Citrus Sinensis ID: 042066

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------
Protein Sequence
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHccccEEEEEccccEEEHHHHHHHHccEEEEEEEEEEEEcccEEEEEEccEEcccEEEEEEcccccccccccccccccccEEEcccccccccccccccccccccccHHHHHHHccccccccccccccccEEEEc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHcEEcEEEEEEEcccccEEEEEccEEcccEEEEEEcccccccccccccccEEEEEEEHHHHccccHccccccccccccccccEEEEEEcccccEEEEcccccEEEEEc
Coil and Loop (DISEMBL)
DHQRNVALKHIEHHRLSGIVHFagvsnvydlaffdelrdievygAWPVALLSANKQkviiegpvcdssqvIGWHLKklnnetdakppihvssfafnssilwdperwgrpssvqqtsqvktpYLLRMFGYecfsntlgnhqtnkvfiv
Flexible Loop (DISEMBL)
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFsntlgnhqtnkvfiv
Low Complexity Region (SEG)
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
Disordered region (IsUnstruct)
******ALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGR*******SQVKTPYLLRMFGYECFSNTLGNHQTNKVF**
Disordered Region (DISOPRED)
*HQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSV****QVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
Disordered Region (DISEMBL)
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERW*********SQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
Disordered Region (DISPRO)
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGYECFSNTLGNHQTNKVFIV
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	147	2.2.26 [Sep-21-2011]
Q9ZQC6	351	Probable beta-1,4-xylosyl	yes	no	0.836	0.350	0.731	5e-55
Q75L84	371	Probable glucuronosyltran	yes	no	0.782	0.309	0.529	2e-36
Q10N05	415	Probable glucuronosyltran	no	no	0.789	0.279	0.534	1e-33
Q9SXC4	394	Probable beta-1,4-xylosyl	no	no	0.782	0.291	0.545	1e-30
Q5QM25	446	Probable glucuronosyltran	no	no	0.727	0.239	0.481	1e-25
Q8S626	351	Probable glucuronosyltran	no	no	0.707	0.296	0.523	2e-25
Q6Z3Y6	338	Probable glucuronosyltran	no	no	0.857	0.372	0.426	7e-25
Q6AT32	451	Probable glucuronosyltran	no	no	0.727	0.237	0.458	7e-25
Q5ZCC5	549	Probable glucuronosyltran	no	no	0.734	0.196	0.362	4e-22
Q7XTB2	381	Probable glucuronosyltran	no	no	0.693	0.267	0.417	9e-19

>sp|Q9ZQC6|IRX9_ARATH Probable beta-1,4-xylosyltransferase IRX9 OS=Arabidopsis thaliana GN=IRX9 PE=2 SV=1

 Score =  213 bits (541), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 113/123 (91%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRN+AL+HIEHH+LSGIVHFAG++N+YDL FF ++RDIEV+G WP+ALLSAN+++V++
Sbjct: 192 DHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFVKIRDIEVFGTWPMALLSANRKRVVV 251

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKT 120
           EGPVC+SSQV+GWHL+K+NNET+ KPPIH+SSFAFNSSILWDPERWGRPSSV+ T Q   
Sbjct: 252 EGPVCESSQVLGWHLRKINNETETKPPIHISSFAFNSSILWDPERWGRPSSVEGTKQDSI 311

Query: 121 PYL 123
            Y+
Sbjct: 312 KYV 314

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 4EC: .EC: 2EC: .EC: -

>sp|Q75L84|GT51_ORYSJ Probable glucuronosyltransferase Os05g0123100 OS=Oryza sativa subsp. japonica GN=Os05g0123100 PE=2 SV=1

 Score =  150 bits (379), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 71/134 (52%), Positives = 88/134 (65%), Gaps = 19/134 (14%)

Query: 3   QRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEG 62
           QRN AL H+E HRLSG+VHFA  + VYD  FFDE+R IE +G WPVA +SA ++KV++EG
Sbjct: 187 QRNAALAHVEKHRLSGVVHFADAAGVYDAHFFDEIRQIEAFGTWPVATMSAGEKKVVVEG 246

Query: 63  PVCDSSQVIGWHLKKLNN----------ETDAKPP---------IHVSSFAFNSSILWDP 103
           P+C  S+V+GW  +  N+          E D  P          I VS FAFNSSILWDP
Sbjct: 247 PLCSDSKVVGWFSRDFNDGTTRAVTYNTEADLNPAGAAGTRAHTIDVSGFAFNSSILWDP 306

Query: 104 ERWGRPSSVQQTSQ 117
           ERWGRP+S+  TSQ
Sbjct: 307 ERWGRPTSLPDTSQ 320

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q10N05|GT32_ORYSJ Probable glucuronosyltransferase Os03g0287800 OS=Oryza sativa subsp. japonica GN=Os03g0287800 PE=3 SV=1

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 70/131 (53%), Positives = 88/131 (67%), Gaps = 15/131 (11%)

Query: 2   HQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIE 61
           HQRNVAL HIEHHRL+G+V FAG+ + +DL FFD+LR I  +GAWPVA +S N++KV+++
Sbjct: 179 HQRNVALGHIEHHRLAGVVLFAGLGDTFDLRFFDQLRQIRTFGAWPVATMSQNERKVVVQ 238

Query: 62  GPVCDSSQVIGWHLKKLNNETD-------------AKP-PIHVSSFAFNSSILWDPERWG 107
           GP C SS V GW    L+N T              A+P  + V  FAFNSS+LWDPERWG
Sbjct: 239 GPACSSSSVAGWFSMDLSNATSPVAVGGAGYGAAAARPRELDVHGFAFNSSVLWDPERWG 298

Query: 108 R-PSSVQQTSQ 117
           R P+S    SQ
Sbjct: 299 RYPTSEPDKSQ 309

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q9SXC4|IRX9H_ARATH Probable beta-1,4-xylosyltransferase IRX9H OS=Arabidopsis thaliana GN=IRX9H PE=1 SV=2

 Score =  131 bits (330), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 66/121 (54%), Positives = 81/121 (66%), Gaps = 6/121 (4%)

Query: 2   HQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIE 61
           HQRN AL+HIE H+L GIV+FA   N+Y L  F  LR I  +G WPVA+L+ +K K I+E
Sbjct: 216 HQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQISRFGTWPVAMLAQSKNKAILE 275

Query: 62  GPVCDSSQVIGWHLKKLNNETDAKPPIHV--SSFAFNSSILWDPERWGRPSSVQQTSQVK 119
           GPVC+ SQVIGWH    N ++      HV  S FAFNS+ILWDP+RW RP S   T Q+ 
Sbjct: 276 GPVCNGSQVIGWH---TNEKSKRLRRFHVDMSGFAFNSTILWDPKRWRRPFS-HPTRQLD 331

Query: 120 T 120
           T
Sbjct: 332 T 332

Involved in the synthesis of the hemicellulose glucuronoxylan, a major component of secondary cell walls. Probably involved in the elongation of glucuronoxylan xylosyl backbone.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 4

EC: .

EC: 2

EC: .

EC: -

>sp|Q5QM25|GT12_ORYSJ Probable glucuronosyltransferase Os01g0675500 OS=Oryza sativa subsp. japonica GN=Os01g0675500 PE=2 SV=1

 Score =  114 bits (286), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 1/108 (0%)

Query: 3   QRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEG 62
           Q+N A+ HI+ HRL GIVHFA     Y    F+E+R I  +G WPVA+    K +V++EG
Sbjct: 269 QKNNAIFHIKKHRLDGIVHFADEERAYSADLFEEMRKIRRFGTWPVAIHVGTKYRVVLEG 328

Query: 63  PVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPS 110
           PVC  +QV GWH  +       + PI  S FAFNS+ILWDP+RW  P+
Sbjct: 329 PVCKGNQVTGWHTNQRRG-VSRRFPIGFSGFAFNSTILWDPQRWNSPT 375

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q8S626|GT102_ORYSJ Probable glucuronosyltransferase Os10g0205300 OS=Oryza sativa subsp. japonica GN=Os10g0205300 PE=2 SV=1

 Score =  114 bits (285), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 55/105 (52%), Positives = 69/105 (65%), Gaps = 1/105 (0%)

Query: 3   QRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEG 62
           QRN AL HIEHHRL GIV+FA   NVY L  F  LRDI  +G WPVA L+  K K I++G
Sbjct: 167 QRNTALDHIEHHRLHGIVYFADEDNVYSLDLFYHLRDIRSFGTWPVATLAPGKSKTILQG 226

Query: 63  PVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWG 107
           PVC+ S+V+GWH     ++   +  + +S FAFNSS LWD +  G
Sbjct: 227 PVCEGSRVVGWHTTD-RSKNQRRFHVDMSGFAFNSSKLWDAKNRG 270

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q6Z3Y6|GT71_ORYSJ Probable glucuronosyltransferase Os07g0694400 OS=Oryza sativa subsp. japonica GN=Os07g0694400 PE=2 SV=1

 Score =  112 bits (281), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 61/143 (42%), Positives = 86/143 (60%), Gaps = 17/143 (11%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           + QRNVAL+HIE HR++G+V F G++++YDL     LRDI  +GAWPVA +SA ++KV++
Sbjct: 166 EQQRNVALRHIEDHRIAGVVLFGGLADIYDLRLLHHLRDIRTFGAWPVATVSAYERKVMV 225

Query: 61  EGPVC---DSSQVI--GWHLKKLN--------NETDAKPP---IHVSSFAFNSSILWDPE 104
           +GP+C    SS VI  GW    ++           D  PP   + V  FAF+S +LWDP 
Sbjct: 226 QGPLCINTSSSSVITRGWFDMDMDMAAGGERRAAADRPPPETLMEVGGFAFSSWMLWDPH 285

Query: 105 RWGR-PSSVQQTSQVKTPYLLRM 126
           RW R P S    SQ    ++ R+
Sbjct: 286 RWDRFPLSDPDASQESVKFVQRV 308

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q6AT32|GT52_ORYSJ Probable glucuronosyltransferase Os05g0559600 OS=Oryza sativa subsp. japonica GN=Os05g0559600 PE=2 SV=1

 Score =  112 bits (280), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 50/109 (45%), Positives = 74/109 (67%), Gaps = 2/109 (1%)

Query: 3   QRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEG 62
           QRN A+ HI+ HRL GI+HFA     Y    F+E+R I  +GAWPVA+ +  K +V++EG
Sbjct: 271 QRNTAIYHIKKHRLDGIMHFADEERSYMSDVFEEMRKIRRFGAWPVAIHTGIKYRVVLEG 330

Query: 63  PVCDSSQVIGWH-LKKLNNETDAKP-PIHVSSFAFNSSILWDPERWGRP 109
           P+C  ++V GW+ ++ +  ++  +  P+  S FAFNS++LWDPERW RP
Sbjct: 331 PICKGNRVTGWNTIQNIQKKSAVRRFPVGFSGFAFNSTMLWDPERWNRP 379

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q5ZCC5|GT11_ORYSJ Probable glucuronosyltransferase Os01g0157700 OS=Oryza sativa subsp. japonica GN=Os01g0157700 PE=3 SV=1

 Score =  103 bits (257), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 54/149 (36%), Positives = 73/149 (48%), Gaps = 41/149 (27%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           D+Q NVAL HI+ HRL G+VHFA  S+VYDL FF +LR      AWP+A +S+  Q V +
Sbjct: 149 DYQMNVALSHIQLHRLPGVVHFAAASSVYDLRFFQQLRQTRGIAAWPIATVSSADQTVKL 208

Query: 61  EGPVCDSSQVIGWHLKKLN----------------------------------------- 79
           EGP C+SSQ+ GW+ K  +                                         
Sbjct: 209 EGPTCNSSQITGWYSKDSSSNITETTWDSSSNTTQTTWDSSSNKTQTTTLAALDTNASKQ 268

Query: 80  NETDAKPPIHVSSFAFNSSILWDPERWGR 108
           N +   P I++ +  F SS+LWD ER+ R
Sbjct: 269 NSSSGPPEINMHAVGFKSSMLWDSERFTR 297

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

>sp|Q7XTB2|GT41_ORYSJ Probable glucuronosyltransferase Os04g0103100 OS=Oryza sativa subsp. japonica GN=Os04g0103100 PE=2 SV=2

 Score = 92.4 bits (228), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 1/103 (0%)

Query: 2   HQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIE 61
           HQ N AL  +++HRL G+++FA    VY L  F  LR I  +  WPV  +S +  +V+++
Sbjct: 203 HQINAALDIVDNHRLDGVLYFADEEGVYSLHLFHHLRQIRRFATWPVPEISQHTNEVVLQ 262

Query: 62  GPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPE 104
           GPVC   QV+GWH     N+   +  + +S FAFNS++LWDP+
Sbjct: 263 GPVCKQGQVVGWHTTHDGNKLR-RFHLAMSGFAFNSTMLWDPK 304

Involved in the synthesis of glucuronoxylan hemicellulose in secondary cell walls.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 2

EC: .

EC: 4

EC: .

EC: -

EC: .

EC: -

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
63087726	363	glycosyltransferase [Populus balsamifera	0.795	0.322	0.880	9e-58
224069352	359	glycosyl transferase [Populus trichocarp	0.795	0.325	0.880	1e-57
60657594	359	secondary cell wall-related glycosyltran	0.795	0.325	0.880	1e-57
224140167	357	glycosyl transferase [Populus trichocarp	0.795	0.327	0.854	5e-57
60657596	356	secondary cell wall-related glycosyltran	0.795	0.328	0.854	6e-57
145408198	356	secondary wall-associated glycosyltransf	0.795	0.328	0.846	4e-56
297827213	351	hypothetical protein ARALYDRAFT_902844 [	0.836	0.350	0.747	1e-54
255568400	369	beta-1,3-glucuronyltransferase, putative	0.795	0.317	0.831	3e-54
15228084	351	nucleotide-diphospho-sugar transferases-	0.836	0.350	0.731	3e-53
449440075	339	PREDICTED: probable beta-1,4-xylosyltran	0.795	0.345	0.803	2e-52

>gi|63087726|emb|CAI93178.1| glycosyltransferase [Populus balsamifera]

 Score =  228 bits (580), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 103/117 (88%), Positives = 109/117 (93%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+HIE HRLSGIVHFAG+SNVYDL FFDELR IEV+G WPVALLSANK KV I
Sbjct: 189 DHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEVFGTWPVALLSANKNKVTI 248

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHLKK+NNETD +PPIH+SSF FNSSILWDPERWGRPSSVQQTSQ
Sbjct: 249 EGPVCDSSQVIGWHLKKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQ 305

Source: Populus balsamifera

Species: Populus balsamifera

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224069352|ref|XP_002326337.1| glycosyl transferase [Populus trichocarpa] gi|222833530|gb|EEE72007.1| glycosyl transferase [Populus trichocarpa] gi|333951811|gb|AEG25423.1| glycosyltransferase GT43A [Populus trichocarpa]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/117 (88%), Positives = 109/117 (93%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+HIE HRLSGIVHFAG+SNVYDL FFDELR IEV+G WPVALLSANK KV I
Sbjct: 185 DHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEVFGTWPVALLSANKNKVTI 244

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHLKK+NNETD +PPIH+SSF FNSSILWDPERWGRPSSVQQTSQ
Sbjct: 245 EGPVCDSSQVIGWHLKKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQ 301

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60657594|gb|AAX33318.1| secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 103/117 (88%), Positives = 109/117 (93%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+HIE HRLSGIVHFAG+SNVYDL FFDELR IEV+G WPVALLSANK KV I
Sbjct: 185 DHQRNVALRHIEQHRLSGIVHFAGLSNVYDLGFFDELRQIEVFGTWPVALLSANKNKVTI 244

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHLKK+NNETD +PPIH+SSF FNSSILWDPERWGRPSSVQQTSQ
Sbjct: 245 EGPVCDSSQVIGWHLKKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQ 301

Source: Populus tremula x Populus tremuloides

Species: Populus tremula x Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140167|ref|XP_002323456.1| glycosyl transferase [Populus trichocarpa] gi|222868086|gb|EEF05217.1| glycosyl transferase [Populus trichocarpa] gi|333951813|gb|AEG25424.1| glycosyltransferase GT43B [Populus trichocarpa]

 Score =  225 bits (573), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 100/117 (85%), Positives = 111/117 (94%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+HIE HRLSGIVHFAG+SNVYDL FFDE+R IEV+G WP+ALLSAN++KVII
Sbjct: 189 DHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEVFGTWPMALLSANEKKVII 248

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHL+K+NNETD +PPIH+SSF FNSSILWDPERWGRPSSVQQTSQ
Sbjct: 249 EGPVCDSSQVIGWHLRKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQ 305

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|60657596|gb|AAX33319.1| secondary cell wall-related glycosyltransferase family 43 [Populus tremula x Populus tremuloides]

 Score =  225 bits (573), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 100/117 (85%), Positives = 111/117 (94%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+HIE HRLSGIVHFAG+SNVYDL FFDE+R IEV+G WP+ALLSAN++KVII
Sbjct: 188 DHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEVFGTWPMALLSANEKKVII 247

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHL+K+NNETD +PPIH+SSF FNSSILWDPERWGRPSSVQQTSQ
Sbjct: 248 EGPVCDSSQVIGWHLRKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQ 304

Source: Populus tremula x Populus tremuloides

Species: Populus tremula x Populus tremuloides

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|145408198|gb|ABP65661.1| secondary wall-associated glycosyltransferase family 43B [Populus tremula x Populus alba]

 Score =  222 bits (566), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 99/117 (84%), Positives = 110/117 (94%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+HIE HRLSGIVHFAG+SNVYDL FFDE+R IEV+G WP+ALLSAN++KVI 
Sbjct: 188 DHQRNVALRHIEKHRLSGIVHFAGLSNVYDLGFFDEIRQIEVFGTWPMALLSANEKKVIS 247

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHL+K+NNETD +PPIH+SSF FNSSILWDPERWGRPSSVQQTSQ
Sbjct: 248 EGPVCDSSQVIGWHLRKMNNETDKRPPIHISSFGFNSSILWDPERWGRPSSVQQTSQ 304

Source: Populus tremula x Populus alba

Species: Populus tremula x Populus alba

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297827213|ref|XP_002881489.1| hypothetical protein ARALYDRAFT_902844 [Arabidopsis lyrata subsp. lyrata] gi|297327328|gb|EFH57748.1| hypothetical protein ARALYDRAFT_902844 [Arabidopsis lyrata subsp. lyrata]

 Score =  217 bits (552), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 92/123 (74%), Positives = 114/123 (92%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRN+AL+HIEHH+LSGIVHFAG++N+YDL FFD++RDIEV+G WP+ALLSAN+++VI+
Sbjct: 192 DHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFDKIRDIEVFGTWPMALLSANRKRVIV 251

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKT 120
           EGPVC+SSQV+GWHL+K+NNET+ KPPIH+SSFAFNSSILWDPERWGRPSSV+ T Q   
Sbjct: 252 EGPVCESSQVLGWHLRKINNETETKPPIHISSFAFNSSILWDPERWGRPSSVEGTKQDSI 311

Query: 121 PYL 123
            Y+
Sbjct: 312 KYV 314

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255568400|ref|XP_002525174.1| beta-1,3-glucuronyltransferase, putative [Ricinus communis] gi|223535471|gb|EEF37140.1| beta-1,3-glucuronyltransferase, putative [Ricinus communis]

 Score =  216 bits (549), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 99/119 (83%), Positives = 109/119 (91%), Gaps = 2/119 (1%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRNVAL+H+E HRLSGIVHFA +SNVYDLAFFDELRDIE +G WP+ALLS NK KVII
Sbjct: 189 DHQRNVALRHLEQHRLSGIVHFASLSNVYDLAFFDELRDIEGFGTWPMALLSPNKNKVII 248

Query: 61  EGPVCDSSQVIGWHLKKL--NNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGP+CDSSQVIGWHLKK+  NN+TDA+PPIH+SSFAFNSSILWDPERWGRPSSV  TSQ
Sbjct: 249 EGPICDSSQVIGWHLKKMNNNNQTDARPPIHISSFAFNSSILWDPERWGRPSSVPHTSQ 307

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15228084|ref|NP_181246.1| nucleotide-diphospho-sugar transferases-like protein [Arabidopsis thaliana] gi|75216209|sp|Q9ZQC6.1|IRX9_ARATH RecName: Full=Probable beta-1,4-xylosyltransferase IRX9; AltName: Full=Protein IRREGULAR XYLEM 9; AltName: Full=Xylan xylosyltransferase IRX9 gi|4371292|gb|AAD18150.1| unknown protein [Arabidopsis thaliana] gi|50253428|gb|AAT71916.1| At2g37090 [Arabidopsis thaliana] gi|53828583|gb|AAU94401.1| At2g37090 [Arabidopsis thaliana] gi|330254256|gb|AEC09350.1| nucleotide-diphospho-sugar transferases-like protein [Arabidopsis thaliana]

 Score =  213 bits (541), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 90/123 (73%), Positives = 113/123 (91%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRN+AL+HIEHH+LSGIVHFAG++N+YDL FF ++RDIEV+G WP+ALLSAN+++V++
Sbjct: 192 DHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFVKIRDIEVFGTWPMALLSANRKRVVV 251

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKT 120
           EGPVC+SSQV+GWHL+K+NNET+ KPPIH+SSFAFNSSILWDPERWGRPSSV+ T Q   
Sbjct: 252 EGPVCESSQVLGWHLRKINNETETKPPIHISSFAFNSSILWDPERWGRPSSVEGTKQDSI 311

Query: 121 PYL 123
            Y+
Sbjct: 312 KYV 314

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449440075|ref|XP_004137810.1| PREDICTED: probable beta-1,4-xylosyltransferase IRX9-like [Cucumis sativus]

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 94/117 (80%), Positives = 107/117 (91%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           +HQRNVALKHIEHHRLSGIVHFAG+SN YDL FF ELR+IEV+G WP+AL++ANK+KV+I
Sbjct: 162 NHQRNVALKHIEHHRLSGIVHFAGLSNFYDLRFFHELREIEVFGTWPMALVTANKKKVVI 221

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGP+CDSSQVIGWHLKK+ N+T  KP IH+SSFAFNSSILWDPERWGR SSVQ TSQ
Sbjct: 222 EGPICDSSQVIGWHLKKMANQTQPKPQIHISSFAFNSSILWDPERWGRTSSVQDTSQ 278

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	147
TAIR|locus:2061748	351	IRX9 "IRREGULAR XYLEM 9" [Arab	0.836	0.350	0.731	1.5e-51
TAIR|locus:2196899	394	IRX9-L "AT1G27600" [Arabidopsi	0.795	0.296	0.529	3.8e-30
ZFIN|ZDB-GENE-040801-191	316	b3gat2 "beta-1,3-glucuronyltra	0.748	0.348	0.32	4e-08
TAIR|locus:2155533	492	IRX14-L "IRREGULAR XYLEM 14-LI	0.312	0.093	0.369	3.1e-07
FB|FBgn0036144	479	GlcAT-P "GlcAT-P" [Drosophila	0.612	0.187	0.257	5e-07
WB|WBGene00005026	356	sqv-8 [Caenorhabditis elegans	0.612	0.252	0.320	4.7e-06
TAIR|locus:2115090	525	IRX14 "irregular xylem 14" [Ar	0.367	0.102	0.321	1e-05
UNIPROTKB|Q9NPZ5	323	B3GAT2 "Galactosylgalactosylxy	0.918	0.417	0.264	1.1e-05
UNIPROTKB|Q5CAZ6	329	B3GAT2 "Galactosylgalactosylxy	0.918	0.410	0.264	1.1e-05
UNIPROTKB|F1MFX3	326	B3GAT2 "Uncharacterized protei	0.918	0.414	0.264	1.8e-05

TAIR|locus:2061748 IRX9 "IRREGULAR XYLEM 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
 Identities = 90/123 (73%), Positives = 113/123 (91%)

Query:     1 DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
             DHQRN+AL+HIEHH+LSGIVHFAG++N+YDL FF ++RDIEV+G WP+ALLSAN+++V++
Sbjct:   192 DHQRNLALRHIEHHKLSGIVHFAGLNNIYDLDFFVKIRDIEVFGTWPMALLSANRKRVVV 251

Query:    61 EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKT 120
             EGPVC+SSQV+GWHL+K+NNET+ KPPIH+SSFAFNSSILWDPERWGRPSSV+ T Q   
Sbjct:   252 EGPVCESSQVLGWHLRKINNETETKPPIHISSFAFNSSILWDPERWGRPSSVEGTKQDSI 311

Query:   121 PYL 123
              Y+
Sbjct:   312 KYV 314

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IGI

GO:0010413 "glucuronoxylan metabolic process" evidence=RCA;IMP

GO:0042285 "xylosyltransferase activity" evidence=IMP

GO:0009832 "plant-type cell wall biogenesis" evidence=RCA

GO:0042546 "cell wall biogenesis" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

GO:0045492 "xylan biosynthetic process" evidence=RCA

TAIR|locus:2196899 IRX9-L "AT1G27600" [Arabidopsis thaliana (taxid:3702)]

 Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
 Identities = 63/119 (52%), Positives = 81/119 (68%)

Query:     2 HQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIE 61
             HQRN AL+HIE H+L GIV+FA   N+Y L  F  LR I  +G WPVA+L+ +K K I+E
Sbjct:   216 HQRNTALEHIELHKLDGIVYFADDDNIYSLELFQSLRQISRFGTWPVAMLAQSKNKAILE 275

Query:    62 GPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKT 120
             GPVC+ SQVIGWH  + +     +  + +S FAFNS+ILWDP+RW RP S   T Q+ T
Sbjct:   276 GPVCNGSQVIGWHTNEKSKRL-RRFHVDMSGFAFNSTILWDPKRWRRPFS-HPTRQLDT 332

GO:0006486 "protein glycosylation" evidence=ISS

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0009834 "secondary cell wall biogenesis" evidence=IMP

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP

GO:0042285 "xylosyltransferase activity" evidence=IMP

GO:0010584 "pollen exine formation" evidence=IMP

ZFIN|ZDB-GENE-040801-191 b3gat2 "beta-1,3-glucuronyltransferase 2 (glucuronosyltransferase S)" [Danio rerio (taxid:7955)]

 Score = 131 (51.2 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 40/125 (32%), Positives = 60/125 (48%)

Query:     3 QRNVALKHIEHHRLS---GIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVI 59
             QRN+AL  I  HR S   G+V FA   N Y L  F+E+R       WPV L+   +    
Sbjct:   154 QRNLALGWIRGHRGSKDKGVVFFADDDNTYSLELFEEMRSTRRVSVWPVGLVGGRRY--- 210

Query:    60 IEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSS-ILWDP----ERWGRPSSVQQ 114
              E P+ +  +V+GW+      + D    I ++ FA N   IL +P    +R G    +Q+
Sbjct:   211 -ERPLVEKGKVVGWYT---GWKADRPFAIDMAGFAVNLQVILSNPRALFKRRGAKPGMQE 266

Query:   115 TSQVK 119
             +  +K
Sbjct:   267 SDFLK 271

GO:0016020 "membrane" evidence=IEA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

TAIR|locus:2155533 IRX14-L "IRREGULAR XYLEM 14-LIKE" [Arabidopsis thaliana (taxid:3702)]

 Score = 88 (36.0 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
 Identities = 17/46 (36%), Positives = 30/46 (65%)

Query:     7 ALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLS 52
             AL+ +   +L GIV FA  SN++ +  FDE++ ++ +GA  V +L+
Sbjct:   236 ALRVVREKKLDGIVMFADDSNMHSMELFDEIQTVKWFGALSVGILA 281

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP

GO:0042285 "xylosyltransferase activity" evidence=IMP

FB|FBgn0036144 GlcAT-P "GlcAT-P" [Drosophila melanogaster (taxid:7227)]

 Score = 124 (48.7 bits), Expect = 5.0e-07, P = 5.0e-07
 Identities = 25/97 (25%), Positives = 51/97 (52%)

Query:     4 RNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGP 63
             RN  L+++  H   G+++FA   N YD++ F+++R I     WPV L++    K  +  P
Sbjct:   313 RNRGLEYLREHATEGVLYFADDDNTYDISIFEQMRYISKVAMWPVGLVT----KTGVSSP 368

Query:    64 VCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSIL 100
             +  + +++G++   +      K P+ ++ FA +   L
Sbjct:   369 IIQAGKLVGYYDGWIGGR---KYPVDMAGFAVSVKFL 402

GO:0015020 "glucuronosyltransferase activity" evidence=ISS

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IDA;NAS

GO:0046987 "N-acetyllactosamine beta-1,3-glucuronosyltransferase activity" evidence=IDA

GO:0006688 "glycosphingolipid biosynthetic process" evidence=NAS

GO:0046988 "asioloorosomucoid beta-1,3-glucuronosyltransferase activity" evidence=IDA

GO:0046989 "galactosyl beta-1,3 N-acetylgalactosamine beta-1,3-glucuronosyltransferase activity" evidence=IDA

GO:0009101 "glycoprotein biosynthetic process" evidence=NAS

GO:0030166 "proteoglycan biosynthetic process" evidence=NAS

GO:0016020 "membrane" evidence=IEA

GO:0007422 "peripheral nervous system development" evidence=IMP

WB|WBGene00005026 sqv-8 [Caenorhabditis elegans (taxid:6239)]

 Score = 113 (44.8 bits), Expect = 4.7e-06, P = 4.7e-06
 Identities = 33/103 (32%), Positives = 55/103 (53%)

Query:     3 QRNVALKHIEHHRLSGI----VHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKV 58
             QRN AL  I++ +LSG+    V+F    N YDL  F E+R ++  G WPV ++      +
Sbjct:   182 QRNRALLWIQN-QLSGVKEGVVYFGDDDNTYDLKIFGEMRKVKNAGVWPVGIVGG----M 236

Query:    59 IIEGPVCDSSQVIGWHLKKLNNETDAKP-PIHVSSFAFNSSIL 100
              +E P+ + +  I  H   +      +P PI +++FA N S++
Sbjct:   237 FVETPILEKNGSIS-HFNAVWKPE--RPFPIDMAAFAVNISLV 276

GO:0016020 "membrane" evidence=IEA;IDA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0002009 "morphogenesis of an epithelium" evidence=IMP

GO:0040025 "vulval development" evidence=IMP

GO:0018991 "oviposition" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0007286 "spermatid development" evidence=IMP

GO:0015020 "glucuronosyltransferase activity" evidence=IDA

GO:0030206 "chondroitin sulfate biosynthetic process" evidence=IMP

GO:0060465 "pharynx development" evidence=IMP

TAIR|locus:2115090 IRX14 "irregular xylem 14" [Arabidopsis thaliana (taxid:3702)]

 Score = 92 (37.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
 Identities = 18/56 (32%), Positives = 36/56 (64%)

Query:     7 ALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALL--SANKQKVII 60
             AL+ +   +L GIV FA  SN++ +  FDE+++++ +G   V +L  S N +++++
Sbjct:   244 ALRVVREEKLDGIVMFADDSNMHSMELFDEIQNVKWFGTVSVGILAHSGNAEEMVL 299

GO:0005794 "Golgi apparatus" evidence=ISM;IDA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=ISS

GO:0010051 "xylem and phloem pattern formation" evidence=IMP

GO:0010154 "fruit development" evidence=IMP

GO:0010417 "glucuronoxylan biosynthetic process" evidence=IMP

GO:0042285 "xylosyltransferase activity" evidence=IMP

GO:0048367 "shoot system development" evidence=IMP

GO:0007155 "cell adhesion" evidence=RCA

GO:0010090 "trichome morphogenesis" evidence=RCA

GO:0045010 "actin nucleation" evidence=RCA

GO:0048765 "root hair cell differentiation" evidence=RCA

GO:0071555 "cell wall organization" evidence=RCA

GO:0005768 "endosome" evidence=IDA

GO:0005802 "trans-Golgi network" evidence=IDA

UNIPROTKB|Q9NPZ5 B3GAT2 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2" [Homo sapiens (taxid:9606)]

 Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 41/155 (26%), Positives = 66/155 (42%)

Query:     3 QRNVALKHI----EHHRLS-GIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQK 57
             QRN  L  +    +H R   G++ FA   N Y L  F E+R       WPV L+   +  
Sbjct:   159 QRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRY- 217

Query:    58 VIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSS-ILWDPE----RWGRPSSV 112
                E P+ ++ +V+GW+        D    I ++ FA +   IL +P+    R G    +
Sbjct:   218 ---ERPLVENGKVVGWYT---GWRADRPFAIDMAGFAVSLQVILSNPKAVFKRRGSQPGM 271

Query:   113 QQTS---QVKTPYLLRMFGYECFSNTLGNHQTNKV 144
             Q++    Q+ T   L      C    + + +T KV
Sbjct:   272 QESDFLKQITTVEELEPKANNCTKVLVWHTRTEKV 306

GO:0016021 "integral to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=ISS

GO:0000139 "Golgi membrane" evidence=TAS

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0030203 "glycosaminoglycan metabolic process" evidence=TAS

GO:0030204 "chondroitin sulfate metabolic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q5CAZ6 B3GAT2 "Galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2" [Canis lupus familiaris (taxid:9615)]

 Score = 109 (43.4 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 41/155 (26%), Positives = 66/155 (42%)

Query:     3 QRNVALKHI----EHHRLS-GIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQK 57
             QRN  L  +    +H R   G++ FA   N Y L  F E+R       WPV L+   +  
Sbjct:   165 QRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRY- 223

Query:    58 VIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSS-ILWDPE----RWGRPSSV 112
                E P+ ++ +V+GW+        D    I ++ FA +   IL +P+    R G    +
Sbjct:   224 ---ERPLVENGKVVGWYT---GWRADRPFAIDMAGFAVSLQVILSNPKAVFKRRGSQPGM 277

Query:   113 QQTS---QVKTPYLLRMFGYECFSNTLGNHQTNKV 144
             Q++    Q+ T   L      C    + + +T KV
Sbjct:   278 QESDFLKQITTVEELEPKANNCTKVLVWHTRTEKV 312

GO:0006486 "protein glycosylation" evidence=IEA

GO:0000139 "Golgi membrane" evidence=IEA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|F1MFX3 B3GAT2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 107 (42.7 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 41/155 (26%), Positives = 65/155 (41%)

Query:     3 QRNVALKHIE----HHRLS-GIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQK 57
             QRN  L  +     H R   G++ FA   N Y L  F E+R       WPV L+   +  
Sbjct:   162 QRNAGLAWLRQRHGHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRRY- 220

Query:    58 VIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSS-ILWDPE----RWGRPSSV 112
                E P+ ++ +V+GW+        D    I ++ FA +   IL +P+    R G    +
Sbjct:   221 ---ERPLVENGKVVGWYT---GWRADRPFAIDMAGFAVSLQVILSNPKAVFKRRGSQPGM 274

Query:   113 QQTS---QVKTPYLLRMFGYECFSNTLGNHQTNKV 144
             Q++    Q+ T   L      C    + + +T KV
Sbjct:   275 QESDFLRQITTVEELEPKANNCTKVLVWHTRTEKV 309

GO:0016020 "membrane" evidence=IEA

GO:0015018 "galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9ZQC6	IRX9_ARATH	2, ., 4, ., 2, ., -	0.7317	0.8367	0.3504	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.4.1	LOW CONFIDENCE prediction!
3rd Layer	2.4.1.135	LOW CONFIDENCE prediction!

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Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: estExt_fgenesh4_pg.C_280128 glycosyl transferase (EC-2.4.2.24) (194 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

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Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	147
PLN02458	346	PLN02458, PLN02458, transferase, transferring glyc	5e-87
cd00218	223	cd00218, GlcAT-I, Beta1,3-glucuronyltransferase I	9e-45
pfam03360	206	pfam03360, Glyco_transf_43, Glycosyltransferase fa	2e-36

>gnl|CDD|215252 PLN02458, PLN02458, transferase, transferring glycosyl groups

 Score =  257 bits (658), Expect = 5e-87
 Identities = 100/117 (85%), Positives = 112/117 (95%)

Query: 1   DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVII 60
           DHQRN+AL+HIEHH+LSGIVHFAG+SNVYDL FFDE+RDIEV+G WP+ALLSAN+ KVII
Sbjct: 187 DHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIRDIEVFGTWPMALLSANRNKVII 246

Query: 61  EGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQ 117
           EGPVCDSSQVIGWHLKK+NNET+ +PPIH+SSFAFNSSILWDPERWGRPSSVQ TSQ
Sbjct: 247 EGPVCDSSQVIGWHLKKMNNETETRPPIHISSFAFNSSILWDPERWGRPSSVQGTSQ 303

Length = 346

>gnl|CDD|132995 cd00218, GlcAT-I, Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

 Score =  145 bits (368), Expect = 9e-45
 Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 10/116 (8%)

Query: 1   DHQRNVALKHIEHH---RLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQK 57
             QRN+AL+ I  H   +L G+V+FA   N YDL  F+E+R I+  G WPV L+      
Sbjct: 77  VEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMRKIKRVGVWPVGLVGG---- 132

Query: 58  VIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQ 113
           + +EGPVC++ +V+GWH      + +   PI ++ FAFNS +LWDP R   P S +
Sbjct: 133 LRVEGPVCENGKVVGWH---TAWKPERPFPIDMAGFAFNSKLLWDPPRAVFPYSAK 185

Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). Length = 223

>gnl|CDD|217513 pfam03360, Glyco_transf_43, Glycosyltransferase family 43

 Score =  123 bits (311), Expect = 2e-36
 Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 21/144 (14%)

Query: 1   DHQRNVALKHIE---HHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQK 57
             QRN+AL+ I     H+L G+V+FA   N YDL  F+E+R+++  G WPV L+      
Sbjct: 59  VEQRNLALRWIRQNGEHKLEGVVYFADDDNTYDLELFEEMRNVKKVGVWPVGLVG----G 114

Query: 58  VIIEGPVCDSSQVIGWHLKKLNNETDAKP-PIHVSSFAFNSSILWD---------PERWG 107
           + +EGPV ++ +V+GWH          +P PI ++ FA N  ++ D           R G
Sbjct: 115 LRVEGPVVNNGKVVGWH----TVWKPKRPFPIDMAGFAVNLKLILDRPNAVFGFKCLRGG 170

Query: 108 RPSSVQQTSQVKTPYLLRMFGYEC 131
              S            L      C
Sbjct: 171 YQESSFLEQLGLDLNDLEPLANNC 194

Length = 206

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	147
PLN02458	346	transferase, transferring glycosyl groups	100.0
cd00218	223	GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I)	100.0
PF03360	207	Glyco_transf_43: Glycosyltransferase family 43; In	100.0
KOG1476	330	consensus Beta-1,3-glucuronyltransferase B3GAT1/SQ	100.0

>PLN02458 transferase, transferring glycosyl groups

Probab=100.00  E-value=3.4e-60  Score=407.55  Aligned_cols=140  Identities=73%  Similarity=1.192  Sum_probs=133.3

Q ss_pred             ChhhhhHHHHHHhcCCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCCeeEEEEeccCCC
Q 042066            1 DHQRNVALKHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKLNN   80 (147)
Q Consensus         1 ~~qRN~AL~~Ir~~~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g~V~gW~~~~~~~   80 (147)
                      ++|||+||+|||+|+++||||||||||+||++||||||+||+||+||||++|++++++.+|||+|++|||+|||+.|.++
T Consensus       187 ~~QRN~AL~~IR~h~l~GVVyFADDdNtYsl~LFeEmR~ik~vG~WPVGlvg~~~~~~~vEGPvc~~gkVvGWht~w~~~  266 (346)
T PLN02458        187 DHQRNLALRHIEHHKLSGIVHFAGLSNVYDLDFFDEIRDIEVFGTWPMALLSANRNKVIIEGPVCDSSQVIGWHLKKMNN  266 (346)
T ss_pred             HHHHHHHHHHHHhcCcCceEEEccCCCcccHHHHHHHhcCceeeecceEEeecccccceeECceecCCeEeEEecccccc
Confidence            47999999999999999999999999999999999999999999999999999999999999999999999999998666


Q ss_pred             CCCCCCCcccceeeeecccccCCCCCCCCCCCCCcccchHHHHHhhhcc----------ccccccccccc
Q 042066           81 ETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGY----------ECFSNTLGNHQ  140 (147)
Q Consensus        81 ~~~R~fpiDmAGFA~ns~lL~~p~~f~rp~~~p~~~~ds~~Fl~~lv~~----------~~~~~~~~~~~  140 (147)
                      .++|+||||||||||||+|||||++|+||++.|+++|||++||+||+..          ++|+.+|+||-
T Consensus       267 ~~~RrfpIDMAGFAfNs~lLwdP~rw~Rp~~~~~~~qeS~~Fv~ql~~~de~q~egipa~~CskVmvWhl  336 (346)
T PLN02458        267 ETETRPPIHISSFAFNSSILWDPERWGRPSSVQGTSQNSIKFVKQVALEDETKLKGIPPEDCSKIMLWRL  336 (346)
T ss_pred             CCCCCCCcceeeeeeehhhhcChhhhCCCCCCCccchHHHHHHHHHhhccccccccCCcCCCCEEEEEEe
Confidence            7999999999999999999999999999999999999999999999432          57999999995

>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis

Probab=100.00  E-value=5.9e-58  Score=376.38  Aligned_cols=132  Identities=40%  Similarity=0.729  Sum_probs=122.4

Q ss_pred             ChhhhhHHHHHHhc---CCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCCeeEEEEecc
Q 042066            1 DHQRNVALKHIEHH---RLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKK   77 (147)
Q Consensus         1 ~~qRN~AL~~Ir~~---~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g~V~gW~~~~   77 (147)
                      ++|||+||+|||+|   +++||||||||||+||++||||||+||+||+||||++|    ++.+|||+|++|||+|||+. 
T Consensus        77 ~~qRn~AL~~ir~~~~~~~~GVVyFADDdN~Ysl~lF~emR~i~~vg~WPVglvg----~~~vegP~c~~gkV~gw~~~-  151 (223)
T cd00218          77 VEQRNLALRWIREHLSAKLDGVVYFADDDNTYDLELFEEMRKIKRVGVWPVGLVG----GLRVEGPVCENGKVVGWHTA-  151 (223)
T ss_pred             HHHHHHHHHHHHhccccCcceEEEEccCCCcccHHHHHHHhccCeeeEEEeeeec----CceeeccEeeCCeEeEEecC-
Confidence            37999999999999   99999999999999999999999999999999999999    59999999999999999998 


Q ss_pred             CCCCCCCCCCcccceeeeecccccCCCCCCCCCCCCCcccchHHHHHhhhc--------cccccccccccc
Q 042066           78 LNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFG--------YECFSNTLGNHQ  140 (147)
Q Consensus        78 ~~~~~~R~fpiDmAGFA~ns~lL~~p~~f~rp~~~p~~~~ds~~Fl~~lv~--------~~~~~~~~~~~~  140 (147)
                        |.+.||||||||||||||++||+|.+|.+|.+.+.++|+| +||++|+.        .+||+++|+||-
T Consensus       152 --w~~~R~f~idmAGFA~n~~ll~~~~~~~~~~~~~~g~~es-~fl~~L~~~~~~~Epl~~~c~~VlvWht  219 (223)
T cd00218         152 --WKPERPFPIDMAGFAFNSKLLWDPPRAVFPYSAKRGYQES-SFLEQLVLDRKELEPLANNCSKVLVWHT  219 (223)
T ss_pred             --CCCCCCCcceeeeEEEehhhhccCccccCCCCCCCcchhH-HhHHHHcccHHhcccccCCCCEEEEEee
Confidence              5899999999999999999999988888776656666656 89999987        568999999995

Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).

>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases

Probab=100.00  E-value=5.7e-55  Score=354.95  Aligned_cols=130  Identities=42%  Similarity=0.758  Sum_probs=98.3

Q ss_pred             hhhhhHHHHHH---hcCCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCCeeEEEEeccC
Q 042066            2 HQRNVALKHIE---HHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKKL   78 (147)
Q Consensus         2 ~qRN~AL~~Ir---~~~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g~V~gW~~~~~   78 (147)
                      +|||+||+|||   .++++|||||||||||||+|||||||+||+||+||||++|    ++.+|||+|++++|+|||+.  
T Consensus        60 ~qRn~AL~~ir~~~~~~~~GVVyFaDDdNtYdl~LF~emR~~k~vgvWPVG~vg----~~~~EgP~~~~~~Vvgw~~~--  133 (207)
T PF03360_consen   60 HQRNAALRWIRNNANHRLDGVVYFADDDNTYDLRLFDEMRKTKRVGVWPVGLVG----GLRVEGPVCNNGKVVGWHTS--  133 (207)
T ss_dssp             HHHHHHHHHHHSTTTSSS-EEEEE--TTSEE-HHHHHHHCT-SSEEE--EEEET----TEEEEEEEEETTEEEEEE-S--
T ss_pred             HHHHHHHHHHHhcccCCCCcEEEECCCCCeeeHHHHHHHHhhhcccceeeceec----cceeeccEEeCCEEEEEEcc--
Confidence            69999999999   8899999999999999999999999999999999999999    69999999999999999998  


Q ss_pred             CCCCCCCCCcccceeeeecccccC-CC-CCCCCCCCCC-cccchHHHHHhhh-cc-------ccccccccccc
Q 042066           79 NNETDAKPPIHVSSFAFNSSILWD-PE-RWGRPSSVQQ-TSQVKTPYLLRMF-GY-------ECFSNTLGNHQ  140 (147)
Q Consensus        79 ~~~~~R~fpiDmAGFA~ns~lL~~-p~-~f~rp~~~p~-~~~ds~~Fl~~lv-~~-------~~~~~~~~~~~  140 (147)
                       |.++||||||||||||||+|||+ |+ .|. +...++ +++|| +||++|+ +.       +||+++|+||-
T Consensus       134 -~~~~R~fpiDmAGFAvn~~ll~~~~~~~~~-~~~~~~~G~~Es-~fL~~l~~~~~~lEp~a~~c~~VlVWHt  203 (207)
T PF03360_consen  134 -WKPDRPFPIDMAGFAVNSRLLWDRPEAIFD-YSAPRGEGYQES-SFLSQLVLDREDLEPLADNCSKVLVWHT  203 (207)
T ss_dssp             -SSTTSTT---GGGEEEEHHHHHHSTT-----TTSSTT-TGHHH-HHHHTT---GGGEEE-HHHHTS--EE--
T ss_pred             -cCCCCCccccceeeeeehHHHhcCcccccc-ccCCCCCCcchh-HHHHHhccChhhcccccCCCCEEEEeee
Confidence             58999999999999999999997 55 554 333331 55556 8999999 32       47789999995

These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.

>KOG1476 consensus Beta-1,3-glucuronyltransferase B3GAT1/SQV-8 [Posttranslational modification, protein turnover, chaperones]

Probab=100.00  E-value=1.5e-50  Score=346.00  Aligned_cols=132  Identities=33%  Similarity=0.559  Sum_probs=116.0

Q ss_pred             ChhhhhHHHHHH-----hcCCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCCeeEEEEe
Q 042066            1 DHQRNVALKHIE-----HHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHL   75 (147)
Q Consensus         1 ~~qRN~AL~~Ir-----~~~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g~V~gW~~   75 (147)
                      .+|||+||+|||     +|+++||||||||||+||++||+|||+|+++|+||||++|    |+.||||+|++|||+|||+
T Consensus       161 ~~qRn~aL~~ir~~~~~~~~~~GVVyFADDdN~YdleLF~eiR~v~~~gvWpVg~vg----g~~vE~P~v~~~kvvg~~~  236 (330)
T KOG1476|consen  161 WEQRNMALRWIRSRILRHHKLEGVVYFADDDNTYDLELFEEIRNVKKFGVWPVGLVG----GARVEGPVVNNGKVVGWHT  236 (330)
T ss_pred             hhHHHHHHHHHHHhcccccccceEEEEccCCcchhHHHHHHHhccceeeeEeeeecC----CeeeecceeccCeeEEEEe
Confidence            489999999999     7799999999999999999999999999999999999999    6999999999999999999


Q ss_pred             ccCCCCCCCCCCcccceeeeecccccC-CC-CCCCCCCCCCcccchHHHHHhhhc--------cccccccccccc
Q 042066           76 KKLNNETDAKPPIHVSSFAFNSSILWD-PE-RWGRPSSVQQTSQVKTPYLLRMFG--------YECFSNTLGNHQ  140 (147)
Q Consensus        76 ~~~~~~~~R~fpiDmAGFA~ns~lL~~-p~-~f~rp~~~p~~~~ds~~Fl~~lv~--------~~~~~~~~~~~~  140 (147)
                      .   |++.||||||||||||||++||+ |. .|+.-...+.+.+|+ +||++|+.        ..||..+|+||.
T Consensus       237 ~---w~~~r~f~vdmaGFAvNl~lll~~~~a~f~~~~~~~~G~~E~-~~l~~l~~d~~~iEp~~~~c~kILvWht  307 (330)
T KOG1476|consen  237 R---WEPERPFAVDMAGFAVNLKLLLDPSNAVFKPLCPRGEGYQET-CLLEQLGLDLSDIEPLAYECTKILVWHT  307 (330)
T ss_pred             c---cccCCCCccchhhheehhhhhccCccccccccCcCCCCCcch-hHHHHhcCCHHHccccccccceEEEEEe
Confidence            9   69999999999999999999999 44 555333344355545 89999942        237888999995

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	147
2d0j_A	246	Crystal Structure Of Human Glcat-S Apo Form Length		6e-06
1fgg_A	261	Crystal Structure Of 1,3-Glucuronyltransferase I (G		1e-04
3cu0_A	281	Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In		1e-04
1v82_A	253	Crystal Structure Of Human Glcat-P Apo Form Length		5e-04

>pdb|2D0J|A Chain A, Crystal Structure Of Human Glcat-S Apo Form Length = 246

Iteration: 1
 Score = 46.2 bits (108), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 9/78 (11%)
Query: 2   HQRNVAL-----KHIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQ 56
            QRN  L     +H       G++ FA   N Y L  F E+R       WPV L+   + 
Sbjct: 81  EQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRR- 139
Query: 57  KVIIEGPVCDSSQVIGWH 74
               E P+ ++ +V+GW+
Sbjct: 140 ---YERPLVENGKVVGWY 154

>pdb|1FGG|A Chain A, Crystal Structure Of 1,3-Glucuronyltransferase I (Glcat-I) Complexed With Gal-Gal-Xyl, Udp, And Mn2+ Length = 261

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 18  GIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKK 77
           G+V+FA   N Y    F+E+R       WPV L+   +     EGP     +V+G+H   
Sbjct: 114 GVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLR----FEGPQVQDGRVVGFH--- 166
Query: 78  LNNETDAKP-PIHVSSFAFNSSILWD 102
                 ++P P+ ++ FA    +L D
Sbjct: 167 -TAWEPSRPFPVDMAGFAVALPLLLD 191

>pdb|3CU0|A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser Length = 281

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 9/86 (10%)
Query: 18  GIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLKK 77
           G+V+FA   N Y    F+E+R       WPV L+   +     EGP     +V+G+H   
Sbjct: 134 GVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVGGLR----FEGPQVQDGRVVGFH--- 186
Query: 78  LNNETDAKP-PIHVSSFAFNSSILWD 102
                 ++P P+ ++ FA    +L D
Sbjct: 187 -TAWEPSRPFPVDMAGFAVALPLLLD 211

>pdb|1V82|A Chain A, Crystal Structure Of Human Glcat-P Apo Form Length = 253

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 10/77 (12%)
Query: 3   QRNVALKHIE-----HHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQK 57
           QRN+AL+ +      +    G+V+FA   N Y L  F+E+R       WPVA +   +  
Sbjct: 88  QRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLR-- 145
Query: 58  VIIEGP-VCDSSQVIGW 73
              E P V  + +V+ W
Sbjct: 146 --YEAPRVNGAGKVVRW 160

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	147
3cu0_A	281	Galactosylgalactosylxylosylprotein 3-beta- glucuro	9e-35
2d0j_A	246	Galactosylgalactosylxylosylprotein 3-beta- glucuro	7e-34
1v84_A	253	Galactosylgalactosylxylosylprotein 3-beta- glucuro	3e-33

>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A* Length = 281

 Score =  120 bits (303), Expect = 9e-35
 Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 2   HQRNVALKHIEHHR-------------LSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPV 48
            QRN AL  +                   G+V+FA   N Y    F+E+R       WPV
Sbjct: 105 EQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPV 164

Query: 49  ALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGR 108
            L+   +     EGP     +V+G+H      E     P+ ++ FA    +L D      
Sbjct: 165 GLVGGLR----FEGPQVQDGRVVGFH---TAWEPSRPFPVDMAGFAVALPLLLDKPNAQF 217

Query: 109 PSSVQQTSQ 117
            S+  +   
Sbjct: 218 DSTAPRGHL 226

>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens} Length = 246

 Score =  117 bits (295), Expect = 7e-34
 Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 13/122 (10%)

Query: 2   HQRNVALK-----HIEHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQ 56
            QRN  L      H       G++ FA   N Y L  F E+R       WPV L+   + 
Sbjct: 81  EQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVGGRR- 139

Query: 57  KVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSS-ILWDPERWGRPSSVQQT 115
               E P+ ++ +V+GW+        D    I ++ FA +   IL +P+   +    Q  
Sbjct: 140 ---YERPLVENGKVVGWY---TGWRADRPFAIDMAGFAVSLQVILSNPKAVFKRRGSQPG 193

Query: 116 SQ 117
            Q
Sbjct: 194 MQ 195

>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A* Length = 253

 Score =  116 bits (292), Expect = 3e-33
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 14/123 (11%)

Query: 2   HQRNVALKHIE-----HHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQ 56
            QRN+AL+ +      +    G+V+FA   N Y L  F+E+R       WPVA +   + 
Sbjct: 87  MQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLR- 145

Query: 57  KVIIEGPVC-DSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWD-PERWGRPSSVQQ 114
               E P    + +V+ W       +      I ++ FA N  ++    + + +   V+ 
Sbjct: 146 ---YEAPRVNGAGKVVRWK---TVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKG 199

Query: 115 TSQ 117
             Q
Sbjct: 200 GYQ 202

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	147
2d0j_A	246	Galactosylgalactosylxylosylprotein 3-beta- glucuro	100.0
3cu0_A	281	Galactosylgalactosylxylosylprotein 3-beta- glucuro	100.0
1v84_A	253	Galactosylgalactosylxylosylprotein 3-beta- glucuro	100.0

>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-54  Score=359.14  Aligned_cols=130  Identities=25%  Similarity=0.474  Sum_probs=118.1

Q ss_pred             hhhhhHHHHHHhcCC-----ccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCCeeEEEEec
Q 042066            2 HQRNVALKHIEHHRL-----SGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSSQVIGWHLK   76 (147)
Q Consensus         2 ~qRN~AL~~Ir~~~~-----~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g~V~gW~~~   76 (147)
                      +|||+||+|||+|++     +||||||||||+||++||||||+||+||+||||++|    +..+|||+|++|||+|||+.
T Consensus        81 ~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR~i~~vgvWPVglvg----~~~~EgPv~~~gkVvGw~t~  156 (246)
T 2d0j_A           81 EQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMRTTRKVSVWPVGLVG----GRRYERPLVENGKVVGWYTG  156 (246)
T ss_dssp             HHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHTTCSSEEECCEEEET----TEEEEEEEEETTEEEEEECS
T ss_pred             HHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHhhhceeeEEEEEeec----CcceecceeeCCEecceecc
Confidence            799999999999975     799999999999999999999999999999999999    59999999999999999998


Q ss_pred             cCCCCCCCCCCcccceeeeeccccc-CCCC-CCCCCCCCCcccchHHHHHhhhcc-------ccccccccccc
Q 042066           77 KLNNETDAKPPIHVSSFAFNSSILW-DPER-WGRPSSVQQTSQVKTPYLLRMFGY-------ECFSNTLGNHQ  140 (147)
Q Consensus        77 ~~~~~~~R~fpiDmAGFA~ns~lL~-~p~~-f~rp~~~p~~~~ds~~Fl~~lv~~-------~~~~~~~~~~~  140 (147)
                         |.++|+||||||||||||++|| +|++ |.++.+++|++| | +||++|++.       +||+++|+||-
T Consensus       157 ---w~~~R~fpiDmAGFA~N~~lll~~p~a~~~~~~~~~g~~E-s-~fL~~l~~~~~lEp~~~~c~~VlvWht  224 (246)
T 2d0j_A          157 ---WRADRPFAIDMAGFAVSLQVILSNPKAVFKRRGSQPGMQE-S-DFLKQITTVEELEPKANNCTKVLVWHT  224 (246)
T ss_dssp             ---SCTTSTTCCCGGGEEEEHHHHHHCTTCCCCTTSSSGGGHH-H-HHHHTTCCGGGCEECHHHHTCCCEECC
T ss_pred             ---cCCCCcCcccceeeEeehhhhhcCcccccccCCCCCCchh-h-HHHHHhccHhhceeccCCCCEEEEEec
Confidence               5899999999999999999665 7995 555677888876 5 799999864       37899999995

>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*

Probab=100.00  E-value=1.4e-54  Score=364.94  Aligned_cols=129  Identities=27%  Similarity=0.466  Sum_probs=115.9

Q ss_pred             hhhhhHHHHHH--------hc-C----CccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCC
Q 042066            2 HQRNVALKHIE--------HH-R----LSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSS   68 (147)
Q Consensus         2 ~qRN~AL~~Ir--------~~-~----~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g   68 (147)
                      +|||+||+|||        +| +    ++||||||||||+||++||||||+||+||+||||++|    ++.||||+|++|
T Consensus       105 ~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFdemR~ik~vgvWPVGlvg----g~~vEgPvc~~g  180 (281)
T 3cu0_A          105 EQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVG----GLRFEGPQVQDG  180 (281)
T ss_dssp             HHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHHTSCSSEEECCEEEET----TEEEEEEEEETT
T ss_pred             HHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHHhhhcceEeEEEeeccc----cceeEEEEEeCC
Confidence            79999999999        66 3    6899999999999999999999999999999999999    699999999999


Q ss_pred             eeEEEEeccCCCCCCCCCCcccceeeeecccccC-CC-CCCCCCCCCCcccchHHHHHhhhccc-------ccccccccc
Q 042066           69 QVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWD-PE-RWGRPSSVQQTSQVKTPYLLRMFGYE-------CFSNTLGNH  139 (147)
Q Consensus        69 ~V~gW~~~~~~~~~~R~fpiDmAGFA~ns~lL~~-p~-~f~rp~~~p~~~~ds~~Fl~~lv~~~-------~~~~~~~~~  139 (147)
                      ||+|||+.   |.++||||||||||||||++||+ |+ .|.  .+.+++.||| +||++|++.+       ||.++|+||
T Consensus       181 kVvGw~t~---w~~~R~fpiDMAGFA~N~~lL~~~p~a~f~--~~~~~G~qEs-~fL~~lv~~~~lEp~~~~c~~VlVWH  254 (281)
T 3cu0_A          181 RVVGFHTA---WEPSRPFPVDMAGFAVALPLLLDKPNAQFD--STAPRGHLES-SLLSHLVDPKDLEPRAANCTRVLVWH  254 (281)
T ss_dssp             EEEEEECC---SSTTCSSCCCGGGEEEEHHHHHHCTTCCCC--TTSCTTCHHH-HHHTTTCCGGGCEECHHHHTCCCEEC
T ss_pred             EEeeeecc---CCCCCCCccccceeEeehhhhhcCCccccc--CCCCCcchhh-HHHHHhccHhhcEecCCCCCEEEEEe
Confidence            99999998   58999999999999999999995 98 554  4444555668 9999997653       688999999


Q ss_pred             c
Q 042066          140 Q  140 (147)
Q Consensus       140 ~  140 (147)
                      -
T Consensus       255 t  255 (281)
T 3cu0_A          255 T  255 (281)
T ss_dssp             C
T ss_pred             c
Confidence            5

>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*

Probab=100.00  E-value=1.4e-54  Score=360.51  Aligned_cols=131  Identities=24%  Similarity=0.423  Sum_probs=115.2

Q ss_pred             hhhhhHHHHHHhc-----CCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceec-CCeeEEEEe
Q 042066            2 HQRNVALKHIEHH-----RLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCD-SSQVIGWHL   75 (147)
Q Consensus         2 ~qRN~AL~~Ir~~-----~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~-~g~V~gW~~   75 (147)
                      +|||+||+|||++     +++||||||||||+||++||||||+|++||+||||++|    ++.+|||+|+ +|||+|||+
T Consensus        87 ~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR~i~~vgvWPVglvg----~~~~EgPv~~~~gkVvGw~~  162 (253)
T 1v84_A           87 MQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVG----GLRYEAPRVNGAGKVVRWKT  162 (253)
T ss_dssp             HHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHHTCSSEEECCEESCT----TSSEEEEEECTTSCEEEEEC
T ss_pred             HHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHhccCeeEEEEEEeec----CcceecCeECCCCCEeeeec
Confidence            7999999999984     78999999999999999999999999999999999999    5899999999 899999999


Q ss_pred             ccCCCCCCCCCCcccceeeeeccccc-CCCCCCCCCCCCCcccchHHHHHhhhcc-------ccccccccccc
Q 042066           76 KKLNNETDAKPPIHVSSFAFNSSILW-DPERWGRPSSVQQTSQVKTPYLLRMFGY-------ECFSNTLGNHQ  140 (147)
Q Consensus        76 ~~~~~~~~R~fpiDmAGFA~ns~lL~-~p~~f~rp~~~p~~~~ds~~Fl~~lv~~-------~~~~~~~~~~~  140 (147)
                      .   |.++||||||||||||||++|| +|+++.++...+++.||| .||++|++.       ++|.++|+||-
T Consensus       163 ~---w~~~R~fpiDmAGFA~N~~lll~~p~a~~~~~~~~~g~~Es-~fL~~l~~~~~lEp~~~~C~~VlvWHt  231 (253)
T 1v84_A          163 V---FDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQES-SLLRELVTLNDLEPKAANCTKILVWHT  231 (253)
T ss_dssp             S---SCTTSTTCCCGGGEEEEHHHHHHSTTCCCCSSSSCTTCHHH-HHHHHHCCGGGEEECHHHHTSCCEECC
T ss_pred             c---cCCCCCccceeeeeEEEehhhhhCCCceeccccCCCcchhh-HHHHhhhhHhhcEecCCCCCEEEEEec
Confidence            8   5899999999999999999776 599665444334445557 799999743       36789999995

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	147
d3cu0a1	261	c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (g	3e-41
d1v82a_	252	c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, Gl	4e-40

>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]} Length = 261

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: 1,3-Glucuronyltransferase I (glcAT-I)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  136 bits (343), Expect = 3e-41
 Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 20/129 (15%)

Query: 2   HQRNVALKHIEHH-------------RLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPV 48
            QRN AL  +                   G+V+FA   N Y    F+E+R       WPV
Sbjct: 85  EQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPV 144

Query: 49  ALLSANKQKVIIEGPVCDSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGR 108
            L+   +     EGP     +V+G+H      E     P+ ++ FA    +L D      
Sbjct: 145 GLVGGLR----FEGPQVQDGRVVGFH---TAWEPSRPFPVDMAGFAVALPLLLDKPNAQF 197

Query: 109 PSSVQQTSQ 117
            S+  +   
Sbjct: 198 DSTAPRGHL 206

>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]} Length = 252

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (335), Expect = 4e-40
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 14/123 (11%)

Query: 2   HQRNVALKHI-----EHHRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQ 56
            QRN+AL+ +      +    G+V+FA   N Y L  F+E+R       WPVA +   + 
Sbjct: 86  MQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVGGLR- 144

Query: 57  KVIIEGPVC-DSSQVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWD-PERWGRPSSVQQ 114
               E P    + +V+ W       +      I ++ FA N  ++    + + +   V+ 
Sbjct: 145 ---YEAPRVNGAGKVVRWK---TVFDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKG 198

Query: 115 TSQ 117
             Q
Sbjct: 199 GYQ 201

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	147
d3cu0a1	261	1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo	100.0
d1v82a_	252	Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (	100.0

>d3cu0a1 c.68.1.7 (A:75-335) 1,3-Glucuronyltransferase I (glcAT-I) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: 1,3-Glucuronyltransferase I (glcAT-I)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-56  Score=371.69  Aligned_cols=131  Identities=26%  Similarity=0.393  Sum_probs=118.0

Q ss_pred             hhhhhHHHHHHhc-------------CCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecCC
Q 042066            2 HQRNVALKHIEHH-------------RLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDSS   68 (147)
Q Consensus         2 ~qRN~AL~~Ir~~-------------~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~g   68 (147)
                      +|||+||+|||+|             +++||||||||||+||++||||||+||+||+||||++|    ++.+|||+|++|
T Consensus        85 ~qRn~aL~~ir~~~~~~~~~~~~~~~~~~GVVyFADDdNtYsl~LF~emR~~k~vgvWPVglvg----~~~vEgP~c~~g  160 (261)
T d3cu0a1          85 EQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEEMRWTRGVSVWPVGLVG----GLRFEGPQVQDG  160 (261)
T ss_dssp             HHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHHHTSCSSEEECCEEEET----TEEEEEEEEETT
T ss_pred             HHHHHHHHHHHHcccccccccccccCCCceEEEEecCCCcccHHHHHHHhheeeeeeEEEEeec----CcccccccccCC
Confidence            6999999999998             57899999999999999999999999999999999999    699999999999


Q ss_pred             eeEEEEeccCCCCCCCCCCcccceeeeecccccCCCCCCCCCCCCCcccchHHHHHhhhcc-------ccccccccccc
Q 042066           69 QVIGWHLKKLNNETDAKPPIHVSSFAFNSSILWDPERWGRPSSVQQTSQVKTPYLLRMFGY-------ECFSNTLGNHQ  140 (147)
Q Consensus        69 ~V~gW~~~~~~~~~~R~fpiDmAGFA~ns~lL~~p~~f~rp~~~p~~~~ds~~Fl~~lv~~-------~~~~~~~~~~~  140 (147)
                      ||+|||+.   |.|+||||||||||||||+||||+.+|..|...+++.||| .||++|++.       +||+++|+||-
T Consensus       161 kVvgwht~---w~~~R~fpiDmAGFA~N~~lL~d~p~~~~~~~~~~G~~Es-~fL~~L~~~~~lEpl~~~CskVlvWHt  235 (261)
T d3cu0a1         161 RVVGFHTA---WEPSRPFPVDMAGFAVALPLLLDKPNAQFDSTAPRGHLES-SLLSHLVDPKDLEPRAANCTRVLVWHT  235 (261)
T ss_dssp             EEEEEECC---SSTTCSSCCCGGGEEEEHHHHHHCTTCCCCTTSCTTCHHH-HHHTTTCCGGGCEECHHHHTCCCEECC
T ss_pred             eeeEEecc---CCCCCCCccceeeeeeehhhhhcCCccCCCCCCCCcchhh-HHHHHhccHHhCeeccCCCCEEEEEEc
Confidence            99999998   5899999999999999999999855444455666566667 899999863       48999999995

>d1v82a_ c.68.1.7 (A:) Beta-1,3-glucuronyltransferase 1, GlcAT-P {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: 1,3-glucuronyltransferase
domain: Beta-1,3-glucuronyltransferase 1, GlcAT-P
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-55  Score=363.91  Aligned_cols=131  Identities=24%  Similarity=0.425  Sum_probs=117.2

Q ss_pred             hhhhhHHHHHHh-----cCCccEEEEecCCCcccHHhhHhhhcceeecccceeeeecCcceeEEecceecC-CeeEEEEe
Q 042066            2 HQRNVALKHIEH-----HRLSGIVHFAGVSNVYDLAFFDELRDIEVYGAWPVALLSANKQKVIIEGPVCDS-SQVIGWHL   75 (147)
Q Consensus         2 ~qRN~AL~~Ir~-----~~~~GVVyFaDDDNtYdl~lFdemR~~~~vgvWPVG~vg~~~~~~~vEgPvc~~-g~V~gW~~   75 (147)
                      +|||+||+|||+     |+++||||||||||+||++||||||+||+||+||||++|    ++.+|||+|++ |||+|||+
T Consensus        86 ~qRn~aL~~iR~~~~~~~~~~GVVyFADDdNtYsl~lFdemR~ik~vgvWPVglvg----~~~vEgP~~~~~gkVvgw~t  161 (252)
T d1v82a_          86 MQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMRSTRRVSVWPVAFVG----GLRYEAPRVNGAGKVVRWKT  161 (252)
T ss_dssp             HHHHHHHHHHHHHSCTTCCCCEEEEECCTTSEECHHHHHHHTTCSSEEECCEESCT----TSSEEEEEECTTSCEEEEEC
T ss_pred             HHHHHHHHHHHHhcccccCcceEEEEecCCCcccHHHHHHHhhcceEEEEeeEeec----cccccCceEcCCCcEEEEec
Confidence            699999999987     578999999999999999999999999999999999999    59999999975 89999999


Q ss_pred             ccCCCCCCCCCCcccceeeeecccccC-CCCCCCCCCCCCcccchHHHHHhhhcc-------ccccccccccc
Q 042066           76 KKLNNETDAKPPIHVSSFAFNSSILWD-PERWGRPSSVQQTSQVKTPYLLRMFGY-------ECFSNTLGNHQ  140 (147)
Q Consensus        76 ~~~~~~~~R~fpiDmAGFA~ns~lL~~-p~~f~rp~~~p~~~~ds~~Fl~~lv~~-------~~~~~~~~~~~  140 (147)
                      .   |.+.||||||||||||||++||+ |+.+.++...+++.||| .||++|++.       +||+++|+||-
T Consensus       162 ~---w~~~R~fpidmAGFA~N~~lL~~~p~~~~~~~~~~~G~qes-~fl~~Lv~~~~lEpla~~cskVlvWht  230 (252)
T d1v82a_         162 V---FDPHRPFAIDMAGFAVNLRLILQRSQAYFKLRGVKGGYQES-SLLRELVTLNDLEPKAANCTKILVWHT  230 (252)
T ss_dssp             S---SCTTSTTCCCGGGEEEEHHHHHHSTTCCCCCSSCCTTCHHH-HHHHHHCCGGGEEECHHHHTSCCEECC
T ss_pred             C---CCCCCCccccceeeEeehHhhhcCcccccCcccCCCcchhh-HHHHHcccHHhCccccCCCCEEEEEEc
Confidence            8   58999999999999999999997 88666555555555556 899999874       38899999995