Citrus Sinensis ID: 042066

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
cHHHHHHHHHHHHHccccEEEEEccccCECHHHHHHHHccCEEEEEEEEEEEcccEEEEEEccEEcccEEEEEEcccccccccccccccccccEEEccccccccccccccccccccccccHHHHHHccccccccccccccccEEEEc
*HQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSV***SQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
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DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable beta-1,4-xylosyltransferase IRX9 Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.probableQ9ZQC6

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2D0J, chain A
Confidence level:very confident
Coverage over the Query: 2-140
View the alignment between query and template
View the model in PyMOL