Citrus Sinensis ID: 042063

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-----
MAASYSVPSMILEEEGRFEAEVAEVQAWWNSERFRLTRRPYSARDVVALRGSLRQSYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAYVERIQREERNNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQFKETWTRPGATNINNGSTVVAKARM
cccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccEEccccccHHHHHHHHHcccEEEEcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHccccccccccEEEEcccccccHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHcccccccccccHHHHcccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHccccHHHcccccccccccccccccccccccccccEEEEEccc
****************RFEAEVAEVQAWWNSERFRLTRRPYSARDVVALRGSLRQSYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQR***********ARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAYVERIQREERNNGVDTLAHQKWSGANYYDKYLKTVQ*************************************AKA**
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MAASYSVPSMILEEEGRFEAEVAEVQAWWNSERFRLTRRPYSARDVVALRGSLRQSYGSNEMAKKLWRTLKTHQANGTASRTFGALDPVQVTMMAKHLDSIYVSGWQCSSTHTSTNEPGPDLADYPYDTVPNKVEHLFFAQQYHDRKQREARMSMSREERARTPCVDYLKPIIADGDTGFGGTTATVKLCKLFVERGAAGVHIEDQSSVTKKCGHMAGKVLVAISEHINRLVAARLQFDVMGVETVLVARTDAEAATLIQTNVDTRDHQFILGVTNPNLRGKALASILAEAMAAGKTGAELQAIEDNWIAMAGLKTFSECVIDAVNNLNTGEHEKRRRLNEWMNLSSYDKCLSSEQCREIAERLGLKNLFWDWDLPRTREGFYRFKGSVDAAIIRGWAFAPHADLIWMETASPDLAECTKFAGGIKSKHPEIMLAYNLSPSFNWDASGMTDEEMKDFIPRIAKLGFCWQFITLAGFHADALVVDTFAKDYARRGMLAYVERIQREERNNGVDTLAHQKWSGANYYDKYLKTVQGGISSTAAMGKGVTEDQFKETWTRPGATNINNGSTVVAKARM

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Isocitrate lyase 1 (Fragment) Involved in storage lipid mobilization during the growth of higher plant seedling.confidentP45456
Isocitrate lyase 2 (Fragment) Involved in storage lipid mobilization during the growth of higher plant seedling.confidentP45457
Isocitrate lyase Involved in storage lipid mobilization during the growth of higher plant seedling.confidentP28297

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
4.-.-.-Lyases.probable
4.1.-.-Carbon-carbon lyases.probable
4.1.3.-Oxo-acid-lyases.probable
4.1.3.1Transferred entry: 4.1.3.16.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3LG3, chain A
Confidence level:very confident
Coverage over the Query: 18-273,376-535
View the alignment between query and template
View the model in PyMOL
Template: 1DQU, chain A
Confidence level:very confident
Coverage over the Query: 11-535
View the alignment between query and template
View the model in PyMOL