 11111111000000    00000            00234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+..++..||+.+|.+||++.+|...|+.+.....
T Consensus       251 ~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~  286 (298)
T 1csn_A          251 EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN  286 (298)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence            578899999999999999999999999999887643

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.55  E-value=8.1e-16  Score=103.09  Aligned_cols=95  Identities=17%  Similarity=0.196  Sum_probs=65.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..|+....... .+...+.....        .....            ...
T Consensus       219 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~~~~--------~~~~~------------~~~  277 (316)
T 2xir_A          219 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEGTR--------MRAPD------------YTT  277 (316)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH-HHHHHHHHTCC--------CCCCT------------TCC
T ss_pred             chhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH-HHHHHhccCcc--------CCCCC------------CCC
Confidence            566666778999999999999999998 999986432111 11111111100        00000            233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.+....
T Consensus       278 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~  314 (316)
T 2xir_A          278 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ  314 (316)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcc
Confidence            4678899999999999999999999999999877543

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.55  E-value=1.7e-15  Score=100.72  Aligned_cols=89  Identities=21%  Similarity=0.358  Sum_probs=59.6

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...++.++||||||++++++++|+.||...... ..+...+......       +....         ....++..+..+
T Consensus       199 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~-------~~~~~---------~~~~~~~~l~~l  261 (289)
T 3og7_A          199 SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIEMVGRGSLS-------PDLSK---------VRSNCPKRMKRL  261 (289)
T ss_dssp             -CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH-HHHHHHHHHTSCC-------CCTTS---------SCTTSCHHHHHH
T ss_pred             CCCCCcccchHHHHHHHHHHHHCCCCccccchH-HHHHHHhcccccC-------cchhh---------ccccCCHHHHHH
Confidence            556788999999999999999999998643211 1111111111110       00000         001334678899


Q ss_pred             hhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           86 GVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      +..||+.+|.+||++.+++..|+.+.
T Consensus       262 i~~~l~~~p~~Rps~~ell~~L~~l~  287 (289)
T 3og7_A          262 MAECLKKKRDERPSFPRILAEIEELA  287 (289)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHccCChhhCCCHHHHHHHHHHHh
Confidence            99999999999999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.55  E-value=4.5e-16  Score=109.64  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++|||++ |+.||....  ...+...+.....          +  ..+        ..++
T Consensus       354 PE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~--~~~~~~~i~~~~~----------~--~~~--------~~~~  411 (454)
T 1qcf_A          354 PEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYR----------M--PRP--------ENCP  411 (454)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHHTCC----------C--CCC--------TTSC
T ss_pred             HHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCCC----------C--CCC--------CCCC
Confidence            566777889999999999999999999 999986422  1111111111110          0  001        1344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++..||+.+|.+|||+.+|+..|+.+..
T Consensus       412 ~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~  444 (454)
T 1qcf_A          412 EELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT  444 (454)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence            578899999999999999999999999987653

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.55  E-value=3.4e-16  Score=104.24  Aligned_cols=100  Identities=18%  Similarity=0.227  Sum_probs=64.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc--------cccccccccccCCCCcchh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH--------VVYIVDPILLNDGKGETRI   72 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~   72 (127)
                      ||.+.+..++.++||||||+++||+++|..|+....      ..+........        ....+........      
T Consensus       186 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  253 (295)
T 3ugc_A          186 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR------  253 (295)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH------HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC------
T ss_pred             cHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh------HHHHhhhcCccccchhHHHHHHHHhccCcCCC------
Confidence            566666778999999999999999999998875321      01110000000        0000000000000      


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                        +..++..+..++..||+.+|.+|||+.+++..|+.+....
T Consensus       254 --~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l  293 (295)
T 3ugc_A          254 --PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNM  293 (295)
T ss_dssp             --CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred             --CcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhc
Confidence              1134567889999999999999999999999999987654

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.55  E-value=2.5e-15  Score=99.66  Aligned_cols=91  Identities=20%  Similarity=0.350  Sum_probs=61.8

Q ss_pred             CCcc--cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYG--LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~--~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+  ....++.++||||||++++++++|+.||................   ...    .+.+..            ..
T Consensus       195 PE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~---~~~----~~~~~~------------~~  255 (287)
T 4f0f_A          195 PETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIRE---EGL----RPTIPE------------DC  255 (287)
T ss_dssp             GGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHH---SCC----CCCCCT------------TS
T ss_pred             chhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhc---cCC----CCCCCc------------cc
Confidence            6766  34557889999999999999999999986433222111111111   100    111111            33


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ...+.+++..||+.+|.+||++.++++.|+++
T Consensus       256 ~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          256 PPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            45778999999999999999999999998753

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.55  E-value=1.1e-15  Score=103.38  Aligned_cols=94  Identities=19%  Similarity=0.202  Sum_probs=65.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++||++ |..|+..... ...+...+......            ..+.        ...
T Consensus       235 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~~------------~~~~--------~~~  293 (333)
T 2i1m_A          235 PESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-NSKFYKLVKDGYQM------------AQPA--------FAP  293 (333)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCS-SHHHHHHHHHTCCC------------CCCT--------TCC
T ss_pred             HHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccch-hHHHHHHHhcCCCC------------CCCC--------CCC
Confidence            556666778999999999999999998 8888764321 11111222211110            0000        223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.....
T Consensus       294 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~  329 (333)
T 2i1m_A          294 KNIYSIMQACWALEPTHRPTFQQICSFLQEQAQEDR  329 (333)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhhh
Confidence            567889999999999999999999999998877654

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.54  E-value=7.9e-16  Score=103.02  Aligned_cols=93  Identities=18%  Similarity=0.202  Sum_probs=65.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |+.|+...... ..+.........        .....            ...
T Consensus       216 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~--------~~~~~------------~~~  274 (313)
T 1t46_A          216 PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVD-SKFYKMIKEGFR--------MLSPE------------HAP  274 (313)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSS-HHHHHHHHHTCC--------CCCCT------------TSC
T ss_pred             hHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccch-hHHHHHhccCCC--------CCCcc------------cCC
Confidence            566666778999999999999999998 99898643211 111111111111        00000            234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++..||+.+|.+||++.+++..|+++..+.
T Consensus       275 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  309 (313)
T 1t46_A          275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES  309 (313)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence            56789999999999999999999999999888764

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.54  E-value=9.5e-16  Score=105.62  Aligned_cols=91  Identities=18%  Similarity=0.257  Sum_probs=63.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++||||||+++||+++ |+.||....  ...+...+.   ..         .....+        ..+.
T Consensus       219 PE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~--~~~~~~~i~---~~---------~~~~~~--------~~~~  276 (373)
T 2qol_A          219 PEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMS--NQDVIKAVD---EG---------YRLPPP--------MDCP  276 (373)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCC--HHHHHHHHH---TT---------EECCCC--------TTCB
T ss_pred             hhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cC---------CCCCCC--------cccc
Confidence            566667788999999999999999998 999985321  111111111   11         000000        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+...
T Consensus       277 ~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~  310 (373)
T 2qol_A          277 AALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN  310 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence            5778999999999999999999999999988764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.54  E-value=1.1e-15  Score=101.71  Aligned_cols=96  Identities=18%  Similarity=0.154  Sum_probs=67.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++++++ |+.||.....  ..+...+.   ....     +....            ...
T Consensus       189 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~---~~~~-----~~~~~------------~~~  246 (291)
T 1xbb_A          189 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLE---KGER-----MGCPA------------GCP  246 (291)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHH---TTCC-----CCCCT------------TCC
T ss_pred             hHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHH---cCCC-----CCCCC------------CCC
Confidence            455555667889999999999999999 9999864221  11111111   1100     00111            334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE  118 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~  118 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.....+..
T Consensus       247 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~~~~  285 (291)
T 1xbb_A          247 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNEG  285 (291)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhhcc
Confidence            578899999999999999999999999999988876554

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.54  E-value=6.8e-15  Score=98.54  Aligned_cols=99  Identities=18%  Similarity=0.184  Sum_probs=66.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++||||||++++++++|+.|+....   ..................     ...           ....
T Consensus       205 PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~~-----~~~-----------~~~~  265 (310)
T 2wqm_A          205 PERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEQCDYPPL-----PSD-----------HYSE  265 (310)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC------CCHHHHHHHHHTTCSCCC-----CTT-----------TSCH
T ss_pred             hHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc---hhHHHHHHHhhcccCCCC-----ccc-----------ccCH
Confidence            566677788999999999999999999999985321   122222221111111110     000           2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhhh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE  118 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~  118 (127)
                      .+..++..||+.+|.+||++.+++..|+++........
T Consensus       266 ~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~~  303 (310)
T 2wqm_A          266 ELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASSL  303 (310)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhhh
Confidence            67899999999999999999999999999987765443

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.54  E-value=2.1e-15  Score=99.77  Aligned_cols=92  Identities=17%  Similarity=0.129  Sum_probs=64.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |+.||....  .......+......        ...            ....
T Consensus       183 PE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~--~~~~~~~~~~~~~~--------~~~------------~~~~  240 (281)
T 3cc6_A          183 PESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE--NKDVIGVLEKGDRL--------PKP------------DLCP  240 (281)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC--GGGHHHHHHHTCCC--------CCC------------TTCC
T ss_pred             chhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCC--hHHHHHHHhcCCCC--------CCC------------CCCC
Confidence            455666778999999999999999998 999985322  11122222111100        000            0233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.+..
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~  275 (281)
T 3cc6_A          241 PVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQME  275 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhh
Confidence            56789999999999999999999999999887764

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.53  E-value=7.8e-15  Score=99.19  Aligned_cols=98  Identities=9%  Similarity=0.022  Sum_probs=61.1

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCC-------------cHHHHHHhhcCCccccccccccccCCCCcchhhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL-------------NLHRFARMALPDHVVYIVDPILLNDGKGETRINS   74 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   74 (127)
                      .++.++|||||||++|||++|..|+........             .................+......          
T Consensus       211 ~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  280 (336)
T 3g2f_A          211 SALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKE----------  280 (336)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCC----------
T ss_pred             ccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCccccc----------
Confidence            456789999999999999999776543211110             001111100111111111111111          


Q ss_pred             HHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           75 RLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        75 ~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      .......+.+++..||+.+|.+|||+.++++.|+.++....
T Consensus       281 ~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~  321 (336)
T 3g2f_A          281 NSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWE  321 (336)
T ss_dssp             CSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCC
T ss_pred             ccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHH
Confidence            11456789999999999999999999999999999886654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.53  E-value=6.1e-16  Score=101.52  Aligned_cols=90  Identities=18%  Similarity=0.231  Sum_probs=59.6

Q ss_pred             CCcccCCCCCC---cccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVST---NGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~---~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+.+...+.   ++||||||+++||+++|+.||....     ............    ..+.+..            .
T Consensus       177 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~----~~~~~~~------------~  235 (271)
T 3kmu_A          177 PEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLS-----NMEIGMKVALEG----LRPTIPP------------G  235 (271)
T ss_dssp             HHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSC-----HHHHHHHHHHSC----CCCCCCT------------T
T ss_pred             hhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccC-----hHHHHHHHHhcC----CCCCCCC------------C
Confidence            45555444443   7999999999999999999986422     111111111110    0111111            2


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ....+..++..||+.+|.+||++.+++..|+.+.
T Consensus       236 ~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~  269 (271)
T 3kmu_A          236 ISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQ  269 (271)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            3456789999999999999999999999998774

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.53  E-value=9e-16  Score=104.17  Aligned_cols=95  Identities=20%  Similarity=0.186  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..||..... ...+...+.....            ...+        ....
T Consensus       243 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-~~~~~~~~~~~~~------------~~~~--------~~~~  301 (344)
T 1rjb_A          243 PESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANFYKLIQNGFK------------MDQP--------FYAT  301 (344)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHHHHHTTCC------------CCCC--------TTCC
T ss_pred             HHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc-HHHHHHHHhcCCC------------CCCC--------CCCC
Confidence            566667788999999999999999998 9999864321 1111122211110            0000        0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+..++..||+.+|.+||++.+++..|..+.....+
T Consensus       302 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~~  338 (344)
T 1rjb_A          302 EEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEE  338 (344)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-----
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHHH
Confidence            5678899999999999999999999999988766543

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.53  E-value=7.8e-17  Score=108.60  Aligned_cols=105  Identities=14%  Similarity=0.097  Sum_probs=66.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc---C-CccccccccccccCCCCcchhhhHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL---P-DHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||.+.+..++.++||||||++++++++|+.|+......   .........   . ......+........        +.
T Consensus       206 PE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~  274 (318)
T 3lxp_A          206 PECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK---FLELIGIAQGQMTVLRLTELLERGERLPR--------PD  274 (318)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH---HHHHHCSCCHHHHHHHHHHHHHTTCCCCC--------CT
T ss_pred             hHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh---hhhhhcccccchhHHHHHHHHhcccCCCC--------Cc
Confidence            45555566788999999999999999999997532110   000000000   0 000011111111111        11


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      .+...+.+++..||+.+|.+||++.+++..|+.+..+...
T Consensus       275 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~  314 (318)
T 3lxp_A          275 KCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQG  314 (318)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC
T ss_pred             cccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhcc
Confidence            3446788999999999999999999999999999887654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.53  E-value=2.8e-15  Score=101.56  Aligned_cols=94  Identities=18%  Similarity=0.202  Sum_probs=64.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||+++|++++ |..||....     ..........+....     ...            .+.
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~~~-----~~~------------~~~  302 (343)
T 1luf_A          245 PESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-----HEEVIYYVRDGNILA-----CPE------------NCP  302 (343)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCCCC-----CCT------------TCC
T ss_pred             hhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCC-----hHHHHHHHhCCCcCC-----CCC------------CCC
Confidence            566666788999999999999999999 998986321     111111111111110     001            334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+.+++..||+.+|.+||++.+++..|+.+......
T Consensus       303 ~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~~  339 (343)
T 1luf_A          303 LELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAEG  339 (343)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC----
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhhh
Confidence            5678999999999999999999999999998766543

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.53  E-value=2.8e-15  Score=99.24  Aligned_cols=92  Identities=14%  Similarity=0.139  Sum_probs=64.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||||++++|+++ |..||.....  ......+..   ...     ....            ...+
T Consensus       186 PE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~--~~~~~~i~~---~~~-----~~~~------------~~~~  243 (281)
T 1mp8_A          186 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIEN---GER-----LPMP------------PNCP  243 (281)
T ss_dssp             HHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHT---TCC-----CCCC------------TTCC
T ss_pred             hhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCH--HHHHHHHHc---CCC-----CCCC------------CCCC
Confidence            455666778899999999999999997 8889864321  112221111   100     0010            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+....
T Consensus       244 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  278 (281)
T 1mp8_A          244 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE  278 (281)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence            56788999999999999999999999999988764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.53  E-value=1.1e-15  Score=103.32  Aligned_cols=92  Identities=15%  Similarity=0.195  Sum_probs=64.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++|+++ |..||....     ............         ....+        ..+.
T Consensus       223 PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~-----~~~~~~~~~~~~---------~~~~~--------~~~~  280 (325)
T 3kul_A          223 PEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMT-----NRDVISSVEEGY---------RLPAP--------MGCP  280 (325)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSC-----HHHHHHHHHTTC---------CCCCC--------TTCC
T ss_pred             HhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHcCC---------CCCCC--------CCcC
Confidence            455666778899999999999999999 999985321     111111111110         00000        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+....
T Consensus       281 ~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~  315 (325)
T 3kul_A          281 HALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP  315 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence            57889999999999999999999999999887653

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.53  E-value=2.9e-15  Score=98.96  Aligned_cols=91  Identities=19%  Similarity=0.189  Sum_probs=64.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |+.|+.....  ..+...+.   ...     ......            ...
T Consensus       183 PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~---~~~-----~~~~~~------------~~~  240 (278)
T 1byg_A          183 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVE---KGY-----KMDAPD------------GCP  240 (278)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHT---TTC-----CCCCCT------------TCC
T ss_pred             HHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHh---cCC-----CCCCcc------------cCC
Confidence            556666778999999999999999998 9999864221  11111111   110     001111            334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.++++.|+.+...
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~  274 (278)
T 1byg_A          241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  274 (278)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence            5778999999999999999999999999988765

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.53  E-value=7.5e-16  Score=101.32  Aligned_cols=89  Identities=24%  Similarity=0.309  Sum_probs=60.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.||....     .............    ......            ....
T Consensus       183 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~----~~~~~~------------~~~~  241 (271)
T 3dtc_A          183 PEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID-----GLAVAYGVAMNKL----ALPIPS------------TCPE  241 (271)
T ss_dssp             HHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC-----HHHHHHHHHTSCC----CCCCCT------------TCCH
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHhhhcCCC----CCCCCc------------ccCH
Confidence            566666778999999999999999999999986321     1111111111100    000111            3345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      .+..++..||+.+|.+||++.++++.|+.+
T Consensus       242 ~~~~li~~~l~~~p~~Rps~~e~l~~L~~l  271 (271)
T 3dtc_A          242 PFAKLMEDCWNPDPHSRPSFTNILDQLTTI  271 (271)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred             HHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence            688999999999999999999999998753

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.53  E-value=2.7e-15  Score=100.63  Aligned_cols=93  Identities=16%  Similarity=0.245  Sum_probs=65.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++++++ |..|+....  ...+...+.....        +...            ....
T Consensus       218 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~--~~~~~~~~~~~~~--------~~~~------------~~~~  275 (313)
T 3brb_A          218 IESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQ--NHEMYDYLLHGHR--------LKQP------------EDCL  275 (313)
T ss_dssp             HHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCC--------CCCB------------TTCC
T ss_pred             chhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCC--HHHHHHHHHcCCC--------CCCC------------cccc
Confidence            455667778999999999999999999 888875322  1112222111100        0000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+..+..
T Consensus       276 ~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp  311 (313)
T 3brb_A          276 DELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP  311 (313)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence            567899999999999999999999999999887643

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.52  E-value=1.9e-15  Score=110.45  Aligned_cols=92  Identities=18%  Similarity=0.171  Sum_probs=66.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||++|||++ |+.||.....  ..+...+.   .+.         ....+        ..++
T Consensus       541 PE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~---~~~---------~~~~p--------~~~~  598 (635)
T 4fl3_A          541 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLE---KGE---------RMGCP--------AGCP  598 (635)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHH---TTC---------CCCCC--------TTCC
T ss_pred             hhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---cCC---------CCCCC--------CCCC
Confidence            566777789999999999999999998 9999864221  11111111   110         00011        1344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++..||+.+|.+||++.+|+..|+.+....
T Consensus       599 ~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l  633 (635)
T 4fl3_A          599 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  633 (635)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            67889999999999999999999999999887654

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.52  E-value=1.1e-15  Score=108.72  Aligned_cols=91  Identities=18%  Similarity=0.221  Sum_probs=64.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++|||++ |..||....  ...+...+...+            ....+        ..+.
T Consensus       388 PE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~------------~~~~~--------~~~~  445 (495)
T 1opk_A          388 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDY------------RMERP--------EGCP  445 (495)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTC------------CCCCC--------TTCC
T ss_pred             HhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHcCC------------CCCCC--------CCCC
Confidence            566666778999999999999999999 888886432  112222221111            00111        1344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+...
T Consensus       446 ~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~  479 (495)
T 1opk_A          446 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  479 (495)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred             HHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence            5788999999999999999999999999987543

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.52  E-value=2.5e-15  Score=99.80  Aligned_cols=95  Identities=19%  Similarity=0.198  Sum_probs=66.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++++++ |+.||....  ...+...+..   ...     +...            ...+
T Consensus       182 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~---~~~-----~~~~------------~~~~  239 (287)
T 1u59_A          182 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQ---GKR-----MECP------------PECP  239 (287)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHT---TCC-----CCCC------------TTCC
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhc---CCc-----CCCC------------CCcC
Confidence            455555678889999999999999998 999986432  1111121111   100     0011            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      ..+..++..||+.+|.+||++.+++..|..+..+....
T Consensus       240 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~~  277 (287)
T 1u59_A          240 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  277 (287)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCCc
Confidence            57889999999999999999999999999998886543

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.52  E-value=8.9e-16  Score=104.52  Aligned_cols=99  Identities=13%  Similarity=0.067  Sum_probs=63.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++||+++|+.||................... .....+......           ...+.
T Consensus       229 PE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-----------~~~~~  296 (345)
T 2v62_A          229 LDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLD-ELPQSVLKWAPS-----------GSSCC  296 (345)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHH-TTTHHHHHHSCT-----------TSCCH
T ss_pred             HHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcc-cccHHHHhhccc-----------cccHH
Confidence            566667778999999999999999999999986432221111111111110 011100000000           02345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      .+..++..||..+|.+||++.+++..|+.+.
T Consensus       297 ~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  327 (345)
T 2v62_A          297 EIAQFLVCAHSLAYDEKPNYQALKKILNPHG  327 (345)
T ss_dssp             HHHHHHHHHHTCCTTCCCCHHHHHHHHCTTC
T ss_pred             HHHHHHHHHhhcCcccCCCHHHHHHHHhccC
Confidence            7889999999999999999999999988653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.52  E-value=2.7e-15  Score=101.60  Aligned_cols=92  Identities=20%  Similarity=0.214  Sum_probs=64.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++|+++ |+.||.....  ..+...+....            ....+        ....
T Consensus       188 PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~------------~~~~~--------~~~~  245 (327)
T 3lzb_A          188 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGE------------RLPQP--------PICT  245 (327)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTC------------CCCCC--------TTBC
T ss_pred             HHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCC------------CCCCC--------ccCC
Confidence            456666778999999999999999999 9999864321  11222221111            00000        1234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|..+....
T Consensus       246 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  280 (327)
T 3lzb_A          246 IDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP  280 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence            46788999999999999999999999999887543

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.52  E-value=1.4e-15  Score=107.12  Aligned_cols=90  Identities=21%  Similarity=0.262  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||+++||+++ |+.||....     ..+.......+.       ++  ..        +..++
T Consensus       350 PE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~-----~~~~~~~i~~~~-------~~--~~--------~~~~~  407 (452)
T 1fmk_A          350 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGY-------RM--PC--------PPECP  407 (452)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC-------CC--CC--------CTTSC
T ss_pred             HhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCC-------CC--CC--------CCCCC
Confidence            566677789999999999999999999 899986321     111111111110       00  00        11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++..||+.+|.+|||+.+++..|+.+..
T Consensus       408 ~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~  440 (452)
T 1fmk_A          408 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  440 (452)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence            578899999999999999999999999987754

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.52  E-value=1e-14  Score=100.65  Aligned_cols=94  Identities=19%  Similarity=0.286  Sum_probs=66.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++++++ |..|+....     ..............     ....            .+.
T Consensus       262 PE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~-----~~~~------------~~~  319 (382)
T 3tt0_A          262 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP-----VEELFKLLKEGHRM-----DKPS------------NCT  319 (382)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-----HHHHHHHHHTTCCC-----CCCS------------SCC
T ss_pred             HHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCC-----CCCc------------cCC
Confidence            566777788999999999999999999 999975321     11121111111100     0001            234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      ..+..++..||+.+|.+||++.++++.|+.+......
T Consensus       320 ~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~  356 (382)
T 3tt0_A          320 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSN  356 (382)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            5678999999999999999999999999999876543

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.52  E-value=7.8e-15  Score=100.80  Aligned_cols=93  Identities=18%  Similarity=0.236  Sum_probs=65.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||+++||++ |..||....  ...+...+.   .+...     ...            ..+.
T Consensus       255 PE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--~~~~~~~i~---~~~~~-----~~~------------~~~~  312 (367)
T 3l9p_A          255 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFVT---SGGRM-----DPP------------KNCP  312 (367)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH---TTCCC-----CCC------------TTCC
T ss_pred             HHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCCC-----CCC------------ccCC
Confidence            566667789999999999999999998 998986321  111111111   11000     000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+..++..||+.+|.+||++.++++.|+.+.....
T Consensus       313 ~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~  348 (367)
T 3l9p_A          313 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD  348 (367)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence            567899999999999999999999999998876543

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.52  E-value=1.9e-15  Score=101.21  Aligned_cols=91  Identities=21%  Similarity=0.298  Sum_probs=63.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||+++++|++ |..|+.....  ..+...+.....        ....            ....
T Consensus       221 PE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~--------~~~~------------~~~~  278 (314)
T 2ivs_A          221 IESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP--ERLFNLLKTGHR--------MERP------------DNCS  278 (314)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCC--------CCCC------------TTCC
T ss_pred             hhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHhhcCCc--------CCCC------------ccCC
Confidence            455556668899999999999999999 9999864321  112222211110        0000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+..+
T Consensus       279 ~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~  312 (314)
T 2ivs_A          279 EEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK  312 (314)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence            5778999999999999999999999999988653

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.52  E-value=3.7e-15  Score=100.36  Aligned_cols=93  Identities=16%  Similarity=0.261  Sum_probs=64.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++++++ |..|+.....  ......+.   ....     .    ..        +....
T Consensus       208 PE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~---~~~~-----~----~~--------~~~~~  265 (323)
T 3qup_A          208 LESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLI---GGNR-----L----KQ--------PPECM  265 (323)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHH---TTCC-----C----CC--------CTTCC
T ss_pred             chhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHHHHh---cCCC-----C----CC--------CCccC
Confidence            455666778999999999999999999 8888864221  11111111   1100     0    00        01334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++..||+.+|.+||++.+++..|+.+....-
T Consensus       266 ~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~  301 (323)
T 3qup_A          266 EEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS  301 (323)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence            567899999999999999999999999999877653

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.51  E-value=5.7e-15  Score=97.85  Aligned_cols=96  Identities=17%  Similarity=0.201  Sum_probs=67.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..|+....  .......+.....            ...+        ...+
T Consensus       181 PE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~~~~~~------------~~~~--------~~~~  238 (288)
T 3kfa_A          181 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYR------------MERP--------EGCP  238 (288)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCC------------CCCC--------TTCC
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhccCC------------CCCC--------CCCC
Confidence            556666778999999999999999999 888876422  1112222211110            0000        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE  118 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~  118 (127)
                      ..+..++..||+.+|.+||++.++++.|+.+.......+
T Consensus       239 ~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~~~~~  277 (288)
T 3kfa_A          239 EKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD  277 (288)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhccccc
Confidence            567899999999999999999999999999988765443

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=2.2e-15  Score=103.86  Aligned_cols=95  Identities=16%  Similarity=0.304  Sum_probs=66.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||+++||+++ |..||....  .......+.....     ...               +..++
T Consensus       265 PE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~--~~~~~~~~~~~~~-----~~~---------------p~~~~  322 (373)
T 3c1x_A          265 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGRR-----LLQ---------------PEYCP  322 (373)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC--SSCHHHHHHTTCC-----CCC---------------CTTCC
T ss_pred             hHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCC--HHHHHHHHHcCCC-----CCC---------------CCCCC
Confidence            566667788999999999999999999 666765322  1122222211100     000               01234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+.....+.
T Consensus       323 ~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~~~  360 (373)
T 3c1x_A          323 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  360 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcccc
Confidence            56789999999999999999999999999998776543

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.51  E-value=8.5e-15  Score=98.75  Aligned_cols=89  Identities=19%  Similarity=0.198  Sum_probs=57.5

Q ss_pred             CCcc---cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYG---LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~---~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+   ....++.++||||||++++++++|+.||......     .            .+..........        .
T Consensus       219 PE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-----~------------~~~~~~~~~~~~--------~  273 (337)
T 3ll6_A          219 PEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL-----R------------IVNGKYSIPPHD--------T  273 (337)
T ss_dssp             -----CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------------------------CCCCTTC--------C
T ss_pred             hhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHH-----H------------hhcCcccCCccc--------c
Confidence            5666   4567889999999999999999999998632110     0            000000000000        1


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ....+..++..||+.+|.+||++.+++..|..+....
T Consensus       274 ~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~  310 (337)
T 3ll6_A          274 QYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAAR  310 (337)
T ss_dssp             SSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred             cchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhcc
Confidence            1234678999999999999999999999999887654

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=99.51  E-value=5.8e-15  Score=103.16  Aligned_cols=85  Identities=21%  Similarity=0.202  Sum_probs=59.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..|+.++||||+||++|||++|+.||....  .......+.....        +.+...          .....
T Consensus       316 PEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~--------~~~~~~----------~~~s~  375 (423)
T 4fie_A          316 PELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLP--------PRLKNL----------HKVSP  375 (423)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCC--------CCCSCT----------TSSCH
T ss_pred             HHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCC--------CCCccc----------ccCCH
Confidence            678888899999999999999999999999986321  1111222211111        111110          12345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..||.+|||+.+++.
T Consensus       376 ~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          376 SLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhc
Confidence            6788999999999999999998864

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.51  E-value=7.6e-15  Score=97.63  Aligned_cols=95  Identities=23%  Similarity=0.309  Sum_probs=64.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|..|+.... +...+...+......            ..+        .....
T Consensus       197 PE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~------------~~~--------~~~~~  255 (298)
T 3pls_A          197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRL------------PQP--------EYCPD  255 (298)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCC------------CCC--------TTCCH
T ss_pred             hhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCC------------CCC--------ccchH
Confidence            455666778999999999999999999666543211 111122222111100            000        02335


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILLK  116 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~  116 (127)
                      .+..++..||+.+|.+|||+.+++..|+.+......
T Consensus       256 ~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~  291 (298)
T 3pls_A          256 SLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG  291 (298)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence            678999999999999999999999999999887543

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.50  E-value=4.6e-15  Score=98.17  Aligned_cols=91  Identities=16%  Similarity=0.233  Sum_probs=63.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||+|++++++++ |+.||.....     ..........     .......            ...
T Consensus       190 PE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~-----~~~~~~~------------~~~  247 (283)
T 3gen_A          190 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN-----SETAEHIAQG-----LRLYRPH------------LAS  247 (283)
T ss_dssp             HHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHHHHTT-----CCCCCCT------------TCC
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh-----hHHHHHHhcc-----cCCCCCC------------cCC
Confidence            456666778999999999999999998 9999864221     1111111111     0000000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|..+...
T Consensus       248 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~  281 (283)
T 3gen_A          248 EKVYTIMYSCWHEKADERPTFKILLSNILDVMDE  281 (283)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence            4678899999999999999999999999988764

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.50  E-value=5.2e-15  Score=100.36  Aligned_cols=92  Identities=16%  Similarity=0.224  Sum_probs=64.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++|+++ |+.||....     ..........+..     ...    +        ....
T Consensus       219 PE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~~~~~~-----~~~----~--------~~~~  276 (333)
T 1mqb_A          219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-----NHEVMKAINDGFR-----LPT----P--------MDCP  276 (333)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTCC-----CCC----C--------TTCB
T ss_pred             chhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCC-----HHHHHHHHHCCCc-----CCC----c--------ccCC
Confidence            566667788999999999999999998 999985321     1111111111100     000    0        0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+....
T Consensus       277 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~  311 (333)
T 1mqb_A          277 SAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP  311 (333)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence            56789999999999999999999999999887654

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.49  E-value=3.6e-15  Score=98.07  Aligned_cols=91  Identities=20%  Similarity=0.207  Sum_probs=63.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||+|++++++++ |+.|+....     ............     ......            ...
T Consensus       176 PE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~------------~~~  233 (269)
T 4hcu_A          176 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGF-----RLYKPR------------LAS  233 (269)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTC-----CCCCCT------------TSC
T ss_pred             HHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC-----HHHHHHHHhcCc-----cCCCCC------------cCC
Confidence            566666778999999999999999999 898986321     111111111110     000000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.++++.|+.+.++
T Consensus       234 ~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~  267 (269)
T 4hcu_A          234 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  267 (269)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence            4678899999999999999999999999988764

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.49  E-value=9.2e-15  Score=99.02  Aligned_cols=96  Identities=19%  Similarity=0.259  Sum_probs=65.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..|+....  ...+...+.....        .....            .+.
T Consensus       228 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~~~~~--------~~~~~------------~~~  285 (334)
T 2pvf_A          228 PEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP--VEELFKLLKEGHR--------MDKPA------------NCT  285 (334)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHHTCC--------CCCCT------------TCC
T ss_pred             hHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC--HHHHHHHHhcCCC--------CCCCc------------cCC
Confidence            455556678899999999999999999 999985321  1111111111100        00111            334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE  118 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~~  118 (127)
                      ..+..++..||+.+|.+||++.+++..|+++........
T Consensus       286 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~~  324 (334)
T 2pvf_A          286 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEE  324 (334)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccCc
Confidence            567889999999999999999999999999988765443

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.49  E-value=1.4e-14  Score=94.91  Aligned_cols=91  Identities=20%  Similarity=0.207  Sum_probs=63.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||||++++++++ |+.|+....     ..........+.     ......            ...
T Consensus       174 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~i~~~~-----~~~~~~------------~~~  231 (267)
T 3t9t_A          174 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-----NSEVVEDISTGF-----RLYKPR------------LAS  231 (267)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTTC-----CCCCCT------------TSC
T ss_pred             hhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC-----HHHHHHHHhcCC-----cCCCCc------------cCc
Confidence            455566778899999999999999999 888876321     111111111110     000000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+..+
T Consensus       232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (267)
T 3t9t_A          232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES  265 (267)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence            4678899999999999999999999999988764

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.49  E-value=2e-14  Score=96.51  Aligned_cols=93  Identities=16%  Similarity=0.175  Sum_probs=63.2

Q ss_pred             CCcccCCC---CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSG---VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~---~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+....   ++.++||||||+++|++++|+.||.........+........            ....+        ..
T Consensus       212 PE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~------------~~~~~--------~~  271 (317)
T 2buj_A          212 PELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQL------------SIPQS--------PR  271 (317)
T ss_dssp             GGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--------------CCCC--------TT
T ss_pred             HhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccC------------CCCcc--------cc
Confidence            56665433   688999999999999999999998643222222222211100            00000        02


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ....+..++..||+.+|.+||++.+++..|+.+...
T Consensus       272 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~  307 (317)
T 2buj_A          272 HSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP  307 (317)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred             CCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence            345688999999999999999999999999887544

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.48  E-value=2.6e-15  Score=101.40  Aligned_cols=91  Identities=18%  Similarity=0.202  Sum_probs=63.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||+++|++++ |+.||....  ...+...+........     +   .            .+.
T Consensus       186 PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~-----~---~------------~~~  243 (325)
T 3kex_A          186 LESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--LAEVPDLLEKGERLAQ-----P---Q------------ICT  243 (325)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--TTHHHHHHHTTCBCCC-----C---T------------TBC
T ss_pred             hHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC--HHHHHHHHHcCCCCCC-----C---C------------cCc
Confidence            466666788999999999999999999 999986432  1122222221110000     0   0            122


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|..+...
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~  277 (325)
T 3kex_A          244 IDVYMVMVKCWMIDENIRPTFKELANEFTRMARD  277 (325)
T ss_dssp             TTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence            3457799999999999999999999999887544

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=99.48  E-value=4.6e-15  Score=98.55  Aligned_cols=82  Identities=17%  Similarity=0.137  Sum_probs=56.3

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..+ +.++||||+||+++||++|+.||....     ..........+.      ..+..            ..+
T Consensus       180 PE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~-----~~~~~~~i~~~~------~~~p~------------~~s  236 (275)
T 3hyh_A          180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES-----IPVLFKNISNGV------YTLPK------------FLS  236 (275)
T ss_dssp             HHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC------CCCCT------------TSC
T ss_pred             hhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCC------CCCCC------------CCC
Confidence            677777665 578999999999999999999986421     222221111110      00000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+|++.+|.+|||+.+++.
T Consensus       237 ~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          237 PGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHc
Confidence            46688999999999999999999874

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.48  E-value=1.2e-14  Score=104.30  Aligned_cols=90  Identities=21%  Similarity=0.278  Sum_probs=63.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++|||++ |+.||.....  ..+...+.   .+.       ++  ..+        ..+.
T Consensus       433 PE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i~---~~~-------~~--~~~--------~~~~  490 (535)
T 2h8h_A          433 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVE---RGY-------RM--PCP--------PECP  490 (535)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHHH---TTC-------CC--CCC--------TTCC
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHH---cCC-------CC--CCC--------CCCC
Confidence            566667789999999999999999999 8989863211  11111111   110       00  000        1344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++..||+.+|.+||++.+|+..|+.+..
T Consensus       491 ~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~  523 (535)
T 2h8h_A          491 ESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  523 (535)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence            577899999999999999999999999987653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.48  E-value=5.4e-15  Score=97.64  Aligned_cols=92  Identities=21%  Similarity=0.212  Sum_probs=63.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++|+++ |+.|+....     ............     ......            ...
T Consensus       179 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~------------~~~  236 (279)
T 1qpc_A          179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-----NPEVIQNLERGY-----RMVRPD------------NCP  236 (279)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-----HHHHHHHHHTTC-----CCCCCT------------TCC
T ss_pred             hhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-----HHHHHHHHhccc-----CCCCcc------------ccc
Confidence            455555678889999999999999999 888875321     111111111110     000000            234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+....
T Consensus       237 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  271 (279)
T 1qpc_A          237 EELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT  271 (279)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence            57789999999999999999999999999887653

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=99.48  E-value=3.5e-15  Score=100.39  Aligned_cols=77  Identities=18%  Similarity=0.139  Sum_probs=54.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||++|||++|+.||....     ..+.........      ...    +.        ..+.
T Consensus       195 PE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~-----~~~~~~~i~~~~------~~~----p~--------~~s~  251 (304)
T 3ubd_A          195 PEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD-----RKETMTMILKAK------LGM----PQ--------FLSP  251 (304)
T ss_dssp             HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC------CCC----CT--------TSCH
T ss_pred             HHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC-----HHHHHHHHHcCC------CCC----CC--------cCCH
Confidence            688888899999999999999999999999986421     111111111110      000    00        2345


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++.+||+.+|.+|||+
T Consensus       252 ~~~~li~~~L~~dP~~R~ta  271 (304)
T 3ubd_A          252 EAQSLLRMLFKRNPANRLGA  271 (304)
T ss_dssp             HHHHHHHHHTCSSGGGSTTC
T ss_pred             HHHHHHHHHcccCHHHCCCC
Confidence            67889999999999999985

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.48  E-value=1.9e-15  Score=102.07  Aligned_cols=101  Identities=18%  Similarity=0.224  Sum_probs=64.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc--------cccccccccccCCCCcchh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH--------VVYIVDPILLNDGKGETRI   72 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~   72 (127)
                      ||.+.+..++.++||||||++++++++|..|+....      ..+........        ....+........      
T Consensus       217 PE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  284 (326)
T 2w1i_A          217 PESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP------AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPR------  284 (326)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHH------HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCC------
T ss_pred             chhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCH------HHHHHhhccccchhhhHHHHHHHhhcCCCCCC------
Confidence            455555667889999999999999999998864211      00110000000        0000000000000      


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                        +..++..+..++..||+.+|.+||++.+++..|+.+.....
T Consensus       285 --~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~  325 (326)
T 2w1i_A          285 --PDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA  325 (326)
T ss_dssp             --CTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred             --CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence              11344678899999999999999999999999999887653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.48  E-value=1.4e-14  Score=102.86  Aligned_cols=97  Identities=12%  Similarity=0.056  Sum_probs=66.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC-cHHH-HHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL-NLHR-FARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+..++.++|||||||++|||++|+.||........ .... ...........     .            .+..+
T Consensus       182 PE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-----~------------l~~~~  244 (483)
T 3sv0_A          182 VNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE-----A------------LCRGY  244 (483)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-----H------------HHTTS
T ss_pred             HHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-----H------------HhcCC
Confidence            4666777889999999999999999999999875322111 1111 11111100000     0            01123


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ...+..++..||+.+|.+||++.+|+..|+.+....
T Consensus       245 p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~  280 (483)
T 3sv0_A          245 PTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE  280 (483)
T ss_dssp             CHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence            457899999999999999999999999999887654

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.47  E-value=1.7e-14  Score=97.54  Aligned_cols=98  Identities=9%  Similarity=-0.032  Sum_probs=65.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++|+++|+.||.....  ............... ......+..            ..+ 
T Consensus       186 PE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~~-~~~~~~~~~------------~~p-  249 (330)
T 2izr_A          186 INTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKA--DTLKERYQKIGDTKR-ATPIEVLCE------------NFP-  249 (330)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC--SSHHHHHHHHHHHHH-HSCHHHHTT------------TCH-
T ss_pred             hHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccccc--ccHHHHHHHHHhhhc-cCCHHHHhc------------cCh-
Confidence            5666777889999999999999999999999875321  112111111100000 000000000            122 


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      .+..++..||+.+|.+||++.++...|+.+....
T Consensus       250 ~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~  283 (330)
T 2izr_A          250 EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK  283 (330)
T ss_dssp             HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence            7889999999999999999999999999877654

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.47  E-value=1.1e-14  Score=95.65  Aligned_cols=91  Identities=20%  Similarity=0.297  Sum_probs=61.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++++++ |+.||....     ............  ....+               ....
T Consensus       174 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~--~~~~~---------------~~~~  231 (268)
T 3sxs_A          174 PEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-----NSEVVLKVSQGH--RLYRP---------------HLAS  231 (268)
T ss_dssp             HHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTC--CCCCC---------------TTSC
T ss_pred             HHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC-----hHHHHHHHHcCC--CCCCC---------------CcCh
Confidence            455555678899999999999999999 999986322     111111111110  00000               0223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+|||+.+++..|+.+.++
T Consensus       232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~  265 (268)
T 3sxs_A          232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK  265 (268)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence            4678899999999999999999999999877543

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.47  E-value=4.9e-16  Score=104.94  Aligned_cols=103  Identities=20%  Similarity=0.171  Sum_probs=61.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-------ccccccccccccCCCCcchhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-------HVVYIVDPILLNDGKGETRIN   73 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~   73 (127)
                      ||.+.+..++.++||||||++++++++|+.|+.....      .........       .....+........       
T Consensus       199 PE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  265 (327)
T 3lxl_A          199 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSA------EFLRMMGCERDVPALSRLLELLEEGQRLPA-------  265 (327)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH------HHHHHCC----CCHHHHHHHHHHTTCCCCC-------
T ss_pred             HHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccc------hhhhhcccccccccHHHHHHHhhcccCCCC-------
Confidence            4555556678899999999999999999998753211      000000000       00000111111111       


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                       +......+.+++..||+.+|.+||++.+++..|+.+.......
T Consensus       266 -~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~  308 (327)
T 3lxl_A          266 -PPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGC  308 (327)
T ss_dssp             -CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-------
T ss_pred             -CCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCc
Confidence             1134567889999999999999999999999999987765543

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.46  E-value=3.2e-15  Score=99.16  Aligned_cols=93  Identities=17%  Similarity=0.122  Sum_probs=61.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||||++++++++ |+.||....     ..............    ....            ....
T Consensus       193 PE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~----~~~~------------~~~~  251 (291)
T 1u46_A          193 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQILHKIDKEGER----LPRP------------EDCP  251 (291)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTSCCC----CCCC------------TTCC
T ss_pred             chhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC-----HHHHHHHHHccCCC----CCCC------------cCcC
Confidence            455555667889999999999999999 999986422     11111111111000    0000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++..||+.+|.+||++.+++..|.++....
T Consensus       252 ~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~  286 (291)
T 1u46_A          252 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD  286 (291)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence            56789999999999999999999999998876543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.46  E-value=9.8e-15  Score=98.55  Aligned_cols=92  Identities=23%  Similarity=0.235  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....++.++||||||++++++++ |+.||....     ..........+.     .....            ....
T Consensus       210 PE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~-----~~~~~~~~~~~~-----~~~~~------------~~~~  267 (327)
T 1fvr_A          210 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT-----CAELYEKLPQGY-----RLEKP------------LNCD  267 (327)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHGGGTC-----CCCCC------------TTBC
T ss_pred             hhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc-----HHHHHHHhhcCC-----CCCCC------------CCCC
Confidence            455556667899999999999999998 999985321     111111111110     00000            0234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++.+||+.+|.+||++.+++..|..+....
T Consensus       268 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~  302 (327)
T 1fvr_A          268 DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEER  302 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhh
Confidence            56789999999999999999999999999887654

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.46  E-value=4.5e-14  Score=95.29  Aligned_cols=92  Identities=18%  Similarity=0.264  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||++++++++ |..|+....  ...+...+.   .....     ....            ...
T Consensus       214 PE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~~---~~~~~-----~~~~------------~~~  271 (327)
T 2yfx_A          214 PEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFVT---SGGRM-----DPPK------------NCP  271 (327)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH---TTCCC-----CCCT------------TCC
T ss_pred             HhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHHHHHHh---cCCCC-----CCCC------------CCC
Confidence            556666778999999999999999998 888875321  111111111   11000     0000            233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+..++..||+.+|.+||++.+++..|..+....
T Consensus       272 ~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~  306 (327)
T 2yfx_A          272 GPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDP  306 (327)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCH
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCH
Confidence            56788999999999999999999999999876654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.45  E-value=1.2e-14  Score=96.83  Aligned_cols=93  Identities=16%  Similarity=0.279  Sum_probs=62.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCC-CCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTK-KPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||+|++++++++|. .|+....  ..............        ...            ....
T Consensus       201 PE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~--------~~~------------~~~~  258 (298)
T 3f66_A          201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN--TFDITVYLLQGRRL--------LQP------------EYCP  258 (298)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC--TTTHHHHHHTTCCC--------CCC------------TTCC
T ss_pred             hHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC--HHHHHHHHhcCCCC--------CCC------------ccCC
Confidence            45555677899999999999999999954 4544321  11111111110000        000            0223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..+.+++..||+.+|.+||++.+++..|+.+.....
T Consensus       259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~  294 (298)
T 3f66_A          259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI  294 (298)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence            467889999999999999999999999999887543

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.44  E-value=7.3e-14  Score=93.74  Aligned_cols=88  Identities=13%  Similarity=0.110  Sum_probs=57.4

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++||||||++++|+++|+.||....     ...................                .....+..++
T Consensus       218 ~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~----------------~~~~~l~~li  276 (319)
T 2y4i_B          218 LPFSKHSDVFALGTIWYELHAREWPFKTQP-----AEAIIWQMGTGMKPNLSQI----------------GMGKEISDIL  276 (319)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHSSCSSSSCC-----HHHHHHHHHTTCCCCCCCS----------------SCCTTHHHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHhccCCCCCCCcC----------------CCCHHHHHHH
Confidence            457889999999999999999999986322     1111111111111111000                1223568899


Q ss_pred             hhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           87 VACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      ..||+.+|.+||++.+++..|+.+.....
T Consensus       277 ~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~  305 (319)
T 2y4i_B          277 LFCWAFEQEERPTFTKLMDMLEKLPKRNR  305 (319)
T ss_dssp             HHHHCSSTTTSCCHHHHHHHHTTC-----
T ss_pred             HHHhcCChhhCcCHHHHHHHHHHHHHhhc
Confidence            99999999999999999999998877653

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.44  E-value=4.5e-14  Score=94.94  Aligned_cols=90  Identities=17%  Similarity=0.277  Sum_probs=62.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||++++++++ |..|+....     ...............     ..            ....
T Consensus       209 PE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~~~~~~~~~~~~~~~-----~~------------~~~~  266 (322)
T 1p4o_A          209 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-----NEQVLRFVMEGGLLD-----KP------------DNCP  266 (322)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC-----HHHHHHHHHTTCCCC-----CC------------TTCC
T ss_pred             hhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC-----HHHHHHHHHcCCcCC-----CC------------CCCC
Confidence            566666778999999999999999999 888875321     111111111111100     00            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+..
T Consensus       267 ~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~  299 (322)
T 1p4o_A          267 DMLFELMRMCWQYNPKMRPSFLEIISSIKEEME  299 (322)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred             HHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence            567889999999999999999999999987644

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.43  E-value=5.1e-15  Score=98.68  Aligned_cols=97  Identities=19%  Similarity=0.247  Sum_probs=60.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--Cc-----cccccccccccCCCCcchhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--DH-----VVYIVDPILLNDGKGETRIN   73 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~   73 (127)
                      ||.+.+..++.++||||+|++++++++|+.|+....      ........+  ..     ....+........       
T Consensus       198 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  264 (302)
T 4e5w_A          198 PECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPM------ALFLKMIGPTHGQMTVTRLVNTLKEGKRLPC-------  264 (302)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH------HHHHHHHCSCCGGGHHHHHHHHHHTTCCCCC-------
T ss_pred             CeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchh------hHHhhccCCcccccCHHHHHHHHhccCCCCC-------
Confidence            455556677889999999999999999998753211      000000000  00     0000000000000       


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                       +......+.+++..||+.+|.+|||+.++++.|+.++
T Consensus       265 -~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll  301 (302)
T 4e5w_A          265 -PPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL  301 (302)
T ss_dssp             -CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             -CCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence             1133467889999999999999999999999999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.43  E-value=4.6e-14  Score=94.79  Aligned_cols=81  Identities=17%  Similarity=0.112  Sum_probs=53.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++|||++   ||....    ...............                 ........
T Consensus       199 PE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~----~~~~~~~~~~~~~~p-----------------~~~~~~~~  254 (299)
T 4g31_A          199 PEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM----ERVRTLTDVRNLKFP-----------------PLFTQKYP  254 (299)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHHHHHHHHHTTCCC-----------------HHHHHHCH
T ss_pred             HHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc----HHHHHHHHHhcCCCC-----------------CCCcccCH
Confidence            678888899999999999999999996   654211    011111111111100                 01123344


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....++.+||+.+|.+|||+.++++
T Consensus       255 ~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          255 CEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhc
Confidence            5677999999999999999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.43  E-value=7.6e-14  Score=94.13  Aligned_cols=88  Identities=19%  Similarity=0.174  Sum_probs=51.1

Q ss_pred             CCcc----cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            1 VEYG----LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~----~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||.+    ....++.++||||||++++++++|+.||.......    ........+     ..+.+.....        .
T Consensus       194 PE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~-----~~~~~~~~~~--------~  256 (327)
T 3aln_A          194 PERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF----DQLTQVVKG-----DPPQLSNSEE--------R  256 (327)
T ss_dssp             ------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-----------CCCCCS-----CCCCCCCCSS--------C
T ss_pred             ceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH----HHHHHHhcC-----CCCCCCCccc--------c
Confidence            6666    45668999999999999999999999986422110    000000000     0111111000        0


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....+..++..||+.+|.+||++.+++.
T Consensus       257 ~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          257 EFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             CCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             cCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            23457889999999999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.43  E-value=2.9e-13  Score=94.05  Aligned_cols=88  Identities=15%  Similarity=0.110  Sum_probs=59.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC--cHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL--NLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++..+.++.++|||||||++|||++|+.||........  .....+......         .....        ....
T Consensus       232 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~---------~~~~~--------~~~~  294 (400)
T 1nxk_A          232 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE---------FPNPE--------WSEV  294 (400)
T ss_dssp             GGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC---------CCTTT--------TTTS
T ss_pred             HhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc---------CCCcc--------cccC
Confidence            7888888999999999999999999999999864322111  111111110000         00000        0023


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+.+++..||..+|.+|||+.+++.
T Consensus       295 s~~~~~li~~~L~~dP~~Rpt~~eil~  321 (400)
T 1nxk_A          295 SEEVKMLIRNLLKTEPTQRMTITEFMN  321 (400)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            456789999999999999999999885

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.43  E-value=8e-14  Score=102.24  Aligned_cols=91  Identities=14%  Similarity=0.151  Sum_probs=64.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++||||||+++|||++ |..||.....  ......+..   +..     ..+.            ..++
T Consensus       561 PE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i~~---~~~-----~~~~------------~~~~  618 (656)
T 2j0j_A          561 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIEN---GER-----LPMP------------PNCP  618 (656)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHH---TCC-----CCCC------------TTCC
T ss_pred             HHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHc---CCC-----CCCC------------cccc
Confidence            566667788999999999999999997 8889864221  111111111   100     0011            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+..++..||+.+|.+||++.+++..|+.+...
T Consensus       619 ~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~  652 (656)
T 2j0j_A          619 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  652 (656)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHH
Confidence            5778999999999999999999999999998765

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.42  E-value=9.4e-14  Score=91.63  Aligned_cols=82  Identities=16%  Similarity=0.124  Sum_probs=47.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.|+.......             ...........  .+        .....
T Consensus       181 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-------------~~~~~~~~~~~--~~--------~~~~~  237 (278)
T 3cok_A          181 PEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-------------TLNKVVLADYE--MP--------SFLSI  237 (278)
T ss_dssp             -----------CTHHHHHHHHHHHHHHSSCSSCCCSCC------------------CCSSCCC--CC--------TTSCH
T ss_pred             cchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-------------HHHHHhhcccC--Cc--------cccCH
Confidence            677777888999999999999999999999986422110             00011100000  00        12345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       238 ~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          238 EAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHcccCHhhCCCHHHHhc
Confidence            6789999999999999999999875

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.42  E-value=4.7e-14  Score=94.27  Aligned_cols=85  Identities=14%  Similarity=0.065  Sum_probs=57.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++|+++|+.||.....     .............     ...          .+.....
T Consensus       185 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~-----~~~~~~~~~~~~~-----~~~----------~~~~~~~  244 (297)
T 3fxz_A          185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP-----LRALYLIATNGTP-----ELQ----------NPEKLSA  244 (297)
T ss_dssp             HHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHHCSC-----CCS----------CGGGSCH
T ss_pred             hhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCC-----CCC----------CccccCH
Confidence            5667777899999999999999999999999863211     1111100000000     000          0113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       245 ~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          245 IFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhh
Confidence            6788999999999999999999874

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.42  E-value=4e-14  Score=97.20  Aligned_cols=90  Identities=7%  Similarity=-0.072  Sum_probs=58.0

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-ccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+.+  ..++.++|||||||+++||++|+.||..........       +.. ..............        ...
T Consensus       260 PE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~--------~~~  324 (371)
T 3q60_A          260 REFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGS-------WKRPSLRVPGTDSLAFGS--------CTP  324 (371)
T ss_dssp             HHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTC-------CCBCCTTSCCCCSCCCTT--------SSC
T ss_pred             hhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccc-------hhhhhhhhccccccchhh--------ccC
Confidence            566666  678999999999999999999999987542211100       000 00000000111000        013


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++.+||+.+|.+||++.+++.
T Consensus       325 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          325 LPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             CCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            3467889999999999999999999874

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.42  E-value=4.4e-14  Score=97.24  Aligned_cols=78  Identities=9%  Similarity=0.054  Sum_probs=52.7

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.++|||||||++|||++|+.||.......             ....+.. .. .            .....+.+++.
T Consensus       289 ~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~-------------~~~~~~~-~~-~------------~~~~~~~~li~  341 (377)
T 3byv_A          289 LMTFSFDAWALGLVIYWIWCADLPITKDAALG-------------GSEWIFR-SC-K------------NIPQPVRALLE  341 (377)
T ss_dssp             ECCHHHHHHHHHHHHHHHHHSSCCC------C-------------CSGGGGS-SC-C------------CCCHHHHHHHH
T ss_pred             cCChhhhHHHHHHHHHHHHHCCCCCccccccc-------------chhhhhh-hc-c------------CCCHHHHHHHH
Confidence            78999999999999999999999985322110             0011111 00 0            22356788999


Q ss_pred             hccCCCccCCCCHHHHHH--HHHHhHH
Q 042057           88 ACSMESPQDRMNITNVVH--ELQSVKN  112 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~--~L~~~~~  112 (127)
                      .||+.+|.+||++.+++.  .+..+..
T Consensus       342 ~~L~~dp~~Rpt~~e~l~hp~f~~~~~  368 (377)
T 3byv_A          342 GFLRYPKEDRLLPLQAMETPEYEQLRT  368 (377)
T ss_dssp             HHTCSSGGGCCCHHHHHTSHHHHHHHH
T ss_pred             HHcCCCchhCCCHHHHhhChHHHHHHH
Confidence            999999999999999985  3444433

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.41  E-value=1.3e-13  Score=93.13  Aligned_cols=85  Identities=20%  Similarity=0.167  Sum_probs=57.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++||||||++++|+++|+.||.....  ......+....        .+.+..          ......
T Consensus       210 PE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~--------~~~~~~----------~~~~~~  269 (321)
T 2c30_A          210 PEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSP--------PPKLKN----------SHKVSP  269 (321)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSS--------CCCCTT----------GGGSCH
T ss_pred             HhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCC--------CCCcCc----------cccCCH
Confidence            5677778899999999999999999999999863211  11111111111        011100          012334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       270 ~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          270 VLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            6788999999999999999999875

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.41  E-value=8.1e-14  Score=93.50  Aligned_cols=95  Identities=12%  Similarity=0.025  Sum_probs=60.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||||++++++++|+.||.....      .............  .....            ...+.
T Consensus       204 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~~~~~--~~~~~------------~~~~~  263 (309)
T 2h34_A          204 PERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL------SVMGAHINQAIPR--PSTVR------------PGIPV  263 (309)
T ss_dssp             GGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH------HHHHHHHHSCCCC--GGGTS------------TTCCT
T ss_pred             HHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH------HHHHHHhccCCCC--ccccC------------CCCCH
Confidence            6778888899999999999999999999999863211      1111111110000  00000            12334


Q ss_pred             HHHHHhhhccCCCccCCC-CHHHHHHHHHHhHHHHh
Q 042057           81 SMVRIGVACSMESPQDRM-NITNVVHELQSVKNILL  115 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~~~  115 (127)
                      .+..++..||+.+|.+|| ++.+++..|+.......
T Consensus       264 ~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          264 AFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             HHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            678899999999999999 89999999998765543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=99.41  E-value=6.3e-15  Score=99.37  Aligned_cols=81  Identities=6%  Similarity=-0.013  Sum_probs=56.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||+++||++|+.||....     ............      .....            ....
T Consensus       203 PEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~------~~~p~------------~~s~  259 (311)
T 4aw0_A          203 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EGLIFAKIIKLE------YDFPE------------KFFP  259 (311)
T ss_dssp             HHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTC------CCCCT------------TCCH
T ss_pred             HHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCC------CCCCc------------ccCH
Confidence            677777889999999999999999999999986321     111111111110      00111            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .+.+++.+|+..+|.+|||+.++.
T Consensus       260 ~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          260 KARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHHccCCHhHCcChHHHc
Confidence            568899999999999999998753

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.40  E-value=1.5e-14  Score=95.55  Aligned_cols=88  Identities=16%  Similarity=0.128  Sum_probs=60.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|..|+...       ..........        .+..            ....
T Consensus       190 PE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~-------~~~~~~~~~~--------~~~~------------~~~~  242 (284)
T 2a19_B          190 PEQISSQDYGKEVDLYALGLILAELLHVCDTAFET-------SKFFTDLRDG--------IISD------------IFDK  242 (284)
T ss_dssp             HHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH-------HHHHHHHHTT--------CCCT------------TSCH
T ss_pred             hhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH-------HHHHHHhhcc--------cccc------------cCCH
Confidence            56666777899999999999999999999885321       0111111111        1111            1223


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILL  115 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~  115 (127)
                      .+..++..||+.+|.+||++.+++..|..+..+..
T Consensus       243 ~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~  277 (284)
T 2a19_B          243 KEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE  277 (284)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence            56789999999999999999999999988766544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.40  E-value=8.5e-14  Score=91.83  Aligned_cols=85  Identities=14%  Similarity=0.096  Sum_probs=57.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.|+....  ...+...+.   .+...     .+..            ....
T Consensus       185 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~i~---~~~~~-----~~~~------------~~~~  242 (279)
T 2w5a_A          185 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIR---EGKFR-----RIPY------------RYSD  242 (279)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HTCCC-----CCCT------------TSCH
T ss_pred             hHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC--HHHHHHHHh---hcccc-----cCCc------------ccCH
Confidence            566667778999999999999999999999986432  111111111   11110     1111            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHEL  107 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L  107 (127)
                      .+..++..||+.+|.+||++.+++..+
T Consensus       243 ~l~~li~~~l~~~p~~Rps~~~ll~~~  269 (279)
T 2w5a_A          243 ELNEIITRMLNLKDYHRPSVEEILENP  269 (279)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence            678999999999999999999988643

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.40  E-value=2.1e-13  Score=90.39  Aligned_cols=90  Identities=14%  Similarity=0.130  Sum_probs=57.7

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCC-CCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKP-TDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+ ..++.++||||||++++|+++|..+ +....     ...........       ..+..            ..
T Consensus       186 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~-----~~~~~~~~~~~-------~~~~~------------~~  241 (289)
T 4fvq_A          186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALD-----SQRKLQFYEDR-------HQLPA------------PK  241 (289)
T ss_dssp             HHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTT-------CCCCC------------CS
T ss_pred             HHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccc-----hHHHHHHhhcc-------CCCCC------------CC
Confidence            555555 6689999999999999999996554 33211     11111100000       00000            11


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ...+.+++..||+.+|.+|||+.+++..|+.+....
T Consensus       242 ~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~  277 (289)
T 4fvq_A          242 AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPD  277 (289)
T ss_dssp             SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC---
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCC
Confidence            234678999999999999999999999999887654

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.40  E-value=1.3e-13  Score=94.91  Aligned_cols=105  Identities=11%  Similarity=0.046  Sum_probs=61.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCc----HHHHHHhhcCCcc----------cccccc-----c
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLN----LHRFARMALPDHV----------VYIVDP-----I   61 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~----------~~~~~~-----~   61 (127)
                      ||.+.+..++.++|||||||+++||++|+.||.........    ....+........          ......     .
T Consensus       262 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  341 (397)
T 1wak_A          262 LEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKH  341 (397)
T ss_dssp             HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSS
T ss_pred             ChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCcccccc
Confidence            57777778999999999999999999999998754322211    0111111000000          000000     0


Q ss_pred             cccCCCCc------chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           62 LLNDGKGE------TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        62 ~~~~~~~~------~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +....+.+      .....+......+.+++.+||+.+|.+|||+.+++.
T Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          342 ITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             CCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             ccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            00000000      001123456778899999999999999999999874

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.39  E-value=7e-14  Score=92.61  Aligned_cols=81  Identities=20%  Similarity=0.317  Sum_probs=52.8

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      ....++.++||||||++++++++|+.|+.........+.....    ...     +.....           .....+.+
T Consensus       186 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~----~~~-----~~~~~~-----------~~~~~~~~  245 (290)
T 3fme_A          186 NQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE----EPS-----PQLPAD-----------KFSAEFVD  245 (290)
T ss_dssp             TC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHH----SCC-----CCCCTT-----------TSCHHHHH
T ss_pred             cCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhc----cCC-----CCcccc-----------cCCHHHHH
Confidence            4567889999999999999999999998632211111111111    100     000000           23356789


Q ss_pred             HhhhccCCCccCCCCHHHHHH
Q 042057           85 IGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ++..||+.+|.+|||+.+++.
T Consensus       246 li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          246 FTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHhhcChhhCcCHHHHHh
Confidence            999999999999999999886

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.39  E-value=3.3e-14  Score=98.42  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=51.5

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      +.++.++|||||||++|||++|+.||.....    ..........        +......+.        .....+.+++
T Consensus       242 ~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~----~~~~~~~~~~--------~~~~~~~~~--------~~~~~~~~li  301 (390)
T 2zmd_A          242 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIID--------PNHEIEFPD--------IPEKDLQDVL  301 (390)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCC----HHHHHHHHHC--------TTSCCCCCC--------CSCHHHHHHH
T ss_pred             cCCCChhhHHHHHHHHHHHHHCCCcchhhhH----HHHHHHHHhC--------ccccCCCCc--------cchHHHHHHH
Confidence            4688999999999999999999999863211    1111111111        111111111        1134678899


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..||..+|.+||++.+++.
T Consensus       302 ~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          302 KCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHcccChhhCCCHHHHhh
Confidence            9999999999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.39  E-value=4.2e-14  Score=96.20  Aligned_cols=79  Identities=20%  Similarity=0.283  Sum_probs=51.3

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      +.++.++|||||||+++||++|+.||.....    .........        ++......+.        .....+.+++
T Consensus       195 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~~~~--------~~~~~~~~~~--------~~~~~l~~li  254 (343)
T 3dbq_A          195 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAII--------DPNHEIEFPD--------IPEKDLQDVL  254 (343)
T ss_dssp             --CCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHH--------CTTSCCCCCC--------CSCHHHHHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCcchhhhh----HHHHHHHHh--------cCCcccCCcc--------cCCHHHHHHH
Confidence            6788999999999999999999999864211    111111111        1111111111        1234678899


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..||+.+|.+|||+.+++.
T Consensus       255 ~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          255 KCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHcCCChhHCCCHHHHHh
Confidence            9999999999999999874

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.39  E-value=4.3e-13  Score=91.60  Aligned_cols=84  Identities=20%  Similarity=0.163  Sum_probs=55.4

Q ss_pred             CCcc---cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYG---LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~---~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+   ..+.++.++||||||++++||++|+.|+....     ............     .+.....           .
T Consensus       219 PE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~-----~~~~~~~~~~~~-----~~~~~~~-----------~  277 (348)
T 1u5q_A          219 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNE-----SPALQSG-----------H  277 (348)
T ss_dssp             HHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSC-----CCCCCCT-----------T
T ss_pred             HhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHHhcC-----CCCCCCC-----------C
Confidence            4554   35678999999999999999999999985321     111111111110     0111100           2


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++..||+.+|.+|||+.+++.
T Consensus       278 ~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          278 WSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            2346788999999999999999999874

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.39  E-value=2.1e-13  Score=92.89  Aligned_cols=82  Identities=20%  Similarity=0.136  Sum_probs=55.9

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..+ +.++||||||++++++++|+.||.......              ....+.... ...        +....
T Consensus       176 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~--------------~~~~i~~~~-~~~--------p~~~s  232 (336)
T 3h4j_B          176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN--------------LFKKVNSCV-YVM--------PDFLS  232 (336)
T ss_dssp             GGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT--------------CBCCCCSSC-CCC--------CTTSC
T ss_pred             HHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH--------------HHHHHHcCC-CCC--------cccCC
Confidence            677766665 688999999999999999999986432111              011111000 000        11234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||..+|.+|||+.+++.
T Consensus       233 ~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          233 PGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            56788999999999999999999874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.38  E-value=1.9e-13  Score=89.96  Aligned_cols=85  Identities=18%  Similarity=0.191  Sum_probs=56.3

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....+ +.++||||||++++++++|+.||............+...   ...   ..+              .....
T Consensus       176 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~---~~~--------------~~~~~  235 (276)
T 2yex_A          176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK---KTY---LNP--------------WKKID  235 (276)
T ss_dssp             GGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT---CTT---STT--------------GGGSC
T ss_pred             hHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc---ccc---cCc--------------hhhcC
Confidence            666666554 778999999999999999999987533222212121110   000   000              00223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+..++..||+.+|.+|||+.+++.
T Consensus       236 ~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          236 SAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            46678999999999999999998864

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.38  E-value=2.5e-13  Score=90.56  Aligned_cols=96  Identities=21%  Similarity=0.217  Sum_probs=64.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+|+++|++++|+.||....     ................ .....            ...+.
T Consensus       181 PE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~-~~~~~------------~~~~~  242 (294)
T 4eqm_A          181 PEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGET-----AVSIAIKHIQDSVPNV-TTDVR------------KDIPQ  242 (294)
T ss_dssp             HHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC-----HHHHHHHHHSSCCCCH-HHHSC------------TTSCH
T ss_pred             HhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhhccCCCc-chhcc------------cCCCH
Confidence            566677788999999999999999999999986321     1111111111111100 00011            12345


Q ss_pred             HHHHHhhhccCCCccCCC-CHHHHHHHHHHhHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-NITNVVHELQSVKNIL  114 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~~~~  114 (127)
                      .+..++.+||+.+|.+|| ++.++...|..+....
T Consensus       243 ~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          243 SLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             HHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             HHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence            678999999999999998 7899999888775543

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.37  E-value=1.3e-13  Score=96.14  Aligned_cols=74  Identities=8%  Similarity=-0.055  Sum_probs=52.0

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      ....++.++|||||||++|||++|+.||.......                 ..........          ..+..+..
T Consensus       290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~-----------------~~~~~~~~~~----------~~~~~~~~  342 (413)
T 3dzo_A          290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALG-----------------GSEWIFRSCK----------NIPQPVRA  342 (413)
T ss_dssp             CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGS-----------------CSGGGGSSCC----------CCCHHHHH
T ss_pred             cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhh-----------------hHHHHHhhcc----------cCCHHHHH
Confidence            44557889999999999999999999986432111                 1111111100          12356789


Q ss_pred             HhhhccCCCccCCCCHHHHHH
Q 042057           85 IGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ++..||+.+|.+||++.+++.
T Consensus       343 li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          343 LLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHccCChhhCcCHHHHHh
Confidence            999999999999999888764

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.37  E-value=6.4e-13  Score=88.17  Aligned_cols=84  Identities=20%  Similarity=0.272  Sum_probs=56.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||+|++++++++|+.||....    ...................                .....
T Consensus       199 PE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~----~~~~~~~~~~~~~~~~~~~----------------~~~~~  257 (290)
T 1t4h_A          199 PEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPASFD----------------KVAIP  257 (290)
T ss_dssp             GGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCGGGG----------------GCCCH
T ss_pred             HHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcC----cHHHHHHHHhccCCccccC----------------CCCCH
Confidence            56554 568999999999999999999999986321    1222222111111110000                02234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhh
Confidence            6789999999999999999999874

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.37  E-value=2.1e-13  Score=98.69  Aligned_cols=86  Identities=16%  Similarity=0.065  Sum_probs=58.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..|+.++||||+||++|||++|..||....     ............. . .....            ......
T Consensus       325 PEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-----~~~~~~~i~~~~~-~-~~~~~------------~~~~s~  385 (573)
T 3uto_A          325 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-----DDETLRNVKSCDW-N-MDDSA------------FSGISE  385 (573)
T ss_dssp             HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTCC-C-CCSGG------------GTTSCH
T ss_pred             HHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC-----HHHHHHHHHhCCC-C-CCccc------------ccCCCH
Confidence            677888889999999999999999999999986422     1111111111100 0 00000            012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       386 ~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          386 DGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6788999999999999999999875

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.37  E-value=1.9e-13  Score=92.82  Aligned_cols=77  Identities=14%  Similarity=0.210  Sum_probs=54.9

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..+ +.++||||||++++++++|+.||.....                   ..........          ...
T Consensus       198 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-------------------~~~~~~~~~~----------~~~  248 (335)
T 3dls_A          198 PEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE-------------------TVEAAIHPPY----------LVS  248 (335)
T ss_dssp             HHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG-------------------GTTTCCCCSS----------CCC
T ss_pred             hhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH-------------------HHhhccCCCc----------ccC
Confidence            566666665 7889999999999999999999853210                   0111111100          223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      ..+..++..||+.+|.+||++.+++..
T Consensus       249 ~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          249 KELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            567899999999999999999998853

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.37  E-value=3.1e-13  Score=92.27  Aligned_cols=87  Identities=15%  Similarity=0.129  Sum_probs=58.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||++||+++|..||........ .   ......... ....+.             ......
T Consensus       219 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~-~---~~~i~~~~~-~~~~~~-------------~~~~~~  280 (349)
T 2w4o_A          219 PEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQF-M---FRRILNCEY-YFISPW-------------WDEVSL  280 (349)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHH-H---HHHHHTTCC-CCCTTT-------------TTTSCH
T ss_pred             HHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHH-H---HHHHHhCCC-ccCCch-------------hhhCCH
Confidence            6777778899999999999999999999999864321110 1   111111100 000000             012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       281 ~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          281 NAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            6789999999999999999999874

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.36  E-value=1e-12  Score=88.37  Aligned_cols=101  Identities=8%  Similarity=-0.013  Sum_probs=61.2

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCC--CcHHHHHHhhcCC-cccccc---ccccc--cCCCCcchhhhHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD--LNLHRFARMALPD-HVVYIV---DPILL--NDGKGETRINSRLA   77 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~---~~~~~--~~~~~~~~~~~~~~   77 (127)
                      ...++.++|||||||++||+++|+.||.......  ......+....+. ......   .....  ...+  ........
T Consensus       197 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~  274 (319)
T 4euu_A          197 QKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP--VSCSLSRG  274 (319)
T ss_dssp             CCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCC--TTCSSCHH
T ss_pred             cCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCC--cccccchh
Confidence            4678999999999999999999999986432211  1122222211111 111000   00000  0000  00112346


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ....+..++..||+.+|.+||++.+++....
T Consensus       275 ~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          275 LQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             HHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             HHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            6778899999999999999999999987665

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.36  E-value=2.2e-13  Score=92.11  Aligned_cols=86  Identities=10%  Similarity=-0.003  Sum_probs=57.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||+++++|++|..||.....  ......+..... ..    ...            .......
T Consensus       186 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~~~~~~~-~~----~~~------------~~~~~~~  246 (326)
T 2y0a_A          186 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK--QETLANVSAVNY-EF----EDE------------YFSNTSA  246 (326)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH--HHHHHHHHHTCC-CC----CHH------------HHTTSCH
T ss_pred             ceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH--HHHHHHHHhcCC-Cc----Ccc------------ccccCCH
Confidence            5677778899999999999999999999999853211  111111110000 00    000            0112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       247 ~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          247 LAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhc
Confidence            6788999999999999999999885

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.36  E-value=1.3e-13  Score=92.50  Aligned_cols=79  Identities=19%  Similarity=0.260  Sum_probs=51.9

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++||||||++++++++|+.||.....    -.........        +......+.        .....+..++
T Consensus       214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~----~~~~~~~~~~--------~~~~~~~~~--------~~~~~l~~li  273 (313)
T 3cek_A          214 SKISPKSDVWSLGCILYYMTYGKTPFQQIIN----QISKLHAIID--------PNHEIEFPD--------IPEKDLQDVL  273 (313)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHC--------TTSCCCCCC--------CSCHHHHHHH
T ss_pred             ccCCchHHHHHHHHHHHHHHhCCCchhhHHH----HHHHHHHHHh--------cccccCCcc--------cchHHHHHHH
Confidence            4688899999999999999999999864221    1111111111        111111110        1234678899


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..||+.+|.+||++.+++.
T Consensus       274 ~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          274 KCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             HHHTCSSTTTSCCHHHHHT
T ss_pred             HHHccCCcccCcCHHHHhc
Confidence            9999999999999999875

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.36  E-value=8.1e-14  Score=93.62  Aligned_cols=80  Identities=15%  Similarity=0.111  Sum_probs=53.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++. +.++.++||||||+++||+++|..++....       .+. ......    ..+.            .+.....
T Consensus       225 PE~~~-~~~~~~~DiwslG~il~el~~g~~~~~~~~-------~~~-~~~~~~----~~~~------------~~~~~~~  279 (311)
T 3p1a_A          225 PELLQ-GSYGTAADVFSLGLTILEVACNMELPHGGE-------GWQ-QLRQGY----LPPE------------FTAGLSS  279 (311)
T ss_dssp             GGGGG-TCCSTHHHHHHHHHHHHHHHHTCCCCSSHH-------HHH-HHTTTC----CCHH------------HHTTSCH
T ss_pred             HhHhc-CCCCchhhHHHHHHHHHHHHhCCCCCCCcc-------HHH-HHhccC----CCcc------------cccCCCH
Confidence            67665 478999999999999999999976643210       000 001110    0011            1113346


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+|||+.+++.
T Consensus       280 ~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          280 ELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHh
Confidence            7889999999999999999999874

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.36  E-value=5.3e-13  Score=89.19  Aligned_cols=86  Identities=12%  Similarity=0.015  Sum_probs=58.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||+|++++++++|..||....  ...+...+.....    .. ....            ......
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~----~~-~~~~------------~~~~~~  236 (304)
T 2jam_A          176 PEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEET--ESKLFEKIKEGYY----EF-ESPF------------WDDISE  236 (304)
T ss_dssp             TTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHCCC----CC-CTTT------------TTTSCH
T ss_pred             hHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHcCCC----CC-Cccc------------cccCCH
Confidence            788888889999999999999999999999986321  1111111111100    00 0000            012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          237 SAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhc
Confidence            6789999999999999999999874

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.36  E-value=2.3e-13  Score=89.94  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=57.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+|++++++++|+.||....  .......+......    ...+.             ......
T Consensus       176 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~--~~~~~~~~~~~~~~----~~~~~-------------~~~~~~  236 (284)
T 3kk8_A          176 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAGAYD----YPSPE-------------WDTVTP  236 (284)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCC----CCTTT-------------TTTSCH
T ss_pred             chhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCc--hhHHHHHHHhcccc----CCchh-------------hcccCH
Confidence            566777788999999999999999999999985321  11111111110000    00000             002335


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          237 EAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhc
Confidence            6789999999999999999999875

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.36  E-value=1.4e-13  Score=93.01  Aligned_cols=85  Identities=18%  Similarity=0.179  Sum_probs=55.5

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....+ +.++||||||+++++|++|+.||............+.....  .    ..+              .....
T Consensus       176 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~--~----~~~--------------~~~~~  235 (323)
T 3tki_A          176 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT--Y----LNP--------------WKKID  235 (323)
T ss_dssp             HHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT--T----STT--------------GGGSC
T ss_pred             cHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc--c----CCc--------------cccCC
Confidence            455555554 77899999999999999999998743322222222111000  0    000              00233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||..+|.+|||+.+++.
T Consensus       236 ~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          236 SAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhh
Confidence            45678999999999999999999864

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.35  E-value=3.6e-13  Score=91.89  Aligned_cols=34  Identities=26%  Similarity=0.300  Sum_probs=30.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++|||||||++++|++|+.||..
T Consensus       228 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  261 (360)
T 3llt_A          228 PEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT  261 (360)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             cHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence            6777888899999999999999999999999864

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.35  E-value=1e-13  Score=93.68  Aligned_cols=86  Identities=14%  Similarity=0.092  Sum_probs=57.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|..||....     ..............  ...            ......+.
T Consensus       172 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~--~~~------------~~~~~~s~  232 (321)
T 1tki_A          172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEYT--FDE------------EAFKEISI  232 (321)
T ss_dssp             HHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCCC--CCH------------HHHTTSCH
T ss_pred             cHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-----HHHHHHHHHcCCCC--CCh------------hhhccCCH
Confidence            566667778999999999999999999999986321     11111111111000  000            00112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       233 ~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          233 EAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhc
Confidence            6789999999999999999999875

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.35  E-value=4.3e-13  Score=94.41  Aligned_cols=86  Identities=10%  Similarity=0.000  Sum_probs=57.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||+++++++|..||....  ...+...+.....    ....+.             ......
T Consensus       182 PE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~--~~~~~~~i~~~~~----~~~~~~-------------~~~~s~  242 (444)
T 3soa_A          182 PEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED--QHRLYQQIKAGAY----DFPSPE-------------WDTVTP  242 (444)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHTCC----CCCTTT-------------TTTSCH
T ss_pred             HHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc--HHHHHHHHHhCCC----CCCccc-------------cccCCH
Confidence            677777789999999999999999999999985321  1111111111100    000000             002345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+|||+.+++.
T Consensus       243 ~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          243 EAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhc
Confidence            6788999999999999999999885

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.35  E-value=9.2e-14  Score=92.77  Aligned_cols=84  Identities=17%  Similarity=0.263  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++||||||++++++++|+.|+.....  ......+..   ..     .+.+..            ....
T Consensus       188 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~---~~-----~~~~~~------------~~~~  245 (303)
T 3a7i_A          188 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVLFLIPK---NN-----PPTLEG------------NYSK  245 (303)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHH---SC-----CCCCCS------------SCCH
T ss_pred             HHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHHHHhhc---CC-----CCCCcc------------ccCH
Confidence            5666777889999999999999999999999863211  111111110   00     011111            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+..++..||+.+|.+||++.+++..
T Consensus       246 ~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          246 PLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            67899999999999999999998853

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.35  E-value=1.4e-12  Score=91.42  Aligned_cols=81  Identities=12%  Similarity=0.127  Sum_probs=54.5

Q ss_pred             CCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            7 SGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      +.++.++|||||||+++||++ |+.|+......   ...........  ...  +.+           ........+.++
T Consensus       214 ~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~---~~~i~~~~~~~--~~~--~~~-----------~~~~~~~~~~~l  275 (434)
T 2rio_A          214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR---ESNIIRGIFSL--DEM--KCL-----------HDRSLIAEATDL  275 (434)
T ss_dssp             CCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH---HHHHHHTCCCC--CCC--TTC-----------CCHHHHHHHHHH
T ss_pred             cCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh---HHHHhcCCCCc--ccc--ccc-----------ccccchHHHHHH
Confidence            678999999999999999999 89998642211   11111111110  000  000           112556788999


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||+.+|.+||++.+++.
T Consensus       276 i~~~L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          276 ISQMIDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             HHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHhhCChhhCCCHHHHHh
Confidence            99999999999999999874

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.35  E-value=1.4e-13  Score=90.86  Aligned_cols=83  Identities=14%  Similarity=0.102  Sum_probs=56.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.||....     ...........      ......            ....
T Consensus       176 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~------~~~~~~------------~~~~  232 (279)
T 3fdn_A          176 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETYKRISRV------EFTFPD------------FVTE  232 (279)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHT------CCCCCT------------TSCH
T ss_pred             HhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc-----HHHHHHHHHhC------CCCCCC------------cCCH
Confidence            566677788999999999999999999999986321     11111100000      000000            2334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHE  106 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~  106 (127)
                      .+..++..||+.+|.+||++.++++.
T Consensus       233 ~~~~li~~~l~~~p~~Rps~~e~l~h  258 (279)
T 3fdn_A          233 GARDLISRLLKHNPSQRPMLREVLEH  258 (279)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhhC
Confidence            67889999999999999999998853

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.35  E-value=3.7e-13  Score=92.36  Aligned_cols=86  Identities=13%  Similarity=0.035  Sum_probs=57.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++|+|++|..||....  ...+...+......    ...+.             ......
T Consensus       199 PE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~--~~~~~~~i~~~~~~----~~~~~-------------~~~~~~  259 (362)
T 2bdw_A          199 PEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED--QHRLYAQIKAGAYD----YPSPE-------------WDTVTP  259 (362)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHTCCC----CCTTG-------------GGGSCH
T ss_pred             HHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC--HHHHHHHHHhCCCC----CCccc-------------ccCCCH
Confidence            577777789999999999999999999999985321  11111111111000    00000             012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       260 ~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          260 EAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhc
Confidence            6788999999999999999998874

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.35  E-value=3e-13  Score=91.43  Aligned_cols=86  Identities=12%  Similarity=-0.005  Sum_probs=57.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++||||||++++++++|+.||.....  ......+...... .        ....        ......
T Consensus       202 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~--~~~~~~i~~~~~~-~--------~~~~--------~~~~~~  262 (327)
T 3lm5_A          202 PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN--QETYLNISQVNVD-Y--------SEET--------FSSVSQ  262 (327)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCC-C--------CTTT--------TTTSCH
T ss_pred             CeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc--hHHHHHHHhcccc-c--------Cchh--------hcccCH
Confidence            5677778899999999999999999999999853211  1011111100000 0        0000        012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          263 LATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhC
Confidence            6788999999999999999999874

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.35  E-value=2.4e-13  Score=93.49  Aligned_cols=34  Identities=21%  Similarity=0.228  Sum_probs=29.3

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+. .++.++||||+||+++||++|+.||..
T Consensus       215 PE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~  249 (361)
T 4f9c_A          215 PEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK  249 (361)
T ss_dssp             HHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred             HHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence            6766654 589999999999999999999999853

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.34  E-value=3.6e-13  Score=88.98  Aligned_cols=86  Identities=12%  Similarity=-0.002  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++||||||++++++++|..|+....     ............. . ....            .......
T Consensus       180 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-~-~~~~------------~~~~~~~  240 (283)
T 3bhy_A          180 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGET-----KQETLTNISAVNY-D-FDEE------------YFSNTSE  240 (283)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTCC-C-CCHH------------HHTTCCH
T ss_pred             cceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcc-----hHHHHHHhHhccc-C-Ccch------------hcccCCH
Confidence            566777788999999999999999999999986321     1111111111000 0 0000            0112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       241 ~~~~li~~~l~~dp~~Rps~~~~l~  265 (283)
T 3bhy_A          241 LAKDFIRRLLVKDPKRRMTIAQSLE  265 (283)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHh
Confidence            6789999999999999999999885

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.34  E-value=7.4e-13  Score=89.75  Aligned_cols=86  Identities=12%  Similarity=0.015  Sum_probs=55.8

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+  +.++.++||||||++++|+++|+.||....     ............. ....+.             ....
T Consensus       243 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~-~~~~~~-------------~~~~  303 (345)
T 3hko_A          243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN-----DADTISQVLNKKL-CFENPN-------------YNVL  303 (345)
T ss_dssp             HHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC-CTTSGG-------------GGGS
T ss_pred             chhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhccc-ccCCcc-------------cccC
Confidence            455543  678899999999999999999999986322     1111111111100 000000             0023


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+.+++..||+.+|.+||++.+++.
T Consensus       304 ~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          304 SPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             CHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            456789999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.34  E-value=1.7e-13  Score=90.96  Aligned_cols=77  Identities=18%  Similarity=0.276  Sum_probs=50.9

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      ++.++||||||++++++++|+.||.............  ....      ..+.+..            .....+..++..
T Consensus       202 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~--~~~~------~~~~~~~------------~~~~~~~~li~~  261 (295)
T 2clq_A          202 YGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKV--GMFK------VHPEIPE------------SMSAEAKAFILK  261 (295)
T ss_dssp             CSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHH--HHHC------CCCCCCT------------TSCHHHHHHHHH
T ss_pred             CCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhh--cccc------ccccccc------------cCCHHHHHHHHH
Confidence            7889999999999999999999986422111100000  0000      0111111            234567889999


Q ss_pred             ccCCCccCCCCHHHHHH
Q 042057           89 CSMESPQDRMNITNVVH  105 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~~  105 (127)
                      ||+.+|.+||++.+++.
T Consensus       262 ~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          262 CFEPDPDKRACANDLLV  278 (295)
T ss_dssp             TTCSSTTTSCCHHHHHT
T ss_pred             HccCChhhCCCHHHHhc
Confidence            99999999999999874

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.34  E-value=2.5e-13  Score=92.24  Aligned_cols=90  Identities=11%  Similarity=0.015  Sum_probs=50.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++||||||++++++++|..||........  ..........     .........        ......
T Consensus       198 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~--------~~~~~~  262 (336)
T 3fhr_A          198 PEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAI--SPGMKRRIRL-----GQYGFPNPE--------WSEVSE  262 (336)
T ss_dssp             ------CHHHHHHHHHHHHHHHHHHHHSSCCC----------------------------CCCTTT--------STTCCH
T ss_pred             hhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhh--hhhHHHhhhc-----cccccCchh--------hccCCH
Confidence            6777778889999999999999999999999864321110  0000000000     000000000        012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+|||+.+++.
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          263 DAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhc
Confidence            6788999999999999999999985

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.34  E-value=2.6e-13  Score=92.84  Aligned_cols=105  Identities=10%  Similarity=0.073  Sum_probs=58.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCC-----CcHHHHHHhh-----------------cCC-ccccc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD-----LNLHRFARMA-----------------LPD-HVVYI   57 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~-----~~~~~~~~~~-----------------~~~-~~~~~   57 (127)
                      ||.+.+..++.++||||||++++|+++|+.||.......     ..+.......                 +.. .....
T Consensus       204 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  283 (373)
T 1q8y_A          204 PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN  283 (373)
T ss_dssp             HHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSS
T ss_pred             cHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcc
Confidence            577777789999999999999999999999987432111     0011111000                 000 00000


Q ss_pred             cccccccCCCC--cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           58 VDPILLNDGKG--ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        58 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..........  ......+......+.+++..||+.+|.+|||+.+++.
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          284 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             CCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             cccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence            00000000000  0000122356778899999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.34  E-value=3.6e-13  Score=91.98  Aligned_cols=85  Identities=14%  Similarity=0.079  Sum_probs=57.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++||||+||+++++++|+.||....   ..+...+.   .....  ..+.            .......
T Consensus       202 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~---~~~~~~i~---~~~~~--~~~~------------~~~~~s~  261 (351)
T 3c0i_A          202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK---ERLFEGII---KGKYK--MNPR------------QWSHISE  261 (351)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH---HHHHHHHH---HTCCC--CCHH------------HHTTSCH
T ss_pred             HHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH---HHHHHHHH---cCCCC--CCcc------------ccccCCH
Confidence            577777789999999999999999999999986321   11111111   11000  0000            0012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+||++.+++.
T Consensus       262 ~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          262 SAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhc
Confidence            6789999999999999999999874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.33  E-value=6.4e-13  Score=89.50  Aligned_cols=103  Identities=16%  Similarity=0.039  Sum_probs=59.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccc---------cc-cccccCCCC--
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYI---------VD-PILLNDGKG--   68 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~--   68 (127)
                      ||.+.+..++.++||||||++++|+++|..||......  .....+...........         .. .........  
T Consensus       203 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (339)
T 1z57_A          203 PEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSK--EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSA  280 (339)
T ss_dssp             HHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHH--HHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHH
T ss_pred             hHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccc
Confidence            67777788999999999999999999999998643211  11111111110000000         00 000000000  


Q ss_pred             -----------cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 -----------ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 -----------~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                                 .............+.+++.+||..+|.+|||+.+++.
T Consensus       281 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  328 (339)
T 1z57_A          281 GRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALK  328 (339)
T ss_dssp             HHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             cchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence                       0000011145678899999999999999999999874

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.33  E-value=4.5e-13  Score=90.27  Aligned_cols=86  Identities=9%  Similarity=-0.029  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||||++++++++|..||....     .............  ...+..            ......
T Consensus       187 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~--~~~~~~------------~~~~~~  247 (321)
T 2a2a_A          187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITSVSY--DFDEEF------------FSHTSE  247 (321)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTCC--CCCHHH------------HTTCCH
T ss_pred             cccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhccc--ccChhh------------hcccCH
Confidence            566777888999999999999999999999985321     1111111111000  000000            112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       248 ~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          248 LAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhc
Confidence            6789999999999999999999885

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.33  E-value=1.4e-13  Score=92.78  Aligned_cols=105  Identities=12%  Similarity=-0.007  Sum_probs=57.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHH------------HHHhhcCC---cccccccccccc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHR------------FARMALPD---HVVYIVDPILLN   64 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~---~~~~~~~~~~~~   64 (127)
                      ||.+.. ..++.++||||||+++++|++|+.|+.........+..            ++......   ............
T Consensus       199 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (330)
T 3nsz_A          199 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK  278 (330)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCC
T ss_pred             hhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhcccc
Confidence            455544 56899999999999999999999998532211111111            11100000   000000000000


Q ss_pred             CCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           65 DGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .................+.+++.+||+.+|.+|||+.+++.
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          279 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             CGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             chhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            00000000001124567889999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.33  E-value=2.6e-13  Score=90.29  Aligned_cols=85  Identities=18%  Similarity=0.284  Sum_probs=53.0

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcccc-ccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVY-IVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ..++.++||||||++++++++|+.||.......  ............... ..++....            .....+..+
T Consensus       202 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~l  267 (303)
T 2vwi_A          202 RGYDFKADIWSFGITAIELATGAAPYHKYPPMK--VLMLTLQNDPPSLETGVQDKEMLK------------KYGKSFRKM  267 (303)
T ss_dssp             HCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG--HHHHHHTSSCCCTTC-----CCCC------------CCCHHHHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCCCccCchhh--HHHHHhccCCCccccccccchhhh------------hhhHHHHHH
Confidence            457899999999999999999999986432111  111111000001100 11111111            223467889


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||+.+|.+||++.+++.
T Consensus       268 i~~~l~~dp~~Rps~~~ll~  287 (303)
T 2vwi_A          268 ISLCLQKDPEKRPTAAELLR  287 (303)
T ss_dssp             HHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHccCChhhCcCHHHHhh
Confidence            99999999999999999875

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.33  E-value=3.9e-13  Score=93.13  Aligned_cols=86  Identities=13%  Similarity=0.050  Sum_probs=57.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++|||||||+++||++|..||....  .......+..... .    ......            .....
T Consensus       219 PE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~--~~~~~~~i~~~~~-~----~~~~~~------------~~~s~  279 (387)
T 1kob_A          219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED--DLETLQNVKRCDW-E----FDEDAF------------SSVSP  279 (387)
T ss_dssp             HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--HHHHHHHHHHCCC-C----CCSSTT------------TTSCH
T ss_pred             chhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCC--HHHHHHHHHhCCC-C----CCcccc------------ccCCH
Confidence            677777889999999999999999999999986321  1111111111000 0    000000            02345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       280 ~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          280 EAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhh
Confidence            6789999999999999999999875

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.33  E-value=5.7e-13  Score=91.79  Aligned_cols=86  Identities=10%  Similarity=-0.085  Sum_probs=57.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+..+.++.++|||||||+++||++|+.||....     ............. .. ....            ......
T Consensus       257 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~~~~~~~i~~~~~-~~-~~~~------------~~~~~~  317 (373)
T 2x4f_A          257 PEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-----DAETLNNILACRW-DL-EDEE------------FQDISE  317 (373)
T ss_dssp             HHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC-CS-CSGG------------GTTSCH
T ss_pred             hhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhccC-CC-Chhh------------hccCCH
Confidence            567777888999999999999999999999986321     1111111111100 00 0000            012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       318 ~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          318 EAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCCCHHHHhc
Confidence            6789999999999999999999885

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.33  E-value=1.1e-12  Score=88.97  Aligned_cols=34  Identities=26%  Similarity=0.199  Sum_probs=30.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++||||||++++||++|+.||..
T Consensus       208 PE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~  241 (355)
T 2eu9_A          208 PEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT  241 (355)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             CeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence            6777778899999999999999999999999864

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.33  E-value=5.1e-13  Score=92.53  Aligned_cols=105  Identities=9%  Similarity=-0.010  Sum_probs=63.8

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCC--cHHHHHHhhcCCcccccccc----ccc--cCCCCcchhhhHHHH
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL--NLHRFARMALPDHVVYIVDP----ILL--NDGKGETRINSRLAC   78 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~   78 (127)
                      +.++.++|||||||++||+++|+.||........  .....+....+......+..    .+.  ...+  .........
T Consensus       198 ~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~  275 (396)
T 4eut_A          198 KKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMP--VSCSLSRGL  275 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCC--TTCSSCHHH
T ss_pred             cCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCC--cccccchHH
Confidence            4567789999999999999999999864332221  11111111111111100000    000  0000  001122356


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ...+..++..||+.+|.+||++.+++..+..++..
T Consensus       276 ~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~  310 (396)
T 4eut_A          276 QVLLTPVLANILEADQEKCWGFDQFFAETSDILHR  310 (396)
T ss_dssp             HHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred             HhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence            77888999999999999999999999999887654

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.33  E-value=2e-13  Score=90.34  Aligned_cols=82  Identities=15%  Similarity=0.070  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|..||....     ............      .....            ....
T Consensus       181 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~------~~~~~------------~~~~  237 (284)
T 2vgo_A          181 PEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS-----HTETHRRIVNVD------LKFPP------------FLSD  237 (284)
T ss_dssp             HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTC------CCCCT------------TSCH
T ss_pred             HHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCC-----HhHHHHHHhccc------cCCCC------------cCCH
Confidence            566677788999999999999999999999986321     111111111110      00111            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..|++.+|.+||++.+++.
T Consensus       238 ~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          238 GSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            6788999999999999999999875

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.32  E-value=7.2e-13  Score=88.26  Aligned_cols=81  Identities=14%  Similarity=0.144  Sum_probs=53.8

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      ....++.++||||||++++++++|..|+....     ..................               +......+..
T Consensus       195 ~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~---------------~~~~~~~l~~  254 (302)
T 2j7t_A          195 KDTPYDYKADIWSLGITLIEMAQIEPPHHELN-----PMRVLLKIAKSDPPTLLT---------------PSKWSVEFRD  254 (302)
T ss_dssp             TSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSS---------------GGGSCHHHHH
T ss_pred             CCCCCchhhhHHHHHHHHHHHhcCCCCCccCC-----HHHHHHHHhccCCcccCC---------------ccccCHHHHH
Confidence            35678899999999999999999999986422     111111111110000000               1123456789


Q ss_pred             HhhhccCCCccCCCCHHHHHH
Q 042057           85 IGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ++..||+.+|.+||++.+++.
T Consensus       255 li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          255 FLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHSCSCTTTSCCHHHHTT
T ss_pred             HHHHHcccChhhCCCHHHHhc
Confidence            999999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.32  E-value=4.3e-13  Score=93.91  Aligned_cols=34  Identities=26%  Similarity=0.184  Sum_probs=30.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||+++||++|..||..
T Consensus       268 PE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~  301 (429)
T 3kvw_A          268 PEVILGARYGMPIDMWSLGCILAELLTGYPLLPG  301 (429)
T ss_dssp             HHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCC
Confidence            6777788899999999999999999999999864

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.32  E-value=8.5e-13  Score=88.42  Aligned_cols=85  Identities=21%  Similarity=0.280  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|..||.....     ...........     .+....          +.....
T Consensus       194 PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~-----~~~~~~----------~~~~~~  253 (314)
T 3com_A          194 PEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP-----MRAIFMIPTNP-----PPTFRK----------PELWSD  253 (314)
T ss_dssp             HHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSC-----CCCCSS----------GGGSCH
T ss_pred             hhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHhcCC-----CcccCC----------cccCCH
Confidence            5666777789999999999999999999999863211     11111000000     000000          012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+||++.+++.
T Consensus       254 ~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          254 NFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHh
Confidence            6789999999999999999999874

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.32  E-value=2.3e-13  Score=90.70  Aligned_cols=84  Identities=11%  Similarity=0.042  Sum_probs=54.4

Q ss_pred             CCcccCCC---CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSG---VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~---~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+....   ++.++||||||++++++++|+.||....     ............. ....   ..            .
T Consensus       206 PE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~-----~~~~~~~~~~~~~-~~~~---~~------------~  264 (298)
T 2zv2_A          206 PESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER-----IMCLHSKIKSQAL-EFPD---QP------------D  264 (298)
T ss_dssp             GGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC-CCCS---SS------------C
T ss_pred             hhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc-----HHHHHHHHhcccC-CCCC---cc------------c
Confidence            56665544   3778999999999999999999986321     1111111111100 0000   00            2


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++.+||+.+|.+||++.+++.
T Consensus       265 ~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          265 IAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            2356789999999999999999998763

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.32  E-value=6.1e-13  Score=90.82  Aligned_cols=34  Identities=29%  Similarity=0.411  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+..++.++||||||++++++++|+.||..
T Consensus       199 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  232 (360)
T 3eqc_A          199 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  232 (360)
T ss_dssp             HHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred             HHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            5677778899999999999999999999999864

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.32  E-value=3.8e-13  Score=90.03  Aligned_cols=102  Identities=16%  Similarity=-0.014  Sum_probs=59.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC----Cccccc---cccccccCCCCcchhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP----DHVVYI---VDPILLNDGKGETRIN   73 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~   73 (127)
                      ||.+.++.++.++|||||||+++++++|+.||.....  ......+.....    ..+...   .........+. ....
T Consensus       188 PE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  264 (308)
T 3g33_A          188 PEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSE--ADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPR-PVQS  264 (308)
T ss_dssp             HHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCC-CHHH
T ss_pred             chHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChhhccchhhccccccCCCCCC-cHHH
Confidence            5667778899999999999999999999999864221  111111111110    011000   00000000000 0000


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+.+++.+|++.+|.+|||+.+++.
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  296 (308)
T 3g33_A          265 VVPEMEESGAQLLLEMLTFNPHKRISAFRALQ  296 (308)
T ss_dssp             HSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence            11123457789999999999999999998874

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.31  E-value=2.7e-13  Score=90.85  Aligned_cols=81  Identities=17%  Similarity=0.232  Sum_probs=51.5

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...++.++||||||++++++++|+.||.....    .............     +.+....          .....+..+
T Consensus       203 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~~~-----~~~~~~~----------~~~~~l~~l  263 (318)
T 2dyl_A          203 KPDYDIRADVWSLGISLVELATGQFPYKNCKT----DFEVLTKVLQEEP-----PLLPGHM----------GFSGDFQSF  263 (318)
T ss_dssp             ---CCTHHHHHHHHHHHHHHHHSSCTTTTCCS----HHHHHHHHHHSCC-----CCCCSSS----------CCCHHHHHH
T ss_pred             ccCCccccchhhHHHHHHHHHhCCCCCCCCCc----cHHHHHHHhccCC-----CCCCccC----------CCCHHHHHH
Confidence            45688899999999999999999999864221    1111111111100     0010000          223467889


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||+.+|.+||++.+++.
T Consensus       264 i~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          264 VKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHccCChhHCcCHHHHhh
Confidence            99999999999999999885

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.31  E-value=1.7e-13  Score=93.94  Aligned_cols=88  Identities=17%  Similarity=0.144  Sum_probs=55.1

Q ss_pred             CCcccCCCCCCc-ccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTN-GDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~-~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.+ +||||+||+++++++|+.||....... ..............      ......          ...
T Consensus       186 PE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~------~~~~~~----------~~s  248 (361)
T 3uc3_A          186 PEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVKY------SIPDDI----------RIS  248 (361)
T ss_dssp             HHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTCC------CCCTTS----------CCC
T ss_pred             hhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCCC------CCCCcC----------CCC
Confidence            566666666555 899999999999999999986432211 12222221111100      000000          123


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||..+|.+|||+.+++.
T Consensus       249 ~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          249 PECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHh
Confidence            46788999999999999999999874

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.31  E-value=4.3e-13  Score=92.10  Aligned_cols=86  Identities=9%  Similarity=-0.042  Sum_probs=57.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+|+++++|++|..||....     ............. . ..+.            .......
T Consensus       187 PE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~-----~~~~~~~i~~~~~-~-~~~~------------~~~~~s~  247 (361)
T 2yab_A          187 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANITAVSY-D-FDEE------------FFSQTSE  247 (361)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHTTCC-C-CCHH------------HHTTSCH
T ss_pred             chHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhcCC-C-CCch------------hccCCCH
Confidence            677777789999999999999999999999986321     1111111111100 0 0000            0112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       248 ~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          248 LAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhc
Confidence            6788999999999999999999873

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.31  E-value=4.7e-13  Score=89.95  Aligned_cols=104  Identities=13%  Similarity=0.094  Sum_probs=58.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---ccccccc-----cccccCCCCcch
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVD-----PILLNDGKGETR   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-----~~~~~~~~~~~~   71 (127)
                      ||.+.+ ..++.++||||+|++++++++|+.||....... .+..........   .+....+     ............
T Consensus       188 PE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (311)
T 3niz_A          188 PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPW  266 (311)
T ss_dssp             HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCH
T ss_pred             HHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcH
Confidence            565554 468999999999999999999999986533221 111111111100   0000000     000000000000


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..........+.+++.+|+..+|.+|||+.+++.
T Consensus       267 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          267 SSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             HHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            0011123456789999999999999999998874

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.31  E-value=8.8e-13  Score=87.63  Aligned_cols=105  Identities=15%  Similarity=0.079  Sum_probs=56.9

Q ss_pred             CCcccCCC-CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC---Cccccc---cccccccCCCC-cchh
Q 042057            1 VEYGLGSG-VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP---DHVVYI---VDPILLNDGKG-ETRI   72 (127)
Q Consensus         1 pE~~~~~~-~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~-~~~~   72 (127)
                      ||.+.+.. ++.++||||||++++++++|..|+.........+.........   ..+...   .+.......+. ....
T Consensus       170 PE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (292)
T 3o0g_A          170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLV  249 (292)
T ss_dssp             HHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCT
T ss_pred             hHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchh
Confidence            56555554 7999999999999999999888854322111111111111111   000000   00000000000 0000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .........+.+++..|++.+|.+|||+.+++.
T Consensus       250 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          250 NVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence            011134456789999999999999999998874

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.31  E-value=2e-12  Score=90.27  Aligned_cols=87  Identities=13%  Similarity=0.137  Sum_probs=57.4

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .+.++.++||||||++++++++|..||..... ...+...+.......     .+            .....
T Consensus       310 PE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~-~~~~~~~i~~~~~~~-----~~------------~~~~~  371 (419)
T 3i6u_A          310 PEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRT-QVSLKDQITSGKYNF-----IP------------EVWAE  371 (419)
T ss_dssp             TTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSS-SCCHHHHHHTTCCCC-----CH------------HHHTT
T ss_pred             ceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcc-hHHHHHHHhcCCCCC-----Cc------------hhhcc
Confidence            67764   36788899999999999999999999864322 112222221111000     00            00112


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++.+||+.+|.+||++.+++.
T Consensus       372 ~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          372 VSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            3456789999999999999999998874

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.31  E-value=1.4e-13  Score=93.41  Aligned_cols=82  Identities=16%  Similarity=0.154  Sum_probs=55.2

Q ss_pred             CCcccCCCCC-CcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVS-TNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s-~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++ .++||||+||++++|++|+.||....     ..........+..      .+..            ...
T Consensus       182 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~------~~p~------------~~s  238 (328)
T 3fe3_A          182 PELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQN-----LKELRERVLRGKY------RIPF------------YMS  238 (328)
T ss_dssp             HHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC------CCCT------------TSC
T ss_pred             cccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC------CCCC------------CCC
Confidence            5666666654 78999999999999999999986421     1222211111100      0100            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||..+|.+|||+.+++.
T Consensus       239 ~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          239 TDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            46788999999999999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.31  E-value=2.8e-12  Score=88.37  Aligned_cols=34  Identities=29%  Similarity=0.265  Sum_probs=30.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++|||||||+++||++|+.||..
T Consensus       227 PE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          227 PEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             hHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence            6777788899999999999999999999999864

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.30  E-value=9.8e-13  Score=88.54  Aligned_cols=79  Identities=16%  Similarity=0.214  Sum_probs=51.0

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      .+.++.++||||||++++++++|..|+.....     ............     +.....           .....+..+
T Consensus       208 ~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~-----~~~~~~-----------~~~~~l~~l  266 (326)
T 2x7f_A          208 DATYDFKSDLWSLGITAIEMAEGAPPLCDMHP-----MRALFLIPRNPA-----PRLKSK-----------KWSKKFQSF  266 (326)
T ss_dssp             ---CCTTHHHHHHHHHHHHHHHSSCTTTTSCH-----HHHHHHHHHSCC-----CCCSCS-----------CSCHHHHHH
T ss_pred             CcCCCccchHHHHHHHHHHHHhCCCCCCCCcH-----HHHHHHhhcCcc-----ccCCcc-----------ccCHHHHHH
Confidence            45688999999999999999999999853221     111110000100     111100           223467889


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||..+|.+||++.+++.
T Consensus       267 i~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          267 IESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHHhccChhhCCCHHHHhh
Confidence            99999999999999999885

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.30  E-value=4.9e-13  Score=90.46  Aligned_cols=90  Identities=11%  Similarity=0.113  Sum_probs=53.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccC--CCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEG--DLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+....++.++||||||++++++++|+.||......  .............+...      .  .      .......
T Consensus       178 PE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~------~--~------~~~~~~~  243 (325)
T 3kn6_A          178 PELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFS------F--E------GEAWKNV  243 (325)
T ss_dssp             ------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCC------C--C------SHHHHTS
T ss_pred             HHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCC------C--C------cccccCC
Confidence            78888888999999999999999999999998643221  11122222222211100      0  0      0011133


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ...+.+++..||..+|.+||++.+++
T Consensus       244 s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          244 SQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             CHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             CHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            55788999999999999999998876

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.30  E-value=3.7e-13  Score=90.23  Aligned_cols=85  Identities=12%  Similarity=0.085  Sum_probs=52.8

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcH----------HHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNL----------HRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      +.++.++||||||+++++|++|+.||..........          ........... .....             ....
T Consensus       201 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~~~~~-------------~~~~  266 (316)
T 2ac3_A          201 SIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK-YEFPD-------------KDWA  266 (316)
T ss_dssp             HHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC-CCCCH-------------HHHT
T ss_pred             cCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccC-cccCc-------------hhcc
Confidence            447889999999999999999999986543221100          00000000000 00000             0001


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....+.+++.+||+.+|.+||++.+++.
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          267 HISCAAKDLISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence            23456789999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.30  E-value=2.8e-13  Score=89.38  Aligned_cols=80  Identities=9%  Similarity=0.048  Sum_probs=52.3

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+... .++.++||||||++++++++|..++...    . ....+.   ....     +.+..            ...
T Consensus       199 PE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~----~-~~~~~~---~~~~-----~~~~~------------~~~  253 (289)
T 1x8b_A          199 NEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG----D-QWHEIR---QGRL-----PRIPQ------------VLS  253 (289)
T ss_dssp             HHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS----H-HHHHHH---TTCC-----CCCSS------------CCC
T ss_pred             hhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch----h-HHHHHH---cCCC-----CCCCc------------ccC
Confidence            4555444 5567999999999999999998764321    1 111111   1110     11111            233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++..||+.+|.+||++.+++.
T Consensus       254 ~~~~~li~~~l~~dp~~Rps~~~ll~  279 (289)
T 1x8b_A          254 QEFTELLKVMIHPDPERRPSAMALVK  279 (289)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCcccCCCHHHHhh
Confidence            56788999999999999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.30  E-value=5.4e-13  Score=92.04  Aligned_cols=104  Identities=15%  Similarity=0.158  Sum_probs=55.9

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----------ccc---------cccc
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----------HVV---------YIVD   59 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~---------~~~~   59 (127)
                      ||.+.+  ..++.++|||||||+++||++|+.||........ +..........          ...         ....
T Consensus       204 PE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (389)
T 3gni_B          204 PEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLS  282 (389)
T ss_dssp             HHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC---------------------------------
T ss_pred             HHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCCccccccccccccccccccccccccccc
Confidence            555655  5789999999999999999999999865322111 11100000000          000         0000


Q ss_pred             cccccCC-----CCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           60 PILLNDG-----KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        60 ~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+....     ........+......+.+++.+||+.+|.+|||+.+++.
T Consensus       283 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          283 DSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             -----------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            0000000     000000112234567889999999999999999999874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.29  E-value=2e-13  Score=92.07  Aligned_cols=76  Identities=20%  Similarity=0.226  Sum_probs=52.4

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.+ +.++||||||++++|+++|+.||....       ....    ...      ....            ...
T Consensus       217 PE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~-------~~~~----~~~------~~~~------------~~~  267 (320)
T 3a99_A          217 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR----GQV------FFRQ------------RVS  267 (320)
T ss_dssp             HHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH----CCC------CCSS------------CCC
T ss_pred             hHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh-------hhhc----ccc------cccc------------cCC
Confidence            444444444 678899999999999999999985321       0110    000      0001            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+..++..||+.+|.+||++.+++.
T Consensus       268 ~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          268 SECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            46788999999999999999999875

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.29  E-value=1.1e-12  Score=88.30  Aligned_cols=81  Identities=16%  Similarity=0.069  Sum_probs=54.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++|+++|..|....       ............                 .........
T Consensus       245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~~~~~~~~-----------------~~~~~~~~~  300 (332)
T 3qd2_B          245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIITDVRNLKF-----------------PLLFTQKYP  300 (332)
T ss_dssp             HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHHHHHTTCC-----------------CHHHHHHCH
T ss_pred             hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHHHhhccCC-----------------CcccccCCh
Confidence            56667778899999999999999999987763210       011110000000                 011223445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.++++
T Consensus       301 ~~~~li~~~l~~~p~~Rps~~~~l~  325 (332)
T 3qd2_B          301 QEHMMVQDMLSPSPTERPEATDIIE  325 (332)
T ss_dssp             HHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred             hHHHHHHHHccCCCCcCCCHHHHhh
Confidence            6788999999999999999999875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.29  E-value=1.5e-12  Score=90.57  Aligned_cols=102  Identities=14%  Similarity=0.031  Sum_probs=56.8

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---ccccccc--------cccccCCCC
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVD--------PILLNDGKG   68 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~~   68 (127)
                      ||.+.+. .++.++||||+||+++||++|+.||....  .......+......   .....+.        ..+....+.
T Consensus       231 PEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~--~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~  308 (398)
T 4b99_A          231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN--YVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPV  308 (398)
T ss_dssp             HHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSS--HHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCC
T ss_pred             HHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCC--HHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCC
Confidence            5666554 57999999999999999999999986422  11111111111110   0000000        000000000


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ............+.+++.+||..+|.+|||+.+++.
T Consensus       309 -~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          309 -PWETVYPGADRQALSLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             -CHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             -CHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence             000000112356788999999999999999998874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.29  E-value=7.1e-12  Score=87.91  Aligned_cols=84  Identities=13%  Similarity=0.056  Sum_probs=54.0

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||.+.   ...++.++|||||||+++|+++ |..|+....   ......   ...........+              ..
T Consensus       195 PE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~---~~~~~~---~~~~~~~~~~~~--------------~~  254 (432)
T 3p23_A          195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL---QRQANI---LLGACSLDCLHP--------------EK  254 (432)
T ss_dssp             GGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT---THHHHH---HTTCCCCTTSCT--------------TC
T ss_pred             hhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh---HHHHHH---HhccCCccccCc--------------cc
Confidence            67665   4567889999999999999999 888875321   101111   111100010100              01


Q ss_pred             HHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           77 ACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      .....+.+++..||+.+|.+||++.+++
T Consensus       255 ~~~~~~~~li~~~L~~dP~~Rps~~evl  282 (432)
T 3p23_A          255 HEDVIARELIEKMIAMDPQKRPSAKHVL  282 (432)
T ss_dssp             HHHHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             cccHHHHHHHHHHHhCCHhhCCCHHHHH
Confidence            3445678899999999999999999998

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.28  E-value=1.4e-12  Score=86.56  Aligned_cols=83  Identities=17%  Similarity=0.131  Sum_probs=53.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhh-cCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMA-LPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+ .+.++.++||||||++++++++|+.||....     ........ ...........                ...
T Consensus       195 PE~~-~~~~~~~~Di~slG~il~~ll~g~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~----------------~~~  252 (285)
T 3is5_A          195 PEVF-KRDVTFKCDIWSAGVVMYFLLTGCLPFTGTS-----LEEVQQKATYKEPNYAVECR----------------PLT  252 (285)
T ss_dssp             HHHH-TTCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCCCCC--C----------------CCC
T ss_pred             hHHh-ccCCCcccCeehHHHHHHHHHhCCCCCCCCC-----HHHHHhhhccCCcccccccC----------------cCC
Confidence            4544 3567889999999999999999999986321     11111111 11000000000                123


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++..||+.+|.+||++.+++.
T Consensus       253 ~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          253 PQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            46678999999999999999999874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.28  E-value=2.1e-12  Score=86.93  Aligned_cols=82  Identities=12%  Similarity=0.131  Sum_probs=54.8

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...++.++||||||++++++++|..||...... ..+...+...... .    .+.            ........+.++
T Consensus       193 ~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~-~----~~~------------~~~~~~~~~~~l  254 (322)
T 2ycf_A          193 TAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ-VSLKDQITSGKYN-F----IPE------------VWAEVSEKALDL  254 (322)
T ss_dssp             TTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS-SCHHHHHHHTCCC-C----CHH------------HHTTSCHHHHHH
T ss_pred             CCCCCchhhHHHHHHHHHHHHhCCCCCcccchH-HHHHHHHHhCccc-c----Cch------------hhhhcCHHHHHH
Confidence            466889999999999999999999998643221 1222222111100 0    000            011234577899


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||..+|.+||++.+++.
T Consensus       255 i~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          255 VKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHcccCHhhCCCHHHHhh
Confidence            99999999999999999873

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.28  E-value=9e-13  Score=88.43  Aligned_cols=91  Identities=20%  Similarity=0.238  Sum_probs=57.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.||....     .............   ..+..           .......
T Consensus       188 PE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~-----~~~~~~~~~~~~~---~~~~~-----------~~~~~~~  248 (311)
T 3ork_A          188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-----PVSVAYQHVREDP---IPPSA-----------RHEGLSA  248 (311)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCC---CCHHH-----------HSTTCCH
T ss_pred             HHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCC-----hHHHHHHHhcCCC---CCccc-----------ccCCCCH
Confidence            566677788999999999999999999999986321     1111111111100   00000           0012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHH-HHHHHh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVV-HELQSV  110 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~-~~L~~~  110 (127)
                      .+..++.+||+.+|.+||+..+++ ..+..+
T Consensus       249 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          249 DLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            678999999999999999765544 445443

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.28  E-value=8.7e-13  Score=89.82  Aligned_cols=82  Identities=13%  Similarity=0.131  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|+||+||+++||++|+.||....     ............      .....            ....
T Consensus       174 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~s~  230 (337)
T 1o6l_A          174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEE------IRFPR------------TLSP  230 (337)
T ss_dssp             GGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC------CCCCT------------TSCH
T ss_pred             hhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC------CCCCC------------CCCH
Confidence            788888889999999999999999999999986321     111111111110      00110            2335


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++.+||+.+|.+||     ++.+++.
T Consensus       231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            678899999999999999     7887763

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.28  E-value=2.2e-13  Score=90.62  Aligned_cols=82  Identities=16%  Similarity=0.108  Sum_probs=56.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.|+....     ............      ..+..            ....
T Consensus       184 PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~------~~~~~------------~~~~  240 (294)
T 2rku_A          184 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNE------YSIPK------------HINP  240 (294)
T ss_dssp             HHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTC------CCCCT------------TSCH
T ss_pred             cchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHhhcc------CCCcc------------ccCH
Confidence            566666778999999999999999999999986321     111111111110      00111            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       241 ~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          241 VAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHcccChhhCcCHHHHhh
Confidence            6788999999999999999998875

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.27  E-value=1.3e-12  Score=89.03  Aligned_cols=104  Identities=18%  Similarity=0.116  Sum_probs=57.4

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC--ccccccccc-----cc--cCCCC-c
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD--HVVYIVDPI-----LL--NDGKG-E   69 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~--~~~~~-~   69 (127)
                      ||.+.+. .++.++||||||++++++++|+.||...... ..+....+.....  .....+.+.     ..  ...+. .
T Consensus       200 PE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (360)
T 3e3p_A          200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSN  278 (360)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHH
T ss_pred             HHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCccc
Confidence            5555444 4899999999999999999999998643211 1111111110000  000000000     00  00000 0


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++..||+.+|.+|||+.+++.
T Consensus       279 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          279 VFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             ccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence            000000124567899999999999999999999874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.27  E-value=1.1e-11  Score=85.14  Aligned_cols=98  Identities=13%  Similarity=0.052  Sum_probs=59.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc--------------------------c
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH--------------------------V   54 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~   54 (127)
                      ||.+.+..++.++|||||||+++++++|+.||......  .....+.......                          +
T Consensus       195 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (371)
T 2xrw_A          195 PEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI--DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSF  272 (371)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCH
T ss_pred             HHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccch
Confidence            57777778999999999999999999999998642210  0000000000000                          0


Q ss_pred             ccccccccccCCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           55 VYIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...........     ...........+.+++.+||..+|.+|||+.+++.
T Consensus       273 ~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          273 EKLFPDVLFPA-----DSEHNKLKASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHSCGGGSCC-----SSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             hhhcccccCcc-----cccccccccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            00000000000     01122334667899999999999999999999875

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.27  E-value=6.3e-13  Score=89.90  Aligned_cols=104  Identities=18%  Similarity=0.044  Sum_probs=56.8

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc-CC--ccccccc-cccccCCCC--c--ch
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL-PD--HVVYIVD-PILLNDGKG--E--TR   71 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~-~~~~~~~~~--~--~~   71 (127)
                      ||.+.+. .++.++|||||||+++|+++|+.||...... ..+........ +.  .+..... +......+.  .  ..
T Consensus       206 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (329)
T 3gbz_A          206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEI-DQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLK  284 (329)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHH
T ss_pred             HHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHH-HHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHh
Confidence            5666554 4899999999999999999999998642211 11111111100 00  0000000 000000000  0  00


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+......+.+++.+||+.+|.+|||+.+++.
T Consensus       285 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          285 RVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence            0001113456789999999999999999998864

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.27  E-value=1.7e-12  Score=87.66  Aligned_cols=103  Identities=14%  Similarity=0.032  Sum_probs=57.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cccccccccc----c-cCCCCcc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIVDPIL----L-NDGKGET   70 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~----~-~~~~~~~   70 (127)
                      ||.+.+ ..++.++||||+|+++++|++|+.||.....  ......+......    .+........    . .......
T Consensus       169 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (324)
T 3mtl_A          169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV--EEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEA  246 (324)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCC
T ss_pred             hhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchh
Confidence            455554 5689999999999999999999999864321  1111111111110    1111110000    0 0000000


Q ss_pred             hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           71 RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        71 ~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...........+.+++.+|++.+|.+|||+.+++.
T Consensus       247 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          247 LLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence            00011123456789999999999999999999874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.27  E-value=1.8e-12  Score=86.28  Aligned_cols=91  Identities=7%  Similarity=-0.006  Sum_probs=58.4

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++||||||+++|||++|+.||........             . ......+......  ...........+..++
T Consensus       177 ~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-------------~-~~~~~~~~~~~~~--~~~~~~~~~~~l~~li  240 (286)
T 3uqc_A          177 PDANPQDDIRGIGASLYALLVNRWPLPEAGVRSG-------------L-APAERDTAGQPIE--PADIDRDIPFQISAVA  240 (286)
T ss_dssp             TTCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCC-------------S-EECCBCTTSCBCC--HHHHCTTSCHHHHHHH
T ss_pred             CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcchh-------------h-HHHHHHhccCCCC--hhhcccCCCHHHHHHH
Confidence            3578899999999999999999999864321110             0 0000000000000  0001113445688999


Q ss_pred             hhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           87 VACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      .+||+.+|.+| |+.+++..|..+....
T Consensus       241 ~~~l~~dP~~R-s~~el~~~L~~~~~~~  267 (286)
T 3uqc_A          241 ARSVQGDGGIR-SASTLLNLMQQATAVA  267 (286)
T ss_dssp             HHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred             HHHcccCCccC-CHHHHHHHHHHHhccC
Confidence            99999999999 9999999999876554

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.27  E-value=4.1e-12  Score=85.43  Aligned_cols=102  Identities=14%  Similarity=0.031  Sum_probs=58.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC----Ccccccc---ccccccCCCCcchhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP----DHVVYIV---DPILLNDGKGETRIN   73 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~   73 (127)
                      ||.+.++.++.++||||||++++++++|+.||.....  ......+.....    ..+....   ........ ......
T Consensus       188 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  264 (326)
T 1blx_A          188 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD--VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKS-AQPIEK  264 (326)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCC-CCCGGG
T ss_pred             HHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHHHcCCCCcccCccccccchhhhcccC-cchhhh
Confidence            5667777899999999999999999999999864221  111111111100    0000000   00000000 000000


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+.+++.+||+.+|.+||++.+++.
T Consensus       265 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  296 (326)
T 1blx_A          265 FVTDIDELGKDLLLKCLTFNPAKRISAYSALS  296 (326)
T ss_dssp             TCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            11133456789999999999999999999873

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.27  E-value=9.2e-13  Score=86.72  Aligned_cols=82  Identities=15%  Similarity=0.129  Sum_probs=55.3

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..+ +.++||||||++++++++|+.|+....     ............ .     .+..            ...
T Consensus       179 PE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~-~-----~~~~------------~~~  235 (276)
T 2h6d_A          179 PEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH-----VPTLFKKIRGGV-F-----YIPE------------YLN  235 (276)
T ss_dssp             TGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC-C-----CCCT------------TSC
T ss_pred             HHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc-----HHHHHHHhhcCc-c-----cCch------------hcC
Confidence            677766654 688999999999999999999986321     111111111110 0     0000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+..++..||+.+|.+||++.+++.
T Consensus       236 ~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          236 RSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHh
Confidence            46788999999999999999999875

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.26  E-value=3.3e-12  Score=84.67  Aligned_cols=85  Identities=13%  Similarity=-0.003  Sum_probs=54.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||||++++++++|+.|+....     ..........+...    .....          ......
T Consensus       192 PE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~----~~~~~----------~~~~~~  251 (287)
T 2wei_A          192 PEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKYA----FDLPQ----------WRTISD  251 (287)
T ss_dssp             HHHHT-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC----CCSGG----------GTTSCH
T ss_pred             hHHhc-CCCCCchhhHhHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC----CCchh----------hhhcCH
Confidence            44443 458899999999999999999999986421     11111111111000    00000          012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       252 ~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          252 DAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcccChhhCcCHHHHhc
Confidence            6789999999999999999999875

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.26  E-value=2.6e-12  Score=86.48  Aligned_cols=103  Identities=15%  Similarity=0.126  Sum_probs=56.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC---C-ccccc-----cccccccCCCCc-
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP---D-HVVYI-----VDPILLNDGKGE-   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-----~~~~~~~~~~~~-   69 (127)
                      ||.+.+ ..++.++|||||||+++||++|+.||.....  ......+.....   . .+...     ..+.+....+.. 
T Consensus       177 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (317)
T 2pmi_A          177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTND--EEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDL  254 (317)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCS
T ss_pred             chHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhH
Confidence            555554 4589999999999999999999999864321  111111111110   0 00000     000000000000 


Q ss_pred             c---hhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 T---RINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~---~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .   ...........+.+++.+||+.+|.+|||+.+++.
T Consensus       255 ~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          255 RQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence            0   00000023456889999999999999999998874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.26  E-value=2.1e-12  Score=85.72  Aligned_cols=103  Identities=17%  Similarity=0.064  Sum_probs=57.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--C-cccc-----ccccccccCCCCcch
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--D-HVVY-----IVDPILLNDGKGETR   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~-----~~~~~~~~~~~~~~~   71 (127)
                      ||.+.+ ..++.++||||+|++++||++|+.||...... ..+.........  . .+..     ..++......+. ..
T Consensus       169 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  246 (288)
T 1ob3_A          169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA-DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL-PW  246 (288)
T ss_dssp             HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC-CG
T ss_pred             chheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHHCCCChhhchhhhcccccccccccccCc-cH
Confidence            555544 45899999999999999999999998643211 111111111100  0 0000     001111000000 00


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..........+.+++.+||+.+|.+|||+.+++.
T Consensus       247 ~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE  280 (288)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            0000123456789999999999999999998864

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.25  E-value=2.6e-13  Score=91.99  Aligned_cols=82  Identities=16%  Similarity=0.108  Sum_probs=55.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||||++++++++|+.||....     ............      ..+..            ....
T Consensus       210 PE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-----~~~~~~~~~~~~------~~~~~------------~~~~  266 (335)
T 2owb_A          210 PEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSC-----LKETYLRIKKNE------YSIPK------------HINP  266 (335)
T ss_dssp             HHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTC------CCCCT------------TSCH
T ss_pred             HHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCC-----HHHHHHHHhcCC------CCCCc------------cCCH
Confidence            456666778899999999999999999999986321     111111111000      00111            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..||+.+|.+||++.+++.
T Consensus       267 ~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          267 VAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            5778999999999999999998875

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.25  E-value=2.8e-12  Score=88.86  Aligned_cols=104  Identities=12%  Similarity=-0.001  Sum_probs=57.5

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcc-------ccccccccccCCCCcchh
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHV-------VYIVDPILLNDGKGETRI   72 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~   72 (127)
                      ||.+.+. .++.++|||||||+++||++|+.||...... ..+...+........       ............+.....
T Consensus       210 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (394)
T 4e7w_A          210 PELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI-DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSK  288 (394)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHH
T ss_pred             HHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHH
Confidence            5555443 5899999999999999999999998643211 111111111000000       000000000000000000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+......+.+++.+||..+|.+|||+.+++.
T Consensus       289 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          289 VFRPRTPPDAIDLISRLLEYTPSARLTAIEALC  321 (394)
T ss_dssp             HSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence            001123457899999999999999999998874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.25  E-value=2.8e-12  Score=85.75  Aligned_cols=103  Identities=14%  Similarity=0.090  Sum_probs=56.7

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccc---------cc-cccccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVV---------YI-VDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||++++++++|+.||......  .....+.........         .. ....+.......
T Consensus       171 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (311)
T 4agu_A          171 PELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV--DQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDME  248 (311)
T ss_dssp             HHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCC
T ss_pred             hHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhcccccccccccccccccccCcCCCccccc
Confidence            455544 56799999999999999999999998643211  111111111100000         00 000000000000


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++..||+.+|.+|||+.+++.
T Consensus       249 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             CHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred             hhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence            000000123456789999999999999999999874

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.25  E-value=5.8e-13  Score=90.78  Aligned_cols=89  Identities=16%  Similarity=0.078  Sum_probs=55.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||+++||++|..||.....  ............+..      ......+        .....
T Consensus       189 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~~~~i~~~~~------~~~~~~~--------~~~s~  252 (342)
T 2qr7_A          189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD--DTPEEILARIGSGKF------SLSGGYW--------NSVSD  252 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT--SCHHHHHHHHHHCCC------CCCSTTT--------TTSCH
T ss_pred             HHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc--CCHHHHHHHHccCCc------ccCcccc--------ccCCH
Confidence            3444445577899999999999999999999864211  111111111111100      0000000        12345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+||++.+++.
T Consensus       253 ~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          253 TAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhc
Confidence            6788999999999999999998874

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.25  E-value=6e-13  Score=89.98  Aligned_cols=101  Identities=15%  Similarity=0.086  Sum_probs=57.7

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC-----------C-ccccccccccccCCC
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-----------D-HVVYIVDPILLNDGK   67 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~~~~~~~~~~~~~~~   67 (127)
                      ||.+.+. .++.++||||+|++++++++|+.||....... .+.........           . .......+.+....+
T Consensus       193 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (331)
T 4aaa_A          193 PELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREP  271 (331)
T ss_dssp             HHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCC
T ss_pred             cccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhHhhhccccccccCccccccch
Confidence            4555554 68899999999999999999999986432110 01111100000           0 000000111111100


Q ss_pred             CcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           68 GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        68 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                         ...........+.+++.+||+.+|.+|||+.+++.
T Consensus       272 ---~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          272 ---LERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             ---HHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             ---hhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence               01111133567899999999999999999998874

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.25  E-value=5.3e-12  Score=89.27  Aligned_cols=99  Identities=15%  Similarity=0.098  Sum_probs=59.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc------------------CC-------ccc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL------------------PD-------HVV   55 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~-------~~~   55 (127)
                      ||.+.+..++.++||||+||+++||++|+.||....... .+...+....                  ..       .+.
T Consensus       232 PE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~-~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (464)
T 3ttj_A          232 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFP  310 (464)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHH
T ss_pred             HHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChH
Confidence            677778889999999999999999999999986432100 0000000000                  00       000


Q ss_pred             cccccccccCCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           56 YIVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......+...     ...........+.+++.+||..+|.+|||+.+++.
T Consensus       311 ~~~~~~~~~~-----~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          311 KLFPDSLFPA-----DSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHSCGGGSCC-----SSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhCccccccc-----ccccccccCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0000000000     01112233567899999999999999999999874

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.25  E-value=5.9e-12  Score=85.42  Aligned_cols=99  Identities=15%  Similarity=0.116  Sum_probs=57.4

Q ss_pred             CCcccCC-CCCC-cccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---ccccccccccccCCCCcchhhhH
Q 042057            1 VEYGLGS-GVST-NGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVYIVDPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~~-~~s~-~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~   75 (127)
                      ||.+.++ .++. ++||||||++++++++|+.|+...... ......+......   .......+.....     .....
T Consensus       219 PE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  292 (348)
T 2pml_X          219 PEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL-VELFNNIRTKNIEYPLDRNHFLYPLTNKK-----STCSN  292 (348)
T ss_dssp             GGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS-HHHHHHHTSCCCCCCCSSSSSTTTTCC------------
T ss_pred             chhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHhccCcCCccchhhhhccccccc-----cccch
Confidence            6777666 5665 899999999999999999998643211 1122222111000   0000000000000     00001


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ......+.+++..||+.+|.+||++.+++.
T Consensus       293 ~~~~~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          293 NFLSNEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             -CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            133457789999999999999999999985

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.25  E-value=6.7e-12  Score=89.02  Aligned_cols=85  Identities=13%  Similarity=-0.005  Sum_probs=56.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||+||+++++++|..||....     ..........+...    ....          .....+.
T Consensus       192 PE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~----~~~~----------~~~~~s~  251 (486)
T 3mwu_A          192 PEVLR-GTYDEKCDVWSAGVILYILLSGTPPFYGKN-----EYDILKRVETGKYA----FDLP----------QWRTISD  251 (486)
T ss_dssp             GGGGG-SCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCCC----SCSG----------GGGGSCH
T ss_pred             HHHhC-CCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCC----CCCc----------ccCCCCH
Confidence            67665 468999999999999999999999985321     11111111111000    0000          0012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       252 ~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          252 DAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhc
Confidence            6789999999999999999999885

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.24  E-value=8.8e-13  Score=87.94  Aligned_cols=74  Identities=14%  Similarity=0.142  Sum_probs=50.3

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhhh
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGVA   88 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~   88 (127)
                      ++.++||||||++++++++|+.|+....     ............      ..+..            .....+..++..
T Consensus       190 ~~~~~Di~slG~il~~l~~g~~p~~~~~-----~~~~~~~i~~~~------~~~~~------------~~~~~l~~li~~  246 (305)
T 2wtk_C          190 SGFKVDIWSAGVTLYNITTGLYPFEGDN-----IYKLFENIGKGS------YAIPG------------DCGPPLSDLLKG  246 (305)
T ss_dssp             ESHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCC------CCCCS------------SSCHHHHHHHHH
T ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHhcCC------CCCCC------------ccCHHHHHHHHH
Confidence            3678999999999999999999986321     111111111110      01111            233467889999


Q ss_pred             ccCCCccCCCCHHHHHH
Q 042057           89 CSMESPQDRMNITNVVH  105 (127)
Q Consensus        89 c~~~~p~~RPs~~~v~~  105 (127)
                      ||+.+|.+||++.+++.
T Consensus       247 ~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          247 MLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HTCSSTTTSCCHHHHHH
T ss_pred             HccCChhhCCCHHHHhc
Confidence            99999999999999875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.24  E-value=1.8e-12  Score=85.43  Aligned_cols=85  Identities=9%  Similarity=0.035  Sum_probs=54.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||||++++++++|+.||.....     ............ .....             .......
T Consensus       177 PE~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~-~~~~~-------------~~~~~~~  236 (277)
T 3f3z_A          177 PQVLE-GLYGPECDEWSAGVMMYVLLCGYPPFSAPTD-----SEVMLKIREGTF-TFPEK-------------DWLNVSP  236 (277)
T ss_dssp             HHHHT-TCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH-----HHHHHHHHHCCC-CCCHH-------------HHTTSCH
T ss_pred             hHHhc-ccCCchhhehhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhCCC-CCCch-------------hhhcCCH
Confidence            44443 4588999999999999999999999864211     111111111100 00000             0002345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..++..|++.+|.+||++.+++.
T Consensus       237 ~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          237 QAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhc
Confidence            6788999999999999999998874

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.24  E-value=2.5e-12  Score=88.23  Aligned_cols=79  Identities=13%  Similarity=0.174  Sum_probs=51.2

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.++||||||+++|++++|+.||....     ..........+.. ....+             ........+..++.
T Consensus       281 ~~~~~~Di~slG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~~-~~~~~-------------~~~~~~~~~~~li~  341 (365)
T 2y7j_A          281 GYGKEVDLWACGVILFTLLAGSPPFWHRR-----QILMLRMIMEGQY-QFSSP-------------EWDDRSSTVKDLIS  341 (365)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC-CCCHH-------------HHSSSCHHHHHHHH
T ss_pred             CCCchhhHHhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCC-CCCCc-------------ccccCCHHHHHHHH
Confidence            57889999999999999999999985321     1111111111100 00000             00022346788999


Q ss_pred             hccCCCccCCCCHHHHHH
Q 042057           88 ACSMESPQDRMNITNVVH  105 (127)
Q Consensus        88 ~c~~~~p~~RPs~~~v~~  105 (127)
                      .||+.+|.+||++.+++.
T Consensus       342 ~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          342 RLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHSCSSTTTSCCHHHHHH
T ss_pred             HHcCCChhHCcCHHHHhc
Confidence            999999999999998875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.24  E-value=6.3e-12  Score=83.87  Aligned_cols=86  Identities=14%  Similarity=0.082  Sum_probs=52.7

Q ss_pred             cCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHH
Q 042057            5 LGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVR   84 (127)
Q Consensus         5 ~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   84 (127)
                      ....++.++||||||++++|+++|+.||........         ...............  +    ..........+.+
T Consensus       171 ~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~---------~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~  235 (299)
T 3m2w_A          171 TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI---------SPGMKTRIRMGQYEF--P----NPEWSEVSEEVKM  235 (299)
T ss_dssp             TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC----------------CCSCCSSCTTCCSS--C----HHHHTTSCHHHHH
T ss_pred             ccccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh---------hHHHHHHHhhccccC--C----chhcccCCHHHHH
Confidence            345678899999999999999999999854221100         000000000000000  0    0001123567889


Q ss_pred             HhhhccCCCccCCCCHHHHHH
Q 042057           85 IGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        85 l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ++..||+.+|.+||++.+++.
T Consensus       236 li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          236 LIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHcccChhhCCCHHHHhc
Confidence            999999999999999999885

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.24  E-value=8e-13  Score=92.84  Aligned_cols=82  Identities=11%  Similarity=0.111  Sum_probs=56.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++||++|+.||....     ............      .....            ....
T Consensus       318 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~~~  374 (446)
T 4ejn_A          318 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HEKLFELILMEE------IRFPR------------TLGP  374 (446)
T ss_dssp             HHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC------CCCCT------------TSCH
T ss_pred             HhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHHhCC------CCCCc------------cCCH
Confidence            677778889999999999999999999999985321     111111111110      00101            2235


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++..||+.+|.+||     ++.+++.
T Consensus       375 ~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             HHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            678899999999999999     8888764

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.24  E-value=3e-12  Score=89.43  Aligned_cols=101  Identities=13%  Similarity=0.002  Sum_probs=58.1

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC----------CccccccccccccCCCCc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP----------DHVVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~   69 (127)
                      ||++.+. .++.++|||||||+++||++|+.||..... ...+...+.....          .......-+.+.....  
T Consensus       225 PE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~-~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~--  301 (420)
T 1j1b_A          225 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG-VDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPW--  301 (420)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCH--
T ss_pred             HHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCH--
Confidence            5666554 689999999999999999999999864321 1112222211100          0000000111110000  


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ....+......+.+++.+||..+|.+||++.+++.
T Consensus       302 -~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          302 -TKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  336 (420)
T ss_dssp             -HHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -HHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence             00000123457889999999999999999998874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.24  E-value=9.8e-13  Score=93.33  Aligned_cols=82  Identities=15%  Similarity=0.104  Sum_probs=55.1

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..+ +.++||||+||+++++++|+.||....     ..........+..      ....            ...
T Consensus       184 PE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~~------~~p~------------~~s  240 (476)
T 2y94_A          184 PEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH-----VPTLFKKICDGIF------YTPQ------------YLN  240 (476)
T ss_dssp             HHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS-----SHHHHHHHHTTCC------CCCT------------TCC
T ss_pred             hhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC-----HHHHHHHHhcCCc------CCCc------------cCC
Confidence            455555554 678999999999999999999986421     1111111111100      0000            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++..||..+|.+|||+.+++.
T Consensus       241 ~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          241 PSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            46788999999999999999999885

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.24  E-value=2.6e-12  Score=88.60  Aligned_cols=101  Identities=16%  Similarity=0.023  Sum_probs=57.1

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc----------cccccccccccCCCCc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH----------VVYIVDPILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~   69 (127)
                      ||.+.+. .++.++||||+||+++||++|+.||...... ..+...+.......          .....-+.+....   
T Consensus       210 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~---  285 (383)
T 3eb0_A          210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKD---  285 (383)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCC---
T ss_pred             HHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCccc---
Confidence            4555553 4899999999999999999999998642211 11111111100000          0000000000000   


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .....+......+.+++.+||..+|.+|||+.+++.
T Consensus       286 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          286 WRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA  321 (383)
T ss_dssp             HHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            000001123456889999999999999999999883

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.23  E-value=7.3e-12  Score=85.72  Aligned_cols=89  Identities=8%  Similarity=-0.102  Sum_probs=62.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||++|||++|+.|+.......                ..+.... ...          ....
T Consensus       254 PE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~----------------~~~~~~~-~~~----------~~~~  306 (365)
T 3e7e_A          254 VEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE----------------CKPEGLF-RRL----------PHLD  306 (365)
T ss_dssp             HHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----------------EEECSCC-TTC----------SSHH
T ss_pred             hHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----------------eeechhc-ccc----------CcHH
Confidence            677778889999999999999999999999975322110                0011111 111          1234


Q ss_pred             HHHHHhhhccCCCccCC-CCHHHHHHHHHHhHHHHhh
Q 042057           81 SMVRIGVACSMESPQDR-MNITNVVHELQSVKNILLK  116 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~R-Ps~~~v~~~L~~~~~~~~~  116 (127)
                      .+..++..|++.+|.+| |++.++...|+........
T Consensus       307 ~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~~~  343 (365)
T 3e7e_A          307 MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYT  343 (365)
T ss_dssp             HHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHhhh
Confidence            56678888999999888 6788899999988887643

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.23  E-value=1.3e-12  Score=87.52  Aligned_cols=76  Identities=16%  Similarity=0.186  Sum_probs=51.9

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+....+ +.++||||||++++++++|+.||....       .....   .       .....            ...
T Consensus       207 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~-------~~~~~---~-------~~~~~------------~~~  257 (312)
T 2iwi_A          207 PEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ-------EILEA---E-------LHFPA------------HVS  257 (312)
T ss_dssp             HHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHHT---C-------CCCCT------------TSC
T ss_pred             ceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH-------HHhhh---c-------cCCcc------------cCC
Confidence            344444444 458999999999999999999985321       01100   0       00001            233


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++..||+.+|.+||++.+++.
T Consensus       258 ~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          258 PDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhc
Confidence            46788999999999999999999885

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.23  E-value=1.2e-11  Score=85.59  Aligned_cols=84  Identities=17%  Similarity=0.174  Sum_probs=54.2

Q ss_pred             CCcccC---CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLG---SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~---~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+..   ..++.++|||||||++|||++|+.||.......  ...........        ..  ..+        ..
T Consensus       183 PE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~--~~~~~~~~~~~--------~~--~~p--------~~  242 (384)
T 4fr4_A          183 PEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS--SKEIVHTFETT--------VV--TYP--------SA  242 (384)
T ss_dssp             GGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC--HHHHHHHHHHC--------CC--CCC--------TT
T ss_pred             CeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc--HHHHHHHHhhc--------cc--CCC--------Cc
Confidence            666653   458999999999999999999999986432111  11111111100        00  000        02


Q ss_pred             HHHHHHHHhhhccCCCccCCCC-HHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMN-ITNVV  104 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs-~~~v~  104 (127)
                      ....+..++..||+.+|.+||+ +.++.
T Consensus       243 ~s~~~~~li~~lL~~dP~~R~s~~~~l~  270 (384)
T 4fr4_A          243 WSQEMVSLLKKLLEPNPDQRFSQLSDVQ  270 (384)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred             CCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence            3456789999999999999998 55554

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.23  E-value=5e-12  Score=89.55  Aligned_cols=85  Identities=13%  Similarity=0.016  Sum_probs=55.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||+||++|++++|..||....     ..........+...    ....          .....+.
T Consensus       197 PE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~----~~~~----------~~~~~s~  256 (484)
T 3nyv_A          197 PEVLH-GTYDEKCDVWSTGVILYILLSGCPPFNGAN-----EYDILKKVEKGKYT----FELP----------QWKKVSE  256 (484)
T ss_dssp             HHHHH-TCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC----CCSG----------GGGGSCH
T ss_pred             ceeec-CCCCCcceeHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCC----CCCc----------ccccCCH
Confidence            45554 468999999999999999999999986421     11111111111000    0000          0012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+|||+.+++.
T Consensus       257 ~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          257 SAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHCCCChhHCcCHHHHhh
Confidence            6789999999999999999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.23  E-value=1.2e-12  Score=90.41  Aligned_cols=34  Identities=26%  Similarity=0.199  Sum_probs=29.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+ ..++.++||||+||+++||++|+.||..
T Consensus       199 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  233 (388)
T 3oz6_A          199 PEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG  233 (388)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             HHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence            565554 5789999999999999999999999864

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.23  E-value=1.5e-12  Score=88.05  Aligned_cols=81  Identities=17%  Similarity=0.064  Sum_probs=54.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+....++.++||||||+++|+|++|+.||....     ............      ..+..            ....
T Consensus       190 PE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~~~  246 (327)
T 3a62_A          190 PEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGEN-----RKKTIDKILKCK------LNLPP------------YLTQ  246 (327)
T ss_dssp             HHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHTC------CCCCT------------TSCH
T ss_pred             HhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCC------CCCCC------------CCCH
Confidence            566777788999999999999999999999986421     111111111110      00000            2335


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      .+.+++..||..+|.+||     ++.+++
T Consensus       247 ~~~~li~~~L~~dp~~R~~~~~~~~~e~l  275 (327)
T 3a62_A          247 EARDLLKKLLKRNAASRLGAGPGDAGEVQ  275 (327)
T ss_dssp             HHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred             HHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence            678899999999999999     555654

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.22  E-value=5.8e-13  Score=92.55  Aligned_cols=83  Identities=16%  Similarity=0.213  Sum_probs=53.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCC---CcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD---LNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.+..++.++||||+||+++||++|+.||.......   ......+....       ....+.  .        +..
T Consensus       222 PE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i-------~~~~~~--~--------p~~  284 (396)
T 4dc2_A          222 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-------LEKQIR--I--------PRS  284 (396)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH-------HHCCCC--C--------CTT
T ss_pred             chhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH-------hccccC--C--------CCc
Confidence            677788889999999999999999999999986432111   00111111000       000000  0        012


Q ss_pred             HHHHHHHHhhhccCCCccCCCCH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~  100 (127)
                      ....+.+++..||+.+|.+||++
T Consensus       285 ~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          285 LSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             SCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             CCHHHHHHHHHHhcCCHhHcCCC
Confidence            34567889999999999999996

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.22  E-value=4.6e-12  Score=90.02  Aligned_cols=85  Identities=13%  Similarity=0.045  Sum_probs=55.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||+||++|++++|..||....     ..........+.. ....+.             ....+.
T Consensus       207 PE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~-~~~~~~-------------~~~~s~  266 (494)
T 3lij_A          207 PEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT-----DQEILRKVEKGKY-TFDSPE-------------WKNVSE  266 (494)
T ss_dssp             HHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC-CCCSGG-------------GTTSCH
T ss_pred             HHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC-CCCchh-------------cccCCH
Confidence            45543 568999999999999999999999986422     1111111111100 000000             012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||+.+|.+|||+.+++.
T Consensus       267 ~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          267 GAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHCCCChhhCccHHHHhc
Confidence            6788999999999999999999884

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.22  E-value=3.2e-12  Score=88.67  Aligned_cols=34  Identities=21%  Similarity=0.269  Sum_probs=28.8

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||.+.+ ..++.++|||||||+++||++|+.||..
T Consensus       204 PE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  238 (405)
T 3rgf_A          204 PELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  238 (405)
T ss_dssp             HHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             chhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence            565655 4589999999999999999999999864

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.22  E-value=3.2e-12  Score=87.28  Aligned_cols=102  Identities=14%  Similarity=0.023  Sum_probs=57.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC-cc-----------ccccccccccCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD-HV-----------VYIVDPILLNDGK   67 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~   67 (127)
                      ||.+.+ ..++.++||||||++++++++|+.||.....  ......+...... ..           .......... .+
T Consensus       202 PE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  278 (362)
T 3pg1_A          202 PELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTF--YNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSN-VP  278 (362)
T ss_dssp             HHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCC-CC
T ss_pred             cHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhccc-CC
Confidence            455555 6789999999999999999999999864221  0011111000000 00           0000000000 00


Q ss_pred             CcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           68 GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        68 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..............+.+++..||+.+|.+|||+.+++.
T Consensus       279 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          279 ARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence            00001111123456789999999999999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.21  E-value=5.7e-12  Score=85.73  Aligned_cols=103  Identities=12%  Similarity=0.035  Sum_probs=56.4

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC---C-ccccccccccccCC----CCcch
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP---D-HVVYIVDPILLNDG----KGETR   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~----~~~~~   71 (127)
                      ||.+.+ ..++.++|||||||+++++++|+.|+.....  ......+.....   . .+...-........    .....
T Consensus       197 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  274 (351)
T 3mi9_A          197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTE--QHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK  274 (351)
T ss_dssp             HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCC
T ss_pred             chhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCCh--HHHHHHHHHHhCCCChhhccccccchhhcccccccccccC
Confidence            455544 4579999999999999999999999864221  111111111111   0 00000000000000    00000


Q ss_pred             hhh---HHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 INS---RLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~~---~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...   .......+.+++.+||+.+|.+|||+.+++.
T Consensus       275 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          275 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence            000   0001345789999999999999999998874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.21  E-value=4.9e-12  Score=84.09  Aligned_cols=81  Identities=14%  Similarity=0.153  Sum_probs=52.7

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...++.++||||||++++++++|+.|+....     ............. ....+.             .......+..+
T Consensus       203 ~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-----~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~l~~l  263 (298)
T 1phk_A          203 HPGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----QMLMLRMIMSGNY-QFGSPE-------------WDDYSDTVKDL  263 (298)
T ss_dssp             SCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC-CCCTTT-------------GGGSCHHHHHH
T ss_pred             cccCCcccccHhHHHHHHHHHHCCCCCcCcc-----HHHHHHHHhcCCc-ccCccc-------------ccccCHHHHHH
Confidence            4467889999999999999999999985321     1111111111100 000000             01334567899


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..||+.+|.+||++.+++.
T Consensus       264 i~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          264 VSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHCCSSGGGSCCHHHHTT
T ss_pred             HHHHccCCcccCCCHHHHHh
Confidence            99999999999999998874

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.21  E-value=5.3e-13  Score=92.06  Aligned_cols=79  Identities=15%  Similarity=0.027  Sum_probs=53.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|+|||||+++||++|..||....     .............      ....            ....
T Consensus       208 PE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~~~------~~~~------------~~~~  264 (373)
T 2r5t_A          208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----TAEMYDNILNKPL------QLKP------------NITN  264 (373)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB-----HHHHHHHHHHSCC------CCCS------------SSCH
T ss_pred             HHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhccc------CCCC------------CCCH
Confidence            567777889999999999999999999999986322     1111111111100      0000            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITN  102 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~  102 (127)
                      .+..++..||+.+|.+||++.+
T Consensus       265 ~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          265 SARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHHHHTCSSGGGSTTTTT
T ss_pred             HHHHHHHHHcccCHHhCCCCCC
Confidence            6788999999999999999853

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.20  E-value=6.8e-12  Score=86.25  Aligned_cols=102  Identities=12%  Similarity=0.024  Sum_probs=57.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccc----cccc-------cccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVV----YIVD-------PILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~   68 (127)
                      ||.+.+ ..++.++||||+||+++||++|+.||.....  ......+.........    .+..       ..+... +.
T Consensus       198 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~-~~  274 (367)
T 2fst_X          198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH--IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM-PK  274 (367)
T ss_dssp             HHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCC-CC
T ss_pred             hHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCC-CC
Confidence            555555 6789999999999999999999999864221  1111111111110000    0000       000000 00


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .............+.+++.+||..+|.+|||+.+++.
T Consensus       275 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          275 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  311 (367)
T ss_dssp             CCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence            0000000122456789999999999999999998874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.20  E-value=1.9e-12  Score=88.57  Aligned_cols=81  Identities=14%  Similarity=0.118  Sum_probs=55.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||+++||++|+.||....     ..........+..      ....            ....
T Consensus       207 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----~~~~~~~i~~~~~------~~p~------------~~~~  263 (350)
T 1rdq_E          207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIVSGKV------RFPS------------HFSS  263 (350)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC------CCCT------------TCCH
T ss_pred             HHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC-----HHHHHHHHHcCCC------CCCC------------CCCH
Confidence            577777889999999999999999999999986321     1111111111100      0000            2345


Q ss_pred             HHHHHhhhccCCCccCCCC-----HHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-----ITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-----~~~v~  104 (127)
                      .+..++.+||+.+|.+||+     +.++.
T Consensus       264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~  292 (350)
T 1rdq_E          264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIK  292 (350)
T ss_dssp             HHHHHHHHHSCSCTTTCTTSSTTTTHHHH
T ss_pred             HHHHHHHHHhhcCHHhccCCccCCHHHHH
Confidence            6788999999999999998     66654

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.20  E-value=5.2e-12  Score=86.77  Aligned_cols=103  Identities=13%  Similarity=-0.011  Sum_probs=57.4

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC-C-ccccccc--------cccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP-D-HVVYIVD--------PILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~--------~~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||++++++++|+.||...... ..+......... . .....+.        ..+.... ..
T Consensus       210 PE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  287 (371)
T 4exu_A          210 PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTP-RK  287 (371)
T ss_dssp             HHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCC-CC
T ss_pred             HHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCc-ch
Confidence            455555 67899999999999999999999998642210 001111110000 0 0000000        0000000 00


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++..||+.+|.+|||+.+++.
T Consensus       288 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          288 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  323 (371)
T ss_dssp             CHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence            000011123567889999999999999999998874

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.19  E-value=9e-12  Score=91.38  Aligned_cols=80  Identities=16%  Similarity=0.127  Sum_probs=53.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.. ..|+.++|+||+||++|||++|..||.......  ............      ...    +        ...+
T Consensus       359 PEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i~~~~------~~~----p--------~~~S  418 (689)
T 3v5w_A          359 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMA------VEL----P--------DSFS  418 (689)
T ss_dssp             HHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHHHHCC------CCC----C--------TTSC
T ss_pred             HHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhhcCCC------CCC----C--------ccCC
Confidence            677765 479999999999999999999999996432211  112111111110      000    0        1234


Q ss_pred             HHHHHHhhhccCCCccCCCCH
Q 042057           80 NSMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~  100 (127)
                      ..+.+++..|+..+|.+|++.
T Consensus       419 ~~a~dLI~~lL~~dP~~Rl~~  439 (689)
T 3v5w_A          419 PELRSLLEGLLQRDVNRRLGC  439 (689)
T ss_dssp             HHHHHHHHHHTCSCGGGCTTC
T ss_pred             HHHHHHHHHHccCCHhHCCCC
Confidence            567889999999999999983

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.19  E-value=2.5e-12  Score=86.84  Aligned_cols=81  Identities=15%  Similarity=0.037  Sum_probs=55.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|+||+||+++||++|+.||....     ............      .....            ....
T Consensus       172 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~~~  228 (318)
T 1fot_A          172 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----TMKTYEKILNAE------LRFPP------------FFNE  228 (318)
T ss_dssp             HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHCC------CCCCT------------TSCH
T ss_pred             HhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC------CCCCC------------CCCH
Confidence            567777889999999999999999999999986321     111111111110      00000            2334


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      .+.+++.+|+..+|.+||     ++.+++
T Consensus       229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~  257 (318)
T 1fot_A          229 DVKDLLSRLITRDLSQRLGNLQNGTEDVK  257 (318)
T ss_dssp             HHHHHHHHHTCSCTTTCTTSSTTTTHHHH
T ss_pred             HHHHHHHHHhccCHHHcCCCcCCCHHHHh
Confidence            678899999999999999     777776

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.19  E-value=4.8e-12  Score=84.68  Aligned_cols=101  Identities=16%  Similarity=0.099  Sum_probs=56.4

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc-----------cccccccccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH-----------VVYIVDPILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~   68 (127)
                      ||.+.. +.++.++||||||++++|+++|+.||.....  ......+....+..           ....+......... 
T Consensus       193 PE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  269 (320)
T 2i6l_A          193 PRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHE--LEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHK-  269 (320)
T ss_dssp             HHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCC-
T ss_pred             cHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCC-
Confidence            344433 5688999999999999999999999864321  11111111111000           00000000000000 


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ............+.+++.+||+.+|.+||++.+++.
T Consensus       270 -~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          270 -PLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             -CHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             -ChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence             000001123567889999999999999999999874

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.19  E-value=1e-11  Score=84.89  Aligned_cols=86  Identities=21%  Similarity=0.237  Sum_probs=53.7

Q ss_pred             CCcccC--CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLG--SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~--~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||++.+  ..++.++|||||||++||+++|+.||...... .............      .+....            ..
T Consensus       229 PE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~------~~~~~~------------~~  289 (355)
T 1vzo_A          229 PDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK-NSQAEISRRILKS------EPPYPQ------------EM  289 (355)
T ss_dssp             HHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSC-CCHHHHHHHHHHC------CCCCCT------------TS
T ss_pred             hhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCcc-chHHHHHHHHhcc------CCCCCc------------cc
Confidence            455554  34788999999999999999999998643211 1122222111111      000101            23


Q ss_pred             HHHHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      ...+..++.+||..+|.+||     ++.+++.
T Consensus       290 ~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~  321 (355)
T 1vzo_A          290 SALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  321 (355)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             CHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHc
Confidence            34678899999999999999     8887764

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.18  E-value=2.5e-11  Score=82.70  Aligned_cols=103  Identities=14%  Similarity=0.032  Sum_probs=56.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhc-CC-ccccccc--------cccccCCCCc
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMAL-PD-HVVYIVD--------PILLNDGKGE   69 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~--------~~~~~~~~~~   69 (127)
                      ||.+.+ ..++.++||||||++++++++|+.||...... ..+........ +. .....+.        ..+..... .
T Consensus       192 PE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  269 (353)
T 3coi_A          192 PEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR-K  269 (353)
T ss_dssp             HHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHH-HHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSS-C
T ss_pred             HHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCC-c
Confidence            455555 57899999999999999999999998643210 00111111000 00 0000000        00000000 0


Q ss_pred             chhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           70 TRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        70 ~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ............+.+++.+|+..+|.+||++.+++.
T Consensus       270 ~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          270 DFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT  305 (353)
T ss_dssp             CTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             cHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            000011133567889999999999999999998874

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.18  E-value=8.4e-12  Score=85.46  Aligned_cols=102  Identities=15%  Similarity=0.057  Sum_probs=56.2

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcccccccc-----------ccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDP-----------ILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~   68 (127)
                      ||.+.. ..++.++||||+|++++++++|+.||.....  ......+...........+..           .+..... 
T Consensus       200 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  276 (364)
T 3qyz_A          200 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY--LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNK-  276 (364)
T ss_dssp             HHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSG--GGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCC-
T ss_pred             CHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCCh--HHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccC-
Confidence            454433 4489999999999999999999999864321  111111111111000000000           0000000 


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .............+.+++.+||..+|.+|||+.+++.
T Consensus       277 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          277 VPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             CCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             CCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            0000000123456789999999999999999999874

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=5.5e-12  Score=85.81  Aligned_cols=104  Identities=13%  Similarity=0.037  Sum_probs=56.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC---Cccccc---cccccccCCCCcchhh
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP---DHVVYI---VDPILLNDGKGETRIN   73 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~   73 (127)
                      ||.+.+ ..++.++||||||++++|+++|..|+..... ...+.........   ..+...   .+.......+......
T Consensus       181 PE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (346)
T 1ua2_A          181 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSD-LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHH  259 (346)
T ss_dssp             HHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHH
T ss_pred             chHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHH
Confidence            455544 3478899999999999999999988753211 1111111111100   011110   0000000000000000


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+.+++..||..+|.+|||+.+++.
T Consensus       260 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          260 IFSAAGDDLLDLIQGLFLFNPCARITATQALK  291 (346)
T ss_dssp             HCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             hhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence            00123467889999999999999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.18  E-value=1.6e-11  Score=84.33  Aligned_cols=102  Identities=14%  Similarity=-0.003  Sum_probs=57.3

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc---ccccccc--------ccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH---VVYIVDP--------ILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~~   68 (127)
                      ||.+.+ ..++.++||||+||+++||++|+.||.....  ......+.......   ....+..        .+.... .
T Consensus       194 PE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~  270 (367)
T 1cm8_A          194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH--LDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELE-K  270 (367)
T ss_dssp             THHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCC-C
T ss_pred             HHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCC-C
Confidence            566655 6789999999999999999999999864221  00111110000000   0000000        000000 0


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .............+.+++.+|+..+|.+|||+.+++.
T Consensus       271 ~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          271 KDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  307 (367)
T ss_dssp             CCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence            0000001123456789999999999999999999875

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.18  E-value=5.3e-12  Score=92.66  Aligned_cols=99  Identities=13%  Similarity=-0.047  Sum_probs=55.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc-----cccccccccccCCCCcchhhhH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH-----VVYIVDPILLNDGKGETRINSR   75 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~   75 (127)
                      ||.+.++.++.++||||||++++++++|..||....    ....|........     ......................
T Consensus       192 PE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~----~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~  267 (676)
T 3qa8_A          192 PELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW----QPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLS  267 (676)
T ss_dssp             SCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC----HHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCC
T ss_pred             hHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc----chhhhhhhhhcccchhhhhhhhhccccccccccCCchhhc
Confidence            788888899999999999999999999999985321    1111111000000     0000000000000000000111


Q ss_pred             HHHHHHHHHHhhhccCCCccCCCCHHHH
Q 042057           76 LACVNSMVRIGVACSMESPQDRMNITNV  103 (127)
Q Consensus        76 ~~~~~~~~~l~~~c~~~~p~~RPs~~~v  103 (127)
                      ......+..++..||..+|.+|||+.++
T Consensus       268 ~~ls~~L~dLI~~mL~~DP~kRPTa~el  295 (676)
T 3qa8_A          268 GILAGKLERWLQCMLMWHQRQRGTDPQN  295 (676)
T ss_dssp             GGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred             hhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence            2356778999999999999999999774

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.18  E-value=7e-12  Score=89.31  Aligned_cols=85  Identities=11%  Similarity=0.022  Sum_probs=55.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++||||+||+++++++|..||....     ..........+...  ..            .......+.
T Consensus       217 PE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~-----~~~~~~~i~~~~~~--~~------------~~~~~~~s~  276 (504)
T 3q5i_A          217 PEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQN-----DQDIIKKVEKGKYY--FD------------FNDWKNISD  276 (504)
T ss_dssp             HHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCCC--CC------------HHHHTTSCH
T ss_pred             HHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHcCCCC--CC------------ccccCCCCH
Confidence            45544 568999999999999999999999986421     11111111111000  00            000012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++..||..+|.+|||+.+++.
T Consensus       277 ~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          277 EAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCCCHHHHhc
Confidence            6789999999999999999999873

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.18  E-value=2.7e-12  Score=87.26  Aligned_cols=102  Identities=13%  Similarity=-0.014  Sum_probs=56.4

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cccccc-cc-------ccccCCC
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVYIV-DP-------ILLNDGK   67 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~-------~~~~~~~   67 (127)
                      ||.+. .+.++.++||||||++++++++|+.||......  .....+......    .....+ ..       .+.. .+
T Consensus       191 PE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  267 (353)
T 2b9h_A          191 PEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR--HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPM-YP  267 (353)
T ss_dssp             HHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH--HHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCC-CC
T ss_pred             CeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcH--HHHHHHHHHhCCCchhccccccccchhhHHhhcccC-CC
Confidence            45443 367889999999999999999999998643210  001111110000    000000 00       0000 00


Q ss_pred             CcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           68 GETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        68 ~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..............+.+++.+||+.+|.+|||+.+++.
T Consensus       268 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          268 AAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             CCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            00000011133456789999999999999999999875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.16  E-value=1.2e-12  Score=89.59  Aligned_cols=77  Identities=17%  Similarity=0.072  Sum_probs=51.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||+++||++|+.||....     ...........        ...  .+        .....
T Consensus       193 PE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~-----~~~~~~~i~~~--------~~~--~p--------~~~~~  249 (353)
T 3txo_A          193 PEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN-----EDDLFEAILND--------EVV--YP--------TWLHE  249 (353)
T ss_dssp             HHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHC--------CCC--CC--------TTSCH
T ss_pred             hhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC-----HHHHHHHHHcC--------CCC--CC--------CCCCH
Confidence            455666678999999999999999999999986422     11111111111        000  00        02234


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++..|+..+|.+||++
T Consensus       250 ~~~~li~~lL~~dP~~R~~~  269 (353)
T 3txo_A          250 DATGILKSFMTKNPTMRLGS  269 (353)
T ss_dssp             HHHHHHHHHTCSSGGGSTTS
T ss_pred             HHHHHHHHHhhhCHHHccCC
Confidence            57889999999999999998

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.16  E-value=3.7e-12  Score=86.91  Aligned_cols=83  Identities=16%  Similarity=0.192  Sum_probs=52.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC---cHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL---NLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||.+.+..++.++||||+||+++||++|+.||........   .....+.....       .....  .+        ..
T Consensus       179 PE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~-------~~~~~--~p--------~~  241 (345)
T 3a8x_A          179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL-------EKQIR--IP--------RS  241 (345)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHH-------HCCCC--CC--------TT
T ss_pred             ccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHH-------cCCCC--CC--------CC
Confidence            5677777899999999999999999999999864221110   00111110000       00000  00        02


Q ss_pred             HHHHHHHHhhhccCCCccCCCCH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~  100 (127)
                      ....+.+++.+||..+|.+||++
T Consensus       242 ~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          242 LSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             CCHHHHHHHHHHhcCCHhHCCCC
Confidence            34567889999999999999996

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.16  E-value=3.3e-12  Score=87.48  Aligned_cols=77  Identities=17%  Similarity=0.161  Sum_probs=52.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|+|||||+++||++|+.||....  ...+...+   ....      .....            ....
T Consensus       190 PE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~--~~~~~~~i---~~~~------~~~p~------------~~s~  246 (353)
T 2i0e_A          190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED--EDELFQSI---MEHN------VAYPK------------SMSK  246 (353)
T ss_dssp             HHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHH---HHCC------CCCCT------------TSCH
T ss_pred             hhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC--HHHHHHHH---HhCC------CCCCC------------CCCH
Confidence            577777889999999999999999999999986321  11111111   1110      00000            2345


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+..++..||..+|.+||+.
T Consensus       247 ~~~~li~~lL~~dP~~R~~~  266 (353)
T 2i0e_A          247 EAVAICKGLMTKHPGKRLGC  266 (353)
T ss_dssp             HHHHHHHHHTCSCTTSCTTC
T ss_pred             HHHHHHHHHhhcCHHHcCCC
Confidence            67889999999999999964

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.14  E-value=5.7e-12  Score=92.72  Aligned_cols=77  Identities=16%  Similarity=0.134  Sum_probs=54.2

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++|||||||++|||++|+.||....     ............        +.  .+        .....
T Consensus       511 PE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~--------~~--~p--------~~~s~  567 (674)
T 3pfq_A          511 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED-----EDELFQSIMEHN--------VA--YP--------KSMSK  567 (674)
T ss_dssp             HHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHSSC--------CC--CC--------TTSCH
T ss_pred             HhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC-----HHHHHHHHHhCC--------CC--CC--------ccCCH
Confidence            677788889999999999999999999999986421     111111111110        00  00        13345


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+.+++..||..+|.+||++
T Consensus       568 ~~~~li~~lL~~dP~~R~~~  587 (674)
T 3pfq_A          568 EAVAICKGLMTKHPGKRLGC  587 (674)
T ss_dssp             HHHHHHHHHSCSSSTTCTTC
T ss_pred             HHHHHHHHHccCCHHHCCCC
Confidence            67889999999999999997

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.13  E-value=3.1e-11  Score=84.52  Aligned_cols=28  Identities=11%  Similarity=0.171  Sum_probs=24.5

Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ....+.+++.+||..+|.+|||+.+++.
T Consensus       334 ~s~~~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          334 ISDDGINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            3456789999999999999999999874

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.13  E-value=1.5e-12  Score=88.96  Aligned_cols=81  Identities=22%  Similarity=0.280  Sum_probs=55.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|+||+||+++||++|+.||....  ...+...+.   ...      +....            ....
T Consensus       187 PE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~---~~~------~~~p~------------~~s~  243 (345)
T 1xjd_A          187 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIR---MDN------PFYPR------------WLEK  243 (345)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HCC------CCCCT------------TSCH
T ss_pred             hhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHH---hCC------CCCCc------------ccCH
Confidence            567777889999999999999999999999986321  111111111   110      00100            2234


Q ss_pred             HHHHHhhhccCCCccCCCCHH-HHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT-NVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~-~v~  104 (127)
                      .+.+++.+||..+|.+||++. ++.
T Consensus       244 ~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          244 EAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHHhcCCHhHcCCChHHHH
Confidence            678899999999999999986 553

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.12  E-value=1.6e-11  Score=81.54  Aligned_cols=84  Identities=17%  Similarity=0.093  Sum_probs=50.9

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+ +.++.++||||||++++++++   |+....    ............      ........+        ....
T Consensus       199 PE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~----~~~~~~~~~~~~------~~~~~~~~~--------~~~~  257 (303)
T 1zy4_A          199 TEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGM----ERVNILKKLRSV------SIEFPPDFD--------DNKM  257 (303)
T ss_dssp             HHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHH----HHHHHHHHHHST------TCCCCTTCC--------TTTS
T ss_pred             cccccCCCCCcchhhHHHHHHHHHHHHh---ccCCch----hHHHHHHhcccc------ccccCcccc--------ccch
Confidence            454443 468999999999999999998   432110    011111111110      000111111        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+..++..||+.+|.+|||+.+++.
T Consensus       258 ~~~~~li~~~l~~dp~~Rps~~~ll~  283 (303)
T 1zy4_A          258 KVEKKIIRLLIDHDPNKRPGARTLLN  283 (303)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHhcCcccCcCHHHHhC
Confidence            56788999999999999999999885

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.11  E-value=1e-11  Score=89.44  Aligned_cols=81  Identities=17%  Similarity=0.175  Sum_probs=54.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++|||++|+.||...... .............        ..  ..+        .....
T Consensus       358 PE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~~~--------~~--~~p--------~~~s~  418 (543)
T 3c4z_A          358 PELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQ--------AV--TYP--------DKFSP  418 (543)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHHHC--------CC--CCC--------TTSCH
T ss_pred             hhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHhhc--------cc--CCC--------cccCH
Confidence            67777788999999999999999999999998643211 1111111111111        00  000        13345


Q ss_pred             HHHHHhhhccCCCccCCCCH
Q 042057           81 SMVRIGVACSMESPQDRMNI  100 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~  100 (127)
                      .+..++..||..+|.+||++
T Consensus       419 ~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          419 ASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHHHHHSCSSGGGSCCC
T ss_pred             HHHHHHHHhccCCHhHCCCC
Confidence            67889999999999999976

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.09  E-value=1.2e-10  Score=81.94  Aligned_cols=27  Identities=11%  Similarity=0.209  Sum_probs=24.1

Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ...+.+++.+||..+|.+|||+.+++.
T Consensus       370 s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          370 SADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             CHHHHHHHHHHhccCccccCCHHHHhc
Confidence            456789999999999999999998875

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.08  E-value=4.3e-11  Score=86.64  Aligned_cols=85  Identities=14%  Similarity=0.092  Sum_probs=55.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||+++||++|+.||....... ............      ......            ....
T Consensus       354 PEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~-~~~~i~~~i~~~------~~~~p~------------~~s~  414 (576)
T 2acx_A          354 PEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI-KREEVERLVKEV------PEEYSE------------RFSP  414 (576)
T ss_dssp             HHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCC-CHHHHHHHHHHC------CCCCCT------------TSCH
T ss_pred             HHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccch-hHHHHHHHhhcc------cccCCc------------cCCH
Confidence            677777789999999999999999999999986432111 111111100000      000000            2345


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~  104 (127)
                      .+.+++.+||..+|.+||     ++.+++
T Consensus       415 ~~~dLI~~lL~~dP~~R~g~~~~sa~eil  443 (576)
T 2acx_A          415 QARSLCSQLLCKDPAERLGCRGGSAREVK  443 (576)
T ss_dssp             HHHHHHHHHTCSSGGGSTTCSSSHHHHHH
T ss_pred             HHHHHHHHhccCCHHHcCCCCCCCHHHHH
Confidence            678899999999999999     566665

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.02  E-value=2.1e-10  Score=84.45  Aligned_cols=84  Identities=18%  Similarity=0.183  Sum_probs=57.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++ .+.++|||||||+++++++|..|+.....              ..        +....       .......
T Consensus       246 PE~~~~~-~~~~sDi~slG~~l~~l~~g~~~~~~~~~--------------~~--------~~~~~-------~~~~~~~  295 (681)
T 2pzi_A          246 PEIVRTG-PTVATDIYTVGRTLAALTLDLPTRNGRYV--------------DG--------LPEDD-------PVLKTYD  295 (681)
T ss_dssp             TTHHHHC-SCHHHHHHHHHHHHHHHHSCCCEETTEEC--------------SS--------CCTTC-------HHHHHCH
T ss_pred             HHHHcCC-CCCceehhhhHHHHHHHHhCCCCCccccc--------------cc--------ccccc-------cccccCH
Confidence            6666544 48899999999999999999877542110              00        00000       0113345


Q ss_pred             HHHHHhhhccCCCccCCCC-HHHHHHHHHHhHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-ITNVVHELQSVKNIL  114 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-~~~v~~~L~~~~~~~  114 (127)
                      .+..++.+||+.+|.+||+ +.++...|..+....
T Consensus       296 ~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~~  330 (681)
T 2pzi_A          296 SYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLREV  330 (681)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHHh
Confidence            7889999999999999996 666777777766544

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.00  E-value=8.7e-11  Score=81.97  Aligned_cols=86  Identities=15%  Similarity=0.081  Sum_probs=52.9

Q ss_pred             CCcccCCC----CCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHH
Q 042057            1 VEYGLGSG----VSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRL   76 (127)
Q Consensus         1 pE~~~~~~----~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (127)
                      ||++....    ++.++|||||||+++||++|+.||....     ............. .   ......          .
T Consensus       238 PE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~-~---~~~p~~----------~  298 (410)
T 3v8s_A          238 PEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS-----LVGTYSKIMNHKN-S---LTFPDD----------N  298 (410)
T ss_dssp             HHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTHHH-H---CCCCTT----------C
T ss_pred             HHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC-----hhhHHHHHHhccc-c---ccCCCc----------c
Confidence            45554433    7899999999999999999999986321     1111111111000 0   000000          0


Q ss_pred             HHHHHHHHHhhhccCCCccC--CCCHHHHHH
Q 042057           77 ACVNSMVRIGVACSMESPQD--RMNITNVVH  105 (127)
Q Consensus        77 ~~~~~~~~l~~~c~~~~p~~--RPs~~~v~~  105 (127)
                      .....+.+++.+|+..+|.+  ||++.+++.
T Consensus       299 ~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          299 DISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             cccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            22346678889999988888  999998764

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=98.96  E-value=3.7e-11  Score=83.86  Aligned_cols=80  Identities=10%  Similarity=0.023  Sum_probs=48.6

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      .+.++.++|||||||+++||++|+.||.....     ........... ....-+..            +......+.++
T Consensus       244 ~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~~~-~~~~~p~~------------~~~~s~~~~dl  305 (412)
T 2vd5_A          244 TGSYGPECDWWALGVFAYEMFYGQTPFYADST-----AETYGKIVHYK-EHLSLPLV------------DEGVPEEARDF  305 (412)
T ss_dssp             CSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH-----HHHHHHHHTHH-HHCCCC----------------CCCHHHHHH
T ss_pred             CCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH-----HHHHHHHHhcc-cCcCCCcc------------ccCCCHHHHHH
Confidence            35689999999999999999999999864221     11111111000 00000000            01234567889


Q ss_pred             hhhccCCCccCC---CCHHHHH
Q 042057           86 GVACSMESPQDR---MNITNVV  104 (127)
Q Consensus        86 ~~~c~~~~p~~R---Ps~~~v~  104 (127)
                      +.+||. +|.+|   |++.++.
T Consensus       306 i~~lL~-~p~~Rlgr~~~~ei~  326 (412)
T 2vd5_A          306 IQRLLC-PPETRLGRGGAGDFR  326 (412)
T ss_dssp             HHTTSS-CGGGCTTTTTHHHHH
T ss_pred             HHHHcC-ChhhcCCCCCHHHHh
Confidence            999998 89888   5777765

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=98.96  E-value=4.2e-11  Score=84.20  Aligned_cols=82  Identities=11%  Similarity=0.037  Sum_probs=49.4

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      .+.++.++|||||||+++||++|+.||....     ............ ....-+....            .....+.++
T Consensus       255 ~~~~~~~~DvwSlGvil~elltG~~Pf~~~~-----~~~~~~~i~~~~-~~~~~p~~~~------------~~s~~~~dL  316 (437)
T 4aw2_A          255 KGRYGPECDWWSLGVCMYEMLYGETPFYAES-----LVETYGKIMNHK-ERFQFPTQVT------------DVSENAKDL  316 (437)
T ss_dssp             CCEECTHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTHH-HHCCCCSSCC------------CSCHHHHHH
T ss_pred             CCCCCCcCeeHHHHHHHHHHHhCCCCCCCCC-----hhHHHHhhhhcc-ccccCCcccc------------cCCHHHHHH
Confidence            4568999999999999999999999986321     111111111100 0000000000            123456778


Q ss_pred             hhhccCCCccC--CCCHHHHHH
Q 042057           86 GVACSMESPQD--RMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~--RPs~~~v~~  105 (127)
                      +.+|+..+|.+  ||++.+++.
T Consensus       317 i~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          317 IRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHTTSSCGGGCTTTTTTHHHHT
T ss_pred             HHHHhcccccccCCCCHHHHhC
Confidence            88888777776  999988763

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=97.10  E-value=0.00026  Score=47.65  Aligned_cols=83  Identities=12%  Similarity=0.019  Sum_probs=46.9

Q ss_pred             CCcccCCCCCCcccchhhhHH-HHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGIL-LLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~-l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+.. +.++||||++++ ..++++|..|+....    ...............   ...        ..........
T Consensus       246 PE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~~---~~~--------~~~~~~~~~s  309 (336)
T 2vuw_A          246 EDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL----WLHYLTDKMLKQMTF---KTK--------CNTPAMKQIK  309 (336)
T ss_dssp             SGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH----HHHHHHHHHHHTCCC---SSC--------CCSHHHHHHH
T ss_pred             hhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh----hhhHHHHhhhhhhcc---Ccc--------cchhhhhhcC
Confidence            67776555 889999998777 667788888864210    000001110100000   000        0011233567


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ..+.+++.+||..+     |+.+++
T Consensus       310 ~~~~dli~~~L~~d-----sa~e~l  329 (336)
T 2vuw_A          310 RKIQEFHRTMLNFS-----SATDLL  329 (336)
T ss_dssp             HHHHHHHHHGGGSS-----SHHHHH
T ss_pred             HHHHHHHHHHhccC-----CHHHHH
Confidence            78999999999965     777765

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	127
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	4e-07
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	1e-06
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	1e-05
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-05
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-05
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	3e-05
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	9e-05
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-04
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-04
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	6e-04
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	0.001
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	0.001
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	0.002
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	0.002
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	0.003
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	0.004

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.2 bits (106), Expect = 4e-07
 Identities = 20/119 (16%), Positives = 43/119 (36%), Gaps = 21/119 (17%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E       +T  DV+S+G+LL E+ T   P             +  +   D  VY++   
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPP------------YPDVNTFDITVYLLQGR 251

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENV 120
            L   +          C + +  + + C     + R + + +V  + ++ +  +    V
Sbjct: 252 RLLQPEY---------CPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYV 301

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 20/111 (18%), Positives = 45/111 (40%), Gaps = 17/111 (15%)

Query: 1   VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDP 60
           +     +  S   DVY++GI+L E+ T + P             ++ +   D ++++V  
Sbjct: 178 IRMQDKNPYSFQSDVYAFGIVLYELMTGQLP-------------YSNINNRDQIIFMVGR 224

Query: 61  ILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVK 111
             L+    + R N    C  +M R+   C  +   +R     ++  ++ + 
Sbjct: 225 GYLSPDLSKVRSN----CPKAMKRLMAECLKKKRDERPLFPQILASIELLA 271

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.6 bits (94), Expect = 1e-05
 Identities = 19/125 (15%), Positives = 45/125 (36%), Gaps = 25/125 (20%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E       ++  DV+S+GI++ E+ T  +        +L+ H   +              
Sbjct: 183 EAISYRKFTSASDVWSFGIVMWEVMTYGER----PYWELSNHEVMKAINDGF-------- 230

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVL 121
                    R+ + + C +++ ++ + C  +    R    ++V  L      L++  + L
Sbjct: 231 ---------RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDK----LIRAPDSL 277

Query: 122 NKQMD 126
               D
Sbjct: 278 KTLAD 282

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (93), Expect = 2e-05
 Identities = 13/110 (11%), Positives = 28/110 (25%), Gaps = 1/110 (0%)

Query: 3   YGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPIL 62
                      D+Y+ G++  E+        +  +  L  +           +  V    
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 248

Query: 63  LNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKN 112
                   R  S    +  M +I   C   +   R+    +   L  +  
Sbjct: 249 KLRPNIPNRWQS-CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (93), Expect = 2e-05
 Identities = 18/119 (15%), Positives = 44/119 (36%), Gaps = 25/119 (21%)

Query: 3   YGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPIL 62
                  ++  DV+SYGI++ E+ +  +              +  M   D +  I     
Sbjct: 204 AIQYRKFTSASDVWSYGIVMWEVMSYGERP------------YWDMTNQDVINAIEQ--- 248

Query: 63  LNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVL 121
                 + R+   + C +++ ++ + C  +    R     +V+ L      ++++ N L
Sbjct: 249 ------DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK----MIRNPNSL 297

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.6 bits (92), Expect = 3e-05
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 25/117 (21%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E       ST  DV+S+GILL E+ +  +         + L          + +   D  
Sbjct: 170 EALREKKFSTKSDVWSFGILLWEIYSFGRV----PYPRIPLKDVVPRVEKGYKMDAPD-- 223

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHE 118
                           C  ++  +   C       R +   +  +L+ +K     HE
Sbjct: 224 ---------------GCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT----HE 261

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (88), Expect = 9e-05
 Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 21/109 (19%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E    S  S+  DV+S+G+L+ E+ +  K           +   +          +  P 
Sbjct: 172 EVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG------FRLYKPR 225

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
           L                   + +I   C  E P+DR   + ++ +L  +
Sbjct: 226 L---------------ASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 259

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 2e-04
 Identities = 23/109 (21%), Positives = 35/109 (32%), Gaps = 27/109 (24%)

Query: 3   YGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD---LNLHRFARMALPDHVVYIVD 59
                  +   DV+S+GILL E+ T  +             NL R  RM  PD+      
Sbjct: 181 AINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDN------ 234

Query: 60  PILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQ 108
                             C   + ++   C  E P+DR     +   L+
Sbjct: 235 ------------------CPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 21/107 (19%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E    +  +T  DV++YG++L E+ +                 +  MA  + + Y+ D  
Sbjct: 212 ESIFYNRYTTESDVWAYGVVLWEIFSYGLQ------------PYYGMAHEEVIYYVRDGN 259

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQ 108
           +L   +          C   +  +   C  + P DR +  ++   LQ
Sbjct: 260 ILACPEN---------CPLELYNLMRLCWSKLPADRPSFCSIHRILQ 297

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 6e-04
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 24/124 (19%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E    S  +TN DV+SYG+LL E+ +            +            +        
Sbjct: 196 ESLNYSVYTTNSDVWSYGVLLWEIVSLGGT----PYCGMTCAELYEKLPQGY-------- 243

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKHENVL 121
                    R+   L C + +  +   C  E P +R +   ++  L     +L + +  +
Sbjct: 244 ---------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLN---RMLEERKTYV 291

Query: 122 NKQM 125
           N  +
Sbjct: 292 NTTL 295

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 10/55 (18%), Positives = 18/55 (32%), Gaps = 2/55 (3%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL--NLHRFARMALPDHV 54
           E       +   D++S G LL E+     P     + +L   +       +P   
Sbjct: 184 EQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY 238

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.001
 Identities = 20/107 (18%), Positives = 36/107 (33%), Gaps = 21/107 (19%)

Query: 3   YGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPIL 62
             L    +   DV+S+GILL E+ T  +     + G +N        + D V        
Sbjct: 185 AALYGRFTIKSDVWSFGILLTELTTKGRV---PYPGMVN------REVLDQVERGYRMPC 235

Query: 63  LNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQS 109
             +            C  S+  +   C  + P++R     +   L+ 
Sbjct: 236 PPE------------CPESLHDLMCQCWRKEPEERPTFEYLQAFLED 270

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (79), Expect = 0.002
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKP 31
           E   G+  S   D++S G+ L+EM   + P
Sbjct: 173 ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 17/108 (15%), Positives = 37/108 (34%), Gaps = 21/108 (19%)

Query: 3   YGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPIL 62
               +  S   DV+++G+LL E+ T            ++L +   +   D+         
Sbjct: 187 SLAYNKFSIKSDVWAFGVLLWEIATYGMS----PYPGIDLSQVYELLEKDY--------- 233

Query: 63  LNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
                   R+     C   +  +  AC   +P DR +   +    +++
Sbjct: 234 --------RMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 273

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 0.003
 Identities = 17/109 (15%), Positives = 37/109 (33%), Gaps = 21/109 (19%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E  + S  S+  D++++G+L+ E+ +  K     +E   N      +      + +  P 
Sbjct: 171 EVLMYSKFSSKSDIWAFGVLMWEIYSLGKMP---YERFTNSETAEHI---AQGLRLYRPH 224

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
           L                   +  I  +C  E   +R     ++  +  V
Sbjct: 225 L---------------ASEKVYTIMYSCWHEKADERPTFKILLSNILDV 258

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (76), Expect = 0.004
 Identities = 20/109 (18%), Positives = 34/109 (31%), Gaps = 21/109 (19%)

Query: 2   EYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPI 61
           E       +   DV+S+G+LL E+ T        + G      F  +             
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFTLGGS---PYPGVPVEELFKLL------------- 250

Query: 62  LLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVHELQSV 110
                K   R++    C N +  +   C    P  R     +V +L  +
Sbjct: 251 -----KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	127
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	99.77
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	99.76
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	99.75
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.75
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	99.75
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	99.75
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	99.74
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.73
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.72
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	99.72
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	99.72
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	99.72
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	99.72
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.71
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	99.71
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.71
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	99.7
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	99.7
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.69
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.69
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	99.69
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	99.66
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.64
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	99.63
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	99.6
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	99.6
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.6
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.59
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	99.57
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	99.57
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	99.56
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	99.56
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.56
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.55
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	99.53
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.51
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.5
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.5
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	99.49
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.49
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.46
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.45
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.43
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.42
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.42
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.39
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	99.38
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.37
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.37
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.37
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.36
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.35
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.34
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.34
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.34
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.33
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.31
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.31
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.25
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.25
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.2
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.13

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=3e-20  Score=122.05  Aligned_cols=97  Identities=21%  Similarity=0.271  Sum_probs=65.4

Q ss_pred             CCcccC---CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGLG---SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~~---~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.+   +.++.++|||||||++|||++|+.||...... ..+...+......       +.+..         .+..
T Consensus       175 PE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~-~~~~~~~~~~~~~-------p~~~~---------~~~~  237 (276)
T d1uwha_         175 PEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR-DQIIFMVGRGYLS-------PDLSK---------VRSN  237 (276)
T ss_dssp             HHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH-HHHHHHHHHTSCC-------CCGGG---------SCTT
T ss_pred             HHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChH-HHHHHHHhcCCCC-------Ccchh---------cccc
Confidence            566643   45899999999999999999999998643211 1111112111111       11100         0113


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ++..+.+++.+||+.+|.+|||+.+++..|+.+.++.
T Consensus       238 ~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~l~~~~  274 (276)
T d1uwha_         238 CPKAMKRLMAECLKKKRDERPLFPQILASIELLARSL  274 (276)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTC
T ss_pred             chHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHcC
Confidence            4567889999999999999999999999999887653

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=6.6e-20  Score=119.56  Aligned_cols=92  Identities=20%  Similarity=0.210  Sum_probs=64.0

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||++|||+++..|+.... ....+...+......     ..+               ..++.
T Consensus       171 PE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~-~~~~~~~~i~~~~~~-----~~p---------------~~~~~  229 (263)
T d1sm2a_         171 PEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR-SNSEVVEDISTGFRL-----YKP---------------RLAST  229 (263)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSC-CHHHHHHHHHHTCCC-----CCC---------------TTSCH
T ss_pred             hHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCC-CHHHHHHHHHhcCCC-----CCc---------------cccCH
Confidence            788888999999999999999999999544432211 111122222211110     011               13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      .+.+++..||+.+|.+|||+.+|++.|+++.++
T Consensus       230 ~l~~li~~cl~~~p~~Rps~~~il~~L~~i~es  262 (263)
T d1sm2a_         230 HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES  262 (263)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhC
Confidence            678999999999999999999999999988764

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.4e-20  Score=121.30  Aligned_cols=95  Identities=19%  Similarity=0.206  Sum_probs=68.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||++|||++ |+.||....  ...+...+.   .+..     +..            +..++
T Consensus       181 PE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~--~~~~~~~i~---~~~~-----~~~------------p~~~~  238 (285)
T d1u59a_         181 PECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIE---QGKR-----MEC------------PPECP  238 (285)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHH---TTCC-----CCC------------CTTCC
T ss_pred             hHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCCC-----CCC------------CCcCC
Confidence            677777889999999999999999998 899986432  112222222   1110     011            11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      ..+.+++..||+.+|.+||||.+|.+.|+.+..+....
T Consensus       239 ~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~~~~  276 (285)
T d1u59a_         239 PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASK  276 (285)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHhhhc
Confidence            57889999999999999999999999999887765443

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=1.4e-19  Score=118.09  Aligned_cols=91  Identities=19%  Similarity=0.167  Sum_probs=65.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++|||++ |+.|+...  ....+...+..   +.     .+.+.            ....
T Consensus       169 PE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~--~~~~~~~~i~~---~~-----~~~~~------------~~~~  226 (262)
T d1byga_         169 PEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRI--PLKDVVPRVEK---GY-----KMDAP------------DGCP  226 (262)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS--CGGGHHHHHTT---TC-----CCCCC------------TTCC
T ss_pred             hHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCC--CHHHHHHHHHc---CC-----CCCCC------------ccCC
Confidence            677888899999999999999999998 67776532  12223333321   11     11111            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++..||+.+|.+|||+.++++.|+++...
T Consensus       227 ~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~~~  260 (262)
T d1byga_         227 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH  260 (262)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHhC
Confidence            5778999999999999999999999999988654

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=7.1e-20  Score=120.26  Aligned_cols=95  Identities=18%  Similarity=0.193  Sum_probs=67.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++|||++ |+.||....  ...+...+.   .+...         ..+        ..++
T Consensus       179 PE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~--~~~~~~~i~---~~~~~---------~~p--------~~~~  236 (277)
T d1xbba_         179 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK--GSEVTAMLE---KGERM---------GCP--------AGCP  236 (277)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCC--HHHHHHHHH---TTCCC---------CCC--------TTCC
T ss_pred             chhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCC--HHHHHHHHH---cCCCC---------CCC--------cccC
Confidence            677778889999999999999999998 899986432  111222221   11100         111        1344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      ..+.+++..||+.+|.+|||+.+|...|+.......++
T Consensus       237 ~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~~~e  274 (277)
T d1xbba_         237 REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE  274 (277)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhcCCC
Confidence            57789999999999999999999999999887665443

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.75  E-value=1.2e-19  Score=120.41  Aligned_cols=91  Identities=19%  Similarity=0.280  Sum_probs=65.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++|||||||++|||++ |+.||....  ...+...+.   .+.       +.  ..+        ..++
T Consensus       202 PE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~--~~~~~~~i~---~~~-------~~--~~~--------~~~~  259 (299)
T d1jpaa_         202 PEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMT--NQDVINAIE---QDY-------RL--PPP--------MDCP  259 (299)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--HHHHHHHHH---TTC-------CC--CCC--------TTCC
T ss_pred             HHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCC--HHHHHHHHH---cCC-------CC--CCC--------ccch
Confidence            577778899999999999999999998 899986422  111222221   110       00  011        1345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++..||+.+|.+|||+.+|+..|+++.+.
T Consensus       260 ~~l~~li~~cl~~~P~~RPs~~ei~~~L~~~l~~  293 (299)
T d1jpaa_         260 SALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN  293 (299)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhcC
Confidence            6788999999999999999999999999988764

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=1.5e-19  Score=119.02  Aligned_cols=92  Identities=14%  Similarity=0.213  Sum_probs=64.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|||||||++|||+++..|+..... ...+...+.   .+         .....+        ..++.
T Consensus       182 PE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~-~~~~~~~i~---~~---------~~~~~~--------~~~~~  240 (283)
T d1mqba_         182 PEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS-NHEVMKAIN---DG---------FRLPTP--------MDCPS  240 (283)
T ss_dssp             HHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC-HHHHHHHHH---TT---------CCCCCC--------TTCBH
T ss_pred             HHHHccCCCCCcccccccHHHHHHHHhCCCCccccCC-HHHHHHHHh---cc---------CCCCCc--------hhhHH
Confidence            6888889999999999999999999997666432111 111222211   11         111111        13445


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      .+.+++.+||+.+|.+||++.+|+..|+.+.+.
T Consensus       241 ~l~~li~~cl~~~p~~RPt~~eil~~L~~l~~~  273 (283)
T d1mqba_         241 AIYQLMMQCWQQERARRPKFADIVSILDKLIRA  273 (283)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHCcCCHhHCcCHHHHHHHHHHHhhC
Confidence            688999999999999999999999999987764

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=1.1e-18  Score=115.54  Aligned_cols=93  Identities=18%  Similarity=0.191  Sum_probs=65.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCC-CCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTK-KPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++|||||||++|||+++. .|+..... ...+...+.....        +.+    +.        ..+
T Consensus       205 PE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~-~~~~~~~~~~~~~--------~~~----~~--------~~~  263 (299)
T d1ywna1         205 PETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI-DEEFCRRLKEGTR--------MRA----PD--------YTT  263 (299)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCC-SHHHHHHHHHTCC--------CCC----CT--------TCC
T ss_pred             hhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcCCC--------CCC----Cc--------cCC
Confidence            67778888999999999999999999865 46643221 1112222221111        111    11        334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      ..+.+++..||+.+|.+|||+.++++.|+++++++
T Consensus       264 ~~l~~li~~cl~~dP~~Rpt~~eil~~L~~ilq~n  298 (299)
T d1ywna1         264 PEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN  298 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCC
Confidence            56789999999999999999999999999998764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=1.5e-19  Score=120.47  Aligned_cols=96  Identities=16%  Similarity=0.289  Sum_probs=66.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++||||||+++|||++|..|+..... ...+...+.   .+..     +..            +..+..
T Consensus       203 PE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~-~~~~~~~i~---~g~~-----~~~------------p~~~~~  261 (311)
T d1r0pa_         203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN-TFDITVYLL---QGRR-----LLQ------------PEYCPD  261 (311)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-------CHHHHH---TTCC-----CCC------------CTTCCH
T ss_pred             hHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCC-HHHHHHHHH---cCCC-----CCC------------cccCcH
Confidence            5677778899999999999999999998877653221 111222221   1110     000            113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHHhhh
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNILLKH  117 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~~~~  117 (127)
                      .+.+++..||+.+|.+||++.+|+..|+++.+....+
T Consensus       262 ~l~~li~~cl~~dP~~RPs~~ei~~~L~~i~~~~~~~  298 (311)
T d1r0pa_         262 PLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGE  298 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCCSC
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHhhhhh
Confidence            6789999999999999999999999999998765543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.5e-19  Score=119.98  Aligned_cols=87  Identities=22%  Similarity=0.237  Sum_probs=63.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||++|||++ |+.||..... ...+...+....            ....+        ..++
T Consensus       235 PE~l~~~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~-~~~~~~~~~~~~------------~~~~p--------~~~~  293 (325)
T d1rjba_         235 PESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV-DANFYKLIQNGF------------KMDQP--------FYAT  293 (325)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC-SHHHHHHHHTTC------------CCCCC--------TTCC
T ss_pred             hHHHcCCCCCcceeccchhHHHHHHHhCCCCCCCCCCH-HHHHHHHHhcCC------------CCCCC--------CcCC
Confidence            677888899999999999999999998 8999864321 111222222111            11111        1345


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQ  108 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~  108 (127)
                      ..+.+++..||+.+|.+|||+.+|++.|.
T Consensus       294 ~~l~~li~~cl~~dP~~RPt~~ei~~~L~  322 (325)
T d1rjba_         294 EEIYIIMQSCWAFDSRKRPSFPNLTSFLG  322 (325)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHh
Confidence            67889999999999999999999999885

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.72  E-value=1.1e-18  Score=115.61  Aligned_cols=89  Identities=19%  Similarity=0.230  Sum_probs=62.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCC-CCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTK-KPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++....++.++|||||||++|||+++. .|+....     ..+.......+....     +            +..++
T Consensus       211 PE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~-----~~e~~~~v~~~~~~~-----~------------p~~~~  268 (301)
T d1lufa_         211 PESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA-----HEEVIYYVRDGNILA-----C------------PENCP  268 (301)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCCCC-----C------------CTTCC
T ss_pred             HHHHccCCCChhhhhccchhhHHHHHccCCCCCCCCC-----HHHHHHHHHcCCCCC-----C------------Cccch
Confidence            56677778999999999999999999986 4554321     112222111111111     1            11334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVK  111 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~  111 (127)
                      ..+.+++.+||+.+|.+||||.+|++.|+++.
T Consensus       269 ~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         269 LELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            57889999999999999999999999999874

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=2.7e-19  Score=117.15  Aligned_cols=92  Identities=18%  Similarity=0.179  Sum_probs=63.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|||||||++|||++|..|+..... ...+...+.   .+.     .+...            ..++.
T Consensus       179 PE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~-~~~~~~~i~---~~~-----~~~~p------------~~~~~  237 (272)
T d1qpca_         179 PEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPEVIQNLE---RGY-----RMVRP------------DNCPE  237 (272)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHH---TTC-----CCCCC------------TTCCH
T ss_pred             hHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCC-HHHHHHHHH---hcC-----CCCCc------------ccChH
Confidence            6777778899999999999999999996665432111 111112211   110     01111            13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      .+.+++..||+.+|.+|||+.+|+..|+.+..+
T Consensus       238 ~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            678999999999999999999999999987654

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=8.2e-19  Score=114.82  Aligned_cols=91  Identities=14%  Similarity=0.169  Sum_probs=66.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+.++.++|||||||++|||++ |..|+....  ...+...+.....   .     .+            +..++
T Consensus       178 pE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~--~~~~~~~i~~~~~---~-----~~------------~~~~~  235 (273)
T d1mp8a_         178 PESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK--NNDVIGRIENGER---L-----PM------------PPNCP  235 (273)
T ss_dssp             HHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCC--GGGHHHHHHTTCC---C-----CC------------CTTCC
T ss_pred             hhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCC---C-----CC------------CCCCC
Confidence            567777889999999999999999998 888876432  2223222221110   0     01            11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++..||+.+|.+|||+.+|+..|+.+.+.
T Consensus       236 ~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  269 (273)
T d1mp8a_         236 PTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE  269 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            5788999999999999999999999999988765

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.8e-18  Score=115.15  Aligned_cols=93  Identities=17%  Similarity=0.163  Sum_probs=64.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++||||||+++|||+++..|+.........+...+.....            ...+        ...+.
T Consensus       216 PE~~~~~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~------------~~~~--------~~~~~  275 (311)
T d1t46a_         216 PESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR------------MLSP--------EHAPA  275 (311)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC------------CCCC--------TTSCH
T ss_pred             HHHhcCCCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCC------------CCCc--------ccccH
Confidence            567777889999999999999999999555543222112222222221111            1111        13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      .+.+++..||+.+|.+|||+.+++..|+++...
T Consensus       276 ~l~~Li~~cl~~dP~~RPs~~~il~~L~~~i~~  308 (311)
T d1t46a_         276 EMYDIMKTCWDADPLKRPTFKQIVQLIEKQISE  308 (311)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHHHHHHhhcc
Confidence            788999999999999999999999999987665

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=8.5e-19  Score=116.97  Aligned_cols=90  Identities=21%  Similarity=0.264  Sum_probs=65.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++|||++ |..||....  ...+...+.....            ...        +..++
T Consensus       182 PE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~--~~~~~~~i~~~~~------------~~~--------p~~~~  239 (317)
T d1xkka_         182 LESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP--ASEISSILEKGER------------LPQ--------PPICT  239 (317)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--GGGHHHHHHHTCC------------CCC--------CTTBC
T ss_pred             hHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCC------------CCC--------CcccC
Confidence            677888899999999999999999998 788876432  1222222221110            011        11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++.+||+.+|.+|||+.+++..|..+..
T Consensus       240 ~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~~  272 (317)
T d1xkka_         240 IDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR  272 (317)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCChhhCcCHHHHHHHHHHHHh
Confidence            577899999999999999999999999887754

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=7.6e-19  Score=116.36  Aligned_cols=90  Identities=21%  Similarity=0.287  Sum_probs=63.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.++.++.++|||||||++|||++ |..|+....  ...+...+..   +.     .+....            ..+
T Consensus       206 PE~l~~~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~--~~~~~~~i~~---~~-----~~~~p~------------~~~  263 (299)
T d1fgka_         206 PEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP--VEELFKLLKE---GH-----RMDKPS------------NCT  263 (299)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHHT---TC-----CCCCCS------------SCC
T ss_pred             hhHhcCCCCCchhhhHHhHHHHHHhccCCCCCCCCCC--HHHHHHHHHc---CC-----CCCCCc------------cch
Confidence            567778899999999999999999998 677775322  1112222211   10     011111            234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      ..+.+++.+||+.+|.+|||+.+|++.|+++..
T Consensus       264 ~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~a  296 (299)
T d1fgka_         264 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA  296 (299)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHHHHHhh
Confidence            568899999999999999999999999998864

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=4e-19  Score=116.45  Aligned_cols=89  Identities=18%  Similarity=0.148  Sum_probs=61.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++|||||||++|||++ |+.||....     ..+..........    .+...            ...+
T Consensus       183 PE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~-----~~~~~~~i~~~~~----~~~~~------------~~~~  241 (273)
T d1u46a_         183 PESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN-----GSQILHKIDKEGE----RLPRP------------EDCP  241 (273)
T ss_dssp             HHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC-----HHHHHHHHHTSCC----CCCCC------------TTCC
T ss_pred             HHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcC-----HHHHHHHHHhCCC----CCCCc------------cccc
Confidence            566677788999999999999999998 899986321     1122222111110    00000            1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHh
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSV  110 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~  110 (127)
                      ..+.+++..||+.+|.+|||+.+|++.|.+.
T Consensus       242 ~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~  272 (273)
T d1u46a_         242 QDIYNVMVQCWAHKPEDRPTFVALRDFLLEA  272 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence            5678999999999999999999999888754

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.5e-19  Score=114.59  Aligned_cols=87  Identities=15%  Similarity=0.200  Sum_probs=61.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHc-CCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMET-TKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++|||++ |+.||.....  ..+...+.   .+.  .       ...+        ..++
T Consensus       170 PE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~--~~~~~~i~---~~~--~-------~~~p--------~~~~  227 (258)
T d1k2pa_         170 PEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--SETAEHIA---QGL--R-------LYRP--------HLAS  227 (258)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHHH---TTC--C-------CCCC--------TTCC
T ss_pred             cHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCH--HHHHHHHH---hCC--C-------CCCc--------cccc
Confidence            677778889999999999999999998 7888864321  11222221   110  0       0001        1334


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQS  109 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~  109 (127)
                      ..+.+++..||+.+|.+|||+.+++..|..
T Consensus       228 ~~l~~li~~cl~~dP~~RPt~~eil~~L~d  257 (258)
T d1k2pa_         228 EKVYTIMYSCWHEKADERPTFKILLSNILD  257 (258)
T ss_dssp             HHHHHHHHHTTCSSGGGSCCHHHHHHHHHC
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHHHHhhC
Confidence            578899999999999999999999988753

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=2.6e-17  Score=109.12  Aligned_cols=94  Identities=12%  Similarity=0.212  Sum_probs=61.1

Q ss_pred             CCCcccchhhhHHHHHHHcCCCCCCccccCC----------CcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            9 VSTNGDVYSYGILLLEMETTKKPTDVMFEGD----------LNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         9 ~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ++.++|||||||++|||++|..|+.......          ..............    ..+.+..       .......
T Consensus       195 ~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~p~~~~-------~~~~~~~  263 (303)
T d1vjya_         195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPN-------RWQSCEA  263 (303)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG-------GGGGCHH
T ss_pred             cCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccc----cCCCCCc-------ccCChHH
Confidence            6778999999999999999987764322111          11111111111111    1111111       1112256


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ...+.+++.+||+.+|.+|||+.+|+..|+++...
T Consensus       264 ~~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~~~  298 (303)
T d1vjya_         264 LRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ  298 (303)
T ss_dssp             HHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHh
Confidence            67789999999999999999999999999988765

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=1.1e-18  Score=115.97  Aligned_cols=91  Identities=23%  Similarity=0.255  Sum_probs=63.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCC-CCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKK-PTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+..+.++.++|||||||++|||++|.. |+...     ...........+.     .+..            +..++
T Consensus       195 PE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~-----~~~~~~~~i~~~~-----~~~~------------~~~~~  252 (309)
T d1fvra_         195 IESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM-----TCAELYEKLPQGY-----RLEK------------PLNCD  252 (309)
T ss_dssp             HHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC-----CHHHHHHHGGGTC-----CCCC------------CTTBC
T ss_pred             hHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCC-----CHHHHHHHHHhcC-----CCCC------------CccCC
Confidence            567777889999999999999999999765 55321     1222222111110     0111            11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++.+||+.+|.+|||+.+|+..|+++.+.
T Consensus       253 ~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~~~  286 (309)
T d1fvra_         253 DEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE  286 (309)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence            5788999999999999999999999999988754

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=7.2e-19  Score=115.93  Aligned_cols=92  Identities=16%  Similarity=0.196  Sum_probs=63.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||++|||+++..|+.... +...+...+....            ....+.        .++.
T Consensus       185 PE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~-~~~~~~~~i~~~~------------~~~~~~--------~~~~  243 (287)
T d1opja_         185 PESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI-DLSQVYELLEKDY------------RMERPE--------GCPE  243 (287)
T ss_dssp             HHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTC-CHHHHHHHHHTTC------------CCCCCT--------TCCH
T ss_pred             hHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcc-hHHHHHHHHhcCC------------CCCCCc--------cchH
Confidence            677888899999999999999999999777653211 1111112221111            111111        3345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      .+.+++..||+.+|.+|||+.+|+..|+.+.+.
T Consensus       244 ~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~~~  276 (287)
T d1opja_         244 KVYELMRACWQWNPSDRPSFAEIHQAFETMFQE  276 (287)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTSS
T ss_pred             HHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHh
Confidence            788999999999999999999999999877543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=1.5e-17  Score=109.47  Aligned_cols=91  Identities=19%  Similarity=0.199  Sum_probs=63.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++..+.++.++|||||||++|||++|..|+..... ...+...+.   .+..     ..+.            ..+++
T Consensus       183 PE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~-~~~~~~~i~---~~~~-----~~~~------------~~~~~  241 (285)
T d1fmka3         183 PEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-NREVLDQVE---RGYR-----MPCP------------PECPE  241 (285)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-HHHHHHHHH---TTCC-----CCCC------------TTSCH
T ss_pred             hHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCC-HHHHHHHHH---hcCC-----CCCC------------cccCH
Confidence            6778888999999999999999999997666543211 111222221   1110     0111            13345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHHHHHHhHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVHELQSVKN  112 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~  112 (127)
                      .+.+++.+||+.+|.+||++.+|+..|+....
T Consensus       242 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~  273 (285)
T d1fmka3         242 SLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT  273 (285)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred             HHHHHHHHHcccCHhHCcCHHHHHHHHhhhhc
Confidence            77899999999999999999999998887653

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=3.7e-17  Score=108.58  Aligned_cols=91  Identities=16%  Similarity=0.271  Sum_probs=62.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCC-CCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTK-KPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.++.++.++||||||+++|||++|. .|+...     ...........+....     +            +..++
T Consensus       204 Pe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~-----~~~~~~~~i~~~~~~~-----~------------p~~~~  261 (308)
T d1p4oa_         204 PESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGL-----SNEQVLRFVMEGGLLD-----K------------PDNCP  261 (308)
T ss_dssp             HHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-----CHHHHHHHHHTTCCCC-----C------------CTTCC
T ss_pred             HHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCC-----CHHHHHHHHHhCCCCC-----C------------cccch
Confidence            56667788999999999999999999975 555421     1112222111111111     0            11344


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      ..+.+++.+||+.+|.+|||+.+|+..|++..+.
T Consensus       262 ~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~  295 (308)
T d1p4oa_         262 DMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP  295 (308)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence            5789999999999999999999999998876543

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.63  E-value=4.4e-17  Score=106.40  Aligned_cols=83  Identities=14%  Similarity=0.104  Sum_probs=58.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++|||||||++|||++|+.||....  ...+...+.   .+...     .+..            ..+.
T Consensus       183 PE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~--~~~~~~~i~---~~~~~-----~~~~------------~~s~  240 (269)
T d2java1         183 PEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS--QKELAGKIR---EGKFR-----RIPY------------RYSD  240 (269)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHH---HTCCC-----CCCT------------TSCH
T ss_pred             HHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCC--HHHHHHHHH---cCCCC-----CCCc------------ccCH
Confidence            688888899999999999999999999999986422  111111111   11110     1111            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.++++
T Consensus       241 ~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         241 ELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHHh
Confidence            6788999999999999999998863

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=5e-17  Score=105.85  Aligned_cols=82  Identities=15%  Similarity=0.092  Sum_probs=58.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++|||++|+.||....     ............      ..+..            ..+.
T Consensus       173 PE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~s~  229 (263)
T d2j4za1         173 PEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT-----YQETYKRISRVE------FTFPD------------FVTE  229 (263)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHTTC------CCCCT------------TSCH
T ss_pred             HHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCC------CCCCc------------cCCH
Confidence            788888889999999999999999999999986321     111111111110      00111            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       230 ~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         230 GARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHHc
Confidence            6788999999999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.60  E-value=4.5e-16  Score=101.60  Aligned_cols=84  Identities=19%  Similarity=0.260  Sum_probs=56.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+. +.++.++|||||||++|||++|+.||....    ...........+....    ..            +.....
T Consensus       182 PE~~~-~~~~~~~DIwSlGvilyel~~g~~Pf~~~~----~~~~~~~~i~~~~~~~----~~------------~~~~~~  240 (270)
T d1t4ha_         182 PEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQ----NAAQIYRRVTSGVKPA----SF------------DKVAIP  240 (270)
T ss_dssp             GGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS----SHHHHHHHHTTTCCCG----GG------------GGCCCH
T ss_pred             HHHhC-CCCCCcCchhhHHHHHHHHHHCCCCCCCcc----cHHHHHHHHHcCCCCc----cc------------CccCCH
Confidence            78765 469999999999999999999999986321    1111111111111000    00            012234


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       241 ~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         241 EVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhC
Confidence            5788999999999999999999864

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.60  E-value=3.1e-16  Score=102.56  Aligned_cols=92  Identities=20%  Similarity=0.233  Sum_probs=63.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++|||||||+++||++|+.||....     ..............   .+...           ....+.
T Consensus       183 PE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~~~~~~~~---~~~~~-----------~~~~s~  243 (277)
T d1o6ya_         183 PEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDS-----PVSVAYQHVREDPI---PPSAR-----------HEGLSA  243 (277)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHHCCCC---CGGGT-----------SSSCCH
T ss_pred             HHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcC-----HHHHHHHHHhcCCC---CCchh-----------ccCCCH
Confidence            678888889999999999999999999999986321     11222111111000   00000           002345


Q ss_pred             HHHHHhhhccCCCccCCC-CHHHHHHHHHHhH
Q 042057           81 SMVRIGVACSMESPQDRM-NITNVVHELQSVK  111 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-s~~~v~~~L~~~~  111 (127)
                      .+.+++.+|++.+|.+|| |+.++...|.++.
T Consensus       244 ~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~~  275 (277)
T d1o6ya_         244 DLDAVVLKALAKNPENRYQTAAEMRADLVRVH  275 (277)
T ss_dssp             HHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCHhHHHHHHHHHHHHh
Confidence            678899999999999999 7999988888764

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.59  E-value=1.5e-16  Score=105.05  Aligned_cols=96  Identities=13%  Similarity=0.116  Sum_probs=63.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCc--HHHHHHhhcCCccccccccccccCCCCcchhhhHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLN--LHRFARMALPDHVVYIVDPILLNDGKGETRINSRLAC   78 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   78 (127)
                      ||.+.+..++.++|||||||+++||++|+.||.........  ...........     ..+.+            ...+
T Consensus       182 PE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------------~~~~  244 (299)
T d1ckia_         182 INTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMST-----PIEVL------------CKGY  244 (299)
T ss_dssp             HHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHS-----CHHHH------------TTTS
T ss_pred             HHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCC-----ChhHh------------ccCC
Confidence            56667778999999999999999999999998653321110  00110000000     00000            1123


Q ss_pred             HHHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHH
Q 042057           79 VNSMVRIGVACSMESPQDRMNITNVVHELQSVKNI  113 (127)
Q Consensus        79 ~~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~  113 (127)
                      +..+.+++..||+.+|.+||++.++.+.|+.+..+
T Consensus       245 p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         245 PSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             CHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHH
Confidence            45788999999999999999999999888887654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.57  E-value=5.5e-16  Score=102.87  Aligned_cols=86  Identities=12%  Similarity=-0.025  Sum_probs=59.3

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||+||++|||++|+.||....     .............      ......        ....+.
T Consensus       178 PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~~~~~~~i~~~~~------~~~~~~--------~~~~s~  238 (307)
T d1a06a_         178 PEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEN-----DAKLFEQILKAEY------EFDSPY--------WDDISD  238 (307)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS-----HHHHHHHHHTTCC------CCCTTT--------TTTSCH
T ss_pred             cHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCC-----HHHHHHHHhccCC------CCCCcc--------ccCCCH
Confidence            788888889999999999999999999999986421     1111111111100      000000        013345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+|||+.+++.
T Consensus       239 ~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         239 SAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhc
Confidence            6789999999999999999999875

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=2e-16  Score=104.19  Aligned_cols=80  Identities=16%  Similarity=0.224  Sum_probs=54.0

Q ss_pred             CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHH
Q 042057            6 GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRI   85 (127)
Q Consensus         6 ~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l   85 (127)
                      ...++.++|||||||++|||++|+.||.....  ......+..   +..     +.+.          .+...+..+.++
T Consensus       189 ~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~--~~~~~~i~~---~~~-----~~~~----------~~~~~s~~~~~l  248 (288)
T d2jfla1         189 DRPYDYKADVWSLGITLIEMAEIEPPHHELNP--MRVLLKIAK---SEP-----PTLA----------QPSRWSSNFKDF  248 (288)
T ss_dssp             TSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG--GGHHHHHHH---SCC-----CCCS----------SGGGSCHHHHHH
T ss_pred             CCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH--HHHHHHHHc---CCC-----CCCC----------ccccCCHHHHHH
Confidence            45688999999999999999999999864321  111111111   100     0000          011334577899


Q ss_pred             hhhccCCCccCCCCHHHHHH
Q 042057           86 GVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        86 ~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +.+||+.+|.+|||+.+++.
T Consensus       249 i~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         249 LKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHccCChhHCcCHHHHhc
Confidence            99999999999999999865

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.9e-16  Score=101.98  Aligned_cols=85  Identities=18%  Similarity=0.194  Sum_probs=56.2

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..+ +.++||||+||+++||++|+.||............+..   .....   .+              .....
T Consensus       174 PE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~---~~~~~---~~--------------~~~~s  233 (271)
T d1nvra_         174 PELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KKTYL---NP--------------WKKID  233 (271)
T ss_dssp             THHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHT---TCTTS---TT--------------GGGSC
T ss_pred             HhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhc---CCCCC---Cc--------------cccCC
Confidence            787777765 67899999999999999999998643322211111110   00000   00              01223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||+.+|.+|||+.+++.
T Consensus       234 ~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         234 SAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            46678999999999999999998753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=6.1e-16  Score=102.06  Aligned_cols=85  Identities=14%  Similarity=0.054  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.++.++.++||||+||++|+|++|+.||....     ..............     .+.          .+...+.
T Consensus       185 PE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~~~~~~~~~-----~~~----------~~~~~s~  244 (293)
T d1yhwa1         185 PEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN-----PLRALYLIATNGTP-----ELQ----------NPEKLSA  244 (293)
T ss_dssp             HHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHHCSC-----CCS----------SGGGSCH
T ss_pred             hhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCC-----HHHHHHHHHhCCCC-----CCC----------CcccCCH
Confidence            688888889999999999999999999999986322     11111111100000     000          0113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       245 ~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         245 IFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6788999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.56  E-value=3.7e-16  Score=103.02  Aligned_cols=86  Identities=10%  Similarity=-0.019  Sum_probs=58.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++|||||||++|||++|+.||....     ..+..........      ...        ...+...+.
T Consensus       185 PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~~~~~~~i~~~~~------~~~--------~~~~~~~s~  245 (293)
T d1jksa_         185 PEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT-----KQETLANVSAVNY------EFE--------DEYFSNTSA  245 (293)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHTTCC------CCC--------HHHHTTSCH
T ss_pred             HHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCC-----HHHHHHHHHhcCC------CCC--------chhcCCCCH
Confidence            677888889999999999999999999999986321     1111111111100      000        001113345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+|||+.+++.
T Consensus       246 ~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         246 LAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6789999999999999999999864

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.55  E-value=1.7e-15  Score=101.54  Aligned_cols=90  Identities=12%  Similarity=-0.012  Sum_probs=59.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||+||++|+|++|+.||.......  ....+..       .+......  .+    .......+.
T Consensus       182 PE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~--~~~~~~~-------~i~~~~~~--~~----~~~~~~~s~  246 (335)
T d2ozaa1         182 PEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--ISPGMKT-------RIRMGQYE--FP----NPEWSEVSE  246 (335)
T ss_dssp             CCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-----------------CCCSCSSS--CC----TTHHHHSCH
T ss_pred             cHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHH--HHHHHHH-------HHhcCCCC--CC----CcccccCCH
Confidence            788888899999999999999999999999986432111  1110000       00000000  00    011224456


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+|+..+|.+|||+.+++.
T Consensus       247 ~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         247 EVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHHc
Confidence            7899999999999999999999875

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=1.6e-15  Score=100.68  Aligned_cols=84  Identities=21%  Similarity=0.189  Sum_probs=56.2

Q ss_pred             CCccc---CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHH
Q 042057            1 VEYGL---GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLA   77 (127)
Q Consensus         1 pE~~~---~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
                      ||++.   .+.++.++|||||||++|||++|+.||....     .............     +.....           .
T Consensus       180 PE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~-----~~~~~~~i~~~~~-----~~~~~~-----------~  238 (309)
T d1u5ra_         180 PEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN-----AMSALYHIAQNES-----PALQSG-----------H  238 (309)
T ss_dssp             HHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCC-----CCCSCT-----------T
T ss_pred             HHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHhCCC-----CCCCCC-----------C
Confidence            56664   3568999999999999999999999986321     1111111111110     011100           2


Q ss_pred             HHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           78 CVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        78 ~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+..+.+++.+||+.+|.+|||+.+++.
T Consensus       239 ~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         239 WSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             CCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            3456789999999999999999999874

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.51  E-value=4.9e-15  Score=98.78  Aligned_cols=34  Identities=29%  Similarity=0.411  Sum_probs=31.7

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDV   34 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~   34 (127)
                      ||++.+..++.++||||+||+++||++|+.||..
T Consensus       172 PEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~  205 (322)
T d1s9ja_         172 PERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP  205 (322)
T ss_dssp             HHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSC
T ss_pred             chHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence            7888888999999999999999999999999864

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=3.3e-15  Score=98.69  Aligned_cols=103  Identities=14%  Similarity=0.025  Sum_probs=59.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC---cccc---ccccccccCCCCcchhhh
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD---HVVY---IVDPILLNDGKGETRINS   74 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~   74 (127)
                      ||++.+..++.++||||+||+++||++|+.||..... ...+..........   .+..   ........... ......
T Consensus       184 PE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  261 (305)
T d1blxa_         184 PEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSD-VDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSA-QPIEKF  261 (305)
T ss_dssp             HHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCC-CCGGGT
T ss_pred             cchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCH-HHHHHHHHHhhCCCchhcccccccchhhhhccccc-cchhhc
Confidence            7888889999999999999999999999999864321 11111111111000   0000   00000000000 000001


Q ss_pred             HHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           75 RLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        75 ~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .......+.+++.+||+.+|.+|||+.+++.
T Consensus       262 ~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~  292 (305)
T d1blxa_         262 VTDIDELGKDLLLKCLTFNPAKRISAYSALS  292 (305)
T ss_dssp             CCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             cccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            1123456788999999999999999998764

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.50  E-value=3.2e-15  Score=100.77  Aligned_cols=86  Identities=16%  Similarity=0.065  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||+||+++||++|+.||....     ..+.......... . .....            ....+.
T Consensus       194 PEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~-----~~~~~~~i~~~~~-~-~~~~~------------~~~~s~  254 (350)
T d1koaa2         194 PEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-----DDETLRNVKSCDW-N-MDDSA------------FSGISE  254 (350)
T ss_dssp             HHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC-C-SCCGG------------GGGCCH
T ss_pred             HHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC-C-CCccc------------ccCCCH
Confidence            677888889999999999999999999999986321     1111111111100 0 00000            012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+|||+.+++.
T Consensus       255 ~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         255 DGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6788999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.49  E-value=5e-16  Score=102.23  Aligned_cols=82  Identities=6%  Similarity=-0.014  Sum_probs=57.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||++|||++|+.||....     ............      ..+..            ....
T Consensus       179 PE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~s~  235 (288)
T d1uu3a_         179 PELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN-----EYLIFQKIIKLE------YDFPE------------KFFP  235 (288)
T ss_dssp             HHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHTTC------CCCCT------------TCCH
T ss_pred             ceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcC-----HHHHHHHHHcCC------CCCCc------------cCCH
Confidence            678888889999999999999999999999986321     111111111111      01111            2334


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||..+|.+|||+.++..
T Consensus       236 ~~~~li~~~L~~dP~~R~t~~e~~~  260 (288)
T d1uu3a_         236 KARDLVEKLLVLDATKRLGCEEMEG  260 (288)
T ss_dssp             HHHHHHHTTSCSSGGGSTTSGGGTC
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHcC
Confidence            6788999999999999999998643

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.49  E-value=4.6e-15  Score=100.04  Aligned_cols=86  Identities=10%  Similarity=-0.032  Sum_probs=58.5

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||+||+++||++|+.||....     ............      .......        ....+.
T Consensus       197 PE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~-----~~~~~~~i~~~~------~~~~~~~--------~~~~s~  257 (352)
T d1koba_         197 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGED-----DLETLQNVKRCD------WEFDEDA--------FSSVSP  257 (352)
T ss_dssp             HHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-----HHHHHHHHHHCC------CCCCSST--------TTTSCH
T ss_pred             HHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCC------CCCCccc--------ccCCCH
Confidence            677888889999999999999999999999986321     111111111110      0000000        012345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+||+.+|.+|||+.+++.
T Consensus       258 ~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         258 EAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6789999999999999999999875

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.46  E-value=2e-15  Score=98.57  Aligned_cols=76  Identities=18%  Similarity=0.203  Sum_probs=53.4

Q ss_pred             CCcccCCCC-CCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGV-STNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~-s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++.+..+ +.++||||+||++|||++|+.||....       ...+    ..      .....            ..+
T Consensus       178 PE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~-------~i~~----~~------~~~~~------------~~s  228 (273)
T d1xwsa_         178 PEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE-------EIIR----GQ------VFFRQ------------RVS  228 (273)
T ss_dssp             HHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH-------HHHH----CC------CCCSS------------CCC
T ss_pred             HHHHcCCCCCCcccccccceeeehhHhhCCCCCCCch-------HHhh----cc------cCCCC------------CCC
Confidence            566665554 677899999999999999999986321       0111    00      00001            223


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..+.+++.+||..+|.+|||+.+++.
T Consensus       229 ~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         229 SECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            46788999999999999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.45  E-value=8.5e-15  Score=96.41  Aligned_cols=98  Identities=9%  Similarity=-0.050  Sum_probs=64.9

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC-cHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL-NLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||.+.+..++.++||||||++++||++|+.||........ .....+........    -+.+.            ..++
T Consensus       182 PE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~----~~~l~------------~~~p  245 (293)
T d1csna_         182 INTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTP----LRELC------------AGFP  245 (293)
T ss_dssp             HHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSC----HHHHT------------TTSC
T ss_pred             HHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCC----hHHhc------------CCCC
Confidence            6777778899999999999999999999999864322111 11111110000000    00010            1234


Q ss_pred             HHHHHHhhhccCCCccCCCCHHHHHHHHHHhHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMNITNVVHELQSVKNIL  114 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs~~~v~~~L~~~~~~~  114 (127)
                      +.+..++..||+.+|.+||++..+...|+.+....
T Consensus       246 ~~l~~ii~~~~~~~~~~rP~y~~l~~~l~~~~~~~  280 (293)
T d1csna_         246 EEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERL  280 (293)
T ss_dssp             HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHHHc
Confidence            56888999999999999999999888888776543

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.43  E-value=2.1e-14  Score=97.13  Aligned_cols=84  Identities=15%  Similarity=0.146  Sum_probs=55.7

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHH
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACV   79 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (127)
                      ||++..+ .++.++|||||||++|||++|+.||......  ......+......      .....            ..+
T Consensus       174 PE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~--~~~~~~~~~~~~~------~~~~~------------~~s  233 (364)
T d1omwa3         174 PEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMTLTMA------VELPD------------SFS  233 (364)
T ss_dssp             HHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSS--CHHHHHHHSSSCC------CCCCS------------SSC
T ss_pred             hHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcccCC------CCCCC------------CCC
Confidence            6777654 5899999999999999999999998643221  1222222111110      00000            233


Q ss_pred             HHHHHHhhhccCCCccCCCC-----HHHHH
Q 042057           80 NSMVRIGVACSMESPQDRMN-----ITNVV  104 (127)
Q Consensus        80 ~~~~~l~~~c~~~~p~~RPs-----~~~v~  104 (127)
                      ..+.+++.+||..+|.+|||     +.+++
T Consensus       234 ~~~~~li~~~L~~dP~~R~t~~~~~a~eil  263 (364)
T d1omwa3         234 PELRSLLEGLLQRDVNRRLGCLGRGAQEVK  263 (364)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTTSSSTHHHHH
T ss_pred             HHHHHHHHHHcccCHHHhCCCcccCHHHHH
Confidence            56789999999999999999     46665

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=1.7e-14  Score=96.12  Aligned_cols=86  Identities=14%  Similarity=0.084  Sum_probs=56.8

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||...+..++.++||||+||++++|++|+.||....     ............. . ...            ......+.
T Consensus       172 pe~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~-----~~~~~~~i~~~~~-~-~~~------------~~~~~~s~  232 (321)
T d1tkia_         172 PEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET-----NQQIIENIMNAEY-T-FDE------------EAFKEISI  232 (321)
T ss_dssp             HHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHTCC-C-CCH------------HHHTTSCH
T ss_pred             chhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCC-C-CCh------------hhccCCCH
Confidence            455667778999999999999999999999986422     1111111111100 0 000            00112345


Q ss_pred             HHHHHhhhccCCCccCCCCHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+.+++.+|+..+|.+|||+.+++.
T Consensus       233 ~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         233 EAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhHCcCHHHHhc
Confidence            6789999999999999999999875

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=5.4e-15  Score=98.52  Aligned_cols=81  Identities=22%  Similarity=0.284  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.++.++.++||||+||++|||++|+.||....  ...+...+.   .+      .+....            ..+.
T Consensus       172 PE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~--~~~~~~~i~---~~------~~~~p~------------~~s~  228 (320)
T d1xjda_         172 PEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD--EEELFHSIR---MD------NPFYPR------------WLEK  228 (320)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHH---HC------CCCCCT------------TSCH
T ss_pred             HHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCC--HHHHHHHHH---cC------CCCCCc------------cCCH
Confidence            678888899999999999999999999999986321  111111111   11      011110            2345


Q ss_pred             HHHHHhhhccCCCccCCCCHH-HHH
Q 042057           81 SMVRIGVACSMESPQDRMNIT-NVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs~~-~v~  104 (127)
                      .+.+++.+||..+|.+||++. ++.
T Consensus       229 ~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         229 EAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHhcccCCCCCcCHHHHHH
Confidence            678999999999999999985 564

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.39  E-value=3.8e-14  Score=93.39  Aligned_cols=103  Identities=15%  Similarity=0.047  Sum_probs=57.4

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCC----cccc---ccccccccCCCCcchh
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPD----HVVY---IVDPILLNDGKGETRI   72 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---~~~~~~~~~~~~~~~~   72 (127)
                      ||.+..+ .++.++|||||||+++||++|..||....  .......+......    .+..   ..........+.....
T Consensus       169 PE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~--~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (299)
T d1ua2a_         169 PELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS--DLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLH  246 (299)
T ss_dssp             HHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSS--HHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHH
T ss_pred             HHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCC--HHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChH
Confidence            5666544 57999999999999999999998885321  11111111111100    0000   0000000000000000


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .........+.+++.+|+..+|.+|||+.+++.
T Consensus       247 ~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         247 HIFSAAGDDLLDLIQGLFLFNPCARITATQALK  279 (299)
T ss_dssp             HHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HhcccCCHHHHHHHHHHccCChhhCcCHHHHhC
Confidence            011123457889999999999999999999864

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=5.3e-14  Score=94.30  Aligned_cols=81  Identities=14%  Similarity=0.113  Sum_probs=56.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||+||+++||++|+.||....     ............      ....            ...+.
T Consensus       174 PE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~-----~~~~~~~i~~~~------~~~p------------~~~s~  230 (337)
T d1o6la_         174 PEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HERLFELILMEE------IRFP------------RTLSP  230 (337)
T ss_dssp             GGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC------CCCC------------TTSCH
T ss_pred             hhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcC-----HHHHHHHHhcCC------CCCC------------ccCCH
Confidence            788899999999999999999999999999986422     111111111110      0000            02334


Q ss_pred             HHHHHhhhccCCCccCCCC-----HHHHH
Q 042057           81 SMVRIGVACSMESPQDRMN-----ITNVV  104 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RPs-----~~~v~  104 (127)
                      .+.+++..||+.+|.+|++     +.+++
T Consensus       231 ~~~dli~~~L~~dP~~R~~~~~~~~~eil  259 (337)
T d1o6la_         231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVM  259 (337)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCSTTTHHHHH
T ss_pred             HHHHHHHhhccCCchhhcccccccHHHHH
Confidence            6688999999999999995     55554

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.37  E-value=5.3e-13  Score=89.80  Aligned_cols=100  Identities=15%  Similarity=0.101  Sum_probs=61.1

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCC---------------------cHHHHHHhhcCC---cccc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDL---------------------NLHRFARMALPD---HVVY   56 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~---~~~~   56 (127)
                      ||++.+..++.++||||+||+++||++|+.||........                     ............   ....
T Consensus       187 PE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (355)
T d2b1pa1         187 PEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK  266 (355)
T ss_dssp             HHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHH
T ss_pred             hhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccc
Confidence            6788888899999999999999999999999853211000                     000000000000   0000


Q ss_pred             ccccccccCCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           57 IVDPILLNDGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .......     .............+.+++.+|+..+|.+|||+.+++.
T Consensus       267 ~~~~~~~-----~~~~~~~~~~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         267 LFPDSLF-----PADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HSCGGGS-----CCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccccccc-----cccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            0000000     0112223345677899999999999999999999973

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.37  E-value=2.9e-14  Score=96.04  Aligned_cols=82  Identities=12%  Similarity=0.101  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||++.+..++.++||||+||++|||++|+.||....     ............      .....            ....
T Consensus       207 PE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~~i~~~~------~~~p~------------~~s~  263 (350)
T d1rdqe_         207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ-----PIQIYEKIVSGK------VRFPS------------HFSS  263 (350)
T ss_dssp             HHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCC------CCCCT------------TCCH
T ss_pred             HHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcC-----HHHHHHHHhcCC------CCCCc------------cCCH
Confidence            688888889999999999999999999999986321     111111111110      00000            2345


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++..||..+|.+|+     ++.+++.
T Consensus       264 ~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            678899999999999994     7888764

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.37  E-value=3.6e-14  Score=94.33  Aligned_cols=82  Identities=15%  Similarity=0.035  Sum_probs=56.6

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHH
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVN   80 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (127)
                      ||.+.+..++.++||||+||++|||++|+.||....     ............      ....            ...+.
T Consensus       170 PE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~~i~~~~------~~~p------------~~~s~  226 (316)
T d1fota_         170 PEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSN-----TMKTYEKILNAE------LRFP------------PFFNE  226 (316)
T ss_dssp             HHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS-----HHHHHHHHHHCC------CCCC------------TTSCH
T ss_pred             HHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcC-----HHHHHHHHHcCC------CCCC------------CCCCH
Confidence            788888889999999999999999999999986421     111111111110      0000            02334


Q ss_pred             HHHHHhhhccCCCccCCC-----CHHHHHH
Q 042057           81 SMVRIGVACSMESPQDRM-----NITNVVH  105 (127)
Q Consensus        81 ~~~~l~~~c~~~~p~~RP-----s~~~v~~  105 (127)
                      .+.+++.+|+..+|.+|+     ++.+++.
T Consensus       227 ~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         227 DVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            678899999999999996     7888763

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.36  E-value=1.8e-13  Score=89.38  Aligned_cols=80  Identities=14%  Similarity=0.161  Sum_probs=52.6

Q ss_pred             CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHh
Q 042057            7 SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIG   86 (127)
Q Consensus         7 ~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~   86 (127)
                      ..++.++||||+||+++||++|+.||....     ..........+.. ....+.             ....++.+.+++
T Consensus       190 ~~~~~~~DiwslGvilyeml~g~~Pf~~~~-----~~~~~~~i~~~~~-~~~~~~-------------~~~~s~~~~~li  250 (277)
T d1phka_         190 PGYGKEVDMWSTGVIMYTLLAGSPPFWHRK-----QMLMLRMIMSGNY-QFGSPE-------------WDDYSDTVKDLV  250 (277)
T ss_dssp             CCBCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHTCC-CCCTTT-------------GGGSCHHHHHHH
T ss_pred             CCCCchheEcccchhhhhhccCCCCCCCCC-----HHHHHHHHHhCCC-CCCCcc-------------cccCCHHHHHHH
Confidence            357889999999999999999999986422     1111111111110 000000             113445788999


Q ss_pred             hhccCCCccCCCCHHHHHH
Q 042057           87 VACSMESPQDRMNITNVVH  105 (127)
Q Consensus        87 ~~c~~~~p~~RPs~~~v~~  105 (127)
                      .+||..+|.+|||+.+++.
T Consensus       251 ~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         251 SRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHCCSSGGGSCCHHHHTT
T ss_pred             HHHccCChhHCcCHHHHHc
Confidence            9999999999999998753

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=3.6e-13  Score=89.27  Aligned_cols=103  Identities=12%  Similarity=0.066  Sum_probs=55.4

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC---Ccc-ccccccccccCCC----Ccch
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP---DHV-VYIVDPILLNDGK----GETR   71 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~----~~~~   71 (127)
                      ||.+.. ..++.++||||+||+++||++|+.||....  .......+.....   ... .............    ..+.
T Consensus       190 PE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (318)
T d3blha1         190 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT--EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRK  267 (318)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBC
T ss_pred             HHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC--HHHHHHHHHHhcCCCChhhccccchhhhhhhhccccccccc
Confidence            455544 368899999999999999999999986321  1111111111111   000 0000000000000    0000


Q ss_pred             hh---hHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           72 IN---SRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        72 ~~---~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ..   ........+.+++.+||..+|.+|||+.+++.
T Consensus       268 ~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         268 VKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             chhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHc
Confidence            00   00112345678999999999999999999874

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2e-13  Score=89.94  Aligned_cols=104  Identities=18%  Similarity=0.040  Sum_probs=56.1

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--Cc-ccccc-ccccccCCCC---cchh
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--DH-VVYIV-DPILLNDGKG---ETRI   72 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~-~~~~~~~~~~---~~~~   72 (127)
                      ||.+.. ..++.++||||+||++++|++|+.||....... .+.........  +. ..... .+......+.   ....
T Consensus       171 pE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (298)
T d1gz8a_         171 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFS  249 (298)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHH
T ss_pred             hhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHH-HHHHHHHhcCCCchhhccccccccccccccccccccchh
Confidence            343333 345889999999999999999999986432111 11111111111  00 00000 0000000000   0001


Q ss_pred             hhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           73 NSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        73 ~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .........+.+++.+|+..+|.+|||+.+++.
T Consensus       250 ~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~  282 (298)
T d1gz8a_         250 KVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA  282 (298)
T ss_dssp             HHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhccCCCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            111123456788999999999999999999864

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=2.1e-13  Score=89.23  Aligned_cols=104  Identities=15%  Similarity=0.081  Sum_probs=55.4

Q ss_pred             CcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--C-cc---ccccccccccCCCC-cchhh
Q 042057            2 EYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--D-HV---VYIVDPILLNDGKG-ETRIN   73 (127)
Q Consensus         2 E~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~---~~~~~~~~~~~~~~-~~~~~   73 (127)
                      |.+... .++.++||||+||+++||++|+.|+.........+.........  . ..   ....+.......+. .....
T Consensus       171 e~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (292)
T d1unla_         171 DVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVN  250 (292)
T ss_dssp             HHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTT
T ss_pred             hHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhh
Confidence            444444 46899999999999999999999975322111111111111111  0 00   00000000000000 00011


Q ss_pred             hHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           74 SRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        74 ~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      ........+.+++.+|+..+|.+|||+.+++.
T Consensus       251 ~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~  282 (292)
T d1unla_         251 VVPKLNATGRDLLQNLLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             TSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            11233456788999999999999999998864

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.7e-13  Score=89.62  Aligned_cols=78  Identities=21%  Similarity=0.233  Sum_probs=50.1

Q ss_pred             CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCccccccccccccCCCCcchhhhHHHHHHHHHHHhh
Q 042057            8 GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIVDPILLNDGKGETRINSRLACVNSMVRIGV   87 (127)
Q Consensus         8 ~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~   87 (127)
                      .++.++||||+||+++||++|+.||........ ............      +.+            +......+.+++.
T Consensus       208 ~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~-~~~i~~~~~~~~------~~~------------~~~~s~~~~~li~  268 (322)
T d1vzoa_         208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNS-QAEISRRILKSE------PPY------------PQEMSALAKDLIQ  268 (322)
T ss_dssp             --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCC-HHHHHHHHHHCC------CCC------------CTTSCHHHHHHHH
T ss_pred             CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcccCC------CCC------------cccCCHHHHHHHH
Confidence            467899999999999999999999875432221 112221111110      001            0134567788999


Q ss_pred             hccCCCccCCCC-----HHHHH
Q 042057           88 ACSMESPQDRMN-----ITNVV  104 (127)
Q Consensus        88 ~c~~~~p~~RPs-----~~~v~  104 (127)
                      +||..+|.+||+     +.+++
T Consensus       269 ~~l~~dP~~R~s~~~~t~~eil  290 (322)
T d1vzoa_         269 RLLMKDPKKRLGCGPRDADEIK  290 (322)
T ss_dssp             HHTCSSGGGSTTSSTTTHHHHH
T ss_pred             HHcccCHHHcCCCCcccHHHHH
Confidence            999999999995     56654

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.33  E-value=2.2e-13  Score=89.12  Aligned_cols=102  Identities=17%  Similarity=0.097  Sum_probs=55.9

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--C-cccccc-----ccccccCCCCcch
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--D-HVVYIV-----DPILLNDGKGETR   71 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~-----~~~~~~~~~~~~~   71 (127)
                      ||.+. ...++.++||||+||+++||++|+.||....... .+.........  . ......     ......... ...
T Consensus       169 pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  246 (286)
T d1ob3a_         169 PDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEP-LPW  246 (286)
T ss_dssp             HHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCC-CCG
T ss_pred             HHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHH-HHHHHHHhhCCCChhhccchhhhhhcccccccccC-cch
Confidence            34443 3457899999999999999999999986432111 11111111000  0 000000     000000000 000


Q ss_pred             hhhHHHHHHHHHHHhhhccCCCccCCCCHHHHH
Q 042057           72 INSRLACVNSMVRIGVACSMESPQDRMNITNVV  104 (127)
Q Consensus        72 ~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~  104 (127)
                      ..........+.+++..|+..||.+|||+.+++
T Consensus       247 ~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell  279 (286)
T d1ob3a_         247 ESFLKGLDESGIDLLSKMLKLDPNQRITAKQAL  279 (286)
T ss_dssp             GGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred             hhhcccCCHHHHHHHHHHccCChhHCcCHHHHh
Confidence            111112345778999999999999999999886

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=1.1e-12  Score=87.78  Aligned_cols=100  Identities=15%  Similarity=0.042  Sum_probs=56.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcC--Ccccccc-----------ccccccCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALP--DHVVYIV-----------DPILLNDG   66 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----------~~~~~~~~   66 (127)
                      ||.+.+ ..++.++||||+||++++|++|+.|+...... ..+.........  .......           .+......
T Consensus       187 PE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  265 (346)
T d1cm8a_         187 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHL-DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKD  265 (346)
T ss_dssp             THHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCC
T ss_pred             HHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChH-HHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccc
Confidence            666655 45689999999999999999999998643210 001010000000  0000000           00000000


Q ss_pred             CCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           67 KGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                          ...........+.+++..|+..+|.+|||+.+++.
T Consensus       266 ----~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~  300 (346)
T d1cm8a_         266 ----FASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA  300 (346)
T ss_dssp             ----GGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ----hHHhccCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                00001122346678999999999999999999975

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=6e-13  Score=89.39  Aligned_cols=100  Identities=14%  Similarity=0.013  Sum_probs=56.0

Q ss_pred             CCccc-CCCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHH-----------HhhcCCccccccccccccCCCC
Q 042057            1 VEYGL-GSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFA-----------RMALPDHVVYIVDPILLNDGKG   68 (127)
Q Consensus         1 pE~~~-~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~   68 (127)
                      ||.+. ...++.++||||+||+++||++|+.||...... ..+...+           ...... .....-+......  
T Consensus       191 PE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~-~~l~~i~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~--  266 (350)
T d1q5ka_         191 PELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQIREMNPN-YTEFKFPQIKAHP--  266 (350)
T ss_dssp             HHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCC----CCCCCCCCCCC--
T ss_pred             hHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHH-HHHHHHHHHhCCChHHhhhhhccc-hhhccccccccCc--
Confidence            34444 456899999999999999999999998643211 0111111           111110 0000000000000  


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ............+.+++.+|+..||.+|||+.+++.
T Consensus       267 -~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         267 -WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA  302 (350)
T ss_dssp             -GGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             -hhhhcccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000001123456788999999999999999999874

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.25  E-value=3.9e-12  Score=85.21  Aligned_cols=102  Identities=15%  Similarity=0.036  Sum_probs=55.8

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCcccccc---------c--cccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDHVVYIV---------D--PILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~~~~~   68 (127)
                      ||.+.. ..++.++||||+||+++||++|+.||.......  .................         .  .........
T Consensus       181 PE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (345)
T d1pmea_         181 PEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD--QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKV  258 (345)
T ss_dssp             GGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCC
T ss_pred             HHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHH--HHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCC
Confidence            676644 456889999999999999999999986432110  00000000000000000         0  000000000


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                       ............+.+++..|+..||.+|||+.+++.
T Consensus       259 -~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~  294 (345)
T d1pmea_         259 -PWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA  294 (345)
T ss_dssp             -CHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             -CHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence             000000012346788999999999999999999875

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.25  E-value=1e-12  Score=88.23  Aligned_cols=105  Identities=10%  Similarity=0.061  Sum_probs=58.4

Q ss_pred             CCcccCCCCCCcccchhhhHHHHHHHcCCCCCCccccCC-C----cHHHHHHhhc-----------------CC-ccccc
Q 042057            1 VEYGLGSGVSTNGDVYSYGILLLEMETTKKPTDVMFEGD-L----NLHRFARMAL-----------------PD-HVVYI   57 (127)
Q Consensus         1 pE~~~~~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~-~----~~~~~~~~~~-----------------~~-~~~~~   57 (127)
                      ||.+..+.++.++||||+||++++|++|+.||....... .    .+...+....                 .. .....
T Consensus       198 PE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~  277 (362)
T d1q8ya_         198 PEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRN  277 (362)
T ss_dssp             HHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSS
T ss_pred             hhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhc
Confidence            577777889999999999999999999999986432111 0    0111111100                 00 00000


Q ss_pred             cccccccCCCC--cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           58 VDPILLNDGKG--ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        58 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      +..........  .............+.+++.+|+..||.+|||+.+++.
T Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         278 ISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             CCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             cccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            00000000000  0001112356778899999999999999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.20  E-value=3.2e-12  Score=84.94  Aligned_cols=105  Identities=11%  Similarity=-0.029  Sum_probs=56.8

Q ss_pred             CCcccCC-CCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHH------------HHHHhhcCC---cccccccccccc
Q 042057            1 VEYGLGS-GVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLH------------RFARMALPD---HVVYIVDPILLN   64 (127)
Q Consensus         1 pE~~~~~-~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~---~~~~~~~~~~~~   64 (127)
                      ||.+... .++.++||||+||+++|+++|+.|+...........            .+.......   ............
T Consensus       198 PE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (328)
T d3bqca1         198 PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK  277 (328)
T ss_dssp             HHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCC
T ss_pred             cccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhccccccc
Confidence            4555444 479999999999999999999999864321111000            011000000   000000000000


Q ss_pred             CCCCcchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           65 DGKGETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        65 ~~~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .................+.+++.+|+..+|.+|||+.++++
T Consensus       278 ~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         278 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             CGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            00000000111133456789999999999999999999864

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.1e-11  Score=82.79  Aligned_cols=102  Identities=11%  Similarity=0.026  Sum_probs=55.0

Q ss_pred             CCcccC-CCCCCcccchhhhHHHHHHHcCCCCCCccccCCCcHHHHHHhhcCCc---ccccc--------ccccccCCCC
Q 042057            1 VEYGLG-SGVSTNGDVYSYGILLLEMETTKKPTDVMFEGDLNLHRFARMALPDH---VVYIV--------DPILLNDGKG   68 (127)
Q Consensus         1 pE~~~~-~~~s~~~Dv~sfGi~l~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~~   68 (127)
                      ||.... ..++.++||||+||++++|++|+.||....  .......+.......   .....        ...+... +.
T Consensus       187 pE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  263 (348)
T d2gfsa1         187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD--HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQM-PK  263 (348)
T ss_dssp             HHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS--HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCC-CC
T ss_pred             chhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC--HHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccC-CC
Confidence            344333 456889999999999999999999986321  111111111000000   00000        0000000 00


Q ss_pred             cchhhhHHHHHHHHHHHhhhccCCCccCCCCHHHHHH
Q 042057           69 ETRINSRLACVNSMVRIGVACSMESPQDRMNITNVVH  105 (127)
Q Consensus        69 ~~~~~~~~~~~~~~~~l~~~c~~~~p~~RPs~~~v~~  105 (127)
                      .............+.+++.+|+..+|.+|||+.+++.
T Consensus       264 ~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         264 MNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA  300 (348)
T ss_dssp             CCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cchhhhcCCCCHHHHHHHHHHCcCChhhCcCHHHHhc
Confidence            0000000123456788999999999999999999875