Citrus Sinensis ID: 042119

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
MASLRSLSCESQIPAELLIASVMQIHASISKLESLKPSKQVNSIFSRLVKLCTIPSSIDITALPQEVQKMRESLIVLCGRAEGLLELEFATFLTKIPQPLNNLSLFPYYGNYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDLLDFEVLSAVHPNDDVINSVVLVRNSQGYL
ccccccccccccccHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccccccHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEccccccHHHHHHHHHcccccEEEEECccHHHHHHHHHHHHHccccccccEEEEcccccHHHHcccccEEEEcccccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHcccccccccccccEEEEEEccccccccEEEEEEEccccc
************IPAELLIASVMQIHASISKLESLKPSKQVNSIFSRLVKLCTIPSSIDITALPQEVQKMRESLIVLCGRAEGLLELEFATFLTKIPQPLNNLSLFPYYGNYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDLLDFEVLSAVHPNDDVINSVVLVRNS****
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MASLRSLSCESQIPAELLIASVMQIHASISKLESLKPSKQVNSIFSRLVKLCTIPSSIDITALPQEVQKMRESLIVLCGRAEGLLELEFATFLTKIPQPLNNLSLFPYYGNYVKLSKLEYTILSENGVVQPKKVAFVGSGPMPLTSIIMAKHHLTSTHFDNFDIDEAANDVARSIVASDAEFEGRMKFLTRDIMEVKEQLGEYDCIFLAALVGMSKEEKLTILGHIRKYMKDGGILLVRSAKGARAFLYPVVVEHDLLDFEVLSAVHPNDDVINSVVLVRNSQGYL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Nicotianamine synthase 2 Synthesizes nicotianamine, a polyamine which serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.probableQ9FKT9
Nicotianamine synthase 2 Synthesizes nicotianamine, a polyamine that is the first intermediate in the synthesis of the phytosiderophores of the mugineic acid type found in gramineae which serve as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.probableQ10MI9
Nicotianamine synthase Synthesizes nicotianamine, a polyamine that serves as a sensor for the physiological iron status within the plant, and/or might be involved in the transport of iron.probableQ9XGI7

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.5.-.-Transferring alkyl or aryl groups, other than methyl groups.probable
2.5.1.-5,10-methenyltetrahydromethanopterin hydrogenase.probable
2.5.1.43Nicotianamine synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3FPF, chain A
Confidence level:very confident
Coverage over the Query: 17-282
View the alignment between query and template
View the model in PyMOL