Citrus Sinensis ID: 042200

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-
Protein Sequence
VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD
Secondary Structure (PSIPRED)
cHHHcccEEEEEEccHHHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHcccccEEEEcccccccccccccHHcHHHHHHHHHHcccccEEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccHHHHccccccHHHHHHHHHHccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHcccEEEEEEccHHHHHHHHHHHccccEEEEEEEEcccHHHHHHHHHHHHcccEEEEEEcccccccccccccHHHHHHHEEEEEEccEcEEEEEEEEHHEEcccccEHHHHHHHHHHHHHHHHHHHHHHHHcEEEEEEEEccEccHHHHHHccccHHHHHHHHHHHcccccccccccc
Coil and Loop (DISEMBL)
VFIQHRAKVIIADVQDDLCRALCkefdsdelisYVCCNvtidsdvknvfdftkfgkldimfnnagiisnmdrttldtdneKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELgqydirvnSIAHIvsatpffcnamgidKKTFKELLYASANLKGVVLKAAD
Flexible Loop (DISEMBL)
vfiqhrakviiadvqdDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFnnagiisnmdrttlDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASAnlkgvvlkaad
Low Complexity Region (SEG)
VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD
Disordered region (IsUnstruct)
**IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVL****
Disordered Region (DISOPRED)
VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI**K****LLYASANLK*VVL****
Disordered Region (DISEMBL)
VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD
Disordered Region (DISPRO)
VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKG*******
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	181	2.2.26 [Sep-21-2011]
Q94K41	257	Short-chain dehydrogenase	yes	no	0.983	0.692	0.373	2e-28
F4J2Z7	298	Short-chain dehydrogenase	no	no	0.977	0.593	0.371	3e-23
Q7FAE1	274	Momilactone A synthase OS	no	no	0.988	0.653	0.376	2e-22
Q9SCU0	303	Short-chain dehydrogenase	no	no	0.983	0.587	0.321	2e-21
F1SWA0	267	Zerumbone synthase OS=Zin	N/A	no	1.0	0.677	0.330	7e-21
O80713	257	Short-chain dehydrogenase	no	no	0.955	0.673	0.346	2e-20
O80714	258	Short-chain dehydrogenase	no	no	0.972	0.682	0.33	3e-20
F4J300	259	Short-chain dehydrogenase	no	no	0.955	0.667	0.336	9e-19
Q9C826	285	Xanthoxin dehydrogenase O	no	no	0.994	0.631	0.323	4e-16
P50160	336	Sex determination protein	N/A	no	0.845	0.455	0.286	6e-15

>sp|Q94K41|SDR3B_ARATH Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana GN=SDR3b PE=2 SV=1

 Score =  124 bits (312), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 112/198 (56%), Gaps = 20/198 (10%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F +H A+V+I DVQD+L + +      D+  SY  C+VT +++V+N   FT  K+GKLD
Sbjct: 27  LFTEHGARVVIVDVQDELGQNVAVSIGEDKA-SYYHCDVTNETEVENAVKFTVEKYGKLD 85

Query: 59  IMFNNAGII-----------SNMDRT---TLDTDNEKVK---RVMIMVVFLGVLLFTANL 101
           ++F+NAG+I           + +DRT    L      +K   R M+     G ++ T ++
Sbjct: 86  VLFSNAGVIEPFVSILDLNLNELDRTIAINLRGTAAFIKHAARAMVEKGIRGSIVCTTSV 145

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A E  G A + Y  SK+ +LGL+K+    LG+Y IRVN +A    ATP  CN   ++   
Sbjct: 146 AAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNGVAPFGVATPLVCNGFKMEPNV 205

Query: 162 FKELLYASANLKGVVLKA 179
            ++   ASANLKG+VLKA
Sbjct: 206 VEQNTSASANLKGIVLKA 223

Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: -

>sp|F4J2Z7|SDR4_ARATH Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana GN=SDR4 PE=2 SV=1

 Score =  108 bits (269), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 105/199 (52%), Gaps = 22/199 (11%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F  H AKV+I D+Q++L + L      D+  S+  CNVT ++DV+N   FT  K GKLD
Sbjct: 65  LFTDHGAKVVIVDIQEELGQNLAVSIGLDK-ASFYRCNVTDETDVENAVKFTVEKHGKLD 123

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVV-----FL-------------GVLLFTAN 100
           ++F+NAG++     + LD D E   R M + V     F+             G ++ T +
Sbjct: 124 VLFSNAGVLEAFG-SVLDLDLEAFDRTMAVNVRGAAAFIKHAARSMVASGTRGSIVCTTS 182

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           +A E  G   + Y  SK+A+LGL+++ C  LGQY IRVN +A    AT           K
Sbjct: 183 IAAEIGGPGPHSYTASKHALLGLIRSACAGLGQYGIRVNGVAPYGVATGMTSAYNEEAVK 242

Query: 161 TFKELLYASANLKGVVLKA 179
             +E   A  NLKGVVLKA
Sbjct: 243 MLEEYGEALGNLKGVVLKA 261

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q7FAE1|MOMAS_ORYSJ Momilactone A synthase OS=Oryza sativa subsp. japonica GN=Os04g0179200 PE=2 SV=1

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 113/202 (55%), Gaps = 23/202 (11%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F++H A+V++AD+QD+L  +L  E   D   SYV C+VT + DV    D    +FGKLD
Sbjct: 36  LFVKHGARVVVADIQDELGASLVAELGPDA-SSYVHCDVTNEGDVAAAVDHAVARFGKLD 94

Query: 59  IMFNNAGIIS----NMDRTTLDTDNEKVKRVMIMVVFLGV--------------LLFTAN 100
           +MFNNAG+       M   T + D E+V  V ++  FLG               ++ TA+
Sbjct: 95  VMFNNAGVSGPPCFRMSECTKE-DFERVLAVNLVGPFLGTKHAARVMAPARRGSIISTAS 153

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           L++   G A + Y  SK+A++G  +N   ELG++ IRVN ++    ATP    AMG+D +
Sbjct: 154 LSSSVSGAASHAYTTSKHALVGFTENAAGELGRHGIRVNCVSPAGVATPLARAAMGMDDE 213

Query: 161 TFKELLYASANLKGV-VLKAAD 181
             + ++  SANLKG   LKA D
Sbjct: 214 AIEAIMANSANLKGAGALKADD 235

Involved in momilactone phytoalexins biosynthesis. Catalyzes the last step of momilactone A biosynthesis.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 9

EC: 5

>sp|Q9SCU0|SDR2A_ARATH Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana GN=SDR2a PE=3 SV=1

 Score =  101 bits (252), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 115/218 (52%), Gaps = 40/218 (18%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDE---LISYVCCNVTIDSDVKNVFDFT--KFG 55
           +F +H A V+IADV +    +L K   S +   +++++ C+V++++DV+N+ + T  ++G
Sbjct: 53  LFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYG 112

Query: 56  KLDIMFNNAGIISNM--DRTTLDTDNEKV------------------KRVMIMVVFLGVL 95
           +LDI+FNNAG++ +    ++ LD D ++                    R MI   F G +
Sbjct: 113 RLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNVRGVGLGMKHGARAMIKRGFKGCI 172

Query: 96  LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
           + TA++A    G   + Y  SK+A++GL KN   ELG+Y IRVN I+    AT    NA 
Sbjct: 173 ISTASVAGVMGGMGPHAYTASKHAIVGLTKNAACELGKYGIRVNCISPFGVATSMLVNAW 232

Query: 156 GIDKKT------------FKELLYASANLKGVVLKAAD 181
              +KT             +E + + ANLKG  L+A D
Sbjct: 233 ---RKTSGGDVEDDDVEEMEEFVRSLANLKGETLRAND 267

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F1SWA0|ZERSY_ZINZE Zerumbone synthase OS=Zingiber zerumbet GN=ZSD1 PE=1 SV=1

 Score =  100 bits (248), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 68/206 (33%), Positives = 108/206 (52%), Gaps = 25/206 (12%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +FI+H AK+ I DVQD+L + + +    D    Y  C+VT++ DV+   DFT  K+G +D
Sbjct: 24  LFIEHGAKICIVDVQDELGQQVSQRLGGDPHACYFHCDVTVEDDVRRAVDFTAEKYGTID 83

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGV--------------LLFTANL 101
           IM NNAGI  +      D D  + K+V    +  VFLG+              ++  A++
Sbjct: 84  IMVNNAGITGDKVIDIRDADFNEFKKVFDINVNGVFLGMKHAARIMIPKMKGSIVSLASV 143

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT----PFFCNA-MG 156
           ++   G   + Y  +K+AV+GL K++  ELG++ IRVN ++     T    P+   + M 
Sbjct: 144 SSVIAGAGPHGYTGAKHAVVGLTKSVAAELGRHGIRVNCVSPYAVPTRLSMPYLPESEMQ 203

Query: 157 IDK-KTFKELLYASANLKGVVLKAAD 181
            D  + F   + ++ANLKGV L   D
Sbjct: 204 EDALRGFLTFVRSNANLKGVDLMPND 229

Catalyzes 8-hydroxy-alpha-humulene into zerumbone in presence of NAD. Also converts borneol to camphor in vitro. Zerumbone is a highly promising multi-anticancer agent.

Zingiber zerumbet (taxid: 311405)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 3

EC: 2

EC: 6

>sp|O80713|SDR3A_ARATH Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana GN=SDR3a PE=2 SV=1

 Score = 99.0 bits (245), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 109/202 (53%), Gaps = 29/202 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F  H AKV+I D Q++L + +      D+  S+  C+VT + +V+N   FT  K+GKLD
Sbjct: 27  LFTDHGAKVVIVDFQEELGQNVAVSVGKDKA-SFYRCDVTNEKEVENAVKFTVEKYGKLD 85

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVV-----FL-------------GVLLFTAN 100
           ++F+NAG++     + LD + E+  R M + V     F+             G ++ T +
Sbjct: 86  VLFSNAGVMEQPG-SFLDLNLEQFDRTMAVNVRGAAAFIKHAARAMVEKGTRGSIVCTTS 144

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           +A+E  G   + Y  SK+A+LGL+K+ C  LG+Y IRVN +A    AT         D++
Sbjct: 145 VASEIGGPGPHAYTASKHALLGLVKSACGGLGKYGIRVNGVAPYAVATAINSR----DEE 200

Query: 161 TFK---ELLYASANLKGVVLKA 179
           T +   E   A+  LKGVVLKA
Sbjct: 201 TVRMVEEYSAATGILKGVVLKA 222

Confers resistance to the incompatible pathogenic bacteria P.syringae pv. tomato DC3000 in a PR1-dependent manner. Seems not involved in abscisic acid (ABA) biosynthesis.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|O80714|SDR3C_ARATH Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana GN=SDR3c PE=3 SV=1

 Score = 98.2 bits (243), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 66/200 (33%), Positives = 113/200 (56%), Gaps = 24/200 (12%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F  H AKV+I DVQ++L + +      D+  S+  C+VT +++V++   FT  K GKLD
Sbjct: 27  LFTDHGAKVVIVDVQEELGQNVAVLIGKDKA-SFYRCDVTNETEVEDAVKFTVEKHGKLD 85

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVV-----FL-------------GVLLFTAN 100
           ++F+NAG++  ++ + LD D E+  R+M + V     F+             G ++ T +
Sbjct: 86  VLFSNAGVLEPLE-SFLDFDLERFDRIMAVNVRGAAAFIKHAARAMVEKGTRGSIVCTTS 144

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           ++ E IG   + Y  SK+ ++GL+++ C +LG+Y IRVN +A    ATP   +   +  K
Sbjct: 145 VSAE-IGGGHHGYTASKHGLVGLIRSACGDLGKYGIRVNGVAPYAVATPMTSHDE-VTGK 202

Query: 161 TFKELLYASANLKGVVLKAA 180
             ++   A   LKG+VLKA+
Sbjct: 203 QLEDYFDAKGILKGMVLKAS 222

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|F4J300|SDR5_ARATH Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana GN=SDR5 PE=2 SV=1

 Score = 93.2 bits (230), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/202 (33%), Positives = 108/202 (53%), Gaps = 29/202 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F  H AKV+I D+Q++L + +      D+  S+  C++T +++V+N   FT  K GKLD
Sbjct: 27  LFTDHGAKVVIVDLQEELGQNVAVSIGLDKA-SFYRCDITDETEVENAVKFTVEKHGKLD 85

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVV-----FL-------------GVLLFTAN 100
           ++F+NAG++     + LD D E   R M + V     F+             G ++ T +
Sbjct: 86  VLFSNAGVMEPHG-SILDLDLEAFDRTMAVNVRGAAAFIKHAARSMVASGTRGSIVCTTS 144

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           +  E  G   + Y  SK+A+LGL+++ C  LG+Y IRVN +A    AT         +++
Sbjct: 145 VTAEIGGPGPHSYTASKHALLGLVRSACGGLGKYGIRVNGVAPYGVATGLTS----YNEE 200

Query: 161 TFK---ELLYASANLKGVVLKA 179
           T K   +   A+A LKGVVLKA
Sbjct: 201 TVKMVEDYCSATAILKGVVLKA 222

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: -

>sp|Q9C826|ABA2_ARATH Xanthoxin dehydrogenase OS=Arabidopsis thaliana GN=ABA2 PE=1 SV=1

 Score = 84.3 bits (207), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 30/210 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEF---DSDELISYVCCNVTIDSDVKNVFDFT--KFG 55
           +F +H AKV I D+QDDL   +CK     +S E   ++  +V ++ D+ N  DF    FG
Sbjct: 39  LFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFG 98

Query: 56  KLDIMFNNAGI-------ISNMDRT----TLDTD-------NEKVKRVMIMVVFLGVLLF 97
            LDI+ NNAG+       I N   +    T D +        +   RVMI     G ++ 
Sbjct: 99  TLDILINNAGLCGAPCPDIRNYSLSEFEMTFDVNVKGAFLSMKHAARVMIPEK-KGSIVS 157

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI 157
             ++     G   + Y+ SK+AVLGL +++  ELGQ+ IRVN ++    AT      +  
Sbjct: 158 LCSVGGVVGGVGPHSYVGSKHAVLGLTRSVAAELGQHGIRVNCVSPYAVATKLALAHLPE 217

Query: 158 DKKT------FKELLYASANLKGVVLKAAD 181
           +++T      F+    A+ANLKGV L   D
Sbjct: 218 EERTEDAFVGFRNFAAANANLKGVELTVDD 247

Involved in the biosynthesis of abscisic acid.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 8

EC: 8

>sp|P50160|TS2_MAIZE Sex determination protein tasselseed-2 OS=Zea mays GN=TS2 PE=2 SV=1

 Score = 80.5 bits (197), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 85/178 (47%), Gaps = 25/178 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT---KFGKL 57
           +F +H A+V+IAD+ D    AL         +S+V C+V+++ DV+   D+      G+L
Sbjct: 74  LFAKHGARVVIADIDDAAGEALASALGPQ--VSFVRCDVSVEDDVRRAVDWALSRHGGRL 131

Query: 58  DIMFNNAGIISNMDRTTLD------TDNEKVKRVMIMVVFLGV--------------LLF 97
           D+  NNAG++    R           + ++V RV  +   LG+              ++ 
Sbjct: 132 DVYCNNAGVLGRQTRAARSILSFDAAEFDRVLRVNALGAALGMKHAARAMAPRRAGSIVS 191

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
            A++A    G   + Y  SK+A++GL KN   EL  + +RVN ++    ATP   NA 
Sbjct: 192 VASVAAVLGGLGPHAYTASKHAIVGLTKNAACELRAHGVRVNCVSPFGVATPMLINAW 249

Required for stage-specific floral organ abortion.

Zea mays (taxid: 4577)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
224091933	277	predicted protein [Populus trichocarpa]	1.0	0.653	0.505	1e-46
255578629	340	short chain alcohol dehydrogenase, putat	1.0	0.532	0.51	1e-46
449451285	284	PREDICTED: zerumbone synthase-like [Cucu	1.0	0.637	0.475	8e-46
449527939	281	PREDICTED: zerumbone synthase-like, part	1.0	0.644	0.475	1e-45
359482034	280	PREDICTED: momilactone A synthase-like [	0.961	0.621	0.518	1e-45
224140059	279	predicted protein [Populus trichocarpa]	1.0	0.648	0.475	7e-43
224091925	271	predicted protein [Populus trichocarpa]	1.0	0.667	0.475	2e-41
255571939	282	short chain alcohol dehydrogenase, putat	1.0	0.641	0.460	3e-40
255578619	282	short chain alcohol dehydrogenase, putat	1.0	0.641	0.450	7e-40
359482038	422	PREDICTED: momilactone A synthase-like [	1.0	0.428	0.437	6e-38

>gi|224091933|ref|XP_002309405.1| predicted protein [Populus trichocarpa] gi|222855381|gb|EEE92928.1| predicted protein [Populus trichocarpa]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 101/200 (50%), Positives = 133/200 (66%), Gaps = 19/200 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLD 58
           +F++H A VIIADVQD + ++LCKE  ++  + YV C+VT D+DVKNV DF  +K+GKLD
Sbjct: 35  LFVEHGANVIIADVQDQVGQSLCKELGTENNVYYVHCDVTSDTDVKNVVDFAISKYGKLD 94

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRV-----------------MIMVVFLGVLLFTANL 101
           IM+NNAGI  N+D T L T+NE  KRV                 +++ V  GV+LFT+++
Sbjct: 95  IMYNNAGITGNIDPTILGTENENFKRVFEVNVYGGFLGAKHAARVMIPVKKGVILFTSSV 154

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+   GE+ + Y MSK+AV+GLMKNLCVELGQY IRVN I+    ATP   NAMG DK  
Sbjct: 155 ASMACGESPHAYTMSKHAVVGLMKNLCVELGQYGIRVNCISPCALATPLLRNAMGADKSF 214

Query: 162 FKELLYASANLKGVVLKAAD 181
            + ++  SANLKGVV    D
Sbjct: 215 VEHVVCESANLKGVVPSPKD 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578629|ref|XP_002530176.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223530337|gb|EEF32231.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  191 bits (484), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 102/200 (51%), Positives = 132/200 (66%), Gaps = 19/200 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLD 58
           +F Q+ AKVIIAD+Q+ L ++LC+E   D  +SYV C+VT D DVKN+ DF  +K+GKLD
Sbjct: 36  LFAQNGAKVIIADIQESLGQSLCQEIGKDGNVSYVHCDVTSDKDVKNIVDFAMSKYGKLD 95

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANL 101
           IM+NNAGI  N D T L TDNE  KRV  + V+                  GV+LFT+++
Sbjct: 96  IMYNNAGISGNNDPTILGTDNENFKRVFEINVYGGFLGAKHAARVMIPAKKGVILFTSSV 155

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+   GE+ + Y MSK+AV+GLMKNLCVELGQY +RVN I+    ATP   NAMG DK  
Sbjct: 156 ASVNCGESPHAYTMSKHAVVGLMKNLCVELGQYGVRVNCISPCALATPLLRNAMGTDKSF 215

Query: 162 FKELLYASANLKGVVLKAAD 181
            + ++ ASANLKGVV +  D
Sbjct: 216 VEHVVCASANLKGVVPQPED 235

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449451285|ref|XP_004143392.1| PREDICTED: zerumbone synthase-like [Cucumis sativus]

 Score =  188 bits (477), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 19/200 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F+QH A+V++ADVQD+L + LCKE  S+E +SY+ C+VT DSDVK   DF   ++GKLD
Sbjct: 32  LFVQHGARVVLADVQDNLAQPLCKELGSEETVSYIHCDVTRDSDVKEAVDFAVERYGKLD 91

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANL 101
           IM+NNAGI   MD T L T+ E  K+V  + V+                  GV+LFT+++
Sbjct: 92  IMYNNAGITGQMDPTILGTNGENFKKVFEVNVYGGFLGAKHAARVMIPNRSGVILFTSSV 151

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+   GE+ + Y MSK+AV+GLM+NLCVELG++ IRVNS++    ATP   NA+G  +K 
Sbjct: 152 ASVNSGESPHAYAMSKHAVVGLMRNLCVELGEFGIRVNSVSPGAIATPLLRNALGFTEKE 211

Query: 162 FKELLYASANLKGVVLKAAD 181
            +E++ +SA LKGVV  A D
Sbjct: 212 LEEVVRSSAILKGVVATAED 231

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449527939|ref|XP_004170965.1| PREDICTED: zerumbone synthase-like, partial [Cucumis sativus]

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 19/200 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F+QH A+V++ADVQD+L + LCKE  S+E +SY+ C+VT DSDVK   DF   ++GKLD
Sbjct: 32  LFVQHGARVVLADVQDNLAQPLCKELGSEETVSYIHCDVTRDSDVKEAVDFAVERYGKLD 91

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANL 101
           IM+NNAGI   MD T L T+ E  K+V  + V+                  GV+LFT+++
Sbjct: 92  IMYNNAGITGQMDPTILGTNGENFKKVFEVNVYGGFLGAKHAARVMIPNRSGVILFTSSV 151

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+   GE+ + Y MSK+AV+GLM+NLCVELG++ IRVNS++    ATP   NA+G  +K 
Sbjct: 152 ASVNSGESPHAYAMSKHAVVGLMRNLCVELGEFGIRVNSVSPGAIATPLLRNALGFTEKE 211

Query: 162 FKELLYASANLKGVVLKAAD 181
            +E++ +SA LKGVV  A D
Sbjct: 212 LEEVVRSSAILKGVVATAED 231

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482034|ref|XP_002275746.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  187 bits (475), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 100/193 (51%), Positives = 131/193 (67%), Gaps = 19/193 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
           +F++H AKVIIADVQDD+  ++C+   S    S+V C+VT DSDVKNV D   +K+GKLD
Sbjct: 35  LFVRHGAKVIIADVQDDIGLSICEALGSHGTASFVHCDVTSDSDVKNVVDTAVSKYGKLD 94

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLG--------------VLLFTANL 101
           IMFNNAGI  N+D T L T+NE  +RV    +   FLG              V+LFT+++
Sbjct: 95  IMFNNAGISGNLDPTILGTENENFRRVFDVNVYGAFLGAKHAARVMIPAKKGVILFTSSV 154

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+ T GE+ + Y MSK+AV+GL KNLCVELGQ+ IRVN I+    ATP   NAMG++KKT
Sbjct: 155 ASVTSGESPHAYTMSKHAVVGLTKNLCVELGQHGIRVNCISPCAIATPLLRNAMGLEKKT 214

Query: 162 FKELLYASANLKG 174
            + ++ ASANLKG
Sbjct: 215 VEGIVCASANLKG 227

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224140059|ref|XP_002323404.1| predicted protein [Populus trichocarpa] gi|222868034|gb|EEF05165.1| predicted protein [Populus trichocarpa]

 Score =  178 bits (452), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 133/200 (66%), Gaps = 19/200 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
           +F+QH +KV+IADVQDDL RALC+E+ S+E+ISYV CNVT+DSDV+N  D   +++GKLD
Sbjct: 35  LFVQHGSKVLIADVQDDLGRALCQEYGSEEIISYVHCNVTVDSDVQNAVDTAVSRYGKLD 94

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVV---FLGV--------------LLFTANL 101
           IMFNNAGI  N   + L++DNE   RV+ + V   FLG               +LFTA++
Sbjct: 95  IMFNNAGISGNTKSSILNSDNEDFMRVLNINVCGGFLGAKHAARVMIPAKKGCILFTASV 154

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+   GE  + Y  SK A++GL KNL V+LGQ+ IRVNSI+    ATP   +A+ + K+ 
Sbjct: 155 ASVLYGELAHAYTASKNAIVGLAKNLSVDLGQHGIRVNSISPTAVATPMLTDALRMTKEA 214

Query: 162 FKELLYASANLKGVVLKAAD 181
            ++ + ++ANLK  VL+  D
Sbjct: 215 AEKFVASAANLKEAVLEPED 234

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224091925|ref|XP_002309402.1| predicted protein [Populus trichocarpa] gi|222855378|gb|EEE92925.1| predicted protein [Populus trichocarpa]

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/200 (47%), Positives = 124/200 (62%), Gaps = 19/200 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F+QH AKV+IAD+QDDL  + C+EF   E ISYV CNVT DSDV+N  D    K+GKLD
Sbjct: 27  LFVQHGAKVLIADIQDDLGHSFCQEFGPQETISYVHCNVTCDSDVQNAVDTAVFKYGKLD 86

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVL-----------------LFTANL 101
           IMFNNAGI  +     L  DNE  KRV+ + V+ G L                 LFT+++
Sbjct: 87  IMFNNAGIPGDRKSGILTCDNENFKRVLDVNVYGGFLGAKHAARVMIPAKKGCILFTSSV 146

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           A+   GE  + Y  SK A++GL KNLCVELGQY IRVNSI+    ATP   + + + K+ 
Sbjct: 147 ASVLYGELAHAYTASKNAIVGLAKNLCVELGQYGIRVNSISPYAVATPLLTDGLSMTKEA 206

Query: 162 FKELLYASANLKGVVLKAAD 181
            +EL+ ++A LK VVL+  D
Sbjct: 207 AEELVASAATLKDVVLEPED 226

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255571939|ref|XP_002526911.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223533730|gb|EEF35464.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  169 bits (429), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 94/204 (46%), Positives = 135/204 (66%), Gaps = 23/204 (11%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKL 57
           +F++H AKV++ADVQD+L  +LCKE  SD E+ISY+ C+VT DSDV+N  DF  +K+GKL
Sbjct: 35  LFVKHGAKVVVADVQDELGYSLCKELGSDQEIISYIHCDVTCDSDVQNAVDFAVSKYGKL 94

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTAN 100
           DIMF+NAG+  N+  + +DT+NE  KRV  + VF                  G +LFT +
Sbjct: 95  DIMFSNAGVAGNVYPSIVDTENEDFKRVFDINVFGAFLAAKHAARVMIPAKKGCILFTCS 154

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI--- 157
             + +  +A++ Y+ SK+A+LGL KNL VELGQ+ IRVN ++  V  TP    AMG+   
Sbjct: 155 YLSVSCFQAIHPYVASKHAILGLSKNLSVELGQHGIRVNCVSPFVVITPMMRKAMGVMEA 214

Query: 158 DKKTFKELLYASANLKGVVLKAAD 181
           +K+  +E++ ASANLK V+L+A D
Sbjct: 215 EKEKLQEVVSASANLKNVMLEAED 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255578619|ref|XP_002530171.1| short chain alcohol dehydrogenase, putative [Ricinus communis] gi|223530332|gb|EEF32226.1| short chain alcohol dehydrogenase, putative [Ricinus communis]

 Score =  168 bits (426), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 133/204 (65%), Gaps = 23/204 (11%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKL 57
           +F++H AKV++ADVQD+L  +LC+E   D E+ISY+ C+VT DSDV+N  DF  +K+GKL
Sbjct: 35  LFVKHGAKVVVADVQDELGHSLCRELGPDQEIISYIHCDVTCDSDVQNAVDFAVSKYGKL 94

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTAN 100
           DIMF+NAG+  N+  + +DT+NE  KRV  + VF                  G +LFT +
Sbjct: 95  DIMFSNAGVAGNVYPSIVDTENEDFKRVFDINVFGAFLAAKHAARVMIPAKKGCILFTCS 154

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI--- 157
             + +  +A++ Y+ SK+A+LGL KNL VELGQ+ IRVN ++  V  TP    AMG+   
Sbjct: 155 YLSVSCFQAIHPYVASKHAILGLSKNLSVELGQHGIRVNCVSPFVVITPMMRKAMGVMEA 214

Query: 158 DKKTFKELLYASANLKGVVLKAAD 181
           +K+  +E++ ASANLK V L+A D
Sbjct: 215 EKEKLQEVVSASANLKNVTLEAED 238

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|359482038|ref|XP_002281320.2| PREDICTED: momilactone A synthase-like [Vitis vinifera]

 Score =  162 bits (409), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 88/201 (43%), Positives = 126/201 (62%), Gaps = 20/201 (9%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
           +F++H AKVI+ADVQD L R+LC+E    E + +V C+VT DSDV+N  D   +K+GKLD
Sbjct: 172 LFVKHGAKVIVADVQDQLGRSLCQEIGPAETVFHVHCDVTCDSDVQNAVDTAISKYGKLD 231

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANL 101
           IMF+NAG+   M+   + +DN   KRV  + V+                  G ++FT+++
Sbjct: 232 IMFSNAGVHGEMESRIILSDNTNFKRVFDVNVYGAFLAAKHAARVMIPAKTGCIIFTSSV 291

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI-DKK 160
           A+    E  + Y+ SK+AV+GL  NLCVELGQY IRVN I+    ATP     +GI +K+
Sbjct: 292 ASVVSEEISHAYVASKHAVVGLANNLCVELGQYGIRVNCISPFGVATPMLQKGLGIMEKR 351

Query: 161 TFKELLYASANLKGVVLKAAD 181
             +EL+ ++ANLKG VL+A D
Sbjct: 352 KVEELVSSAANLKGAVLEAED 372

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	181
TAIR|locus:2088399	306	AT3G26770 [Arabidopsis thalian	0.502	0.297	0.353	1.7e-19
UNIPROTKB|Q5C9I9	265	Q5C9I9 "(-)-isopiperitenol deh	0.546	0.373	0.336	1.1e-18
TAIR|locus:2041394	257	SDR5 "short-chain dehydrogenas	0.530	0.373	0.406	1.6e-13
TAIR|locus:2094807	298	SDR4 "short-chain dehydrogenas	0.569	0.345	0.370	1.2e-11
TAIR|locus:2098287	303	SDR2 "short-chain dehydrogenas	0.679	0.405	0.312	1.6e-11
TAIR|locus:2041449	258	AT2G47120 [Arabidopsis thalian	0.751	0.527	0.292	5.2e-11
TAIR|locus:2041439	257	SDR3 "short-chain dehydrogenas	0.546	0.385	0.346	9.8e-10
TAIR|locus:2094822	259	AT3G29260 [Arabidopsis thalian	0.569	0.397	0.333	1e-09
TAIR|locus:2125452	343	AT4G03140 [Arabidopsis thalian	0.779	0.411	0.322	3.8e-09
TAIR|locus:2018149	285	ABA2 "ABA DEFICIENT 2" [Arabid	0.364	0.231	0.408	4.8e-08

TAIR|locus:2088399 AT3G26770 [Arabidopsis thaliana (taxid:3702)]

 Score = 156 (60.0 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
 Identities = 35/99 (35%), Positives = 60/99 (60%)

Query:     2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
             F++H A+V+IAD+  +      KE  S+    +V C+VT+++D+    + T  ++GKLD+
Sbjct:    63 FLRHGARVVIADLDAETGTKTAKELGSEA--EFVRCDVTVEADIAGAVEMTVERYGKLDV 120

Query:    60 MFNNAGIISNMDRTT---LD-TDNEKVKRVMIMVVFLGV 94
             M+NNAGI+  M   +   LD T+ E+V R+ +  V  G+
Sbjct:   121 MYNNAGIVGPMTPASISQLDMTEFERVMRINVFGVVSGI 159

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010089 "xylem development" evidence=RCA

GO:0044036 "cell wall macromolecule metabolic process" evidence=RCA

UNIPROTKB|Q5C9I9 Q5C9I9 "(-)-isopiperitenol dehydrogenase" [Mentha x piperita (taxid:34256)]

 Score = 132 (51.5 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
 Identities = 34/101 (33%), Positives = 54/101 (53%)

Query:    80 EKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN 139
             ++  R M+ +   G ++ TA+      G  L DY+MSK  VLGL+++  ++LG + IRVN
Sbjct:   127 KQAARKMVELGRGGAIICTASATVHHAGPNLTDYIMSKCGVLGLVRSASLQLGVHGIRVN 186

Query:   140 SIAHIVSATPFFCNAMGIDKKTFKELLYASA-NLKGVVLKA 179
             S++    ATP     +G+      E  Y    +LKGV + A
Sbjct:   187 SVSPTALATPLTAT-IGLRTAADVESFYGQVTSLKGVAITA 226

GO:0000166 "nucleotide binding" evidence=IDA

GO:0018458 "isopiperitenol dehydrogenase activity" evidence=IDA

GO:0018459 "carveol dehydrogenase activity" evidence=IDA

GO:0031525 "menthol biosynthetic process" evidence=IDA

TAIR|locus:2041394 SDR5 "short-chain dehydrogenase reductase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 176 (67.0 bits), Expect = 1.6e-13, P = 1.6e-13
 Identities = 39/96 (40%), Positives = 56/96 (58%)

Query:    84 RVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH 143
             R M+     G ++ T ++A E  G A + Y  SK+ +LGL+K+    LG+Y IRVN +A 
Sbjct:   128 RAMVEKGIRGSIVCTTSVAAEIAGTAPHGYTTSKHGLLGLIKSASGGLGKYGIRVNGVAP 187

Query:   144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKA 179
                ATP  CN   ++    ++   ASANLKG+VLKA
Sbjct:   188 FGVATPLVCNGFKMEPNVVEQNTSASANLKGIVLKA 223

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2094807 SDR4 "short-chain dehydrogenase reductase 4" [Arabidopsis thaliana (taxid:3702)]

 Score = 162 (62.1 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 40/108 (37%), Positives = 60/108 (55%)

Query:     1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             +F  H AKV+I D+Q++L + L      D+  S+  CNVT ++DV+N   FT  K GKLD
Sbjct:    65 LFTDHGAKVVIVDIQEELGQNLAVSIGLDKA-SFYRCNVTDETDVENAVKFTVEKHGKLD 123

Query:    59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETI 106
             ++F+NAG++     + LD D E   R M + V  G   F  + A   +
Sbjct:   124 VLFSNAGVLEAFG-SVLDLDLEAFDRTMAVNV-RGAAAFIKHAARSMV 169

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005576 "extracellular region" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0005507 "copper ion binding" evidence=IDA

TAIR|locus:2098287 SDR2 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 161 (61.7 bits), Expect = 1.6e-11, P = 1.6e-11
 Identities = 41/131 (31%), Positives = 77/131 (58%)

Query:     1 VFIQHRAKVIIADVQDDLCRALCKEFDSDE---LISYVCCNVTIDSDVKNVFDFT--KFG 55
             +F +H A V+IADV +    +L K   S +   +++++ C+V++++DV+N+ + T  ++G
Sbjct:    53 LFARHGATVVIADVDNVAGSSLAKSLSSHKTSPMVAFISCDVSVEADVENLVNVTVARYG 112

Query:    56 KLDIMFNNAGIISNMDR--TTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDY 113
             +LDI+FNNAG++ +  +  + LD D ++   VM + V  GV L   + A   I       
Sbjct:   113 RLDILFNNAGVLGDQKKHKSILDFDADEFDHVMRVNV-RGVGLGMKHGARAMIKRGFKGC 171

Query:   114 LMSKYAVLGLM 124
             ++S  +V G+M
Sbjct:   172 IISTASVAGVM 182

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041449 AT2G47120 [Arabidopsis thaliana (taxid:3702)]

 Score = 154 (59.3 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 46/157 (29%), Positives = 82/157 (52%)

Query:    41 IDSDVKNVFDFTKFGKLDIMFNNAGIISNMDR-TTLDTDN-EKVKRVMIM--VVFL---- 92
             ++  VK  F   K GKLD++F+NAG++  ++     D +  +++  V +     F+    
Sbjct:    70 VEDAVK--FTVEKHGKLDVLFSNAGVLEPLESFLDFDLERFDRIMAVNVRGAAAFIKHAA 127

Query:    93 ---------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH 143
                      G ++ T +++ E IG   + Y  SK+ ++GL+++ C +LG+Y IRVN +A 
Sbjct:   128 RAMVEKGTRGSIVCTTSVSAE-IGGGHHGYTASKHGLVGLIRSACGDLGKYGIRVNGVAP 186

Query:   144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA 180
                ATP   +   +  K  ++   A   LKG+VLKA+
Sbjct:   187 YAVATPMTSHDE-VTGKQLEDYFDAKGILKGMVLKAS 222

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2041439 SDR3 "short-chain dehydrogenase/reductase 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 9.8e-10, P = 9.8e-10
 Identities = 36/104 (34%), Positives = 59/104 (56%)

Query:     1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             +F  H AKV+I D Q++L + +      D+  S+  C+VT + +V+N   FT  K+GKLD
Sbjct:    27 LFTDHGAKVVIVDFQEELGQNVAVSVGKDKA-SFYRCDVTNEKEVENAVKFTVEKYGKLD 85

Query:    59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLA 102
             ++F+NAG++     + LD + E+  R M + V  G   F  + A
Sbjct:    86 VLFSNAGVMEQPG-SFLDLNLEQFDRTMAVNV-RGAAAFIKHAA 127

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0042742 "defense response to bacterium" evidence=IMP

TAIR|locus:2094822 AT3G29260 [Arabidopsis thaliana (taxid:3702)]

 Score = 143 (55.4 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 36/108 (33%), Positives = 60/108 (55%)

Query:     1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             +F  H AKV+I D+Q++L + +      D+  S+  C++T +++V+N   FT  K GKLD
Sbjct:    27 LFTDHGAKVVIVDLQEELGQNVAVSIGLDKA-SFYRCDITDETEVENAVKFTVEKHGKLD 85

Query:    59 IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETI 106
             ++F+NAG++     + LD D E   R M + V  G   F  + A   +
Sbjct:    86 VLFSNAGVMEPHG-SILDLDLEAFDRTMAVNV-RGAAAFIKHAARSMV 131

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2125452 AT4G03140 [Arabidopsis thaliana (taxid:3702)]

 Score = 141 (54.7 bits), Expect = 3.8e-09, P = 3.8e-09
 Identities = 48/149 (32%), Positives = 72/149 (48%)

Query:     2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDI 59
             FI H AKVIIAD+Q  + R   +E       +Y  C+VT +SD+ N  DF  +   KLDI
Sbjct:   100 FISHGAKVIIADIQPQIGRETEQELGPS--CAYFPCDVTKESDIANAVDFAVSLHTKLDI 157

Query:    60 MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYA 119
             M+NNAGI      + +D D     +V+   V  GV+    + A   I       + +  +
Sbjct:   158 MYNNAGIPCKTPPSIVDLDLNVFDKVINTNV-RGVMAGIKHAARVMIPRNSGSIICAG-S 215

Query:   120 VLGLMKNLCVELGQYDIRVNSIAHIVSAT 148
             V G+M  L      Y +  +++  IV +T
Sbjct:   216 VTGMMGGLAQHT--YSVSKSAVIGIVRST 242

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

TAIR|locus:2018149 ABA2 "ABA DEFICIENT 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 132 (51.5 bits), Expect = 4.8e-08, P = 4.8e-08
 Identities = 29/71 (40%), Positives = 42/71 (59%)

Query:     1 VFIQHRAKVIIADVQDDLCRALCKEF---DSDELISYVCCNVTIDSDVKNVFDFT--KFG 55
             +F +H AKV I D+QDDL   +CK     +S E   ++  +V ++ D+ N  DF    FG
Sbjct:    39 LFHKHGAKVCIVDLQDDLGGEVCKSLLRGESKETAFFIHGDVRVEDDISNAVDFAVKNFG 98

Query:    56 KLDIMFNNAGI 66
              LDI+ NNAG+
Sbjct:    99 TLDILINNAGL 109

GO:0000166 "nucleotide binding" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA;ISS

GO:0010301 "xanthoxin dehydrogenase activity" evidence=IDA

GO:0004022 "alcohol dehydrogenase (NAD) activity" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0010182 "sugar mediated signaling pathway" evidence=TAS

GO:0009408 "response to heat" evidence=IMP

GO:0009414 "response to water deprivation" evidence=IMP

GO:0010115 "regulation of abscisic acid biosynthetic process" evidence=IMP

GO:0009750 "response to fructose stimulus" evidence=IMP

GO:0009688 "abscisic acid biosynthetic process" evidence=IMP

GO:0006561 "proline biosynthetic process" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	181
cd05326	249	cd05326, secoisolariciresinol-DH_like_SDR_c, secoi	3e-44
PLN02253	280	PLN02253, PLN02253, xanthoxin dehydrogenase	8e-31
cd05233	234	cd05233, SDR_c, classical (c) SDRs	6e-19
PRK05565	247	PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein)	3e-17
PRK07231	251	PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein)	6e-16
cd05341	247	cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta	2e-15
cd05345	248	cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl	1e-14
COG1028	251	COG1028, FabG, Dehydrogenases with different speci	1e-14
PRK12829	264	PRK12829, PRK12829, short chain dehydrogenase; Pro	1e-13
PRK06057	255	PRK06057, PRK06057, short chain dehydrogenase; Pro	4e-13
PRK06172	253	PRK06172, PRK06172, short chain dehydrogenase; Pro	4e-12
cd05364	253	cd05364, SDR_c11, classical (c) SDR, subgroup 11	4e-12
PRK12826	251	PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-prote	5e-12
cd05330	257	cd05330, cyclohexanol_reductase_SDR_c, cyclohexano	9e-12
TIGR03971	265	TIGR03971, SDR_subfam_1, oxidoreductase, SDR famil	2e-11
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	6e-11
cd05347	248	cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogena	7e-11
cd05358	253	cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (Glc	8e-11
PRK05653	246	PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein)	8e-11
cd05365	242	cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroi	4e-10
PRK06200	263	PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydropheny	5e-10
PRK12939	250	PRK12939, PRK12939, short chain dehydrogenase; Pro	1e-09
cd05339	243	cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hy	1e-09
cd08933	261	cd08933, RDH_SDR_c, retinal dehydrogenase-like, cl	2e-09
cd05323	244	cd05323, ADH_SDR_c_like, insect type alcohol dehyd	2e-09
cd05369	249	cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reducta	3e-09
cd08943	250	cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate al	3e-09
PRK07063	260	PRK07063, PRK07063, short chain dehydrogenase; Pro	1e-08
PRK08324	681	PRK08324, PRK08324, short chain dehydrogenase; Val	1e-08
PRK06113	255	PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydro	2e-08
PRK06463	255	PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-08
PRK07774	250	PRK07774, PRK07774, short chain dehydrogenase; Pro	3e-08
PRK12827	249	PRK12827, PRK12827, short chain dehydrogenase; Pro	3e-08
PRK07067	257	PRK07067, PRK07067, sorbitol dehydrogenase; Provis	4e-08
PRK12429	258	PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenas	4e-08
cd05352	252	cd05352, MDH-like_SDR_c, mannitol dehydrogenase (M	5e-08
PRK06171	266	PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydro	6e-08
TIGR01832	248	TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogena	9e-08
PRK05557	248	PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein)	9e-08
PRK08226	263	PRK08226, PRK08226, short chain dehydrogenase; Pro	1e-07
PRK08267	260	PRK08267, PRK08267, short chain dehydrogenase; Pro	1e-07
cd05371	252	cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydr	1e-07
cd05366	257	cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol	1e-07
TIGR02415	254	TIGR02415, 23BDH, acetoin reductases	2e-07
PRK05867	253	PRK05867, PRK05867, short chain dehydrogenase; Pro	2e-07
PRK06138	252	PRK06138, PRK06138, short chain dehydrogenase; Pro	2e-07
PRK06935	258	PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrog	3e-07
PRK07890	258	PRK07890, PRK07890, short chain dehydrogenase; Pro	4e-07
PRK12481	251	PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrog	5e-07
PRK12937	245	PRK12937, PRK12937, short chain dehydrogenase; Pro	6e-07
PRK05650	270	PRK05650, PRK05650, short chain dehydrogenase; Pro	6e-07
PRK09242	257	PRK09242, PRK09242, tropinone reductase; Provision	9e-07
cd05362	243	cd05362, THN_reductase-like_SDR_c, tetrahydroxynap	1e-06
TIGR01830	239	TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier	1e-06
cd08929	226	cd08929, SDR_c4, classical (c) SDR, subgroup 4	2e-06
PRK08213	259	PRK08213, PRK08213, gluconate 5-dehydrogenase; Pro	2e-06
cd05348	257	cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydro	2e-06
cd08944	246	cd08944, SDR_c12, classical (c) SDR, subgroup 12	3e-06
cd05374	248	cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxyster	4e-06
PRK07478	254	PRK07478, PRK07478, short chain dehydrogenase; Pro	5e-06
PRK08085	254	PRK08085, PRK08085, gluconate 5-dehydrogenase; Pro	6e-06
PRK06841	255	PRK06841, PRK06841, short chain dehydrogenase; Pro	6e-06
COG4221	246	COG4221, COG4221, Short-chain alcohol dehydrogenas	6e-06
PRK12743	256	PRK12743, PRK12743, oxidoreductase; Provisional	7e-06
PRK12825	249	PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein)	7e-06
cd05368	241	cd05368, DHRS6_like_SDR_c, human DHRS6-like, class	8e-06
cd08936	256	cd08936, CR_SDR_c, Porcine peroxisomal carbonyl re	8e-06
cd05333	240	cd05333, BKR_SDR_c, beta-Keto acyl carrier protein	8e-06
PRK07060	245	PRK07060, PRK07060, short chain dehydrogenase; Pro	9e-06
PRK08217	253	PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein)	1e-05
cd05329	251	cd05329, TR_SDR_c, tropinone reductase-I and II (T	1e-05
cd05355	270	cd05355, SDR_c1, classical (c) SDR, subgroup 1	2e-05
PRK08993	253	PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrog	2e-05
PRK12384	259	PRK12384, PRK12384, sorbitol-6-phosphate dehydroge	2e-05
cd05324	225	cd05324, carb_red_PTCR-like_SDR_c, Porcine testicu	2e-05
cd05353	250	cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-	2e-05
cd08931	227	cd08931, SDR_c9, classical (c) SDR, subgroup 9	2e-05
cd05363	254	cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH),	3e-05
PRK12935	247	PRK12935, PRK12935, acetoacetyl-CoA reductase; Pro	4e-05
PRK08589	272	PRK08589, PRK08589, short chain dehydrogenase; Val	4e-05
PRK06398	258	PRK06398, PRK06398, aldose dehydrogenase; Validate	5e-05
PRK05872	296	PRK05872, PRK05872, short chain dehydrogenase; Pro	5e-05
PRK07825	273	PRK07825, PRK07825, short chain dehydrogenase; Pro	8e-05
PRK07326	237	PRK07326, PRK07326, short chain dehydrogenase; Pro	1e-04
PRK06124	256	PRK06124, PRK06124, gluconate 5-dehydrogenase; Pro	1e-04
PRK05876	275	PRK05876, PRK05876, short chain dehydrogenase; Pro	1e-04
COG0623	259	COG0623, FabI, Enoyl-[acyl-carrier-protein]	1e-04
PRK06947	248	PRK06947, PRK06947, glucose-1-dehydrogenase; Provi	2e-04
PRK06550	235	PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein)	2e-04
PRK08936	261	PRK08936, PRK08936, glucose-1-dehydrogenase; Provi	2e-04
PRK12828	239	PRK12828, PRK12828, short chain dehydrogenase; Pro	3e-04
cd05322	257	cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehy	3e-04
cd08939	239	cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine	3e-04
cd05340	236	cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-li	4e-04
PRK07831	262	PRK07831, PRK07831, short chain dehydrogenase; Pro	6e-04
PRK06114	254	PRK06114, PRK06114, short chain dehydrogenase; Pro	6e-04
PRK07062	265	PRK07062, PRK07062, short chain dehydrogenase; Pro	8e-04
TIGR02632	676	TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate	0.001
cd05338	246	cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogena	0.001
cd05372	250	cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP)	0.001
PRK07035	252	PRK07035, PRK07035, short chain dehydrogenase; Pro	0.001
PRK07097	265	PRK07097, PRK07097, gluconate 5-dehydrogenase; Pro	0.001
PRK06484	520	PRK06484, PRK06484, short chain dehydrogenase; Val	0.002
TIGR01963	255	TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase	0.002
TIGR02685	267	TIGR02685, pter_reduc_Leis, pteridine reductase	0.002
PRK05855	582	PRK05855, PRK05855, short chain dehydrogenase; Val	0.003
PRK08945	247	PRK08945, PRK08945, putative oxoacyl-(acyl carrier	0.003
PRK06194	287	PRK06194, PRK06194, hypothetical protein; Provisio	0.003
PRK06123	248	PRK06123, PRK06123, short chain dehydrogenase; Pro	0.004
cd05349	246	cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl	0.004

>gnl|CDD|187587 cd05326, secoisolariciresinol-DH_like_SDR_c, secoisolariciresinol dehydrogenase (secoisolariciresinol-DH)-like, classical (c) SDRs

 Score =  146 bits (370), Expect = 3e-44
 Identities = 70/199 (35%), Positives = 112/199 (56%), Gaps = 20/199 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +H A+V+IAD+ DD  +A+  E    + IS+V C+VT+++DV+   D    +FG+LDI
Sbjct: 24  FAKHGARVVIADIDDDAGQAVAAELGDPD-ISFVHCDVTVEADVRAAVDTAVARFGRLDI 82

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVV---FLGV--------------LLFTANLA 102
           MFNNAG++     + L+T  E+ +RV+ + V   FLG               ++  A++A
Sbjct: 83  MFNNAGVLGAPCYSILETSLEEFERVLDVNVYGAFLGTKHAARVMIPAKKGSIVSVASVA 142

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTF 162
               G   + Y  SK+AVLGL ++   ELG++ IRVN ++    ATP      G++ +  
Sbjct: 143 GVVGGLGPHAYTASKHAVLGLTRSAATELGEHGIRVNCVSPYGVATPLLTAGFGVEDEAI 202

Query: 163 KELLYASANLKGVVLKAAD 181
           +E +  +ANLKG  L+  D
Sbjct: 203 EEAVRGAANLKGTALRPED 221

Podophyllum secoisolariciresinol-DH is a homo tetrameric, classical SDR that catalyzes the NAD-dependent conversion of (-)-secoisolariciresinol to (-)-matairesinol via a (-)-lactol intermediate. (-)-Matairesinol is an intermediate to various 8'-lignans, including the cancer-preventive mammalian lignan, and those involved in vascular plant defense. This subgroup also includes rice momilactone A synthase which catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A, Arabidopsis ABA2 which during abscisic acid (ABA) biosynthesis, catalyzes the conversion of xanthoxin to abscisic aldehyde and, maize Tasselseed2 which participate in the maize sex determination pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 249

>gnl|CDD|177895 PLN02253, PLN02253, xanthoxin dehydrogenase

 Score =  112 bits (282), Expect = 8e-31
 Identities = 69/207 (33%), Positives = 106/207 (51%), Gaps = 27/207 (13%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F +H AKV I D+QDDL + +C     +  + +  C+VT++ DV    DFT  KFG LD
Sbjct: 37  LFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96

Query: 59  IMFNNAGI----ISNMDRTTLDTDNEKVKRVMIMVVFLGV--------------LLFTAN 100
           IM NNAG+      ++    L ++ EKV  V +  VFLG+              ++   +
Sbjct: 97  IMVNNAGLTGPPCPDIRNVEL-SEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCS 155

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           +A+   G   + Y  SK+AVLGL +++  ELG++ IRVN ++     T      +  D++
Sbjct: 156 VASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDER 215

Query: 161 T------FKELLYASANLKGVVLKAAD 181
           T      F+     +ANLKGV L   D
Sbjct: 216 TEDALAGFRAFAGKNANLKGVELTVDD 242

Length = 280

>gnl|CDD|212491 cd05233, SDR_c, classical (c) SDRs

 Score = 80.4 bits (199), Expect = 6e-19
 Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 21/155 (13%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           AKV++AD  ++    L            V  +V+ + DV+ + +    +FG+LDI+ NNA
Sbjct: 23  AKVVLADRNEEALAELAAIEALGGNAVAVQADVSDEEDVEALVEEALEEFGRLDILVNNA 82

Query: 65  GIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATETIG 107
           GI         +  +E   RV+   +  VFL              G ++  +++A     
Sbjct: 83  GIAR--PGPLEELTDEDWDRVLDVNLTGVFLLTRAALPHMKKQGGGRIVNISSVAGLRPL 140

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                Y  SK A+ GL ++L +EL  Y IRVN++A
Sbjct: 141 PGQAAYAASKAALEGLTRSLALELAPYGIRVNAVA 175

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human prostaglandin dehydrogenase (PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, PGDH numbering) and/or an Asn (Asn-107, PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 234

>gnl|CDD|235506 PRK05565, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 76.0 bits (188), Expect = 3e-17
 Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 29/165 (17%)

Query: 2   FIQHRAKVIIA-DVQDDLCRALCKEFDSDELISYVC-CNVTIDSDVKNVFDFT--KFGKL 57
             +  AKV+IA D+ ++  + L +E   +   +     +V+ + DV+N+ +    KFGK+
Sbjct: 25  LAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG---------- 107
           DI+ NNAGI SN      D  +E+  R +I V   GV+L T       I           
Sbjct: 85  DILVNNAGI-SNF-GLVTDMTDEEWDR-VIDVNLTGVMLLTRYALPYMIKRKSGVIVNIS 141

Query: 108 ----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                     E LY    SK AV    K L  EL    IRVN++A
Sbjct: 142 SIWGLIGASCEVLYS--ASKGAVNAFTKALAKELAPSGIRVNAVA 184

Length = 247

>gnl|CDD|235975 PRK07231, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 72.6 bits (179), Expect = 6e-16
 Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 20/176 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F    A+V++ D  ++    +  E  +      V  +V+ ++DV+        +FG +DI
Sbjct: 25  FAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDI 84

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLF--------------TANLA 102
           + NNAG  ++ +   LD D  +  R+    +   +L                    A+ A
Sbjct: 85  LVNNAGT-THRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTA 143

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID 158
                  L  Y  SK AV+ L K L  ELG   IRVN++A +V  T      MG  
Sbjct: 144 GLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEP 199

Length = 251

>gnl|CDD|187600 cd05341, 3beta-17beta-HSD_like_SDR_c, 3beta17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 70.9 bits (174), Expect = 2e-15
 Identities = 47/164 (28%), Positives = 75/164 (45%), Gaps = 25/164 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           AKV+++D+ D+  +A   E    +   +   +VT +     V D     FG+LD++ NNA
Sbjct: 30  AKVVLSDILDEEGQAAAAELG--DAARFFHLDVTDEDGWTAVVDTAREAFGRLDVLVNNA 87

Query: 65  GIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLFTA-----------NLATET--IGE 108
           GI++    T   T  E+ +R++   +  VFLG                 N+++    +G+
Sbjct: 88  GILTGG--TVETTTLEEWRRLLDINLTGVFLGTRAVIPPMKEAGGGSIINMSSIEGLVGD 145

Query: 109 ALY-DYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIAHIVSATP 149
                Y  SK AV GL K+  +E     Y IRVNS+      TP
Sbjct: 146 PALAAYNASKGAVRGLTKSAALECATQGYGIRVNSVHPGYIYTP 189

This subgroup includes members identified as 3beta17beta hydroxysteroid dehydrogenase, 20beta hydroxysteroid dehydrogenase, and R-alcohol dehydrogenase. These proteins exhibit the canonical active site tetrad and glycine rich NAD(P)-binding motif of the classical SDRs. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 247

>gnl|CDD|187603 cd05345, BKR_3_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP] reductase (BKR), subgroup 3, classical (c) SDR

 Score = 69.3 bits (170), Expect = 1e-14
 Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 20/176 (11%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
            F Q  A+V+IAD+  D    +    D  E    +  +VT  +DV+ + +   +KFG+LD
Sbjct: 24  RFAQEGARVVIADINADGAERVAA--DIGEAAIAIQADVTKRADVEAMVEAALSKFGRLD 81

Query: 59  IMFNNAGII-SNMDRTTLDTDN-EKVKRVMIMVVFL--------------GVLLFTANLA 102
           I+ NNAGI   N     +D +  ++V  V +  ++L              GV++  A+ A
Sbjct: 82  ILVNNAGITHRNKPMLEVDEEEFDRVFAVNVKSIYLSAQALVPHMEEQGGGVIINIASTA 141

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID 158
                  L  Y  SK  V+   K + VEL   +IRVN +  +   TP     MG D
Sbjct: 142 GLRPRPGLTWYNASKGWVVTATKAMAVELAPRNIRVNCLCPVAGETPLLSMFMGED 197

This subgroup includes the putative Brucella melitensis biovar Abortus 2308 BKR, FabG, Mesorhizobium loti MAFF303099 FabG, and other classical SDRs. BKR, a member of the SDR family, catalyzes the NADPH-dependent reduction of acyl carrier protein in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of 4 elongation steps, which are repeated to extend the fatty acid chain thru the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I Fas utilizes one or 2 multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 248

>gnl|CDD|223959 COG1028, FabG, Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

 Score = 69.1 bits (169), Expect = 1e-14
 Identities = 43/187 (22%), Positives = 75/187 (40%), Gaps = 24/187 (12%)

Query: 2   FIQHRAKVIIA-----DVQDDLCRALCKEFDSDELISYVCCNVTIDSD-VKNVFDFT--K 53
             +  A+V++A     +   +   A  KE         V  +V+ D + V+ +      +
Sbjct: 25  LAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAA-AVAADVSDDEESVEALVAAAEEE 83

Query: 54  FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM--------------IMVVFLGVLLFTA 99
           FG++DI+ NNAGI    D    +   E   RV+              + ++    ++  +
Sbjct: 84  FGRIDILVNNAGIA-GPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNIS 142

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
           ++A          Y  SK A++GL K L +EL    IRVN++A     TP        + 
Sbjct: 143 SVAGLGGPPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTPMTAALESAEL 202

Query: 160 KTFKELL 166
           +  K L 
Sbjct: 203 EALKRLA 209

Length = 251

>gnl|CDD|183778 PRK12829, PRK12829, short chain dehydrogenase; Provisional

 Score = 66.6 bits (163), Expect = 1e-13
 Identities = 44/162 (27%), Positives = 74/162 (45%), Gaps = 24/162 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
            F +  A+V + DV +    A        ++ + V  +V   + V+ VFD    +FG LD
Sbjct: 30  AFAEAGARVHVCDVSEAALAATAARLPGAKVTATVA-DVADPAQVERVFDTAVERFGGLD 88

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVM-----IMVVFL-------------GVLLFTAN 100
           ++ NNAGI +       +   E+ ++ +         F              GV++  ++
Sbjct: 89  VLVNNAGI-AGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSS 147

Query: 101 LATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
           +A    G      Y  SK+AV+GL+K+L +ELG   IRVN+I
Sbjct: 148 VAGRL-GYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAI 188

Length = 264

>gnl|CDD|180371 PRK06057, PRK06057, short chain dehydrogenase; Provisional

 Score = 64.8 bits (158), Expect = 4e-13
 Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 34/160 (21%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNA 64
           A V++ D+  +  +A   E        +V  +VT +  V  +FD     +G +DI FNNA
Sbjct: 32  ATVVVGDIDPEAGKAAADEVGG----LFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNA 87

Query: 65  GIISNMDRTTLDTDNE---KVKRVMIMVVFL--------------GVLLFTANL------ 101
           GI    D + L+T  +   +V+ V +  V+L              G ++ TA+       
Sbjct: 88  GISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGS 147

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
           AT  I      Y  SK  VL + + L V+  +  IRVN++
Sbjct: 148 ATSQIS-----YTASKGGVLAMSRELGVQFARQGIRVNAL 182

Length = 255

>gnl|CDD|180440 PRK06172, PRK06172, short chain dehydrogenase; Provisional

 Score = 62.5 bits (152), Expect = 4e-12
 Identities = 56/188 (29%), Positives = 87/188 (46%), Gaps = 24/188 (12%)

Query: 2   FIQHRAKVIIADVQDDLCR---ALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGK 56
           F +  AKV++AD          AL +E   + L  +V C+VT D++VK + + T   +G+
Sbjct: 27  FAREGAKVVVADRDAAGGEETVALIREAGGEAL--FVACDVTRDAEVKALVEQTIAAYGR 84

Query: 57  LDIMFNNAGIISNMDRTTLDTDNE--KVKRVMIMVVFL--------------GVLLFTAN 100
           LD  FNNAGI     R    ++ E   +  V +  V+L              G ++ TA+
Sbjct: 85  LDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTAS 144

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           +A       +  Y  SK+AV+GL K+  +E  +  IRVN++   V  T  F  A   D +
Sbjct: 145 VAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPR 204

Query: 161 TFKELLYA 168
              E   A
Sbjct: 205 -KAEFAAA 211

Length = 253

>gnl|CDD|187622 cd05364, SDR_c11, classical (c) SDR, subgroup 11

 Score = 62.4 bits (152), Expect = 4e-12
 Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 27/168 (16%)

Query: 20  RALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDT 77
           ++  +   S++ I  V  ++T +     +   T  KFG+LDI+ NNAGI++       D 
Sbjct: 45  QSCLQAGVSEKKILLVVADLTEEEGQDRIISTTLAKFGRLDILVNNAGILA-KGGGE-DQ 102

Query: 78  DNEKVKRVMIMVVFLGVLLFTANLA----TETIGE---------------ALYDYLMSKY 118
           D E+  +VM  +    V+  T  LA     +T GE                LY Y +SK 
Sbjct: 103 DIEEYDKVM-NLNLRAVIYLT-KLAVPHLIKTKGEIVNVSSVAGGRSFPGVLY-YCISKA 159

Query: 119 AVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELL 166
           A+    +   +EL    +RVNS++  V  T F    MG+ ++ + + L
Sbjct: 160 ALDQFTRCTALELAPKGVRVNSVSPGVIVTGFH-RRMGMPEEQYIKFL 206

SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 253

>gnl|CDD|183775 PRK12826, PRK12826, 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

 Score = 61.9 bits (151), Expect = 5e-12
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 27/159 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNN 63
           A+VI+ D+  D   A  +  ++          +V   + +K         FG+LDI+  N
Sbjct: 31  AEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVAN 90

Query: 64  AGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLA---T 103
           AGI   +     + D+E+ +RV+   +   FL              G ++ T+++A    
Sbjct: 91  AGI-FPLTPFA-EMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRV 148

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              G A   Y  SK  ++G  + L +EL   +I VNS+ 
Sbjct: 149 GYPGLA--HYAASKAGLVGFTRALALELAARNITVNSVH 185

Length = 251

>gnl|CDD|187591 cd05330, cyclohexanol_reductase_SDR_c, cyclohexanol reductases, including levodione reductase, classical (c) SDRs

 Score = 61.4 bits (149), Expect = 9e-12
 Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 23/171 (13%)

Query: 7   AKVIIADVQDD---LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
           AK+ + D+ ++     +A   E   D  +  +  +V+ ++ V+   D T  +FG++D  F
Sbjct: 28  AKLSLVDLNEEGLEAAKAALLEIAPDAEVLLIKADVSDEAQVEAYVDATVEQFGRIDGFF 87

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLG---VLL------FTANLATETIGEA 109
           NNAGI       T D   ++  +V+   +  VF G   VL           + T ++G  
Sbjct: 88  NNAGI-EGKQNLTEDFGADEFDKVVSINLRGVFYGLEKVLKVMREQGSGMIVNTASVGGI 146

Query: 110 -----LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
                   Y  +K+ V+GL +N  VE GQY IR+N+IA     TP    ++
Sbjct: 147 RGVGNQSGYAAAKHGVVGLTRNSAVEYGQYGIRINAIAPGAILTPMVEGSL 197

Cyloclohexanol reductases,including (6R)-2,2,6-trimethyl-1,4-cyclohexanedione (levodione) reductase of Corynebacterium aquaticum, catalyze the reversible oxidoreduction of hydroxycyclohexanone derivatives. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|234422 TIGR03971, SDR_subfam_1, oxidoreductase, SDR family

 Score = 60.2 bits (146), Expect = 2e-11
 Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 16/112 (14%)

Query: 54  FGKLDIMFNNAGIIS-----NMD----RTTLDTDNEKVKR-------VMIMVVFLGVLLF 97
           FG+LD++  NAG++S      +      T LD +   V R        MI     G ++ 
Sbjct: 91  FGRLDVVVANAGVLSYGRSWELSEEQWDTVLDINLTGVWRTCKAVVPHMIERGNGGSIII 150

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           T+++A       L  Y  +K+ ++GL K L  EL +Y IRVNSI      TP
Sbjct: 151 TSSVAGLKALPGLAHYAAAKHGLVGLTKTLANELAEYGIRVNSIHPYSVDTP 202

Members of this protein subfamily are putative oxidoreductases belonging to the larger SDR family. Members of the present subfamily may occur several to a genome and are largely restricted to genomes that contain members of families TIGR03962, TIGR03967, and TIGR03969. Many members have been annotated by homology as carveol dehydrogenases. Length = 265

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 59.9 bits (145), Expect = 6e-11
 Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 24/155 (15%)

Query: 9   VIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGI 66
           V++AD   +  R        D   +    +V+ ++ ++  F+    +FG++D++ NNAG+
Sbjct: 32  VVVADRNVERARERADSLGPDHH-ALAM-DVSDEAQIREGFEQLHREFGRIDVLVNNAGV 89

Query: 67  ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLF---TANLATETI-GEALYD---------- 112
                  TLDT  E+  R+   +   G  L       L  E   G A+ +          
Sbjct: 90  TDPTMTATLDTTLEEFARLQ-AINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVAL 148

Query: 113 -----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                Y  SK AV+ L ++L  E     IRVN++ 
Sbjct: 149 PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVL 183

Length = 520

>gnl|CDD|187605 cd05347, Ga5DH-like_SDR_c, gluconate 5-dehydrogenase (Ga5DH)-like, classical (c) SDRs

 Score = 58.5 bits (142), Expect = 7e-11
 Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 23/126 (18%)

Query: 37  CNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV 94
           C+V+ +  +K   +     FGK+DI+ NNAGII    R   +   E   R +I V   GV
Sbjct: 61  CDVSDEEAIKAAVEAIEEDFGKIDILVNNAGIIR---RHPAEEFPEAEWRDVIDVNLNGV 117

Query: 95  LLFT------------------ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI 136
              +                   +L +E  G  +  Y  SK  V GL K L  E  ++ I
Sbjct: 118 FFVSQAVARHMIKQGHGKIINICSLLSELGGPPVPAYAASKGGVAGLTKALATEWARHGI 177

Query: 137 RVNSIA 142
           +VN+IA
Sbjct: 178 QVNAIA 183

Ga5DH catalyzes the NADP-dependent conversion of carbon source D-gluconate and 5-keto-D-gluconate. This SDR subgroup has a classical Gly-rich NAD(P)-binding motif and a conserved active site tetrad pattern. However, it has been proposed that Arg104 (Streptococcus suis Ga5DH numbering), as well as an active site Ca2+, play a critical role in catalysis. In addition to Ga5DHs this subgroup contains Erwinia chrysanthemi KduD which is involved in pectin degradation, and is a putative 2,5-diketo-3-deoxygluconate dehydrogenase. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107,15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|187616 cd05358, GlcDH_SDR_c, glucose 1 dehydrogenase (GlcDH), classical (c) SDRs

 Score = 58.5 bits (142), Expect = 8e-11
 Identities = 41/165 (24%), Positives = 69/165 (41%), Gaps = 35/165 (21%)

Query: 6   RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
            A+ ++ +++    +A+  + D           V+ + DV  +F     +FG LDI+ NN
Sbjct: 40  AAEEVVEEIKAVGGKAIAVQAD-----------VSKEEDVVALFQSAIKEFGTLDILVNN 88

Query: 64  AGIISNMDRTTLDTDNE---KVKRVMIMVVFL---------------GVLLFTANLATET 105
           AG+    D ++ +   E   KV  V +   FL               G ++  +++  E 
Sbjct: 89  AGL--QGDASSHEMTLEDWNKVIDVNLTGQFLCAREAIKRFRKSKIKGKIINMSSVH-EK 145

Query: 106 IGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           I    + +Y  SK  V  + K L  E     IRVN+IA     TP
Sbjct: 146 IPWPGHVNYAASKGGVKMMTKTLAQEYAPKGIRVNAIAPGAINTP 190

GlcDH, is a tetrameric member of the SDR family, it catalyzes the NAD(P)-dependent oxidation of beta-D-glucose to D-glucono-delta-lactone. GlcDH has a typical NAD-binding site glycine-rich pattern as well as the canonical active site tetrad (YXXXK motif plus upstream Ser and Asn). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 253

>gnl|CDD|235546 PRK05653, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 58.6 bits (143), Expect = 8e-11
 Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 26/164 (15%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
                 AKV+I D  ++   AL  E  +       +  +V+ ++ V+ + +     FG L
Sbjct: 24  RLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLFTA-----------NLA- 102
           DI+ NNAGI    D        E   RV+   +   F  V                N++ 
Sbjct: 84  DILVNNAGI--TRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISS 141

Query: 103 ----TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               T   G+   +Y  +K  V+G  K L +EL    I VN++A
Sbjct: 142 VSGVTGNPGQT--NYSAAKAGVIGFTKALALELASRGITVNAVA 183

Length = 246

>gnl|CDD|187623 cd05365, 7_alpha_HSDH_SDR_c, 7 alpha-hydroxysteroid dehydrogenase (7 alpha-HSDH), classical (c) SDRs

 Score = 56.4 bits (136), Expect = 4e-10
 Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 21/156 (13%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVC-CNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A V+IAD++ +   A+          +    CNVT + D++ V   T  +FG + I+ NN
Sbjct: 24  ASVVIADLKSEGAEAVAAAIQQAGGQAIGLECNVTSEQDLEAVVKATVSQFGGITILVNN 83

Query: 64  AGIISNMDRTTLDTDNEKVKRVMIMVVFL-----------------GVLLFTANLATETI 106
           AG         +    E  +    + +F                  G +L  +++++E  
Sbjct: 84  AG-GGGPKPFDMPMTEEDFEWAFKLNLFSAFRLSQLCAPHMQKAGGGAILNISSMSSENK 142

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              +  Y  SK AV  + +NL  +LG   IRVN++A
Sbjct: 143 NVRIAAYGSSKAAVNHMTRNLAFDLGPKGIRVNAVA 178

This bacterial subgroup contains 7 alpha-HSDHs, including Escherichia coli 7 alpha-HSDH. 7 alpha-HSDH, a member of the SDR family, catalyzes the NAD+ -dependent dehydrogenation of a hydroxyl group at position 7 of the steroid skeleton of bile acids. In humans the two primary bile acids are cholic and chenodeoxycholic acids, these are formed from cholesterol in the liver. Escherichia coli 7 alpha-HSDH dehydroxylates these bile acids in the human intestine. Mammalian 7 alpha-HSDH activity has been found in livers. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 242

>gnl|CDD|235739 PRK06200, PRK06200, 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 24/162 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   A+V + +   +   +L + F    L+  V  +VT  +D +   D T   FGKLD 
Sbjct: 26  FLAEGARVAVLERSAEKLASLRQRFGDHVLV--VEGDVTSYADNQRAVDQTVDAFGKLDC 83

Query: 60  MFNNAGI------ISNMDRTTLDTDNEKVKRVMIMVVFLGV-------------LLFTAN 100
              NAGI      + ++   TLDT  +++  V +    LG              ++FT +
Sbjct: 84  FVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLS 143

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            ++   G     Y  SK+AV+GL++ L  EL    IRVN +A
Sbjct: 144 NSSFYPGGGGPLYTASKHAVVGLVRQLAYELAP-KIRVNGVA 184

Length = 263

>gnl|CDD|183833 PRK12939, PRK12939, short chain dehydrogenase; Provisional

 Score = 55.4 bits (134), Expect = 1e-09
 Identities = 42/158 (26%), Positives = 62/158 (39%), Gaps = 26/158 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A V   D      R L    ++       +  ++   + V+  FD      G LD + NN
Sbjct: 32  ATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNN 91

Query: 64  AGIISNMDRTTL-DTDNEKVKRVMIMVVFLGVLLFTA---------------NLATETIG 107
           AGI    +  +  + D +    VM  V   G  L                  NLA++T  
Sbjct: 92  AGI---TNSKSATELDIDTWDAVM-NVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTAL 147

Query: 108 ---EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                L  Y+ SK AV+G+ ++L  ELG   I VN+IA
Sbjct: 148 WGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAIA 185

Length = 250

>gnl|CDD|187598 cd05339, 17beta-HSDXI-like_SDR_c, human 17-beta-hydroxysteroid dehydrogenase XI-like, classical (c) SDRs

 Score = 54.9 bits (133), Expect = 1e-09
 Identities = 45/190 (23%), Positives = 74/190 (38%), Gaps = 34/190 (17%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKE-FDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLD 58
           F +  AKV+I D+ +            +   + Y  C+V+   +V       K   G + 
Sbjct: 19  FAKRGAKVVILDINEKGAEETANNVRKAGGKVHYYKCDVSKREEVYEAAKKIKKEVGDVT 78

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATE----------TIGE 108
           I+ NNAG++S   +  L+  +E++++    V  L     T     +          TI  
Sbjct: 79  ILINNAGVVSG--KKLLELPDEEIEKTF-EVNTLAHFWTTKAFLPDMLERNHGHIVTIAS 135

Query: 109 A--------LYDYLMSKYAVLGLMKNLCVELGQYD---IRVNSIAHIVSATPFFCN-AMG 156
                    L DY  SK A +G  ++L +EL  Y    I+   +       P+F N  M 
Sbjct: 136 VAGLISPAGLADYCASKAAAVGFHESLRLELKAYGKPGIKTTLV------CPYFINTGMF 189

Query: 157 IDKKTFKELL 166
              KT + LL
Sbjct: 190 QGVKTPRPLL 199

17-beta-hydroxysteroid dehydrogenases (17betaHSD) are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. 17betaHSD type XI, a classical SDR, preferentially converts 3alpha-adiol to androsterone but not numerous other tested steroids. This subgroup of classical SDRs also includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 243

>gnl|CDD|187638 cd08933, RDH_SDR_c, retinal dehydrogenase-like, classical (c) SDR

 Score = 55.2 bits (133), Expect = 2e-09
 Identities = 42/163 (25%), Positives = 79/163 (48%), Gaps = 23/163 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELIS--YVCCNVTIDSDVKNVFDFT--KFGK 56
            F+++ AKV+     +   +AL  E +     S  +V C+VT + D+K +   T  +FG+
Sbjct: 28  AFVENGAKVVFCARGEAAGQALESELNRAGPGSCKFVPCDVTKEEDIKTLISVTVERFGR 87

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA--------------NLA 102
           +D + NNAG      +TT +T  ++  R ++ +  +   L +               NL+
Sbjct: 88  IDCLVNNAG-WHPPHQTTDETSAQEF-RDLLNLNLISYFLASKYALPHLRKSQGNIINLS 145

Query: 103 T--ETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +   +IG+     Y+ +K A+  + K L V+  +Y +RVN I+
Sbjct: 146 SLVGSIGQKQAAPYVATKGAITAMTKALAVDESRYGVRVNCIS 188

These classical SDRs includes members identified as retinol dehydrogenases, which convert retinol to retinal, a property that overlaps with 17betaHSD activity. 17beta-dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens, and include members of the short-chain dehydrogenases/reductase family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 261

>gnl|CDD|187584 cd05323, ADH_SDR_c_like, insect type alcohol dehydrogenase (ADH)-like, classical (c) SDRs

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 27/191 (14%)

Query: 2   FIQHRAKVIIADVQDDL-CRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
            ++  AKV I D  ++    A  +  +     ++V C+VT    +   F     KFG++D
Sbjct: 20  LLKKGAKVAILDRNENPGAAAELQAINPKVKATFVQCDVTSWEQLAAAFKKAIEKFGRVD 79

Query: 59  IMFNNAGI---ISNMDRTTLDTDNEKVKRV----MIMVVFL-------------GVLLFT 98
           I+ NNAGI    S +    L    EK   V    +I   +L             GV++  
Sbjct: 80  ILINNAGILDEKSYLFAGKLPPPWEKTIDVNLTGVINTTYLALHYMDKNKGGKGGVIVNI 139

Query: 99  ANLATETIGEALYDYLMSKYAVLGLMKNLCVEL-GQYDIRVNSIAHIVSATPFFCNAMGI 157
            ++A          Y  SK+ V+G  ++L   L  +  +RVN+I    + TP       +
Sbjct: 140 GSVAGLYPAPQFPVYSASKHGVVGFTRSLADLLEYKTGVRVNAICPGFTNTPLL---PDL 196

Query: 158 DKKTFKELLYA 168
             K  + L  A
Sbjct: 197 VAKEAEMLPSA 207

This subgroup contains insect type ADH, and 15-hydroxyprostaglandin dehydrogenase (15-PGDH) type I; these proteins are classical SDRs. ADH catalyzes the NAD+-dependent oxidation of alcohols to aldehydes/ketones. This subgroup is distinct from the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase/reductase family, and evolved in fruit flies to allow the digestion of fermenting fruit. 15-PGDH catalyzes the NAD-dependent interconversion of (5Z,13E)-(15S)-11alpha,15-dihydroxy-9-oxoprost-13-enoate and (5Z,13E)-11alpha-hydroxy-9,15-dioxoprost-13-enoate, and has a typical SDR glycine-rich NAD-binding motif, which is not fully present in ADH. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 244

>gnl|CDD|187627 cd05369, TER_DECR_SDR_a, Trans-2-enoyl-CoA reductase (TER) and 2,4-dienoyl-CoA reductase (DECR), atypical (a) SDR

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 42/179 (23%), Positives = 59/179 (32%), Gaps = 56/179 (31%)

Query: 2   FIQHRAKVIIA----DVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFG 55
           F +  A V IA    +V +     +            + C+V     V+   D    +FG
Sbjct: 23  FAELGASVAIAGRKPEVLEAAAEEISSATGGRAHP--IQCDVRDPEAVEAAVDETLKEFG 80

Query: 56  KLDIMFNNAG---------IISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETI 106
           K+DI+ NNA          +  N  +T +D D                L  T N      
Sbjct: 81  KIDILINNAAGNFLAPAESLSPNGFKTVIDID----------------LNGTFNTTKAVG 124

Query: 107 GE--------------ALYDYL---------MSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                           A Y Y           +K  V  L ++L VE G Y IRVN+IA
Sbjct: 125 KRLIEAKHGGSILNISATYAYTGSPFQVHSAAAKAGVDALTRSLAVEWGPYGIRVNAIA 183

TTER is a peroxisomal protein with a proposed role in fatty acid elongation. Fatty acid synthesis is known to occur in the both endoplasmic reticulum and mitochondria; peroxisomal TER has been proposed as an additional fatty acid elongation system, it reduces the double bond at C-2 as the last step of elongation. This system resembles the mitochondrial system in that acetyl-CoA is used as a carbon donor. TER may also function in phytol metabolism, reducting phytenoyl-CoA to phytanoyl-CoA in peroxisomes. DECR processes double bonds in fatty acids to increase their utility in fatty acid metabolism; it reduces 2,4-dienoyl-CoA to an enoyl-CoA. DECR is active in mitochondria and peroxisomes. This subgroup has the Gly-rich NAD-binding motif of the classical SDR family, but does not display strong identity to the canonical active site tetrad, and lacks the characteristic Tyr at the usual position. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 249

>gnl|CDD|187647 cd08943, R1PA_ADH_SDR_c, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase, classical (c) SDRs

 Score = 53.9 bits (130), Expect = 3e-09
 Identities = 40/159 (25%), Positives = 69/159 (43%), Gaps = 20/159 (12%)

Query: 2   FIQHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
                A V++AD+  +   +           +   C +VT ++ V++ F+    +FG LD
Sbjct: 21  LAAEGAAVVVADIDPEIAEKVAEAAQGGPRALGVQC-DVTSEAQVQSAFEQAVLEFGGLD 79

Query: 59  IMFNNAGII--SNMDRTTLD----------TDNEKVKR----VMIMVVFLGVLLFTANLA 102
           I+ +NAGI   S +  T+L+          T +  V R    +M      G ++F A+  
Sbjct: 80  IVVSNAGIATSSPIAETSLEDWNRSMDINLTGHFLVSREAFRIMKSQGIGGNIVFNASKN 139

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
               G     Y  +K A   L + L +E G+  IRVN++
Sbjct: 140 AVAPGPNAAAYSAAKAAEAHLARCLALEGGEDGIRVNTV 178

This family has bifunctional proteins with an N-terminal aldolase and a C-terminal classical SDR domain. One member is identified as a rhamnulose-1-phosphate aldolase/alcohol dehydrogenase. The SDR domain has a canonical SDR glycine-rich NAD(P) binding motif and a match to the characteristic active site triad. However, it lacks an upstream active site Asn typical of SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|235924 PRK07063, PRK07063, short chain dehydrogenase; Provisional

 Score = 52.7 bits (127), Expect = 1e-08
 Identities = 41/165 (24%), Positives = 65/165 (39%), Gaps = 28/165 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT--KFGK 56
           F +  A V +AD+   L          D     +  V  +VT  + V          FG 
Sbjct: 27  FAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP 86

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL-------------------GVLLF 97
           LD++ NNAGI  N+    L   +E  +R     V L                   G ++ 
Sbjct: 87  LDVLVNNAGI--NVFADPLAMTDEDWRRC--FAVDLDGAWNGCRAVLPGMVERGRGSIVN 142

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            A+     I    + Y ++K+ +LGL + L +E    ++RVN+IA
Sbjct: 143 IASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIA 187

Length = 260

>gnl|CDD|236241 PRK08324, PRK08324, short chain dehydrogenase; Validated

 Score = 52.9 bits (128), Expect = 1e-08
 Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 26/158 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           A V++AD+ ++   A   E    +    V C+VT ++ V+  F+     FG +DI+ +NA
Sbjct: 447 ACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNA 506

Query: 65  GIISNMDRTTLDTDNEKVKRVM-IMV--VFL---------------GVLLFTA--NLATE 104
           GI  +      +T +E  +R   +     FL               G ++F A  N    
Sbjct: 507 GIAISGP--IEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNP 564

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                 Y    +K A L L++ L +ELG   IRVN + 
Sbjct: 565 GPNFGAYG--AAKAAELHLVRQLALELGPDGIRVNGVN 600

Length = 681

>gnl|CDD|135765 PRK06113, PRK06113, 7-alpha-hydroxysteroid dehydrogenase; Validated

 Score = 52.2 bits (125), Expect = 2e-08
 Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 23/161 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVC-CNVTIDSDVKNVFDFT--KFGKLD 58
           F    A V+++D+  D    +  E       ++ C C++T + ++  + DF   K GK+D
Sbjct: 31  FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVD 90

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL-----------------GVLLFTANL 101
           I+ NNAG          D      +R   + VF                  GV+L   ++
Sbjct: 91  ILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSM 147

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           A E     +  Y  SK A   L++N+  +LG+ +IRVN IA
Sbjct: 148 AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIA 188

Length = 255

>gnl|CDD|180576 PRK06463, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 24/127 (18%)

Query: 37  CNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV 94
           C+V     VK   +    +FG++D++ NNAGI+  M     + D EK  + MI +   G 
Sbjct: 58  CDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFE--EFDEEKYNK-MIKINLNGA 114

Query: 95  LLFT---------------ANLATET-IGEALYD---YLMSKYAVLGLMKNLCVELGQYD 135
           +  T                N+A+   IG A      Y ++K  ++ L + L  ELG+Y 
Sbjct: 115 IYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYG 174

Query: 136 IRVNSIA 142
           IRVN++A
Sbjct: 175 IRVNAVA 181

Length = 255

>gnl|CDD|236094 PRK07774, PRK07774, short chain dehydrogenase; Provisional

 Score = 51.7 bits (124), Expect = 3e-08
 Identities = 44/156 (28%), Positives = 68/156 (43%), Gaps = 22/156 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTI-DSD-VKNVFDFT--KFGKLDIMFN 62
           A V++AD+  +    + K+    +  + +   V + D D  K + D T   FG +D + N
Sbjct: 31  ASVVVADINAEGAERVAKQI-VADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVN 89

Query: 63  NAGIISNMDRTTLDT-DNEKVKRVMIMVVFLGVLLFT-------------ANLATETIGE 108
           NA I   M    L T   +  K+ M  V   G L+ T             A +   +   
Sbjct: 90  NAAIYGGMKLDLLITVPWDYYKKFM-SVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA 148

Query: 109 ALYD--YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            LY   Y ++K  + GL + L  ELG  +IRVN+IA
Sbjct: 149 WLYSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIA 184

Length = 250

>gnl|CDD|237219 PRK12827, PRK12827, short chain dehydrogenase; Provisional

 Score = 51.3 bits (123), Expect = 3e-08
 Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 39/166 (23%)

Query: 6   RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG 65
           +A  +  DV+D    A  +                +D+ V+      +FG+LDI+ NNAG
Sbjct: 60  KALGLAFDVRD---FAATRA--------------ALDAGVE------EFGRLDILVNNAG 96

Query: 66  IISNMD-------------RTTLDTDNEKVKRV---MIMVVFLGVLLFTANLATETIGEA 109
           I ++                  LD      +     MI     G ++  A++A       
Sbjct: 97  IATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRG 156

Query: 110 LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
             +Y  SK  ++GL K L  EL    I VN++A     TP   NA 
Sbjct: 157 QVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAA 202

Length = 249

>gnl|CDD|235925 PRK07067, PRK07067, sorbitol dehydrogenase; Provisional

 Score = 51.2 bits (123), Expect = 4e-08
 Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 28/170 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           ++   A+V+IAD++    R    E     +   V  +VT    +  +      +FG +DI
Sbjct: 26  YLAEGARVVIADIKPARARLAALEIGPAAI--AVSLDVTRQDSIDRIVAAAVERFGGIDI 83

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA-----------------NLA 102
           +FNNA +  +M    LD   +   R+    V +  L F                   N+A
Sbjct: 84  LFNNAALF-DM-APILDISRDSYDRLF--AVNVKGLFFLMQAVARHMVEQGRGGKIINMA 139

Query: 103 TET--IGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           ++    GEAL   Y  +K AV+   ++  + L ++ I VN+IA  V  TP
Sbjct: 140 SQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTP 189

Length = 257

>gnl|CDD|237100 PRK12429, PRK12429, 3-hydroxybutyrate dehydrogenase; Provisional

 Score = 51.0 bits (123), Expect = 4e-08
 Identities = 38/161 (23%), Positives = 73/161 (45%), Gaps = 22/161 (13%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKL 57
              +  AKV+IAD+ D+   A  +           V  +VT +  +    D+    FG +
Sbjct: 23  ALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82

Query: 58  DIMFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANL 101
           DI+ NNAGI  ++ ++    +   +K+  +M+   FL              G ++  A++
Sbjct: 83  DILVNNAGIQHVAPIEDFPTE-KWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASV 141

Query: 102 ATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
               +G A    Y+ +K+ ++GL K + +E   + + VN+I
Sbjct: 142 HG-LVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAI 181

Length = 258

>gnl|CDD|187610 cd05352, MDH-like_SDR_c, mannitol dehydrogenase (MDH)-like, classical (c) SDRs

 Score = 50.4 bits (121), Expect = 5e-08
 Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 23/126 (18%)

Query: 37  CNVTIDSDVKNVF-DFTK-FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF--- 91
           C+V+    V+  F    K FGK+DI+  NAGI   + +  LD   E+  +V+ + +    
Sbjct: 65  CDVSSQESVEKTFKQIQKDFGKIDILIANAGI--TVHKPALDYTYEQWNKVIDVNLNGVF 122

Query: 92  --------------LGVLLFTANLATETIGEALYD--YLMSKYAVLGLMKNLCVELGQYD 135
                          G L+ TA+++   +        Y  SK AV+ L K+L VE  +Y 
Sbjct: 123 NCAQAAAKIFKKQGKGSLIITASMSGTIVNRPQPQAAYNASKAAVIHLAKSLAVEWAKYF 182

Query: 136 IRVNSI 141
           IRVNSI
Sbjct: 183 IRVNSI 188

NADP-mannitol dehydrogenase catalyzes the conversion of fructose to mannitol, an acyclic 6-carbon sugar. MDH is a tetrameric member of the SDR family. This subgroup also includes various other tetrameric SDRs, including Pichia stipitis D-arabinitol dehydrogenase (aka polyol dehydrogenase), Candida albicans Sou1p, a sorbose reductase, and Candida parapsilosis (S)-specific carbonyl reductase (SCR, aka S-specific alcohol dehydrogenase) which catalyzes the enantioselective reduction of 2-hydroxyacetophenone into (S)-1-phenyl-1,2-ethanediol. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Length = 252

>gnl|CDD|180439 PRK06171, PRK06171, sorbitol-6-phosphate 2-dehydrogenase; Provisional

 Score = 50.4 bits (121), Expect = 6e-08
 Identities = 40/179 (22%), Positives = 74/179 (41%), Gaps = 43/179 (24%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            + + A V+ AD+          +   +    +V  +V+   +V +       KFG++D 
Sbjct: 29  LLANGANVVNADIHGG-------DGQHENYQ-FVPTDVSSAEEVNHTVAEIIEKFGRIDG 80

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRV--------MIMVVFLGVLLFT------------- 98
           + NNAGI  N+ R  +D  +   K          M  +   GV L +             
Sbjct: 81  LVNNAGI--NIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDG 138

Query: 99  --ANLATE-----TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA-HIVSATP 149
              N+++E     + G++ Y    +K A+    ++   ELG+++IRV  +A  I+ AT 
Sbjct: 139 VIVNMSSEAGLEGSEGQSCYA--ATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATG 195

Length = 266

>gnl|CDD|188170 TIGR01832, kduD, 2-deoxy-D-gluconate 3-dehydrogenase

 Score = 50.1 bits (120), Expect = 9e-08
 Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 53  KFGKLDIMFNNAGIISNMDRTTL-DTDNEKVKRVMIMVVFL---------------GVLL 96
           +FG +DI+ NNAGII   D     + D + V  V +  VF                G ++
Sbjct: 77  EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKII 136

Query: 97  FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             A++ +   G  +  Y  SK+AV GL K L  E     I VN+IA
Sbjct: 137 NIASMLSFQGGIRVPSYTASKHAVAGLTKLLANEWAAKGINVNAIA 182

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 248

>gnl|CDD|235500 PRK05557, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

 Score = 49.8 bits (120), Expect = 9e-08
 Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 33/130 (25%)

Query: 38  NVTIDSDVKNVFDFTK--FGKLDIMFNNAGII--SNMDRTTLDTDNEKVKRVMIMVVFL- 92
           +V+    V+   D  K  FG +DI+ NNAGI   + + R   + D ++V    +  VF  
Sbjct: 63  DVSDAESVERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEE-DWDRVIDTNLTGVFNL 121

Query: 93  --------------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG 132
                                V+    N      G+A  +Y  SK  V+G  K+L  EL 
Sbjct: 122 TKAVARPMMKQRSGRIINISSVVGLMGN-----PGQA--NYAASKAGVIGFTKSLARELA 174

Query: 133 QYDIRVNSIA 142
              I VN++A
Sbjct: 175 SRGITVNAVA 184

Length = 248

>gnl|CDD|181305 PRK08226, PRK08226, short chain dehydrogenase; Provisional

 Score = 49.8 bits (119), Expect = 1e-07
 Identities = 42/164 (25%), Positives = 70/164 (42%), Gaps = 28/164 (17%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGK 56
           VF +H A +I+ D+  ++ + L  E         + V  +V   + V         K G+
Sbjct: 25  VFARHGANLILLDISPEIEK-LADELCGRGHRCTAVVA-DVRDPASVAAAIKRAKEKEGR 82

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETI---------- 106
           +DI+ NNAG+        +  ++   +   I +   GV   T  +  E I          
Sbjct: 83  IDILVNNAGVCRLGSFLDMSDED---RDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMM 139

Query: 107 ----GEALYD-----YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
               G+ + D     Y ++K A++GL K+L VE  Q  IRVN+I
Sbjct: 140 SSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAI 183

Length = 263

>gnl|CDD|236210 PRK08267, PRK08267, short chain dehydrogenase; Provisional

 Score = 49.9 bits (120), Expect = 1e-07
 Identities = 40/162 (24%), Positives = 65/162 (40%), Gaps = 25/162 (15%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVF-DFTKF--GKL 57
           +F     +V   D+ +    AL  E  +    +    +VT  +       DF     G+L
Sbjct: 20  LFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGAL-DVTDRAAWDAALADFAAATGGRL 78

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVL-----------------LFTAN 100
           D++FNNAGI+        D   E   R +I +   GVL                 +   +
Sbjct: 79  DVLFNNAGILRGGPFE--DIPLEAHDR-VIDINVKGVLNGAHAALPYLKATPGARVINTS 135

Query: 101 LATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
            A+   G+  L  Y  +K+AV GL + L +E  ++ IRV  +
Sbjct: 136 SASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVADV 177

Length = 260

>gnl|CDD|187629 cd05371, HSD10-like_SDR_c, 17hydroxysteroid dehydrogenase type 10 (HSD10)-like, classical (c) SDRs

 Score = 50.0 bits (120), Expect = 1e-07
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 38/180 (21%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   AKV+I D+ +     + K  D+     +V  +VT + DVK        KFG+LDI
Sbjct: 22  LLAQGAKVVILDLPNSPGETVAKLGDNCR---FVPVDVTSEKDVKAALALAKAKFGRLDI 78

Query: 60  MFNNAGIIS--------NMDRTTLDTDNEKVKRVMIMVVF-------------------- 91
           + N AGI               +L+   ++V  V ++  F                    
Sbjct: 79  VVNCAGIAVAAKTYNKKGQQPHSLE-LFQRVINVNLIGTFNVIRLAAGAMGKNEPDQGGE 137

Query: 92  LGVLLFTANLAT--ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
            GV++ TA++A     IG+A Y    SK  ++G+   +  +L    IRV +IA  +  TP
Sbjct: 138 RGVIINTASVAAFEGQIGQAAYS--ASKGGIVGMTLPIARDLAPQGIRVVTIAPGLFDTP 195

HSD10, also known as amyloid-peptide-binding alcohol dehydrogenase (ABAD), was previously identified as a L-3-hydroxyacyl-CoA dehydrogenase, HADH2. In fatty acid metabolism, HADH2 catalyzes the third step of beta-oxidation, the conversion of a hydroxyl to a keto group in the NAD-dependent oxidation of L-3-hydroxyacyl CoA. In addition to alcohol dehydrogenase and HADH2 activites, HSD10 has steroid dehydrogenase activity. Although the mechanism is unclear, HSD10 is implicated in the formation of amyloid beta-petide in the brain (which is linked to the development of Alzheimer's disease). Although HSD10 is normally concentrated in the mitochondria, in the presence of amyloid beta-peptide it translocates into the plasma membrane, where it's action may generate cytotoxic aldehydes and may lower estrogen levels through its use of 17-beta-estradiol as a substrate. HSD10 is a member of the SRD family, but differs from other SDRs by the presence of two insertions of unknown function. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 252

>gnl|CDD|187624 cd05366, meso-BDH-like_SDR_c, meso-2,3-butanediol dehydrogenase-like, classical (c) SDRs

 Score = 49.7 bits (119), Expect = 1e-07
 Identities = 46/175 (26%), Positives = 72/175 (41%), Gaps = 31/175 (17%)

Query: 3   IQHR-----AKVIIADV-QDDLCRALCKEFDSDELISY-VCCNVTIDSDVKNVFDF--TK 53
           I  R       +++AD+  ++  ++  +E       +  V  +VT   DV+ + D    K
Sbjct: 18  IAERLAADGFNIVLADLNLEEAAKSTIQEISEAGYNAVAVGADVTDKDDVEALIDQAVEK 77

Query: 54  FGKLDIMFNNAGIISNMDRTTLDT----DNEKVKRVMIMVVFLGV--------------- 94
           FG  D+M NNAGI      T L T    D +KV  V +  V  G+               
Sbjct: 78  FGSFDVMVNNAGIAPI---TPLLTITEEDLKKVYAVNVFGVLFGIQAAARQFKKLGHGGK 134

Query: 95  LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           ++  +++A       L  Y  SK+AV GL +    EL    I VN+ A  +  T 
Sbjct: 135 IINASSIAGVQGFPNLGAYSASKFAVRGLTQTAAQELAPKGITVNAYAPGIVKTE 189

2,3-butanediol dehydrogenases (BDHs) catalyze the NAD+ dependent conversion of 2,3-butanediol to acetonin; BDHs are classified into types according to their stereospecificity as to substrates and products. Included in this subgroup are Klebsiella pneumonia meso-BDH which catalyzes meso-2,3-butanediol to D(-)-acetonin, and Corynebacterium glutamicum L-BDH which catalyzes lX+)-2,3-butanediol to L(+)-acetonin. This subgroup is comprised of classical SDRs with the characteristic catalytic triad and NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|131468 TIGR02415, 23BDH, acetoin reductases

 Score = 49.4 bits (118), Expect = 2e-07
 Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 34/182 (18%)

Query: 8   KVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNN 63
            V +AD+ ++  +   KE +    + ++Y   +V+    V +  D    KFG  D+M NN
Sbjct: 26  AVAVADLNEETAKETAKEINQAGGKAVAYKL-DVSDKDQVFSAIDQAAEKFGGFDVMVNN 84

Query: 64  AGIISNMDRTT--LDTDNEKVKRVMIMVVFLGVL-------------------LFTANLA 102
           AG+       T  L+   E++K+V  + V  GVL                   +  A++A
Sbjct: 85  AGV----APITPILEITEEELKKVYNVNVK-GVLFGIQAAARQFKKQGHGGKIINAASIA 139

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTF 162
                  L  Y  +K+AV GL +    EL    I VN+    +  TP +     ID++T 
Sbjct: 140 GHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMW---EEIDEETS 196

Query: 163 KE 164
           + 
Sbjct: 197 EI 198

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PMID:11577733) [Energy metabolism, Fermentation]. Length = 254

>gnl|CDD|135631 PRK05867, PRK05867, short chain dehydrogenase; Provisional

 Score = 48.9 bits (116), Expect = 2e-07
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 24/128 (18%)

Query: 37  CNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVF 91
           C+V+    V ++ D    + G +DI   NAGII+      LD   E+ +R+    +  VF
Sbjct: 65  CDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITV--TPMLDMPLEEFQRLQNTNVTGVF 122

Query: 92  L---------------GVLLFTANLATETIG--EALYDYLMSKYAVLGLMKNLCVELGQY 134
           L               GV++ TA+++   I   + +  Y  SK AV+ L K + VEL  +
Sbjct: 123 LTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPH 182

Query: 135 DIRVNSIA 142
            IRVNS++
Sbjct: 183 KIRVNSVS 190

Length = 253

>gnl|CDD|235712 PRK06138, PRK06138, short chain dehydrogenase; Provisional

 Score = 49.0 bits (117), Expect = 2e-07
 Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 25/171 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A+V++AD   +    +     +         +V     V+ + DF   ++G+LD+
Sbjct: 25  FAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDV 84

Query: 60  MFNNAGIISNMDRTTLDTDNE---KVKRVMIMVVFLG---------------VLLFTANL 101
           + NNAG       T + TD      V RV +  VFL                ++   + L
Sbjct: 85  LVNNAGFGCG--GTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQL 142

Query: 102 ATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
           A    G      Y+ SK A+  L + + ++     IRVN++A     TP+F
Sbjct: 143 AL--AGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF 191

Length = 252

>gnl|CDD|180761 PRK06935, PRK06935, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 48.6 bits (116), Expect = 3e-07
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 23/131 (17%)

Query: 32  ISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTL----DTDNEKVKRV 85
           +++V  ++T     + V      +FGK+DI+ NNAG I    R  L    D D   V  +
Sbjct: 65  VTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIR---RAPLLEYKDEDWNAVMDI 121

Query: 86  MIMVVFL--------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL 131
            +  V+               G ++  A++ +   G+ +  Y  SK+ V GL K    EL
Sbjct: 122 NLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANEL 181

Query: 132 GQYDIRVNSIA 142
             Y+I+VN+IA
Sbjct: 182 AAYNIQVNAIA 192

Length = 258

>gnl|CDD|181159 PRK07890, PRK07890, short chain dehydrogenase; Provisional

 Score = 48.0 bits (115), Expect = 4e-07
 Identities = 39/129 (30%), Positives = 58/129 (44%), Gaps = 23/129 (17%)

Query: 34  YVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF 91
            V  ++T +    N+      +FG++D + NNA  + +M     D D     R +I +  
Sbjct: 58  AVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSMKPLA-DADFAHW-RAVIELNV 115

Query: 92  LGVL----LFTANLATETIG-------------EALYD-YLMSKYAVLGLMKNLCVELGQ 133
           LG L     FT  LA E+ G             +  Y  Y M+K A+L   ++L  ELG 
Sbjct: 116 LGTLRLTQAFTPALA-ESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGP 174

Query: 134 YDIRVNSIA 142
             IRVNS+A
Sbjct: 175 QGIRVNSVA 183

Length = 258

>gnl|CDD|171531 PRK12481, PRK12481, 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

 Score = 48.0 bits (114), Expect = 5e-07
 Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 18/127 (14%)

Query: 34  YVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIIS----------------NMDRTTL 75
           ++  ++    D+ ++        G +DI+ NNAGII                 N+++ T+
Sbjct: 59  FITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTV 118

Query: 76  DTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD 135
              ++ V +  +     G ++  A++ +   G  +  Y  SK AV+GL + L  EL QY+
Sbjct: 119 FFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYN 178

Query: 136 IRVNSIA 142
           I VN+IA
Sbjct: 179 INVNAIA 185

Length = 251

>gnl|CDD|171821 PRK12937, PRK12937, short chain dehydrogenase; Provisional

 Score = 47.8 bits (114), Expect = 6e-07
 Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 19/127 (14%)

Query: 44  DVKNVFDF--TKFGKLDIMFNNAGIIS--NMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA 99
            V  +FD   T FG++D++ NNAG++    +    L+ D ++     +   F+ VL   A
Sbjct: 69  AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLE-DFDRTIATNLRGAFV-VLREAA 126

Query: 100 ----------NLATETIGEALYD---YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
                     NL+T  I   L     Y  SK AV GL+  L  EL    I VN++A    
Sbjct: 127 RHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPV 186

Query: 147 ATPFFCN 153
           AT  F N
Sbjct: 187 ATELFFN 193

Length = 245

>gnl|CDD|235545 PRK05650, PRK05650, short chain dehydrogenase; Provisional

 Score = 47.7 bits (114), Expect = 6e-07
 Identities = 36/152 (23%), Positives = 64/152 (42%), Gaps = 20/152 (13%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELIS-YVCCNVTIDSDVKNVFDF--TKFGKLDIMFNN 63
            ++ +ADV ++      K          Y  C+V   S +  +      K+G +D++ NN
Sbjct: 25  WRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNN 84

Query: 64  AGIISN--MDRTTLDTDNEKVKRVMIMVVFLGVLLFT--------------ANLATETIG 107
           AG+ S    +  +L+ D +    + +M V  G   F               A++A    G
Sbjct: 85  AGVASGGFFEELSLE-DWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQG 143

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVN 139
            A+  Y ++K  V+ L + L VEL   +I V+
Sbjct: 144 PAMSSYNVAKAGVVALSETLLVELADDEIGVH 175

Length = 270

>gnl|CDD|181721 PRK09242, PRK09242, tropinone reductase; Provisional

 Score = 47.0 bits (112), Expect = 9e-07
 Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 26/168 (15%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLD 58
           V I  R    +A  +D+L      E +   L +    +V+ D D + + D+ +  +  L 
Sbjct: 36  VLIVARDADALAQARDEL-AEEFPEREVHGLAA----DVSDDEDRRAILDWVEDHWDGLH 90

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVM---------IMVVFLGVLLFTANLATETIGE- 108
           I+ NNAG   N+ +  +D   ++ + +          +      +L   A+ A   IG  
Sbjct: 91  ILVNNAGG--NIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSV 148

Query: 109 -ALYD------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             L        Y M+K A+L + +NL VE  +  IRVN++A     TP
Sbjct: 149 SGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTP 196

Length = 257

>gnl|CDD|187620 cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs

 Score = 46.5 bits (111), Expect = 1e-06
 Identities = 35/134 (26%), Positives = 54/134 (40%), Gaps = 25/134 (18%)

Query: 38  NVTIDSDVKNVFDFTK--FGKLDIMFNNAGIISNMDRTTL-DTDNEKVKRVM---IMVVF 91
           +V+  S V  +FD  +  FG +DI+ NNAG+   M +  + +T  E+  R+        F
Sbjct: 61  DVSDPSQVARLFDAAEKAFGGVDILVNNAGV---MLKKPIAETSEEEFDRMFTVNTKGAF 117

Query: 92  LG--------------VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
                           + + ++  A  T       Y  SK AV    + L  ELG   I 
Sbjct: 118 FVLQEAAKRLRDGGRIINISSSLTAAYTPNYGA--YAGSKAAVEAFTRVLAKELGGRGIT 175

Query: 138 VNSIAHIVSATPFF 151
           VN++A     T  F
Sbjct: 176 VNAVAPGPVDTDMF 189

1,3,6,8-tetrahydroxynaphthalene reductase (4HNR) of Magnaporthe grisea and the related 1,3,8-trihydroxynaphthalene reductase (3HNR) are typical members of the SDR family containing the canonical glycine rich NAD(P)-binding site and active site tetrad, and function in fungal melanin biosynthesis. This subgroup also includes an SDR from Norway spruce that may function to protect against both biotic and abitoic stress. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 243

>gnl|CDD|233590 TIGR01830, 3oxo_ACP_reduc, 3-oxoacyl-(acyl-carrier-protein) reductase

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 31/166 (18%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +  AKVII     ++    + +E          V C+V+   DVK V +    + G +
Sbjct: 18  LAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPI 77

Query: 58  DIMFNNAGIISNMDRTTL-----DTDNEKVKRVMIMVVFL--------------GVLLFT 98
           DI+ NNAGI     R  L     + D + V    +  VF               G ++  
Sbjct: 78  DILVNNAGIT----RDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINI 133

Query: 99  ANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +++       G+A  +Y  SK  V+G  K+L  EL   +I VN++A
Sbjct: 134 SSVVGLMGNAGQA--NYAASKAGVIGFTKSLAKELASRNITVNAVA 177

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 239

>gnl|CDD|187634 cd08929, SDR_c4, classical (c) SDR, subgroup 4

 Score = 46.3 bits (110), Expect = 2e-06
 Identities = 26/124 (20%), Positives = 54/124 (43%), Gaps = 17/124 (13%)

Query: 35  VCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVV 90
           +  +V  ++DV+   D     FG LD + NNAG+  +  ++  T +     +   +    
Sbjct: 51  LAGDVRDEADVRRAVDAMEEAFGGLDALVNNAGVGVMKPVEELTPEEWRLVLDTNLTGAF 110

Query: 91  FL-------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
           +              G ++   +LA +   +    Y  SK+ +LGL +   ++L + +IR
Sbjct: 111 YCIHKAAPALLRRGGGTIVNVGSLAGKNAFKGGAAYNASKFGLLGLSEAAMLDLREANIR 170

Query: 138 VNSI 141
           V ++
Sbjct: 171 VVNV 174

This subgroup has a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 226

>gnl|CDD|181295 PRK08213, PRK08213, gluconate 5-dehydrogenase; Provisional

 Score = 46.1 bits (110), Expect = 2e-06
 Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 36/138 (26%)

Query: 34  YVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IM 88
           ++  +V  ++D++ + +    +FG +DI+ NNAG          D   E   +VM   + 
Sbjct: 65  WIAADVADEADIERLAEETLERFGHVDILVNNAGATWGAP--AEDHPVEAWDKVMNLNVR 122

Query: 89  VVFL---------------GVLLFTANLA---------TETIGEALYDYLMSKYAVLGLM 124
            +FL               G ++  A++A          +TI      Y  SK AV+   
Sbjct: 123 GLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIA-----YNTSKGAVINFT 177

Query: 125 KNLCVELGQYDIRVNSIA 142
           + L  E G + IRVN+IA
Sbjct: 178 RALAAEWGPHGIRVNAIA 195

Length = 259

>gnl|CDD|187606 cd05348, BphB-like_SDR_c, cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB)-like, classical (c) SDRs

 Score = 45.8 bits (109), Expect = 2e-06
 Identities = 43/162 (26%), Positives = 68/162 (41%), Gaps = 24/162 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   AKV + D   +    L  +F    +   V  +V   +D +        +FGKLD 
Sbjct: 24  FVAEGAKVAVLDRSAEKVAELRADFGDAVVG--VEGDVRSLADNERAVARCVERFGKLDC 81

Query: 60  MFNNAGI------ISNMDRTTLDTDNEKVKRVMIMVVFLGV-------------LLFTAN 100
              NAGI      + ++    LD   +++  + +    LG              ++FT +
Sbjct: 82  FIGNAGIWDYSTSLVDIPEEKLDEAFDELFHINVKGYILGAKAALPALYATEGSVIFTVS 141

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            A    G     Y  SK+AV+GL+K L  EL  + IRVN +A
Sbjct: 142 NAGFYPGGGGPLYTASKHAVVGLVKQLAYELAPH-IRVNGVA 182

cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase (BphB) is a classical SDR, it is of particular importance for its role in the degradation of biphenyl/polychlorinated biphenyls(PCBs); PCBs are a significant source of environmental contamination. This subgroup also includes Pseudomonas putida F1 cis-biphenyl-1,2-dihydrodiol-1,2-dehydrogenase (aka cis-benzene glycol dehydrogenase, encoded by the bnzE gene), which participates in benzene metabolism. In addition it includes Pseudomonas sp. C18 putative 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (aka dibenzothiophene dihydrodiol dehydrogenase, encoded by the doxE gene) which participates in an upper naphthalene catabolic pathway. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187648 cd08944, SDR_c12, classical (c) SDR, subgroup 12

 Score = 45.6 bits (108), Expect = 3e-06
 Identities = 42/176 (23%), Positives = 76/176 (43%), Gaps = 29/176 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           A+V++AD+     +A+  +     L   V  +VT +  V  +F+    +FG LD++ NNA
Sbjct: 28  ARVVVADIDGGAAQAVVAQIAGGALALRV--DVTDEQQVAALFERAVEEFGGLDLLVNNA 85

Query: 65  GIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATETIG 107
           G +  +    +DTD     + M   +   FL              G ++  +++A ++  
Sbjct: 86  GAMH-LTPAIIDTDLAVWDQTMAINLRGTFLCCRHAAPRMIARGGGSIVNLSSIAGQSGD 144

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA-------HIVSATPFFCNAMG 156
                Y  SK A+  L + L  EL    IR N++A        +++    F  A+G
Sbjct: 145 PGYGAYGASKAAIRNLTRTLAAELRHAGIRCNALAPGLIDTPLLLAKLAGFEGALG 200

These are classical SDRs, with the canonical active site tetrad and glycine-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 246

>gnl|CDD|187632 cd05374, 17beta-HSD-like_SDR_c, 17beta hydroxysteroid dehydrogenase-like, classical (c) SDRs

 Score = 45.3 bits (108), Expect = 4e-06
 Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 23/153 (15%)

Query: 37  CNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-------I 87
            +VT +  +K        +FG++D++ NNAG          +T  E+V+ +        +
Sbjct: 53  LDVTDEESIKAAVKEVIERFGRIDVLVNNAGYGLFG--PLEETSIEEVRELFEVNVFGPL 110

Query: 88  MVV--FL--------GVLLFTANLATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDI 136
            V   FL        G ++  +++A   +       Y  SK A+  L ++L +EL  + I
Sbjct: 111 RVTRAFLPLMRKQGSGRIVNVSSVAG-LVPTPFLGPYCASKAALEALSESLRLELAPFGI 169

Query: 137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLYAS 169
           +V  I      T F  NA G   +  +   YA 
Sbjct: 170 KVTIIEPGPVRTGFADNAAGSALEDPEISPYAP 202

17beta-hydroxysteroid dehydrogenases are a group of isozymes that catalyze activation and inactivation of estrogen and androgens. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 248

>gnl|CDD|180993 PRK07478, PRK07478, short chain dehydrogenase; Provisional

 Score = 44.9 bits (107), Expect = 5e-06
 Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 33/115 (28%)

Query: 52  TKFGKLDIMFNNAGIISNMD----------RTTLDTDNEKVKRVMIMVVFL--------- 92
            +FG LDI FNNAG +  M           R TL T+        +   FL         
Sbjct: 79  ERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATN--------LTSAFLGAKHQIPAM 130

Query: 93  -----GVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
                G L+FT+     T G   +  Y  SK  ++GL + L  E G   IRVN++
Sbjct: 131 LARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNAL 185

Length = 254

>gnl|CDD|181225 PRK08085, PRK08085, gluconate 5-dehydrogenase; Provisional

 Score = 44.7 bits (106), Expect = 6e-06
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 18/157 (11%)

Query: 4   QHRAKVIIADVQDDLCRALCKEFDSDELISY-VCCNVTIDSDVKNVFDFTK--FGKLDIM 60
           ++ A++II D+  +       +   + + ++    NVT   +V+   +  +   G +D++
Sbjct: 31  EYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVL 90

Query: 61  FNNAGIISNMDRTTL-DTDNEKVKRVMIMVVFL--------------GVLLFTANLATET 105
            NNAGI      T   + +   V  V    VFL              G ++   ++ +E 
Sbjct: 91  INNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSEL 150

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             + +  Y  SK AV  L + +CVEL +++I+VN IA
Sbjct: 151 GRDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIA 187

Length = 254

>gnl|CDD|180723 PRK06841, PRK06841, short chain dehydrogenase; Provisional

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 39/174 (22%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDI 59
           F    A+V + D  +D+     +          VC +V+    V+       + FG++DI
Sbjct: 35  FAAKGARVALLDRSEDVAEVAAQL-LGGNAKGLVC-DVSDSQSVEAAVAAVISAFGRIDI 92

Query: 60  MFNNAGI--------ISNMD-RTTLDTDNEK--------VKRVMIM-----VVFLGVLLF 97
           + N+AG+        +S  D   T+D  N K        V R MI      +V       
Sbjct: 93  LVNSAGVALLAPAEDVSEEDWDKTIDI-NLKGSFLMAQAVGRHMIAAGGGKIV------- 144

Query: 98  TANLATE--TIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT 148
             NLA++   +  E    Y  SK  V+G+ K L +E G Y I VN+I+  V  T
Sbjct: 145 --NLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLT 196

Length = 255

>gnl|CDD|226674 COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

 Score = 44.6 bits (106), Expect = 6e-06
 Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 26/162 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
             +  AKV++A  +++   AL  E  +   +  +  +VT  + V+   +    +FG++DI
Sbjct: 26  LAEAGAKVVLAARREERLEALADEIGAGAAL-ALALDVTDRAAVEAAIEALPEEFGRIDI 84

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLATE 104
           + NNAG+         D D+      MI     G+L  T                NL + 
Sbjct: 85  LVNNAGLALGDPLDEADLDD---WDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGS- 140

Query: 105 TIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             G   Y     Y  +K AV      L  EL    IRV  I+
Sbjct: 141 IAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVIS 182

Length = 246

>gnl|CDD|237187 PRK12743, PRK12743, oxidoreductase; Provisional

 Score = 44.6 bits (106), Expect = 7e-06
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 20/115 (17%)

Query: 53  KFGKLDIMFNNAGIIS-----NMD----RTTLDTD-------NEKVKRVMIMVVFLG--V 94
           + G++D++ NNAG ++     +MD    R     D       ++   R M+     G  +
Sbjct: 77  RLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRII 136

Query: 95  LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
            + + +  T   G + Y    +K+A+ GL K + +EL ++ I VN++A    ATP
Sbjct: 137 NITSVHEHTPLPGASAYT--AAKHALGGLTKAMALELVEHGILVNAVAPGAIATP 189

Length = 256

>gnl|CDD|237218 PRK12825, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.5 bits (106), Expect = 7e-06
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 25/130 (19%)

Query: 34  YVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRV------ 85
            V  +VT  + ++        +FG++DI+ NNAGI    D+   D  +++   V      
Sbjct: 60  AVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFE--DKPLADMSDDEWDEVIDVNLS 117

Query: 86  ----MIMVVFLG---------VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG 132
               ++  V            V + +        G +  +Y  +K  ++GL K L  EL 
Sbjct: 118 GVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRS--NYAAAKAGLVGLTKALARELA 175

Query: 133 QYDIRVNSIA 142
           +Y I VN +A
Sbjct: 176 EYGITVNMVA 185

Length = 249

>gnl|CDD|187626 cd05368, DHRS6_like_SDR_c, human DHRS6-like, classical (c) SDRs

 Score = 44.4 bits (105), Expect = 8e-06
 Identities = 40/157 (25%), Positives = 71/157 (45%), Gaps = 22/157 (14%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIM 60
            F +  A VI  D+ +       KE +    I+    +VT    V  +    + G++D++
Sbjct: 21  AFAREGANVIATDINE----EKLKELERGPGITTRVLDVTDKEQVAALA--KEEGRIDVL 74

Query: 61  FNNAGII---SNMDRTTLDTD---NEKVKRVMIMV-VFL--------GVLLFTANLATET 105
           FN AG +   S +D    D D   N  V+ + +M+   L        G ++  +++A+  
Sbjct: 75  FNCAGFVHHGSILDCEDDDWDFAMNLNVRSMYLMIKAVLPKMLARKDGSIINMSSVASSI 134

Query: 106 IGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
            G    + Y  +K AV+GL K++  +  Q  IR N+I
Sbjct: 135 KGVPNRFVYSTTKAAVIGLTKSVAADFAQQGIRCNAI 171

Human DHRS6, and similar proteins. These proteins are classical SDRs, with a canonical active site tetrad and a close match to the typical Gly-rich NAD-binding motif. Human DHRS6 is a cytosolic type 2 (R)-hydroxybutyrate dehydrogenase, which catalyses the conversion of (R)-hydroxybutyrate to acetoacetate. Also included in this subgroup is Escherichia coli UcpA (upstream cys P). Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Note: removed : needed to make this chiodl smaller when drew final trees: rmeoved text form description: Other proteins in this subgroup include Thermoplasma acidophilum aldohexose dehydrogenase, which has high dehydrogenase activity against D-mannose, Bacillus subtilis BacC involved in the biosynthesis of the dipeptide bacilysin and its antibiotic moiety anticapsin, Sphingomonas paucimobilis strain B90 LinC, involved in the degradation of hexachlorocyclohexane isomers...... P). Length = 241

>gnl|CDD|187641 cd08936, CR_SDR_c, Porcine peroxisomal carbonyl reductase like, classical (c) SDR

 Score = 44.5 bits (105), Expect = 8e-06
 Identities = 41/150 (27%), Positives = 62/150 (41%), Gaps = 32/150 (21%)

Query: 37  CNVTIDSDVKNVFDFT--KFGKLDIMFNNAGI----ISNMDRT------TLDTDNEKVKR 84
           C+V    D + +        G +DI+ +NA +     + +D T       LD  N K   
Sbjct: 66  CHVGKAEDRERLVATAVNLHGGVDILVSNAAVNPFFGNILDSTEEVWDKILDV-NVKATA 124

Query: 85  VMIMVVFL-------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
           +M   V         G ++  +++A       L  Y +SK A+LGL KNL  EL   +IR
Sbjct: 125 LMTKAVVPEMEKRGGGSVVIVSSVAAFHPFPGLGPYNVSKTALLGLTKNLAPELAPRNIR 184

Query: 138 VNSIAHIVSATPFFCNAMGIDKKTFKELLY 167
           VN            C A G+ K +F   L+
Sbjct: 185 VN------------CLAPGLIKTSFSSALW 202

This subgroup contains porcine peroxisomal carbonyl reductase and similar proteins. The porcine enzyme efficiently reduces retinals. This subgroup also includes human dehydrogenase/reductase (SDR family) member 4 (DHRS4), and human DHRS4L1. DHRS4 is a peroxisomal enzyme with 3beta-hydroxysteroid dehydrogenase activity; it catalyzes the reduction of 3-keto-C19/C21-steroids into 3beta-hydroxysteroids more efficiently than it does the retinal reduction. The human DHRS4 gene cluster contains DHRS4, DHRS4L2 and DHRS4L1. DHRS4L2 and DHRS4L1 are paralogs of DHRS4, DHRS4L2 being the most recent member. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 256

>gnl|CDD|187594 cd05333, BKR_SDR_c, beta-Keto acyl carrier protein reductase (BKR), involved in Type II FAS, classical (c) SDRs

 Score = 44.1 bits (105), Expect = 8e-06
 Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 32/161 (19%)

Query: 7   AKVIIADVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
           AKV + D  ++      +E         +    +V+    V+ + +    +FG +DI+ N
Sbjct: 25  AKVAVTDRSEEAAAETVEEIKALGGNAAALEA-DVSDREAVEALVEKVEAEFGPVDILVN 83

Query: 63  NAGIIS-----NMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA-----------NLA---- 102
           NAGI        M     + D + V  V +  VF                   N++    
Sbjct: 84  NAGITRDNLLMRMS----EEDWDAVINVNLTGVFNVTQAVIRAMIKRRSGRIINISSVVG 139

Query: 103 -TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                G+A  +Y  SK  V+G  K+L  EL    I VN++A
Sbjct: 140 LIGNPGQA--NYAASKAGVIGFTKSLAKELASRGITVNAVA 178

This subgroup includes the Escherichai coli K12 BKR, FabG. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet) NAD(P)(H) binding region and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H) binding pattern: TGxxxGxG in classical SDRs. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P) binding motif and an altered active site motif (YXXXN). Fungal type type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P) binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr-151 and Lys-155, and well as Asn-111 (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 240

>gnl|CDD|180817 PRK07060, PRK07060, short chain dehydrogenase; Provisional

 Score = 44.3 bits (105), Expect = 9e-06
 Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 55  GKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG------- 107
           G  D + N AGI      + LD   E   RVM  V   G  L   ++A   I        
Sbjct: 76  GAFDGLVNCAGI--ASLESALDMTAEGFDRVM-AVNARGAALVARHVARAMIAAGRGGSI 132

Query: 108 ------------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
                            Y  SK A+  + + LCVELG + IRVNS+   V+ TP
Sbjct: 133 VNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTP 186

Length = 245

>gnl|CDD|181297 PRK08217, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 39/174 (22%)

Query: 2   FIQHRAKVIIADV-QDDLCRAL--CKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGK 56
             Q  AK+ + D+ Q+ L  A+  C    + E+  Y   NVT + DV+  F      FG+
Sbjct: 25  LAQKGAKLALIDLNQEKLEEAVAECGALGT-EVRGYAA-NVTDEEDVEATFAQIAEDFGQ 82

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVM--------IMV----VFL------------ 92
           L+ + NNAGI+   D   +   + KV   M        I V    VFL            
Sbjct: 83  LNGLINNAGILR--DGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIES 140

Query: 93  ---GVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              GV++  +++A    +G+   +Y  SK  V  +      EL +Y IRV +IA
Sbjct: 141 GSKGVIINISSIARAGNMGQT--NYSASKAGVAAMTVTWAKELARYGIRVAAIA 192

Length = 253

>gnl|CDD|187590 cd05329, TR_SDR_c, tropinone reductase-I and II (TR-1, and TR-II)-like, classical (c) SDRs

 Score = 44.0 bits (104), Expect = 1e-05
 Identities = 35/160 (21%), Positives = 62/160 (38%), Gaps = 43/160 (26%)

Query: 37  CNVTIDSD-------VKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIM- 88
           C+V+  S+       V + F     GKL+I+ NNAG   N+ +   D   E    +M   
Sbjct: 62  CDVSSRSERQELMDTVASHFG----GKLNILVNNAGT--NIRKEAKDYTEEDYSLIMSTN 115

Query: 89  ----------------------VVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKN 126
                                 +VF+  +     + +         Y  +K A+  L ++
Sbjct: 116 FEAAYHLSRLAHPLLKASGNGNIVFISSVAGVIAVPSGAP------YGATKGALNQLTRS 169

Query: 127 LCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELL 166
           L  E  + +IRVN++A  V ATP     +   K+   +++
Sbjct: 170 LACEWAKDNIRVNAVAPWVIATPLVEPVIQ-QKENLDKVI 208

This subgroup includes TR-I and TR-II; these proteins are members of the SDR family. TRs catalyze the NADPH-dependent reductions of the 3-carbonyl group of tropinone, to a beta-hydroxyl group. TR-I and TR-II produce different stereoisomers from tropinone, TR-I produces tropine (3alpha-hydroxytropane), and TR-II, produces pseudotropine (sigma-tropine, 3beta-hydroxytropane). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 251

>gnl|CDD|187613 cd05355, SDR_c1, classical (c) SDR, subgroup 1

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 20/122 (16%)

Query: 45  VKNVFDFTKFGKLDIMFNNAG---IISNMDRTTLDTDN-EKVKRVMIMVVFL-------- 92
           VK V    +FGKLDI+ NNA       +++   + T+  EK  R  I  +F         
Sbjct: 96  VKEVVK--EFGKLDILVNNAAYQHPQESIE--DITTEQLEKTFRTNIFSMFYLTKAALPH 151

Query: 93  ----GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT 148
                 ++ T ++        L DY  +K A++   + L ++L +  IRVN++A     T
Sbjct: 152 LKKGSSIINTTSVTAYKGSPHLLDYAATKGAIVAFTRGLSLQLAEKGIRVNAVAPGPIWT 211

Query: 149 PF 150
           P 
Sbjct: 212 PL 213

These proteins are members of the classical SDR family, with a canonical active site tetrad and a typical Gly-rich NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 270

>gnl|CDD|181605 PRK08993, PRK08993, 2-deoxy-D-gluconate 3-dehydrogenase; Validated

 Score = 43.3 bits (102), Expect = 2e-05
 Identities = 28/107 (26%), Positives = 49/107 (45%), Gaps = 16/107 (14%)

Query: 52  TKFGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL---------------GVL 95
            +FG +DI+ NNAG+I   D       + + V  + I  VF                G +
Sbjct: 81  AEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKI 140

Query: 96  LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +  A++ +   G  +  Y  SK  V+G+ + +  E  +++I VN+IA
Sbjct: 141 INIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIA 187

Length = 253

>gnl|CDD|183489 PRK12384, PRK12384, sorbitol-6-phosphate dehydrogenase; Provisional

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 30/158 (18%), Positives = 64/158 (40%), Gaps = 27/158 (17%)

Query: 8   KVIIADVQDDLCRALCKE----FDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
           +V +AD+  +    + +E    +       +   + T +  V  +       FG++D++ 
Sbjct: 28  RVAVADINSEKAANVAQEINAEYGEGMAYGFGA-DATSEQSVLALSRGVDEIFGRVDLLV 86

Query: 62  NNAGIISNMDRTTLDTDNEK----------------VKRVMIMVVFLGVLLFTANLATET 105
            NAGI      T     +                    R+MI     G ++   N  +  
Sbjct: 87  YNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRII-QINSKSGK 145

Query: 106 IGEALYD--YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
           +G + ++  Y  +K+  +GL ++L ++L +Y I V+S+
Sbjct: 146 VG-SKHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSL 182

Length = 259

>gnl|CDD|187585 cd05324, carb_red_PTCR-like_SDR_c, Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs

 Score = 43.0 bits (102), Expect = 2e-05
 Identities = 33/120 (27%), Positives = 50/120 (41%), Gaps = 18/120 (15%)

Query: 39  VTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLL 96
           VT D+ ++   DF   K+G LDI+ NNAGI       +  T   +  R  +   F G + 
Sbjct: 59  VTDDASIEAAADFVEEKYGGLDILVNNAGIAFKGFDDS--TPTREQARETMKTNFFGTVD 116

Query: 97  FTANL--------------ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            T  L               +  +G     Y +SK A+  L + L  EL +  I+VN+  
Sbjct: 117 VTQALLPLLKKSPAGRIVNVSSGLGSLTSAYGVSKAALNALTRILAKELKETGIKVNACC 176

PTCR is a classical SDR which catalyzes the NADPH-dependent reduction of ketones on steroids and prostaglandins. Unlike most SDRs, PTCR functions as a monomer. This subgroup also includes human carbonyl reductase 1 (CBR1) and CBR3. CBR1 is an NADPH-dependent SDR with broad substrate specificity and may be responsible for the in vivo reduction of quinones, prostaglandins, and other carbonyl-containing compounds. In addition it includes poppy NADPH-dependent salutaridine reductase which catalyzes the stereospecific reduction of salutaridine to 7(S)-salutaridinol in the biosynthesis of morphine, and Arabidopsis SDR1,a menthone reductase, which catalyzes the reduction of menthone to neomenthol, a compound with antimicrobial activity; SDR1 can also carry out neomenthol oxidation. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 225

>gnl|CDD|187611 cd05353, hydroxyacyl-CoA-like_DH_SDR_c-like, (3R)-hydroxyacyl-CoA dehydrogenase-like, classical(c)-like SDRs

 Score = 43.1 bits (102), Expect = 2e-05
 Identities = 36/120 (30%), Positives = 55/120 (45%), Gaps = 25/120 (20%)

Query: 42  DSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE---KVKRVMIMVVFL------ 92
           +  VK   D   FG++DI+ NNAGI+   DR+      E    V RV +   F       
Sbjct: 76  EKIVKTAID--AFGRVDILVNNAGILR--DRSFAKMSEEDWDLVMRVHLKGSFKVTRAAW 131

Query: 93  --------GVLLFTANLA--TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                   G ++ T++ A      G+A  +Y  +K  +LGL   L +E  +Y+I  N+IA
Sbjct: 132 PYMRKQKFGRIINTSSAAGLYGNFGQA--NYSAAKLGLLGLSNTLAIEGAKYNITCNTIA 189

Beta oxidation of fatty acids in eukaryotes occurs by a four-reaction cycle, that may take place in mitochondria or in peroxisomes. (3R)-hydroxyacyl-CoA dehydrogenase is part of rat peroxisomal multifunctional MFE-2, it is a member of the NAD-dependent SDRs, but contains an additional small C-terminal domain that completes the active site pocket and participates in dimerization. The atypical, additional C-terminal extension allows for more extensive dimerization contact than other SDRs. MFE-2 catalyzes the second and third reactions of the peroxisomal beta oxidation cycle. Proteins in this subgroup have a typical catalytic triad, but have a His in place of the usual upstream Asn. This subgroup also contains members identified as 17-beta-hydroxysteroid dehydrogenases, including human peroxisomal 17-beta-hydroxysteroid dehydrogenase type 4 (17beta-HSD type 4, aka MFE-2, encoded by HSD17B4 gene) which is involved in fatty acid beta-oxidation and steroid metabolism. This subgroup also includes two SDR domains of the Neurospora crassa and Saccharomyces cerevisiae multifunctional beta-oxidation protein (MFP, aka Fox2). SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 250

>gnl|CDD|187636 cd08931, SDR_c9, classical (c) SDR, subgroup 9

 Score = 42.8 bits (101), Expect = 2e-05
 Identities = 26/102 (25%), Positives = 41/102 (40%), Gaps = 21/102 (20%)

Query: 55  GKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVL-----------------LF 97
           G+LD +FNNAG+         +         M+ +   GVL                 + 
Sbjct: 75  GRLDALFNNAGVGRG---GPFEDVPLAAHDRMVDINVKGVLNGAYAALPYLKATPGARVI 131

Query: 98  TANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRV 138
               ++   G+  L  Y  +K+AV GL + L VE  ++ IRV
Sbjct: 132 NTASSSAIYGQPDLAVYSATKFAVRGLTEALDVEWARHGIRV 173

This subgroup has the canonical active site tetrad and NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 227

>gnl|CDD|187621 cd05363, SDH_SDR_c, Sorbitol dehydrogenase (SDH), classical (c) SDR

 Score = 42.6 bits (100), Expect = 3e-05
 Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 28/170 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVT----IDSDVKNVFDFTKFGKL 57
           +++  A+V IAD+  +  RA   E         +  +VT    ID  V  + D  ++G +
Sbjct: 23  YVREGARVAIADINLEAARATAAEIGPAACA--ISLDVTDQASIDRCVAALVD--RWGSI 78

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLA 102
           DI+ NNA +        +D   E   R+  + V   + +  A               N+A
Sbjct: 79  DILVNNAALFDL--APIVDITRESYDRLFAINVSGTLFMMQAVARAMIAQGRGGKIINMA 136

Query: 103 TET--IGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           ++    GEAL   Y  +K AV+ L ++  + L ++ I VN+IA  V    
Sbjct: 137 SQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGE 186

This bacterial subgroup includes Rhodobacter sphaeroides SDH, and other SDHs. SDH preferentially interconverts D-sorbitol (D-glucitol) and D-fructose, but also interconverts L-iditol/L-sorbose and galactitol/D-tagatose. SDH is NAD-dependent and is a dimeric member of the SDR family. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 254

>gnl|CDD|183832 PRK12935, PRK12935, acetoacetyl-CoA reductase; Provisional

 Score = 42.3 bits (99), Expect = 4e-05
 Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 32/189 (16%)

Query: 21  ALCKEFDSDELISY-VCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAGIISNMDRTTLDT 77
            L  E   +    Y V  +V+   D   + +     FGK+DI+ NNAGI    DRT    
Sbjct: 46  NLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGI--TRDRTFKKL 103

Query: 78  DNEKVKRVMIMVVFLGVLLFTANLA---------------TETIGEA----LYDYLMSKY 118
           + E  +RV+   V L  +  T +                 +  IG+A      +Y  +K 
Sbjct: 104 NREDWERVID--VNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKA 161

Query: 119 AVLGLMKNLCVELGQYDIRVNSI------AHIVSATPFFCNAMGIDKKTFKELLYASANL 172
            +LG  K+L +EL + ++ VN+I        +V+  P       + K   K    A    
Sbjct: 162 GMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIA 221

Query: 173 KGVVLKAAD 181
           KGVV    D
Sbjct: 222 KGVVYLCRD 230

Length = 247

>gnl|CDD|181491 PRK08589, PRK08589, short chain dehydrogenase; Validated

 Score = 42.5 bits (100), Expect = 4e-05
 Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 47/198 (23%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDFT-----KF 54
              Q  A V+  D+ + +   + K   +  +  +Y   +V I SD + V DF      +F
Sbjct: 25  ALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAY---HVDI-SDEQQVKDFASEIKEQF 80

Query: 55  GKLDIMFNNAGI-----------------ISNMD-RTTLDTDNEKVKRVMI--MVVFLGV 94
           G++D++FNNAG+                 I  +D R T       + ++++  M+   G 
Sbjct: 81  GRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTF-----LMTKMLLPLMMEQGGS 135

Query: 95  LLFTANLATETIGEA--LY--DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
           ++ T++ +    G+A  LY   Y  +K AV+   K++ +E G+  IR N+IA     TP 
Sbjct: 136 IINTSSFS----GQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPL 191

Query: 151 FCNAMGIDK----KTFKE 164
                G  +    KTF+E
Sbjct: 192 VDKLTGTSEDEAGKTFRE 209

Length = 272

>gnl|CDD|235794 PRK06398, PRK06398, aldose dehydrogenase; Validated

 Score = 42.1 bits (99), Expect = 5e-05
 Identities = 36/158 (22%), Positives = 68/158 (43%), Gaps = 28/158 (17%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
              +  + VI  D+++           S   + Y   +V+    V    D   +K+G++D
Sbjct: 25  RLKEEGSNVINFDIKEP----------SYNDVDYFKVDVSNKEQVIKGIDYVISKYGRID 74

Query: 59  IMFNNAGIISNMDRTTLDTD------NEKVKRVMIMVVFL---------GVLLFTANLAT 103
           I+ NNAGI S      ++ D      N  V  + +M  +          GV++  A++ +
Sbjct: 75  ILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS 134

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
             +      Y+ SK+AVLGL +++ V+     IR  ++
Sbjct: 135 FAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAV 171

Length = 258

>gnl|CDD|235633 PRK05872, PRK05872, short chain dehydrogenase; Provisional

 Score = 41.9 bits (99), Expect = 5e-05
 Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 23/157 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           AK+ + D+++    AL  E   D+ +  V  +VT  + ++   +    +FG +D++  NA
Sbjct: 34  AKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANA 93

Query: 65  GIISNMDRTTLDTDNEKVKRVMIMVVFLGV-----------------LLFTANLATETIG 107
           GI S    +    D +  +RV I V  LGV                 +L  ++LA     
Sbjct: 94  GIASG--GSVAQVDPDAFRRV-IDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA 150

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI 144
             +  Y  SK  V      L +E+  + + V   A++
Sbjct: 151 PGMAAYCASKAGVEAFANALRLEVAHHGVTV-GSAYL 186

Length = 296

>gnl|CDD|181136 PRK07825, PRK07825, short chain dehydrogenase; Provisional

 Score = 41.5 bits (98), Expect = 8e-05
 Identities = 38/165 (23%), Positives = 63/165 (38%), Gaps = 36/165 (21%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-----TKFGK 56
                A+V I D+ + L +    E     L+     +VT   D  +   F        G 
Sbjct: 25  LAALGARVAIGDLDEALAKETAAELG---LVVGGPLDVT---DPASFAAFLDAVEADLGP 78

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT------------------ 98
           +D++ NNAG+   M       + + V R ++ V   GV+L +                  
Sbjct: 79  IDVLVNNAGV---MPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNV 135

Query: 99  ANLATE--TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
           A+LA +    G A Y    SK+AV+G      +EL    + V+ +
Sbjct: 136 ASLAGKIPVPGMATYC--ASKHAVVGFTDAARLELRGTGVHVSVV 178

Length = 273

>gnl|CDD|235990 PRK07326, PRK07326, short chain dehydrogenase; Provisional

 Score = 41.1 bits (97), Expect = 1e-04
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 30/173 (17%)

Query: 1   VFIQHRAKV-IIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKL 57
             +    KV I A  Q +L  A   E ++   +  +  +V  ++DV+   D     FG L
Sbjct: 25  ALLAEGYKVAITARDQKELEEAA-AELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83

Query: 58  DIMFNNAGI-----ISNMD----RTTLDTD-----------NEKVKRVMIMVVFLGVLLF 97
           D++  NAG+     +  +     R  +DT+              +KR    ++ +  L  
Sbjct: 84  DVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG 143

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
           T   A    G A Y+   SK+ ++G  +   ++L QY I+V++I     AT F
Sbjct: 144 TNFFA----GGAAYN--ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHF 190

Length = 237

>gnl|CDD|235702 PRK06124, PRK06124, gluconate 5-dehydrogenase; Provisional

 Score = 41.2 bits (97), Expect = 1e-04
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 29/110 (26%)

Query: 55  GKLDIMFNNAGIISNMDRTTL-DTDNEKVKRVMIMVVFLGVLLFTANLATETI------- 106
           G+LDI+ NN G     DR  L + D+  ++ ++   +   +LL  + LA + +       
Sbjct: 87  GRLDILVNNVG---ARDRRPLAELDDAAIRALLETDLVAPILL--SRLAAQRMKRQGYGR 141

Query: 107 --------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                         G+A+Y    +K  + GLM+ L  E G + I  N+IA
Sbjct: 142 IIAITSIAGQVARAGDAVYP--AAKQGLTGLMRALAAEFGPHGITSNAIA 189

Length = 256

>gnl|CDD|135637 PRK05876, PRK05876, short chain dehydrogenase; Provisional

 Score = 41.1 bits (96), Expect = 1e-04
 Identities = 49/178 (27%), Positives = 78/178 (43%), Gaps = 31/178 (17%)

Query: 2   FIQHRAKVIIADV-QDDLCRAL----CKEFDSDELISYVCCNVTIDSDVKNVFD--FTKF 54
           F +  A+V++ DV +  L +A+     + FD       V C+V    +V ++ D  F   
Sbjct: 26  FARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHG----VMCDVRHREEVTHLADEAFRLL 81

Query: 55  GKLDIMFNNAGI-----ISNMD----RTTLDTDNEKVKRVMIMVVFLGVLL--------- 96
           G +D++F+NAGI     I  M     R  +D D      +  +  FL  LL         
Sbjct: 82  GHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVD--LWGSIHTVEAFLPRLLEQGTGGHVV 139

Query: 97  FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA 154
           FTA+ A       L  Y ++KY V+GL + L  E+    I V+ +  +V  T    N+
Sbjct: 140 FTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANS 197

Length = 275

>gnl|CDD|223696 COG0623, FabI, Enoyl-[acyl-carrier-protein]

 Score = 41.0 bits (97), Expect = 1e-04
 Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 32/152 (21%)

Query: 20  RALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAGIISNMDRTTL-- 75
             L +E  SD ++    C+VT D  +  +F   K  +GKLD + ++   I+   +  L  
Sbjct: 49  EELAEELGSDLVL---PCDVTNDESIDALFATIKKKWGKLDGLVHS---IAFAPKEELKG 102

Query: 76  ---DTDNEKVKRVMIMVVFLGVLLFTANLATETIGEAL--YDYL-----MSKYAVLGLMK 125
              DT  E     M +  +    L  A       G ++    YL     +  Y V+G+ K
Sbjct: 103 DYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAK 162

Query: 126 N--------LCVELGQYDIRVNSIAHIVSATP 149
                    L  +LG+  IRVN+I    SA P
Sbjct: 163 AALEASVRYLAADLGKEGIRVNAI----SAGP 190

Length = 259

>gnl|CDD|180771 PRK06947, PRK06947, glucose-1-dehydrogenase; Provisional

 Score = 40.2 bits (94), Expect = 2e-04
 Identities = 35/127 (27%), Positives = 61/127 (48%), Gaps = 24/127 (18%)

Query: 38  NVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL 92
           +V  ++DV  +FD   + FG+LD + NNAGI++       D D  +++R+    ++  +L
Sbjct: 60  DVANEADVIAMFDAVQSAFGRLDALVNNAGIVAP-SMPLADMDAARLRRMFDTNVLGAYL 118

Query: 93  -----------------GVLLFTANLATETIGEALY-DYLMSKYAVLGLMKNLCVELGQY 134
                            G ++  +++A+       Y DY  SK AV  L   L  ELG +
Sbjct: 119 CAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPH 178

Query: 135 DIRVNSI 141
            +RVN++
Sbjct: 179 GVRVNAV 185

Length = 248

>gnl|CDD|180617 PRK06550, fabG, 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

 Score = 39.9 bits (94), Expect = 2e-04
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 18/109 (16%)

Query: 51  FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------G 93
           F     +DI+ N AGI+ +  +  LDT  E+ + +    +   FL              G
Sbjct: 62  FDWVPSVDILCNTAGILDDY-KPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSG 120

Query: 94  VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +++   ++A+   G     Y  SK+A+ G  K L ++  +  I+V  IA
Sbjct: 121 IIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIA 169

Length = 235

>gnl|CDD|181585 PRK08936, PRK08936, glucose-1-dehydrogenase; Provisional

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 37/123 (30%), Positives = 58/123 (47%), Gaps = 18/123 (14%)

Query: 38  NVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG- 93
           +VT++SDV N+      +FG LD+M NNAGI + +    +  ++  KV    +   FLG 
Sbjct: 65  DVTVESDVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGS 124

Query: 94  ---VLLFTA--------NLAT--ETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVN 139
              +  F          N+++  E I   L+  Y  SK  V  + + L +E     IRVN
Sbjct: 125 REAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVN 184

Query: 140 SIA 142
           +I 
Sbjct: 185 NIG 187

Length = 261

>gnl|CDD|237220 PRK12828, PRK12828, short chain dehydrogenase; Provisional

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 26/107 (24%), Positives = 36/107 (33%), Gaps = 21/107 (19%)

Query: 53  KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVL----------------- 95
           +FG+LD + N AG       T  D D +   R M  V     L                 
Sbjct: 79  QFGRLDALVNIAGAFVW--GTIADGDADTWDR-MYGVNVKTTLNASKAALPALTASGGGR 135

Query: 96  -LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
            +     A    G  +  Y  +K  V  L + L  EL    I VN++
Sbjct: 136 IVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAV 182

Length = 239

>gnl|CDD|187583 cd05322, SDH_SDR_c_like, Sorbitol 6-phosphate dehydrogenase (SDH), classical (c) SDRs

 Score = 39.8 bits (93), Expect = 3e-04
 Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 8   KVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
            V +AD+  +    +  E ++   E       + T +  V  +       F ++D++  +
Sbjct: 28  DVAVADINSENAEKVADEINAEYGEKAYGFGADATNEQSVIALSKGVDEIFKRVDLLVYS 87

Query: 64  AGI-----ISNMDRTTLDTDNE-----------KVKRVMIMVVFLGVLLFTANLATETIG 107
           AGI     I++ +    D   +           +  ++MI     G ++   N  +  +G
Sbjct: 88  AGIAKSAKITDFELGDFDRSLQVNLVGYFLCAREFSKLMIRDGIQGRII-QINSKSGKVG 146

Query: 108 EALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
                 Y  +K+  +GL ++L ++L ++ I VNS+
Sbjct: 147 SKHNSGYSAAKFGGVGLTQSLALDLAEHGITVNSL 181

Sorbitol 6-phosphate dehydrogenase (SDH, aka glucitol 6-phosphate dehydrogenase) catalyzes the NAD-dependent interconversion of D-fructose 6-phosphate to D-sorbitol 6-phosphate. SDH is a member of the classical SDRs, with the characteristic catalytic tetrad, but without a complete match to the typical NAD-binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 257

>gnl|CDD|187643 cd08939, KDSR-like_SDR_c, 3-ketodihydrosphingosine reductase (KDSR) and related proteins, classical (c) SDR

 Score = 39.9 bits (94), Expect = 3e-04
 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 40/176 (22%)

Query: 7   AKVIIA--DVQ--DDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFD--FTKFGKLDI 59
           A VII        ++    +  E ++    +SY+  +++   +V+  F     K G  D+
Sbjct: 26  ANVIIVARSESKLEEAVEEIEAEANASGQKVSYISADLSDYEEVEQAFAQAVEKGGPPDL 85

Query: 60  MFNNAGIISNMDRTTL--DTDNEKVKRVMIMVVF-----------------LGVLLFTAN 100
           + N AG    +    L  D   E+ +R M +  F                  G ++F ++
Sbjct: 86  VVNCAG----ISIPGLFEDLTAEEFERGMDVNYFGSLNVAHAVLPLMKEQRPGHIVFVSS 141

Query: 101 LATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS----ATPFF 151
            A   +G   Y  Y  SK+A+ GL ++L  EL  Y+IRV     +V      TP F
Sbjct: 142 QAA-LVGIYGYSAYCPSKFALRGLAESLRQELKPYNIRV----SVVYPPDTDTPGF 192

These proteins include members identified as KDSR, ribitol type dehydrogenase, and others. The group shows strong conservation of the active site tetrad and glycine rich NAD-binding motif of the classical SDRs. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 239

>gnl|CDD|187599 cd05340, Ycik_SDR_c, Escherichia coli K-12 YCIK-like, classical (c) SDRs

 Score = 39.5 bits (92), Expect = 4e-04
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 22/107 (20%)

Query: 54  FGKLDIMFNNAGIISNMDRTTL----DTDNEKVKRVMIMVVFL--------------GVL 95
           + +LD + +NAG++   D   L        + V +V +   F+              G L
Sbjct: 82  YPRLDGVLHNAGLLG--DVCPLSEQNPQVWQDVXQVNVNATFMLTQALLPLLLKSDAGSL 139

Query: 96  LFTANLATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
           +FT++      G A +  Y +SK+A  GL + L  E  Q ++RVN I
Sbjct: 140 VFTSSSVGRQ-GRANWGAYAVSKFATEGLXQVLADEYQQRNLRVNCI 185

Escherichia coli K-12 YCIK and related proteins have a canonical classical SDR nucleotide-binding motif and active site tetrad. They are predicted oxoacyl-(acyl carrier protein/ACP) reductases. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 236

>gnl|CDD|236110 PRK07831, PRK07831, short chain dehydrogenase; Provisional

 Score = 38.9 bits (91), Expect = 6e-04
 Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 49/192 (25%)

Query: 7   AKVIIADVQ----DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
           A+V+I+D+      +    L  E     + + VC +VT ++ V  + D    + G+LD++
Sbjct: 43  ARVVISDIHERRLGETADELAAELGLGRVEAVVC-DVTSEAQVDALIDAAVERLGRLDVL 101

Query: 61  FNNAGI-----ISNMDRTTLDTDNE--KVKRVMIMVVFL---------------GVLLFT 98
            NNAG+     + +M      TD+E  +V  V +   F                GV++  
Sbjct: 102 VNNAGLGGQTPVVDM------TDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNN 155

Query: 99  ANL----ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA 154
           A++    A    G+A   Y  +K  V+ L +   +E  +Y +R+N++A  ++  PF    
Sbjct: 156 ASVLGWRAQH--GQA--HYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPF---- 207

Query: 155 MGIDKKTFKELL 166
             + K T  ELL
Sbjct: 208 --LAKVTSAELL 217

Length = 262

>gnl|CDD|180408 PRK06114, PRK06114, short chain dehydrogenase; Provisional

 Score = 38.6 bits (90), Expect = 6e-04
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 19/131 (14%)

Query: 38  NVTIDSDVKNVFDFTK--FGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL-- 92
           +VT  +D++     T+   G L +  N AGI +      ++ +  + V  + +  VFL  
Sbjct: 66  DVTSKADLRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSC 125

Query: 93  ------------GVLLFTANLATETIGEALYD--YLMSKYAVLGLMKNLCVELGQYDIRV 138
                       G ++  A+++   +   L    Y  SK  V+ L K+L +E     IRV
Sbjct: 126 QAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIRV 185

Query: 139 NSIAHIVSATP 149
           NSI+   +ATP
Sbjct: 186 NSISPGYTATP 196

Length = 254

>gnl|CDD|180818 PRK07062, PRK07062, short chain dehydrogenase; Provisional

 Score = 38.5 bits (90), Expect = 8e-04
 Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 22/161 (13%)

Query: 2   FIQHRAKVII----ADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FG 55
            ++  A V I     +        L ++F    L++   C+V  ++DV       +  FG
Sbjct: 28  LLEAGASVAICGRDEERLASAEARLREKFPGARLLA-ARCDVLDEADVAAFAAAVEARFG 86

Query: 56  KLDIMFNNAG--IISNMDRTTLD--TDNEKVK--RVMIMV-VFLGVLLFTANLATETIGE 108
            +D++ NNAG   +S    TT D   D  ++K   V+     FL +L  +A  +   +  
Sbjct: 87  GVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNS 146

Query: 109 ALY---DYLM-----SKYAVLGLMKNLCVELGQYDIRVNSI 141
            L    +  M     ++  +L L+K+L  EL    +RVNSI
Sbjct: 147 LLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVNSI 187

Length = 265

>gnl|CDD|131680 TIGR02632, RhaD_aldol-ADH, rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

 Score = 38.7 bits (90), Expect = 0.001
 Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 27/160 (16%)

Query: 7   AKVIIADVQDDLCRA------LCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
           A V++AD+  +L  A      +  +F +   ++ +  +VT +  VK  F      +G +D
Sbjct: 439 AHVVLADL--NLEAAEAVAAEINGQFGAGRAVA-LKMDVTDEQAVKAAFADVALAYGGVD 495

Query: 59  IMFNNAGIISN--MDRTTLDTDN--------------EKVKRVMIMVVFLGVLLFTANLA 102
           I+ NNAGI ++   + TTL                   +  R M      G ++F A+  
Sbjct: 496 IVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKN 555

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               G+    Y  +K A   L + L  E G Y IRVN++ 
Sbjct: 556 AVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVN 595

Length = 676

>gnl|CDD|187597 cd05338, DHRS1_HSDL2-like_SDR_c, human dehydrogenase/reductase (SDR family) member 1 (DHRS1) and human hydroxysteroid dehydrogenase-like protein 2 (HSDL2), classical (c) SDRs

 Score = 38.1 bits (89), Expect = 0.001
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 21/127 (16%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEK---VKRVMIMV 89
           +  +V  +  V+ + + T  +FG+LDI+ NNAG I        DT  ++   ++RV +  
Sbjct: 69  IVVDVRDEDQVRALVEATVDQFGRLDILVNNAGAIWL--SLVEDTPAKRFDLMQRVNLRG 126

Query: 90  VFLGVLLF-----------TANLATE-TIGEALYD--YLMSKYAVLGLMKNLCVELGQYD 135
            +L                  N++   ++  A  D  Y   K  +  L   L  EL ++ 
Sbjct: 127 TYLLSQAALPHMVKAGQGHILNISPPLSLRPARGDVAYAAGKAGMSRLTLGLAAELRRHG 186

Query: 136 IRVNSIA 142
           I VNS+ 
Sbjct: 187 IAVNSLW 193

This subgroup includes human DHRS1 and human HSDL2 and related proteins. These are members of the classical SDR family, with a canonical Gly-rich NAD-binding motif and the typical YXXXK active site motif. However, the rest of the catalytic tetrad is not strongly conserved. DHRS1 mRNA has been detected in many tissues, liver, heart, skeletal muscle, kidney and pancreas; a longer transcript is predominantly expressed in the liver , a shorter one in the heart. HSDL2 may play a part in fatty acid metabolism, as it is found in peroxisomes. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

>gnl|CDD|187630 cd05372, ENR_SDR, Enoyl acyl carrier protein (ACP) reductase (ENR), divergent SDR

 Score = 37.9 bits (89), Expect = 0.001
 Identities = 40/168 (23%), Positives = 69/168 (41%), Gaps = 34/168 (20%)

Query: 7   AKVII---ADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMF 61
           A++      +        L +      L+  + C+V+ D ++K +F   K  +GKLD + 
Sbjct: 28  AELAFTYQPEALRKRVEKLAERLGESALV--LPCDVSNDEEIKELFAEVKKDWGKLDGLV 85

Query: 62  NNAGIISNMDRTTL-----DTDNEKVKRVMIMVVFLGVLLFTANLATETIGEAL--YDYL 114
           ++   I+   +  L     DT  +   + + +  +  V L  A L     G ++    YL
Sbjct: 86  HS---IAFAPKVQLKGPFLDTSRKGFLKALDISAYSLVSLAKAALPIMNPGGSIVTLSYL 142

Query: 115 -----MSKYAVLGLMK--------NLCVELGQYDIRVNSIAHIVSATP 149
                +  Y V+G+ K         L  ELG+  IRVN+I    SA P
Sbjct: 143 GSERVVPGYNVMGVAKAALESSVRYLAYELGRKGIRVNAI----SAGP 186

This bacterial subgroup of ENRs includes Escherichia coli ENR. ENR catalyzes the NAD(P)H-dependent reduction of enoyl-ACP in the last step of fatty acid biosynthesis. De novo fatty acid biosynthesis is catalyzed by the fatty acid synthetase complex, through the serial addition of 2-carbon subunits. In bacteria and plants,ENR catalyzes one of six synthetic steps in this process. Oilseed rape ENR, and also apparently the NADH-specific form of Escherichia coli ENR, is tetrameric. Although similar to the classical SDRs, this group does not have the canonical catalytic tetrad, nor does it have the typical Gly-rich NAD-binding pattern. Such so-called divergent SDRs have a GXXXXXSXA NAD-binding motif and a YXXMXXXK (or YXXXMXXXK) active site motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRs are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering). In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Extended SDRs have additional elements in the C-terminal region, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Some atypical SDRs have lost catalytic activity and/or have an unusual NAD(P)-binding motif and missing or unusual active site residues. Reactions catalyzed within the SDR family include isomerization, decarboxylation, epimerization, C=N bond reduction, dehydratase activity, dehalogenation, Enoyl-CoA reduction, and carbonyl-alcohol oxidoreduction. Length = 250

>gnl|CDD|180802 PRK07035, PRK07035, short chain dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 37/175 (21%)

Query: 4   QHRAKVIIADVQDDLCRALCKEFDSDELIS------YVCCNVTIDSDVKNVFDFTK--FG 55
           Q  A VI++  + D C+A+     +D +++       + C++     +  +F   +   G
Sbjct: 30  QQGAHVIVSSRKLDGCQAV-----ADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG 84

Query: 56  KLDIMFNNAGI---ISNMDRTTLDTDN---EKVKRVMI-----MVVFL---------GVL 95
           +LDI+ NNA       ++    LDTD    +K   V I     M V           G +
Sbjct: 85  RLDILVNNAAANPYFGHI----LDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSI 140

Query: 96  LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
           +  A++   + G+    Y ++K AV+ + K    E   + IRVN++   ++ T F
Sbjct: 141 VNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKF 195

Length = 252

>gnl|CDD|235933 PRK07097, PRK07097, gluconate 5-dehydrogenase; Provisional

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 40/162 (24%), Positives = 67/162 (41%), Gaps = 20/162 (12%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDV-KNVFDFTK-FGKLDIMFN 62
           A ++  D+  +L       +     E   YVC +VT +  V   V    K  G +DI+ N
Sbjct: 35  ATIVFNDINQELVDKGLAAYRELGIEAHGYVC-DVTDEDGVQAMVSQIEKEVGVIDILVN 93

Query: 63  NAGIISNMDRTTLDT-DNEKVKRVMIMVVFL--------------GVLLFTANLATETIG 107
           NAGII  +    +   D  +V  + +   F+              G ++   ++ +E   
Sbjct: 94  NAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGR 153

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           E +  Y  +K  +  L KN+  E G+ +I+ N I     ATP
Sbjct: 154 ETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATP 195

Length = 265

>gnl|CDD|168574 PRK06484, PRK06484, short chain dehydrogenase; Validated

 Score = 37.5 bits (87), Expect = 0.002
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 26/155 (16%)

Query: 8   KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAG 65
           +++I D   +  + L  E   DE +S V  ++T ++ V++ F     ++G+LD++ NNAG
Sbjct: 295 RLLIIDRDAEGAKKL-AEALGDEHLS-VQADITDEAAVESAFAQIQARWGRLDVLVNNAG 352

Query: 66  IISNMDRTTLDTDNEKVKRVM---------------IMVVFLGVLLFTANLATETIGEAL 110
           I     + +L+   E   RV                 ++   GV++   NL +     AL
Sbjct: 353 IAEVF-KPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIV---NLGSIASLLAL 408

Query: 111 ---YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                Y  SK AV  L ++L  E     IRVN++A
Sbjct: 409 PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVA 443

Length = 520

>gnl|CDD|211705 TIGR01963, PHB_DH, 3-hydroxybutyrate dehydrogenase

 Score = 37.3 bits (87), Expect = 0.002
 Identities = 37/155 (23%), Positives = 74/155 (47%), Gaps = 22/155 (14%)

Query: 7   AKVIIADVQDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNN 63
           A V++ D  ++   A  K   D+   + Y+  +VT + ++ ++       FG LDI+ NN
Sbjct: 26  ANVVVNDFGEEGAEAAAKVAGDAGGSVIYLPADVTKEDEIADMIAAAAAEFGGLDILVNN 85

Query: 64  AGI--ISNMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLATETIG 107
           AGI  ++ ++    + D +++  VM+   F               G ++  A+ A   + 
Sbjct: 86  AGIQHVAPIEEFPPE-DWDRIIAVMLTSAFHTIRAALPHMKKQGWGRIINIAS-AHGLVA 143

Query: 108 EALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
                 Y+ +K+ ++GL K L +E+ ++ I VN+I
Sbjct: 144 SPFKSAYVAAKHGLIGLTKVLALEVAEHGITVNAI 178

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. Length = 255

>gnl|CDD|131732 TIGR02685, pter_reduc_Leis, pteridine reductase

 Score = 37.2 bits (86), Expect = 0.002
 Identities = 34/157 (21%), Positives = 62/157 (39%), Gaps = 41/157 (26%)

Query: 36  CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII------------SNMDRTTLDTDNEKVK 83
            C   ID+       F  FG+ D++ NNA                  D+ +L+    ++ 
Sbjct: 70  RCEAIIDAC------FRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELF 123

Query: 84  RVMIMVVFLGVLLF------------TANLATETIGEALYD--------YLMSKYAVLGL 123
               +  +  +  F            + NL+   + +A+ D        Y M+K+A+ GL
Sbjct: 124 GSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAKHALEGL 183

Query: 124 MKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
            ++  +EL    IRVN +A  +S  P   +AM  + +
Sbjct: 184 TRSAALELAPLQIRVNGVAPGLSLLP---DAMPFEVQ 217

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. Length = 267

>gnl|CDD|235628 PRK05855, PRK05855, short chain dehydrogenase; Validated

 Score = 37.3 bits (87), Expect = 0.003
 Identities = 39/118 (33%), Positives = 48/118 (40%), Gaps = 28/118 (23%)

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVL----LF---------------T 98
           DI+ NNAGI   M    LDT  E   RV + V   GV+    LF                
Sbjct: 394 DIVVNNAGI--GMAGGFLDTSAEDWDRV-LDVNLWGVIHGCRLFGRQMVERGTGGHIVNV 450

Query: 99  ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI------AHIVSATPF 150
           A+ A      +L  Y  SK AVL L + L  EL    I V +I       +IV+ T F
Sbjct: 451 ASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRF 508

Length = 582

>gnl|CDD|236357 PRK08945, PRK08945, putative oxoacyl-(acyl carrier protein) reductase; Provisional

 Score = 36.8 bits (86), Expect = 0.003
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 22/108 (20%)

Query: 53  KFGKLDIMFNNAGIISNMDRTTLDT-DNEKVKRVM---IMVVFL--------------GV 94
           +FG+LD + +NAG++   +   ++  D E  + VM   +   F+                
Sbjct: 89  QFGRLDGVLHNAGLLG--ELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAAS 146

Query: 95  LLFTANLATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
           L+FT++ +    G A +  Y +SK+A  G+M+ L  E    ++RVN I
Sbjct: 147 LVFTSS-SVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCI 193

Length = 247

>gnl|CDD|180458 PRK06194, PRK06194, hypothetical protein; Provisional

 Score = 36.5 bits (85), Expect = 0.003
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 8/97 (8%)

Query: 8   KVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNN 63
           K+++ADVQ D       E  +   E++  V  +V+  + V+ + D    +FG + ++FNN
Sbjct: 32  KLVLADVQQDALDRAVAELRAQGAEVLG-VRTDVSDAAQVEALADAALERFGAVHLLFNN 90

Query: 64  AGIISN--MDRTTLDTDNEKVKRVMIMVVFLGVLLFT 98
           AG+ +   +   +L  D E V  V +  V  GV  FT
Sbjct: 91  AGVGAGGLVWENSL-ADWEWVLGVNLWGVIHGVRAFT 126

Length = 287

>gnl|CDD|180411 PRK06123, PRK06123, short chain dehydrogenase; Provisional

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 32/130 (24%), Positives = 56/130 (43%), Gaps = 24/130 (18%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           V  +V  ++DV  +F+    + G+LD + NNAGI+    R     D  ++ R+    ++ 
Sbjct: 57  VAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQMRLE-QMDAARLTRIFATNVVG 115

Query: 90  VFL-----------------GVLLFTANLATETIGEALY-DYLMSKYAVLGLMKNLCVEL 131
            FL                 G ++  +++A        Y DY  SK A+  +   L  E+
Sbjct: 116 SFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEV 175

Query: 132 GQYDIRVNSI 141
               IRVN++
Sbjct: 176 AAEGIRVNAV 185

Length = 248

>gnl|CDD|187607 cd05349, BKR_2_SDR_c, putative beta-ketoacyl acyl carrier protein [ACP]reductase (BKR), subgroup 2, classical (c) SDR

 Score = 36.3 bits (84), Expect = 0.004
 Identities = 14/32 (43%), Positives = 21/32 (65%)

Query: 111 YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +DY  +K A+LG  +N+  ELG Y I VN ++
Sbjct: 151 HDYTTAKAALLGFTRNMAKELGPYGITVNMVS 182

This subgroup includes Rhizobium sp. NGR234 FabG1. The Escherichai coli K12 BKR, FabG, belongs to a different subgroup. BKR catalyzes the NADPH-dependent reduction of ACP in the first reductive step of de novo fatty acid synthesis (FAS). FAS consists of four elongation steps, which are repeated to extend the fatty acid chain through the addition of two-carbo units from malonyl acyl-carrier protein (ACP): condensation, reduction, dehydration, and a final reduction. Type II FAS, typical of plants and many bacteria, maintains these activities on discrete polypeptides, while type I FAS utilizes one or two multifunctional polypeptides. BKR resembles enoyl reductase, which catalyzes the second reduction step in FAS. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold (alpha/beta folding pattern with a central beta-sheet), an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Classical SDRs are typically about 250 residues long, while extended SDRS are approximately 350 residues. Sequence identity between different SDR enzymes are typically in the 15-30% range, but the enzymes share the Rossmann fold NAD-binding motif and characteristic NAD-binding and catalytic sequence patterns. These enzymes have a 3-glycine N-terminal NAD(P)(H)-binding pattern (typically, TGxxxGxG in classical SDRs and TGxxGxxG in extended SDRs), while substrate binding is in the C-terminal region. A critical catalytic Tyr residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase (15-PGDH) numbering), is often found in a conserved YXXXK pattern. In addition to the Tyr and Lys, there is often an upstream Ser (Ser-138, 15-PGDH numbering) and/or an Asn (Asn-107, 15-PGDH numbering) or additional Ser, contributing to the active site. Substrates for these enzymes include sugars, steroids, alcohols, and aromatic compounds. The standard reaction mechanism is a proton relay involving the conserved Tyr and Lys, as well as Asn (or Ser). Some SDR family members, including 17 beta-hydroxysteroid dehydrogenase contain an additional helix-turn-helix motif that is not generally found among SDRs. Length = 246

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	181
KOG1200	256	consensus Mitochondrial/plastidial beta-ketoacyl-A	100.0
PF13561	241	adh_short_C2: Enoyl-(Acyl carrier protein) reducta	100.0
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	100.0
PRK08339	263	short chain dehydrogenase; Provisional	100.0
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	99.98
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	99.98
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.97
COG0300	265	DltE Short-chain dehydrogenases of various substra	99.97
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	99.97
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK07063	260	short chain dehydrogenase; Provisional	99.97
KOG0725	270	consensus Reductases with broad range of substrate	99.97
PRK08340	259	glucose-1-dehydrogenase; Provisional	99.97
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	99.97
PRK05867	253	short chain dehydrogenase; Provisional	99.97
PRK08589	272	short chain dehydrogenase; Validated	99.97
PRK07478	254	short chain dehydrogenase; Provisional	99.97
PRK08085	254	gluconate 5-dehydrogenase; Provisional	99.97
KOG1207	245	consensus Diacetyl reductase/L-xylulose reductase	99.97
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	99.96
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	99.96
PRK08265	261	short chain dehydrogenase; Provisional	99.96
PRK06114	254	short chain dehydrogenase; Provisional	99.96
PRK07062	265	short chain dehydrogenase; Provisional	99.96
PRK06484	520	short chain dehydrogenase; Validated	99.96
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	99.96
PRK05872	296	short chain dehydrogenase; Provisional	99.96
PRK06172	253	short chain dehydrogenase; Provisional	99.96
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	99.96
PRK08277	278	D-mannonate oxidoreductase; Provisional	99.96
PRK08993	253	2-deoxy-D-gluconate 3-dehydrogenase; Validated	99.96
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	99.96
PRK07831	262	short chain dehydrogenase; Provisional	99.96
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	99.96
PRK07035	252	short chain dehydrogenase; Provisional	99.96
PRK07677	252	short chain dehydrogenase; Provisional	99.96
PRK07523	255	gluconate 5-dehydrogenase; Provisional	99.96
PRK08643	256	acetoin reductase; Validated	99.96
PRK08303	305	short chain dehydrogenase; Provisional	99.96
PRK07097	265	gluconate 5-dehydrogenase; Provisional	99.96
PRK12747	252	short chain dehydrogenase; Provisional	99.96
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	99.96
PRK07985	294	oxidoreductase; Provisional	99.96
PRK09242	257	tropinone reductase; Provisional	99.96
TIGR01500	256	sepiapter_red sepiapterin reductase. This model de	99.96
PRK06125	259	short chain dehydrogenase; Provisional	99.96
PRK06128	300	oxidoreductase; Provisional	99.96
PRK06940	275	short chain dehydrogenase; Provisional	99.95
PRK07791	286	short chain dehydrogenase; Provisional	99.95
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	99.95
PRK08936	261	glucose-1-dehydrogenase; Provisional	99.95
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	99.95
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	99.95
PRK07067	257	sorbitol dehydrogenase; Provisional	99.95
PRK12859	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.95
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.95
PRK06398	258	aldose dehydrogenase; Validated	99.95
TIGR01831	239	fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas	99.95
PRK12743	256	oxidoreductase; Provisional	99.95
PRK06124	256	gluconate 5-dehydrogenase; Provisional	99.95
PRK06139	330	short chain dehydrogenase; Provisional	99.95
PRK07856	252	short chain dehydrogenase; Provisional	99.95
PRK05876	275	short chain dehydrogenase; Provisional	99.95
TIGR02415	254	23BDH acetoin reductases. One member of this famil	99.95
PRK06484	520	short chain dehydrogenase; Validated	99.95
PRK05599	246	hypothetical protein; Provisional	99.95
PRK08226	263	short chain dehydrogenase; Provisional	99.95
PRK06841	255	short chain dehydrogenase; Provisional	99.94
PRK08862	227	short chain dehydrogenase; Provisional	99.94
PRK07890	258	short chain dehydrogenase; Provisional	99.94
PRK06300	299	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK05855	582	short chain dehydrogenase; Validated	99.94
PRK06483	236	dihydromonapterin reductase; Provisional	99.94
PLN02253	280	xanthoxin dehydrogenase	99.94
PRK06500	249	short chain dehydrogenase; Provisional	99.94
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	99.94
PRK06949	258	short chain dehydrogenase; Provisional	99.94
PRK07814	263	short chain dehydrogenase; Provisional	99.94
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	99.94
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	99.94
PRK07069	251	short chain dehydrogenase; Validated	99.94
PRK05717	255	oxidoreductase; Validated	99.94
PRK12938	246	acetyacetyl-CoA reductase; Provisional	99.94
PRK06701	290	short chain dehydrogenase; Provisional	99.94
PRK07576	264	short chain dehydrogenase; Provisional	99.94
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	99.94
PRK06182	273	short chain dehydrogenase; Validated	99.94
PRK07041	230	short chain dehydrogenase; Provisional	99.94
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06057	255	short chain dehydrogenase; Provisional	99.93
PRK06523	260	short chain dehydrogenase; Provisional	99.93
PRK08263	275	short chain dehydrogenase; Provisional	99.93
PRK08213	259	gluconate 5-dehydrogenase; Provisional	99.93
PRK08628	258	short chain dehydrogenase; Provisional	99.93
PRK05650	270	short chain dehydrogenase; Provisional	99.93
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.93
PRK06171	266	sorbitol-6-phosphate 2-dehydrogenase; Provisional	99.93
PRK12937	245	short chain dehydrogenase; Provisional	99.93
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	99.93
PRK06123	248	short chain dehydrogenase; Provisional	99.93
PRK06180	277	short chain dehydrogenase; Provisional	99.93
PLN00015	308	protochlorophyllide reductase	99.93
PRK07024	257	short chain dehydrogenase; Provisional	99.93
PRK12939	250	short chain dehydrogenase; Provisional	99.93
PRK07832	272	short chain dehydrogenase; Provisional	99.93
PRK08278	273	short chain dehydrogenase; Provisional	99.93
PRK06947	248	glucose-1-dehydrogenase; Provisional	99.93
PRK07109	334	short chain dehydrogenase; Provisional	99.93
KOG1610	322	consensus Corticosteroid 11-beta-dehydrogenase and	99.93
PRK05993	277	short chain dehydrogenase; Provisional	99.93
TIGR03206	250	benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr	99.93
PRK06138	252	short chain dehydrogenase; Provisional	99.93
PRK12748	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.93
PRK12742	237	oxidoreductase; Provisional	99.93
PLN02780	320	ketoreductase/ oxidoreductase	99.93
PRK07825	273	short chain dehydrogenase; Provisional	99.93
KOG4169	261	consensus 15-hydroxyprostaglandin dehydrogenase an	99.92
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	99.92
PRK12824	245	acetoacetyl-CoA reductase; Provisional	99.92
TIGR01829	242	AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy	99.92
TIGR02685	267	pter_reduc_Leis pteridine reductase. Pteridine red	99.92
PRK12935	247	acetoacetyl-CoA reductase; Provisional	99.92
PRK05875	276	short chain dehydrogenase; Provisional	99.92
PRK06914	280	short chain dehydrogenase; Provisional	99.92
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK05866	293	short chain dehydrogenase; Provisional	99.92
PRK12428	241	3-alpha-hydroxysteroid dehydrogenase; Provisional	99.92
PRK06179	270	short chain dehydrogenase; Provisional	99.92
PRK07454	241	short chain dehydrogenase; Provisional	99.92
PRK06198	260	short chain dehydrogenase; Provisional	99.92
PRK12746	254	short chain dehydrogenase; Provisional	99.92
PRK07792	306	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.92
PRK06196	315	oxidoreductase; Provisional	99.92
PRK07074	257	short chain dehydrogenase; Provisional	99.92
PRK08267	260	short chain dehydrogenase; Provisional	99.91
PRK05693	274	short chain dehydrogenase; Provisional	99.91
PRK12744	257	short chain dehydrogenase; Provisional	99.91
PRK06194	287	hypothetical protein; Provisional	99.91
PRK07774	250	short chain dehydrogenase; Provisional	99.91
PRK05854	313	short chain dehydrogenase; Provisional	99.91
PRK09072	263	short chain dehydrogenase; Provisional	99.91
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	99.91
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	99.91
PRK06924	251	short chain dehydrogenase; Provisional	99.91
PRK12745	256	3-ketoacyl-(acyl-carrier-protein) reductase; Provi	99.91
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	99.91
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	99.91
KOG1014	312	consensus 17 beta-hydroxysteroid dehydrogenase typ	99.91
PRK07060	245	short chain dehydrogenase; Provisional	99.91
PRK06181	263	short chain dehydrogenase; Provisional	99.91
PRK09186	256	flagellin modification protein A; Provisional	99.91
PRK05884	223	short chain dehydrogenase; Provisional	99.91
COG0623	259	FabI Enoyl-[acyl-carrier-protein]	99.91
PRK07023	243	short chain dehydrogenase; Provisional	99.91
PRK06550	235	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.91
TIGR02632	676	RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc	99.91
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	99.91
PRK10538	248	malonic semialdehyde reductase; Provisional	99.91
PRK09730	247	putative NAD(P)-binding oxidoreductase; Provisiona	99.91
PRK07904	253	short chain dehydrogenase; Provisional	99.9
PRK08251	248	short chain dehydrogenase; Provisional	99.9
PRK06482	276	short chain dehydrogenase; Provisional	99.9
PRK07775	274	short chain dehydrogenase; Provisional	99.9
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK09134	258	short chain dehydrogenase; Provisional	99.9
PRK08703	239	short chain dehydrogenase; Provisional	99.9
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.9
PRK07577	234	short chain dehydrogenase; Provisional	99.9
TIGR01830	239	3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re	99.9
PRK06101	240	short chain dehydrogenase; Provisional	99.89
PRK12827	249	short chain dehydrogenase; Provisional	99.89
PRK06197	306	short chain dehydrogenase; Provisional	99.89
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	99.89
PRK07102	243	short chain dehydrogenase; Provisional	99.89
PRK07201	657	short chain dehydrogenase; Provisional	99.89
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	99.89
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.89
PRK08177	225	short chain dehydrogenase; Provisional	99.89
PRK08324	681	short chain dehydrogenase; Validated	99.89
PRK07578	199	short chain dehydrogenase; Provisional	99.89
KOG1611	249	consensus Predicted short chain-type dehydrogenase	99.89
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.88
PRK12829	264	short chain dehydrogenase; Provisional	99.88
PRK07326	237	short chain dehydrogenase; Provisional	99.88
PRK09135	249	pteridine reductase; Provisional	99.88
COG1028	251	FabG Dehydrogenases with different specificities (	99.88
PRK07453	322	protochlorophyllide oxidoreductase; Validated	99.88
PRK09291	257	short chain dehydrogenase; Provisional	99.88
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	99.87
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	99.86
PRK12828	239	short chain dehydrogenase; Provisional	99.86
PRK07806	248	short chain dehydrogenase; Provisional	99.86
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	99.86
KOG1208	314	consensus Dehydrogenases with different specificit	99.86
PRK12825	249	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.86
PRK08264	238	short chain dehydrogenase; Validated	99.85
PRK09009	235	C factor cell-cell signaling protein; Provisional	99.85
PRK06953	222	short chain dehydrogenase; Provisional	99.83
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	99.83
PRK08017	256	oxidoreductase; Provisional	99.83
KOG1204	253	consensus Predicted dehydrogenase [Secondary metab	99.82
PRK08219	227	short chain dehydrogenase; Provisional	99.8
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	99.78
PRK12367	245	short chain dehydrogenase; Provisional	99.71
smart00822	180	PKS_KR This enzymatic domain is part of bacterial	99.68
PF08659	181	KR: KR domain; InterPro: IPR013968 This domain is	99.64
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	99.61
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	99.59
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	99.57
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	99.53
PLN03209	576	translocon at the inner envelope of chloroplast su	99.45
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	99.43
KOG1478	341	consensus 3-keto sterol reductase [Lipid transport	99.38
PLN02896	353	cinnamyl-alcohol dehydrogenase	99.38
KOG1502	327	consensus Flavonol reductase/cinnamoyl-CoA reducta	99.36
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	99.35
PLN00198	338	anthocyanidin reductase; Provisional	99.34
PLN02650	351	dihydroflavonol-4-reductase	99.3
PLN02572	442	UDP-sulfoquinovose synthase	99.27
COG1087	329	GalE UDP-glucose 4-epimerase [Cell envelope biogen	99.25
PLN02214	342	cinnamoyl-CoA reductase	99.25
PRK10217	355	dTDP-glucose 4,6-dehydratase; Provisional	99.22
PLN02583	297	cinnamoyl-CoA reductase	99.21
PLN02686	367	cinnamoyl-CoA reductase	99.2
PLN02662	322	cinnamyl-alcohol dehydrogenase family protein	99.19
PRK06720	169	hypothetical protein; Provisional	99.18
TIGR01181	317	dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This	99.17
TIGR01179	328	galE UDP-glucose-4-epimerase. This enzyme intercon	99.15
PRK10675	338	UDP-galactose-4-epimerase; Provisional	99.15
TIGR01472	343	gmd GDP-mannose 4,6-dehydratase. Excluded from thi	99.13
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	99.1
PLN02240	352	UDP-glucose 4-epimerase	99.1
PLN02653	340	GDP-mannose 4,6-dehydratase	99.08
PLN02427	386	UDP-apiose/xylose synthase	99.08
COG1088	340	RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope	99.06
PF01073	280	3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso	99.05
TIGR03466	328	HpnA hopanoid-associated sugar epimerase. The sequ	99.05
PRK10084	352	dTDP-glucose 4,6 dehydratase; Provisional	99.02
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	98.99
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	98.97
PF01370	236	Epimerase: NAD dependent epimerase/dehydratase fam	98.96
COG1086	588	Predicted nucleoside-diphosphate sugar epimerases	98.89
PRK11908	347	NAD-dependent epimerase/dehydratase family protein	98.84
PRK08125	660	bifunctional UDP-glucuronic acid decarboxylase/UDP	98.82
TIGR01746	367	Thioester-redct thioester reductase domain. It has	98.81
KOG1371	343	consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo	98.77
PRK11150	308	rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro	98.77
PLN02260	668	probable rhamnose biosynthetic enzyme	98.76
PLN02695	370	GDP-D-mannose-3',5'-epimerase	98.76
KOG4022	236	consensus Dihydropteridine reductase DHPR/QDPR [Am	98.74
PF08643	299	DUF1776: Fungal family of unknown function (DUF177	98.74
PLN02657	390	3,8-divinyl protochlorophyllide a 8-vinyl reductas	98.73
TIGR01214	287	rmlD dTDP-4-dehydrorhamnose reductase. This enzyme	98.68
PF07993	249	NAD_binding_4: Male sterility protein; InterPro: I	98.67
PLN02725	306	GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas	98.66
PLN02166	436	dTDP-glucose 4,6-dehydratase	98.61
COG0451	314	WcaG Nucleoside-diphosphate-sugar epimerases [Cell	98.6
TIGR02197	314	heptose_epim ADP-L-glycero-D-manno-heptose-6-epime	98.57
CHL00194	317	ycf39 Ycf39; Provisional	98.55
PLN02206	442	UDP-glucuronate decarboxylase	98.54
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	98.48
PRK09987	299	dTDP-4-dehydrorhamnose reductase; Provisional	98.47
COG3320	382	Putative dehydrogenase domain of multifunctional n	98.4
COG1091	281	RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo	98.34
TIGR02114	227	coaB_strep phosphopantothenate--cysteine ligase, s	98.32
KOG0747	331	consensus Putative NAD+-dependent epimerases [Carb	98.31
PRK07201	657	short chain dehydrogenase; Provisional	98.29
PRK05865	854	hypothetical protein; Provisional	98.11
COG1089	345	Gmd GDP-D-mannose dehydratase [Cell envelope bioge	98.1
PF04321	286	RmlD_sub_bind: RmlD substrate binding domain; Inte	98.07
PRK08309	177	short chain dehydrogenase; Provisional	98.05
KOG1429	350	consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro	97.92
KOG1430	361	consensus C-3 sterol dehydrogenase/3-beta-hydroxys	97.89
PLN02996	491	fatty acyl-CoA reductase	97.87
PLN02260	668	probable rhamnose biosynthetic enzyme	97.86
PLN02778	298	3,5-epimerase/4-reductase	97.76
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	97.74
TIGR03443	1389	alpha_am_amid L-aminoadipate-semialdehyde dehydrog	97.73
TIGR03649	285	ergot_EASG ergot alkaloid biosynthesis protein, AF	97.63
PLN00016	378	RNA-binding protein; Provisional	97.39
TIGR01777	292	yfcH conserved hypothetical protein TIGR01777. Thi	97.15
PLN02503	605	fatty acyl-CoA reductase 2	97.09
PRK06732	229	phosphopantothenate--cysteine ligase; Validated	97.07
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.93
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	96.79
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.73
COG1090	297	Predicted nucleoside-diphosphate sugar epimerase [	96.72
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	96.59
KOG2733	423	consensus Uncharacterized membrane protein [Functi	96.33
KOG1431	315	consensus GDP-L-fucose synthetase [Carbohydrate tr	96.3
KOG2865	391	consensus NADH:ubiquinone oxidoreductase, NDUFA9/3	96.25
PRK12320	699	hypothetical protein; Provisional	96.18
PRK05579	399	bifunctional phosphopantothenoylcysteine decarboxy	96.04
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	95.68
PRK12548	289	shikimate 5-dehydrogenase; Provisional	95.65
COG4982	866	3-oxoacyl-[acyl-carrier protein]	95.42
KOG1372	376	consensus GDP-mannose 4,6 dehydratase [Carbohydrat	95.03
COG2910	211	Putative NADH-flavin reductase [General function p	94.6
COG0702	275	Predicted nucleoside-diphosphate-sugar epimerases	94.45
KOG1203	411	consensus Predicted dehydrogenase [Carbohydrate tr	94.14
TIGR00521	390	coaBC_dfp phosphopantothenoylcysteine decarboxylas	93.53
KOG1221	467	consensus Acyl-CoA reductase [Lipid transport and	91.44
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	91.24
COG3268	382	Uncharacterized conserved protein [Function unknow	90.97
KOG4288	283	consensus Predicted oxidoreductase [General functi	90.85
COG0569	225	TrkA K+ transport systems, NAD-binding component [	89.66
PRK09620	229	hypothetical protein; Provisional	89.55
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	89.45
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	88.99
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	88.74
PF06962	140	rRNA_methylase: Putative rRNA methylase; InterPro:	88.39
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	85.88
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	84.17
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	82.19
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	81.37
PF03848	192	TehB: Tellurite resistance protein TehB; InterPro:	81.21

>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]

Probab=100.00  E-value=6.3e-36  Score=206.70  Aligned_cols=173  Identities=22%  Similarity=0.259  Sum_probs=158.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++++....+++...+.+-+....+.||+++.++++..+++  +.++.+++||||||+...  ..+..+..
T Consensus        34 la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvlVncAGItrD--~~Llrmkq  111 (256)
T KOG1200|consen   34 LAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVLVNCAGITRD--GLLLRMKQ  111 (256)
T ss_pred             HHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEEEEcCccccc--cceeeccH
Confidence            68999999999999999999988887655788899999999999999999  788999999999999988  88889999


Q ss_pred             HHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           80 EKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      ++|+..+.+|+.                   ..+||++||+.+..+.-++..|+++|+.+.+|+|+.++|+++++||||.
T Consensus       112 ~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiGN~GQtnYAAsK~GvIgftktaArEla~knIrvN~  191 (256)
T KOG1200|consen  112 EQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIGNFGQTNYAASKGGVIGFTKTAARELARKNIRVNV  191 (256)
T ss_pred             HHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccccccchhhhhhcCceeeeeHHHHHHHhhcCceEeE
Confidence            999999999999                   3499999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +.||+|.|||+..++   +.-+++...-+  ||+|++++||
T Consensus       192 VlPGFI~tpMT~~mp---~~v~~ki~~~i--Pmgr~G~~Ee  227 (256)
T KOG1200|consen  192 VLPGFIATPMTEAMP---PKVLDKILGMI--PMGRLGEAEE  227 (256)
T ss_pred             eccccccChhhhhcC---HHHHHHHHccC--CccccCCHHH
Confidence            999999999998874   45566666666  9999999986

>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B

Probab=100.00  E-value=5.9e-33  Score=205.66  Aligned_cols=178  Identities=25%  Similarity=0.366  Sum_probs=150.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCC--CCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISN--MDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~--~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++.++++.......++.+|+++++++++++++  ..+ +++|++|||+|....  ...++.
T Consensus        15 ~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~   94 (241)
T PF13561_consen   15 ALAEEGANVILTDRNEEKLADALEELAKEYGAEVIQCDLSDEESVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLL   94 (241)
T ss_dssp             HHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGG
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCceEeecCcchHHHHHHHHHHHhhcCCCeEEEEecccccccccCCCChH
Confidence            378999999999999888654444443221133599999999999999999  778 999999999998654  126777


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC-CCeEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ-YDIRVN  139 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~-~~i~v~  139 (181)
                      +.+.++|+..+++|+.               .|+||++||..+..+.+++..|+++|+++++|+|+++.++++ +|||||
T Consensus        95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN  174 (241)
T PF13561_consen   95 DLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPMPGYSAYSASKAALEGLTRSLAKELAPKKGIRVN  174 (241)
T ss_dssp             GSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBSTTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEE
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccCccchhhHHHHHHHHHHHHHHHHHhccccCeeee
Confidence            8889999999999999               789999999999999999999999999999999999999999 999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++...... .++..+.+.+..  |++|+++|+|
T Consensus       175 ~V~pG~i~t~~~~~~~~-~~~~~~~~~~~~--pl~r~~~~~e  213 (241)
T PF13561_consen  175 AVSPGPIETPMTERIPG-NEEFLEELKKRI--PLGRLGTPEE  213 (241)
T ss_dssp             EEEESSBSSHHHHHHHT-HHHHHHHHHHHS--TTSSHBEHHH
T ss_pred             eecccceeccchhcccc-ccchhhhhhhhh--ccCCCcCHHH
Confidence            99999999998765543 456666677777  9999999976

...

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=100.00  E-value=5.4e-32  Score=201.84  Aligned_cols=176  Identities=19%  Similarity=0.196  Sum_probs=145.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~~   76 (181)
                      +|+++|++|++++|+. +..+..+++.. ..+.++.||+++.+++++++++  .+++++|++|||||.....  ..++.+
T Consensus        28 ~la~~G~~Vi~~~r~~-~~~~~~~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~  105 (252)
T PRK06079         28 AIKDQGATVIYTYQND-RMKKSLQKLVD-EEDLLVECDVASDESIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTD  105 (252)
T ss_pred             HHHHCCCEEEEecCch-HHHHHHHhhcc-CceeEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEEcccccccccccCCccc
Confidence            4789999999999984 44444455433 3678899999999999999998  6789999999999986431  146677


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .|+||++||.++..+.+.+..|+++|+++.+|+++|+.|++++||+||+|
T Consensus       106 ~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i  185 (252)
T PRK06079        106 TSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSERAIPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAI  185 (252)
T ss_pred             CCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCccccCCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEE
Confidence            899999999999997               57999999999888888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+|+|++...... .++..+...+..  |++|+++|+|
T Consensus       186 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  222 (252)
T PRK06079        186 SAGAVKTLAVTGIKG-HKDLLKESDSRT--VDGVGVTIEE  222 (252)
T ss_pred             ecCcccccccccCCC-hHHHHHHHHhcC--cccCCCCHHH
Confidence            999999997654322 334444555555  8899999975

>PRK08339 short chain dehydrogenase; Provisional

Probab=100.00  E-value=4.3e-32  Score=203.53  Aligned_cols=177  Identities=17%  Similarity=0.241  Sum_probs=149.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++...  .++.++.+|++|.+++++++++ .+++++|++|||||....  ..+.+.
T Consensus        27 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~iD~lv~nag~~~~--~~~~~~  104 (263)
T PRK08339         27 VLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEPDIFFFSTGGPKP--GYFMEM  104 (263)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCCcEEEECCCCCCC--CCcccC
Confidence            37889999999999988888777666432  3688999999999999999998 668899999999998665  677889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||.++..+.+....|+++|+++.+|+++++.|++++|||||+
T Consensus       105 ~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~  184 (263)
T PRK08339        105 SMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEPIPNIALSNVVRISMAGLVRTLAKELGPKGITVNG  184 (263)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCCCCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999987                 4899999999998888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcC-------C-ChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMG-------I-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++......       . .++..+.+.+..  |++|+++|+|
T Consensus       185 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  231 (263)
T PRK08339        185 IMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPI--PLGRLGEPEE  231 (263)
T ss_pred             EEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccC--CcccCcCHHH
Confidence            9999999998654321       0 123334444445  8899999875

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=99.98  E-value=8.7e-32  Score=193.41  Aligned_cols=165  Identities=22%  Similarity=0.227  Sum_probs=147.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.++++++..++.. +.+..+..|++|.+++..+++.  .+|+++|+||||||....  .++.+..
T Consensus        25 ~l~~~G~~vvl~aRR~drL~~la~~~~~-~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLvNNAGl~~g--~~~~~~~  101 (246)
T COG4221          25 ALAEAGAKVVLAARREERLEALADEIGA-GAALALALDVTDRAAVEAAIEALPEEFGRIDILVNNAGLALG--DPLDEAD  101 (246)
T ss_pred             HHHHCCCeEEEEeccHHHHHHHHHhhcc-CceEEEeeccCCHHHHHHHHHHHHHhhCcccEEEecCCCCcC--ChhhhCC
Confidence            3789999999999999999999999985 4799999999999999999998  889999999999999887  8999999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+.++++|+.                 .|+||++||+++..++|+...||++|+++..|+..|+.++.+++|||..|
T Consensus       102 ~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I  181 (246)
T COG4221         102 LDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVI  181 (246)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEe
Confidence            9999999999999                 78999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhc-CCChHHHHHHHHH
Q 042200          142 AHIVSATPFFCNAM-GIDKKTFKELLYA  168 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~-~~~~~~~~~~~~~  168 (181)
                      .||.+.|..+.... +-+.+..++++..
T Consensus       182 ~PG~v~~~~~s~v~~~g~~~~~~~~y~~  209 (246)
T COG4221         182 SPGLVETTEFSTVRFEGDDERADKVYKG  209 (246)
T ss_pred             cCceecceecccccCCchhhhHHHHhcc
Confidence            99999776544433 2245555555443

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.98  E-value=1.1e-31  Score=202.05  Aligned_cols=177  Identities=20%  Similarity=0.186  Sum_probs=139.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcC-CCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFD-SDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~-~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~   75 (181)
                      +|+++|++|++++|+....+.. +++. ..+...++++|++|.+++++++++  .+++++|++|||||.....  ..++.
T Consensus        28 ~la~~Ga~V~~~~r~~~~~~~~-~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  106 (271)
T PRK06505         28 QLAAQGAELAFTYQGEALGKRV-KPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYA  106 (271)
T ss_pred             HHHhCCCEEEEecCchHHHHHH-HHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCCCEEEECCccCCCccccCChh
Confidence            4789999999999986433322 2221 112235789999999999999999  7789999999999986431  13567


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++|++.+++|+.               +|+||++||.++..+.+.+..|+++|+|+.+|+++|+.|++++|||||+
T Consensus       107 ~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~  186 (271)
T PRK06505        107 DTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGSTRVMPNYNVMGVAKAALEASVRYLAADYGPQGIRVNA  186 (271)
T ss_pred             hcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCccccCCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            7899999999999988               4899999999998888999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.++|++.....+ .++..+...+..  |++|+++|+|
T Consensus       187 v~PG~i~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~pee  224 (271)
T PRK06505        187 ISAGPVRTLAGAGIGD-ARAIFSYQQRNS--PLRRTVTIDE  224 (271)
T ss_pred             EecCCccccccccCcc-hHHHHHHHhhcC--CccccCCHHH
Confidence            9999999998643321 112222233344  8899999975

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=2.8e-31  Score=198.85  Aligned_cols=176  Identities=16%  Similarity=0.140  Sum_probs=139.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~~   76 (181)
                      |+++|++|++++|+. ..++.++++... +...++.+|++|.++++++++.  .+++++|++|||||.....  ..++.+
T Consensus        30 la~~G~~v~~~~r~~-~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~  108 (260)
T PRK06603         30 AKKHGAELWFTYQSE-VLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVD  108 (260)
T ss_pred             HHHcCCEEEEEeCch-HHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCccEEEEccccCCcccccCcccc
Confidence            678999999999874 233333333221 2234679999999999999998  7789999999999975421  145677


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               +|+||++||.++..+.+.+..|++||+|+.+|+++|+.|++++||+||+|
T Consensus       109 ~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v  188 (260)
T PRK06603        109 TSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAEKVIPNYNVMGVAKAALEASVKYLANDMGENNIRVNAI  188 (260)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccccCCCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            889999999999988               58999999999888888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.++|++.....+ .++..+......  |++|+++|+|
T Consensus       189 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  225 (260)
T PRK06603        189 SAGPIKTLASSAIGD-FSTMLKSHAATA--PLKRNTTQED  225 (260)
T ss_pred             ecCcCcchhhhcCCC-cHHHHHHHHhcC--CcCCCCCHHH
Confidence            999999997543321 233334444445  8899999975

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.2e-31  Score=198.63  Aligned_cols=177  Identities=13%  Similarity=0.090  Sum_probs=139.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC---CCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM---DRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~---~~~~   74 (181)
                      +|+++|++|++++|+. +..+..+++... +....+.||++|.++++++++.  .+++++|++|||||+....   ...+
T Consensus        27 ~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  105 (261)
T PRK08690         27 ACREQGAELAFTYVVD-KLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFL  105 (261)
T ss_pred             HHHHCCCEEEEEcCcH-HHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCCcEEEECCccCCccccccchh
Confidence            3678999999998763 233333333222 2456789999999999999998  6789999999999986431   0123


Q ss_pred             ccCCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           75 LDTDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.+.+.|+..+++|+.                +|+||++||.++..+.+++..|+++|+|+.+|+++++.+++++||+|
T Consensus       106 ~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrV  185 (261)
T PRK08690        106 DSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGAVRAIPNYNVMGMAKASLEAGIRFTAACLGKEGIRC  185 (261)
T ss_pred             hhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccccccCCCCcccchhHHHHHHHHHHHHHHHhhhcCeEE
Confidence            45778899999999987                47899999999988889999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.....+ .++..+.+.+..  |++|+++|+|
T Consensus       186 n~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~pee  225 (261)
T PRK08690        186 NGISAGPIKTLAASGIAD-FGKLLGHVAAHN--PLRRNVTIEE  225 (261)
T ss_pred             EEEecCcccchhhhcCCc-hHHHHHHHhhcC--CCCCCCCHHH
Confidence            999999999998654422 233344444455  8899999976

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4e-31  Score=199.28  Aligned_cols=174  Identities=16%  Similarity=0.144  Sum_probs=139.2

Q ss_pred             CcccCCCEEEEeecchH---HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCC
Q 042200            1 VFIQHRAKVIIADVQDD---LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~   73 (181)
                      +|+++|++|++++|+.+   .+++..+++..  . .++.+|++|.+++++++++  .+++++|++|||||.....  ..+
T Consensus        26 ~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~--~-~~~~~Dv~d~~~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~  102 (274)
T PRK08415         26 ACFEQGAELAFTYLNEALKKRVEPIAQELGS--D-YVYELDVSKPEHFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGS  102 (274)
T ss_pred             HHHHCCCEEEEEecCHHHHHHHHHHHHhcCC--c-eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCccCcccccccc
Confidence            36789999999999853   33333333332  3 6789999999999999999  6789999999999985420  146


Q ss_pred             cccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|+..+++|+.               .|+||++||.++..+.+.+..|++||+|+.+|+++|+.|++++||+|
T Consensus       103 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrV  182 (274)
T PRK08415        103 FLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGVKYVPHYNVMGVAKAALESSVRYLAVDLGKKGIRV  182 (274)
T ss_pred             cccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCccCCCcchhhhhHHHHHHHHHHHHHHHhhhcCeEE
Confidence            678899999999999998               58999999998888888899999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHH-HHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKEL-LYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.....+  ......+ ....  |++|+++|+|
T Consensus       183 n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~--pl~r~~~ped  222 (274)
T PRK08415        183 NAISAGPIKTLAASGIGD--FRMILKWNEINA--PLKKNVSIEE  222 (274)
T ss_pred             EEEecCccccHHHhccch--hhHHhhhhhhhC--chhccCCHHH
Confidence            999999999987543321  1111222 2334  8899999875

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=6.5e-31  Score=196.99  Aligned_cols=177  Identities=15%  Similarity=0.113  Sum_probs=139.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC---CCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD---RTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~---~~~   74 (181)
                      +|+++|++|++++|+. ++++..+++... ..+..+.||++|.+++++++++  .+++++|++|||||.....+   ..+
T Consensus        27 ~la~~G~~vil~~r~~-~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~  105 (262)
T PRK07984         27 AMHREGAELAFTYQND-KLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYV  105 (262)
T ss_pred             HHHHCCCEEEEEecch-hHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCCCEEEECCccCCccccCCcch
Confidence            3688999999999873 344444444332 3567899999999999999999  67899999999999754310   124


Q ss_pred             ccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           75 LDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.++|+..+++|+.               +|+||++||.++..+.+.+..|+++|+|+++|+++++.|++++|||||
T Consensus       106 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn  185 (262)
T PRK07984        106 NAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVN  185 (262)
T ss_pred             hhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhcccCcEEe
Confidence            56788999999999987               588999999988888888999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.....+ ..+..+......  |++|+++|+|
T Consensus       186 ~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  224 (262)
T PRK07984        186 AISAGPIRTLAASGIKD-FRKMLAHCEAVT--PIRRTVTIED  224 (262)
T ss_pred             eeecCcccchHHhcCCc-hHHHHHHHHHcC--CCcCCCCHHH
Confidence            99999999987543321 122233333344  8899999875

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.97  E-value=1.1e-30  Score=194.75  Aligned_cols=174  Identities=24%  Similarity=0.284  Sum_probs=144.7

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.. ...+..+...  .++.++.+|+++.+++.+++++  ..++++|++|||||....  .++.+.
T Consensus        27 ~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~--~~~~~~  102 (251)
T PRK12481         27 GLAKAGADIVGVGVAEAPETQAQVEALG--RKFHFITADLIQQKDIDSIVSQAVEVMGHIDILINNAGIIRR--QDLLEF  102 (251)
T ss_pred             HHHHCCCEEEEecCchHHHHHHHHHHcC--CeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccC
Confidence            37889999999998642 3333333333  3788999999999999999998  667899999999998765  677788


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  +|+||++||..+..+.+....|+++|+++++|+++++.+++++||+||
T Consensus       103 ~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~girvn  182 (251)
T PRK12481        103 GNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGGIRVPSYTASKSAVMGLTRALATELSQYNINVN  182 (251)
T ss_pred             CHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            99999999999987                  379999999999988888999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++...... +++..+......  |++|+++|+|
T Consensus       183 ~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--p~~~~~~pee  221 (251)
T PRK12481        183 AIAPGYMATDNTAALRA-DTARNEAILERI--PASRWGTPDD  221 (251)
T ss_pred             EEecCCCccCchhhccc-ChHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998766432 333344455555  8899999875

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=99.97  E-value=8.6e-31  Score=192.90  Aligned_cols=150  Identities=18%  Similarity=0.235  Sum_probs=141.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.++++++.+++...  .++.++.+|+++.+++.++.++  .+.+.||++|||||....  +++.+
T Consensus        25 ~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~--g~f~~  102 (265)
T COG0300          25 QLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGGPIDVLVNNAGFGTF--GPFLE  102 (265)
T ss_pred             HHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCCcccEEEECCCcCCc--cchhh
Confidence            47899999999999999999999998764  5789999999999999999998  555789999999999888  89999


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .++++.++++++|+.                 .|+||+|+|.+++.+.|....|+++|+++.+|+++|+.|++++||+|.
T Consensus       103 ~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~  182 (265)
T COG0300         103 LSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPTPYMAVYSATKAFVLSFSEALREELKGTGVKVT  182 (265)
T ss_pred             CChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCCcchHHHHHHHHHHHHHHHHHHHHhcCCCeEEE
Confidence            999999999999999                 689999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccc
Q 042200          140 SIAHIVSATPFFC  152 (181)
Q Consensus       140 ~i~Pg~v~t~~~~  152 (181)
                      +++||.|.|+|++
T Consensus       183 ~v~PG~~~T~f~~  195 (265)
T COG0300         183 AVCPGPTRTEFFD  195 (265)
T ss_pred             EEecCcccccccc
Confidence            9999999999985

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=99.97  E-value=1e-30  Score=195.54  Aligned_cols=178  Identities=18%  Similarity=0.187  Sum_probs=141.5

Q ss_pred             CcccCCCEEEEeecchH--HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC--CCCC
Q 042200            1 VFIQHRAKVIIADVQDD--LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN--MDRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~--~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~--~~~~   73 (181)
                      +|+++|++|++++|+.+  +.++..+++... ..+.++.+|++|.++++++++.  .+++++|++|||||....  ...+
T Consensus        27 ~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~  106 (258)
T PRK07370         27 QLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGD  106 (258)
T ss_pred             HHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCc
Confidence            36789999998876432  233333444322 3567899999999999999999  678899999999997532  0146


Q ss_pred             cccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|++.+++|+.               .|+||++||..+..+.+.+..|+++|+|+.+|+++|+.|++++||+|
T Consensus       107 ~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~V  186 (258)
T PRK07370        107 FSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGGVRAIPNYNVMGVAKAALEASVRYLAAELGPKNIRV  186 (258)
T ss_pred             chhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccccccCCcccchhhHHHHHHHHHHHHHHHHhCcCCeEE
Confidence            778889999999999998               58999999999988889999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++...... .++..+......  |++|+++|+|
T Consensus       187 n~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~~~d  226 (258)
T PRK07370        187 NAISAGPIRTLASSAVGG-ILDMIHHVEEKA--PLRRTVTQTE  226 (258)
T ss_pred             EEEecCcccCchhhcccc-chhhhhhhhhcC--CcCcCCCHHH
Confidence            999999999998644321 223334444444  8899999875

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.8e-30  Score=194.16  Aligned_cols=177  Identities=16%  Similarity=0.164  Sum_probs=143.3

Q ss_pred             CcccCCCEEEEeecc---hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCC
Q 042200            1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~   73 (181)
                      +|+++|++|++++|+   .+.+++..+++.. .++.++.+|++|.+++++++++  .+++++|++|||||.....  ..+
T Consensus        28 ~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~  106 (257)
T PRK08594         28 SLHNAGAKLVFTYAGERLEKEVRELADTLEG-QESLLLPCDVTSDEEITACFETIKEEVGVIHGVAHCIAFANKEDLRGE  106 (257)
T ss_pred             HHHHCCCEEEEecCcccchHHHHHHHHHcCC-CceEEEecCCCCHHHHHHHHHHHHHhCCCccEEEECcccCCCCcCCCc
Confidence            378899999999875   3556666666542 3688899999999999999998  6789999999999976420  145


Q ss_pred             cccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|...+++|+.               +|+||++||..+..+.+.+..|+++|+|+.+|+++++.+++++||+|
T Consensus       107 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrv  186 (257)
T PRK08594        107 FLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGERVVQNYNVMGVAKASLEASVKYLANDLGKDGIRV  186 (257)
T ss_pred             cccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCccCCCCCchhHHHHHHHHHHHHHHHHHhhhcCCEE
Confidence            667888999999999987               58999999999988888899999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.....+ .++..+......  |++|+++|+|
T Consensus       187 n~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~p~~  226 (257)
T PRK08594        187 NAISAGPIRTLSAKGVGG-FNSILKEIEERA--PLRRTTTQEE  226 (257)
T ss_pred             eeeecCcccCHhHhhhcc-ccHHHHHHhhcC--CccccCCHHH
Confidence            999999999997543322 122233344444  7899998875

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=1.7e-30  Score=194.41  Aligned_cols=175  Identities=18%  Similarity=0.186  Sum_probs=141.9

Q ss_pred             CcccCCCEEEEeecchHH---HHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCC
Q 042200            1 VFIQHRAKVIIADVQDDL---CRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~---~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~   73 (181)
                      +|+++|++|++++|+.+.   +++..+++.   .+.++.||++|.+++++++++  .+++++|++|||||.....  ..+
T Consensus        31 ~la~~G~~v~l~~r~~~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~  107 (258)
T PRK07533         31 AFRALGAELAVTYLNDKARPYVEPLAEELD---APIFLPLDVREPGQLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGR  107 (258)
T ss_pred             HHHHcCCEEEEEeCChhhHHHHHHHHHhhc---cceEEecCcCCHHHHHHHHHHHHHHcCCCCEEEEcCccCCcccccCC
Confidence            378899999999998543   333333332   356889999999999999999  6789999999999975421  145


Q ss_pred             cccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|+..+++|+.               .|+||++||.++..+.+.+..|+++|+|+.+|+++|+.|++++||+|
T Consensus       108 ~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gI~V  187 (258)
T PRK07533        108 VVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAEKVVENYNLMGPVKAALESSVRYLAAELGPKGIRV  187 (258)
T ss_pred             cccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccccCCccchhhHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            677889999999999998               57999999998888888889999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||.++|++...... .++..++.....  |++|+++|+|
T Consensus       188 n~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~p~d  227 (258)
T PRK07533        188 HAISPGPLKTRAASGIDD-FDALLEDAAERA--PLRRLVDIDD  227 (258)
T ss_pred             EEEecCCcCChhhhccCC-cHHHHHHHHhcC--CcCCCCCHHH
Confidence            999999999998754422 223334444555  8899998875

>PRK07063 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.6e-30  Score=193.38  Aligned_cols=177  Identities=23%  Similarity=0.258  Sum_probs=148.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+.+++..+++..   ..++.++.+|+++.+++.+++++  .+++++|++|||||....  ....
T Consensus        26 ~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~  103 (260)
T PRK07063         26 AFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGPLDVLVNNAGINVF--ADPL  103 (260)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCC--CChh
Confidence            3788999999999999888887777653   24688999999999999999998  677899999999998655  5666


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+|
T Consensus       104 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrv  183 (260)
T PRK07063        104 AMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKIIPGCFPYPVAKHGLLGLTRALGIEYAARNVRV  183 (260)
T ss_pred             hCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            7888999999999988                 47999999999999989999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCC--ChH-HHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGI--DKK-TFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.......  +++ ..+......  |++|+++|+|
T Consensus       184 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~  227 (260)
T PRK07063        184 NAIAPGYIETQLTEDWWNAQPDPAAARAETLALQ--PMKRIGRPEE  227 (260)
T ss_pred             EEEeeCCccChhhhhhhhccCChHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999987654321  222 223334444  8899999875

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=99.97  E-value=2.9e-30  Score=193.24  Aligned_cols=180  Identities=25%  Similarity=0.323  Sum_probs=147.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC----CceEEEeeecCChhHHHHHHHh--cc-cCCccEEEEcccccCCCCCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDF--TK-FGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~--~~-~~~id~vi~~ag~~~~~~~~   73 (181)
                      +|++.|++|++++|+++.++.....+...    .++..+.||++++++++++++.  .+ +|++|++|||||..... .+
T Consensus        27 ~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~-~~  105 (270)
T KOG0725|consen   27 LLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLT-GS  105 (270)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCC-CC
Confidence            47899999999999999988887766542    4699999999999999999999  66 79999999999998763 37


Q ss_pred             cccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccc-hhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           74 TLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEAL-YDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +.+.+.+.|++++++|+.                  +|.|+++||.++..+.++. ..|+++|++++.|+|+++.|+.++
T Consensus       106 ~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~~~~~~~~~~Y~~sK~al~~ltr~lA~El~~~  185 (270)
T KOG0725|consen  106 ILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGVGPGPGSGVAYGVSKAALLQLTRSLAKELAKH  185 (270)
T ss_pred             hhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccccCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Confidence            889999999999999998                  6789999998888776655 799999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcCC--ChHHHHHHHHHhhcccccccccCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMGI--DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |||||+|+||.+.|++....++.  .+++.+........|++|+++|+|
T Consensus       186 gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~g~~~e  234 (270)
T KOG0725|consen  186 GIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRVGTPEE  234 (270)
T ss_pred             CcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCccCHHH
Confidence            99999999999999982211111  112222211111238999999976

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=99.97  E-value=5.3e-30  Score=191.69  Aligned_cols=179  Identities=16%  Similarity=0.149  Sum_probs=145.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++....++.++.+|++|.+++++++++  .+++++|+||||||.....+..+.+.+
T Consensus        19 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~   98 (259)
T PRK08340         19 ELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAG   98 (259)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCcccccccc
Confidence            367899999999999988887777765434688999999999999999998  677899999999997543114566778


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|...+++|+.                  .|+||++||..+..+.++...|+++|+++.+|+++|+.+++++||+||+
T Consensus        99 ~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~  178 (259)
T PRK08340         99 YSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEPMPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYT  178 (259)
T ss_pred             HHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence            8889888888865                  4789999999998888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC--------ChHH-HHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI--------DKKT-FKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++.+.....        .++. .+......  |++|+++|+|
T Consensus       179 v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  226 (259)
T PRK08340        179 VLLGSFDTPGARENLARIAEERGVSFEETWEREVLERT--PLKRTGRWEE  226 (259)
T ss_pred             eccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccC--CccCCCCHHH
Confidence            99999999986532110        1111 22333444  8899999975

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=3.5e-30  Score=194.06  Aligned_cols=174  Identities=21%  Similarity=0.225  Sum_probs=139.0

Q ss_pred             CcccCCCEEEEeecch---HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCC
Q 042200            1 VFIQHRAKVIIADVQD---DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~   73 (181)
                      +|+++|++|++++|+.   +.+++..+++.   ....+.+|+++.+++++++++  .+++++|++|||||.....  ..+
T Consensus        31 ~la~~G~~V~l~~r~~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~  107 (272)
T PRK08159         31 ACRAAGAELAFTYQGDALKKRVEPLAAELG---AFVAGHCDVTDEASIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGR  107 (272)
T ss_pred             HHHHCCCEEEEEcCchHHHHHHHHHHHhcC---CceEEecCCCCHHHHHHHHHHHHHhcCCCcEEEECCcccCccccccC
Confidence            3789999999998873   33333333332   356789999999999999999  6789999999999986421  146


Q ss_pred             cccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|+..+++|+.               .|+||++||.++..+.|.+..|+++|+|+.+|+++|+.+++++||+|
T Consensus       108 ~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~~~~p~~~~Y~asKaal~~l~~~la~el~~~gIrV  187 (272)
T PRK08159        108 YVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAEKVMPHYNVMGVAKAALEASVKYLAVDLGPKNIRV  187 (272)
T ss_pred             cccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccccCCCcchhhhhHHHHHHHHHHHHHHHhcccCeEE
Confidence            677889999999999987               58999999998888889999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHH-HHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELL-YASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e  181 (181)
                      |+|+||.++|++.....+  .+...++. ...  |++|+++|||
T Consensus       188 n~v~PG~v~T~~~~~~~~--~~~~~~~~~~~~--p~~r~~~pee  227 (272)
T PRK08159        188 NAISAGPIKTLAASGIGD--FRYILKWNEYNA--PLRRTVTIEE  227 (272)
T ss_pred             EEeecCCcCCHHHhcCCc--chHHHHHHHhCC--cccccCCHHH
Confidence            999999999987543321  12222222 234  8899999976

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.97  E-value=4.1e-30  Score=192.49  Aligned_cols=175  Identities=16%  Similarity=0.129  Sum_probs=137.9

Q ss_pred             CcccCCCEEEEeecc---hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC---C
Q 042200            1 VFIQHRAKVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD---R   72 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~---~   72 (181)
                      +|+++|++|++++|.   .+.+++..+++.   ....+.+|++|+++++++++.  .+++++|++|||||......   .
T Consensus        27 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~  103 (260)
T PRK06997         27 ACKREGAELAFTYVGDRFKDRITEFAAEFG---SDLVFPCDVASDEQIDALFASLGQHWDGLDGLVHSIGFAPREAIAGD  103 (260)
T ss_pred             HHHHCCCeEEEEccchHHHHHHHHHHHhcC---CcceeeccCCCHHHHHHHHHHHHHHhCCCcEEEEccccCCccccccc
Confidence            367899999998654   444444444433   235689999999999999999  67899999999999864310   1


Q ss_pred             CcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           73 TTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.+.+.++|+..+++|+.               .|+||++||.++..+.+.+..|+++|+|+.+|+++|+.+++++||+
T Consensus       104 ~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIr  183 (260)
T PRK06997        104 FLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERVVPNYNTMGLAKASLEASVRYLAVSLGPKGIR  183 (260)
T ss_pred             cchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEeccccccCCCCcchHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            2345788999999999998               5899999999998888889999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||+++|++...+.+ .++..+......  |++|+++|||
T Consensus       184 Vn~i~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  224 (260)
T PRK06997        184 ANGISAGPIKTLAASGIKD-FGKILDFVESNA--PLRRNVTIEE  224 (260)
T ss_pred             EEEEeeCccccchhccccc-hhhHHHHHHhcC--cccccCCHHH
Confidence            9999999999987544321 122233333444  8899999875

>PRK05867 short chain dehydrogenase; Provisional

Probab=99.97  E-value=8.1e-30  Score=190.07  Aligned_cols=173  Identities=28%  Similarity=0.333  Sum_probs=144.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++...++... .++..+.+|+++.+++.+++++  .+++++|+||||||....  .++.+.
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~  105 (253)
T PRK05867         28 AYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGIDIAVCNAGIITV--TPMLDM  105 (253)
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhC
Confidence            36889999999999998888877766543 4688899999999999999998  677899999999998766  677788


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccC-c-cchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIG-E-ALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~-~-~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +.++|+..+++|+.                  .++||++||..+.... + .+..|+++|+++++|+++++.+++++||+
T Consensus       106 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gI~  185 (253)
T PRK05867        106 PLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIINVPQQVSHYCASKAAVIHLTKAMAVELAPHKIR  185 (253)
T ss_pred             CHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCCCCCCccchHHHHHHHHHHHHHHHHHHhHhCeE
Confidence            99999999999998                  2579999998776543 3 45789999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||+++|++.....    +..+.+....  |++|+++|+|
T Consensus       186 vn~i~PG~v~t~~~~~~~----~~~~~~~~~~--~~~r~~~p~~  223 (253)
T PRK05867        186 VNSVSPGYILTELVEPYT----EYQPLWEPKI--PLGRLGRPEE  223 (253)
T ss_pred             EEEeecCCCCCcccccch----HHHHHHHhcC--CCCCCcCHHH
Confidence            999999999999865432    3334444455  7899999875

>PRK08589 short chain dehydrogenase; Validated

Probab=99.97  E-value=2.3e-29  Score=189.55  Aligned_cols=179  Identities=20%  Similarity=0.266  Sum_probs=144.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+ +.+++..+++... .++.++.+|+++.+++..++++  .+++++|+||||||..... ..+.+.
T Consensus        25 ~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~-~~~~~~  102 (272)
T PRK08589         25 ALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVDVLFNNAGVDNAA-GRIHEY  102 (272)
T ss_pred             HHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcCEEEECCCCCCCC-CCcccC
Confidence            367899999999999 7777766666432 4688999999999999999998  6778999999999986431 466678


Q ss_pred             CHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.+.|++.+++|+.                +|+||++||..+..+.+....|+++|+++++|+++++.++.++||+||+|
T Consensus       103 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v  182 (272)
T PRK08589        103 PVDVFDKIMAVDMRGTFLMTKMLLPLMMEQGGSIINTSSFSGQAADLYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAI  182 (272)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEeCchhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            88999999999987                47999999999998888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHH-HHHHHHH--hhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKT-FKELLYA--SANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~e  181 (181)
                      +||+++|++.....+..++. .+.+...  ...|++|+.+|+|
T Consensus       183 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (272)
T PRK08589        183 APGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGKPEE  225 (272)
T ss_pred             ecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcCHHH
Confidence            99999999876654322211 1112111  0127788888865

>PRK07478 short chain dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-29  Score=187.85  Aligned_cols=177  Identities=21%  Similarity=0.270  Sum_probs=145.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|+++.+++.+++++  .+++++|+||||||..... .++.+.
T Consensus        25 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~  103 (254)
T PRK07478         25 LFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLDIAFNNAGTLGEM-GPVAEM  103 (254)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCC-CChhhC
Confidence            36789999999999988888777766543 4688999999999999999998  6678999999999986432 566778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                 .++||++||..+. .+.+++..|++||++++.|+++++.++.++||+||
T Consensus       104 ~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  183 (254)
T PRK07478        104 SLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAGFPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVN  183 (254)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEE
Confidence            89999999999986                 4689999998886 56788899999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.+.... .++..+......  |++++.+|+|
T Consensus       184 ~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  222 (254)
T PRK07478        184 ALLPGGTDTPMGRAMGD-TPEALAFVAGLH--ALKRMAQPEE  222 (254)
T ss_pred             EEeeCcccCcccccccC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998765432 333222223333  7788888864

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=99.97  E-value=2.1e-29  Score=187.91  Aligned_cols=176  Identities=20%  Similarity=0.229  Sum_probs=149.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++...++... .++.++.+|+++.+++.++++.  .+++++|+||||||....  .++.+.
T Consensus        28 ~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  105 (254)
T PRK08085         28 GLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPIDVLINNAGIQRR--HPFTEF  105 (254)
T ss_pred             HHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--CChhhC
Confidence            36789999999999988888777766532 4678899999999999999988  667899999999998765  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.++...|+++|+++++++++++.+++++||++|+
T Consensus       106 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  185 (254)
T PRK08085        106 PEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELGRDTITPYAASKGAVKMLTRGMCVELARHNIQVNG  185 (254)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccCCCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEE
Confidence            99999999999987                 3789999999888888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++...... .++..+......  |++|+++|+|
T Consensus       186 v~pG~~~t~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~~  223 (254)
T PRK08085        186 IAPGYFKTEMTKALVE-DEAFTAWLCKRT--PAARWGDPQE  223 (254)
T ss_pred             EEeCCCCCcchhhhcc-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998766443 233334444444  8899999875

>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.97  E-value=9e-31  Score=178.35  Aligned_cols=172  Identities=22%  Similarity=0.183  Sum_probs=156.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|++.|++|+.+.|+++.+..++++-.+  -+..+..|+++++.+.+.+.  ..+.+|++|||||..-.  .+|.+++.+
T Consensus        26 ~La~aGA~ViAvaR~~a~L~sLV~e~p~--~I~Pi~~Dls~wea~~~~l~--~v~pidgLVNNAgvA~~--~pf~eiT~q   99 (245)
T KOG1207|consen   26 SLAKAGAQVIAVARNEANLLSLVKETPS--LIIPIVGDLSAWEALFKLLV--PVFPIDGLVNNAGVATN--HPFGEITQQ   99 (245)
T ss_pred             HHHhcCCEEEEEecCHHHHHHHHhhCCc--ceeeeEecccHHHHHHHhhc--ccCchhhhhccchhhhc--chHHHHhHH
Confidence            3788999999999999999999988776  68899999999999888887  56789999999999887  899999999


Q ss_pred             HHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           81 KVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        81 ~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +++..|++|+.                  .|.||++||.++.++..+...||++|+|+++++|+|+.|+++++||||.+.
T Consensus       100 ~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVN  179 (245)
T KOG1207|consen  100 SFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRPLDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVN  179 (245)
T ss_pred             hhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccccCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccC
Confidence            99999999998                  788999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |-.+-|+|.+.-+. +|..-..++..+  |++|+.+.+|
T Consensus       180 PTVVmT~MG~dnWS-DP~K~k~mL~ri--Pl~rFaEV~e  215 (245)
T KOG1207|consen  180 PTVVMTDMGRDNWS-DPDKKKKMLDRI--PLKRFAEVDE  215 (245)
T ss_pred             CeEEEecccccccC-CchhccchhhhC--chhhhhHHHH
Confidence            99999999877665 778888888888  8899987653

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.96  E-value=2.3e-29  Score=188.40  Aligned_cols=178  Identities=16%  Similarity=0.097  Sum_probs=144.1

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC----CC
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN----MD   71 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~----~~   71 (181)
                      +|+++|++|++++| +.+.++...+++...  .++.++.+|++|.+++++++++  .+++++|++|||||....    ..
T Consensus        27 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  106 (260)
T PRK08416         27 EFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDRVDFFISNAIISGRAVVGGY  106 (260)
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCccEEEECcccccccccccc
Confidence            37889999998865 566666665555321  4788999999999999999998  667899999999987531    01


Q ss_pred             CCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           72 RTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      .++.+.+.++|++.+++|+.                 .|+||++||..+..+.+.+..|+++|+++++|+++|+.+++++
T Consensus       107 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~  186 (260)
T PRK08416        107 TKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSSTGNLVYIENYAGHGTSKAAVETMVKYAATELGEK  186 (260)
T ss_pred             CChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEeccccccCCCCcccchhhHHHHHHHHHHHHHHhhhh
Confidence            45566778999999999886                 4799999999888888899999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+||+|+||+++|++...+.. .++..+.+.+..  |++|+++|+|
T Consensus       187 gi~v~~v~PG~i~T~~~~~~~~-~~~~~~~~~~~~--~~~r~~~p~~  230 (260)
T PRK08416        187 NIRVNAVSGGPIDTDALKAFTN-YEEVKAKTEELS--PLNRMGQPED  230 (260)
T ss_pred             CeEEEEEeeCcccChhhhhccC-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999999998766542 334444445555  7899998875

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=1.3e-29  Score=187.99  Aligned_cols=150  Identities=24%  Similarity=0.260  Sum_probs=134.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--C-ceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--E-LISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~-~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|+.++++.|...+++...+++.+.  . ++..++||++|.+++.+++++  .+||++|+||||||+...  ....
T Consensus        31 ~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg~vDvLVNNAG~~~~--~~~~  108 (282)
T KOG1205|consen   31 ELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFGRVDVLVNNAGISLV--GFLE  108 (282)
T ss_pred             HHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcCCCCEEEecCccccc--cccc
Confidence            47899999999999988887776665443  3 499999999999999999988  789999999999999885  7888


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC--e
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD--I  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~--i  136 (181)
                      ..+.++++++|++|++                 .|+||++||.+|+.+.|..+.|++||.|+++|+++|+.|+...+  |
T Consensus       109 ~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i  188 (282)
T KOG1205|consen  109 DTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIYSASKHALEGFFETLRQELIPLGTII  188 (282)
T ss_pred             cCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCcccccchHHHHHHHHHHHHHHHhhccCceE
Confidence            8999999999999999                 39999999999999999999999999999999999999999877  6


Q ss_pred             EEEEEecCcccCcccch
Q 042200          137 RVNSIAHIVSATPFFCN  153 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~  153 (181)
                      ++ .|+||+|.|++...
T Consensus       189 ~i-~V~PG~V~Te~~~~  204 (282)
T KOG1205|consen  189 II-LVSPGPIETEFTGK  204 (282)
T ss_pred             EE-EEecCceeecccch
Confidence            66 99999999996544

>PRK08265 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.3e-29  Score=187.05  Aligned_cols=175  Identities=18%  Similarity=0.254  Sum_probs=145.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|+++.+++.++++.  ..++++|+||||||....  .. .+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~ag~~~~--~~-~~~~   99 (261)
T PRK08265         25 ALVAAGARVAIVDIDADNGAAVAASLGE--RARFIATDITDDAAIERAVATVVARFGRVDILVNLACTYLD--DG-LASS   99 (261)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--eeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--Cc-CcCC
Confidence            3678999999999998888877777654  688999999999999999998  667899999999998654  33 3567


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|++.+++|+.                .|+||++||.++..+.+.+..|+++|+++..|+++++.++.++||++|+|+
T Consensus       100 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~  179 (261)
T PRK08265        100 RADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQTGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVS  179 (261)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEc
Confidence            8999999999988                478999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++.....+...+..+..... ..|++|+++|+|
T Consensus       180 PG~~~t~~~~~~~~~~~~~~~~~~~~-~~p~~r~~~p~d  217 (261)
T PRK08265        180 PGWTWSRVMDELSGGDRAKADRVAAP-FHLLGRVGDPEE  217 (261)
T ss_pred             cCCccChhhhhhcccchhHHHHhhcc-cCCCCCccCHHH
Confidence            99999998766543222222222222 127899998875

>PRK06114 short chain dehydrogenase; Provisional

Probab=99.96  E-value=5.4e-29  Score=185.79  Aligned_cols=175  Identities=22%  Similarity=0.230  Sum_probs=142.9

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+ .+++..+++... .++.++.+|+++++++.+++++  ..++++|+||||||....  ..+.+
T Consensus        27 ~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~  104 (254)
T PRK06114         27 GLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGALTLAVNAAGIANA--NPAEE  104 (254)
T ss_pred             HHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChHh
Confidence            36789999999999753 445555555332 3688899999999999999998  667899999999998765  67778


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCcc--chhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEA--LYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~--~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.++|+..+++|+.                 .++||++||..+..+.+.  +..|+++|+++++|+++++.++.++||+
T Consensus       105 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~  184 (254)
T PRK06114        105 MEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVNRGLLQAHYNASKAGVIHLSKSLAMEWVGRGIR  184 (254)
T ss_pred             CCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCeE
Confidence            899999999999988                 479999999988776553  6899999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||+++|++.... . ..+..+.+....  |++|+++|+|
T Consensus       185 v~~v~PG~i~t~~~~~~-~-~~~~~~~~~~~~--p~~r~~~~~d  224 (254)
T PRK06114        185 VNSISPGYTATPMNTRP-E-MVHQTKLFEEQT--PMQRMAKVDE  224 (254)
T ss_pred             EEEEeecCccCcccccc-c-chHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999986431 1 223334445555  8899999975

>PRK07062 short chain dehydrogenase; Provisional

Probab=99.96  E-value=4.6e-29  Score=187.12  Aligned_cols=178  Identities=17%  Similarity=0.216  Sum_probs=145.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+++++..+++...   .++.++.+|++|.+++.+++++  .+++++|+||||||....  ..+.+
T Consensus        28 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~  105 (265)
T PRK07062         28 LLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGGVDMLVNNAGQGRV--STFAD  105 (265)
T ss_pred             HHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhh
Confidence            6789999999999988887776665432   3688899999999999999998  678899999999998765  67788


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.+....|+++|+++.+|+++++.++.++||+||
T Consensus       106 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~asKaal~~~~~~la~e~~~~gi~v~  185 (265)
T PRK07062        106 TTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPEPHMVATSAARAGLLNLVKSLATELAPKGVRVN  185 (265)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            899999999999987                 479999999999988888999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCC---ChHHHHHHHH----HhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI---DKKTFKELLY----ASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|+++...+..   .....+.+.+    ....|++|+++|+|
T Consensus       186 ~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~  234 (265)
T PRK07062        186 SILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGRLGRPDE  234 (265)
T ss_pred             EEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCCCCCHHH
Confidence            999999999986543210   1111122211    11228899999875

>PRK06484 short chain dehydrogenase; Validated

Probab=99.96  E-value=5.4e-29  Score=202.82  Aligned_cols=176  Identities=23%  Similarity=0.285  Sum_probs=150.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++..+.+|++|.+++.+++++  .+++++|+||||||..... .++.+.+
T Consensus       288 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~~-~~~~~~~  364 (520)
T PRK06484        288 RFAAAGDRLLIIDRDAEGAKKLAEALGD--EHLSVQADITDEAAVESAFAQIQARWGRLDVLVNNAGIAEVF-KPSLEQS  364 (520)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--ceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCC-CChhhCC
Confidence            3788999999999999888888776654  677899999999999999998  6789999999999986431 5677789


Q ss_pred             HHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           79 NEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        79 ~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      .++|++.+++|+.               .|+||++||.++..+.+++..|+++|+++++|+++|+.++.++||+||+|+|
T Consensus       365 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~P  444 (520)
T PRK06484        365 AEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLALPPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAP  444 (520)
T ss_pred             HHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEe
Confidence            9999999999998               4799999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+++|++.....+..+...+.+.+..  |++|+++|+|
T Consensus       445 G~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  480 (520)
T PRK06484        445 GYIETPAVLALKASGRADFDSIRRRI--PLGRLGDPEE  480 (520)
T ss_pred             CCccCchhhhhccccHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999987654433333444555555  7888888875

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.96  E-value=4.5e-29  Score=186.53  Aligned_cols=175  Identities=18%  Similarity=0.085  Sum_probs=137.8

Q ss_pred             CcccCCCEEEEeecch--HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCc
Q 042200            1 VFIQHRAKVIIADVQD--DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~   74 (181)
                      +|+++|++|++++|+.  +.+++..+++..  ++.++.+|+++.+++++++++  .+++++|++|||||.....  ..++
T Consensus        28 ~la~~G~~v~l~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~  105 (256)
T PRK07889         28 VAQEQGAEVVLTGFGRALRLTERIAKRLPE--PAPVLELDVTNEEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNF  105 (256)
T ss_pred             HHHHCCCEEEEecCccchhHHHHHHHhcCC--CCcEEeCCCCCHHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCc
Confidence            3678999999999763  445555555544  577899999999999999998  6678999999999986431  1346


Q ss_pred             ccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           75 LDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.++|++.+++|+.               .|+||++++. +..+.+.+..|++||+++.+|+++|+.|++++||+||
T Consensus       106 ~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~-~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn  184 (256)
T PRK07889        106 LDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFD-ATVAWPAYDWMGVAKAALESTNRYLARDLGPRGIRVN  184 (256)
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeec-ccccCCccchhHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            67788999999999987               5789998865 3455677788999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccc-cccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKG-VVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e  181 (181)
                      +|+||.++|++.+.+.. .++..+.+.+..  |++ |+++|+|
T Consensus       185 ~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~p~e  224 (256)
T PRK07889        185 LVAAGPIRTLAAKAIPG-FELLEEGWDERA--PLGWDVKDPTP  224 (256)
T ss_pred             eeccCcccChhhhcccC-cHHHHHHHHhcC--ccccccCCHHH
Confidence            99999999998655432 233333444445  777 6888875

>PRK05872 short chain dehydrogenase; Provisional

Probab=99.96  E-value=7.3e-29  Score=188.99  Aligned_cols=177  Identities=22%  Similarity=0.258  Sum_probs=149.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.+++..+++.....+..+.||++|.+++.+++++  ..++++|+||||||....  .++.+.+.
T Consensus        29 l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~--~~~~~~~~  106 (296)
T PRK05872         29 LHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDVVVANAGIASG--GSVAQVDP  106 (296)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--cCcccCCH
Confidence            67899999999999999888877775334577788999999999999998  667899999999998766  78888999


Q ss_pred             HHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           80 EKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++|++.+++|+.                .|+||++||.++..+.+++..|+++|+++++|+++++.++.++||++++++|
T Consensus       107 ~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~P  186 (296)
T PRK05872        107 DAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAAPGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYL  186 (296)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEec
Confidence            999999999988                4789999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+++|++...... +....+.+....+.|++++.+|+|
T Consensus       187 g~v~T~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~~~~  223 (296)
T PRK05872        187 SWIDTDLVRDADA-DLPAFRELRARLPWPLRRTTSVEK  223 (296)
T ss_pred             Ccccchhhhhccc-cchhHHHHHhhCCCcccCCCCHHH
Confidence            9999998766433 223334444443336777777764

>PRK06172 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.6e-29  Score=184.44  Aligned_cols=178  Identities=27%  Similarity=0.330  Sum_probs=149.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+.+... .++.++.+|+++.+++.++++.  .+++++|++|||+|..... .++.+.
T Consensus        26 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~  104 (253)
T PRK06172         26 AFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLDYAFNNAGIEIEQ-GRLAEG  104 (253)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CChhhC
Confidence            36789999999999988777666655432 4688999999999999999988  6678999999999986541 446778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .+++|++||..+..+.+++..|+++|+++++|+++++.++.++||++++
T Consensus       105 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~  184 (253)
T PRK06172        105 SEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGAAPKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNA  184 (253)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            89999999999988                 3789999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.++|++.....+..++..+.+....  |++|+++|+|
T Consensus       185 i~PG~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~  223 (253)
T PRK06172        185 VCPAVIDTDMFRRAYEADPRKAEFAAAMH--PVGRIGKVEE  223 (253)
T ss_pred             EEeCCccChhhhhhcccChHHHHHHhccC--CCCCccCHHH
Confidence            99999999998776543444444455555  7788888864

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=99.96  E-value=6.9e-29  Score=188.75  Aligned_cols=177  Identities=15%  Similarity=0.132  Sum_probs=138.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC----------C----ceEEEeeec--CCh------------------hHHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD----------E----LISYVCCNV--TID------------------SDVK   46 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----------~----~~~~~~~D~--~~~------------------~~i~   46 (181)
                      +|+++|++|++ +|+.+.++.....+...          +    ....+.+|+  ++.                  ++++
T Consensus        30 ~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~v~  108 (303)
T PLN02730         30 ALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDTPEDVPEDVKTNKRYAGSSNWTVQ  108 (303)
T ss_pred             HHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCccccCchhhhcccccccCCHHHHH
Confidence            37899999999 78877776665444310          1    146788999  433                  4889


Q ss_pred             HHHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCcc
Q 042200           47 NVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEA  109 (181)
Q Consensus        47 ~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~  109 (181)
                      +++++  .++|++|+||||||.......++.+.+.++|++++++|+.               .|+||++||..+..+.+.
T Consensus       109 ~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p~  188 (303)
T PLN02730        109 EVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERIIPG  188 (303)
T ss_pred             HHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCCCC
Confidence            99998  6789999999999854321157788999999999999999               589999999999888876


Q ss_pred             c-hhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          110 L-YDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       110 ~-~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      . ..|+++|+|+++|+++|+.|+++ +|||||+|+||+++|++...+ ...++..+......  |++|+++|+|
T Consensus       189 ~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~-~~~~~~~~~~~~~~--pl~r~~~pee  259 (303)
T PLN02730        189 YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAI-GFIDDMIEYSYANA--PLQKELTADE  259 (303)
T ss_pred             CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcc-cccHHHHHHHHhcC--CCCCCcCHHH
Confidence            5 47999999999999999999986 899999999999999987653 21233333333344  7889988875

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=99.96  E-value=1.9e-28  Score=185.05  Aligned_cols=179  Identities=21%  Similarity=0.183  Sum_probs=146.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC-------
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM-------   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~-------   70 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++..++++  .+++++|+||||||.....       
T Consensus        29 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~  108 (278)
T PRK08277         29 ELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPCDILINGAGGNHPKATTDNEF  108 (278)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccccccc
Confidence            36789999999999988887777666433 4688999999999999999988  6678999999999965331       


Q ss_pred             ------CCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHH
Q 042200           71 ------DRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        71 ------~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~l  127 (181)
                            ..++.+.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|++++
T Consensus       109 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~l  188 (278)
T PRK08277        109 HELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLTKVPAYSAAKAAISNFTQWL  188 (278)
T ss_pred             ccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCCCCchhHHHHHHHHHHHHHH
Confidence                  024567788999999999988                 478999999999999999999999999999999999


Q ss_pred             HHHhcCCCeEEEEEecCcccCcccchhcCCC----hHHHHHHHHHhhcccccccccCC
Q 042200          128 CVELGQYDIRVNSIAHIVSATPFFCNAMGID----KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +.++.++||++|+|+||++.|++.+.+....    .+..+......  |++|+++|+|
T Consensus       189 a~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~d  244 (278)
T PRK08277        189 AVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAHT--PMGRFGKPEE  244 (278)
T ss_pred             HHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhccC--CccCCCCHHH
Confidence            9999999999999999999999865543211    22333344444  8899999875

>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated

Probab=99.96  E-value=2.7e-28  Score=181.98  Aligned_cols=174  Identities=18%  Similarity=0.216  Sum_probs=141.6

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|+++++... ...+.+..+.  .++..+.+|+++.+++.+++++  .+++++|++|||||....  ..+.+.
T Consensus        29 ~l~~~G~~vv~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~li~~Ag~~~~--~~~~~~  104 (253)
T PRK08993         29 GLAEAGCDIVGINIVEPTETIEQVTALG--RRFLSLTADLRKIDGIPALLERAVAEFGHIDILVNNAGLIRR--EDAIEF  104 (253)
T ss_pred             HHHHCCCEEEEecCcchHHHHHHHHhcC--CeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CCcccC
Confidence            36789999998887532 2222222332  3688999999999999999998  667899999999998765  677788


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|++.+++|+.                  .|+||++||..+..+.+....|+++|+|+++++++++.++.++||+||
T Consensus       105 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  184 (253)
T PRK08993        105 SEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGGIRVPSYTASKSGVMGVTRLMANEWAKHNINVN  184 (253)
T ss_pred             CHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            89999999999999                  268999999999888888899999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++...+.+ ++...+.+....  |++|+++|+|
T Consensus       185 ~v~pG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~p~e  223 (253)
T PRK08993        185 AIAPGYMATNNTQQLRA-DEQRSAEILDRI--PAGRWGLPSD  223 (253)
T ss_pred             EEeeCcccCcchhhhcc-chHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998765432 223333444555  7899999875

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=99.96  E-value=2.1e-28  Score=182.90  Aligned_cols=175  Identities=26%  Similarity=0.302  Sum_probs=144.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+ ++.++..+.+... .++.++.+|+++.+++.+++++  ..++++|++|||||....  .++.+.
T Consensus        34 ~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~  110 (258)
T PRK06935         34 ALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKIDILVNNAGTIRR--APLLEY  110 (258)
T ss_pred             HHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            367899999999998 4444443333221 3688999999999999999998  667899999999998765  677778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.+.++.|+++|+++++++++++.++.++||+||+
T Consensus       111 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  190 (258)
T PRK06935        111 KDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGGKFVPAYTASKHGVAGLTKAFANELAAYNIQVNA  190 (258)
T ss_pred             CHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCCCCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            88999999999988                 4789999999998888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.++|++...... .+...+...+..  |.+|+++|+|
T Consensus       191 i~PG~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  228 (258)
T PRK06935        191 IAPGYIKTANTAPIRA-DKNRNDEILKRI--PAGRWGEPDD  228 (258)
T ss_pred             EEeccccccchhhccc-ChHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999998654432 233344455555  7799988875

>PRK07831 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.6e-28  Score=182.84  Aligned_cols=174  Identities=22%  Similarity=0.399  Sum_probs=147.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+++++..+++...   .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+.+
T Consensus        38 l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~  115 (262)
T PRK07831         38 ALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLGRLDVLVNNAGLGGQ--TPVVD  115 (262)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCccc
Confidence            6789999999999988887776665431   3688999999999999999998  667899999999998665  67788


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|++.+++|+.                  .|+||+++|..+..+.+++..|+++|+++++++++++.+++++||+|
T Consensus       116 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v  195 (262)
T PRK07831        116 MTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRAQHGQAHYAAAKAGVMALTRCSALEAAEYGVRI  195 (262)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhCccCeEE
Confidence            889999999999988                  36899999999888888999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.....  .++..+.+....  |++|+++|+|
T Consensus       196 ~~i~Pg~~~t~~~~~~~--~~~~~~~~~~~~--~~~r~~~p~~  234 (262)
T PRK07831        196 NAVAPSIAMHPFLAKVT--SAELLDELAARE--AFGRAAEPWE  234 (262)
T ss_pred             EEEeeCCccCccccccc--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999865432  344445555554  7899998875

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=99.96  E-value=3.1e-28  Score=182.47  Aligned_cols=175  Identities=25%  Similarity=0.251  Sum_probs=141.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|+++.+++.+++++  .+++++|+||||||..... .++.+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~-~~~~~~~  101 (263)
T PRK06200         25 RFLAEGARVAVLERSAEKLASLRQRFGD--HVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFVGNAGIWDYN-TSLVDIP  101 (263)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--cceEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCcccC-CCcccCC
Confidence            3678999999999999888877766654  688899999999999999998  6778999999999985421 3454555


Q ss_pred             HHH----HHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           79 NEK----VKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        79 ~~~----~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .++    |++.+++|+.                .|+||+++|..+..+.++...|+++|+++++|+++++.+++++ |+|
T Consensus       102 ~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~~~-Irv  180 (263)
T PRK06200        102 AETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSFYPGGGGPLYTASKHAVVGLVRQLAYELAPK-IRV  180 (263)
T ss_pred             hhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhcC-cEE
Confidence            554    8888999988                5789999999998888888999999999999999999999985 999


Q ss_pred             EEEecCcccCcccchhc--------CCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAM--------GIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.....        ...++..+.+....  |++|+++|+|
T Consensus       181 n~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~e  229 (263)
T PRK06200        181 NGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAIT--PLQFAPQPED  229 (263)
T ss_pred             EEEeCCccccCCcCccccCCCCcccccccchhHHhhcCC--CCCCCCCHHH
Confidence            99999999999854211        11122333344444  8899999975

>PRK07035 short chain dehydrogenase; Provisional

Probab=99.96  E-value=3.5e-28  Score=181.06  Aligned_cols=176  Identities=21%  Similarity=0.293  Sum_probs=146.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|+++.++++.++++  ..++++|+||||||..... .++.+.+
T Consensus        28 l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~~  106 (252)
T PRK07035         28 LAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLDILVNNAAANPYF-GHILDTD  106 (252)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC-CCcccCC
Confidence            6789999999999988887777766433 4678899999999999999998  6678999999999975321 5566788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..+++|+.                 .++|+++||..+..+.+++..|++||+++++|+++++.++.++||++++|
T Consensus       107 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i  186 (252)
T PRK07035        107 LGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSPGDFQGIYSITKAAVISMTKAFAKECAPFGIRVNAL  186 (252)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEE
Confidence            8999999999988                 47899999999988889999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++...... .++..+......  |++|+.+|+|
T Consensus       187 ~PG~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  223 (252)
T PRK07035        187 LPGLTDTKFASALFK-NDAILKQALAHI--PLRRHAEPSE  223 (252)
T ss_pred             eeccccCcccccccC-CHHHHHHHHccC--CCCCcCCHHH
Confidence            999999998766543 334444444444  7788888875

>PRK07677 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6e-28  Score=179.88  Aligned_cols=175  Identities=21%  Similarity=0.205  Sum_probs=143.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+.+... .++.++.+|+++++++.+++++  ..++++|+||||||....  .++.+.+
T Consensus        21 l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lI~~ag~~~~--~~~~~~~   98 (252)
T PRK07677         21 FAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDALINNAAGNFI--CPAEDLS   98 (252)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCC--CCcccCC
Confidence            6789999999999988777766655422 4788999999999999999998  667899999999997654  6677889


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC-CCeEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ-YDIRVN  139 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~-~~i~v~  139 (181)
                      .++|+..+++|+.                  .|+||++||..+..+.+....|+++|+++++|+++|+.++.+ +||+++
T Consensus        99 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~  178 (252)
T PRK07677         99 VNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVN  178 (252)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCCCCCcchHHHHHHHHHHHHHHHHHhCcccCeEEE
Confidence            9999999999987                  479999999999888888899999999999999999999974 799999


Q ss_pred             EEecCcccCc-ccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATP-FFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|+ +...... +++..+...+..  |++|+++|+|
T Consensus       179 ~v~PG~v~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  218 (252)
T PRK07677        179 AIAPGPIERTGGADKLWE-SEEAAKRTIQSV--PLGRLGTPEE  218 (252)
T ss_pred             EEeecccccccccccccC-CHHHHHHHhccC--CCCCCCCHHH
Confidence            9999999964 3332222 344444455555  7788888874

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=5.2e-28  Score=180.48  Aligned_cols=176  Identities=20%  Similarity=0.202  Sum_probs=148.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+.+... .++.++.+|++|.++++.+++.  ..++++|+||||||....  .++.+.
T Consensus        29 ~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~--~~~~~~  106 (255)
T PRK07523         29 GLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPIDILVNNAGMQFR--TPLEDF  106 (255)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhC
Confidence            36789999999999988887777666542 4688999999999999999998  667899999999998766  778888


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++.+++|+.                 .|+||++||..+..+.+++..|+++|++++.++++++.+++++||+||+
T Consensus       107 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~  186 (255)
T PRK07523        107 PADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALARPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNA  186 (255)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccCCCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEE
Confidence            99999999999987                 4789999999888888899999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.++|++.....+ .+...+.+....  |++|+++|+|
T Consensus       187 i~pg~~~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  224 (255)
T PRK07523        187 IAPGYFDTPLNAALVA-DPEFSAWLEKRT--PAGRWGKVEE  224 (255)
T ss_pred             EEECcccCchhhhhcc-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998765433 233333334444  7899988875

>PRK08643 acetoin reductase; Validated

Probab=99.96  E-value=5.4e-28  Score=180.43  Aligned_cols=176  Identities=21%  Similarity=0.259  Sum_probs=145.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++...++... .++.++.+|+++.+++.+++++  .+++++|+||||||....  .++.+.+
T Consensus        22 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~   99 (256)
T PRK08643         22 LVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLNVVVNNAGVAPT--TPIETIT   99 (256)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCC
Confidence            6789999999999988877776666432 4688899999999999999998  677899999999998765  6777888


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                  .++||++||..+..+.++...|+++|++++.|++.++.++.++||+||+
T Consensus       100 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  179 (256)
T PRK08643        100 EEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGNPELAVYSSTKFAVRGLTQTAARDLASEGITVNA  179 (256)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCCCCCchhHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            9999999999986                  3689999999998888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC-------ChH-HHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI-------DKK-TFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~-------~~~-~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|+++....+.       .++ ....+....  |.+|+.+|+|
T Consensus       180 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  226 (256)
T PRK08643        180 YAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDI--TLGRLSEPED  226 (256)
T ss_pred             EeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccC--CCCCCcCHHH
Confidence            99999999987654321       111 123334444  7788888764

>PRK08303 short chain dehydrogenase; Provisional

Probab=99.96  E-value=2.5e-28  Score=186.58  Aligned_cols=179  Identities=13%  Similarity=0.112  Sum_probs=134.0

Q ss_pred             CcccCCCEEEEeecch----------HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcc-cc
Q 042200            1 VFIQHRAKVIIADVQD----------DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNA-GI   66 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~----------~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~a-g~   66 (181)
                      +|+++|++|++++|+.          +.++...+.+... .++.++.||+++.+++++++++  .+++++|++|||| |.
T Consensus        27 ~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~  106 (305)
T PRK08303         27 ELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVERIDREQGRLDILVNDIWGG  106 (305)
T ss_pred             HHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCccEEEECCccc
Confidence            3788999999999973          3444444444332 3678899999999999999999  7789999999999 74


Q ss_pred             cC--CCCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccc---cCccchhhHhhHHHHHHHH
Q 042200           67 IS--NMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATET---IGEALYDYLMSKYAVLGLM  124 (181)
Q Consensus        67 ~~--~~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~---~~~~~~~y~~sK~a~~~l~  124 (181)
                      ..  ....++.+.+.++|++.+++|+.                 .|+||++||..+..   +.+....|+++|+++.+|+
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~~~~~~~~~~~~Y~asKaal~~lt  186 (305)
T PRK08303        107 EKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAEYNATHYRLSVFYDLAKTSVNRLA  186 (305)
T ss_pred             ccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCccccccCcCCCCcchhHHHHHHHHHHH
Confidence            21  11145667788899999999987                 47999999976543   2335678999999999999


Q ss_pred             HHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcc-cccccccCC
Q 042200          125 KNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANL-KGVVLKAAD  181 (181)
Q Consensus       125 ~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~e  181 (181)
                      ++|+.+++++||+||+|+||+++|++........++.........  | ++++++|+|
T Consensus       187 ~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~pee  242 (305)
T PRK08303        187 FSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKE--PHFAISETPRY  242 (305)
T ss_pred             HHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccc--cccccCCCHHH
Confidence            999999999999999999999999986433211111122222233  4 577778875

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=99.96  E-value=6.3e-28  Score=181.05  Aligned_cols=177  Identities=20%  Similarity=0.259  Sum_probs=146.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+.+... .++.++.+|+++.+++.+++++  ..++++|+||||||....  .++.+.
T Consensus        29 ~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~  106 (265)
T PRK07097         29 AYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVIDILVNNAGIIKR--IPMLEM  106 (265)
T ss_pred             HHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCC--CCcccC
Confidence            36789999999999988887777666443 4788999999999999999998  667899999999998766  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+.++++|+.                 .++||++||..+..+.+++..|+++|++++.|+++++.++.++||+|++
T Consensus       107 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~  186 (265)
T PRK07097        107 SAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSELGRETVSAYAAAKGGLKMLTKNIASEYGEANIQCNG  186 (265)
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEE
Confidence            99999999999987                 5799999999888888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC----ChH-HHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI----DKK-TFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+.|++..+....    ... ..+......  |++|+++|+|
T Consensus       187 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  230 (265)
T PRK07097        187 IGPGYIATPQTAPLRELQADGSRHPFDQFIIAKT--PAARWGDPED  230 (265)
T ss_pred             EEeccccccchhhhhhccccccchhHHHHHHhcC--CccCCcCHHH
Confidence            99999999987554220    111 222223333  6677777764

>PRK12747 short chain dehydrogenase; Provisional

Probab=99.96  E-value=6.9e-28  Score=179.53  Aligned_cols=176  Identities=20%  Similarity=0.174  Sum_probs=140.7

Q ss_pred             CcccCCCEEEEee-cchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--c----ccC--CccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIAD-VQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--T----KFG--KLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~----~~~--~id~vi~~ag~~~~~   70 (181)
                      +|+++|++|++++ |+.+..++...++... ..+..+.+|+++.+++..++++  .    .++  ++|+||||||.... 
T Consensus        23 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~-  101 (252)
T PRK12747         23 RLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG-  101 (252)
T ss_pred             HHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCC-
Confidence            3778999998875 5666666666555432 4678899999999999888876  2    233  79999999998654 


Q ss_pred             CCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                       ..+.+.+.+.|++.+++|+.               .|+||++||.++..+.++...|++||+++++++++++.++.++|
T Consensus       102 -~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~g  180 (252)
T PRK12747        102 -AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG  180 (252)
T ss_pred             -CCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCcccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcC
Confidence             66778889999999999977               57999999999999889999999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |++|+|+||++.|++...... ++ ..+.+.... .|++|+++|+|
T Consensus       181 irvn~v~Pg~v~t~~~~~~~~-~~-~~~~~~~~~-~~~~~~~~~~d  223 (252)
T PRK12747        181 ITVNAILPGFIKTDMNAELLS-DP-MMKQYATTI-SAFNRLGEVED  223 (252)
T ss_pred             CEEEEEecCCccCchhhhccc-CH-HHHHHHHhc-CcccCCCCHHH
Confidence            999999999999998765432 22 233333222 26788888875

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.96  E-value=3.5e-28  Score=179.23  Aligned_cols=151  Identities=23%  Similarity=0.348  Sum_probs=140.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|+.+++.|.|.+..++++++++..++++.+.||+++.+++.+..++  .+.|.+|++|||||+...  .++.+.+
T Consensus        57 efa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~ILVNNAGI~~~--~~ll~~~  134 (300)
T KOG1201|consen   57 EFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDILVNNAGIVTG--KKLLDCS  134 (300)
T ss_pred             HHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceEEEeccccccC--CCccCCC
Confidence            478999999999999999999988887545799999999999999999999  778999999999999988  8888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc---CCCeEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG---QYDIRV  138 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~---~~~i~v  138 (181)
                      .+.+++++++|+.                 .|+||+++|.+|+.+.++..+||+||+|+.+|.++|+.|+.   ..||+.
T Consensus       135 d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~Ikt  214 (300)
T KOG1201|consen  135 DEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFGPAGLADYCASKFAAVGFHESLSMELRALGKDGIKT  214 (300)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccCCccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeE
Confidence            9999999999999                 89999999999999999999999999999999999999976   467999


Q ss_pred             EEEecCcccCcccch
Q 042200          139 NSIAHIVSATPFFCN  153 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~  153 (181)
                      ..++|++++|+|...
T Consensus       215 Tlv~P~~i~Tgmf~~  229 (300)
T KOG1201|consen  215 TLVCPYFINTGMFDG  229 (300)
T ss_pred             EEEeeeeccccccCC
Confidence            999999999998773

>PRK07985 oxidoreductase; Provisional

Probab=99.96  E-value=5.5e-28  Score=183.99  Aligned_cols=177  Identities=17%  Similarity=0.181  Sum_probs=142.1

Q ss_pred             CcccCCCEEEEeecc--hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQ--DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+  .+..++..+.+... .++.++.+|+++.+++.+++++  ..++++|++|||||..... .++.
T Consensus        68 ~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~-~~~~  146 (294)
T PRK07985         68 AYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGLDIMALVAGKQVAI-PDIA  146 (294)
T ss_pred             HHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCcCC-CChh
Confidence            377899999998864  23344443333221 3688899999999999999998  6788999999999975321 5677


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++|++.+++|+.               .++||++||..+..+.+.+..|+++|+++++|+++++.+++++||++|+
T Consensus       147 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~  226 (294)
T PRK07985        147 DLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNI  226 (294)
T ss_pred             hCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCCCCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEE
Confidence            7889999999999998               5789999999999888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++..... ..++..+.+.+..  |++|+++|+|
T Consensus       227 i~PG~v~t~~~~~~~-~~~~~~~~~~~~~--~~~r~~~ped  264 (294)
T PRK07985        227 VAPGPIWTALQISGG-QTQDKIPQFGQQT--PMKRAGQPAE  264 (294)
T ss_pred             EECCcCccccccccC-CCHHHHHHHhccC--CCCCCCCHHH
Confidence            999999999853321 1334444555555  8899999875

>PRK09242 tropinone reductase; Provisional

Probab=99.96  E-value=8e-28  Score=179.66  Aligned_cols=175  Identities=21%  Similarity=0.308  Sum_probs=149.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+.+++..+++...   .++.++.+|+++.+++.++++.  ..++++|+||||||....  .++.+
T Consensus        29 l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~  106 (257)
T PRK09242         29 FLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWDGLHILVNNAGGNIR--KAAID  106 (257)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhh
Confidence            6789999999999988887776665321   4688999999999999999998  678899999999998655  66778


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .++||++||.++..+.++...|+++|++++.|+++++.++.++||+++
T Consensus       107 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  186 (257)
T PRK09242        107 YTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHVRSGAPYGMTKAALLQMTRNLAVEWAEDGIRVN  186 (257)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCCCCCcchHHHHHHHHHHHHHHHHHHHHhCeEEE
Confidence            899999999999988                 478999999999888889999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++..+... .++..+......  |++++++|+|
T Consensus       187 ~i~Pg~i~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  225 (257)
T PRK09242        187 AVAPWYIRTPLTSGPLS-DPDYYEQVIERT--PMRRVGEPEE  225 (257)
T ss_pred             EEEECCCCCcccccccC-ChHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998766543 445555555555  7788888864

>TIGR01500 sepiapter_red sepiapterin reductase

Probab=99.96  E-value=1.2e-27  Score=178.73  Aligned_cols=176  Identities=16%  Similarity=0.142  Sum_probs=141.3

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCC----ccEEEEcccccCCCCCCc
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGK----LDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~----id~vi~~ag~~~~~~~~~   74 (181)
                      ++|++|++++|+.+.+++..+++..   ..++.++.+|+++.++++++++.  ..++.    .|+||||||.........
T Consensus        26 ~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~  105 (256)
T TIGR01500        26 SPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGF  105 (256)
T ss_pred             cCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhccccCCCceEEEEeCCcccCcccccc
Confidence            3799999999999888887777654   14688999999999999999988  44443    369999999754311222


Q ss_pred             ccC-CHHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           75 LDT-DNEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        75 ~~~-~~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      .+. +.++|+..+++|+.                   .++||++||..+..+.+.+..|+++|+++++|+++|+.+++++
T Consensus       106 ~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~  185 (256)
T TIGR01500       106 VDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCAIQPFKGWALYCAGKAARDMLFQVLALEEKNP  185 (256)
T ss_pred             ccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHhCCCCCCchHHHHHHHHHHHHHHHHHHHhcCC
Confidence            323 46889999999998                   1589999999999898999999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcC--CChHHHHHHHHHhhcccccccccCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMG--IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+||+|+||+++|++.+...+  .+++..+.+....  |++|+.+|+|
T Consensus       186 ~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~e  232 (256)
T TIGR01500       186 NVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELK--AKGKLVDPKV  232 (256)
T ss_pred             CeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHH--hcCCCCCHHH
Confidence            9999999999999998765432  1334444555555  8899999986

This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.

>PRK06125 short chain dehydrogenase; Provisional

Probab=99.96  E-value=8.8e-28  Score=179.67  Aligned_cols=174  Identities=18%  Similarity=0.171  Sum_probs=144.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++...  .++.++.+|+++.+++..+++  +++++|++|||+|....  ..+.+.+.
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~--~~g~id~lv~~ag~~~~--~~~~~~~~  102 (259)
T PRK06125         27 FAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAA--EAGDIDILVNNAGAIPG--GGLDDVDD  102 (259)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHH--HhCCCCEEEECCCCCCC--CCcccCCH
Confidence            6789999999999988887776666432  468899999999999999887  45789999999998765  77888999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+.++++|+.                 .|+||++||..+..+.+.+..|+++|+++++|+++++.++.++||+||+|+
T Consensus       103 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~  182 (259)
T PRK06125        103 AAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENPDADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVN  182 (259)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCCCCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEe
Confidence            999999999998                 478999999988888788889999999999999999999999999999999


Q ss_pred             cCcccCcccchhcC-------CChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMG-------IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+++|++......       .+++..+.+....  |++|+.+|+|
T Consensus       183 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  226 (259)
T PRK06125        183 PGPVATDRMLTLLKGRARAELGDESRWQELLAGL--PLGRPATPEE  226 (259)
T ss_pred             cCccccHHHHHHHHhhhhcccCCHHHHHHHhccC--CcCCCcCHHH
Confidence            99999997544321       1233444444555  7788888875

>PRK06128 oxidoreductase; Provisional

Probab=99.96  E-value=6.6e-28  Score=184.04  Aligned_cols=176  Identities=15%  Similarity=0.199  Sum_probs=142.9

Q ss_pred             cccCCCEEEEeecch--HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQD--DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++++.  ...++..+.+... .++.++.||+++.+++++++++  ..++++|+||||||..... ..+.+
T Consensus        75 l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lV~nAg~~~~~-~~~~~  153 (300)
T PRK06128         75 FAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGGLDILVNIAGKQTAV-KDIAD  153 (300)
T ss_pred             HHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CChhh
Confidence            678999999988753  2334444444322 3688999999999999999998  6678999999999975432 56778


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .++||++||..+..+.+.+..|+++|+++++|+++|+.++.++||+||+|
T Consensus       154 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v  233 (300)
T PRK06128        154 ITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPSPTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAV  233 (300)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEE
Confidence            899999999999998               46999999999998888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++..... ..++..+.+....  |++|+++|+|
T Consensus       234 ~PG~i~t~~~~~~~-~~~~~~~~~~~~~--p~~r~~~p~d  270 (300)
T PRK06128        234 APGPVWTPLQPSGG-QPPEKIPDFGSET--PMKRPGQPVE  270 (300)
T ss_pred             EECcCcCCCcccCC-CCHHHHHHHhcCC--CCCCCcCHHH
Confidence            99999999864321 1344455554455  8899998875

>PRK06940 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-27  Score=180.89  Aligned_cols=167  Identities=17%  Similarity=0.217  Sum_probs=134.2

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      .+|++|++++|+.+++++..+++... .++.++.+|++|.+++.++++. .+++++|+||||||....         .++
T Consensus        22 ~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~li~nAG~~~~---------~~~   92 (275)
T PRK06940         22 GAGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGLVHTAGVSPS---------QAS   92 (275)
T ss_pred             hCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEEEECCCcCCc---------hhh
Confidence            37999999999988887776666432 4688999999999999999988 667899999999997421         256


Q ss_pred             HHHhhheeec---------------ceeEEEeccccccccC------------------------------ccchhhHhh
Q 042200           82 VKRVMIMVVF---------------LGVLLFTANLATETIG------------------------------EALYDYLMS  116 (181)
Q Consensus        82 ~~~~~~~n~~---------------~~~iv~iss~~~~~~~------------------------------~~~~~y~~s  116 (181)
                      |+.++++|+.               .|++|+++|.++..+.                              +++..|++|
T Consensus        93 ~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~as  172 (275)
T PRK06940         93 PEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALATTPTEELLSLPFLQPDAIEDSLHAYQIA  172 (275)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccccccccccccccccccccCCccchhHHH
Confidence            8889999988               5788999998876542                              246789999


Q ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcC-CChHHHHHHHHHhhcccccccccCC
Q 042200          117 KYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG-IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       117 K~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+..++++++.++.++||+||+|+||+++|++...... ..++..+...+..  |++|+++|||
T Consensus       173 Kaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~pee  236 (275)
T PRK06940        173 KRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKS--PAGRPGTPDE  236 (275)
T ss_pred             HHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhC--CcccCCCHHH
Confidence            9999999999999999999999999999999998754322 1233344455555  8899999875

>PRK07791 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-27  Score=181.77  Aligned_cols=149  Identities=23%  Similarity=0.270  Sum_probs=131.2

Q ss_pred             CcccCCCEEEEeecch---------HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccC
Q 042200            1 VFIQHRAKVIIADVQD---------DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~   68 (181)
                      +|+++|++|++++|+.         +.+++..+++... .++.++.+|+++.+++.++++.  .+++++|++|||||...
T Consensus        25 ~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~  104 (286)
T PRK07791         25 AFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDAAVETFGGLDVLVNNAGILR  104 (286)
T ss_pred             HHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCC
Confidence            3678999999998875         6666766666443 4688899999999999999998  67899999999999876


Q ss_pred             CCCCCcccCCHHHHHHhhheeec---------------c--------eeEEEeccccccccCccchhhHhhHHHHHHHHH
Q 042200           69 NMDRTTLDTDNEKVKRVMIMVVF---------------L--------GVLLFTANLATETIGEALYDYLMSKYAVLGLMK  125 (181)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~n~~---------------~--------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  125 (181)
                      .  ..+.+.+.++|+..+++|+.               .        |+||++||.++..+.+++..|+++|+|+++|++
T Consensus       105 ~--~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~  182 (286)
T PRK07791        105 D--RMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGLQGSVGQGNYSAAKAGIAALTL  182 (286)
T ss_pred             C--CCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhCcCCCCchhhHHHHHHHHHHHH
Confidence            5  67788999999999999998               1        589999999999999999999999999999999


Q ss_pred             HHHHHhcCCCeEEEEEecCcccCcccc
Q 042200          126 NLCVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       126 ~la~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      +++.|++++||+||+|+|| +.|++..
T Consensus       183 ~la~el~~~gIrVn~v~Pg-~~T~~~~  208 (286)
T PRK07791        183 VAAAELGRYGVTVNAIAPA-ARTRMTE  208 (286)
T ss_pred             HHHHHHHHhCeEEEEECCC-CCCCcch
Confidence            9999999999999999999 7888753

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=99.95  E-value=2e-27  Score=178.02  Aligned_cols=175  Identities=26%  Similarity=0.274  Sum_probs=137.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++.......  ++..+.+|+++.+++.+++++  .+++++|+||||||..... .++.+.+
T Consensus        24 ~l~~~G~~V~~~~r~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~-~~~~~~~  100 (262)
T TIGR03325        24 RFVAEGARVAVLDKSAAGLQELEAAHGD--AVVGVEGDVRSLDDHKEAVARCVAAFGKIDCLIPNAGIWDYS-TALVDIP  100 (262)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHhhcCC--ceEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCccC-CccccCC
Confidence            3688999999999998877776554333  688899999999999999988  6778999999999975321 2333333


Q ss_pred             H----HHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           79 N----EKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        79 ~----~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .    +.|+..+++|+.                .|++|+++|..+..+.+....|+++|+++++|+++++.+++++ |+|
T Consensus       101 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~-irv  179 (262)
T TIGR03325       101 DDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGFYPNGGGPLYTAAKHAVVGLVKELAFELAPY-VRV  179 (262)
T ss_pred             chhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEeccceecCCCCCchhHHHHHHHHHHHHHHHHhhccC-eEE
Confidence            3    578999999998                4689999999888888888899999999999999999999987 999


Q ss_pred             EEEecCcccCcccchhc-C-CC----hHHHHHHHH-HhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAM-G-ID----KKTFKELLY-ASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~-~-~~----~~~~~~~~~-~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++..... . ..    ....++..+ ..  |++|+++|+|
T Consensus       180 n~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~e  227 (262)
T TIGR03325       180 NGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVL--PIGRMPDAEE  227 (262)
T ss_pred             EEEecCCCcCCCccccccccccccccccchhhhhhhcC--CCCCCCChHH
Confidence            99999999999864321 0 01    111233333 34  8899999986

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK08936 glucose-1-dehydrogenase; Provisional

Probab=99.95  E-value=1.9e-27  Score=178.08  Aligned_cols=175  Identities=25%  Similarity=0.289  Sum_probs=143.3

Q ss_pred             cccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+ .+..+....++... .++.++.+|+++.+++.++++.  .+++++|++|||||....  .++.+.
T Consensus        27 l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~  104 (261)
T PRK08936         27 FGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGTLDVMINNAGIENA--VPSHEM  104 (261)
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            67899999998885 44555555554332 4688899999999999999988  667899999999998766  677788


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|++.+++|+.                  .|+||++||..+..+.+++..|+++|+|+..++++++.++.++||+|+
T Consensus       105 ~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  184 (261)
T PRK08936        105 SLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIPWPLFVHYAASKGGVKLMTETLAMEYAPKGIRVN  184 (261)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCCCCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            89999999999975                  378999999998888899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++....+. .++.........  |++++.+|+|
T Consensus       185 ~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  223 (261)
T PRK08936        185 NIGPGAINTPINAEKFA-DPKQRADVESMI--PMGYIGKPEE  223 (261)
T ss_pred             EEEECcCCCCccccccC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998654332 344444444444  7788888764

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=99.95  E-value=3e-27  Score=175.60  Aligned_cols=174  Identities=22%  Similarity=0.197  Sum_probs=141.3

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.. ...+....+.  .++.++.+|+++.+++..++++  ..++++|++|||||....  ..+.+.
T Consensus        24 ~l~~~G~~vi~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~--~~~~~~   99 (248)
T TIGR01832        24 GLAEAGADIVGAGRSEPSETQQQVEALG--RRFLSLTADLSDIEAIKALVDSAVEEFGHIDILVNNAGIIRR--ADAEEF   99 (248)
T ss_pred             HHHHCCCEEEEEcCchHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            36789999999999752 2333333333  3688999999999999999988  566889999999998765  667778


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.+.|+..+++|+.                  .|+||++||..+..+.+....|+++|+++++++++++.++.++||+||
T Consensus       100 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~  179 (248)
T TIGR01832       100 SEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGGIRVPSYTASKHGVAGLTKLLANEWAAKGINVN  179 (248)
T ss_pred             CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCCCCCchhHHHHHHHHHHHHHHHHHhCccCcEEE
Confidence            88999999999987                  268999999988888888899999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.+.+.. .+...+......  |.+|+.+|+|
T Consensus       180 ~v~pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  218 (248)
T TIGR01832       180 AIAPGYMATNNTQALRA-DEDRNAAILERI--PAGRWGTPDD  218 (248)
T ss_pred             EEEECcCcCcchhcccc-ChHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998765432 233334444555  7788888865

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=99.95  E-value=2.5e-27  Score=176.86  Aligned_cols=173  Identities=26%  Similarity=0.361  Sum_probs=144.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+..+....++... .++.++.+|+++.+++.++++.  ..++++|++|||||....  ..+ +.+
T Consensus        31 l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~d~li~~ag~~~~--~~~-~~~  107 (255)
T PRK06113         31 FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKVDILVNNAGGGGP--KPF-DMP  107 (255)
T ss_pred             HHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCC-CCC
Confidence            6789999999999988777766655432 4688899999999999999888  667899999999998654  444 578


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .++||++||..+..+.+++..|+++|+++++|+++++.++.++||++|+|
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v  187 (255)
T PRK06113        108 MADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGI  187 (255)
T ss_pred             HHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEE
Confidence            8999999999988                 36999999999998888999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++.....  .++..+...+..  |++++++|+|
T Consensus       188 ~pg~~~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  223 (255)
T PRK06113        188 APGAILTDALKSVI--TPEIEQKMLQHT--PIRRLGQPQD  223 (255)
T ss_pred             eccccccccccccc--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999866542  334444455555  7788888865

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=99.95  E-value=4.1e-27  Score=175.82  Aligned_cols=175  Identities=23%  Similarity=0.275  Sum_probs=145.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+..++..+++..  ++.++.+|+++.+++..+++.  .+++++|++|||||....  .++.+.+
T Consensus        25 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~  100 (257)
T PRK07067         25 RYLAEGARVVIADIKPARARLAALEIGP--AAIAVSLDVTRQDSIDRIVAAAVERFGGIDILFNNAALFDM--APILDIS  100 (257)
T ss_pred             HHHHcCCEEEEEcCCHHHHHHHHHHhCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCC
Confidence            3678999999999999888877776654  688999999999999999998  667899999999998765  6777888


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                  .++||++||..+..+.++...|++||++++.|+++++.++.++||+++.
T Consensus       101 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  180 (257)
T PRK07067        101 RDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGEALVSHYCATKAAVISYTQSAALALIRHGINVNA  180 (257)
T ss_pred             HHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCCCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEE
Confidence            9999999999988                  2689999999888888999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcC-------C-ChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMG-------I-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|+++.....       . ..+..+.+....  |++|+++|+|
T Consensus       181 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  227 (257)
T PRK07067        181 IAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAV--PLGRMGVPDD  227 (257)
T ss_pred             EeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcC--CCCCccCHHH
Confidence            9999999997653210       0 112222233333  7899888875

>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=4e-27  Score=175.94  Aligned_cols=171  Identities=18%  Similarity=0.156  Sum_probs=137.2

Q ss_pred             CcccCCCEEEEeecc-----------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccc
Q 042200            1 VFIQHRAKVIIADVQ-----------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGI   66 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~   66 (181)
                      +|+++|++|++++|.           .+...+..+++... .++.++.+|+++.+++.+++++  ..++++|++|||||.
T Consensus        27 ~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~  106 (256)
T PRK12859         27 ELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAY  106 (256)
T ss_pred             HHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCC
Confidence            367899999987642           23333333444332 4788999999999999999998  667899999999998


Q ss_pred             cCCCCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHH
Q 042200           67 ISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        67 ~~~~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      ...  .++.+.+.++|+..+++|+.                 .|+||++||..+..+.+++..|+++|+++++|+++++.
T Consensus       107 ~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~  184 (256)
T PRK12859        107 STN--NDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRIINMTSGQFQGPMVGELAYAATKGAIDALTSSLAA  184 (256)
T ss_pred             CCC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEEcccccCCCCCCchHHHHHHHHHHHHHHHHHH
Confidence            765  67888999999999999999                 57999999999998899999999999999999999999


Q ss_pred             HhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          130 ELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++++||++++|+||+++|++..      ++..+.+....  |++++.+|+|
T Consensus       185 ~~~~~~i~v~~v~PG~i~t~~~~------~~~~~~~~~~~--~~~~~~~~~d  228 (256)
T PRK12859        185 EVAHLGITVNAINPGPTDTGWMT------EEIKQGLLPMF--PFGRIGEPKD  228 (256)
T ss_pred             HhhhhCeEEEEEEEccccCCCCC------HHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999999999998632      12222233333  6677777654

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.95  E-value=4.5e-27  Score=175.46  Aligned_cols=173  Identities=24%  Similarity=0.278  Sum_probs=136.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++++.+...+.....    .+.++.+|+++++++.+++++  ..++++|+||||||....  .++.+.+
T Consensus        26 ~l~~~G~~v~~~~~~~~~~~~~l~~~----~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~   99 (255)
T PRK06463         26 AFLREGAKVAVLYNSAENEAKELREK----GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLVNNAGIMYL--MPFEEFD   99 (255)
T ss_pred             HHHHCCCEEEEEeCCcHHHHHHHHhC----CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CChhhCC
Confidence            36789999998877544332222211    477899999999999999998  667899999999998765  6777888


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccc-cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATET-IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                 .++||++||..+.. +.++...|++||+|+++|+++++.++.++||+||+
T Consensus       100 ~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~  179 (255)
T PRK06463        100 EEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTAAEGTTFYAITKAGIIILTRRLAFELGKYGIRVNA  179 (255)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCCCCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            9999999999988                 47999999988774 34667889999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCC--hHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGID--KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++........  +...+.+..+.  |++|+++|+|
T Consensus       180 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  220 (255)
T PRK06463        180 VAPGWVETDMTLSGKSQEEAEKLRELFRNKT--VLKTTGKPED  220 (255)
T ss_pred             EeeCCCCCchhhcccCccchHHHHHHHHhCC--CcCCCcCHHH
Confidence            999999999875432211  12233334444  7888888875

>PRK06398 aldose dehydrogenase; Validated

Probab=99.95  E-value=2.5e-27  Score=177.23  Aligned_cols=166  Identities=24%  Similarity=0.321  Sum_probs=137.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+..          .++.++.||+++.+++.+++++  .+++++|+||||||....  .++.+.+
T Consensus        25 ~l~~~G~~Vi~~~r~~~~~----------~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~~   92 (258)
T PRK06398         25 RLKEEGSNVINFDIKEPSY----------NDVDYFKVDVSNKEQVIKGIDYVISKYGRIDILVNNAGIESY--GAIHAVE   92 (258)
T ss_pred             HHHHCCCeEEEEeCCcccc----------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCC
Confidence            3678999999999976432          1578899999999999999998  677899999999998765  7788889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.+++..|+++|++++.|+++++.++.++ |+||+|
T Consensus        93 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaal~~~~~~la~e~~~~-i~vn~i  171 (258)
T PRK06398         93 EDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAVTRNAAAYVTSKHAVLGLTRSIAVDYAPT-IRCVAV  171 (258)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccCCCCCchhhhhHHHHHHHHHHHHHHhCCC-CEEEEE
Confidence            9999999999998                 4799999999999888999999999999999999999999886 999999


Q ss_pred             ecCcccCcccchhcC----CChHHH----HHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMG----IDKKTF----KELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++......    .+++..    +.+....  |++|+++|+|
T Consensus       172 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~e  217 (258)
T PRK06398        172 CPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMH--PMKRVGKPEE  217 (258)
T ss_pred             ecCCccchHHhhhhhccccCChhhhHHHHHhhhhcC--CcCCCcCHHH
Confidence            999999998755321    122222    2222233  7899988875

>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative

Probab=99.95  E-value=6.9e-27  Score=172.77  Aligned_cols=172  Identities=16%  Similarity=0.148  Sum_probs=143.0

Q ss_pred             cccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|. .+.++...+++... .++.++.+|+++.+++.+++++  ..++++|++|||+|....  ..+.+.
T Consensus        18 l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~li~~ag~~~~--~~~~~~   95 (239)
T TIGR01831        18 LAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGVVLNAGITRD--AAFPAL   95 (239)
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CchhhC
Confidence            67899999998864 45555555555332 4789999999999999999988  667899999999998766  667778


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  .++||++||..+..+.+++..|+++|+++++++++++.++.++||+++
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  175 (239)
T TIGR01831        96 SEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGNRGQVNYSAAKAGLIGATKALAVELAKRKITVN  175 (239)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHHhHhCeEEE
Confidence            88999999999876                  368999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.....    +..+...+..  |++|+++|+|
T Consensus       176 ~v~Pg~v~t~~~~~~~----~~~~~~~~~~--~~~~~~~~~~  211 (239)
T TIGR01831       176 CIAPGLIDTEMLAEVE----HDLDEALKTV--PMNRMGQPAE  211 (239)
T ss_pred             EEEEccCccccchhhh----HHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999876542    2334444555  8899998875

This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.

>PRK12743 oxidoreductase; Provisional

Probab=99.95  E-value=7.9e-27  Score=174.27  Aligned_cols=174  Identities=20%  Similarity=0.191  Sum_probs=142.0

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++++ +.+.++...+++... .++.++.+|+++.+++++++++  .+++++|+||||+|....  ..+.+
T Consensus        21 ~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~   98 (256)
T PRK12743         21 LLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGRIDVLVNNAGAMTK--APFLD   98 (256)
T ss_pred             HHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhh
Confidence            36789999988865 556666655555433 4789999999999999999998  677899999999998765  66777


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                  .|+||++||..+..+.++...|+++|++++.++++++.++.++||++
T Consensus        99 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v  178 (256)
T PRK12743         99 MDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTPLPGASAYTAAKHALGGLTKAMALELVEHGILV  178 (256)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEE
Confidence            889999999999998                  26899999999888889999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+||.++|++....   .++.........  |++|+++|+|
T Consensus       179 ~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  216 (256)
T PRK12743        179 NAVAPGAIATPMNGMD---DSDVKPDSRPGI--PLGRPGDTHE  216 (256)
T ss_pred             EEEEeCCccCcccccc---ChHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999986542   222222333334  6788887764

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=99.95  E-value=6.9e-27  Score=174.45  Aligned_cols=175  Identities=19%  Similarity=0.218  Sum_probs=146.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.++...+++... .++.++.+|+++.+++.++++.  ..++++|++|||+|....  .++.+.+
T Consensus        31 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~  108 (256)
T PRK06124         31 LAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRLDILVNNVGARDR--RPLAELD  108 (256)
T ss_pred             HHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhCC
Confidence            6789999999999988877776665432 4688999999999999999998  667899999999998765  7778888


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++.+++|+.                 .+++|++||..+..+.++...|+++|++++.+++.++.++.++||++++|
T Consensus       109 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i  188 (256)
T PRK06124        109 DAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVARAGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAI  188 (256)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCCCCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEE
Confidence            9999999999988                 47899999999998899999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++...... .++..+.+....  |++++.+|+|
T Consensus       189 ~pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  225 (256)
T PRK06124        189 APGYFATETNAAMAA-DPAVGPWLAQRT--PLGRWGRPEE  225 (256)
T ss_pred             EECCccCcchhhhcc-ChHHHHHHHhcC--CCCCCCCHHH
Confidence            999999998654432 333334444444  6788877764

>PRK06139 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-26  Score=179.31  Aligned_cols=150  Identities=22%  Similarity=0.251  Sum_probs=134.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  ..++++|++|||||....  ..+.+.
T Consensus        26 ~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~  103 (330)
T PRK06139         26 AFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRIDVWVNNVGVGAV--GRFEET  103 (330)
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--CCcccC
Confidence            36789999999999999888877766443 4788899999999999999988  556899999999998766  778889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC-CeEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY-DIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~-~i~v~  139 (181)
                      +.++++..+++|+.                 .|+||+++|..+..+.|.+..|+++|+++.+|+++|+.|+.++ ||+|+
T Consensus       104 ~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~  183 (330)
T PRK06139        104 PIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQPYAAAYSASKFGLRGFSEALRGELADHPDIHVC  183 (330)
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence            99999999999998                 4799999999999999999999999999999999999999875 99999


Q ss_pred             EEecCcccCcccc
Q 042200          140 SIAHIVSATPFFC  152 (181)
Q Consensus       140 ~i~Pg~v~t~~~~  152 (181)
                      +|+||+++|++..
T Consensus       184 ~v~Pg~v~T~~~~  196 (330)
T PRK06139        184 DVYPAFMDTPGFR  196 (330)
T ss_pred             EEecCCccCcccc
Confidence            9999999999753

>PRK07856 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1e-26  Score=173.22  Aligned_cols=167  Identities=18%  Similarity=0.221  Sum_probs=140.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.     ....  .++.++.+|+++.+++.++++.  ..++++|+||||||....  ..+.+.+.
T Consensus        26 l~~~g~~v~~~~r~~~~-----~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~   96 (252)
T PRK07856         26 FLAAGATVVVCGRRAPE-----TVDG--RPAEFHAADVRDPDQVAALVDAIVERHGRLDVLVNNAGGSPY--ALAAEASP   96 (252)
T ss_pred             HHHCCCEEEEEeCChhh-----hhcC--CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCH
Confidence            67899999999998754     1111  3688899999999999999988  667899999999998755  66777888


Q ss_pred             HHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      ++|+..+++|+.                  .|+||++||..+..+.+.+..|+++|+++++|+++++.++.++ |++|+|
T Consensus        97 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~-i~v~~i  175 (252)
T PRK07856         97 RFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPSPGTAAYGAAKAGLLNLTRSLAVEWAPK-VRVNAV  175 (252)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCC-eEEEEE
Confidence            999999999998                  2689999999999999999999999999999999999999987 999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++...... +++..+.+....  |++|+++|+|
T Consensus       176 ~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~p~~  212 (252)
T PRK07856        176 VVGLVRTEQSELHYG-DAEGIAAVAATV--PLGRLATPAD  212 (252)
T ss_pred             EeccccChHHhhhcc-CHHHHHHHhhcC--CCCCCcCHHH
Confidence            999999998655433 344445555555  7899998875

>PRK05876 short chain dehydrogenase; Provisional

Probab=99.95  E-value=1.1e-26  Score=175.29  Aligned_cols=151  Identities=25%  Similarity=0.400  Sum_probs=135.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++.+++++  .+++++|+||||||....  +.+.+.
T Consensus        25 ~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~--~~~~~~  102 (275)
T PRK05876         25 EFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVDVVFSNAGIVVG--GPIVEM  102 (275)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccC
Confidence            36789999999999998888877776543 4688899999999999999998  677899999999998766  778889


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  +|+||++||.++..+.++...|+++|+++.+|+++|+.+++++||+++
T Consensus       103 ~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~  182 (275)
T PRK05876        103 THDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVPNAGLGAYGVAKYGVVGLAETLAREVTADGIGVS  182 (275)
T ss_pred             CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            99999999999998                  368999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccch
Q 042200          140 SIAHIVSATPFFCN  153 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~  153 (181)
                      +|+||+++|++..+
T Consensus       183 ~v~Pg~v~t~~~~~  196 (275)
T PRK05876        183 VLCPMVVETNLVAN  196 (275)
T ss_pred             EEEeCccccccccc
Confidence            99999999997644

>TIGR02415 23BDH acetoin reductases

Probab=99.95  E-value=1.6e-26  Score=172.19  Aligned_cols=176  Identities=24%  Similarity=0.302  Sum_probs=146.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++.++++.  .+++++|+||||+|....  .++.+.+
T Consensus        20 l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~   97 (254)
T TIGR02415        20 LAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVMVNNAGVAPI--TPILEIT   97 (254)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCC
Confidence            6789999999999988777766665432 4688999999999999999988  667899999999998765  6777889


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                  .+++|++||..+..+.+.+..|+.+|++++.|+++++.++.+.||+++.
T Consensus        98 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~  177 (254)
T TIGR02415        98 EEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGNPILSAYSSTKFAVRGLTQTAAQELAPKGITVNA  177 (254)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            9999999999985                  3789999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCC--------hHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGID--------KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||+++|+++.......        ....+.+.+..  |++++.+|+|
T Consensus       178 v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  224 (254)
T TIGR02415       178 YCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEI--ALGRPSEPED  224 (254)
T ss_pred             EecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhC--CCCCCCCHHH
Confidence            999999999875543211        12233444444  7788888764

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>PRK06484 short chain dehydrogenase; Validated

Probab=99.95  E-value=1.2e-26  Score=189.00  Aligned_cols=177  Identities=21%  Similarity=0.251  Sum_probs=145.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|+++.++++++++.  .+++++|+||||||.......++.+.+
T Consensus        24 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~  101 (520)
T PRK06484         24 RFARAGDQVVVADRNVERARERADSLGP--DHHALAMDVSDEAQIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTT  101 (520)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--ceeEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCC
Confidence            3788999999999999988888777754  678899999999999999998  678899999999998432114667788


Q ss_pred             HHHHHHhhheeec-----------------ce-eEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LG-VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~-~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                 .| +||++||..+..+.+.+..|+++|+++.+|+++++.|+.++||+|+.
T Consensus       102 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~  181 (520)
T PRK06484        102 LEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVALPKRTAYSASKAAVISLTRSLACEWAAKGIRVNA  181 (520)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCCCCCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            9999999999998                 24 99999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++...+.+......+......  |++++.+|+|
T Consensus       182 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  220 (520)
T PRK06484        182 VLPGYVRTQMVAELERAGKLDPSAVRSRI--PLGRLGRPEE  220 (520)
T ss_pred             EccCCcCchhhhhhcccchhhhHHHHhcC--CCCCCcCHHH
Confidence            99999999987655332222223333333  5666666653

>PRK05599 hypothetical protein; Provisional

Probab=99.95  E-value=9.9e-27  Score=172.92  Aligned_cols=149  Identities=11%  Similarity=0.136  Sum_probs=127.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+ +|++|++++|+.+++++..+++...  ..+.++.||++|.+++++++++  ..++++|++|||||....  ....+.
T Consensus        20 l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nag~~~~--~~~~~~   96 (246)
T PRK05599         20 LC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISLAVVAFGILGD--QERAET   96 (246)
T ss_pred             Hh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCEEEEecCcCCC--chhhhc
Confidence            45 5999999999999998887777543  2478899999999999999998  667899999999998755  444455


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.+.+.+.+++|+.                  +|+||++||.++..+.+.+..|+++|+++.+|+++|+.+++++||+||
T Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~  176 (246)
T PRK05599         97 DEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRARRANYVYGSTKAGLDAFCQGLADSLHGSHVRLI  176 (246)
T ss_pred             CcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCCcCCcchhhHHHHHHHHHHHHHHHhcCCCceEE
Confidence            66667777766655                  379999999999998889999999999999999999999999999999


Q ss_pred             EEecCcccCcccch
Q 042200          140 SIAHIVSATPFFCN  153 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~  153 (181)
                      +|+||+++|++...
T Consensus       177 ~v~PG~v~T~~~~~  190 (246)
T PRK05599        177 IARPGFVIGSMTTG  190 (246)
T ss_pred             EecCCcccchhhcC
Confidence            99999999998654

>PRK08226 short chain dehydrogenase; Provisional

Probab=99.95  E-value=2.1e-26  Score=172.53  Aligned_cols=175  Identities=23%  Similarity=0.302  Sum_probs=140.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+ ..+..+++... .++.++.+|+++.+++.+++++  .+++++|+||||||....  .++.+.+
T Consensus        26 l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~  102 (263)
T PRK08226         26 FARHGANLILLDISPE-IEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDILVNNAGVCRL--GSFLDMS  102 (263)
T ss_pred             HHHCCCEEEEecCCHH-HHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCC
Confidence            6789999999999875 33333333221 3688999999999999999998  667899999999998765  6777888


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++++..+++|+.                 .++||++||..+. .+.+.+..|+.+|+++++++++++.++.++||+|++
T Consensus       103 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~  182 (263)
T PRK08226        103 DEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNA  182 (263)
T ss_pred             HHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            9999999999988                 3689999998773 566778899999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC-----ChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI-----DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++...+...     .++......+..  |++|+++|+|
T Consensus       183 i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~  226 (263)
T PRK08226        183 ICPGYVRTPMAESIARQSNPEDPESVLTEMAKAI--PLRRLADPLE  226 (263)
T ss_pred             EecCcccCHHHHhhhhhccCCCcHHHHHHHhccC--CCCCCCCHHH
Confidence            99999999987654321     122333444444  7899988875

>PRK06841 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.3e-26  Score=171.48  Aligned_cols=172  Identities=23%  Similarity=0.271  Sum_probs=140.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+..+ ....+.. ..+.++.+|+++.+++.+++++  ..++++|+||||||....  .++.+.+.
T Consensus        35 l~~~G~~Vi~~~r~~~~~~-~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~  110 (255)
T PRK06841         35 FAAKGARVALLDRSEDVAE-VAAQLLG-GNAKGLVCDVSDSQSVEAAVAAVISAFGRIDILVNSAGVALL--APAEDVSE  110 (255)
T ss_pred             HHHCCCEEEEEeCCHHHHH-HHHHhhC-CceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCCH
Confidence            6789999999999876433 2333322 3577899999999999999988  667889999999998765  67777888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .++||++||..+..+.+....|+++|++++.++++++.+++++||++++|+
T Consensus       111 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  190 (255)
T PRK06841        111 EDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVALERHVAYCASKAGVVGMTKVLALEWGPYGITVNAIS  190 (255)
T ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEE
Confidence            999999999988                 468999999999899999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+++|++....+.  .+..+.+....  |++|+.+|+|
T Consensus       191 pg~v~t~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~  225 (255)
T PRK06841        191 PTVVLTELGKKAWA--GEKGERAKKLI--PAGRFAYPEE  225 (255)
T ss_pred             eCcCcCcccccccc--hhHHHHHHhcC--CCCCCcCHHH
Confidence            99999998665432  22333444444  7788888764

>PRK08862 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.4e-26  Score=168.88  Aligned_cols=146  Identities=15%  Similarity=0.159  Sum_probs=125.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccC-CccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFG-KLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~-~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+++++..+++... ..+..+.+|+++.++++++++.  .+++ ++|++|||||..... ..+.+
T Consensus        24 ~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~iD~li~nag~~~~~-~~~~~  102 (227)
T PRK08862         24 HFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRAPDVLVNNWTSSPLP-SLFDE  102 (227)
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCCCCEEEECCccCCCC-Ccccc
Confidence            37889999999999999888887766443 4678899999999999999998  6778 899999999864331 56778


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|.+.+++|+.                  +|.||++||..+   .+++..|+++|+++.+|+++|+.|++++||+|
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~---~~~~~~Y~asKaal~~~~~~la~el~~~~Irv  179 (227)
T PRK08862        103 QPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDD---HQDLTGVESSNALVSGFTHSWAKELTPFNIRV  179 (227)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCC---CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            888999988888766                  379999998654   35678899999999999999999999999999


Q ss_pred             EEEecCcccCcc
Q 042200          139 NSIAHIVSATPF  150 (181)
Q Consensus       139 ~~i~Pg~v~t~~  150 (181)
                      |+|+||++.|+.
T Consensus       180 n~v~PG~i~t~~  191 (227)
T PRK08862        180 GGVVPSIFSANG  191 (227)
T ss_pred             EEEecCcCcCCC
Confidence            999999999983

>PRK07890 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.3e-26  Score=171.69  Aligned_cols=177  Identities=21%  Similarity=0.216  Sum_probs=144.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++...++... .++.++.+|+++.+++.+++++  .+++++|+||||||..... .++.+.+
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~d~vi~~ag~~~~~-~~~~~~~  103 (258)
T PRK07890         25 AARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRVDALVNNAFRVPSM-KPLADAD  103 (258)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCccEEEECCccCCCC-CCcccCC
Confidence            6789999999999988877776666432 4688999999999999999988  6778999999999975432 5666788


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|+..+++|+.                .++||++||..+..+.+++..|+++|++++.++++++.+++++||++++|+
T Consensus       104 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~  183 (258)
T PRK07890        104 FAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHSQPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVA  183 (258)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEe
Confidence            8999999999998                358999999999888899999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCC--------ChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGI--------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++...+...        .++..+.+.+..  |++++.+|+|
T Consensus       184 pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  228 (258)
T PRK07890        184 PGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANS--DLKRLPTDDE  228 (258)
T ss_pred             CCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcC--CccccCCHHH
Confidence            999999976543211        123333444444  6777777764

>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=9.1e-27  Score=177.05  Aligned_cols=135  Identities=17%  Similarity=0.101  Sum_probs=109.4

Q ss_pred             HHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEecccccccc
Q 042200           44 DVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETI  106 (181)
Q Consensus        44 ~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~  106 (181)
                      ++++++++  .++|++|++|||||.......++.+++.++|+..+++|+.               .|+||+++|..+..+
T Consensus       105 si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~  184 (299)
T PRK06300        105 TISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRA  184 (299)
T ss_pred             HHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCc
Confidence            57888888  7789999999999975321167888999999999999999               588999999999888


Q ss_pred             Cccch-hhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          107 GEALY-DYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       107 ~~~~~-~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .+... .|+++|+++.+|+++|+.|+++ +|||||+|+||.++|++...... .++..+......  |++|+++|+|
T Consensus       185 ~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~pee  258 (299)
T PRK06300        185 VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGF-IERMVDYYQDWA--PLPEPMEAEQ  258 (299)
T ss_pred             CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccc-cHHHHHHHHhcC--CCCCCcCHHH
Confidence            88765 8999999999999999999987 59999999999999998654321 223333333444  7888888875

>PRK05855 short chain dehydrogenase; Validated

Probab=99.94  E-value=3e-26  Score=188.50  Aligned_cols=151  Identities=25%  Similarity=0.269  Sum_probs=135.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+.+... .++.++.||++|.+++.+++++  .+++++|+||||||....  ..+.+.
T Consensus       334 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~  411 (582)
T PRK05855        334 AFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVPDIVVNNAGIGMA--GGFLDT  411 (582)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCCcEEEECCccCCC--CCcccC
Confidence            37789999999999998888777666433 4788999999999999999998  667899999999999766  778888


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++++.++++|+.                  .|+||++||.++..+.++...|++||+++++|+++|+.++.++||+|+
T Consensus       412 ~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~  491 (582)
T PRK05855        412 SAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPSRSLPAYATSKAAVLMLSECLRAELAAAGIGVT  491 (582)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            99999999999987                  268999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccch
Q 042200          140 SIAHIVSATPFFCN  153 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~  153 (181)
                      +|+||+++|++...
T Consensus       492 ~v~Pg~v~t~~~~~  505 (582)
T PRK05855        492 AICPGFVDTNIVAT  505 (582)
T ss_pred             EEEeCCCcccchhc
Confidence            99999999998665

>PRK06483 dihydromonapterin reductase; Provisional

Probab=99.94  E-value=4.9e-26  Score=168.03  Aligned_cols=166  Identities=14%  Similarity=0.087  Sum_probs=134.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+...+.....    .+.++.+|+++.+++.+++++  ..++++|++|||||....  ....+.+.
T Consensus        22 l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~   95 (236)
T PRK06483         22 LLAQGQPVIVSYRTHYPAIDGLRQA----GAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHNASDWLA--EKPGAPLA   95 (236)
T ss_pred             HHHCCCeEEEEeCCchhHHHHHHHc----CCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEECCccccC--CCcCccCH
Confidence            6789999999999876544333332    367889999999999999998  667889999999998654  44556788


Q ss_pred             HHHHHhhheeec----------------c---eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           80 EKVKRVMIMVVF----------------L---GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~---~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      ++|+..+++|+.                .   ++||++||..+..+.+.+..|+++|+++++|+++++.++++ +||||+
T Consensus        96 ~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~asKaal~~l~~~~a~e~~~-~irvn~  174 (236)
T PRK06483         96 DVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGSDKHIAYAASKAALDNMTLSFAAKLAP-EVKVNS  174 (236)
T ss_pred             HHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHCC-CcEEEE
Confidence            999999999998                2   58999999988888888999999999999999999999988 599999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|+..     .+++..+....+.  |++|+++|+|
T Consensus       175 v~Pg~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~  208 (236)
T PRK06483        175 IAPALILFNEG-----DDAAYRQKALAKS--LLKIEPGEEE  208 (236)
T ss_pred             EccCceecCCC-----CCHHHHHHHhccC--ccccCCCHHH
Confidence            99999977532     1233333444454  7888888875

>PLN02253 xanthoxin dehydrogenase

Probab=99.94  E-value=6.3e-26  Score=171.45  Aligned_cols=153  Identities=33%  Similarity=0.516  Sum_probs=132.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+..++..+++....++.++.+|++|.+++.++++.  .+++++|+||||||........+.+.+
T Consensus        37 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~  116 (280)
T PLN02253         37 LFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVE  116 (280)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCC
Confidence            367899999999999877777766664324688999999999999999998  677899999999998643114567788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||+++|..+..+.+....|+++|++++.++++++.+++++||+|+++
T Consensus       117 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i  196 (280)
T PLN02253        117 LSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIGGLGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCV  196 (280)
T ss_pred             HHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhcccCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            9999999999988                 47899999999988888888999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.+.|++...
T Consensus       197 ~pg~v~t~~~~~  208 (280)
T PLN02253        197 SPYAVPTALALA  208 (280)
T ss_pred             eeCccccccccc
Confidence            999999997543

>PRK06500 short chain dehydrogenase; Provisional

Probab=99.94  E-value=5.4e-26  Score=168.80  Aligned_cols=174  Identities=21%  Similarity=0.157  Sum_probs=142.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.+++..+++..  ++.++.+|+++.+++..+++.  ..++++|+||||||....  .++.+.+.
T Consensus        26 l~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~  101 (249)
T PRK06500         26 FLAEGARVAITGRDPASLEAARAELGE--SALVIRADAGDVAAQKALAQALAEAFGRLDAVFINAGVAKF--APLEDWDE  101 (249)
T ss_pred             HHHCCCEEEEecCCHHHHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCCH
Confidence            678999999999998887777776654  688899999999999999887  566889999999998765  66777889


Q ss_pred             HHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           80 EKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        80 ~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      ++|+..+++|+.               .+++|+++|..+..+.+....|+.+|++++.++++++.++.++||++++|+||
T Consensus       102 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg  181 (249)
T PRK06500        102 AMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAHIGMPNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPG  181 (249)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            999999999998               46899999988888888999999999999999999999999999999999999


Q ss_pred             cccCcccchhcCC---ChHHHHHHHHHhhcccccccccCC
Q 042200          145 VSATPFFCNAMGI---DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       145 ~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .++|++.......   .....+.+....  |++++++|+|
T Consensus       182 ~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  219 (249)
T PRK06500        182 PVQTPLYGKLGLPEATLDAVAAQIQALV--PLGRFGTPEE  219 (249)
T ss_pred             cCCCHHHHhhccCccchHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999986543111   112223333333  6777777754

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=99.94  E-value=4e-26  Score=170.68  Aligned_cols=175  Identities=18%  Similarity=0.212  Sum_probs=133.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.. ..+..+++... ..+.++.+|+++.+++.+++++  .+++++|+||||||..... .++.+.
T Consensus        27 ~l~~~G~~v~~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~-~~~~~~  104 (260)
T PRK12823         27 RAAAEGARVVLVDRSEL-VHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDVLINNVGGTIWA-KPFEEY  104 (260)
T ss_pred             HHHHCCCEEEEEeCchH-HHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeEEEECCccccCC-CChhhC
Confidence            36789999999999853 33444444322 3688899999999999999998  6678999999999964321 667788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+.  .+...+|+++|++++.|+++++.+++++||++++
T Consensus       105 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~--~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  182 (260)
T PRK12823        105 EEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATR--GINRVPYSAAKGGVNALTASLAFEYAEHGIRVNA  182 (260)
T ss_pred             ChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCcccc--CCCCCccHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            89999999999986                 4789999998654  2345689999999999999999999999999999


Q ss_pred             EecCcccCcccchh-----cCC-C----hHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNA-----MGI-D----KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~-----~~~-~----~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++....     +.. .    ++..+......  |++|+++|+|
T Consensus       183 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  231 (260)
T PRK12823        183 VAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSS--LMKRYGTIDE  231 (260)
T ss_pred             EecCccCCcchhhHHhhccccccccccHHHHHHHHhccC--CcccCCCHHH
Confidence            99999999863211     000 1    12233333444  8899998875

>PRK06949 short chain dehydrogenase; Provisional

Probab=99.94  E-value=7.8e-26  Score=168.83  Aligned_cols=174  Identities=23%  Similarity=0.238  Sum_probs=144.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+++++...++... .++.++.+|+++.+++.+++++  ..++++|++|||+|....  ..+.+.+
T Consensus        29 l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~--~~~~~~~  106 (258)
T PRK06949         29 LAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGTIDILVNNSGVSTT--QKLVDVT  106 (258)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCC
Confidence            6789999999999998887776665432 4688999999999999999988  667899999999998765  6667778


Q ss_pred             HHHHHHhhheeec-------------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           79 NEKVKRVMIMVVF-------------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        79 ~~~~~~~~~~n~~-------------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      .++|+.++++|+.                         .+++|+++|..+..+.+....|+++|++++.++++++.++++
T Consensus       107 ~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~  186 (258)
T PRK06949        107 PADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRVLPQIGLYCMSKAAVVHMTRAMALEWGR  186 (258)
T ss_pred             HHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCCCCCccHHHHHHHHHHHHHHHHHHHHHh
Confidence            8999999999877                         168999999988888888899999999999999999999999


Q ss_pred             CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++++|+||+++|++....+.  .+....+....  |++++++|+|
T Consensus       187 ~~i~v~~v~pG~v~t~~~~~~~~--~~~~~~~~~~~--~~~~~~~p~~  230 (258)
T PRK06949        187 HGINVNAICPGYIDTEINHHHWE--TEQGQKLVSML--PRKRVGKPED  230 (258)
T ss_pred             cCeEEEEEeeCCCcCCcchhccC--hHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999999998765442  22223344444  7788888875

>PRK07814 short chain dehydrogenase; Provisional

Probab=99.94  E-value=9.6e-26  Score=169.10  Aligned_cols=174  Identities=18%  Similarity=0.189  Sum_probs=142.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+.+... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+.+.+
T Consensus        30 l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~--~~~~~~~  107 (263)
T PRK07814         30 FAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRLDIVVNNVGGTMP--NPLLSTS  107 (263)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCC
Confidence            6789999999999988877776665432 4688999999999999999998  667899999999998655  6677888


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++++..+++|+.                  .+++|++||..+..+.+++..|+++|++++.++++++.++.+ +|++++
T Consensus       108 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~-~i~v~~  186 (263)
T PRK07814        108 TKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLAGRGFAAYGTAKAALAHYTRLAALDLCP-RIRVNA  186 (263)
T ss_pred             HHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHHCC-CceEEE
Confidence            9999999999988                  378999999999988899999999999999999999999987 699999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+.|++...... .++..+.+....  |+++..+|+|
T Consensus       187 i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  224 (263)
T PRK07814        187 IAPGSILTSALEVVAA-NDELRAPMEKAT--PLRRLGDPED  224 (263)
T ss_pred             EEeCCCcCchhhhccC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999997654321 333344444444  5667666653

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.94  E-value=5.9e-27  Score=159.70  Aligned_cols=175  Identities=25%  Similarity=0.315  Sum_probs=149.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC----CCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM----DRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~----~~~~   74 (181)
                      +|+++|++|++++--+.+..+..+++..  ++.+...|++++++++..+..  .+||++|.+|||||+....    -+.-
T Consensus        28 rlakqgasv~lldlp~skg~~vakelg~--~~vf~padvtsekdv~aala~ak~kfgrld~~vncagia~a~ktyn~~k~  105 (260)
T KOG1199|consen   28 RLAKQGASVALLDLPQSKGADVAKELGG--KVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKK  105 (260)
T ss_pred             HHHhcCceEEEEeCCcccchHHHHHhCC--ceEEeccccCcHHHHHHHHHHHHhhccceeeeeeccceeeeeeeeeeccc
Confidence            3789999999999988899999999987  899999999999999999988  8899999999999985431    0222


Q ss_pred             ccCCHHHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      ...+.++++.++++|+.                       +|.||++.|.+++-+..++..|++||+++.+++--+++++
T Consensus       106 ~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gqaaysaskgaivgmtlpiardl  185 (260)
T KOG1199|consen  106 KHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQAAYSASKGAIVGMTLPIARDL  185 (260)
T ss_pred             ccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccchhhhhcccCceEeeechhhhhc
Confidence            34678999999999998                       7899999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          132 GQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +..|||+++|.||.++||+....+    |.+..++.+..+--.|++.|.|
T Consensus       186 a~~gir~~tiapglf~tpllsslp----ekv~~fla~~ipfpsrlg~p~e  231 (260)
T KOG1199|consen  186 AGDGIRFNTIAPGLFDTPLLSSLP----EKVKSFLAQLIPFPSRLGHPHE  231 (260)
T ss_pred             ccCceEEEeecccccCChhhhhhh----HHHHHHHHHhCCCchhcCChHH
Confidence            999999999999999999987754    5666665553221267777754

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=99.94  E-value=6.5e-26  Score=169.49  Aligned_cols=176  Identities=16%  Similarity=0.226  Sum_probs=141.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+...+++..+++...   .++.++.+|+++.+++.+++++  .+++++|++|||||....  ..+.+
T Consensus        22 l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~vv~~ag~~~~--~~~~~   99 (259)
T PRK12384         22 LAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVDLLVYNAGIAKA--AFITD   99 (259)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCccc
Confidence            6789999999999987777665554321   3688999999999999999988  677899999999998766  77788


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                  .++||++||..+..+.+....|+++|+++++++++++.+++++||+|
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v  179 (259)
T PRK12384        100 FQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKVGSKHNSGYSAAKFGGVGLTQSLALDLAEYGITV  179 (259)
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence            899999999999986                  25899999988888888888999999999999999999999999999


Q ss_pred             EEEecCcc-cCcccchhcCC--------ChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVS-ATPFFCNAMGI--------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v-~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+||.+ .+++.....+.        .++..+.+....  |++|+.+|+|
T Consensus       180 ~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  229 (259)
T PRK12384        180 HSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKV--PLKRGCDYQD  229 (259)
T ss_pred             EEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhC--cccCCCCHHH
Confidence            99999975 66665433221        122233333444  7888888764

>PRK07069 short chain dehydrogenase; Validated

Probab=99.94  E-value=9.8e-26  Score=167.60  Aligned_cols=176  Identities=20%  Similarity=0.223  Sum_probs=141.8

Q ss_pred             cccCCCEEEEeecc-hHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQ-DDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+ .+.++...+.+...   ..+..+.+|+++.+++.+++++  ..++++|+||||||....  ..+.
T Consensus        19 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~   96 (251)
T PRK07069         19 MAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLSVLVNNAGVGSF--GAIE   96 (251)
T ss_pred             HHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCccEEEECCCcCCC--CChh
Confidence            67899999999998 66666665555332   2356689999999999999998  667899999999998766  6777


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC--e
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD--I  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~--i  136 (181)
                      +.+.++++..+++|+.                 .++||++||..+..+.+.+..|+++|++++.|+++++.++.+++  |
T Consensus        97 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i  176 (251)
T PRK07069         97 QIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAEPDYTAYNASKAAVASLTKSIALDCARRGLDV  176 (251)
T ss_pred             hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCcE
Confidence            8889999999999986                 47899999999998889999999999999999999999998654  9


Q ss_pred             EEEEEecCcccCcccchhcCC--ChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGI--DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++.|+||+++|++.......  .++......+..  |++++++|+|
T Consensus       177 ~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  221 (251)
T PRK07069        177 RCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGV--PLGRLGEPDD  221 (251)
T ss_pred             EEEEEeecccCCcchhHHhhhccchhHHHHHhccC--CCCCCcCHHH
Confidence            999999999999987654221  223333344444  6677777764

>PRK05717 oxidoreductase; Validated

Probab=99.94  E-value=1.4e-25  Score=167.41  Aligned_cols=173  Identities=20%  Similarity=0.199  Sum_probs=138.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++..+..+++..  ++.++.+|+++.+++.+++++  .+++++|+||||||........+.+.+.
T Consensus        30 l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~  107 (255)
T PRK05717         30 LIAEGWQVVLADLDRERGSKVAKALGE--NAWFIAMDVADEAQVAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSL  107 (255)
T ss_pred             HHHcCCEEEEEcCCHHHHHHHHHHcCC--ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCH
Confidence            678999999999988777766665544  688999999999999999888  6678999999999986432245667888


Q ss_pred             HHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           80 EKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++|+..+++|+.                .++||++||..+..+.+.+..|+++|++++.++++++.++.+ +|+|++|+|
T Consensus       108 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~-~i~v~~i~P  186 (255)
T PRK05717        108 AHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQSEPDTEAYAASKGGLLALTHALAISLGP-EIRVNAVSP  186 (255)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcC-CCEEEEEec
Confidence            999999999998                478999999999888888999999999999999999999987 499999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |.+.|++.....  .....+......  |++|+++|+|
T Consensus       187 g~i~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~  220 (255)
T PRK05717        187 GWIDARDPSQRR--AEPLSEADHAQH--PAGRVGTVED  220 (255)
T ss_pred             ccCcCCcccccc--chHHHHHHhhcC--CCCCCcCHHH
Confidence            999998743321  111111112233  6678777754

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=99.94  E-value=1.1e-25  Score=167.07  Aligned_cols=174  Identities=14%  Similarity=0.107  Sum_probs=140.7

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++. +++.+..++..+++... .++..+.+|++|.+++.+++++  ..++++|+||||||....  ..+.+
T Consensus        22 ~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~   99 (246)
T PRK12938         22 RLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEIDVLVNNAGITRD--VVFRK   99 (246)
T ss_pred             HHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhh
Confidence            367899998875 44555555555554332 4688889999999999999988  667899999999998765  67778


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|++.+++|+.                 .++||++||..+..+.+++..|+++|++++.++++++.++.++||+++
T Consensus       100 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~  179 (246)
T PRK12938        100 MTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVN  179 (246)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCCCCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEE
Confidence            899999999999988                 378999999988888889999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++....   .++..+......  |++++++|+|
T Consensus       180 ~i~pg~~~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~  216 (246)
T PRK12938        180 TVSPGYIGTDMVKAI---RPDVLEKIVATI--PVRRLGSPDE  216 (246)
T ss_pred             EEEecccCCchhhhc---ChHHHHHHHhcC--CccCCcCHHH
Confidence            999999999986543   234444444444  6677777653

>PRK06701 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.4e-25  Score=170.50  Aligned_cols=176  Identities=18%  Similarity=0.228  Sum_probs=141.8

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+ ..+.....+... .++.++.+|+++.+++.+++++  ..++++|+||||||..... ..+.+
T Consensus        65 ~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~-~~~~~  143 (290)
T PRK06701         65 LFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGRLDILVNNAAFQYPQ-QSLED  143 (290)
T ss_pred             HHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCC-CCccc
Confidence            36789999999999753 344444444322 4688999999999999999988  6678899999999975432 56777


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|...+++|+.               .++||++||..+..+.+.+..|+++|++++.|+++++.++.++||++++|
T Consensus       144 ~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i  223 (290)
T PRK06701        144 ITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGNETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAV  223 (290)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            889999999999988               47899999999988888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.++|++.....  .++..+.+....  |++++.+|+|
T Consensus       224 ~pG~v~T~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  259 (290)
T PRK06701        224 APGPIWTPLIPSDF--DEEKVSQFGSNT--PMQRPGQPEE  259 (290)
T ss_pred             ecCCCCCccccccc--CHHHHHHHHhcC--CcCCCcCHHH
Confidence            99999999765432  334444444444  6788877754

>PRK07576 short chain dehydrogenase; Provisional

Probab=99.94  E-value=1.1e-25  Score=168.82  Aligned_cols=175  Identities=17%  Similarity=0.081  Sum_probs=139.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++.+++++  ..++++|++|||||....  ..+.+.+
T Consensus        29 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~iD~vi~~ag~~~~--~~~~~~~  106 (264)
T PRK07576         29 FARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPIDVLVSGAAGNFP--APAAGMS  106 (264)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CccccCC
Confidence            6789999999999988776665554332 3578899999999999999998  667899999999997655  6677788


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|+..+++|+.                .|+|+++||.++..+.+.+..|+++|++++.|+++++.++.++||+++.|+
T Consensus       107 ~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~  186 (264)
T PRK07576        107 ANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVPMPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIV  186 (264)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence            9999999999998                369999999988888889999999999999999999999999999999999


Q ss_pred             cCccc-CcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSA-TPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~-t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||.++ |+......+ .+.....+....  |++|..+|+|
T Consensus       187 pg~~~~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  223 (264)
T PRK07576        187 PGPIAGTEGMARLAP-SPELQAAVAQSV--PLKRNGTKQD  223 (264)
T ss_pred             cccccCcHHHhhccc-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            99997 554333222 222222233333  6777777654

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=99.94  E-value=1.1e-25  Score=167.33  Aligned_cols=174  Identities=18%  Similarity=0.175  Sum_probs=139.8

Q ss_pred             cccCCCEEEE-eecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVII-ADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++ .+|+.+..++..+++... .++.++.+|+++++++.+++++  ..++++|+||||||....  .++.+.
T Consensus        24 l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  101 (250)
T PRK08063         24 LAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRLDVFVNNAASGVL--RPAMEL  101 (250)
T ss_pred             HHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            6789999776 578877777666655432 4788999999999999999998  667899999999998765  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.++.++||++++
T Consensus       102 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~  181 (250)
T PRK08063        102 EESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRYLENYTTVGVSKAALEALTRYLAVELAPKGIAVNA  181 (250)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEe
Confidence            89999999999987                 4699999998888888888999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      |+||++.|++...+.. ..+..+......  |.+++.+|+
T Consensus       182 i~pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~  218 (250)
T PRK08063        182 VSGGAVDTDALKHFPN-REELLEDARAKT--PAGRMVEPE  218 (250)
T ss_pred             EecCcccCchhhhccC-chHHHHHHhcCC--CCCCCcCHH
Confidence            9999999998655432 233333333333  445555554

>PRK06182 short chain dehydrogenase; Validated

Probab=99.94  E-value=1.5e-25  Score=168.87  Aligned_cols=144  Identities=20%  Similarity=0.203  Sum_probs=127.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++...   .  .+.++.+|++|.+++..++++  ..++++|+||||||....  +++.+.+.
T Consensus        23 l~~~G~~V~~~~r~~~~l~~~~~---~--~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~   95 (273)
T PRK06182         23 LAAQGYTVYGAARRVDKMEDLAS---L--GVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNNAGYGSY--GAIEDVPI   95 (273)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHh---C--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--CchhhCCH
Confidence            67899999999999887765432   1  477899999999999999998  667899999999998766  77888899


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++++..+++|+.                 .|+||++||..+..+.+....|+++|+++++|+++++.++.++||++++|+
T Consensus        96 ~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~  175 (273)
T PRK06182         96 DEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYTPLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIE  175 (273)
T ss_pred             HHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCCCCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEe
Confidence            999999999986                 478999999988888888889999999999999999999999999999999


Q ss_pred             cCcccCcccc
Q 042200          143 HIVSATPFFC  152 (181)
Q Consensus       143 Pg~v~t~~~~  152 (181)
                      ||+++|++..
T Consensus       176 Pg~v~t~~~~  185 (273)
T PRK06182        176 PGGIKTEWGD  185 (273)
T ss_pred             cCCcccccch
Confidence            9999999753

>PRK07041 short chain dehydrogenase; Provisional

Probab=99.94  E-value=2.6e-25  Score=163.46  Aligned_cols=173  Identities=18%  Similarity=0.169  Sum_probs=140.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.+.++.....+....++.++.+|+++.+++.++++.  .+++|++|||+|....  .++.+.+.+
T Consensus        16 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~~id~li~~ag~~~~--~~~~~~~~~   91 (230)
T PRK07041         16 AFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAE--AGPFDHVVITAADTPG--GPVRALPLA   91 (230)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHh--cCCCCEEEECCCCCCC--CChhhCCHH
Confidence            367899999999999887777666553224688999999999999999884  5789999999998766  667778889


Q ss_pred             HHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Q 042200           81 KVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSA  147 (181)
Q Consensus        81 ~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~  147 (181)
                      +++.++++|+.             .++||++||.++..+.++...|+++|+++++++++++.++.+  |++++++||.++
T Consensus        92 ~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~--irv~~i~pg~~~  169 (230)
T PRK07041         92 AAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRPSASGVLQGAINAALEALARGLALELAP--VRVNTVSPGLVD  169 (230)
T ss_pred             HHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCCCCcchHHHHHHHHHHHHHHHHHHHhhC--ceEEEEeecccc
Confidence            99999999887             579999999999988899999999999999999999999985  999999999999


Q ss_pred             CcccchhcCCC-hHHHHHHHHHhhcccccccccCC
Q 042200          148 TPFFCNAMGID-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       148 t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |++.....+.. ....+......  |+++.++|+|
T Consensus       170 t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  202 (230)
T PRK07041        170 TPLWSKLAGDAREAMFAAAAERL--PARRVGQPED  202 (230)
T ss_pred             cHHHHhhhccchHHHHHHHHhcC--CCCCCcCHHH
Confidence            99865543322 22233333344  6677777764

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=3e-25  Score=165.18  Aligned_cols=174  Identities=24%  Similarity=0.262  Sum_probs=137.6

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCC-ccEEEEcccccCC----CCCC
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGK-LDIMFNNAGIISN----MDRT   73 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~-id~vi~~ag~~~~----~~~~   73 (181)
                      |+++|++|+++++ ..+..+....++..  ++.++.+|+++.+++.+++++  ..+++ +|++|||||....    ....
T Consensus        25 l~~~G~~vv~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~  102 (253)
T PRK08642         25 FAREGARVVVNYHQSEDAAEALADELGD--RAIALQADVTDREQVQAMFATATEHFGKPITTVVNNALADFSFDGDARKK  102 (253)
T ss_pred             HHHCCCeEEEEcCCCHHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCC
Confidence            6789999988765 45555555555543  688999999999999999988  55676 9999999986421    1135


Q ss_pred             cccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           74 TLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.+.++|++.+++|+.                 .++||+++|.....+..++..|+++|++++.|++++++++.++||
T Consensus       103 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i  182 (253)
T PRK08642        103 ADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLFQNPVVPYHDYTTAKAALLGLTRNLAAELGPYGI  182 (253)
T ss_pred             cccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCccchHHHHHHHHHHHHHHHHHhCccCe
Confidence            667888999999999998                 478999999877777777889999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+|+||+++|+......  .++..+.+.+..  |++++.+|+|
T Consensus       183 ~v~~i~pG~v~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~  223 (253)
T PRK08642        183 TVNMVSGGLLRTTDASAAT--PDEVFDLIAATT--PLRKVTTPQE  223 (253)
T ss_pred             EEEEEeecccCCchhhccC--CHHHHHHHHhcC--CcCCCCCHHH
Confidence            9999999999998544321  233344444444  7899988875

>PRK06057 short chain dehydrogenase; Provisional

Probab=99.93  E-value=2.4e-25  Score=166.14  Aligned_cols=174  Identities=25%  Similarity=0.337  Sum_probs=139.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+...++...+++.    ..++.+|+++.+++.+++++  ..++++|+||||||...+.+..+.+.+.
T Consensus        27 l~~~G~~v~~~~r~~~~~~~~~~~~~----~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~  102 (255)
T PRK06057         27 LAAEGATVVVGDIDPEAGKAAADEVG----GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGL  102 (255)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHcC----CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCH
Confidence            67899999999999887777666553    25789999999999999998  5668899999999986432245667788


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccC-ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~-~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.|+..+++|+.                 .++||++||..+..+. +++..|+++|++++.+++.++.++.++||+++.|
T Consensus       103 ~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~g~~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i  182 (255)
T PRK06057        103 DAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQFARQGIRVNAL  182 (255)
T ss_pred             HHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhccCCCCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEE
Confidence            999999999987                 4789999998777665 3678899999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.++|++....+...++.........  |++++.+|+|
T Consensus       183 ~pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  220 (255)
T PRK06057        183 CPGPVNTPLLQELFAKDPERAARRLVHV--PMGRFAEPEE  220 (255)
T ss_pred             eeCCcCCchhhhhccCCHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999987665443444443444444  6677777764

>PRK06523 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1e-25  Score=168.55  Aligned_cols=144  Identities=17%  Similarity=0.180  Sum_probs=123.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+..      ..  .++.++.+|+++.+++.+++++  ..++++|+||||||........+.+.+.
T Consensus        29 l~~~G~~v~~~~r~~~~~------~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~  100 (260)
T PRK06523         29 LLEAGARVVTTARSRPDD------LP--EGVEFVAADLTTAEGCAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTD  100 (260)
T ss_pred             HHHCCCEEEEEeCChhhh------cC--CceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCH
Confidence            678999999999986532      12  2688899999999999999988  6678999999999975421155667888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCc-cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGE-ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~-~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      ++|+..+++|+.                 .++||++||..+..+.+ +...|+++|++++.|+++++.++.++||++|+|
T Consensus       101 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i  180 (260)
T PRK06523        101 EEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLPLPESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTV  180 (260)
T ss_pred             HHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            999999999988                 36899999998887755 788999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.++|++...
T Consensus       181 ~Pg~v~t~~~~~  192 (260)
T PRK06523        181 SPGWIETEAAVA  192 (260)
T ss_pred             ecCcccCccHHH
Confidence            999999997644

>PRK08263 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-25  Score=167.27  Aligned_cols=147  Identities=18%  Similarity=0.217  Sum_probs=132.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.++...+.+..  .+.++++|+++.+++.++++.  ..++++|++|||||....  +.+.+.+.
T Consensus        23 l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~   98 (275)
T PRK08263         23 ALERGDRVVATARDTATLADLAEKYGD--RLLPLALDVTDRAAVFAAVETAVEHFGRLDIVVNNAGYGLF--GMIEEVTE   98 (275)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHhccC--CeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCccc--cccccCCH
Confidence            678999999999998888776665544  688899999999999999988  567889999999998766  77888899


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|++.+++|+.                 .++||++||..+..+.+.+..|+++|++++.+++.++.++.++||+++.++
T Consensus        99 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~  178 (275)
T PRK08263         99 SEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAFPMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVE  178 (275)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEe
Confidence            999999999998                 468999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccc
Q 042200          143 HIVSATPFFC  152 (181)
Q Consensus       143 Pg~v~t~~~~  152 (181)
                      ||.+.|++..
T Consensus       179 Pg~~~t~~~~  188 (275)
T PRK08263        179 PGGYSTDWAG  188 (275)
T ss_pred             cCCccCCccc
Confidence            9999999874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=99.93  E-value=3.2e-25  Score=165.75  Aligned_cols=173  Identities=23%  Similarity=0.265  Sum_probs=140.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++++...+.+... .++.++.||++|.+++++++++  ..++++|+||||||....  ....+.+
T Consensus        32 l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~  109 (259)
T PRK08213         32 LGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHVDILVNNAGATWG--APAEDHP  109 (259)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCC
Confidence            6789999999999988877776665433 4688899999999999999988  556889999999998655  6667788


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCcc----chhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEA----LYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~----~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      .+.|+..++.|+.                  .+++|++||..+..+.++    ...|+++|++++.++++++.++.++||
T Consensus       110 ~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~~~~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi  189 (259)
T PRK08213        110 VEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGNPPEVMDTIAYNTSKGAVINFTRALAAEWGPHGI  189 (259)
T ss_pred             HHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCccccCcchHHHHHHHHHHHHHHHHHHhcccCE
Confidence            8999999999887                  268999999877765543    488999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++++++||++.|++.....   +...+.+....  |.+++++|+|
T Consensus       190 ~v~~v~Pg~~~t~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~  229 (259)
T PRK08213        190 RVNAIAPGFFPTKMTRGTL---ERLGEDLLAHT--PLGRLGDDED  229 (259)
T ss_pred             EEEEEecCcCCCcchhhhh---HHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999999865543   23344444444  6678877764

>PRK08628 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.8e-25  Score=166.94  Aligned_cols=149  Identities=20%  Similarity=0.235  Sum_probs=126.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.. +..+++... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+...
T Consensus        26 ~l~~~G~~v~~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  102 (258)
T PRK08628         26 RLAEEGAIPVIFGRSAPDD-EFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRIDGLVNNAGVNDG--VGLEAG  102 (258)
T ss_pred             HHHHcCCcEEEEcCChhhH-HHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCcccCC--CcccCC
Confidence            3678999999999987766 444554332 4788999999999999999998  667899999999997544  344434


Q ss_pred             CHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      . ++|+..+++|+.                .++|+++||..+..+.+++..|+++|++++.++++++.++.++||+++.|
T Consensus       103 ~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v  181 (258)
T PRK08628        103 R-EAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTGQGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAV  181 (258)
T ss_pred             H-HHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            4 889999999986                46899999999998888999999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.++|++..+
T Consensus       182 ~pg~v~t~~~~~  193 (258)
T PRK08628        182 IPAEVMTPLYEN  193 (258)
T ss_pred             ecCccCCHHHHH
Confidence            999999998654

>PRK05650 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.5e-25  Score=166.00  Aligned_cols=153  Identities=22%  Similarity=0.251  Sum_probs=135.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++..+++.  ..++++|+||||||....  ..+.+.
T Consensus        19 ~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~lI~~ag~~~~--~~~~~~   96 (270)
T PRK05650         19 RWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVIVNNAGVASG--GFFEEL   96 (270)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            36789999999999988888777666443 4788999999999999999988  566889999999998766  677888


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.+....|+++|+++++++++|+.++.+.||++++
T Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~  176 (270)
T PRK05650         97 SLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQGPAMSSYNVAKAGVVALSETLLVELADDEIGVHV  176 (270)
T ss_pred             CHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            89999999999976                 4799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhc
Q 042200          141 IAHIVSATPFFCNAM  155 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~  155 (181)
                      |+||+++|++.....
T Consensus       177 v~Pg~v~t~~~~~~~  191 (270)
T PRK05650        177 VCPSFFQTNLLDSFR  191 (270)
T ss_pred             EecCccccCcccccc
Confidence            999999999876543

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=4e-25  Score=164.27  Aligned_cols=177  Identities=28%  Similarity=0.335  Sum_probs=144.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++.+.....+....++.++.+|+++.+++.+++++  .+++++|+||||+|..... .++.+.+.
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~  103 (251)
T PRK07231         25 FAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVDILVNNAGTTHRN-GPLLDVDE  103 (251)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CChhhCCH
Confidence            67899999999999888777666654223688999999999999999988  6678999999999985442 45677888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .++||++||..+..+.++...|+.+|++++.+++.++.+++++||++++++
T Consensus       104 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~  183 (251)
T PRK07231        104 AEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRPRPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVA  183 (251)
T ss_pred             HHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEE
Confidence            999999999986                 468999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCC-ChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGI-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++....... .++..+.+....  |++++.+|+|
T Consensus       184 pg~~~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  221 (251)
T PRK07231        184 PVVVETGLLEAFMGEPTPENRAKFLATI--PLGRLGTPED  221 (251)
T ss_pred             ECccCCCcchhhhcccChHHHHHHhcCC--CCCCCcCHHH
Confidence            999999987665432 123333344443  6677777654

>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional

Probab=99.93  E-value=9.9e-26  Score=169.16  Aligned_cols=170  Identities=21%  Similarity=0.206  Sum_probs=134.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC-------CC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM-------DR   72 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~-------~~   72 (181)
                      |+++|++|++++|+......        ..+.++.+|+++.++++++++.  ..++++|+||||||.....       +.
T Consensus        29 l~~~G~~v~~~~~~~~~~~~--------~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~  100 (266)
T PRK06171         29 LLANGANVVNADIHGGDGQH--------ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPA  100 (266)
T ss_pred             HHHCCCEEEEEeCCcccccc--------CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCcccccccccc
Confidence            67899999999987654321        2577899999999999999998  6778999999999975431       01


Q ss_pred             CcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           73 TTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .+.+.+.++|+..+++|+.                 .++||++||..+..+.+++..|+++|+++++|+++++.+++++|
T Consensus       101 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~g  180 (266)
T PRK06171        101 GKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAGLEGSEGQSCYAATKAALNSFTRSWAKELGKHN  180 (266)
T ss_pred             ccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcC
Confidence            2345788999999999988                 36899999999988888999999999999999999999999999


Q ss_pred             eEEEEEecCccc-CcccchhcC--------CC-hHHHHHHHH--HhhcccccccccCC
Q 042200          136 IRVNSIAHIVSA-TPFFCNAMG--------ID-KKTFKELLY--ASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~-t~~~~~~~~--------~~-~~~~~~~~~--~~~~~~~~~~~~~e  181 (181)
                      |++|+|+||.++ |++.....+        .. .+..+.+..  ..  |++|+++|+|
T Consensus       181 i~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~e  236 (266)
T PRK06171        181 IRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTKTSTI--PLGRSGKLSE  236 (266)
T ss_pred             eEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcccccc--cCCCCCCHHH
Confidence            999999999997 665432211        01 122233332  34  8899999976

>PRK12937 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.6e-25  Score=163.99  Aligned_cols=174  Identities=24%  Similarity=0.234  Sum_probs=141.2

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++.|+. ...++..+++... .++.++.+|+++.+++.+++++  .+++++|+||||||....  ..+.+.
T Consensus        25 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  102 (245)
T PRK12937         25 LAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGRIDVLVNNAGVMPL--GTIADF  102 (245)
T ss_pred             HHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            678999998887753 3444444444322 4789999999999999999998  667899999999998765  677778


Q ss_pred             CHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           78 DNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        78 ~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +.++|+.++++|+.               .++||++||.++..+.+++..|+.+|++++.++++++.++.+.|++++.|+
T Consensus       103 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~  182 (245)
T PRK12937        103 DLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALPLPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVA  182 (245)
T ss_pred             CHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEE
Confidence            88999999999987               368999999988888899999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+++|++....  ..++..+.+.+..  |++++++|+|
T Consensus       183 pg~~~t~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~d  217 (245)
T PRK12937        183 PGPVATELFFNG--KSAEQIDQLAGLA--PLERLGTPEE  217 (245)
T ss_pred             eCCccCchhccc--CCHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999985332  1334455555555  7788877754

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=99.93  E-value=3.9e-25  Score=163.77  Aligned_cols=171  Identities=19%  Similarity=0.197  Sum_probs=140.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|+.|++.+|+.+++++....+..  ++.++.+|+++.+++++++++  ..++++|+||||||....  ..+.+.+.
T Consensus        26 l~~~g~~v~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~  101 (245)
T PRK12936         26 LHAQGAIVGLHGTRVEKLEALAAELGE--RVKIFPANLSDRDEVKALGQKAEADLEGVDILVNNAGITKD--GLFVRMSD  101 (245)
T ss_pred             HHHCCCEEEEEcCCHHHHHHHHHHhCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CccccCCH
Confidence            678999999999998888877666544  688899999999999999988  567899999999998765  66777888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .++||++||..+..+.+....|+.+|+++.++++.++.++.+.|+++++|+
T Consensus       102 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~  181 (245)
T PRK12936        102 EDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTGNPGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVA  181 (245)
T ss_pred             HHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcCCCCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEE
Confidence            899999999998                 467999999989988899999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+++|++.....   ++..+......  |++|+++|+|
T Consensus       182 pg~~~t~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~  215 (245)
T PRK12936        182 PGFIESAMTGKLN---DKQKEAIMGAI--PMKRMGTGAE  215 (245)
T ss_pred             ECcCcCchhcccC---hHHHHHHhcCC--CCCCCcCHHH
Confidence            9999998765432   22222222233  6677666643

>PRK06123 short chain dehydrogenase; Provisional

Probab=99.93  E-value=4.9e-25  Score=163.63  Aligned_cols=176  Identities=20%  Similarity=0.237  Sum_probs=137.3

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|+.|+++++ +.+..+.....+... .++.++.+|+++.+++.+++++  .+++++|+||||||..... ..+.+
T Consensus        21 ~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~   99 (248)
T PRK06123         21 LAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRLDALVNNAGILEAQ-MRLEQ   99 (248)
T ss_pred             HHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CChhh
Confidence            36789999888874 455555554444322 3678899999999999999998  6778999999999986542 45667


Q ss_pred             CCHHHHHHhhheeec--------------------ceeEEEeccccccccCcc-chhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           77 TDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .+.++|+..+++|+.                    .|+||++||.++..+.+. +..|+++|+++++|+++++.++.++|
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~~  179 (248)
T PRK06123        100 MDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSPGEYIDYAASKGAIDTMTIGLAKEVAAEG  179 (248)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCCCCccchHHHHHHHHHHHHHHHHHhcccC
Confidence            888999999999998                    146999999988887776 36799999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+++.|+||.+.|++.....  .++.........  |+++.++|+|
T Consensus       180 i~v~~i~pg~v~~~~~~~~~--~~~~~~~~~~~~--p~~~~~~~~d  221 (248)
T PRK06123        180 IRVNAVRPGVIYTEIHASGG--EPGRVDRVKAGI--PMGRGGTAEE  221 (248)
T ss_pred             eEEEEEecCcccCchhhccC--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999999754321  333444444444  7777777654

>PRK06180 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.5e-25  Score=165.42  Aligned_cols=149  Identities=17%  Similarity=0.166  Sum_probs=131.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.++++...+....  ++.++.+|+++.+++.++++.  ..++++|+||||||....  ..+.+.+
T Consensus        23 ~l~~~G~~V~~~~r~~~~~~~l~~~~~~--~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv~~ag~~~~--~~~~~~~   98 (277)
T PRK06180         23 AALAAGHRVVGTVRSEAARADFEALHPD--RALARLLDVTDFDAIDAVVADAEATFGPIDVLVNNAGYGHE--GAIEESP   98 (277)
T ss_pred             HHHhCcCEEEEEeCCHHHHHHHHhhcCC--CeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCC--cccccCC
Confidence            3678899999999998887766554333  688899999999999999998  667889999999998765  6777889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .++||++||.++..+.+++..|+++|++++.++++++.++.++|+++++|
T Consensus        99 ~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i  178 (277)
T PRK06180         99 LAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLITMPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAV  178 (277)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEE
Confidence            9999999999987                 46899999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.+.|++...
T Consensus       179 ~Pg~v~t~~~~~  190 (277)
T PRK06180        179 EPGSFRTDWAGR  190 (277)
T ss_pred             ecCCcccCcccc
Confidence            999999987543

>PLN00015 protochlorophyllide reductase

Probab=99.93  E-value=7.8e-25  Score=167.71  Aligned_cols=152  Identities=13%  Similarity=0.037  Sum_probs=125.3

Q ss_pred             CcccCC-CEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHR-AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++| ++|++++|+.+++++..+++... .++.++.+|+++.++++++++.  ..++++|+||||||+.... ..+.+
T Consensus        16 ~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lInnAG~~~~~-~~~~~   94 (308)
T PLN00015         16 ALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLVCNAAVYLPT-AKEPT   94 (308)
T ss_pred             HHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEEECCCcCCCC-CCcCC
Confidence            367899 99999999998888777776532 4688899999999999999998  5567899999999985431 34567


Q ss_pred             CCHHHHHHhhheeec----------------c---eeEEEecccccccc-------------------------------
Q 042200           77 TDNEKVKRVMIMVVF----------------L---GVLLFTANLATETI-------------------------------  106 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~---~~iv~iss~~~~~~-------------------------------  106 (181)
                      .+.++|+.++++|+.                .   |+||++||.++..+                               
T Consensus        95 ~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (308)
T PLN00015         95 FTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLAGGLNGLNSSAMI  174 (308)
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccCCCccchhhhhhhhcccCCccchhhc
Confidence            888999999999988                2   69999999876421                               


Q ss_pred             ----CccchhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcc-cCcccch
Q 042200          107 ----GEALYDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVS-ATPFFCN  153 (181)
Q Consensus       107 ----~~~~~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v-~t~~~~~  153 (181)
                          ..++..|+.||+|...+++.+++++.+ .||+|++|+||+| .|+|.+.
T Consensus       175 ~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  227 (308)
T PLN00015        175 DGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE  227 (308)
T ss_pred             cccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence                124567999999988889999999975 6999999999999 6888654

>PRK07024 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.9e-25  Score=163.57  Aligned_cols=150  Identities=23%  Similarity=0.195  Sum_probs=130.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc-ccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT-LDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~-~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++....++.++.+|+++.+++.+++++  .+++.+|++|||||....  ... .+.
T Consensus        21 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~lv~~ag~~~~--~~~~~~~   98 (257)
T PRK07024         21 EYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDVVIANAGISVG--TLTEERE   98 (257)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC--ccccccC
Confidence            367899999999999988887766664323688999999999999999988  667889999999998654  333 336


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++..+++|+.                 .++||++||.++..+.+....|+++|++++.|+++++.++.++||++++
T Consensus        99 ~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~  178 (257)
T PRK07024         99 DLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGLPGAGAYSASKAAAIKYLESLRVELRPAGVRVVT  178 (257)
T ss_pred             CHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence            77899999999998                 4789999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccc
Q 042200          141 IAHIVSATPFFC  152 (181)
Q Consensus       141 i~Pg~v~t~~~~  152 (181)
                      |+||++.|++..
T Consensus       179 v~Pg~v~t~~~~  190 (257)
T PRK07024        179 IAPGYIRTPMTA  190 (257)
T ss_pred             EecCCCcCchhh
Confidence            999999999754

>PRK12939 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.1e-25  Score=162.80  Aligned_cols=174  Identities=24%  Similarity=0.247  Sum_probs=143.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++++...+.+... .++.++.+|+++.+++.+++++  ..++++|+||||+|....  ..+.+.+
T Consensus        27 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~  104 (250)
T PRK12939         27 LAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLDGLVNNAGITNS--KSATELD  104 (250)
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCC
Confidence            6789999999999988887776665432 4689999999999999999988  566889999999998766  6677788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..++.|+.                 .|++|++||..+..+.+....|+++|++++.+++.++.++++++|+++.|
T Consensus       105 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v  184 (250)
T PRK12939        105 IDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGAPKLGAYVASKGAVIGMTRSLARELGGRGITVNAI  184 (250)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEE
Confidence            8999999998888                 45899999999888888889999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.+.|++......  ....+.+....  |..++.+|+|
T Consensus       185 ~pg~v~t~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~d  220 (250)
T PRK12939        185 APGLTATEATAYVPA--DERHAYYLKGR--ALERLQVPDD  220 (250)
T ss_pred             EECCCCCccccccCC--hHHHHHHHhcC--CCCCCCCHHH
Confidence            999999998755321  13333333333  5666666653

>PRK07832 short chain dehydrogenase; Provisional

Probab=99.93  E-value=7.1e-25  Score=165.13  Aligned_cols=151  Identities=18%  Similarity=0.161  Sum_probs=131.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+.+++..+++...  ..+.++.+|+++.+++.+++++  ..++++|+||||+|....  ..+.+.
T Consensus        20 la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~   97 (272)
T PRK07832         20 LAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDVVMNIAGISAW--GTVDRL   97 (272)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CccccC
Confidence            6789999999999988877776665432  2345679999999999999998  667889999999998755  677888


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  .++||++||..+..+.+....|+++|+++++|+++++.++.++||+++
T Consensus        98 ~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~  177 (272)
T PRK07832         98 THEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVALPWHAAYSASKFGLRGLSEVLRFDLARHGIGVS  177 (272)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            99999999999998                  368999999988888888999999999999999999999999999999


Q ss_pred             EEecCcccCcccchh
Q 042200          140 SIAHIVSATPFFCNA  154 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~  154 (181)
                      .|+||.++|++..+.
T Consensus       178 ~v~Pg~v~t~~~~~~  192 (272)
T PRK07832        178 VVVPGAVKTPLVNTV  192 (272)
T ss_pred             EEecCcccCcchhcc
Confidence            999999999986553

>PRK08278 short chain dehydrogenase; Provisional

Probab=99.93  E-value=3.8e-25  Score=166.76  Aligned_cols=151  Identities=21%  Similarity=0.159  Sum_probs=127.2

Q ss_pred             cccCCCEEEEeecchHH-------HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC
Q 042200            2 FIQHRAKVIIADVQDDL-------CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~   71 (181)
                      |+++|++|++++|+.+.       +++..+++... .++.++.+|+++.+++.+++++  ..++++|+||||||....  
T Consensus        26 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~--  103 (273)
T PRK08278         26 AARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKAVERFGGIDICVNNASAINL--  103 (273)
T ss_pred             HHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCC--
Confidence            67899999999997542       33333333322 4788999999999999999998  667899999999998765  


Q ss_pred             CCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccC--ccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           72 RTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIG--EALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~--~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      ..+.+.+.++|+..+++|+.                 .++|+++||..+..+.  +++..|+++|++++.|+++++.++.
T Consensus       104 ~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~el~  183 (273)
T PRK08278        104 TGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLNLDPKWFAPHTAYTMAKYGMSLCTLGLAEEFR  183 (273)
T ss_pred             CCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchhccccccCCcchhHHHHHHHHHHHHHHHHHhh
Confidence            67778889999999999999                 4789999998777766  7889999999999999999999999


Q ss_pred             CCCeEEEEEecC-cccCcccchh
Q 042200          133 QYDIRVNSIAHI-VSATPFFCNA  154 (181)
Q Consensus       133 ~~~i~v~~i~Pg-~v~t~~~~~~  154 (181)
                      ++||+||+|+|| .+.|++..++
T Consensus       184 ~~~I~v~~i~Pg~~i~t~~~~~~  206 (273)
T PRK08278        184 DDGIAVNALWPRTTIATAAVRNL  206 (273)
T ss_pred             hcCcEEEEEeCCCccccHHHHhc
Confidence            999999999999 6889865544

>PRK06947 glucose-1-dehydrogenase; Provisional

Probab=99.93  E-value=9.3e-25  Score=162.22  Aligned_cols=175  Identities=23%  Similarity=0.237  Sum_probs=135.0

Q ss_pred             cccCCCEEEEee-cchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIAD-VQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++ |+.+.++....++... .++.++.||+++.+++.+++++  ..++++|+||||||..... .++.+.
T Consensus        22 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~~-~~~~~~  100 (248)
T PRK06947         22 AAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLDALVNNAGIVAPS-MPLADM  100 (248)
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCC-CChhhC
Confidence            678999988765 5666666665555432 4789999999999999999988  5678999999999986542 456678


Q ss_pred             CHHHHHHhhheeec--------------------ceeEEEeccccccccCcc-chhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           78 DNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.++++..+++|+.                    .++||++||.++..+.+. +..|+++|+++++|+++++.++.++||
T Consensus       101 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~la~~~~~~~i  180 (248)
T PRK06947        101 DAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRLGSPNEYVDYAGSKGAVDTLTLGLAKELGPHGV  180 (248)
T ss_pred             CHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcCCCCCCCcccHhhHHHHHHHHHHHHHHhhhhCc
Confidence            88999999999988                    146999999888877664 568999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++.|+||+++|++....  ..++..+......  |++++.+|||
T Consensus       181 ~v~~i~Pg~v~t~~~~~~--~~~~~~~~~~~~~--~~~~~~~~e~  221 (248)
T PRK06947        181 RVNAVRPGLIETEIHASG--GQPGRAARLGAQT--PLGRAGEADE  221 (248)
T ss_pred             EEEEEeccCccccccccc--CCHHHHHHHhhcC--CCCCCcCHHH
Confidence            999999999999975421  1222222222222  6667666653

>PRK07109 short chain dehydrogenase; Provisional

Probab=99.93  E-value=5.2e-25  Score=170.33  Aligned_cols=149  Identities=21%  Similarity=0.213  Sum_probs=132.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.++++++++.  .+++++|++|||||....  .++.+.+
T Consensus        28 la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD~lInnAg~~~~--~~~~~~~  105 (334)
T PRK07109         28 FARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPIDTWVNNAMVTVF--GPFEDVT  105 (334)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCC--CchhhCC
Confidence            6789999999999998888777766433 4788999999999999999988  678999999999998765  7778899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC--CCeEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVN  139 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~--~~i~v~  139 (181)
                      .++++..+++|+.                 .|+||++||..+..+.+.+..|+++|+++++|+++++.|+..  .+|+++
T Consensus       106 ~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~  185 (334)
T PRK07109        106 PEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRSIPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVT  185 (334)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccCCCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEE
Confidence            9999999999987                 478999999999999999999999999999999999999975  479999


Q ss_pred             EEecCcccCcccc
Q 042200          140 SIAHIVSATPFFC  152 (181)
Q Consensus       140 ~i~Pg~v~t~~~~  152 (181)
                      .|+||.+.|++..
T Consensus       186 ~v~Pg~v~T~~~~  198 (334)
T PRK07109        186 MVQPPAVNTPQFD  198 (334)
T ss_pred             EEeCCCccCchhh
Confidence            9999999999754

>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]

Probab=99.93  E-value=4.7e-25  Score=163.44  Aligned_cols=150  Identities=20%  Similarity=0.162  Sum_probs=134.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--c--ccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--T--KFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~--~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|.++|+.|++.+-+++..+....+..+ .+...+..|+|++++++++.+.  +  ...++.+||||||+.... ++.+.
T Consensus        48 ~L~~~Gf~V~Agcl~~~gae~L~~~~~s-~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gLwglVNNAGi~~~~-g~~ew  125 (322)
T KOG1610|consen   48 KLDKKGFRVFAGCLTEEGAESLRGETKS-PRLRTLQLDVTKPESVKEAAQWVKKHLGEDGLWGLVNNAGISGFL-GPDEW  125 (322)
T ss_pred             HHHhcCCEEEEEeecCchHHHHhhhhcC-CcceeEeeccCCHHHHHHHHHHHHHhcccccceeEEecccccccc-Ccccc
Confidence            3678999999999888888888777732 3788889999999999988877  2  223599999999987654 78888


Q ss_pred             CCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.+++++.+++|++                +|+||++||..|..+.|...+||+||+|+++|+.+|++|+.++||+|..
T Consensus       126 l~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~~~p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~Vsi  205 (322)
T KOG1610|consen  126 LTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRVALPALGPYCVSKFAVEAFSDSLRRELRPFGVKVSI  205 (322)
T ss_pred             ccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCccCcccccchhhHHHHHHHHHHHHHHHHhcCcEEEE
Confidence            999999999999999                8999999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccc
Q 042200          141 IAHIVSATPFFC  152 (181)
Q Consensus       141 i~Pg~v~t~~~~  152 (181)
                      |-||+.+|+++.
T Consensus       206 iePG~f~T~l~~  217 (322)
T KOG1610|consen  206 IEPGFFKTNLAN  217 (322)
T ss_pred             eccCccccccCC
Confidence            999999999875

>PRK05993 short chain dehydrogenase; Provisional

Probab=99.93  E-value=6.2e-25  Score=165.92  Aligned_cols=146  Identities=21%  Similarity=0.161  Sum_probs=128.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.++.....     .+.++.+|++|.++++.+++.  ..+ +++|+||||||....  ..+.+.+
T Consensus        24 l~~~G~~Vi~~~r~~~~~~~l~~~-----~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~   96 (277)
T PRK05993         24 LQSDGWRVFATCRKEEDVAALEAE-----GLEAFQLDYAEPESIAALVAQVLELSGGRLDALFNNGAYGQP--GAVEDLP   96 (277)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHC-----CceEEEccCCCHHHHHHHHHHHHHHcCCCccEEEECCCcCCC--CCcccCC
Confidence            678999999999998877655331     477899999999999999987  333 689999999998766  7778889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++|+.+++++||++++|
T Consensus        97 ~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v  176 (277)
T PRK05993         97 TEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVPMKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLI  176 (277)
T ss_pred             HHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCCCCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEE
Confidence            9999999999986                 47899999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchh
Q 042200          142 AHIVSATPFFCNA  154 (181)
Q Consensus       142 ~Pg~v~t~~~~~~  154 (181)
                      +||+++|++..+.
T Consensus       177 ~Pg~v~T~~~~~~  189 (277)
T PRK05993        177 EPGPIETRFRANA  189 (277)
T ss_pred             ecCCccCchhhHH
Confidence            9999999987653

>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase

Probab=99.93  E-value=8.6e-25  Score=162.44  Aligned_cols=177  Identities=18%  Similarity=0.198  Sum_probs=145.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+..++....+... .++.++.+|+++.++++++++.  .+++++|++|||+|....  ..+.+.
T Consensus        22 ~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~   99 (250)
T TIGR03206        22 RFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVDVLVNNAGWDKF--GPFTKT   99 (250)
T ss_pred             HHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            36789999999999988777765555332 4688999999999999999988  567889999999998765  677778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.|+..+++|+.                 .+++|++||..+..+.+....|+.+|++++.++++++.++.+.+|+++.
T Consensus       100 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~  179 (250)
T TIGR03206       100 EPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGSSGEAVYAACKGGLVAFSKTMAREHARHGITVNV  179 (250)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEE
Confidence            88899999999988                 3689999999998888899999999999999999999999888999999


Q ss_pred             EecCcccCcccchhcCC--ChH-HHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI--DKK-TFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||.++|++.......  .++ ..+.+....  |.+++++|+|
T Consensus       180 v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  221 (250)
T TIGR03206       180 VCPGPTDTALLDDICGGAENPEKLREAFTRAI--PLGRLGQPDD  221 (250)
T ss_pred             EecCcccchhHHhhhhccCChHHHHHHHHhcC--CccCCcCHHH
Confidence            99999999986654321  222 334444554  6778877754

Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.

>PRK06138 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.4e-24  Score=161.47  Aligned_cols=152  Identities=26%  Similarity=0.347  Sum_probs=133.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+..+...+.+....++.++.+|++|.+++++++++  .+++++|+||||+|....  ..+.+.+.
T Consensus        25 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~vi~~ag~~~~--~~~~~~~~  102 (252)
T PRK06138         25 FAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLDVLVNNAGFGCG--GTVVTTDE  102 (252)
T ss_pred             HHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCH
Confidence            67899999999999887777666654224688999999999999999998  667899999999998766  67777888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++++..+++|+.                 .++|+++||..+..+.++...|+.+|++++.++++++.++..+||++++++
T Consensus       103 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~  182 (252)
T PRK06138        103 ADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGGRGRAAYVASKGAIASLTRAMALDHATDGIRVNAVA  182 (252)
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCCCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEE
Confidence            999999999987                 368999999988888888999999999999999999999999999999999


Q ss_pred             cCcccCcccchhc
Q 042200          143 HIVSATPFFCNAM  155 (181)
Q Consensus       143 Pg~v~t~~~~~~~  155 (181)
                      ||.+.|++.....
T Consensus       183 pg~~~t~~~~~~~  195 (252)
T PRK06138        183 PGTIDTPYFRRIF  195 (252)
T ss_pred             ECCccCcchhhhh
Confidence            9999999876553

>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.93  E-value=8.2e-25  Score=163.35  Aligned_cols=148  Identities=17%  Similarity=0.135  Sum_probs=124.9

Q ss_pred             cccCCCEEEEeecc-----------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccccc
Q 042200            2 FIQHRAKVIIADVQ-----------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-----------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~   67 (181)
                      |+++|++|++++|+           ..........+... .++.++.+|+++.+++..++++  .+++++|+||||||..
T Consensus        27 l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~  106 (256)
T PRK12748         27 LAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYS  106 (256)
T ss_pred             HHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcC
Confidence            67899999999987           22222233333221 3689999999999999999998  6778999999999986


Q ss_pred             CCCCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHH
Q 042200           68 SNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      ..  .++.+.+.++++..+++|+.                 .++||++||..+..+.++...|+++|+++++++++++.+
T Consensus       107 ~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  184 (256)
T PRK12748        107 TH--TRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQSLGPMPDELAYAATKGAIEAFTKSLAPE  184 (256)
T ss_pred             CC--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccccCCCCCchHHHHHHHHHHHHHHHHHHH
Confidence            65  67777888999999999988                 468999999988888888899999999999999999999


Q ss_pred             hcCCCeEEEEEecCcccCccc
Q 042200          131 LGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +.++||+++.|+||.++|++.
T Consensus       185 ~~~~~i~v~~i~Pg~~~t~~~  205 (256)
T PRK12748        185 LAEKGITVNAVNPGPTDTGWI  205 (256)
T ss_pred             HHHhCeEEEEEEeCcccCCCC
Confidence            999999999999999999864

>PRK12742 oxidoreductase; Provisional

Probab=99.93  E-value=1.4e-24  Score=160.19  Aligned_cols=166  Identities=19%  Similarity=0.202  Sum_probs=131.4

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|+++++ +.+..++...++    .+.++.+|+++.+++.++++  +++++|++|||||....  ....+.+.+
T Consensus        26 l~~~G~~v~~~~~~~~~~~~~l~~~~----~~~~~~~D~~~~~~~~~~~~--~~~~id~li~~ag~~~~--~~~~~~~~~   97 (237)
T PRK12742         26 FVTDGANVRFTYAGSKDAAERLAQET----GATAVQTDSADRDAVIDVVR--KSGALDILVVNAGIAVF--GDALELDAD   97 (237)
T ss_pred             HHHCCCEEEEecCCCHHHHHHHHHHh----CCeEEecCCCCHHHHHHHHH--HhCCCcEEEECCCCCCC--CCcccCCHH
Confidence            6789999988876 455555554443    25578899999999888887  45789999999998765  566677889


Q ss_pred             HHHHhhheeec---------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           81 KVKRVMIMVVF---------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        81 ~~~~~~~~n~~---------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      +|+..+++|+.               .++||++||..+. .+.++...|+++|++++.+++.++.++.++||+||+|+||
T Consensus        98 ~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg  177 (237)
T PRK12742         98 DIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMPVAGMAAYAASKSALQGMARGLARDFGPRGITINVVQPG  177 (237)
T ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCCCCCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecC
Confidence            99999999987               5799999998774 5678889999999999999999999999999999999999


Q ss_pred             cccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          145 VSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       145 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .++|++....   . ...+......  |++|+.+|+|
T Consensus       178 ~~~t~~~~~~---~-~~~~~~~~~~--~~~~~~~p~~  208 (237)
T PRK12742        178 PIDTDANPAN---G-PMKDMMHSFM--AIKRHGRPEE  208 (237)
T ss_pred             cccCCccccc---c-HHHHHHHhcC--CCCCCCCHHH
Confidence            9999985432   1 1222223333  7788888865

>PLN02780 ketoreductase/ oxidoreductase

Probab=99.93  E-value=9.7e-25  Score=167.84  Aligned_cols=151  Identities=17%  Similarity=0.182  Sum_probs=123.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCC--hhHHHHHHHh-cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTI--DSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~--~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|+.+++++..+++...   .++..+.+|+++  .+.++.+.+. .. ..+|++|||||........+
T Consensus        72 ~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~-~didilVnnAG~~~~~~~~~  150 (320)
T PLN02780         72 QLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEG-LDVGVLINNVGVSYPYARFF  150 (320)
T ss_pred             HHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcC-CCccEEEEecCcCCCCCccc
Confidence            37889999999999999998887776432   367888999985  3444544443 21 25779999999864321457


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccc-c-CccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATET-I-GEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~-~-~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .+.+.++++..+++|+.                 .|+||++||.++.. + .|....|++||+++++|+++|+.|++++|
T Consensus       151 ~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~~p~~~~Y~aSKaal~~~~~~L~~El~~~g  230 (320)
T PLN02780        151 HEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPSDPLYAVYAATKAYIDQFSRCLYVEYKKSG  230 (320)
T ss_pred             ccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCccchHHHHHHHHHHHHHHHHHHHHhccC
Confidence            78889999999999998                 58999999998865 3 57889999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccc
Q 042200          136 IRVNSIAHIVSATPFFC  152 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~  152 (181)
                      |+|++|+||+++|++..
T Consensus       231 I~V~~v~PG~v~T~~~~  247 (320)
T PLN02780        231 IDVQCQVPLYVATKMAS  247 (320)
T ss_pred             eEEEEEeeCceecCccc
Confidence            99999999999999865

>PRK07825 short chain dehydrogenase; Provisional

Probab=99.93  E-value=1.3e-24  Score=163.72  Aligned_cols=147  Identities=23%  Similarity=0.330  Sum_probs=132.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.+++..+.+.   ++.++.+|+++.+++.++++.  ..++++|++|||||....  ..+.+.+.
T Consensus        25 l~~~G~~v~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~~~~~~   99 (273)
T PRK07825         25 LAALGARVAIGDLDEALAKETAAELG---LVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVNNAGVMPV--GPFLDEPD   99 (273)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHhc---cceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CccccCCH
Confidence            67899999999999988887766654   477899999999999999998  567899999999998766  77778889


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +.++..+++|+.                 .|+||++||.++..+.+++..|+++|+++.+|+++++.++.++||++++|+
T Consensus       100 ~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~  179 (273)
T PRK07825        100 AVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIPVPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVL  179 (273)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEe
Confidence            999999999986                 468999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccch
Q 042200          143 HIVSATPFFCN  153 (181)
Q Consensus       143 Pg~v~t~~~~~  153 (181)
                      ||++.|++...
T Consensus       180 Pg~v~t~~~~~  190 (273)
T PRK07825        180 PSFVNTELIAG  190 (273)
T ss_pred             CCcCcchhhcc
Confidence            99999997654

>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]

Probab=99.92  E-value=1.3e-25  Score=159.20  Aligned_cols=143  Identities=22%  Similarity=0.355  Sum_probs=123.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|..+.+++-+.+..+.. +++++.   .++.+++||+++..++++.+++  .+||.+|++||+||+..       
T Consensus        24 ~Ll~kgik~~~i~~~~En~~a~-akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~iDIlINgAGi~~-------   95 (261)
T KOG4169|consen   24 ALLEKGIKVLVIDDSEENPEAI-AKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGTIDILINGAGILD-------   95 (261)
T ss_pred             HHHHcCchheeehhhhhCHHHH-HHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCceEEEEccccccc-------
Confidence            4788998877776665554433 333332   7899999999999999999999  88999999999999864       


Q ss_pred             cCCHHHHHHhhheeec--------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHH--hcC
Q 042200           76 DTDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE--LGQ  133 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~--~~~  133 (181)
                         +.+|++++.+|+.                    +|-||++||.+++.|.|..+.|++||+++.+|+|+++..  |.+
T Consensus        96 ---dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P~p~~pVY~AsKaGVvgFTRSla~~ayy~~  172 (261)
T KOG4169|consen   96 ---DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDPMPVFPVYAASKAGVVGFTRSLADLAYYQR  172 (261)
T ss_pred             ---chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCccccchhhhhcccceeeeehhhhhhhhHhh
Confidence               3459999999998                    688999999999999999999999999999999999765  567


Q ss_pred             CCeEEEEEecCcccCcccchh
Q 042200          134 YDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      .||++++++||++.|++..++
T Consensus       173 sGV~~~avCPG~t~t~l~~~~  193 (261)
T KOG4169|consen  173 SGVRFNAVCPGFTRTDLAENI  193 (261)
T ss_pred             cCEEEEEECCCcchHHHHHHH
Confidence            899999999999999987776

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=99.92  E-value=1.4e-24  Score=161.53  Aligned_cols=168  Identities=20%  Similarity=0.187  Sum_probs=136.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.      .....  .++.++.+|+++.+++.+++++  .+++++|+||||+|....  .++.+.+.
T Consensus        28 l~~~G~~v~~~~~~~------~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~   97 (252)
T PRK08220         28 FVEAGAKVIGFDQAF------LTQED--YPFATFVLDVSDAAAVAQVCQRLLAETGPLDVLVNAAGILRM--GATDSLSD   97 (252)
T ss_pred             HHHCCCEEEEEecch------hhhcC--CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCCH
Confidence            678999999999986      11112  3688899999999999999998  667899999999998766  67777889


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++++..+++|+.                 .++||++||..+..+.++...|+++|++++.++++++.++.++||++++|+
T Consensus        98 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~  177 (252)
T PRK08220         98 EDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVPRIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVS  177 (252)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEe
Confidence            999999999988                 468999999988888888899999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCCh-------HHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDK-------KTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||.+.|++.........       +..+.+....  |++++.+|+|
T Consensus       178 pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  221 (252)
T PRK08220        178 PGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGI--PLGKIARPQE  221 (252)
T ss_pred             cCcCcchhhhhhccchhhhhhhhhhHHHHHhhcC--CCcccCCHHH
Confidence            99999997654332111       1123333344  7788888764

>PRK12824 acetoacetyl-CoA reductase; Provisional

Probab=99.92  E-value=3.2e-24  Score=158.85  Aligned_cols=172  Identities=17%  Similarity=0.207  Sum_probs=137.4

Q ss_pred             cccCCCEEEEeecchH-HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDD-LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.. ..++....+... .++.++.+|+++.+++.++++.  .+++++|++|||+|....  ..+.+.
T Consensus        22 l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~   99 (245)
T PRK12824         22 LLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVDILVNNAGITRD--SVFKRM   99 (245)
T ss_pred             HHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CccccC
Confidence            6778999999999853 233333332222 4688999999999999999988  667889999999998766  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..++.|+.                 .++||++||..+..+.++...|+++|++++.++++++.++.++||+++.
T Consensus       100 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~  179 (245)
T PRK12824        100 SHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKGQFGQTNYSAAKAGMIGFTKALASEGARYGITVNC  179 (245)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEE
Confidence            89999999999888                 5789999999999888899999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      ++||.+.|++....   .+...+.+....  |++++.+|+
T Consensus       180 v~pg~~~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~  214 (245)
T PRK12824        180 IAPGYIATPMVEQM---GPEVLQSIVNQI--PMKRLGTPE  214 (245)
T ss_pred             EEEcccCCcchhhc---CHHHHHHHHhcC--CCCCCCCHH
Confidence            99999999976543   223333333333  556665554

>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase

Probab=99.92  E-value=2.7e-24  Score=158.97  Aligned_cols=172  Identities=17%  Similarity=0.150  Sum_probs=139.8

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++.| +.+..++...++... .++.++.+|+++.+++.++++.  ..++++|+||||+|....  ..+.+.
T Consensus        20 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~   97 (242)
T TIGR01829        20 LAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPIDVLVNNAGITRD--ATFKKM   97 (242)
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhC
Confidence            6789999999988 666665554443322 4688999999999999999988  567889999999998765  667778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..++.|+.                 .++||++||..+..+.+++..|+++|++++.++++++.++.+.||++++
T Consensus        98 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~  177 (242)
T TIGR01829        98 TYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQFGQTNYSAAKAGMIGFTKALAQEGATKGVTVNT  177 (242)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            88999999988877                 3689999999988888899999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      ++||++.|++....   .++..+.+....  |++++.+|+
T Consensus       178 i~pg~~~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~  212 (242)
T TIGR01829       178 ISPGYIATDMVMAM---REDVLNSIVAQI--PVGRLGRPE  212 (242)
T ss_pred             EeeCCCcCcccccc---chHHHHHHHhcC--CCCCCcCHH
Confidence            99999999986543   234444444444  667777664

(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.

>TIGR02685 pter_reduc_Leis pteridine reductase

Probab=99.92  E-value=2.4e-24  Score=161.80  Aligned_cols=147  Identities=20%  Similarity=0.254  Sum_probs=116.7

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC--CceEEEeeecCChhHH----HHHHHh--cccCCccEEEEcccccCCCC
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD--ELISYVCCNVTIDSDV----KNVFDF--TKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i----~~~~~~--~~~~~id~vi~~ag~~~~~~   71 (181)
                      +|+++|++|++++| +.+.++...+++...  .++.++.+|++|.+++    +++++.  ..++++|+||||||....  
T Consensus        20 ~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~--   97 (267)
T TIGR02685        20 ALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRAFGRCDVLVNNASAFYP--   97 (267)
T ss_pred             HHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHccCCceEEEECCccCCC--
Confidence            36789999999875 466776666666432  3577899999999865    445554  567899999999997654  


Q ss_pred             CCcccCCH-----------HHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhH
Q 042200           72 RTTLDTDN-----------EKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSK  117 (181)
Q Consensus        72 ~~~~~~~~-----------~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK  117 (181)
                      .++.+.+.           +.|.+.+++|+.                       .+.|++++|..+..+.+++..|+++|
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~~~~~~Y~asK  177 (267)
T TIGR02685        98 TPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPLLGFTMYTMAK  177 (267)
T ss_pred             CcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCCcccchhHHHH
Confidence            33333222           358888999886                       14699999998888888999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          118 YAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       118 ~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +++++|+++|+.++.++||++++|+||++.|+
T Consensus       178 ~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~  209 (267)
T TIGR02685       178 HALEGLTRSAALELAPLQIRVNGVAPGLSLLP  209 (267)
T ss_pred             HHHHHHHHHHHHHHhhhCeEEEEEecCCccCc
Confidence            99999999999999999999999999999876

Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.

>PRK12935 acetoacetyl-CoA reductase; Provisional

Probab=99.92  E-value=3.4e-24  Score=159.10  Aligned_cols=173  Identities=24%  Similarity=0.315  Sum_probs=138.7

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++.+ +.+..++..+.+... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+.+.
T Consensus        26 l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  103 (247)
T PRK12935         26 LAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKVDILVNNAGITRD--RTFKKL  103 (247)
T ss_pred             HHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            6789999887655 455555555555433 4689999999999999999998  667899999999998765  667778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..+++|+.                 .+++|++||..+..+.+++..|+++|++++.|+++++.++.+.||+++.
T Consensus       104 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~  183 (247)
T PRK12935        104 NREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGGFGQTNYSAAKAGMLGFTKSLALELAKTNVTVNA  183 (247)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence            88999999999988                 4689999999888888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||.++|++....+   ...........  +.+++.+|+|
T Consensus       184 v~pg~v~t~~~~~~~---~~~~~~~~~~~--~~~~~~~~ed  219 (247)
T PRK12935        184 ICPGFIDTEMVAEVP---EEVRQKIVAKI--PKKRFGQADE  219 (247)
T ss_pred             EEeCCCcChhhhhcc---HHHHHHHHHhC--CCCCCcCHHH
Confidence            999999998765432   22233333333  4466666654

>PRK05875 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.3e-24  Score=161.09  Aligned_cols=176  Identities=22%  Similarity=0.175  Sum_probs=139.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+..+...+++...   .++.++.+|+++.+++.+++++  .+++++|++|||||..... .++.+
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~~-~~~~~  105 (276)
T PRK05875         27 LVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHGRLHGVVHCAGGSETI-GPITQ  105 (276)
T ss_pred             HHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCC-CChhh
Confidence            6789999999999987776665555321   3688899999999999999988  6678999999999975431 45666


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|..++++|+.                 .++|+++||..+..+.++...|+++|++++.+++.++.++...+|+++
T Consensus       106 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~  185 (276)
T PRK05875        106 IDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMKLAADELGPSWVRVN  185 (276)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            788889999999888                 368999999988888888899999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .|+||+++|++...... ............  |++++++|+|
T Consensus       186 ~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  224 (276)
T PRK05875        186 SIRPGLIRTDLVAPITE-SPELSADYRACT--PLPRVGEVED  224 (276)
T ss_pred             EEecCccCCcccccccc-CHHHHHHHHcCC--CCCCCcCHHH
Confidence            99999999998654322 222223333333  5677766653

>PRK06914 short chain dehydrogenase; Provisional

Probab=99.92  E-value=4.7e-24  Score=161.16  Aligned_cols=148  Identities=22%  Similarity=0.277  Sum_probs=128.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+.++...+++..   ..++.++.+|++|.+++.. +++  ..++++|+||||||....  ..+.+
T Consensus        23 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~id~vv~~ag~~~~--~~~~~   99 (280)
T PRK06914         23 LAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGRIDLLVNNAGYANG--GFVEE   99 (280)
T ss_pred             HHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCCeeEEEECCccccc--Ccccc
Confidence            678999999999998877766554432   1368899999999999998 776  667899999999998766  67777


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++++..+++|+.                 .++||++||..+..+.+++..|+.+|++++.|+++++.++.++||+++
T Consensus       100 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~  179 (280)
T PRK06914        100 IPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVGFPGLSPYVSSKYALEGFSESLRLELKPFGIDVA  179 (280)
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCCCCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEE
Confidence            888999999988887                 468999999988888899999999999999999999999999999999


Q ss_pred             EEecCcccCcccc
Q 042200          140 SIAHIVSATPFFC  152 (181)
Q Consensus       140 ~i~Pg~v~t~~~~  152 (181)
                      .++||.++|+++.
T Consensus       180 ~v~pg~~~t~~~~  192 (280)
T PRK06914        180 LIEPGSYNTNIWE  192 (280)
T ss_pred             EEecCCcccchhh
Confidence            9999999999764

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=5.6e-24  Score=158.18  Aligned_cols=174  Identities=23%  Similarity=0.276  Sum_probs=137.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC------CC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM------DR   72 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~------~~   72 (181)
                      |+++|++|++++|+.++++...+++... .++.++.+|+++.+++.++++.  ..++++|+||||||.....      +.
T Consensus        25 l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~  104 (253)
T PRK08217         25 LAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDG  104 (253)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCcCcccccccc
Confidence            6788999999999988877776665432 4788999999999999999998  4557899999999975431      01


Q ss_pred             Cc-ccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           73 TT-LDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        73 ~~-~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      .+ .+.+.+.+..++++|+.                  .+.|+++||. +..+.+++..|+++|+++++++++|+.++.+
T Consensus       105 ~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~-~~~~~~~~~~Y~~sK~a~~~l~~~la~~~~~  183 (253)
T PRK08217        105 KVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSI-ARAGNMGQTNYSASKAGVAAMTVTWAKELAR  183 (253)
T ss_pred             cccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccc-cccCCCCCchhHHHHHHHHHHHHHHHHHHHH
Confidence            11 56678889999998886                  3678888886 4567778899999999999999999999998


Q ss_pred             CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++++++||++.|++....   .++..+.+....  |.+++++|+|
T Consensus       184 ~~i~v~~v~pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~  226 (253)
T PRK08217        184 YGIRVAAIAPGVIETEMTAAM---KPEALERLEKMI--PVGRLGEPEE  226 (253)
T ss_pred             cCcEEEEEeeCCCcCcccccc---CHHHHHHHHhcC--CcCCCcCHHH
Confidence            999999999999999987543   345555555554  6677777754

>PRK05866 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.1e-24  Score=163.34  Aligned_cols=150  Identities=21%  Similarity=0.281  Sum_probs=126.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC-
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT-   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~-   77 (181)
                      |+++|++|++++|+.+.+++..+++... ..+.++.+|++|.+++.++++.  ..++++|++|||||....  ..+.+. 
T Consensus        60 La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id~li~~AG~~~~--~~~~~~~  137 (293)
T PRK05866         60 FARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVDILINNAGRSIR--RPLAESL  137 (293)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--cchhhcc
Confidence            6789999999999998888777666432 4688999999999999999998  667899999999998755  444432 


Q ss_pred             -CHHHHHHhhheeec-----------------ceeEEEeccccccc-cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 -DNEKVKRVMIMVVF-----------------LGVLLFTANLATET-IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 -~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                       +.++++..+++|+.                 .++||++||.++.. +.+....|+++|+++++|+++++.++.++||++
T Consensus       138 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v  217 (293)
T PRK05866        138 DRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLSEASPLFSVYNASKAALSAVSRVIETEWGDRGVHS  217 (293)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhcccCcEE
Confidence             45778888999886                 47999999976654 357788999999999999999999999999999


Q ss_pred             EEEecCcccCcccch
Q 042200          139 NSIAHIVSATPFFCN  153 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~  153 (181)
                      ++|+||+++|++...
T Consensus       218 ~~v~pg~v~T~~~~~  232 (293)
T PRK05866        218 TTLYYPLVATPMIAP  232 (293)
T ss_pred             EEEEcCcccCccccc
Confidence            999999999998754

>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=99.92  E-value=1.1e-24  Score=161.38  Aligned_cols=155  Identities=21%  Similarity=0.200  Sum_probs=120.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|++++|+.++.+          ...++.+|+++.+++++++++ .  +++|+||||||....          
T Consensus         4 ~l~~~G~~Vv~~~r~~~~~~----------~~~~~~~Dl~~~~~v~~~~~~~~--~~iD~li~nAG~~~~----------   61 (241)
T PRK12428          4 LLRFLGARVIGVDRREPGMT----------LDGFIQADLGDPASIDAAVAALP--GRIDALFNIAGVPGT----------   61 (241)
T ss_pred             HHHhCCCEEEEEeCCcchhh----------hhHhhcccCCCHHHHHHHHHHhc--CCCeEEEECCCCCCC----------
Confidence            47889999999999876542          123579999999999999987 3  679999999997532          


Q ss_pred             HHHHHhhheeec---------------ceeEEEeccccccc---------------------------cCccchhhHhhH
Q 042200           80 EKVKRVMIMVVF---------------LGVLLFTANLATET---------------------------IGEALYDYLMSK  117 (181)
Q Consensus        80 ~~~~~~~~~n~~---------------~~~iv~iss~~~~~---------------------------~~~~~~~y~~sK  117 (181)
                      +.++..+++|+.               .|+||++||.++..                           +.++...|++||
T Consensus        62 ~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  141 (241)
T PRK12428         62 APVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSK  141 (241)
T ss_pred             CCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHH
Confidence            236778888877               47999999988762                           456778999999


Q ss_pred             HHHHHHHHHHH-HHhcCCCeEEEEEecCcccCcccchhcCCC-hHHHHHHHHHhhcccccccccCC
Q 042200          118 YAVLGLMKNLC-VELGQYDIRVNSIAHIVSATPFFCNAMGID-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       118 ~a~~~l~~~la-~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++++|+++++ .+++++||+||+|+||.+.|+|.....+.. ++...+  ...  |++|+++|||
T Consensus       142 ~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~--~~~--~~~~~~~pe~  203 (241)
T PRK12428        142 EALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDS--DAK--RMGRPATADE  203 (241)
T ss_pred             HHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhh--ccc--ccCCCCCHHH
Confidence            99999999999 999999999999999999999875532211 111111  122  7788888865

>PRK06179 short chain dehydrogenase; Provisional

Probab=99.92  E-value=3.9e-24  Score=160.80  Aligned_cols=146  Identities=21%  Similarity=0.230  Sum_probs=129.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+..+..       ..+.++.+|++|.++++++++.  ..++++|+||||||....  ..+.+.+
T Consensus        23 ~l~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ag~~~~--~~~~~~~   93 (270)
T PRK06179         23 KLARAGYRVFGTSRNPARAAPI-------PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNNAGVGLA--GAAEESS   93 (270)
T ss_pred             HHHHCCCEEEEEeCChhhcccc-------CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCC--cCcccCC
Confidence            3678999999999987654321       2578899999999999999998  677899999999998766  7777889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..+++|+.                 .++||++||..+..+.+....|+++|++++.++++++.+++++||++++|
T Consensus        94 ~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v  173 (270)
T PRK06179         94 IAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLPAPYMALYAASKHAVEGYSESLDHEVRQFGIRVSLV  173 (270)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEE
Confidence            9999999999986                 57999999999999888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhc
Q 042200          142 AHIVSATPFFCNAM  155 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~  155 (181)
                      +||++.|++..+..
T Consensus       174 ~pg~~~t~~~~~~~  187 (270)
T PRK06179        174 EPAYTKTNFDANAP  187 (270)
T ss_pred             eCCCcccccccccC
Confidence            99999999876543

>PRK07454 short chain dehydrogenase; Provisional

Probab=99.92  E-value=5.9e-24  Score=157.34  Aligned_cols=150  Identities=20%  Similarity=0.212  Sum_probs=131.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+..+...+.+... .++.++.+|+++.+++.++++.  .+++++|+||||||....  .++.+.
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~  102 (241)
T PRK07454         25 AFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPDVLINNAGMAYT--GPLLEM  102 (241)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCC--CchhhC
Confidence            36789999999999988777766555432 4788999999999999999988  667899999999998765  667778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..+++|+.                 .++||++||..+..+.+++..|+.+|++++.++++++.++.++||+++.
T Consensus       103 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~  182 (241)
T PRK07454        103 PLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAFPQWGAYCVSKAALAAFTKCLAEEERSHGIRVCT  182 (241)
T ss_pred             CHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCCCCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence            88999999999987                 3689999999988888889999999999999999999999999999999


Q ss_pred             EecCcccCcccc
Q 042200          141 IAHIVSATPFFC  152 (181)
Q Consensus       141 i~Pg~v~t~~~~  152 (181)
                      |+||++.|++..
T Consensus       183 i~pg~i~t~~~~  194 (241)
T PRK07454        183 ITLGAVNTPLWD  194 (241)
T ss_pred             EecCcccCCccc
Confidence            999999999754

>PRK06198 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.2e-24  Score=158.82  Aligned_cols=148  Identities=25%  Similarity=0.260  Sum_probs=128.7

Q ss_pred             cccCCCE-EEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAK-VIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++ |++++|+.++.+...+++... .++.++.+|+++.+++.++++.  .+++++|++|||+|....  ..+.+.
T Consensus        26 l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~~  103 (260)
T PRK06198         26 FAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRLDALVNAAGLTDR--GTILDT  103 (260)
T ss_pred             HHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCC--CChhhC
Confidence            6788999 999999987777665555322 4688899999999999999988  667889999999998765  667778


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.+.|+..+++|+.                  .+++|++||..+..+.+....|+.+|+++++|+++++.++...+|+++
T Consensus       104 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~  183 (260)
T PRK06198        104 SPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQPFLAAYCASKGALATLTRNAAYALLRNRIRVN  183 (260)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            88999999999987                  268999999998888888899999999999999999999999999999


Q ss_pred             EEecCcccCccc
Q 042200          140 SIAHIVSATPFF  151 (181)
Q Consensus       140 ~i~Pg~v~t~~~  151 (181)
                      .|+||++.|++.
T Consensus       184 ~i~pg~~~t~~~  195 (260)
T PRK06198        184 GLNIGWMATEGE  195 (260)
T ss_pred             EEeeccccCcch
Confidence            999999999874

>PRK12746 short chain dehydrogenase; Provisional

Probab=99.92  E-value=6.1e-24  Score=158.33  Aligned_cols=151  Identities=21%  Similarity=0.206  Sum_probs=128.9

Q ss_pred             cccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc------CCccEEEEcccccCCCC
Q 042200            2 FIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF------GKLDIMFNNAGIISNMD   71 (181)
Q Consensus         2 l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~------~~id~vi~~ag~~~~~~   71 (181)
                      |+++|++|+++ .|+.+++++..+.+... .++.++.+|++|.+++.+++++  .++      +++|++|||||....  
T Consensus        26 l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--  103 (254)
T PRK12746         26 LANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQ--  103 (254)
T ss_pred             HHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccccCCCCccEEEECCCCCCC--
Confidence            67899998775 78877777666665432 4688999999999999999887  333      469999999998765  


Q ss_pred             CCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           72 RTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      ..+.+.+.+.|+..+++|+.               .+++|++||..+..+.+++..|+++|++++.++++++.++.++|+
T Consensus       104 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i  183 (254)
T PRK12746        104 GTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEVRLGFTGSIAYGLSKGALNTMTLPLAKHLGERGI  183 (254)
T ss_pred             CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHhcCCCCCCcchHhhHHHHHHHHHHHHHHHhhcCc
Confidence            67777889999999999988               368999999988888889999999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchh
Q 042200          137 RVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~  154 (181)
                      +++.++||+++|++....
T Consensus       184 ~v~~v~pg~~~t~~~~~~  201 (254)
T PRK12746        184 TVNTIMPGYTKTDINAKL  201 (254)
T ss_pred             EEEEEEECCccCcchhhh
Confidence            999999999999986554

>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.92  E-value=5e-24  Score=163.12  Aligned_cols=150  Identities=21%  Similarity=0.257  Sum_probs=128.2

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++.+++ .+..++..+++... .++.++.+|+++.+++.++++. .+++++|+||||||....  ..+.+.
T Consensus        31 ~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~iD~li~nAG~~~~--~~~~~~  108 (306)
T PRK07792         31 GLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGLDIVVNNAGITRD--RMLFNM  108 (306)
T ss_pred             HHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CCcccC
Confidence            367899999999885 44555665655432 4788999999999999999998 338999999999998776  677788


Q ss_pred             CHHHHHHhhheeec---------------c---------eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           78 DNEKVKRVMIMVVF---------------L---------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        78 ~~~~~~~~~~~n~~---------------~---------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      +.++|+..+++|+.               .         |+||++||.++..+.+++..|+++|+++++|+++++.++.+
T Consensus       109 ~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~  188 (306)
T PRK07792        109 SDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAGLVGPVGQANYGAAKAGITALTLSAARALGR  188 (306)
T ss_pred             CHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCcccccCCCCCchHHHHHHHHHHHHHHHHHHhhh
Confidence            99999999999987               1         68999999999888888999999999999999999999999


Q ss_pred             CCeEEEEEecCcccCcccch
Q 042200          134 YDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +||+||+|+|| ..|+|...
T Consensus       189 ~gI~vn~i~Pg-~~t~~~~~  207 (306)
T PRK07792        189 YGVRANAICPR-ARTAMTAD  207 (306)
T ss_pred             cCeEEEEECCC-CCCchhhh
Confidence            99999999999 47877544

>PRK06196 oxidoreductase; Provisional

Probab=99.92  E-value=4.7e-24  Score=163.90  Aligned_cols=147  Identities=16%  Similarity=0.081  Sum_probs=122.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++.   .+.++.+|++|.+++++++++  ..++++|+||||||....  .  ...+
T Consensus        45 ~L~~~G~~Vv~~~R~~~~~~~~~~~l~---~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~--~~~~  117 (315)
T PRK06196         45 ALAQAGAHVIVPARRPDVAREALAGID---GVEVVMLDLADLESVRAFAERFLDSGRRIDILINNAGVMAC--P--ETRV  117 (315)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhh---hCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEEECCCCCCC--C--CccC
Confidence            367899999999999888887766664   378899999999999999998  567899999999997643  2  2345


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccc------------cCccchhhHhhHHHHHHHHHHHHH
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATET------------IGEALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      .++|+..+++|+.                 .++||++||.++..            +.+++..|+.||++++.+++.++.
T Consensus       118 ~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~  197 (315)
T PRK06196        118 GDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRWDDPHFTRGYDKWLAYGQSKTANALFAVHLDK  197 (315)
T ss_pred             CccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCccccCccCCCChHHHHHHHHHHHHHHHHHHHH
Confidence            6778888999877                 37899999976532            234567899999999999999999


Q ss_pred             HhcCCCeEEEEEecCcccCcccchh
Q 042200          130 ELGQYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ++.++||++++|+||++.|++....
T Consensus       198 ~~~~~gi~v~~v~PG~v~t~~~~~~  222 (315)
T PRK06196        198 LGKDQGVRAFSVHPGGILTPLQRHL  222 (315)
T ss_pred             HhcCCCcEEEEeeCCcccCCccccC
Confidence            9999999999999999999986554

>PRK07074 short chain dehydrogenase; Provisional

Probab=99.92  E-value=1.2e-23  Score=157.09  Aligned_cols=173  Identities=17%  Similarity=0.213  Sum_probs=137.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++++...+.+.. .++.++.+|+++.+++..++++  .+++++|++|||+|....  ..+.+.+.
T Consensus        22 L~~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~   98 (257)
T PRK07074         22 FLAAGDRVLALDIDAAALAAFADALGD-ARFVPVACDLTDAASLAAALANAAAERGPVDVLVANAGAARA--ASLHDTTP   98 (257)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            678999999999998888777766643 4688999999999999999988  667889999999998765  56677888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|...+.+|+.                 .++||++||..+... .+...|+.+|++++.++++++.+++++||++++++
T Consensus        99 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~  177 (257)
T PRK07074         99 ASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAA-LGHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVA  177 (257)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCC-CCCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEE
Confidence            899988888877                 478999999766543 35678999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      ||++.|++.....+..++.........  |++++..|+
T Consensus       178 pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  213 (257)
T PRK07074        178 PGTVKTQAWEARVAANPQVFEELKKWY--PLQDFATPD  213 (257)
T ss_pred             eCcCCcchhhcccccChHHHHHHHhcC--CCCCCCCHH
Confidence            999999976543332333333333332  556666654

>PRK08267 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=157.11  Aligned_cols=150  Identities=24%  Similarity=0.224  Sum_probs=133.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cc-cCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TK-FGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~-~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++....+.. .++.++.+|+++.+++.++++.  .. ++++|+||||||....  ..+.+.
T Consensus        20 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~   96 (260)
T PRK08267         20 LFAAEGWRVGAYDINEAGLAALAAELGA-GNAWTGALDVTDRAAWDAALADFAAATGGRLDVLFNNAGILRG--GPFEDI   96 (260)
T ss_pred             HHHHCCCeEEEEeCCHHHHHHHHHHhcC-CceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCC--CccccC
Confidence            3678999999999999888887766652 3688999999999999999987  33 6889999999998766  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..+++|+.                 .++||++||..+..+.+....|+.+|++++.++++++.++.++||++++
T Consensus        97 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~  176 (260)
T PRK08267         97 PLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQPGLAVYSATKFAVRGLTEALDLEWRRHGIRVAD  176 (260)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            89999999999998                 4789999999999998999999999999999999999999999999999


Q ss_pred             EecCcccCcccch
Q 042200          141 IAHIVSATPFFCN  153 (181)
Q Consensus       141 i~Pg~v~t~~~~~  153 (181)
                      |+||++.|++...
T Consensus       177 i~pg~~~t~~~~~  189 (260)
T PRK08267        177 VMPLFVDTAMLDG  189 (260)
T ss_pred             EecCCcCCccccc
Confidence            9999999997653

>PRK05693 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1e-23  Score=158.91  Aligned_cols=145  Identities=23%  Similarity=0.249  Sum_probs=127.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.++....   .  .+.++.+|+++.+++.++++.  ..++++|+||||||....  .++.+.+.
T Consensus        21 l~~~G~~V~~~~r~~~~~~~~~~---~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~~   93 (274)
T PRK05693         21 FKAAGYEVWATARKAEDVEALAA---A--GFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAGYGAM--GPLLDGGV   93 (274)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHH---C--CCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCCH
Confidence            67889999999999877665432   1  467889999999999999988  567889999999998765  67778889


Q ss_pred             HHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           80 EKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++++..+++|+.                .|+||++||..+..+.+....|+++|++++.|+++++.++.++||++++|+|
T Consensus        94 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~p  173 (274)
T PRK05693         94 EAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVTPFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQP  173 (274)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEec
Confidence            999999999998                4789999999998888889999999999999999999999999999999999


Q ss_pred             CcccCcccch
Q 042200          144 IVSATPFFCN  153 (181)
Q Consensus       144 g~v~t~~~~~  153 (181)
                      |.++|++..+
T Consensus       174 g~v~t~~~~~  183 (274)
T PRK05693        174 GAIASQFASN  183 (274)
T ss_pred             Cccccccccc
Confidence            9999998654

>PRK12744 short chain dehydrogenase; Provisional

Probab=99.91  E-value=4.8e-24  Score=159.33  Aligned_cols=150  Identities=17%  Similarity=0.212  Sum_probs=120.5

Q ss_pred             cccCCCEEEEeecc----hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQ----DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|++++++    .+..++..+++... .++.++.+|+++.+++.+++++  .+++++|++|||||....  ..+
T Consensus        28 l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~  105 (257)
T PRK12744         28 LAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAFGRPDIAINTVGKVLK--KPI  105 (257)
T ss_pred             HHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhhCCCCEEEECCcccCC--CCc
Confidence            67889997776643    34444444444322 3688899999999999999998  667899999999998765  677


Q ss_pred             ccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           75 LDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.++|+..+++|+.               .+++++++|.......+.+..|+++|++++.|+++++.++.++||+|+
T Consensus       106 ~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  185 (257)
T PRK12744        106 VEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFTPFYSAYAGSKAPVEHFTRAASKEFGARGISVT  185 (257)
T ss_pred             ccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccCCCcccchhhHHHHHHHHHHHHHHhCcCceEEE
Confidence            77889999999999988               367777644333344577889999999999999999999999999999


Q ss_pred             EEecCcccCcccch
Q 042200          140 SIAHIVSATPFFCN  153 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~  153 (181)
                      .++||++.|++..+
T Consensus       186 ~v~pg~v~t~~~~~  199 (257)
T PRK12744        186 AVGPGPMDTPFFYP  199 (257)
T ss_pred             EEecCccccchhcc
Confidence            99999999997644

>PRK06194 hypothetical protein; Provisional

Probab=99.91  E-value=1.4e-23  Score=159.04  Aligned_cols=151  Identities=22%  Similarity=0.268  Sum_probs=132.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++...++... .++.++.+|++|.+++.++++.  ..++++|+||||||....  ..+.+.
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~--~~~~~~  102 (287)
T PRK06194         25 IGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVHLLFNNAGVGAG--GLVWEN  102 (287)
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            36789999999999988877776666442 4688899999999999999988  667899999999999776  677788


Q ss_pred             CHHHHHHhhheeec-----------------c------eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--
Q 042200           78 DNEKVKRVMIMVVF-----------------L------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--  132 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--  132 (181)
                      +.++|+..+++|+.                 .      |+||++||.++..+.++...|+++|++++.|+++++.++.  
T Consensus       103 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~  182 (287)
T PRK06194        103 SLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGLLAPPAMGIYNVSKHAVVSLTETLYQDLSLV  182 (287)
T ss_pred             CHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCcchHHHHHHHHHHHHHHHHHHhhc
Confidence            89999999999998                 2      7899999999998888999999999999999999999987  


Q ss_pred             CCCeEEEEEecCcccCcccch
Q 042200          133 QYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ..+|++++++||++.|++...
T Consensus       183 ~~~irv~~v~pg~i~t~~~~~  203 (287)
T PRK06194        183 TDQVGASVLCPYFVPTGIWQS  203 (287)
T ss_pred             CCCeEEEEEEeCcccCccccc
Confidence            357999999999999998654

>PRK07774 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.5e-23  Score=155.91  Aligned_cols=173  Identities=22%  Similarity=0.217  Sum_probs=134.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC-CCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM-DRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~-~~~~~~   76 (181)
                      +|+++|++|++++|+.+..+...+++... .++.++.+|+++.+++.++++.  ..++++|+||||||..... +..+.+
T Consensus        25 ~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~  104 (250)
T PRK07774         25 ALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLIT  104 (250)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhh
Confidence            36789999999999987776666655332 3678899999999999999988  6668899999999986431 145667


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.+++.+++|+.                 .++||++||.+++.   +...|+++|++++.++++++.++...||+++
T Consensus       105 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~---~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~  181 (250)
T PRK07774        105 VPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL---YSNFYGLAKVGLNGLTQQLARELGGMNIRVN  181 (250)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC---CccccHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence            788999999999988                 36899999987653   4678999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      .++||.+.|++.....  .+.......+..  |..+.++|+
T Consensus       182 ~v~pg~~~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~  218 (250)
T PRK07774        182 AIAPGPIDTEATRTVT--PKEFVADMVKGI--PLSRMGTPE  218 (250)
T ss_pred             EEecCcccCccccccC--CHHHHHHHHhcC--CCCCCcCHH
Confidence            9999999999865432  222333333333  445555554

>PRK05854 short chain dehydrogenase; Provisional

Probab=99.91  E-value=6.6e-24  Score=162.93  Aligned_cols=150  Identities=15%  Similarity=0.087  Sum_probs=125.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++..+++...   .++.++.+|+++.+++++++++  ..++++|+||||||....   ...
T Consensus        33 ~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~~iD~li~nAG~~~~---~~~  109 (313)
T PRK05854         33 RLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGRPIHLLINNAGVMTP---PER  109 (313)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCccccC---Ccc
Confidence            37889999999999998888777766432   3688999999999999999998  667899999999998643   233


Q ss_pred             cCCHHHHHHhhheeec----------------ceeEEEecccccccc------------CccchhhHhhHHHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF----------------LGVLLFTANLATETI------------GEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~l~~~l  127 (181)
                      +.+.++++..+++|+.                .++||++||.++..+            ++++..|+.||.++..|++.|
T Consensus       110 ~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l  189 (313)
T PRK05854        110 QTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAINWDDLNWERSYAGMRAYSQSKIAVGLFALEL  189 (313)
T ss_pred             ccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcCcccccccccCcchhhhHHHHHHHHHHHHHH
Confidence            5677889999999988                478999999876543            245678999999999999999


Q ss_pred             HHHh--cCCCeEEEEEecCcccCcccch
Q 042200          128 CVEL--GQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       128 a~~~--~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +.++  .++||+||+++||++.|++...
T Consensus       190 a~~~~~~~~gI~v~~v~PG~v~T~~~~~  217 (313)
T PRK05854        190 DRRSRAAGWGITSNLAHPGVAPTNLLAA  217 (313)
T ss_pred             HHHhhcCCCCeEEEEEecceeccCcccc
Confidence            8864  4678999999999999998644

>PRK09072 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.1e-23  Score=156.35  Aligned_cols=150  Identities=18%  Similarity=0.248  Sum_probs=132.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.+.+++...++....++.++.+|++|.+++..+++. ..++++|+||||||....  ..+.+.+.+
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~lv~~ag~~~~--~~~~~~~~~  102 (263)
T PRK09072         25 LAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINVLINNAGVNHF--ALLEDQDPE  102 (263)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCc--cccccCCHH
Confidence            67899999999999988887777663225788999999999999999988 557899999999998765  677788899


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      +++..+++|+.                 .++||++||..+..+.++...|+.+|+++..++++++.++.++||+++.++|
T Consensus       103 ~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~P  182 (263)
T PRK09072        103 AIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIGYPGYASYCASKFALRGFSEALRRELADTGVRVLYLAP  182 (263)
T ss_pred             HHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEec
Confidence            99999999987                 3789999999998888889999999999999999999999999999999999


Q ss_pred             CcccCcccch
Q 042200          144 IVSATPFFCN  153 (181)
Q Consensus       144 g~v~t~~~~~  153 (181)
                      |+++|++...
T Consensus       183 g~~~t~~~~~  192 (263)
T PRK09072        183 RATRTAMNSE  192 (263)
T ss_pred             Ccccccchhh
Confidence            9999987543

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=1.3e-23  Score=157.17  Aligned_cols=152  Identities=23%  Similarity=0.292  Sum_probs=131.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+..++..+++... .++.++.+|+++.+++.++++.  .+++++|+||||||....  ..+.+.
T Consensus        26 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~  103 (262)
T PRK13394         26 ELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVDILVSNAGIQIV--NPIENY  103 (262)
T ss_pred             HHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC--CchhhC
Confidence            36789999999999998887777766443 4688899999999999999988  567889999999998765  666677


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.+.++..+++|+.                  .++||++||..+..+.+....|+++|++++.+++.++.++.+.+|+++
T Consensus       104 ~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~  183 (262)
T PRK13394        104 SFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEASPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSH  183 (262)
T ss_pred             CHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            88889999988886                  468999999988888888889999999999999999999998999999


Q ss_pred             EEecCcccCcccchh
Q 042200          140 SIAHIVSATPFFCNA  154 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~  154 (181)
                      +|+||.+.|++....
T Consensus       184 ~v~pg~v~~~~~~~~  198 (262)
T PRK13394        184 VVCPGFVRTPLVDKQ  198 (262)
T ss_pred             EEeeCcccchhhhhh
Confidence            999999999975443

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=99.91  E-value=7.3e-24  Score=148.12  Aligned_cols=146  Identities=17%  Similarity=0.197  Sum_probs=130.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|.+.|-.||+++|+++.+++..++...   ++...||+.|.++++.++++  .+++.++++|||||+....+-.-.+..
T Consensus        24 ~f~elgN~VIi~gR~e~~L~e~~~~~p~---~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~  100 (245)
T COG3967          24 RFLELGNTVIICGRNEERLAEAKAENPE---IHTEVCDVADRDSRRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDL  100 (245)
T ss_pred             HHHHhCCEEEEecCcHHHHHHHHhcCcc---hheeeecccchhhHHHHHHHHHhhCCchheeeecccccchhhccCCcch
Confidence            3678899999999999999999888774   88899999999999999999  788999999999999876311123455


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++.+..+++|+.                 .+.||++||..++.+....+.||++|+|+..|+.+|+.+++..+|.|.-+
T Consensus       101 ~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvPm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~  180 (245)
T COG3967         101 LDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVPMASTPVYCATKAAIHSYTLALREQLKDTSVEVIEL  180 (245)
T ss_pred             hhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCcccccccchhhHHHHHHHHHHHHHHhhhcceEEEEe
Confidence            6778889999998                 67899999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCc
Q 042200          142 AHIVSATP  149 (181)
Q Consensus       142 ~Pg~v~t~  149 (181)
                      .|.+|+|+
T Consensus       181 ~PP~V~t~  188 (245)
T COG3967         181 APPLVDTT  188 (245)
T ss_pred             cCCceecC
Confidence            99999996

>PRK06924 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.6e-23  Score=154.71  Aligned_cols=176  Identities=11%  Similarity=0.169  Sum_probs=134.4

Q ss_pred             CcccCCCEEEEeecch-HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCC--c--cEEEEcccccCCCCCC
Q 042200            1 VFIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGK--L--DIMFNNAGIISNMDRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~--i--d~vi~~ag~~~~~~~~   73 (181)
                      +|+++|++|++++|+. +.+++......  .++.++.+|+++.+++++++++  ..++.  +  .++|||||..... .+
T Consensus        20 ~l~~~g~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~-~~   96 (251)
T PRK06924         20 QLLEKGTHVISISRTENKELTKLAEQYN--SNLTFHSLDLQDVHELETNFNEILSSIQEDNVSSIHLINNAGMVAPI-KP   96 (251)
T ss_pred             HHHhcCCEEEEEeCCchHHHHHHHhccC--CceEEEEecCCCHHHHHHHHHHHHHhcCcccCCceEEEEcceecccC-cc
Confidence            3678999999999986 44444433332  3688999999999999999988  33332  2  2899999986442 56


Q ss_pred             cccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--C
Q 042200           74 TLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--Q  133 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~  133 (181)
                      +.+.+.++|...+++|+.                  .++||++||..+..+.+++..|+++|++++.|++.++.+++  +
T Consensus        97 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~  176 (251)
T PRK06924         97 IEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAKNPYFGWSAYCSSKAGLDMFTQTVATEQEEEE  176 (251)
T ss_pred             cccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhcCCCCCcHHHhHHHHHHHHHHHHHHHHhhhcC
Confidence            778899999999999987                  25899999999988999999999999999999999999975  4


Q ss_pred             CCeEEEEEecCcccCcccchhcCC---ChHHHHHHHHHhhcccccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAMGI---DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .+|+|++|+||+++|++.......   .....+.+....  +.+++.+|+|
T Consensus       177 ~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  225 (251)
T PRK06924        177 YPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLK--EEGKLLSPEY  225 (251)
T ss_pred             CCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHh--hcCCcCCHHH
Confidence            689999999999999986543211   111233334433  5677777764

>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.2e-23  Score=156.83  Aligned_cols=152  Identities=18%  Similarity=0.202  Sum_probs=127.0

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+. +...+..+.+... .++.++.+|+++.+++.+++++  ..++++|++|||||........+.+.
T Consensus        22 L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~  101 (256)
T PRK12745         22 LAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDL  101 (256)
T ss_pred             HHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhC
Confidence            678999999999864 4444444444322 4688999999999999999998  66788999999999864422456778


Q ss_pred             CHHHHHHhhheeec-----------------c------eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           78 DNEKVKRVMIMVVF-----------------L------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +.++|+..+++|+.                 .      ++||++||..+..+.++...|+.+|+++++++++++.++.++
T Consensus       102 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~  181 (256)
T PRK12745        102 TPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVSPNRGEYCISKAGLSMAAQLFAARLAEE  181 (256)
T ss_pred             CHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHh
Confidence            88999999999998                 1      359999999998888888999999999999999999999989


Q ss_pred             CeEEEEEecCcccCcccch
Q 042200          135 DIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ||+++.|+||.+.|++...
T Consensus       182 gi~v~~i~pg~v~t~~~~~  200 (256)
T PRK12745        182 GIGVYEVRPGLIKTDMTAP  200 (256)
T ss_pred             CCEEEEEecCCCcCccccc
Confidence            9999999999999987644

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=99.91  E-value=2e-23  Score=155.68  Aligned_cols=151  Identities=25%  Similarity=0.327  Sum_probs=132.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.++++....++... .++.++.||+++.+++..++++  ..++++|+||||||....  ..+.+.
T Consensus        23 ~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~  100 (258)
T PRK12429         23 ALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVDILVNNAGIQHV--APIEDF  100 (258)
T ss_pred             HHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            36789999999999988887776665432 4788999999999999999998  566789999999998766  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..+++|+.                 .++||++||..+..+.+++..|+++|++++.+++.++.++.+.+|++++
T Consensus       101 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~  180 (258)
T PRK12429        101 PTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVGSAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNA  180 (258)
T ss_pred             CHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccCCCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            88999999998877                 4789999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccch
Q 042200          141 IAHIVSATPFFCN  153 (181)
Q Consensus       141 i~Pg~v~t~~~~~  153 (181)
                      ++||++.|++...
T Consensus       181 ~~pg~v~~~~~~~  193 (258)
T PRK12429        181 ICPGYVDTPLVRK  193 (258)
T ss_pred             EecCCCcchhhhh
Confidence            9999999997643

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.91  E-value=4.9e-24  Score=149.87  Aligned_cols=146  Identities=23%  Similarity=0.192  Sum_probs=132.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh---cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF---TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~---~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |++.|+.|+.+.|.-+...++..+.    +...++.|+++++++..+..+   ..+|++|.++||||..-.  .+..+.+
T Consensus        28 f~~~G~~V~AtaR~~e~M~~L~~~~----gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~NNAG~~C~--~Pa~d~~  101 (289)
T KOG1209|consen   28 FARNGYLVYATARRLEPMAQLAIQF----GLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLYNNAGQSCT--FPALDAT  101 (289)
T ss_pred             HHhCCeEEEEEccccchHhhHHHhh----CCeeEEeccCChHHHHHHHHHHhhCCCCceEEEEcCCCCCcc--cccccCC
Confidence            6799999999999987777664433    588899999999999999999   477999999999997655  7788899


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .+..++.+++|++                +|.||++.|+.+..+.|-.+.|.+||+|+.++++.|+.|++++||+|..+-
T Consensus       102 i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpfpf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~i  181 (289)
T KOG1209|consen  102 IAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPFPFGSIYSASKAAIHAYARTLRLELKPFGVRVINAI  181 (289)
T ss_pred             HHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEeccchhhhhhHHHHHHHHhhhhcEEeeeccccEEEEec
Confidence            9999999999999                899999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccch
Q 042200          143 HIVSATPFFCN  153 (181)
Q Consensus       143 Pg~v~t~~~~~  153 (181)
                      ||.|.|.+...
T Consensus       182 tGGv~T~Ia~k  192 (289)
T KOG1209|consen  182 TGGVATDIADK  192 (289)
T ss_pred             ccceecccccC
Confidence            99999987654

>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]

Probab=99.91  E-value=5.4e-24  Score=157.71  Aligned_cols=153  Identities=16%  Similarity=0.139  Sum_probs=136.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|.+|++++|++++++.+.+++...  .++.++.+|+++.+.+-.-+.+ -....+-++|||+|.....|.++.+.
T Consensus        68 eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~  147 (312)
T KOG1014|consen   68 ELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKY  147 (312)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEEEEecccccCCCcHHHHhC
Confidence            48999999999999999999999998765  5799999999998874444444 22246899999999988655888889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.+++++++|+.                 +|.|++++|.+++.+.|.+..|+++|+.++.|+++|+.||..+||.|.+
T Consensus       148 ~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~  227 (312)
T KOG1014|consen  148 PEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIPTPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQS  227 (312)
T ss_pred             chhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEeccccccccChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEE
Confidence            98899999999999                 7899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccch
Q 042200          141 IAHIVSATPFFCN  153 (181)
Q Consensus       141 i~Pg~v~t~~~~~  153 (181)
                      +.|++|.|.|.+.
T Consensus       228 v~p~~VaTkm~~~  240 (312)
T KOG1014|consen  228 VIPYLVATKMAKY  240 (312)
T ss_pred             eehhheecccccc
Confidence            9999999998654

>PRK07060 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3e-23  Score=153.75  Aligned_cols=169  Identities=28%  Similarity=0.281  Sum_probs=137.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+++++.....    .+.++.+|+++.+++.++++.  .+++|+||||||....  ....+.+.++
T Consensus        29 l~~~g~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~--~~~~d~vi~~ag~~~~--~~~~~~~~~~  100 (245)
T PRK07060         29 LAQRGARVVAAARNAAALDRLAGET----GCEPLRLDVGDDAAIRAALAA--AGAFDGLVNCAGIASL--ESALDMTAEG  100 (245)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHh----CCeEEEecCCCHHHHHHHHHH--hCCCCEEEECCCCCCC--CChhhCCHHH
Confidence            6788999999999988777665544    355788999999999888874  4679999999998765  6666788889


Q ss_pred             HHHhhheeec----------------c--eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           82 VKRVMIMVVF----------------L--GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        82 ~~~~~~~n~~----------------~--~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      +++.+.+|+.                .  ++||++||..+..+.+....|+.+|++++.+++.++.++.+.||++++++|
T Consensus       101 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~p  180 (245)
T PRK07060        101 FDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGLPDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNP  180 (245)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCCCCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEee
Confidence            9999988888                1  789999999998888899999999999999999999999989999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |.+.|++....+. .+...+.+....  |.+++.+|+|
T Consensus       181 g~v~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  215 (245)
T PRK07060        181 TVTLTPMAAEAWS-DPQKSGPMLAAI--PLGRFAEVDD  215 (245)
T ss_pred             CCCCCchhhhhcc-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999997544332 333344444444  6677776654

>PRK06181 short chain dehydrogenase; Provisional

Probab=99.91  E-value=1.4e-23  Score=157.14  Aligned_cols=151  Identities=23%  Similarity=0.262  Sum_probs=131.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC-
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT-   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~-   77 (181)
                      |+++|++|++++|+.++.++..+.+... .++.++.+|+++.+++..++++  .+++++|+||||||....  ..+.+. 
T Consensus        21 l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~   98 (263)
T PRK06181         21 LARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDILVNNAGITMW--SRFDELT   98 (263)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccc--cchhccC
Confidence            6788999999999988777766655433 4788899999999999999998  667889999999998765  666667 


Q ss_pred             CHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.+.+...+++|+.                .+++|++||..+..+.+++..|+.+|++++.++++++.++.+++++++++
T Consensus        99 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i  178 (263)
T PRK06181         99 DLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTGVPTRSGYAASKHALHGFFDSLRIELADDGVAVTVV  178 (263)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEE
Confidence            78889999999888                47899999998888888899999999999999999999999999999999


Q ss_pred             ecCcccCcccchh
Q 042200          142 AHIVSATPFFCNA  154 (181)
Q Consensus       142 ~Pg~v~t~~~~~~  154 (181)
                      +||.+.|++....
T Consensus       179 ~pg~v~t~~~~~~  191 (263)
T PRK06181        179 CPGFVATDIRKRA  191 (263)
T ss_pred             ecCccccCcchhh
Confidence            9999999986544

>PRK09186 flagellin modification protein A; Provisional

Probab=99.91  E-value=4.2e-23  Score=153.93  Aligned_cols=149  Identities=17%  Similarity=0.194  Sum_probs=122.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC-CCCCcc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN-MDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~-~~~~~~   75 (181)
                      |+++|++|++++|+.+++++..+++...   ..+.++.||++|.+++.++++.  ..++++|+||||||.... ....+.
T Consensus        24 l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~  103 (256)
T PRK09186         24 ILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFF  103 (256)
T ss_pred             HHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCCccEEEECCccccccccCccc
Confidence            6789999999999988887777666321   3466779999999999999998  667889999999986432 114667


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccC----------ccchhhHhhHHHHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIG----------EALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~----------~~~~~y~~sK~a~~~l~~~la  128 (181)
                      +.+.+.++..+++|+.                 .++||++||..+..+.          .....|+++|+++++|+++++
T Consensus       104 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la  183 (256)
T PRK09186        104 DVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVVAPKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLA  183 (256)
T ss_pred             cCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhccccchhccccccCCcchhHHHHHHHHHHHHHHH
Confidence            7888999999999986                 4789999998765421          122369999999999999999


Q ss_pred             HHhcCCCeEEEEEecCcccCcc
Q 042200          129 VELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       129 ~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .++.++||+++.|+||.+.++.
T Consensus       184 ~e~~~~~i~v~~i~Pg~~~~~~  205 (256)
T PRK09186        184 KYFKDSNIRVNCVSPGGILDNQ  205 (256)
T ss_pred             HHhCcCCeEEEEEecccccCCC
Confidence            9999999999999999988764

>PRK05884 short chain dehydrogenase; Provisional

Probab=99.91  E-value=2.9e-23  Score=152.21  Aligned_cols=140  Identities=16%  Similarity=0.135  Sum_probs=115.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCC--CC--CCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISN--MD--RTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~--~~--~~~~~   76 (181)
                      |+++|++|++++|+.+++++..+++    .+.++.+|+++.+++.++++. .  .++|++|||||....  .+  ..+.+
T Consensus        20 l~~~g~~v~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~v~~~~~~~~--~~id~lv~~ag~~~~~~~~~~~~~~~   93 (223)
T PRK05884         20 FRNDGHKVTLVGARRDDLEVAAKEL----DVDAIVCDNTDPASLEEARGLFP--HHLDTIVNVPAPSWDAGDPRTYSLAD   93 (223)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHhc----cCcEEecCCCCHHHHHHHHHHHh--hcCcEEEECCCccccCCCCcccchhc
Confidence            6789999999999988887766654    356789999999999999886 3  268999999985321  00  12333


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                       +.++|++.+++|+.               .|+||++||.+    .+....|+++|+++.+|+++++.+++++||+||+|
T Consensus        94 -~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v  168 (223)
T PRK05884         94 -TANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPEN----PPAGSAEAAIKAALSNWTAGQAAVFGTRGITINAV  168 (223)
T ss_pred             -CHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCC----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence             46889999999998               58999999865    35568899999999999999999999999999999


Q ss_pred             ecCcccCcccc
Q 042200          142 AHIVSATPFFC  152 (181)
Q Consensus       142 ~Pg~v~t~~~~  152 (181)
                      +||+++|++..
T Consensus       169 ~PG~v~t~~~~  179 (223)
T PRK05884        169 ACGRSVQPGYD  179 (223)
T ss_pred             ecCccCchhhh
Confidence            99999999754

>COG0623 FabI Enoyl-[acyl-carrier-protein]

Probab=99.91  E-value=1.7e-23  Score=148.55  Aligned_cols=176  Identities=20%  Similarity=0.197  Sum_probs=145.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC--CCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN--MDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~--~~~~~~~   76 (181)
                      |.++|+++++++.++ ++++.++++... +....++||+++.+++..+|++  +++|++|+|||+-|....  ..+.+.+
T Consensus        28 l~~~GAeL~fTy~~e-~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~d  106 (259)
T COG0623          28 LAEQGAELAFTYQGE-RLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLD  106 (259)
T ss_pred             HHHcCCEEEEEeccH-HHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccc
Confidence            678999999999876 555555555433 4577899999999999999999  888999999999998764  2367778


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.+.|...+++..+               +|.|+.+|-..+.+..|.+..-+.+|+++++-+|-|+.+++++|||||.|
T Consensus       107 tsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~r~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaI  186 (259)
T COG0623         107 TSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSERVVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAI  186 (259)
T ss_pred             cCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccceeecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeee
Confidence            899999999998888               78999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +-|.|+|-.....-. ....++...+..  |++|.-|+||
T Consensus       187 SAGPIrTLAasgI~~-f~~~l~~~e~~a--Pl~r~vt~ee  223 (259)
T COG0623         187 SAGPIRTLAASGIGD-FRKMLKENEANA--PLRRNVTIEE  223 (259)
T ss_pred             cccchHHHHhhcccc-HHHHHHHHHhhC--CccCCCCHHH
Confidence            999999975544432 223334433344  8999988875

>PRK07023 short chain dehydrogenase; Provisional

Probab=99.91  E-value=3.1e-23  Score=153.68  Aligned_cols=173  Identities=15%  Similarity=0.109  Sum_probs=132.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh---ccc---CCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF---TKF---GKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~---~~~---~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|+....  ......  .++.++.+|+++.+++++++.+   ..+   +++|++|||||..... .++
T Consensus        20 ~l~~~G~~v~~~~r~~~~~--~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~-~~~   94 (243)
T PRK07023         20 QLLQPGIAVLGVARSRHPS--LAAAAG--ERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVLLINNAGTVEPI-GPL   94 (243)
T ss_pred             HHHhCCCEEEEEecCcchh--hhhccC--CeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceEEEEcCcccCCC-Ccc
Confidence            3678999999999976532  112122  3688999999999999996654   222   4799999999986542 456


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.+.++++..+++|+.                 .++||++||..+..+.+++..|+++|++++++++.++.+ .+.||+
T Consensus        95 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~-~~~~i~  173 (243)
T PRK07023         95 ATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARNAYAGWSVYCATKAALDHHARAVALD-ANRALR  173 (243)
T ss_pred             ccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcCCCCCchHHHHHHHHHHHHHHHHHhc-CCCCcE
Confidence            67788999999999998                 469999999999999999999999999999999999999 778999


Q ss_pred             EEEEecCcccCcccchhcCCC---hHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGID---KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++|+||+++|++........   ....+.+....  |.++..+|+|
T Consensus       174 v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~  218 (243)
T PRK07023        174 IVSLAPGVVDTGMQATIRATDEERFPMRERFRELK--ASGALSTPED  218 (243)
T ss_pred             EEEecCCccccHHHHHHHhcccccchHHHHHHHhh--hcCCCCCHHH
Confidence            999999999999865432111   11222333333  5677777754

>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=1.3e-23  Score=154.84  Aligned_cols=164  Identities=21%  Similarity=0.261  Sum_probs=128.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+....      ..  .++.++.+|+++.  +.++++  .++++|+||||||..... ..+.+.+.++
T Consensus        25 l~~~G~~v~~~~r~~~~~------~~--~~~~~~~~D~~~~--~~~~~~--~~~~id~lv~~ag~~~~~-~~~~~~~~~~   91 (235)
T PRK06550         25 FLAQGAQVYGVDKQDKPD------LS--GNFHFLQLDLSDD--LEPLFD--WVPSVDILCNTAGILDDY-KPLLDTSLEE   91 (235)
T ss_pred             HHHCCCEEEEEeCCcccc------cC--CcEEEEECChHHH--HHHHHH--hhCCCCEEEECCCCCCCC-CCcccCCHHH
Confidence            678999999999975321      12  2688899999987  555554  457899999999975431 4566788899


Q ss_pred             HHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           82 VKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        82 ~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      |+..+++|+.                 .++||++||..+..+.+.+..|+.+|++++.++++++.++.++||++++|+||
T Consensus        92 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg  171 (235)
T PRK06550         92 WQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAGGGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPG  171 (235)
T ss_pred             HHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            9999999987                 36899999999998888899999999999999999999999999999999999


Q ss_pred             cccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          145 VSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       145 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .++|++....+. ++...+.+.+..  |++|+.+|+|
T Consensus       172 ~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~  205 (235)
T PRK06550        172 AVKTPMTAADFE-PGGLADWVARET--PIKRWAEPEE  205 (235)
T ss_pred             CccCcccccccC-chHHHHHHhccC--CcCCCCCHHH
Confidence            999998654332 222222333344  7788888764

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.91  E-value=3e-23  Score=153.35  Aligned_cols=150  Identities=21%  Similarity=0.306  Sum_probs=131.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|+++.+++..++++  .+++++|+||||+|....  ..+.+.
T Consensus        26 ~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  103 (239)
T PRK07666         26 ALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSIDILINNAGISKF--GKFLEL  103 (239)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCccEEEEcCccccC--CCcccC
Confidence            36789999999999988777665555332 4788999999999999999998  667899999999998765  667778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .+++|++||..+..+.++...|+.+|+++..++++++.++.++||+++.
T Consensus       104 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~  183 (239)
T PRK07666        104 DPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGAAVTSAYSASKFGVLGLTESLMQEVRKHNIRVTA  183 (239)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCCCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEE
Confidence            88999999999887                 4689999999999898889999999999999999999999999999999


Q ss_pred             EecCcccCcccc
Q 042200          141 IAHIVSATPFFC  152 (181)
Q Consensus       141 i~Pg~v~t~~~~  152 (181)
                      |+||.+.|++..
T Consensus       184 v~pg~v~t~~~~  195 (239)
T PRK07666        184 LTPSTVATDMAV  195 (239)
T ss_pred             EecCcccCcchh
Confidence            999999999754

>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase

Probab=99.91  E-value=2.4e-23  Score=173.68  Aligned_cols=146  Identities=25%  Similarity=0.297  Sum_probs=128.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+.++...+.+...   ..+..+.+|+++.+++.+++++  .+++++|+||||||....  ..+.
T Consensus       433 ~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~iDilV~nAG~~~~--~~~~  510 (676)
T TIGR02632       433 RLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGGVDIVVNNAGIATS--SPFE  510 (676)
T ss_pred             HHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCC--CCcc
Confidence            36789999999999988877766655421   3578899999999999999998  678899999999998765  6777


Q ss_pred             cCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           76 DTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +.+.++|+..+++|+.                  .++||++||..+..+.++...|+++|+++++++++++.+++++||+
T Consensus       511 ~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~~~~~aY~aSKaA~~~l~r~lA~el~~~gIr  590 (676)
T TIGR02632       511 ETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAGKNASAYSAAKAAEAHLARCLAAEGGTYGIR  590 (676)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            8889999999998876                  3589999999999998999999999999999999999999999999


Q ss_pred             EEEEecCcccC
Q 042200          138 VNSIAHIVSAT  148 (181)
Q Consensus       138 v~~i~Pg~v~t  148 (181)
                      ||+|+||.+.+
T Consensus       591 Vn~V~Pg~V~~  601 (676)
T TIGR02632       591 VNTVNPDAVLQ  601 (676)
T ss_pred             EEEEECCceec
Confidence            99999999864

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=99.91  E-value=7.7e-23  Score=157.08  Aligned_cols=152  Identities=13%  Similarity=0.029  Sum_probs=124.0

Q ss_pred             CcccCC-CEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHR-AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++| ++|++++|+.+++++..+++... ..+.++.+|+++.+++++++++  ..++++|++|||||+.... ....+
T Consensus        22 ~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~lI~nAG~~~~~-~~~~~  100 (314)
T TIGR01289        22 ALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPLDALVCNAAVYFPT-AKEPR  100 (314)
T ss_pred             HHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCccccC-ccccc
Confidence            367899 99999999998888777776432 4678899999999999999998  5578899999999975431 23345


Q ss_pred             CCHHHHHHhhheeec---------------c----eeEEEecccccccc-------------------------------
Q 042200           77 TDNEKVKRVMIMVVF---------------L----GVLLFTANLATETI-------------------------------  106 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~----~~iv~iss~~~~~~-------------------------------  106 (181)
                      .+.++|+.++++|+.               .    ++||++||.++...                               
T Consensus       101 ~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (314)
T TIGR01289       101 FTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTNTLAGNVPPKANLGDLSGLAAGFKAPIAMIDG  180 (314)
T ss_pred             cCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccccCCCcCCCcccccccccccccCCCcccccCC
Confidence            688999999999998               1    69999999876421                               


Q ss_pred             --CccchhhHhhHHHHHHHHHHHHHHhc-CCCeEEEEEecCcc-cCcccch
Q 042200          107 --GEALYDYLMSKYAVLGLMKNLCVELG-QYDIRVNSIAHIVS-ATPFFCN  153 (181)
Q Consensus       107 --~~~~~~y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~Pg~v-~t~~~~~  153 (181)
                        ..++..|++||+++..+++.|++++. ++||+|++|+||.+ .|++.+.
T Consensus       181 ~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~  231 (314)
T TIGR01289       181 KEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFRE  231 (314)
T ss_pred             CCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccccc
Confidence              13457799999999999999999985 46999999999999 6988653

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=99.91  E-value=8.4e-23  Score=151.88  Aligned_cols=145  Identities=18%  Similarity=0.173  Sum_probs=126.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++++.....+..  ++.++.+|+++.+++..++++  ..++++|+||||||..... .++.+.+.
T Consensus        20 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~-~~~~~~~~   96 (248)
T PRK10538         20 FIQQGHKVIATGRRQERLQELKDELGD--NLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNNAGLALGL-EPAHKASV   96 (248)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHhcc--ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccCCC-CCcccCCH
Confidence            678999999999998888776665544  688999999999999999988  6678899999999975321 45667788


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .++||++||..+..+.++...|+.+|++++.+++.++.++.++||++++|+
T Consensus        97 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~  176 (248)
T PRK10538         97 EDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE  176 (248)
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCCCCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEe
Confidence            999999999877                 378999999988888888899999999999999999999999999999999


Q ss_pred             cCcccCc
Q 042200          143 HIVSATP  149 (181)
Q Consensus       143 Pg~v~t~  149 (181)
                      ||++.|+
T Consensus       177 pg~i~~~  183 (248)
T PRK10538        177 PGLVGGT  183 (248)
T ss_pred             CCeeccc
Confidence            9999844

>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional

Probab=99.91  E-value=4.5e-23  Score=152.89  Aligned_cols=175  Identities=17%  Similarity=0.145  Sum_probs=134.8

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++ .|+.+..++...++... .++..+.+|++|.+++++++++  .+++++|+||||+|..... .++.+
T Consensus        20 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id~vi~~ag~~~~~-~~~~~   98 (247)
T PRK09730         20 LLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLAALVNNAGILFTQ-CTVEN   98 (247)
T ss_pred             HHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCC-Ccccc
Confidence            367899998774 67777666665554332 3688899999999999999998  5678999999999975332 56677


Q ss_pred             CCHHHHHHhhheeec--------------------ceeEEEeccccccccCcc-chhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           77 TDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .+.++|+..+++|+.                    .|++|++||..+..+.+. +..|+++|++++.+++.++.++.++|
T Consensus        99 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~  178 (247)
T PRK09730         99 LTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGAPGEYVDYAASKGAIDTLTTGLSLEVAAQG  178 (247)
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCCCCcccchHhHHHHHHHHHHHHHHHHHHhC
Confidence            888999999999988                    156999999888887775 46899999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      |++++++||.+.|++.....  .+...+......  |+++.++|+
T Consensus       179 i~v~~i~pg~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~  219 (247)
T PRK09730        179 IRVNCVRPGFIYTEMHASGG--EPGRVDRVKSNI--PMQRGGQPE  219 (247)
T ss_pred             eEEEEEEeCCCcCcccccCC--CHHHHHHHHhcC--CCCCCcCHH
Confidence            99999999999999743321  223333333333  556655554

>PRK07904 short chain dehydrogenase; Provisional

Probab=99.90  E-value=2.5e-23  Score=155.24  Aligned_cols=151  Identities=17%  Similarity=0.244  Sum_probs=122.9

Q ss_pred             cccCC-CEEEEeecchHH-HHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHR-AKVIIADVQDDL-CRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~-~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++| ++|++++|+.+. +++..+++...  .++.++.+|++|.+++.+++++ .+++++|++|||+|....  .....
T Consensus        28 l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g~id~li~~ag~~~~--~~~~~  105 (253)
T PRK07904         28 YLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGGDVDVAIVAFGLLGD--AEELW  105 (253)
T ss_pred             HHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcCCCCEEEEeeecCCc--hhhcc
Confidence            56775 899999999875 77666666442  3689999999999999999888 445789999999998654  22112


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++..+.+++|+.                 .++||++||..+..+.++...|++||+++.+|+++++.++.++||+++
T Consensus       106 ~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~  185 (253)
T PRK07904        106 QNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERVRRSNFVYGSTKAGLDGFYLGLGEALREYGVRVL  185 (253)
T ss_pred             cCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEE
Confidence            234455567787776                 579999999988877788889999999999999999999999999999


Q ss_pred             EEecCcccCcccchh
Q 042200          140 SIAHIVSATPFFCNA  154 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~  154 (181)
                      .|+||++.|++....
T Consensus       186 ~v~Pg~v~t~~~~~~  200 (253)
T PRK07904        186 VVRPGQVRTRMSAHA  200 (253)
T ss_pred             EEeeCceecchhccC
Confidence            999999999987654

>PRK08251 short chain dehydrogenase; Provisional

Probab=99.90  E-value=5.2e-23  Score=152.81  Aligned_cols=151  Identities=19%  Similarity=0.133  Sum_probs=129.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++....+...   .++.++.+|+++.+++.+++++  .+++++|++|||||+...  ..+.
T Consensus        21 ~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~   98 (248)
T PRK08251         21 EFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGGLDRVIVNAGIGKG--ARLG   98 (248)
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcC
Confidence            36789999999999988877766554321   4788999999999999999998  667899999999998766  6666


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCcc-chhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +.+.+.++..+++|+.                 .++||++||..+..+.+. ...|+.+|++++.+++.++.++...+|+
T Consensus        99 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~  178 (248)
T PRK08251         99 TGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRGLPGVKAAYAASKAGVASLGEGLRAELAKTPIK  178 (248)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccCCCCCcccHHHHHHHHHHHHHHHHHHhcccCcE
Confidence            7778888888888888                 468999999988888774 6889999999999999999999988999


Q ss_pred             EEEEecCcccCcccch
Q 042200          138 VNSIAHIVSATPFFCN  153 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~  153 (181)
                      ++.|+||+++|++.+.
T Consensus       179 v~~v~pg~v~t~~~~~  194 (248)
T PRK08251        179 VSTIEPGYIRSEMNAK  194 (248)
T ss_pred             EEEEecCcCcchhhhc
Confidence            9999999999997654

>PRK06482 short chain dehydrogenase; Provisional

Probab=99.90  E-value=8.6e-23  Score=154.04  Aligned_cols=149  Identities=15%  Similarity=0.212  Sum_probs=130.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.++........  ++.++.+|++|.+++.+++++  ..++++|+||||||....  ....+.+
T Consensus        21 ~L~~~g~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~   96 (276)
T PRK06482         21 RLLARGDRVAATVRRPDALDDLKARYGD--RLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVSNAGYGLF--GAAEELS   96 (276)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHhccC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--cccccCC
Confidence            3678999999999998877776655544  688999999999999999987  567889999999998766  6667778


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..+++|+.                 .++||++||..+..+.++...|+.+|++++.|+++++.+++++||+++.+
T Consensus        97 ~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v  176 (276)
T PRK06482         97 DAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIAYPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIV  176 (276)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccCCCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEE
Confidence            8899999999987                 36899999998888888899999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.+.|++...
T Consensus       177 ~pg~~~t~~~~~  188 (276)
T PRK06482        177 EPGPARTNFGAG  188 (276)
T ss_pred             eCCccccCCccc
Confidence            999999987543

>PRK07775 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1e-22  Score=153.64  Aligned_cols=150  Identities=15%  Similarity=0.157  Sum_probs=128.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++....+... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+.+.
T Consensus        29 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~--~~~~~~  106 (274)
T PRK07775         29 ELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIEVLVSGAGDTYF--GKLHEI  106 (274)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--cccccC
Confidence            36789999999999887777665555332 4688899999999999999998  556889999999998765  666677


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++..+++|+.                 .++||++||..+..+.+....|+.+|++++.++++++.++.+.||++++
T Consensus       107 ~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~  186 (274)
T PRK07775        107 STEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQRPHMGAYGAAKAGLEAMVTNLQMELEGTGVRASI  186 (274)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            88899999999888                 3579999999888888888899999999999999999999988999999


Q ss_pred             EecCcccCcccc
Q 042200          141 IAHIVSATPFFC  152 (181)
Q Consensus       141 i~Pg~v~t~~~~  152 (181)
                      |+||.++|++..
T Consensus       187 v~pG~~~t~~~~  198 (274)
T PRK07775        187 VHPGPTLTGMGW  198 (274)
T ss_pred             EeCCcccCcccc
Confidence            999999998643

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=5.5e-23  Score=164.95  Aligned_cols=147  Identities=20%  Similarity=0.295  Sum_probs=127.6

Q ss_pred             cccCCCEEEEeecc--hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQ--DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~--~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|.  .+.+.+...++.    ..++.+|+++.+++.++++.  ..++++|+||||||....  ..+.+.
T Consensus       230 l~~~Ga~vi~~~~~~~~~~l~~~~~~~~----~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~vi~~AG~~~~--~~~~~~  303 (450)
T PRK08261        230 LARDGAHVVCLDVPAAGEALAAVANRVG----GTALALDITAPDAPARIAEHLAERHGGLDIVVHNAGITRD--KTLANM  303 (450)
T ss_pred             HHHCCCEEEEEeCCccHHHHHHHHHHcC----CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhC
Confidence            67899999999884  344555544442    35789999999999999998  567889999999998876  778888


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.|+..+++|+.                 .++||++||.++..+.+++..|+++|+++++|+++++.++.++||++|+
T Consensus       304 ~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~  383 (450)
T PRK08261        304 DEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGNRGQTNYAASKAGVIGLVQALAPLLAERGITINA  383 (450)
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEE
Confidence            99999999999988                 2799999999998888999999999999999999999999999999999


Q ss_pred             EecCcccCcccchh
Q 042200          141 IAHIVSATPFFCNA  154 (181)
Q Consensus       141 i~Pg~v~t~~~~~~  154 (181)
                      |+||+++|+++..+
T Consensus       384 v~PG~i~t~~~~~~  397 (450)
T PRK08261        384 VAPGFIETQMTAAI  397 (450)
T ss_pred             EEeCcCcchhhhcc
Confidence            99999999987654

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=7.3e-23  Score=151.67  Aligned_cols=152  Identities=30%  Similarity=0.353  Sum_probs=131.0

Q ss_pred             cccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++ +|+.+..+.....+... .++.++.+|+++.+++.++++.  ..++++|+|||++|....  ..+.+.
T Consensus        25 l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  102 (247)
T PRK05565         25 LAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKIDILVNNAGISNF--GLVTDM  102 (247)
T ss_pred             HHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCC--CChhhC
Confidence            67889999998 99887776665554332 4688999999999999999988  567889999999998754  667778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..+++|+.                 .+++|++||..+..+.+....|+.+|++++.++++++.++...|+++++
T Consensus       103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~  182 (247)
T PRK05565        103 TDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGASCEVLYSASKGAVNAFTKALAKELAPSGIRVNA  182 (247)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            88999999999888                 3579999999888888889999999999999999999999989999999


Q ss_pred             EecCcccCcccchhc
Q 042200          141 IAHIVSATPFFCNAM  155 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~  155 (181)
                      ++||.++|++.+...
T Consensus       183 v~pg~v~t~~~~~~~  197 (247)
T PRK05565        183 VAPGAIDTEMWSSFS  197 (247)
T ss_pred             EEECCccCccccccC
Confidence            999999999876543

>PRK09134 short chain dehydrogenase; Provisional

Probab=99.90  E-value=1.1e-22  Score=152.06  Aligned_cols=146  Identities=17%  Similarity=0.204  Sum_probs=122.0

Q ss_pred             cccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++++. .+.++...+++... .++.++.+|++|.+++.++++.  ..++++|+||||||....  ..+.+.
T Consensus        29 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~iD~vi~~ag~~~~--~~~~~~  106 (258)
T PRK09134         29 LAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGPITLLVNNASLFEY--DSAASF  106 (258)
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCC--CccccC
Confidence            67899999887764 45555555554322 4688999999999999999988  556889999999998765  667778


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .+++|+++|..++.+.+.+..|+++|++++.++++++.++.+. |++++
T Consensus       107 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~~p~~~~Y~~sK~a~~~~~~~la~~~~~~-i~v~~  185 (258)
T PRK09134        107 TRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNLNPDFLSYTLSKAALWTATRTLAQALAPR-IRVNA  185 (258)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcCC-cEEEE
Confidence            88999999999987                 4689999987777777778899999999999999999999875 99999


Q ss_pred             EecCcccCcc
Q 042200          141 IAHIVSATPF  150 (181)
Q Consensus       141 i~Pg~v~t~~  150 (181)
                      |+||++.|+.
T Consensus       186 i~PG~v~t~~  195 (258)
T PRK09134        186 IGPGPTLPSG  195 (258)
T ss_pred             eecccccCCc
Confidence            9999998864

>PRK08703 short chain dehydrogenase; Provisional

Probab=99.90  E-value=7e-23  Score=151.44  Aligned_cols=151  Identities=14%  Similarity=0.065  Sum_probs=126.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCC--hhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTI--DSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~--~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|++++|+.+.++...+++...  ..+.++.+|+++  .+++.+++++  ..+ +.+|+||||||..... .++
T Consensus        26 l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~-~~~  104 (239)
T PRK08703         26 YAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQGKLDGIVHCAGYFYAL-SPL  104 (239)
T ss_pred             HHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhCCCCCEEEEeccccccC-CCc
Confidence            6789999999999998887776665322  356788999986  5678888777  455 6899999999976432 466


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC-Ce
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY-DI  136 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~-~i  136 (181)
                      .+.+.++|+..+++|+.                 .+++++++|..+..+.+.+..|+++|++++.|+++++.++.++ +|
T Consensus       105 ~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i  184 (239)
T PRK08703        105 DFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGETPKAYWGGFGASKAALNYLCKVAADEWERFGNL  184 (239)
T ss_pred             cccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccccCCCCccchHHhHHHHHHHHHHHHHHhccCCCe
Confidence            77888999999999998                 4799999999888888888999999999999999999999887 69


Q ss_pred             EEEEEecCcccCcccch
Q 042200          137 RVNSIAHIVSATPFFCN  153 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~  153 (181)
                      +|++|+||++.|++...
T Consensus       185 ~v~~v~pG~v~t~~~~~  201 (239)
T PRK08703        185 RANVLVPGPINSPQRIK  201 (239)
T ss_pred             EEEEEecCcccCccccc
Confidence            99999999999997554

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.90  E-value=9.7e-23  Score=151.57  Aligned_cols=151  Identities=22%  Similarity=0.195  Sum_probs=125.6

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++..|+ .+........+... .++.++.+|+++.+++.+++++  ..++++|+||||||....  .++.+
T Consensus        25 ~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~  102 (252)
T PRK06077         25 RLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVADILVNNAGLGLF--SPFLN  102 (252)
T ss_pred             HHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhh
Confidence            367899998887753 44444433333322 3677899999999999999988  667899999999998665  66777


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.+.++..+++|+.               .+++|++||..+..+.+++..|+++|++++.++++++.++.+ +|+++.+
T Consensus       103 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~v~~v  181 (252)
T PRK06077        103 VDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRPAYGLSIYGAMKAAVINLTKYLALELAP-KIRVNAI  181 (252)
T ss_pred             CCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCCCCCchHHHHHHHHHHHHHHHHHHHHhc-CCEEEEE
Confidence            888889999999987               468999999999989999999999999999999999999988 8999999


Q ss_pred             ecCcccCcccchh
Q 042200          142 AHIVSATPFFCNA  154 (181)
Q Consensus       142 ~Pg~v~t~~~~~~  154 (181)
                      .||++.|++...+
T Consensus       182 ~Pg~i~t~~~~~~  194 (252)
T PRK06077        182 APGFVKTKLGESL  194 (252)
T ss_pred             eeCCccChHHHhh
Confidence            9999999976443

>PRK07577 short chain dehydrogenase; Provisional

Probab=99.90  E-value=6.7e-23  Score=150.92  Aligned_cols=164  Identities=18%  Similarity=0.146  Sum_probs=127.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.+.      ..    ...++.+|+++.+++.+++++ ....++|+||||+|....  .++.+.+.+
T Consensus        23 l~~~G~~v~~~~r~~~~------~~----~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~~   90 (234)
T PRK07577         23 LANLGHQVIGIARSAID------DF----PGELFACDLADIEQTAATLAQINEIHPVDAIVNNVGIALP--QPLGKIDLA   90 (234)
T ss_pred             HHHCCCEEEEEeCCccc------cc----CceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCCCCCC--CChHHCCHH
Confidence            67899999999998653      11    124689999999999999988 333468999999998766  677778889


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++++.+++|+.                 .++||++||.. ..+.+....|+++|+++++|+++++.++.++||++++|+|
T Consensus        91 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~-~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~p  169 (234)
T PRK07577         91 ALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRA-IFGALDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAP  169 (234)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccc-ccCCCCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEec
Confidence            99999999887                 46899999975 4566778999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      |.+.|++.....+..+..........  |+++..+|+
T Consensus       170 g~~~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~  204 (234)
T PRK07577        170 GPIETELFRQTRPVGSEEEKRVLASI--PMRRLGTPE  204 (234)
T ss_pred             CcccCcccccccccchhHHHHHhhcC--CCCCCcCHH
Confidence            99999986554332222222333333  556655554

>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase

Probab=99.90  E-value=1.6e-22  Score=149.20  Aligned_cols=172  Identities=24%  Similarity=0.274  Sum_probs=135.1

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+. +.++...+.+... .++.++.+|+++.++++++++.  .+++++|+|||++|....  ..+.+.
T Consensus        18 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~   95 (239)
T TIGR01830        18 LAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDILVNNAGITRD--NLLMRM   95 (239)
T ss_pred             HHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhC
Confidence            678899999999874 4444444444332 3688999999999999999988  566889999999998765  556677


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++++..++.|+.                 .++++++||.++..+.+.+..|+++|.+++.+++.++.++...|++++.
T Consensus        96 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~g~~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~  175 (239)
T TIGR01830        96 KEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLMGNAGQANYAASKAGVIGFTKSLAKELASRNITVNA  175 (239)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            88889999998887                 3589999999888888999999999999999999999999988999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      ++||.+.|++....   .+.....+....  +.+++++++
T Consensus       176 i~pg~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~  210 (239)
T TIGR01830       176 VAPGFIDTDMTDKL---SEKVKKKILSQI--PLGRFGTPE  210 (239)
T ss_pred             EEECCCCChhhhhc---ChHHHHHHHhcC--CcCCCcCHH
Confidence            99999999876543   222222333333  445555544

This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.

>PRK06101 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2e-22  Score=149.16  Aligned_cols=146  Identities=19%  Similarity=0.118  Sum_probs=124.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|++++|+.+.+++.....   .++.++.||+++.+++++++++ .  ..+|.+|||||....  ....+.+.
T Consensus        20 ~L~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~--~~~d~~i~~ag~~~~--~~~~~~~~   92 (240)
T PRK06101         20 DYAKQGWQVIACGRNQSVLDELHTQS---ANIFTLAFDVTDHPGTKAALSQLP--FIPELWIFNAGDCEY--MDDGKVDA   92 (240)
T ss_pred             HHHhCCCEEEEEECCHHHHHHHHHhc---CCCeEEEeeCCCHHHHHHHHHhcc--cCCCEEEEcCccccc--CCCCCCCH
Confidence            36789999999999988776654432   2578899999999999999997 3  247999999997543  33345778


Q ss_pred             HHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           80 EKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        80 ~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      ++|++.+++|+.               .+++|++||..+..+.+....|+++|+++++|+++++.++.++||++++++||
T Consensus        93 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg  172 (240)
T PRK06101         93 TLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELALPRAEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPG  172 (240)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccCCCCCchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCC
Confidence            889999999998               45799999999999999999999999999999999999999999999999999


Q ss_pred             cccCcccch
Q 042200          145 VSATPFFCN  153 (181)
Q Consensus       145 ~v~t~~~~~  153 (181)
                      .+.|++...
T Consensus       173 ~i~t~~~~~  181 (240)
T PRK06101        173 FVATPLTDK  181 (240)
T ss_pred             cCCCCCcCC
Confidence            999998653

>PRK12827 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-22  Score=149.67  Aligned_cols=150  Identities=25%  Similarity=0.295  Sum_probs=127.0

Q ss_pred             cccCCCEEEEeec----chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADV----QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r----~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|++++|    +.+..+...+++... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+
T Consensus        26 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~  103 (249)
T PRK12827         26 LAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEFGRLDILVNNAGIATD--AAF  103 (249)
T ss_pred             HHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CCc
Confidence            6789999999765    344444444444332 4788999999999999999988  556789999999998776  677


Q ss_pred             ccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           75 LDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      .+.+.++|+..+++|+.                  .+++|++||..+..+.+++..|+.+|++++.++++++.++.+.|+
T Consensus       104 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i  183 (249)
T PRK12827        104 AELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAGVRGNRGQVNYAASKAGLIGLTKTLANELAPRGI  183 (249)
T ss_pred             ccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhhCc
Confidence            78888999999998888                  268999999999888889999999999999999999999998999


Q ss_pred             EEEEEecCcccCcccch
Q 042200          137 RVNSIAHIVSATPFFCN  153 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~  153 (181)
                      ++++++||+++|++...
T Consensus       184 ~~~~i~pg~v~t~~~~~  200 (249)
T PRK12827        184 TVNAVAPGAINTPMADN  200 (249)
T ss_pred             EEEEEEECCcCCCcccc
Confidence            99999999999997544

>PRK06197 short chain dehydrogenase; Provisional

Probab=99.89  E-value=6.7e-23  Score=156.88  Aligned_cols=150  Identities=17%  Similarity=0.113  Sum_probs=120.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.++.++..+++..   ..++.++.+|+++.+++++++++  .+++++|+||||||....  .  .
T Consensus        35 ~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li~nAg~~~~--~--~  110 (306)
T PRK06197         35 ALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYPRIDLLINNAGVMYT--P--K  110 (306)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCCCCCEEEECCccccC--C--C
Confidence            3678999999999998877766555532   13688999999999999999998  667899999999998643  2  2


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccc-------------cCccchhhHhhHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATET-------------IGEALYDYLMSKYAVLGLMK  125 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~-------------~~~~~~~y~~sK~a~~~l~~  125 (181)
                      ..+.++++..+++|+.                 .++||++||.++..             +.++...|+.||++++.|++
T Consensus       111 ~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~  190 (306)
T PRK06197        111 QTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAIHFDDLQWERRYNRVAAYGQSKLANLLFTY  190 (306)
T ss_pred             ccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCCCccccCcccCCCcHHHHHHHHHHHHHHHH
Confidence            3556778888888876                 46999999986543             23456789999999999999


Q ss_pred             HHHHHhcCCCeEEEEE--ecCcccCcccchh
Q 042200          126 NLCVELGQYDIRVNSI--AHIVSATPFFCNA  154 (181)
Q Consensus       126 ~la~~~~~~~i~v~~i--~Pg~v~t~~~~~~  154 (181)
                      .++.++++.|++++++  +||++.|++.++.
T Consensus       191 ~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~  221 (306)
T PRK06197        191 ELQRRLAAAGATTIAVAAHPGVSNTELARNL  221 (306)
T ss_pred             HHHHHhhcCCCCeEEEEeCCCcccCcccccC
Confidence            9999998888777766  6999999987654

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=99.89  E-value=2.2e-22  Score=149.43  Aligned_cols=151  Identities=23%  Similarity=0.314  Sum_probs=128.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecC--ChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVT--IDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~--~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+.+..++..+++...  .++.++.+|++  +.+++.++++.  ..++++|+||||||..... .++.
T Consensus        32 l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~-~~~~  110 (247)
T PRK08945         32 YARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFGRLDGVLHNAGLLGEL-GPME  110 (247)
T ss_pred             HHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCC-CCcc
Confidence            6788999999999988877776666432  35677788886  67888888887  5678999999999986442 4566


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.|++.+++|+.                 .++||++||..+..+.+.+..|+++|++++.+++.++.++...||++
T Consensus       111 ~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~  190 (247)
T PRK08945        111 QQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGRQGRANWGAYAVSKFATEGMMQVLADEYQGTNLRV  190 (247)
T ss_pred             cCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhcCCCCCCcccHHHHHHHHHHHHHHHHHhcccCEEE
Confidence            7788999999999997                 46899999999888889999999999999999999999999999999


Q ss_pred             EEEecCcccCcccch
Q 042200          139 NSIAHIVSATPFFCN  153 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~  153 (181)
                      ++++||.+.|++...
T Consensus       191 ~~v~pg~v~t~~~~~  205 (247)
T PRK08945        191 NCINPGGTRTAMRAS  205 (247)
T ss_pred             EEEecCCccCcchhh
Confidence            999999999987543

>PRK07102 short chain dehydrogenase; Provisional

Probab=99.89  E-value=2.1e-22  Score=149.24  Aligned_cols=149  Identities=14%  Similarity=0.141  Sum_probs=128.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++.+...+.+...  .++.++.+|+++.+++++++++ .  .++|++|||+|....  ..+.+.+
T Consensus        21 l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~~d~vv~~ag~~~~--~~~~~~~   96 (243)
T PRK07102         21 YAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP--ALPDIVLIAVGTLGD--QAACEAD   96 (243)
T ss_pred             HHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh--hcCCEEEECCcCCCC--cccccCC
Confidence            6789999999999988777666554322  4789999999999999999987 3  247999999998766  6677788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+++.+.+++|+.                 .+++|++||..+..+.+....|+++|+++++++++++.++.++||++++|
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v  176 (243)
T PRK07102         97 PALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRGRASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTV  176 (243)
T ss_pred             HHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEE
Confidence            8999999999988                 47899999998888888889999999999999999999999999999999


Q ss_pred             ecCcccCcccchh
Q 042200          142 AHIVSATPFFCNA  154 (181)
Q Consensus       142 ~Pg~v~t~~~~~~  154 (181)
                      +||.++|++....
T Consensus       177 ~pg~v~t~~~~~~  189 (243)
T PRK07102        177 KPGFVRTPMTAGL  189 (243)
T ss_pred             ecCcccChhhhcc
Confidence            9999999976553

>PRK07201 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1e-22  Score=170.20  Aligned_cols=150  Identities=19%  Similarity=0.245  Sum_probs=129.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC-
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT-   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~-   77 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  ..++++|++|||||....  ..+.+. 
T Consensus       391 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~  468 (657)
T PRK07201        391 VAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVDYLVNNAGRSIR--RSVENST  468 (657)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhcC
Confidence            6789999999999998888776665432 4788999999999999999998  677899999999997644  333322 


Q ss_pred             -CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 -DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 -~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                       ..++++..+++|+.                 .++||++||.++..+.+....|+++|+++++|+++++.+++++||+++
T Consensus       469 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~  548 (657)
T PRK07201        469 DRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTNAPRFSAYVASKAALDAFSDVAASETLSDGITFT  548 (657)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHhhCCcEE
Confidence             25788999999887                 478999999999888888999999999999999999999999999999


Q ss_pred             EEecCcccCcccch
Q 042200          140 SIAHIVSATPFFCN  153 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~  153 (181)
                      +|+||+++|++...
T Consensus       549 ~v~pg~v~T~~~~~  562 (657)
T PRK07201        549 TIHMPLVRTPMIAP  562 (657)
T ss_pred             EEECCcCcccccCc
Confidence            99999999998654

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=99.89  E-value=3.1e-22  Score=148.65  Aligned_cols=151  Identities=26%  Similarity=0.314  Sum_probs=130.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++.......+... .++.++.+|+++.+++.+++++  .+++++|+||||+|....  .++.+.+
T Consensus        26 l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~  103 (251)
T PRK12826         26 LAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLDILVANAGIFPL--TPFAEMD  103 (251)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCC
Confidence            6788999999999987777666655433 4688999999999999999988  667889999999998766  6666788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++++..++.|+.                 .+++|++||..+. .+.+....|+.+|++++.+++.++.++.+.|++++.
T Consensus       104 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~  183 (251)
T PRK12826        104 DEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVGYPGLAHYAASKAGLVGFTRALALELAARNITVNS  183 (251)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            8889888888877                 4679999999888 778888999999999999999999999988999999


Q ss_pred             EecCcccCcccchh
Q 042200          141 IAHIVSATPFFCNA  154 (181)
Q Consensus       141 i~Pg~v~t~~~~~~  154 (181)
                      ++||.+.|++..+.
T Consensus       184 i~pg~~~~~~~~~~  197 (251)
T PRK12826        184 VHPGGVDTPMAGNL  197 (251)
T ss_pred             EeeCCCCcchhhhc
Confidence            99999999976543

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.89  E-value=5.1e-22  Score=147.05  Aligned_cols=151  Identities=25%  Similarity=0.263  Sum_probs=126.1

Q ss_pred             cccCCCEEEEeecchH-HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDD-LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++.|+.+ ..+...+++... .++.++.+|+++.+++.+++++  ..++++|+|||+||....  ..+.+.
T Consensus        25 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  102 (248)
T PRK05557         25 LAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGGVDILVNNAGITRD--NLLMRM  102 (248)
T ss_pred             HHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccC
Confidence            6788999988887654 344444444322 4788999999999999999988  567889999999998766  666677


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++..+..|+.                 .+++|++||..+..+.+....|+.+|++++.+++.++.++...++++++
T Consensus       103 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~  182 (248)
T PRK05557        103 KEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLMGNPGQANYAASKAGVIGFTKSLARELASRGITVNA  182 (248)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCcCCCCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            88889988888887                 2679999999888888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchh
Q 042200          141 IAHIVSATPFFCNA  154 (181)
Q Consensus       141 i~Pg~v~t~~~~~~  154 (181)
                      ++||.+.|++..+.
T Consensus       183 v~pg~~~~~~~~~~  196 (248)
T PRK05557        183 VAPGFIETDMTDAL  196 (248)
T ss_pred             EecCccCCcccccc
Confidence            99999999876554

>PRK08177 short chain dehydrogenase; Provisional

Probab=99.89  E-value=4.9e-22  Score=145.73  Aligned_cols=149  Identities=16%  Similarity=0.178  Sum_probs=121.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|++++|+.+..+.. ..+   ..+.++.+|++|.++++++++. .. +++|+||||||.......++.+.+.
T Consensus        20 ~l~~~G~~V~~~~r~~~~~~~~-~~~---~~~~~~~~D~~d~~~~~~~~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~   94 (225)
T PRK08177         20 RLLERGWQVTATVRGPQQDTAL-QAL---PGVHIEKLDMNDPASLDQLLQRLQG-QRFDLLFVNAGISGPAHQSAADATA   94 (225)
T ss_pred             HHHhCCCEEEEEeCCCcchHHH-Hhc---cccceEEcCCCCHHHHHHHHHHhhc-CCCCEEEEcCcccCCCCCCcccCCH
Confidence            3678999999999997765543 222   2577889999999999999987 32 5799999999986442245667888


Q ss_pred             HHHHHhhheeec----------------ceeEEEeccccccccC---ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           80 EKVKRVMIMVVF----------------LGVLLFTANLATETIG---EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~---~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      ++++..+++|+.                .+.++++||..+..+.   ..+..|+++|++++.|+++++.+++++||++|+
T Consensus        95 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~  174 (225)
T PRK08177         95 AEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELPDGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLS  174 (225)
T ss_pred             HHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccCCCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEE
Confidence            999999999998                3688999987766543   356789999999999999999999999999999


Q ss_pred             EecCcccCcccchh
Q 042200          141 IAHIVSATPFFCNA  154 (181)
Q Consensus       141 i~Pg~v~t~~~~~~  154 (181)
                      |+||+++|++....
T Consensus       175 i~PG~i~t~~~~~~  188 (225)
T PRK08177        175 MHPGWVKTDMGGDN  188 (225)
T ss_pred             EcCCceecCCCCCC
Confidence            99999999986543

>PRK08324 short chain dehydrogenase; Validated

Probab=99.89  E-value=4.4e-22  Score=166.64  Aligned_cols=150  Identities=27%  Similarity=0.378  Sum_probs=132.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.++....++.....+.++.+|+++.+++.++++.  ..++++|+||||||....  ..+.+.+.
T Consensus       442 L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~--~~~~~~~~  519 (681)
T PRK08324        442 LAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAIS--GPIEETSD  519 (681)
T ss_pred             HHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            67889999999999988877766654324688999999999999999988  667899999999998876  77888899


Q ss_pred             HHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.|+..+++|+.                  .|+||++||..+..+.++...|+++|+++++++++++.++.++||++|.|
T Consensus       520 ~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v  599 (681)
T PRK08324        520 EDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPGPNFGAYGAAKAAELHLVRQLALELGPDGIRVNGV  599 (681)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCCCCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            999999999988                  27899999999998888999999999999999999999999999999999


Q ss_pred             ecCcc--cCcccch
Q 042200          142 AHIVS--ATPFFCN  153 (181)
Q Consensus       142 ~Pg~v--~t~~~~~  153 (181)
                      +||.+  .|+++..
T Consensus       600 ~Pg~v~~~t~~~~~  613 (681)
T PRK08324        600 NPDAVVRGSGIWTG  613 (681)
T ss_pred             eCceeecCCccccc
Confidence            99999  7876543

>PRK07578 short chain dehydrogenase; Provisional

Probab=99.89  E-value=1.9e-22  Score=145.27  Aligned_cols=113  Identities=18%  Similarity=0.222  Sum_probs=102.2

Q ss_pred             EEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEe
Q 042200           34 YVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFT   98 (181)
Q Consensus        34 ~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~i   98 (181)
                      .++||+++.+++++++++  ++++|+||||||....  .++.+.+.++|++.+++|+.               .++|+++
T Consensus        35 ~~~~D~~~~~~~~~~~~~--~~~id~lv~~ag~~~~--~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~i  110 (199)
T PRK07578         35 DVQVDITDPASIRALFEK--VGKVDAVVSAAGKVHF--APLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLT  110 (199)
T ss_pred             ceEecCCChHHHHHHHHh--cCCCCEEEECCCCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence            368999999999999884  5689999999998655  67778899999999999987               5789999


Q ss_pred             ccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200           99 ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus        99 ss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ||..+..+.+++..|+++|+++++|+++++.++ ++||++|+|+||+++|++.
T Consensus       111 ss~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~-~~gi~v~~i~Pg~v~t~~~  162 (199)
T PRK07578        111 SGILSDEPIPGGASAATVNGALEGFVKAAALEL-PRGIRINVVSPTVLTESLE  162 (199)
T ss_pred             cccccCCCCCCchHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEcCCcccCchh
Confidence            999998888999999999999999999999999 8899999999999999864

>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]

Probab=99.89  E-value=1.4e-21  Score=138.64  Aligned_cols=150  Identities=21%  Similarity=0.179  Sum_probs=121.6

Q ss_pred             cCCCE-EEEeecchHHHHHHHhHcCC-CCceEEEeeecCChhHHHHHHHh-ccc---CCccEEEEcccccCCCCCCcccC
Q 042200            4 QHRAK-VIIADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDF-TKF---GKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         4 ~~G~~-Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~-~~~---~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      ..|-. ++.++|+.+++.+..+.+.. ..+++.++.|+++.+++.+++++ .+.   .++|.+|||||+.... ....+.
T Consensus        26 ~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y-~~~~~~  104 (249)
T KOG1611|consen   26 DKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSY-NTVLKP  104 (249)
T ss_pred             CCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeec-ccccCC
Confidence            45666 45566677775444444322 26999999999999999999999 433   4799999999997664 455566


Q ss_pred             CHHHHHHhhheeec----------------------------ceeEEEeccccccccC---ccchhhHhhHHHHHHHHHH
Q 042200           78 DNEKVKRVMIMVVF----------------------------LGVLLFTANLATETIG---EALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------------------~~~iv~iss~~~~~~~---~~~~~y~~sK~a~~~l~~~  126 (181)
                      +.+.|.+.+++|..                            +..||++||..+..+.   .++.+|..||+|++.|+|+
T Consensus       105 ~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raaIinisS~~~s~~~~~~~~~~AYrmSKaAlN~f~ks  184 (249)
T KOG1611|consen  105 SRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAAIINISSSAGSIGGFRPGGLSAYRMSKAALNMFAKS  184 (249)
T ss_pred             cHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCcccccceeEEEeeccccccCCCCCcchhhhHhhHHHHHHHHHH
Confidence            77889999999998                            5689999997776443   4678999999999999999


Q ss_pred             HHHHhcCCCeEEEEEecCcccCcccchh
Q 042200          127 LCVELGQYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ++.++++.+|.|..+|||+|+|+|...-
T Consensus       185 ls~dL~~~~ilv~sihPGwV~TDMgg~~  212 (249)
T KOG1611|consen  185 LSVDLKDDHILVVSIHPGWVQTDMGGKK  212 (249)
T ss_pred             hhhhhcCCcEEEEEecCCeEEcCCCCCC
Confidence            9999999999999999999999997653

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=99.88  E-value=8.3e-22  Score=145.77  Aligned_cols=150  Identities=25%  Similarity=0.338  Sum_probs=129.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++.+.....+... .++.++.+|+++.+++.+++++  ..++++|+|||++|....  ....+.+
T Consensus        25 l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~~  102 (246)
T PRK05653         25 LAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALDILVNNAGITRD--ALLPRMS  102 (246)
T ss_pred             HHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCcCCC--CChhhCC
Confidence            6789999999999988777666655432 4788999999999999999987  556889999999998766  5666778


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..++.|+.                 .++||++||..+..+.++...|+.+|++++.++++++.++.+.+++++.+
T Consensus       103 ~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i  182 (246)
T PRK05653        103 EEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTGNPGQTNYSAAKAGVIGFTKALALELASRGITVNAV  182 (246)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccCCCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            8888888888777                 36899999998888888889999999999999999999999889999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.+.+++..+
T Consensus       183 ~pg~~~~~~~~~  194 (246)
T PRK05653        183 APGFIDTDMTEG  194 (246)
T ss_pred             EeCCcCCcchhh
Confidence            999999987653

>PRK12829 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.1e-21  Score=146.80  Aligned_cols=151  Identities=28%  Similarity=0.394  Sum_probs=128.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+..+...+..... ++.++.+|+++.+++..++++  ..++++|+|||++|..... ......+.
T Consensus        31 L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~  108 (264)
T PRK12829         31 FAEAGARVHVCDVSEAALAATAARLPGA-KVTATVADVADPAQVERVFDTAVERFGGLDVLVNNAGIAGPT-GGIDEITP  108 (264)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHhcC-ceEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CCcccCCH
Confidence            6789999999999987777665555432 578899999999999999988  5668899999999987331 56667788


Q ss_pred             HHHHHhhheeec-----------------c-eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF-----------------L-GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~-~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.+...+++|+.                 . +.|+++||.++..+.+.+..|+.+|++++.+++.++.++...+++++++
T Consensus       109 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l  188 (264)
T PRK12829        109 EQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRLGYPGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAI  188 (264)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEecccccccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            889999988877                 2 6799999988888888889999999999999999999998889999999


Q ss_pred             ecCcccCcccchh
Q 042200          142 AHIVSATPFFCNA  154 (181)
Q Consensus       142 ~Pg~v~t~~~~~~  154 (181)
                      +||++.|++....
T Consensus       189 ~pg~v~~~~~~~~  201 (264)
T PRK12829        189 LPGIVRGPRMRRV  201 (264)
T ss_pred             ecCCcCChHHHHH
Confidence            9999999976554

>PRK07326 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=143.71  Aligned_cols=151  Identities=22%  Similarity=0.275  Sum_probs=130.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++....++.++.+|+++.+++..++++  ..++++|+|||++|....  +.+.+.+.
T Consensus        26 l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~  103 (237)
T PRK07326         26 LLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDVLIANAGVGHF--APVEELTP  103 (237)
T ss_pred             HHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CchhhCCH
Confidence            66789999999999888877777664323688999999999999999988  566789999999998765  66777888


Q ss_pred             HHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           80 EKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++++..+++|+.                .++||++||..+..+.++...|+.+|++++++++.++.++...|++++.|+|
T Consensus       104 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~p  183 (237)
T PRK07326        104 EEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNFFAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMP  183 (237)
T ss_pred             HHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEee
Confidence            999999988877                4679999999888888888899999999999999999999999999999999


Q ss_pred             CcccCcccchh
Q 042200          144 IVSATPFFCNA  154 (181)
Q Consensus       144 g~v~t~~~~~~  154 (181)
                      |.+.|++....
T Consensus       184 g~~~t~~~~~~  194 (237)
T PRK07326        184 GSVATHFNGHT  194 (237)
T ss_pred             ccccCcccccc
Confidence            99999876543

>PRK09135 pteridine reductase; Provisional

Probab=99.88  E-value=1.9e-21  Score=144.27  Aligned_cols=173  Identities=17%  Similarity=0.153  Sum_probs=132.7

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+ .+..+.....+...  ..+.++.+|+++.+++.++++.  .+++++|+||||||....  .++.
T Consensus        25 ~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~  102 (249)
T PRK09135         25 TLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGRLDALVNNASSFYP--TPLG  102 (249)
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChh
Confidence            367899999999986 44444444433321  3588899999999999999998  667889999999998765  5666


Q ss_pred             cCCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           76 DTDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.+.++++..+++|+.                .+.++++++..+..+.++...|+.+|++++.+++.++.++.+ +++++
T Consensus       103 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~-~i~~~  181 (249)
T PRK09135        103 SITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAERPLKGYPVYCAAKAALEMLTRSLALELAP-EVRVN  181 (249)
T ss_pred             hCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcCCCCCchhHHHHHHHHHHHHHHHHHHHCC-CCeEE
Confidence            6778889999999988                567888888777777888899999999999999999999976 69999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAA  180 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  180 (181)
                      +++||++.|++....+  ............  ++++.++++
T Consensus       182 ~v~pg~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~  218 (249)
T PRK09135        182 AVAPGAILWPEDGNSF--DEEARQAILART--PLKRIGTPE  218 (249)
T ss_pred             EEEeccccCccccccC--CHHHHHHHHhcC--CcCCCcCHH
Confidence            9999999999754322  223333333333  455555554

>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]

Probab=99.88  E-value=8.2e-22  Score=146.63  Aligned_cols=151  Identities=26%  Similarity=0.350  Sum_probs=126.2

Q ss_pred             cccCCCEEEEeecchHH--HHHHHhHcCCC--CceEEEeeecCC-hhHHHHHHHh--cccCCccEEEEcccccCCCCC-C
Q 042200            2 FIQHRAKVIIADVQDDL--CRALCKEFDSD--ELISYVCCNVTI-DSDVKNVFDF--TKFGKLDIMFNNAGIISNMDR-T   73 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~--~~~~~~~~D~~~-~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~-~   73 (181)
                      |+++|+.|+++.|+.+.  .+...+.....  ..+.+..+|+++ .++++.+++.  ..+|++|++|||||....  . .
T Consensus        25 l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~  102 (251)
T COG1028          25 LAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEEFGRIDILVNNAGIAGP--DAP  102 (251)
T ss_pred             HHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCC
Confidence            67899998888887543  33333333311  158888999998 9999999999  668999999999998765  3 6


Q ss_pred             cccCCHHHHHHhhheeec------------ce--eEEEeccccccccCccc-hhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF------------LG--VLLFTANLATETIGEAL-YDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~------------~~--~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|+..+++|+.            ..  +||++||..+. +.++. ..|++||+|+.+|+++++.++.++||++
T Consensus       103 ~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~Iv~isS~~~~-~~~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v  181 (251)
T COG1028         103 LEELTEEDWDRVIDVNLLGAFLLTRAALPLMKKQRIVNISSVAGL-GGPPGQAAYAASKAALIGLTKALALELAPRGIRV  181 (251)
T ss_pred             hhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhhCeEEEECCchhc-CCCCCcchHHHHHHHHHHHHHHHHHHHhhhCcEE
Confidence            778888999999999998            22  89999999998 77774 9999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhc
Q 042200          139 NSIAHIVSATPFFCNAM  155 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~  155 (181)
                      ++|+||++.|++.....
T Consensus       182 ~~v~PG~~~t~~~~~~~  198 (251)
T COG1028         182 NAVAPGYIDTPMTAALE  198 (251)
T ss_pred             EEEEeccCCCcchhhhh
Confidence            99999999999876543

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=99.88  E-value=1.8e-21  Score=149.98  Aligned_cols=152  Identities=16%  Similarity=0.080  Sum_probs=121.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|+++.+++++++++  ..++++|+||||||..... ....+.
T Consensus        25 ~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~iD~li~nAg~~~~~-~~~~~~  103 (322)
T PRK07453         25 ALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPLDALVCNAAVYMPL-LKEPLR  103 (322)
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCccEEEECCcccCCC-CCCCCC
Confidence            36789999999999998888877776432 4688999999999999999988  4456899999999986431 223456


Q ss_pred             CHHHHHHhhheeec----------------c---eeEEEeccccccc---------------------------------
Q 042200           78 DNEKVKRVMIMVVF----------------L---GVLLFTANLATET---------------------------------  105 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~---~~iv~iss~~~~~---------------------------------  105 (181)
                      +.++++..+++|+.                .   ++||++||.....                                 
T Consensus       104 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (322)
T PRK07453        104 SPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANPKELGGKIPIPAPADLGDLSGFEAGFKAPISMAD  183 (322)
T ss_pred             CHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCccccCCccCCCCccchhhhhcchhcccccccccC
Confidence            88999999999998                1   4999999965421                                 


Q ss_pred             --cCccchhhHhhHHHHHHHHHHHHHHhc-CCCeEEEEEecCcc-cCcccch
Q 042200          106 --IGEALYDYLMSKYAVLGLMKNLCVELG-QYDIRVNSIAHIVS-ATPFFCN  153 (181)
Q Consensus       106 --~~~~~~~y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~Pg~v-~t~~~~~  153 (181)
                        ++.+...|+.||.+...+++.+++++. .+||++++++||.| .|++.++
T Consensus       184 ~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~  235 (322)
T PRK07453        184 GKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTPLFRN  235 (322)
T ss_pred             ccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCccccc
Confidence              112356799999999999999999995 47999999999999 5887544

>PRK09291 short chain dehydrogenase; Provisional

Probab=99.88  E-value=1.7e-21  Score=145.31  Aligned_cols=146  Identities=23%  Similarity=0.215  Sum_probs=124.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.+..++........ ..+.++.+|+++.+++.+++.    +++|+||||||....  .++.+.+.+
T Consensus        22 l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~----~~id~vi~~ag~~~~--~~~~~~~~~   95 (257)
T PRK09291         22 LARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAE----WDVDVLLNNAGIGEA--GAVVDIPVE   95 (257)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhc----CCCCEEEECCCcCCC--cCcccCCHH
Confidence            6789999999999987766654443322 368899999999999888766    479999999998776  777788999


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      +++..+++|+.                 .++||++||..+..+.++...|+++|++++.+++.++.++.+.||++++|+|
T Consensus        96 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~p  175 (257)
T PRK09291         96 LVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITGPFTGAYCASKHALEAIAEAMHAELKPFGIQVATVNP  175 (257)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCCCCcchhHHHHHHHHHHHHHHHHHHHhcCcEEEEEec
Confidence            99999988877                 4789999999888888888999999999999999999999989999999999


Q ss_pred             CcccCcccch
Q 042200          144 IVSATPFFCN  153 (181)
Q Consensus       144 g~v~t~~~~~  153 (181)
                      |++.|++...
T Consensus       176 g~~~t~~~~~  185 (257)
T PRK09291        176 GPYLTGFNDT  185 (257)
T ss_pred             Ccccccchhh
Confidence            9999987543

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=99.87  E-value=9.5e-22  Score=137.71  Aligned_cols=128  Identities=27%  Similarity=0.447  Sum_probs=115.4

Q ss_pred             cccCCC-EEEEeecc--hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRA-KVIIADVQ--DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|. .|++++|+  .+..++..+++... .++.++++|+++.+++++++++  .+++++|++|||+|....  +.+.
T Consensus        20 l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~--~~~~   97 (167)
T PF00106_consen   20 LARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPLDILINNAGIFSD--GSLD   97 (167)
T ss_dssp             HHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSESEEEEECSCTTS--BSGG
T ss_pred             HHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccc
Confidence            677755 68999998  67777776666533 5899999999999999999999  678899999999999886  8999


Q ss_pred             cCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           76 DTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      +.+.+.|++.+++|+.             .|+||++||..+..+.+.+..|+++|+++.+|+++++.|+
T Consensus        98 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~askaal~~~~~~la~e~  166 (167)
T PF00106_consen   98 DLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGSPGMSAYSASKAALRGLTQSLAAEL  166 (167)
T ss_dssp             GSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSSTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccchhhhhccccccceeeeeeehheeccccceEEecchhhccCCCCChhHHHHHHHHHHHHHHHHHhc
Confidence            9999999999999998             7899999999999999999999999999999999999986

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=99.86  E-value=5.1e-21  Score=142.48  Aligned_cols=150  Identities=23%  Similarity=0.334  Sum_probs=128.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+..+...+++... .++.++.+|+++.+++..+++.  ..++++|+||||+|....  ....+.+
T Consensus        21 l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--~~~~~~~   98 (255)
T TIGR01963        21 LAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDILVNNAGIQHV--APIEEFP   98 (255)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCC
Confidence            6789999999999988777766655332 4688999999999999999988  556789999999998765  5556677


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..++.|+.                 .+++|++||..+..+.+.+..|+.+|++++.+++.++.++.+.+|+++.+
T Consensus        99 ~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i  178 (255)
T TIGR01963        99 PEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVASPFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAI  178 (255)
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            8888888888766                 46899999988888888899999999999999999999998889999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.+.|++..+
T Consensus       179 ~pg~v~~~~~~~  190 (255)
T TIGR01963       179 CPGYVRTPLVEK  190 (255)
T ss_pred             ecCccccHHHHH
Confidence            999999987543

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PRK12828 short chain dehydrogenase; Provisional

Probab=99.86  E-value=6.2e-21  Score=140.61  Aligned_cols=148  Identities=20%  Similarity=0.179  Sum_probs=126.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++..+...++.. ..+..+.+|++|.+++.+++++  ..++++|+|||++|....  ..+.+.+.
T Consensus        27 l~~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~~~~~~~  103 (239)
T PRK12828         27 LAARGARVALIGRGAAPLSQTLPGVPA-DALRIGGIDLVDPQAARRAVDEVNRQFGRLDALVNIAGAFVW--GTIADGDA  103 (239)
T ss_pred             HHHCCCeEEEEeCChHhHHHHHHHHhh-cCceEEEeecCCHHHHHHHHHHHHHHhCCcCEEEECCcccCc--CChhhCCH
Confidence            678899999999998777666555543 2467788999999999999998  667899999999998655  56666788


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +++++.++.|+.                 .+++|++||..+..+.+.+..|+.+|++++.+++.++.++.+++++++.++
T Consensus       104 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~  183 (239)
T PRK12828        104 DTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAGPGMGAYAAAKAGVARLTEALAAELLDRGITVNAVL  183 (239)
T ss_pred             HHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence            888888888876                 468999999988888888899999999999999999999988899999999


Q ss_pred             cCcccCcccc
Q 042200          143 HIVSATPFFC  152 (181)
Q Consensus       143 Pg~v~t~~~~  152 (181)
                      ||++.|++..
T Consensus       184 pg~v~~~~~~  193 (239)
T PRK12828        184 PSIIDTPPNR  193 (239)
T ss_pred             cCcccCcchh
Confidence            9999998643

>PRK07806 short chain dehydrogenase; Provisional

Probab=99.86  E-value=5.5e-21  Score=141.93  Aligned_cols=168  Identities=15%  Similarity=0.102  Sum_probs=121.0

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+. +..+....++... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..   .
T Consensus        26 l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~--~~---~  100 (248)
T PRK07806         26 LAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGLDALVLNASGGME--SG---M  100 (248)
T ss_pred             HHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCcEEEECCCCCCC--CC---C
Confidence            678999999999975 3444444444322 3678899999999999999988  666789999999986432  11   1


Q ss_pred             CHHHHHHhhheeec---------------ceeEEEecccccc-----ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           78 DNEKVKRVMIMVVF---------------LGVLLFTANLATE-----TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        78 ~~~~~~~~~~~n~~---------------~~~iv~iss~~~~-----~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                         ++...+++|+.               .+++|++||..+.     .+.+.+..|+.+|++++.++++++.+++++||+
T Consensus       101 ---~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~Y~~sK~a~e~~~~~l~~~~~~~~i~  177 (248)
T PRK07806        101 ---DEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTVKTMPEYEPVARSKRAGEDALRALRPELAEKGIG  177 (248)
T ss_pred             ---CcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccccCCccccHHHHHHHHHHHHHHHHHHHhhccCeE
Confidence               12344555554               4689999986543     223456789999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCC-ChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGI-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++|+||++.|++...+... .++..++  ...  |++++.+|+|
T Consensus       178 v~~v~pg~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~d  218 (248)
T PRK07806        178 FVVVSGDMIEGTVTATLLNRLNPGAIEA--RRE--AAGKLYTVSE  218 (248)
T ss_pred             EEEeCCccccCchhhhhhccCCHHHHHH--HHh--hhcccCCHHH
Confidence            99999999999876543321 2232222  223  6678887764

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=5.9e-21  Score=141.58  Aligned_cols=150  Identities=23%  Similarity=0.199  Sum_probs=137.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +..+|++|.++.|+.+++.++.++++-.   ..+.+..+|++|.+++...+++  ..++.+|.+|+|||..-+  +.+.+
T Consensus        53 ~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~d~l~~cAG~~v~--g~f~~  130 (331)
T KOG1210|consen   53 CKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPIDNLFCCAGVAVP--GLFED  130 (331)
T ss_pred             HHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCcceEEEecCcccc--ccccc
Confidence            4578999999999999999998887653   3477999999999999999999  556889999999999888  99999


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.+.++..+++|+.                  .|+|+.++|.++..+..++++|+++|+|+.+|+..++.|+.++||+|
T Consensus       131 ~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaYs~sK~alrgLa~~l~qE~i~~~v~V  210 (331)
T KOG1210|consen  131 LSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAYSPSKFALRGLAEALRQELIKYGVHV  210 (331)
T ss_pred             CCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCcccccccccHHHHHHHHHHHHHHHHhhcceEE
Confidence            999999999999999                  46999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccch
Q 042200          139 NSIAHIVSATPFFCN  153 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~  153 (181)
                      ....|+-+.||.+..
T Consensus       211 t~~~P~~~~tpGfE~  225 (331)
T KOG1210|consen  211 TLYYPPDTLTPGFER  225 (331)
T ss_pred             EEEcCCCCCCCcccc
Confidence            999999999996544

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.86  E-value=5.1e-21  Score=145.66  Aligned_cols=147  Identities=16%  Similarity=0.163  Sum_probs=126.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++.+||.++.++..+++...   ..+.++.+|+++.++|+++.++  .+++++|++|||||+...  ..  
T Consensus        54 ~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~~ldvLInNAGV~~~--~~--  129 (314)
T KOG1208|consen   54 ELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEGPLDVLINNAGVMAP--PF--  129 (314)
T ss_pred             HHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCCCccEEEeCcccccC--Cc--
Confidence            47899999999999999999888888653   7889999999999999999999  677899999999999876  33  


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEecccccccc-------------CccchhhHhhHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETI-------------GEALYDYLMSKYAVLGLMK  125 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~-------------~~~~~~y~~sK~a~~~l~~  125 (181)
                      ..+.|.++..+.+|++                 .++||++||......             +.....|+.||.+...+++
T Consensus       130 ~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~~l~~~~~~~~~~~~~Y~~SKla~~l~~~  209 (314)
T KOG1208|consen  130 SLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLKDLSGEKAKLYSSDAAYALSKLANVLLAN  209 (314)
T ss_pred             ccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchhhccchhccCccchhHHHHhHHHHHHHHH
Confidence            5677899999999998                 379999999775110             2223359999999999999


Q ss_pred             HHHHHhcCCCeEEEEEecCcccCc-ccc
Q 042200          126 NLCVELGQYDIRVNSIAHIVSATP-FFC  152 (181)
Q Consensus       126 ~la~~~~~~~i~v~~i~Pg~v~t~-~~~  152 (181)
                      .|++.+.. ||+++.++||.+.|+ +.+
T Consensus       210 eL~k~l~~-~V~~~~~hPG~v~t~~l~r  236 (314)
T KOG1208|consen  210 ELAKRLKK-GVTTYSVHPGVVKTTGLSR  236 (314)
T ss_pred             HHHHHhhc-CceEEEECCCcccccceec
Confidence            99999998 999999999999998 544

>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.86  E-value=1e-20  Score=140.02  Aligned_cols=151  Identities=23%  Similarity=0.289  Sum_probs=124.7

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++.|+. ...+...+.+... .++.++.+|+++.+++.+++++  ..++++|+|||+||....  ..+.+.
T Consensus        26 l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id~vi~~ag~~~~--~~~~~~  103 (249)
T PRK12825         26 LARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRIDILVNNAGIFED--KPLADM  103 (249)
T ss_pred             HHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCCCEEEECCccCCC--CChhhC
Confidence            678999988866654 3333333333221 3688999999999999999987  556789999999997655  666677


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+++...+++|+.                 .+++|++||..+..+.++...|+.+|++++.+++.++.++..+|++++.
T Consensus       104 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~  183 (249)
T PRK12825        104 SDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPGWPGRSNYAAAKAGLVGLTKALARELAEYGITVNM  183 (249)
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            88889998888877                 4689999999988888888999999999999999999999888999999


Q ss_pred             EecCcccCcccchh
Q 042200          141 IAHIVSATPFFCNA  154 (181)
Q Consensus       141 i~Pg~v~t~~~~~~  154 (181)
                      ++||.+.|++....
T Consensus       184 i~pg~~~~~~~~~~  197 (249)
T PRK12825        184 VAPGDIDTDMKEAT  197 (249)
T ss_pred             EEECCccCCccccc
Confidence            99999999986554

>PRK08264 short chain dehydrogenase; Validated

Probab=99.85  E-value=4.7e-20  Score=136.17  Aligned_cols=143  Identities=21%  Similarity=0.173  Sum_probs=123.5

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc-cCCCCCCcccCCH
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI-ISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~-~~~~~~~~~~~~~   79 (181)
                      |+++|+ +|++++|+.+++++    ..  ..+.++.+|+++.+++.++++.  ++++|+|||++|. ...  ..+.+.+.
T Consensus        26 l~~~G~~~V~~~~r~~~~~~~----~~--~~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~~~~~--~~~~~~~~   95 (238)
T PRK08264         26 LLARGAAKVYAAARDPESVTD----LG--PRVVPLQLDVTDPASVAAAAEA--ASDVTILVNNAGIFRTG--SLLLEGDE   95 (238)
T ss_pred             HHHCCcccEEEEecChhhhhh----cC--CceEEEEecCCCHHHHHHHHHh--cCCCCEEEECCCcCCCC--CccccCCH
Confidence            678999 89999999876654    22  3688999999999999998884  5679999999998 433  66777889


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +++...+++|+.                 .+++|++||..+..+.++...|+.+|++++.+++.++.++.++|++++.++
T Consensus        96 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~  175 (238)
T PRK08264         96 DALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVNFPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVH  175 (238)
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccCCCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence            999999999887                 467999999988888888999999999999999999999999999999999


Q ss_pred             cCcccCcccchh
Q 042200          143 HIVSATPFFCNA  154 (181)
Q Consensus       143 Pg~v~t~~~~~~  154 (181)
                      ||.++|++....
T Consensus       176 pg~v~t~~~~~~  187 (238)
T PRK08264        176 PGPIDTDMAAGL  187 (238)
T ss_pred             CCcccccccccC
Confidence            999999986543

>PRK09009 C factor cell-cell signaling protein; Provisional

Probab=99.85  E-value=1.3e-20  Score=138.93  Aligned_cols=143  Identities=15%  Similarity=0.197  Sum_probs=111.1

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCC----CCCcc
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNM----DRTTL   75 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~----~~~~~   75 (181)
                      |+++  +..|++.+|+....      .. ..++.++++|+++.++++++.+  +++++|+||||||.....    +..+.
T Consensus        20 l~~~~~~~~v~~~~~~~~~~------~~-~~~~~~~~~Dls~~~~~~~~~~--~~~~id~li~~aG~~~~~~~~~~~~~~   90 (235)
T PRK09009         20 LLERYPDATVHATYRHHKPD------FQ-HDNVQWHALDVTDEAEIKQLSE--QFTQLDWLINCVGMLHTQDKGPEKSLQ   90 (235)
T ss_pred             HHHhCCCCEEEEEccCCccc------cc-cCceEEEEecCCCHHHHHHHHH--hcCCCCEEEECCccccccccCcccccc
Confidence            4555  45677777654321      11 1368899999999999988766  467899999999987531    13566


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccc---cCccchhhHhhHHHHHHHHHHHHHHhcC--
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATET---IGEALYDYLMSKYAVLGLMKNLCVELGQ--  133 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~---~~~~~~~y~~sK~a~~~l~~~la~~~~~--  133 (181)
                      +.+.+.|+..+++|+.                 .++++++||..+..   +.+++..|+++|+++++|+++|+.++.+  
T Consensus        91 ~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~  170 (235)
T PRK09009         91 ALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISDNRLGGWYSYRASKAALNMFLKTLSIEWQRSL  170 (235)
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeecccccccCCCCCcchhhhhHHHHHHHHHHHHHHhhccc
Confidence            7788999999999987                 36899998765533   3456779999999999999999999986  


Q ss_pred             CCeEEEEEecCcccCcccch
Q 042200          134 YDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      .+|++++|+||+++|++...
T Consensus       171 ~~i~v~~v~PG~v~t~~~~~  190 (235)
T PRK09009        171 KHGVVLALHPGTTDTALSKP  190 (235)
T ss_pred             CCeEEEEEcccceecCCCcc
Confidence            69999999999999998654

>PRK06953 short chain dehydrogenase; Provisional

Probab=99.83  E-value=2.7e-19  Score=130.96  Aligned_cols=147  Identities=15%  Similarity=0.020  Sum_probs=117.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.+..++... .    .+.++.+|+++.+++++++.+ .. +++|++|||+|..........+.+.+
T Consensus        21 L~~~G~~v~~~~r~~~~~~~~~~-~----~~~~~~~D~~~~~~v~~~~~~~~~-~~~d~vi~~ag~~~~~~~~~~~~~~~   94 (222)
T PRK06953         21 YRADGWRVIATARDAAALAALQA-L----GAEALALDVADPASVAGLAWKLDG-EALDAAVYVAGVYGPRTEGVEPITRE   94 (222)
T ss_pred             HHhCCCEEEEEECCHHHHHHHHh-c----cceEEEecCCCHHHHHHHHHHhcC-CCCCEEEECCCcccCCCCCcccCCHH
Confidence            67899999999999877665432 1    356899999999999998776 32 47999999999874311345567889


Q ss_pred             HHHHhhheeec----------------ceeEEEeccccccccCccch---hhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           81 KVKRVMIMVVF----------------LGVLLFTANLATETIGEALY---DYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        81 ~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~---~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +|+..+++|+.                .+++++++|..+..+..+..   .|+++|++++.+++.++.++.  ++++++|
T Consensus        95 ~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~--~i~v~~v  172 (222)
T PRK06953         95 DFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDATGTTGWLYRASKAALNDALRAASLQAR--HATCIAL  172 (222)
T ss_pred             HHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccccccccCCCccccHHhHHHHHHHHHHHhhhcc--CcEEEEE
Confidence            99999999998                46899999987766543322   599999999999999999875  7999999


Q ss_pred             ecCcccCcccchhcC
Q 042200          142 AHIVSATPFFCNAMG  156 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~  156 (181)
                      +||+++|++.....+
T Consensus       173 ~Pg~i~t~~~~~~~~  187 (222)
T PRK06953        173 HPGWVRTDMGGAQAA  187 (222)
T ss_pred             CCCeeecCCCCCCCC
Confidence            999999998765433

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=99.83  E-value=1.2e-19  Score=133.97  Aligned_cols=146  Identities=17%  Similarity=0.193  Sum_probs=119.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.++.....+....++.++.+|+++.+++.+++++  ..++++|.+||++|....  ....  ..
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ii~~ag~~~~--~~~~--~~  100 (238)
T PRK05786         25 ALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAIDGLVVTVGGYVE--DTVE--EF  100 (238)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEEcCCCcCC--CchH--HH
Confidence            56899999999999887776655543323688899999999999999988  456889999999997543  3322  23


Q ss_pred             HHHHHhhheeec---------------ceeEEEeccccccc-cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           80 EKVKRVMIMVVF---------------LGVLLFTANLATET-IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        80 ~~~~~~~~~n~~---------------~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++++..++.|+.               .+++|++||..+.. +.+....|+.+|++++.++++++.++...||++++|+|
T Consensus       101 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~p  180 (238)
T PRK05786        101 SGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKASPDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAP  180 (238)
T ss_pred             HHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEec
Confidence            778888888877               46799999887643 56777889999999999999999999989999999999


Q ss_pred             CcccCccc
Q 042200          144 IVSATPFF  151 (181)
Q Consensus       144 g~v~t~~~  151 (181)
                      |++.|++.
T Consensus       181 g~v~~~~~  188 (238)
T PRK05786        181 TTISGDFE  188 (238)
T ss_pred             CccCCCCC
Confidence            99999863

>PRK08017 oxidoreductase; Provisional

Probab=99.83  E-value=1.7e-19  Score=134.53  Aligned_cols=145  Identities=19%  Similarity=0.151  Sum_probs=123.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-c--ccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-T--KFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~--~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++++...+ .    .+..+.+|+++.+++..+++. .  ..+++|++|||+|....  .++.+.+
T Consensus        22 l~~~g~~v~~~~r~~~~~~~~~~-~----~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ag~~~~--~~~~~~~   94 (256)
T PRK08017         22 LKRRGYRVLAACRKPDDVARMNS-L----GFTGILLDLDDPESVERAADEVIALTDNRLYGLFNNAGFGVY--GPLSTIS   94 (256)
T ss_pred             HHHCCCEEEEEeCCHHHhHHHHh-C----CCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEECCCCCCc--cchhhCC
Confidence            67889999999999877765432 1    367889999999999988887 2  23679999999997655  6677788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++++..++.|+.                 .++||++||..+..+.+....|+++|++++.++++++.++.+++++++.+
T Consensus        95 ~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v  174 (256)
T PRK08017         95 RQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLISTPGRGAYAASKYALEAWSDALRMELRHSGIKVSLI  174 (256)
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEE
Confidence            8999999998886                 47899999998888888999999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||.+.|++..+
T Consensus       175 ~pg~~~t~~~~~  186 (256)
T PRK08017        175 EPGPIRTRFTDN  186 (256)
T ss_pred             eCCCcccchhhc
Confidence            999999987654

>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.82  E-value=9.8e-20  Score=129.36  Aligned_cols=135  Identities=21%  Similarity=0.164  Sum_probs=108.7

Q ss_pred             EEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc-ccCCHHHHHHhhheeec------------------c
Q 042200           34 YVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT-LDTDNEKVKRVMIMVVF------------------L   92 (181)
Q Consensus        34 ~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~-~~~~~~~~~~~~~~n~~------------------~   92 (181)
                      ....|+++..-+..+++.  .++++.|++|||||...+...-. ..-+.+.|++.++.|++                  .
T Consensus        58 ~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~  137 (253)
T KOG1204|consen   58 HVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVN  137 (253)
T ss_pred             eechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCcc
Confidence            344566666667777777  67789999999999987641112 25577889999999999                  3


Q ss_pred             eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcC---CChHHHHHHHHHh
Q 042200           93 GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG---IDKKTFKELLYAS  169 (181)
Q Consensus        93 ~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~  169 (181)
                      +.+|++||.++..+++.|..||.+|+|.++|++.|+.|-. .++++..++||.++|+|....-+   .+|+-.+.+.+.-
T Consensus       138 ~~vVnvSS~aav~p~~~wa~yc~~KaAr~m~f~~lA~EEp-~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~  216 (253)
T KOG1204|consen  138 GNVVNVSSLAAVRPFSSWAAYCSSKAARNMYFMVLASEEP-FDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK  216 (253)
T ss_pred             CeEEEecchhhhccccHHHHhhhhHHHHHHHHHHHhhcCc-cceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH
Confidence            7899999999999999999999999999999999999988 89999999999999998755432   2555555555543

>PRK08219 short chain dehydrogenase; Provisional

Probab=99.80  E-value=2.1e-18  Score=126.24  Aligned_cols=143  Identities=17%  Similarity=0.199  Sum_probs=119.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++ ++|++++|+.+..++......   .+.++.+|++|.+++.++++.  ++++|+|||++|....  ..+.+.+.++
T Consensus        23 l~~~-~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~~~~--~~~~~~~~~~   94 (227)
T PRK08219         23 LAPT-HTLLLGGRPAERLDELAAELP---GATPFPVDLTDPEAIAAAVEQ--LGRLDVLVHNAGVADL--GPVAESTVDE   94 (227)
T ss_pred             HHhh-CCEEEEeCCHHHHHHHHHHhc---cceEEecCCCCHHHHHHHHHh--cCCCCEEEECCCcCCC--CCcccCCHHH
Confidence            5667 899999999877666544432   477899999999999998884  4579999999998665  5666778888


Q ss_pred             HHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCc
Q 042200           82 VKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIV  145 (181)
Q Consensus        82 ~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~  145 (181)
                      |...++.|+.                .+++|++||..+..+.++...|+.+|++++.+++.++.++... +++++|.||+
T Consensus        95 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~~~~~~y~~~K~a~~~~~~~~~~~~~~~-i~~~~i~pg~  173 (227)
T PRK08219         95 WRATLEVNVVAPAELTRLLLPALRAAHGHVVFINSGAGLRANPGWGSYAASKFALRALADALREEEPGN-VRVTSVHPGR  173 (227)
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEcchHhcCcCCCCchHHHHHHHHHHHHHHHHHHhcCC-ceEEEEecCC
Confidence            8888887777                4689999999888888889999999999999999999988866 9999999999


Q ss_pred             ccCcccch
Q 042200          146 SATPFFCN  153 (181)
Q Consensus       146 v~t~~~~~  153 (181)
                      +.+++...
T Consensus       174 ~~~~~~~~  181 (227)
T PRK08219        174 TDTDMQRG  181 (227)
T ss_pred             ccchHhhh
Confidence            99886543

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=99.78  E-value=2.6e-18  Score=157.39  Aligned_cols=118  Identities=17%  Similarity=0.078  Sum_probs=107.9

Q ss_pred             CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec-------------ceeE
Q 042200           30 ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-------------LGVL   95 (181)
Q Consensus        30 ~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-------------~~~i   95 (181)
                      .++.++.||++|.+++.+++++ ...++||+||||||....  +.+.+.+.++|++++++|+.             .++|
T Consensus      2094 ~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~--~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~~~~~~I 2171 (2582)
T TIGR02813      2094 ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLAD--KHIQDKTLEEFNAVYGTKVDGLLSLLAALNAENIKLL 2171 (2582)
T ss_pred             CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCC--CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Confidence            4788999999999999999998 333689999999999877  78889999999999999999             4689


Q ss_pred             EEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200           96 LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus        96 v~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      |++||.++..+.+++..|+++|++++.+++.++.++.  +++|++|.||.++|+|.
T Consensus      2172 V~~SSvag~~G~~gqs~YaaAkaaL~~la~~la~~~~--~irV~sI~wG~wdtgm~ 2225 (2582)
T TIGR02813      2172 ALFSSAAGFYGNTGQSDYAMSNDILNKAALQLKALNP--SAKVMSFNWGPWDGGMV 2225 (2582)
T ss_pred             EEEechhhcCCCCCcHHHHHHHHHHHHHHHHHHHHcC--CcEEEEEECCeecCCcc
Confidence            9999999999999999999999999999999999986  49999999999999875

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PRK12367 short chain dehydrogenase; Provisional

Probab=99.71  E-value=5.7e-16  Score=115.09  Aligned_cols=137  Identities=15%  Similarity=0.082  Sum_probs=97.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.......  ....  ...++.+|+++.+++...     ++++|++|||||....     .+.+.+
T Consensus        33 ~l~~~G~~Vi~~~r~~~~~~~~--~~~~--~~~~~~~D~~~~~~~~~~-----~~~iDilVnnAG~~~~-----~~~~~~   98 (245)
T PRK12367         33 AFRAKGAKVIGLTHSKINNSES--NDES--PNEWIKWECGKEESLDKQ-----LASLDVLILNHGINPG-----GRQDPE   98 (245)
T ss_pred             HHHHCCCEEEEEECCchhhhhh--hccC--CCeEEEeeCCCHHHHHHh-----cCCCCEEEECCccCCc-----CCCCHH
Confidence            3678999999999986322111  1111  235789999999887643     3569999999997432     235788


Q ss_pred             HHHHhhheeec--------------c-----ee-EEEeccccccccCccchhhHhhHHHHHHH---HHHHHHHhcCCCeE
Q 042200           81 KVKRVMIMVVF--------------L-----GV-LLFTANLATETIGEALYDYLMSKYAVLGL---MKNLCVELGQYDIR  137 (181)
Q Consensus        81 ~~~~~~~~n~~--------------~-----~~-iv~iss~~~~~~~~~~~~y~~sK~a~~~l---~~~la~~~~~~~i~  137 (181)
                      +|+..+++|+.              .     +. ++..+|.++..+ +....|++||+++..+   .+.++.++.+.+++
T Consensus        99 ~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-~~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~  177 (245)
T PRK12367         99 NINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-ALSPSYEISKRLIGQLVSLKKNLLDKNERKKLI  177 (245)
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-CCCchhHHHHHHHHHHHHHHHHHHHhhcccccE
Confidence            99999999998              1     33 444455555443 4567899999998654   34555566788999


Q ss_pred             EEEEecCcccCcccc
Q 042200          138 VNSIAHIVSATPFFC  152 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~  152 (181)
                      |+.+.||.++|++..
T Consensus       178 v~~~~pg~~~t~~~~  192 (245)
T PRK12367        178 IRKLILGPFRSELNP  192 (245)
T ss_pred             EEEecCCCcccccCc
Confidence            999999999998743

>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.68  E-value=3.8e-16  Score=109.58  Aligned_cols=140  Identities=14%  Similarity=0.160  Sum_probs=110.7

Q ss_pred             cccCCC-EEEEeecchHHHHHH---HhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRA-KVIIADVQDDLCRAL---CKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~---~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|+ .|++++|+.+..+..   .+.+... .++.++.+|+++.+++.++++.  ..++++|+|||++|....  ..+
T Consensus        20 l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~ag~~~~--~~~   97 (180)
T smart00822       20 LAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLGPLRGVIHAAGVLDD--GLL   97 (180)
T ss_pred             HHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCeeEEEEccccCCc--ccc
Confidence            567886 588888875432221   1222221 4688899999999999999888  557899999999998765  566


Q ss_pred             ccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           75 LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.+.++++..++.|+.             .++++++||..+..+.+....|+++|++++.+++.++    ..|+++..+
T Consensus        98 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~~~~~~y~~sk~~~~~~~~~~~----~~~~~~~~~  173 (180)
T smart00822       98 ANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGNPGQANYAAANAFLDALAAHRR----ARGLPATSI  173 (180)
T ss_pred             ccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCCCCchhhHHHHHHHHHHHHHHH----hcCCceEEE
Confidence            67788999999999987             4789999999998888999999999999999887654    457889999


Q ss_pred             ecCccc
Q 042200          142 AHIVSA  147 (181)
Q Consensus       142 ~Pg~v~  147 (181)
                      .||++.
T Consensus       174 ~~g~~~  179 (180)
T smart00822      174 NWGAWA  179 (180)
T ss_pred             eecccc
Confidence            999875

It uses NADPH to reduce the keto group to a hydroxy group.

>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain

Probab=99.64  E-value=1.7e-15  Score=107.63  Aligned_cols=138  Identities=18%  Similarity=0.273  Sum_probs=97.9

Q ss_pred             cccCCC-EEEEeecch---HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRA-KVIIADVQD---DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|. +|++++|..   ....+..+++... .++.++.||++|.+++.+++++  .+++++++|||+||....  ..+
T Consensus        20 La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~--~~~   97 (181)
T PF08659_consen   20 LAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGPIDGVIHAAGVLAD--API   97 (181)
T ss_dssp             HHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-EEEEEE---------B-G
T ss_pred             HHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCCcceeeeeeeeecc--ccc
Confidence            456665 699999982   2333445555443 5899999999999999999999  667899999999999887  888


Q ss_pred             ccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           75 LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.+.+.++.++...+.             ...+|.+||+++..+.+++..|+++.+.++.|++..+..    |.++.+|
T Consensus        98 ~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~~gq~~YaaAN~~lda~a~~~~~~----g~~~~sI  173 (181)
T PF08659_consen   98 QDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGGPGQSAYAAANAFLDALARQRRSR----GLPAVSI  173 (181)
T ss_dssp             CC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT-TTBHHHHHHHHHHHHHHHHHHHT----TSEEEEE
T ss_pred             ccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccCcchHhHHHHHHHHHHHHHHHHhC----CCCEEEE
Confidence            89999999999888776             568999999999999999999999999999998865542    5567777


Q ss_pred             ecCc
Q 042200          142 AHIV  145 (181)
Q Consensus       142 ~Pg~  145 (181)
                      .-|.
T Consensus       174 ~wg~  177 (181)
T PF08659_consen  174 NWGA  177 (181)
T ss_dssp             EE-E
T ss_pred             Eccc
Confidence            6554

It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=99.61  E-value=6.3e-14  Score=108.54  Aligned_cols=152  Identities=11%  Similarity=-0.025  Sum_probs=109.0

Q ss_pred             cCCCEEEEeecchHHH------------HHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccC
Q 042200            4 QHRAKVIIADVQDDLC------------RALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~------------~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~   68 (181)
                      ++|++|+++++..+..            +.+.+.+... ..+..+.||+++.+++++++++  .++|++|+||||+|...
T Consensus        64 ~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~  143 (398)
T PRK13656         64 GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPR  143 (398)
T ss_pred             HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCC
Confidence            7899988888532211            1122222221 2577899999999999999999  77899999999999874


Q ss_pred             CCC-------------------CCcc-------------cCCHHHHHHhh----------------heeec--ceeEEEe
Q 042200           69 NMD-------------------RTTL-------------DTDNEKVKRVM----------------IMVVF--LGVLLFT   98 (181)
Q Consensus        69 ~~~-------------------~~~~-------------~~~~~~~~~~~----------------~~n~~--~~~iv~i   98 (181)
                      ...                   ..+.             ..+.++++.++                ...++  ++++|.+
T Consensus       144 r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~g~~~va~  223 (398)
T PRK13656        144 RTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPATEEEIADTVKVMGGEDWELWIDALDEAGVLAEGAKTVAY  223 (398)
T ss_pred             CCCcccCceeecccccccccccCCcccccccceeEEEEeeCCHHHHHHHHHhhccchHHHHHHHHHhcccccCCcEEEEE
Confidence            310                   0000             12222332221                22222  6789999


Q ss_pred             ccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhc
Q 042200           99 ANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus        99 ss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~  155 (181)
                      |........|.+  ..-+.+|++|+.-++.|+.+++++|||+|++++|.+.|......+
T Consensus       224 TY~G~~~t~p~Y~~g~mG~AKa~LE~~~r~La~~L~~~giran~i~~g~~~T~Ass~Ip  282 (398)
T PRK13656        224 SYIGPELTHPIYWDGTIGKAKKDLDRTALALNEKLAAKGGDAYVSVLKAVVTQASSAIP  282 (398)
T ss_pred             ecCCcceeecccCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhcCC
Confidence            998888887766  378999999999999999999999999999999999997655544

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=99.59  E-value=6.2e-14  Score=110.60  Aligned_cols=134  Identities=19%  Similarity=0.104  Sum_probs=97.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.++++.......  ..+..+.+|++|.+++.+.+.     ++|++|||||....     .+.+.++
T Consensus       198 La~~G~~Vi~l~r~~~~l~~~~~~~~--~~v~~v~~Dvsd~~~v~~~l~-----~IDiLInnAGi~~~-----~~~s~e~  265 (406)
T PRK07424        198 LHQQGAKVVALTSNSDKITLEINGED--LPVKTLHWQVGQEAALAELLE-----KVDILIINHGINVH-----GERTPEA  265 (406)
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHhhcC--CCeEEEEeeCCCHHHHHHHhC-----CCCEEEECCCcCCC-----CCCCHHH
Confidence            67899999999998776654333222  246788999999988776554     69999999997532     2567889


Q ss_pred             HHHhhheeec----------------c-----eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           82 VKRVMIMVVF----------------L-----GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        82 ~~~~~~~n~~----------------~-----~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +++.+++|+.                +     +.+|++|+ ++ ...+..+.|++||+|+.+|+. +.++..  ++.+..
T Consensus       266 ~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ss-a~-~~~~~~~~Y~ASKaAl~~l~~-l~~~~~--~~~I~~  340 (406)
T PRK07424        266 INKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSE-AE-VNPAFSPLYELSKRALGDLVT-LRRLDA--PCVVRK  340 (406)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcc-cc-ccCCCchHHHHHHHHHHHHHH-HHHhCC--CCceEE
Confidence            9999999999                1     23566554 33 333445679999999999974 554433  567777


Q ss_pred             EecCcccCcccc
Q 042200          141 IAHIVSATPFFC  152 (181)
Q Consensus       141 i~Pg~v~t~~~~  152 (181)
                      +.||.++|++..
T Consensus       341 i~~gp~~t~~~~  352 (406)
T PRK07424        341 LILGPFKSNLNP  352 (406)
T ss_pred             EEeCCCcCCCCc
Confidence            889999998753

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=99.57  E-value=4.1e-14  Score=109.29  Aligned_cols=133  Identities=10%  Similarity=0.069  Sum_probs=99.2

Q ss_pred             cccCC--CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHR--AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|  ++|++++|+..........+.. .++.++.+|++|.+++.++++     .+|+|||+||....   ...+.++
T Consensus        24 L~~~g~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~v~~Dl~d~~~l~~~~~-----~iD~Vih~Ag~~~~---~~~~~~~   94 (324)
T TIGR03589        24 LLENYNPKKIIIYSRDELKQWEMQQKFPA-PCLRFFIGDVRDKERLTRALR-----GVDYVVHAAALKQV---PAAEYNP   94 (324)
T ss_pred             HHHhCCCcEEEEEcCChhHHHHHHHHhCC-CcEEEEEccCCCHHHHHHHHh-----cCCEEEECcccCCC---chhhcCH
Confidence            55665  7899999986655444333322 368899999999999988887     38999999997532   1112222


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcc
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS  146 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v  146 (181)
                         ...+++|+.             .++||++||.....   +...|+++|++.+.+++.++.+...+|+++++++||.+
T Consensus        95 ---~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~~~---p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v  168 (324)
T TIGR03589        95 ---FECIRTNINGAQNVIDAAIDNGVKRVVALSTDKAAN---PINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNV  168 (324)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCCCC---CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecce
Confidence               345555555             35899999865433   35679999999999999998888888999999999999


Q ss_pred             cCc
Q 042200          147 ATP  149 (181)
Q Consensus       147 ~t~  149 (181)
                      .++
T Consensus       169 ~G~  171 (324)
T TIGR03589       169 VGS  171 (324)
T ss_pred             eCC
Confidence            986

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=99.53  E-value=9.1e-14  Score=108.33  Aligned_cols=141  Identities=10%  Similarity=-0.054  Sum_probs=101.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+..........+....++.++.+|+++.+++.++++.   .++|+|||+||....      ..+.+
T Consensus        23 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~vih~A~~~~~------~~~~~   93 (349)
T TIGR02622        23 WLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE---FKPEIVFHLAAQPLV------RKSYA   93 (349)
T ss_pred             HHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh---cCCCEEEECCccccc------ccchh
Confidence            367899999999997654433322221112577899999999999999985   358999999995432      12333


Q ss_pred             HHHHhhheeec--------------ceeEEEeccccccc------------cCccchhhHhhHHHHHHHHHHHHHHhcC-
Q 042200           81 KVKRVMIMVVF--------------LGVLLFTANLATET------------IGEALYDYLMSKYAVLGLMKNLCVELGQ-  133 (181)
Q Consensus        81 ~~~~~~~~n~~--------------~~~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~l~~~la~~~~~-  133 (181)
                      ++...+++|+.              .+++|++||...+.            +..+...|+.+|.+.+.+++.++.++.+ 
T Consensus        94 ~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~  173 (349)
T TIGR02622        94 DPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGGHDPYSSSKACAELVIASYRSSFFGV  173 (349)
T ss_pred             CHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCCCCcchhHHHHHHHHHHHHHHHhhcc
Confidence            44555566655              24899999864331            1234568999999999999999988855 


Q ss_pred             ---CCeEEEEEecCcccCcc
Q 042200          134 ---YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ---~~i~v~~i~Pg~v~t~~  150 (181)
                         +|++++.++|+.+.+|.
T Consensus       174 ~~~~~i~~~~lR~~~vyGp~  193 (349)
T TIGR02622       174 ANFHGIKIASARAGNVIGGG  193 (349)
T ss_pred             cccCCCcEEEEccCcccCCC
Confidence               48999999999999873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=99.45  E-value=1.5e-12  Score=105.79  Aligned_cols=135  Identities=10%  Similarity=0.066  Sum_probs=96.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC----------CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS----------DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~   70 (181)
                      +|+++|++|++++|+.++++.+.+++..          ..++.++.+|+++.+++.+.+.     ++|+||||+|.... 
T Consensus        99 ~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLg-----giDiVVn~AG~~~~-  172 (576)
T PLN03209         99 ELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALG-----NASVVICCIGASEK-  172 (576)
T ss_pred             HHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhc-----CCCEEEEccccccc-
Confidence            3678999999999999888776554321          0258899999999998877554     58999999997532 


Q ss_pred             CCCcccCCHHHHHHhhheeec-------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF-------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                        .+.     ++...+.+|+.             .++||++||.++. .+.+.. .|. +|+++..+.+.+..++...||
T Consensus       173 --~v~-----d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~-~~~-sk~~~~~~KraaE~~L~~sGI  243 (576)
T PLN03209        173 --EVF-----DVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAA-ILN-LFWGVLCWKRKAEEALIASGL  243 (576)
T ss_pred             --ccc-----chhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCcccc-chh-hHHHHHHHHHHHHHHHHHcCC
Confidence              111     12233333322             4799999998764 333222 243 677777888888888888999


Q ss_pred             EEEEEecCcccCcc
Q 042200          137 RVNSIAHIVSATPF  150 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~  150 (181)
                      +++.|+||++.|++
T Consensus       244 rvTIVRPG~L~tp~  257 (576)
T PLN03209        244 PYTIVRPGGMERPT  257 (576)
T ss_pred             CEEEEECCeecCCc
Confidence            99999999998875

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=99.43  E-value=1.6e-12  Score=100.25  Aligned_cols=137  Identities=10%  Similarity=0.093  Sum_probs=97.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHc--CCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEF--DSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~--~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+...........  ... .++.++.+|+++.+++.++++     ++|+||||||....      ..
T Consensus        24 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vih~A~~~~~------~~   92 (325)
T PLN02989         24 LLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAID-----GCETVFHTASPVAI------TV   92 (325)
T ss_pred             HHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHc-----CCCEEEEeCCCCCC------CC
Confidence            36789999999988865544332211  111 368899999999999988887     38999999996432      12


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEeccccccccCc----------------------cchhhHhhHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATETIGE----------------------ALYDYLMSKYAVL  121 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~~----------------------~~~~y~~sK~a~~  121 (181)
                      +.+.+...+++|+.              .++||++||..++.+..                      ....|+.+|.+.+
T Consensus        93 ~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E  172 (325)
T PLN02989         93 KTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTNPSFAEERKQWYVLSKTLAE  172 (325)
T ss_pred             CCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCchhHhcccccchHHHHHHHH
Confidence            22334455555544              35899999976653211                      1246999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+++.++.++   |++++.++|+.+.+|..
T Consensus       173 ~~~~~~~~~~---~~~~~ilR~~~vyGp~~  199 (325)
T PLN02989        173 DAAWRFAKDN---EIDLIVLNPGLVTGPIL  199 (325)
T ss_pred             HHHHHHHHHc---CCeEEEEcCCceeCCCC
Confidence            9999887765   79999999999999864

>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]

Probab=99.38  E-value=3e-12  Score=92.98  Aligned_cols=146  Identities=18%  Similarity=0.174  Sum_probs=120.6

Q ss_pred             EEEEeecchHHHHHHHhHcCCC-----CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc------
Q 042200            8 KVIIADVQDDLCRALCKEFDSD-----ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT------   74 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~------   74 (181)
                      .+++++|+-++.++.++.+.+-     .++.++.+|+++-.++.++..+  ++|.++|.+..|||++..  ..+      
T Consensus        34 tl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~--~gi~w~~av  111 (341)
T KOG1478|consen   34 TLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPN--PGINWKAAV  111 (341)
T ss_pred             EEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCC--CcccHHHHH
Confidence            5889999999999888877541     6899999999999999999999  889999999999998765  111      


Q ss_pred             ---------------------ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccC---------
Q 042200           75 ---------------------LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIG---------  107 (181)
Q Consensus        75 ---------------------~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~---------  107 (181)
                                           ...+.|++..+++.|++                 ...+|.+||..+.-..         
T Consensus       112 f~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~  191 (341)
T KOG1478|consen  112 FGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHS  191 (341)
T ss_pred             HHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhh
Confidence                                 13466888999999998                 4589999997764321         


Q ss_pred             ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhc
Q 042200          108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus       108 ~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~  155 (181)
                      .+--+|..||.+.+-|.-.+-+.+.+.|+.-++++||+..|.++..+.
T Consensus       192 kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~~~~~~l  239 (341)
T KOG1478|consen  192 KGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTNSFSEYL  239 (341)
T ss_pred             cCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecchhhhhh
Confidence            355679999999999999999999999999999999999887765543

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=99.38  E-value=1.3e-11  Score=96.45  Aligned_cols=142  Identities=15%  Similarity=0.161  Sum_probs=97.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+..........+....++.++.+|+++.+++.+++.     .+|+|||+||..... ......+.+
T Consensus        29 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~Vih~A~~~~~~-~~~~~~~~~  102 (353)
T PLN02896         29 LLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVK-----GCDGVFHVAASMEFD-VSSDHNNIE  102 (353)
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHc-----CCCEEEECCccccCC-ccccccchh
Confidence            36789999999999876665554444322368899999999999888876     379999999976431 111112222


Q ss_pred             HH--HHhhheeec--------------ceeEEEeccccccccC-------------------------ccchhhHhhHHH
Q 042200           81 KV--KRVMIMVVF--------------LGVLLFTANLATETIG-------------------------EALYDYLMSKYA  119 (181)
Q Consensus        81 ~~--~~~~~~n~~--------------~~~iv~iss~~~~~~~-------------------------~~~~~y~~sK~a  119 (181)
                      .+  .+.++.|+.              .+++|++||...+...                         ++...|+.||.+
T Consensus       103 ~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~  182 (353)
T PLN02896        103 EYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRAVVDETCQTPIDHVWNTKASGWVYVLSKLL  182 (353)
T ss_pred             hhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCCccCcccCCcHHHhhccCCCCccHHHHHHH
Confidence            21  223333322              2479999996554211                         011379999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          120 VLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       120 ~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+.+++.++.++   |+++..++|+.+..|..
T Consensus       183 ~E~~~~~~~~~~---~~~~~~lR~~~vyGp~~  211 (353)
T PLN02896        183 TEEAAFKYAKEN---GIDLVSVITTTVAGPFL  211 (353)
T ss_pred             HHHHHHHHHHHc---CCeEEEEcCCcccCCCc
Confidence            999998887766   79999999999999853

>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]

Probab=99.36  E-value=1.9e-11  Score=92.79  Aligned_cols=149  Identities=13%  Similarity=0.115  Sum_probs=101.3

Q ss_pred             CcccCCCEEEEeecchHHHHH--HHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCC----C
Q 042200            1 VFIQHRAKVIIADVQDDLCRA--LCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDR----T   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~----~   73 (181)
                      +|+++||.|..+.|+++..+.  .+..+++. .+...+..|+++.+++..+++     +.|+|+|.|........    .
T Consensus        25 ~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~-----gcdgVfH~Asp~~~~~~~~e~~   99 (327)
T KOG1502|consen   25 LLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAID-----GCDGVFHTASPVDFDLEDPEKE   99 (327)
T ss_pred             HHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHh-----CCCEEEEeCccCCCCCCCcHHh
Confidence            488999999999999876544  46777765 579999999999999999999     38999999998655111    1


Q ss_pred             cccCCHHHHHHhhheeec---ceeEEEeccccccccC-c-----------cc--hhhHhhHHHHHHHHHHHH----HHhc
Q 042200           74 TLDTDNEKVKRVMIMVVF---LGVLLFTANLATETIG-E-----------AL--YDYLMSKYAVLGLMKNLC----VELG  132 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---~~~iv~iss~~~~~~~-~-----------~~--~~y~~sK~a~~~l~~~la----~~~~  132 (181)
                      +.+...+...++++....   -.+||++||.++.... +           .|  ..|+..+..+..++|.++    -+++
T Consensus       100 li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa  179 (327)
T KOG1502|consen  100 LIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFA  179 (327)
T ss_pred             hhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence            222222333344333333   3789999999987643 1           11  124444444444444443    3333


Q ss_pred             -CCCeEEEEEecCcccCcccchh
Q 042200          133 -QYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       133 -~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                       +.|+.+.+|.|++|..|...+.
T Consensus       180 ~e~~~~lv~inP~lV~GP~l~~~  202 (327)
T KOG1502|consen  180 KENGLDLVTINPGLVFGPGLQPS  202 (327)
T ss_pred             HhCCccEEEecCCceECCCcccc
Confidence             3479999999999999976653

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=99.35  E-value=1.6e-11  Score=94.69  Aligned_cols=136  Identities=10%  Similarity=0.046  Sum_probs=93.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcC--C-CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFD--S-DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~--~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|+++.|+....+.......  . ...+.++.+|+++.+++.++++     ++|+|||+||....  . ..+ 
T Consensus        24 ~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~vih~A~~~~~--~-~~~-   94 (322)
T PLN02986         24 LLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIE-----GCDAVFHTASPVFF--T-VKD-   94 (322)
T ss_pred             HHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHh-----CCCEEEEeCCCcCC--C-CCC-
Confidence            367899999999988654433222111  1 1368889999999999988887     38999999997432  1 111 


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEeccccccc-cCc---------------------cchhhHhhHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATET-IGE---------------------ALYDYLMSKYAVL  121 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~-~~~---------------------~~~~y~~sK~a~~  121 (181)
                      +   ....++.|+.              .++||++||.++.. +.+                     +...|+.+|.+.+
T Consensus        95 ~---~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE  171 (322)
T PLN02986         95 P---QTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETKNWYPLSKILAE  171 (322)
T ss_pred             c---hhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccccchHHHHHHHH
Confidence            1   1122222222              24899999976532 110                     1356999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+++.+..++   |++++.++|+.+.+|..
T Consensus       172 ~~~~~~~~~~---~~~~~~lrp~~v~Gp~~  198 (322)
T PLN02986        172 NAAWEFAKDN---GIDMVVLNPGFICGPLL  198 (322)
T ss_pred             HHHHHHHHHh---CCeEEEEcccceeCCCC
Confidence            9888887765   79999999999999864

>PLN00198 anthocyanidin reductase; Provisional

Probab=99.34  E-value=1.6e-11  Score=95.29  Aligned_cols=134  Identities=12%  Similarity=0.115  Sum_probs=91.6

Q ss_pred             cccCCCEEEEeecchHHHHHH--HhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRAL--CKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~--~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.......  ...+....++.++.+|++|.+++.++++     ++|+|||+|+....  .  ...+ 
T Consensus        29 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A~~~~~--~--~~~~-   98 (338)
T PLN00198         29 LLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIA-----GCDLVFHVATPVNF--A--SEDP-   98 (338)
T ss_pred             HHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHh-----cCCEEEEeCCCCcc--C--CCCh-
Confidence            678999999888875433221  1122211358889999999999888877     37999999995321  1  1111 


Q ss_pred             HHHHHhhheeec--------------ceeEEEecccccccc------------------------CccchhhHhhHHHHH
Q 042200           80 EKVKRVMIMVVF--------------LGVLLFTANLATETI------------------------GEALYDYLMSKYAVL  121 (181)
Q Consensus        80 ~~~~~~~~~n~~--------------~~~iv~iss~~~~~~------------------------~~~~~~y~~sK~a~~  121 (181)
                        +...+++|+.              .+++|++||.+.+..                        .++...|+.||.+.+
T Consensus        99 --~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E  176 (338)
T PLN00198         99 --ENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAE  176 (338)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCchhhhhhcCCccchhHHHHHHHH
Confidence              1222222322              258999999765431                        123456999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .+++.++.++   |++++.++|+.+.+|.
T Consensus       177 ~~~~~~~~~~---~~~~~~~R~~~vyGp~  202 (338)
T PLN00198        177 KAAWKFAEEN---NIDLITVIPTLMAGPS  202 (338)
T ss_pred             HHHHHHHHhc---CceEEEEeCCceECCC
Confidence            9998887765   7999999999999985

>PLN02650 dihydroflavonol-4-reductase

Probab=99.30  E-value=2.8e-11  Score=94.41  Aligned_cols=136  Identities=13%  Similarity=0.135  Sum_probs=93.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcC--CC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFD--SD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~--~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+..........  .. .++.++.+|+++.+.+..+++     .+|+|||+|+....  ..  ..
T Consensus        24 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~-----~~d~ViH~A~~~~~--~~--~~   94 (351)
T PLN02650         24 RLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIR-----GCTGVFHVATPMDF--ES--KD   94 (351)
T ss_pred             HHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHh-----CCCEEEEeCCCCCC--CC--CC
Confidence            367899999999998655544322211  11 257889999999999888887     37999999986432  11  01


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEeccccccccC----c------------------cchhhHhhHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATETIG----E------------------ALYDYLMSKYAVL  121 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~----~------------------~~~~y~~sK~a~~  121 (181)
                      +   ....+++|+.              .++||++||.....+.    +                  +...|+.||.+.+
T Consensus        95 ~---~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E  171 (351)
T PLN02650         95 P---ENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAE  171 (351)
T ss_pred             c---hhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhhhhccccccchHHHHHHHHH
Confidence            1   1222333333              2479999987543211    0                  1136999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+++.++.++   |++++.++|+.+.+|..
T Consensus       172 ~~~~~~~~~~---gi~~~ilRp~~v~Gp~~  198 (351)
T PLN02650        172 KAAWKYAAEN---GLDFISIIPTLVVGPFI  198 (351)
T ss_pred             HHHHHHHHHc---CCeEEEECCCceECCCC
Confidence            9999888775   89999999999999864

>PLN02572 UDP-sulfoquinovose synthase

Probab=99.27  E-value=9.6e-11  Score=94.10  Aligned_cols=111  Identities=14%  Similarity=-0.032  Sum_probs=81.6

Q ss_pred             ceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec------------c--eeEE
Q 042200           31 LISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------L--GVLL   96 (181)
Q Consensus        31 ~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------~--~~iv   96 (181)
                      ++.++.+|++|.+++.++++.   .++|+|||+|+....   .....+.+++...+++|+.            +  .++|
T Consensus       114 ~v~~v~~Dl~d~~~v~~~l~~---~~~D~ViHlAa~~~~---~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V  187 (442)
T PLN02572        114 EIELYVGDICDFEFLSEAFKS---FEPDAVVHFGEQRSA---PYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLV  187 (442)
T ss_pred             cceEEECCCCCHHHHHHHHHh---CCCCEEEECCCcccC---hhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence            588999999999999999984   358999999976432   2233334444555555555            2  4799


Q ss_pred             Eecccccccc------------------------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           97 FTANLATETI------------------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        97 ~iss~~~~~~------------------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ++||...+..                        ..+...|+.+|.+.+.+++.++..+   |+.+..++|+.+..|.
T Consensus       188 ~~SS~~vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~---gl~~v~lR~~~vyGp~  262 (442)
T PLN02572        188 KLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVR  262 (442)
T ss_pred             EEecceecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhc---CCCEEEEecccccCCC
Confidence            9998754321                        1123579999999999998877765   8999999999999885

>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]

Probab=99.25  E-value=4.4e-11  Score=89.14  Aligned_cols=135  Identities=12%  Similarity=0.104  Sum_probs=96.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|++.|++|+++|.........+...    ...++..|+.|.+.+.++|++   .++|.|||.||....  +...+.+.+
T Consensus        19 ~Ll~~G~~vvV~DNL~~g~~~~v~~~----~~~f~~gDi~D~~~L~~vf~~---~~idaViHFAa~~~V--gESv~~Pl~   89 (329)
T COG1087          19 QLLKTGHEVVVLDNLSNGHKIALLKL----QFKFYEGDLLDRALLTAVFEE---NKIDAVVHFAASISV--GESVQNPLK   89 (329)
T ss_pred             HHHHCCCeEEEEecCCCCCHHHhhhc----cCceEEeccccHHHHHHHHHh---cCCCEEEECcccccc--chhhhCHHH
Confidence            47899999999998665555444432    157999999999999999997   569999999998766  444445555


Q ss_pred             HHHHhhheeec---------ceeEEEeccccccccCc------------cchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           81 KVKRVMIMVVF---------LGVLLFTANLATETIGE------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        81 ~~~~~~~~n~~---------~~~iv~iss~~~~~~~~------------~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+++.+-..+.         -..||+ ||.++.++.|            +..+|+.||.+.+.+.+.++..+   ++++.
T Consensus        90 Yy~NNv~gTl~Ll~am~~~gv~~~vF-SStAavYG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~d~~~a~---~~~~v  165 (329)
T COG1087          90 YYDNNVVGTLNLIEAMLQTGVKKFIF-SSTAAVYGEPTTSPISETSPLAPINPYGRSKLMSEEILRDAAKAN---PFKVV  165 (329)
T ss_pred             HHhhchHhHHHHHHHHHHhCCCEEEE-ecchhhcCCCCCcccCCCCCCCCCCcchhHHHHHHHHHHHHHHhC---CCcEE
Confidence            55444322221         235555 6666666543            55689999999999999999888   46777


Q ss_pred             EEecCcccC
Q 042200          140 SIAHIVSAT  148 (181)
Q Consensus       140 ~i~Pg~v~t  148 (181)
                      .++=+.+..
T Consensus       166 ~LRYFN~aG  174 (329)
T COG1087         166 ILRYFNVAG  174 (329)
T ss_pred             EEEeccccc
Confidence            766554443

>PLN02214 cinnamoyl-CoA reductase

Probab=99.25  E-value=7.5e-11  Score=91.80  Aligned_cols=131  Identities=11%  Similarity=0.105  Sum_probs=92.9

Q ss_pred             CcccCCCEEEEeecchHHHHH-HHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRA-LCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.... ....+... .++.++.+|+++.+++.++++     ++|+|||+||....  .      
T Consensus        29 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vih~A~~~~~--~------   95 (342)
T PLN02214         29 ILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAID-----GCDGVFHTASPVTD--D------   95 (342)
T ss_pred             HHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHh-----cCCEEEEecCCCCC--C------
Confidence            367899999999998654322 12222221 258889999999999988887     38999999996422  1      


Q ss_pred             HHHHHHhhheeec-------------ceeEEEeccccccccCc---------------------cchhhHhhHHHHHHHH
Q 042200           79 NEKVKRVMIMVVF-------------LGVLLFTANLATETIGE---------------------ALYDYLMSKYAVLGLM  124 (181)
Q Consensus        79 ~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~---------------------~~~~y~~sK~a~~~l~  124 (181)
                         +...++.|+.             .++||++||..+..+.+                     +...|+.+|.+.+.++
T Consensus        96 ---~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~~~~~p~~~Y~~sK~~aE~~~  172 (342)
T PLN02214         96 ---PEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLDFCKNTKNWYCYGKMVAEQAA  172 (342)
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChhhccccccHHHHHHHHHHHHH
Confidence               1222333332             35899999975443210                     2346999999999999


Q ss_pred             HHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          125 KNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       125 ~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +.++.++   |+++..++|+.+..|.
T Consensus       173 ~~~~~~~---g~~~v~lRp~~vyGp~  195 (342)
T PLN02214        173 WETAKEK---GVDLVVLNPVLVLGPP  195 (342)
T ss_pred             HHHHHHc---CCcEEEEeCCceECCC
Confidence            8887766   7999999999999985

>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional

Probab=99.22  E-value=8.6e-11  Score=91.74  Aligned_cols=136  Identities=10%  Similarity=0.030  Sum_probs=91.4

Q ss_pred             cccCCCEEE-EeecchHH--HHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVI-IADVQDDL--CRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv-~~~r~~~~--~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|+ +++|....  .... ..+.....+.++.+|++|.+++.++++.   .++|+|||+||....      ..+
T Consensus        21 L~~~g~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~Vih~A~~~~~------~~~   90 (355)
T PRK10217         21 IINETSDAVVVVDKLTYAGNLMSL-APVAQSERFAFEKVDICDRAELARVFTE---HQPDCVMHLAAESHV------DRS   90 (355)
T ss_pred             HHHcCCCEEEEEecCccccchhhh-hhcccCCceEEEECCCcChHHHHHHHhh---cCCCEEEECCcccCc------chh
Confidence            678898744 55554221  1111 1111112577889999999999999884   358999999996532      122


Q ss_pred             HHHHHHhhheeec----------c------------eeEEEeccccccc-------------cCccchhhHhhHHHHHHH
Q 042200           79 NEKVKRVMIMVVF----------L------------GVLLFTANLATET-------------IGEALYDYLMSKYAVLGL  123 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------~------------~~iv~iss~~~~~-------------~~~~~~~y~~sK~a~~~l  123 (181)
                      .+.+...+++|+.          .            .++|++||...+.             +..+...|+.||.+.+.+
T Consensus        91 ~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~E~~~~~p~s~Y~~sK~~~e~~  170 (355)
T PRK10217         91 IDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFFTETTPYAPSSPYSASKASSDHL  170 (355)
T ss_pred             hhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCcCCCCCCCCCChhHHHHHHHHHH
Confidence            2334455555554          1            3788898854321             123466899999999999


Q ss_pred             HHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          124 MKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       124 ~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ++.++.++   ++++..++|+.+..|.
T Consensus       171 ~~~~~~~~---~~~~~i~r~~~v~Gp~  194 (355)
T PRK10217        171 VRAWLRTY---GLPTLITNCSNNYGPY  194 (355)
T ss_pred             HHHHHHHh---CCCeEEEeeeeeeCCC
Confidence            99998876   7889999999888874

>PLN02583 cinnamoyl-CoA reductase

Probab=99.21  E-value=3.2e-10  Score=86.61  Aligned_cols=135  Identities=10%  Similarity=0.030  Sum_probs=92.1

Q ss_pred             CcccCCCEEEEeecch--HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQD--DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|+++.|+.  .........+... .++.++.+|++|.+++..++.     ..|+|+|.++....  .     
T Consensus        25 ~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~-----~~d~v~~~~~~~~~--~-----   92 (297)
T PLN02583         25 RLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALK-----GCSGLFCCFDPPSD--Y-----   92 (297)
T ss_pred             HHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHc-----CCCEEEEeCccCCc--c-----
Confidence            3788999999999853  2333333444221 368889999999999887776     36889987764322  1     


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEeccccccccC-c-----------cc----------hhhHhhHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATETIG-E-----------AL----------YDYLMSKYAVL  121 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~-~-----------~~----------~~y~~sK~a~~  121 (181)
                      + ..++..+++|+.              .++||++||.++.... +           .+          ..|+.||...+
T Consensus        93 ~-~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE  171 (297)
T PLN02583         93 P-SYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKLWHALAKTLSE  171 (297)
T ss_pred             c-ccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhcccHHHHHHHHHH
Confidence            1 123445555554              2589999998664311 0           01          15899999998


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .++..++.+.   |+++++|+|+.+.+|..
T Consensus       172 ~~~~~~~~~~---gi~~v~lrp~~v~Gp~~  198 (297)
T PLN02583        172 KTAWALAMDR---GVNMVSINAGLLMGPSL  198 (297)
T ss_pred             HHHHHHHHHh---CCcEEEEcCCcccCCCC
Confidence            8888776654   89999999999998853

>PLN02686 cinnamoyl-CoA reductase

Probab=99.20  E-value=3.6e-10  Score=88.81  Aligned_cols=141  Identities=16%  Similarity=0.163  Sum_probs=98.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC-------CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCC--
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS-------DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMD--   71 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~--   71 (181)
                      +|+++|++|+++.|+.+..+.. ..+..       ...+.++.+|++|.+++.++++.     +|.|||.|+......  
T Consensus        72 ~L~~~G~~V~~~~r~~~~~~~l-~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~-----~d~V~hlA~~~~~~~~~  145 (367)
T PLN02686         72 RLLRHGYSVRIAVDTQEDKEKL-REMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDG-----CAGVFHTSAFVDPAGLS  145 (367)
T ss_pred             HHHHCCCEEEEEeCCHHHHHHH-HHHhhhccccccCCceEEEEcCCCCHHHHHHHHHh-----ccEEEecCeeecccccc
Confidence            3678999999988887655443 22210       02478899999999999988873     688999988754310  


Q ss_pred             ---CCcccCCHHHHHHhhheeec---ceeEEEeccccc-cccC----------------------ccchhhHhhHHHHHH
Q 042200           72 ---RTTLDTDNEKVKRVMIMVVF---LGVLLFTANLAT-ETIG----------------------EALYDYLMSKYAVLG  122 (181)
Q Consensus        72 ---~~~~~~~~~~~~~~~~~n~~---~~~iv~iss~~~-~~~~----------------------~~~~~y~~sK~a~~~  122 (181)
                         ..+.+...+.+.+.++....   -.++|++||..+ ..+.                      .+...|+.+|.+.+.
T Consensus       146 ~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~  225 (367)
T PLN02686        146 GYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESFCRDNKLWYALGKLKAEK  225 (367)
T ss_pred             cccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhhcccccchHHHHHHHHHH
Confidence               12223445566666665433   247899998642 1110                      023469999999999


Q ss_pred             HHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          123 LMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       123 l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +++.++.++   |+++++++|+.+.+|.
T Consensus       226 ~~~~~~~~~---gl~~v~lRp~~vyGp~  250 (367)
T PLN02686        226 AAWRAARGK---GLKLATICPALVTGPG  250 (367)
T ss_pred             HHHHHHHhc---CceEEEEcCCceECCC
Confidence            998887764   8999999999999985

>PLN02662 cinnamyl-alcohol dehydrogenase family protein

Probab=99.19  E-value=3.6e-10  Score=87.03  Aligned_cols=136  Identities=14%  Similarity=0.116  Sum_probs=90.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHh--HcCC-CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCK--EFDS-DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~--~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.........  .+.. ..++.++.+|+++.+++..+++     ++|+|||+|+....  . .. .
T Consensus        23 ~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~d~Vih~A~~~~~--~-~~-~   93 (322)
T PLN02662         23 LLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVD-----GCEGVFHTASPFYH--D-VT-D   93 (322)
T ss_pred             HHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHc-----CCCEEEEeCCcccC--C-CC-C
Confidence            367899999999987643322211  1111 1368899999999998888887     37999999996532  1 11 1


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEecccccc-cc-Cc--------------c------chhhHhhHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATE-TI-GE--------------A------LYDYLMSKYAVL  121 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~-~~-~~--------------~------~~~y~~sK~a~~  121 (181)
                      +.   ...+++|+.              .+++|++||.++. .+ .+              +      ...|+.+|.+.+
T Consensus        94 ~~---~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E  170 (322)
T PLN02662         94 PQ---AELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEESKLWYVLSKTLAE  170 (322)
T ss_pred             hH---HHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcccchHHHHHHHHH
Confidence            11   122222222              2489999997642 21 10              1      136999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+++.+..++   |++++.++|+.+.+|..
T Consensus       171 ~~~~~~~~~~---~~~~~~lRp~~v~Gp~~  197 (322)
T PLN02662        171 EAAWKFAKEN---GIDMVTINPAMVIGPLL  197 (322)
T ss_pred             HHHHHHHHHc---CCcEEEEeCCcccCCCC
Confidence            8888776655   79999999999999864

>PRK06720 hypothetical protein; Provisional

Probab=99.18  E-value=1.5e-10  Score=81.28  Aligned_cols=86  Identities=20%  Similarity=0.354  Sum_probs=65.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.++...+++... ..+.++.+|+++.+++.+++++  ..++++|++|||||..... ..+.+.+
T Consensus        36 l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~iDilVnnAG~~~~~-~~~~~~~  114 (169)
T PRK06720         36 LAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRIDMLFQNAGLYKID-SIFSRQQ  114 (169)
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC-Ccccccc
Confidence            6789999999999988777666665432 3577889999999999999988  6788999999999987642 3444445


Q ss_pred             HHHHHHhhhee
Q 042200           79 NEKVKRVMIMV   89 (181)
Q Consensus        79 ~~~~~~~~~~n   89 (181)
                      +++ ++.++.|
T Consensus       115 ~~~-~~~~~~~  124 (169)
T PRK06720        115 END-SNVLCIN  124 (169)
T ss_pred             hhH-hhceecc
Confidence            444 4455555

>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase

Probab=99.17  E-value=3.4e-10  Score=86.68  Aligned_cols=137  Identities=12%  Similarity=-0.019  Sum_probs=90.7

Q ss_pred             cccCC--CEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHR--AKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |++.|  ++|++++|... ........+.....+.++.+|+++.+++.++++.   .++|+|||+|+....  .    .+
T Consensus        19 l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~d~vi~~a~~~~~--~----~~   89 (317)
T TIGR01181        19 ILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTE---HQPDAVVHFAAESHV--D----RS   89 (317)
T ss_pred             HHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhh---cCCCEEEEcccccCc--h----hh
Confidence            55666  68988876421 1111112222113578899999999999999884   258999999997543  1    11


Q ss_pred             HHHHHHhhheeec--------------ceeEEEecccccccc------------CccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           79 NEKVKRVMIMVVF--------------LGVLLFTANLATETI------------GEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        79 ~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      .+..+..+++|+.              ..++|++||...+..            ..+...|+.+|.+.+.+++.++.++ 
T Consensus        90 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-  168 (317)
T TIGR01181        90 ISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPSSPYSASKAASDHLVRAYHRTY-  168 (317)
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCCCchHHHHHHHHHHHHHHHHHh-
Confidence            2223334444433              248999988543221            1234579999999999999988776 


Q ss_pred             CCCeEEEEEecCcccCcc
Q 042200          133 QYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~  150 (181)
                        ++++..++|+.+..+.
T Consensus       169 --~~~~~i~R~~~i~G~~  184 (317)
T TIGR01181       169 --GLPALITRCSNNYGPY  184 (317)
T ss_pred             --CCCeEEEEeccccCCC
Confidence              7999999999888764

This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.

>TIGR01179 galE UDP-glucose-4-epimerase

Probab=99.15  E-value=6.3e-10  Score=85.53  Aligned_cols=138  Identities=13%  Similarity=0.120  Sum_probs=91.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|...........+.....+.++.+|+++.+++.+++..   +++|+||||||....  .......   
T Consensus        19 l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~---~~~d~vv~~ag~~~~--~~~~~~~---   90 (328)
T TIGR01179        19 LLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEE---HKIDAVIHFAGLIAV--GESVQDP---   90 (328)
T ss_pred             HHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHh---CCCcEEEECccccCc--chhhcCc---
Confidence            67889999988764332222222222112477889999999999998884   469999999997543  2111111   


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                       ...++.|+.             .+++|++||...+...           .+...|+.+|++++.+++.++.+.  .+++
T Consensus        91 -~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~~~~~~~~~--~~~~  167 (328)
T TIGR01179        91 -LKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYGRSKLMSERILRDLSKAD--PGLS  167 (328)
T ss_pred             -hhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchHHHHHHHHHHHHHHHHhc--cCCC
Confidence             222223322             3588988886433211           134679999999999999987762  3789


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      +..++|+.+..+.
T Consensus       168 ~~ilR~~~v~g~~  180 (328)
T TIGR01179       168 YVILRYFNVAGAD  180 (328)
T ss_pred             EEEEecCcccCCC
Confidence            9999998887763

This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.

>PRK10675 UDP-galactose-4-epimerase; Provisional

Probab=99.15  E-value=5.1e-10  Score=86.75  Aligned_cols=136  Identities=13%  Similarity=0.126  Sum_probs=88.8

Q ss_pred             cccCCCEEEEeecchHHHHHH---HhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRAL---CKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|........   ...+.. .++.++.+|++|.+++..+++.   .++|+|||+||....  ....+.+
T Consensus        20 L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vvh~a~~~~~--~~~~~~~   93 (338)
T PRK10675         20 LLQNGHDVVILDNLCNSKRSVLPVIERLGG-KHPTFVEGDIRNEALLTEILHD---HAIDTVIHFAGLKAV--GESVQKP   93 (338)
T ss_pred             HHHCCCeEEEEecCCCchHhHHHHHHHhcC-CCceEEEccCCCHHHHHHHHhc---CCCCEEEECCccccc--cchhhCH
Confidence            678899999987643222211   122221 2567889999999999988874   469999999997543  2111111


Q ss_pred             HHHHHHhhheeec-------------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           79 NEKVKRVMIMVVF-------------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        79 ~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      .    ..+++|+.             .+++|++||...+...            .+...|+.+|.+.+.+++.++.+.. 
T Consensus        94 ~----~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~-  168 (338)
T PRK10675         94 L----EYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP-  168 (338)
T ss_pred             H----HHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCChhHHHHHHHHHHHHHHHHhcC-
Confidence            2    22333332             3579999986543210            2357899999999999999876643 


Q ss_pred             CCeEEEEEecCcccCc
Q 042200          134 YDIRVNSIAHIVSATP  149 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~  149 (181)
                       ++++..++|+.+..+
T Consensus       169 -~~~~~ilR~~~v~g~  183 (338)
T PRK10675        169 -DWSIALLRYFNPVGA  183 (338)
T ss_pred             -CCcEEEEEeeeecCC
Confidence             577888887666654

>TIGR01472 gmd GDP-mannose 4,6-dehydratase

Probab=99.13  E-value=1e-09  Score=85.45  Aligned_cols=126  Identities=9%  Similarity=-0.015  Sum_probs=80.6

Q ss_pred             CcccCCCEEEEeecchH-----HHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCC
Q 042200            1 VFIQHRAKVIIADVQDD-----LCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      +|+++|++|++++|+.+     .+.........  ...+.++.+|++|.+++.++++.   .++|+|||+|+....  ..
T Consensus        19 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~ViH~Aa~~~~--~~   93 (343)
T TIGR01472        19 FLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDE---IKPTEIYNLAAQSHV--KV   93 (343)
T ss_pred             HHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHh---CCCCEEEECCccccc--ch
Confidence            36789999999998753     22222111111  12588999999999999999984   248999999997543  21


Q ss_pred             cccCCHHHHHHhh--heeec-----c-----eeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHHHHH
Q 042200           74 TLDTDNEKVKRVM--IMVVF-----L-----GVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        74 ~~~~~~~~~~~~~--~~n~~-----~-----~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      ..+.+...++..+  ..|+.     .     .++|++||...+..           ..+...|+.||.+.+.+++.++.+
T Consensus        94 ~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~  173 (343)
T TIGR01472        94 SFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFYPRSPYAAAKLYAHWITVNYREA  173 (343)
T ss_pred             hhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            1112222222111  12222     1     27889888643321           124568999999999999999887


Q ss_pred             h
Q 042200          131 L  131 (181)
Q Consensus       131 ~  131 (181)
                      +
T Consensus       174 ~  174 (343)
T TIGR01472       174 Y  174 (343)
T ss_pred             h
Confidence            6

Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=99.10  E-value=9.1e-10  Score=85.93  Aligned_cols=140  Identities=10%  Similarity=0.081  Sum_probs=91.0

Q ss_pred             CcccCCCEEEEeecchHHHH----HHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCR----ALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~----~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|......    .........  .++.++.+|++|.+++..+++     .+|+|||+|+....  ...
T Consensus        34 ~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~-----~~d~ViHlAa~~~~--~~~  106 (348)
T PRK15181         34 ELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACK-----NVDYVLHQAALGSV--PRS  106 (348)
T ss_pred             HHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhh-----CCCEEEECccccCc--hhh
Confidence            36788999999998543221    111111111  368889999999998888887     37999999997543  111


Q ss_pred             ccCCHHHHHHhh--heeec-------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           75 LDTDNEKVKRVM--IMVVF-------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        75 ~~~~~~~~~~~~--~~n~~-------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      ...+.+.++..+  ..|+.       ..++|++||...+...           .+...|+.+|.+.+.+++.++.++   
T Consensus       107 ~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---  183 (348)
T PRK15181        107 LKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSPYAVTKYVNELYADVFARSY---  183 (348)
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCChhhHHHHHHHHHHHHHHHHh---
Confidence            111122222211  11222       3489999986443211           134579999999999988876665   


Q ss_pred             CeEEEEEecCcccCcc
Q 042200          135 DIRVNSIAHIVSATPF  150 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~  150 (181)
                      |+++..++|+.+..|.
T Consensus       184 ~~~~~~lR~~~vyGp~  199 (348)
T PRK15181        184 EFNAIGLRYFNVFGRR  199 (348)
T ss_pred             CCCEEEEEecceeCcC
Confidence            8999999999999875

>PLN02240 UDP-glucose 4-epimerase

Probab=99.10  E-value=9.5e-10  Score=85.73  Aligned_cols=136  Identities=12%  Similarity=0.095  Sum_probs=88.8

Q ss_pred             cccCCCEEEEeecchHH----HHHHHhHcCC-CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDL----CRALCKEFDS-DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~----~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|....    .......... ..++.++.+|+++.+++..+++.   ..+|+|||+||....  ..   
T Consensus        25 L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~---~~~d~vih~a~~~~~--~~---   96 (352)
T PLN02240         25 LLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFAS---TRFDAVIHFAGLKAV--GE---   96 (352)
T ss_pred             HHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHh---CCCCEEEEccccCCc--cc---
Confidence            67889999999874321    1222111111 13578899999999999998874   368999999997533  11   


Q ss_pred             CCHHHHHHhhheeec-------------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           77 TDNEKVKRVMIMVVF-------------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                       +.+.+...++.|+.             .+++|++||...+..           ..+...|+.+|.+.+.+++.++... 
T Consensus        97 -~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-  174 (352)
T PLN02240         97 -SVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSATNPYGRTKLFIEEICRDIHASD-  174 (352)
T ss_pred             -cccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc-
Confidence             11223344444443             257999998643311           1245689999999999999887652 


Q ss_pred             CCCeEEEEEecCcccC
Q 042200          133 QYDIRVNSIAHIVSAT  148 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t  148 (181)
                       .++++..++|+.+..
T Consensus       175 -~~~~~~~~R~~~v~G  189 (352)
T PLN02240        175 -PEWKIILLRYFNPVG  189 (352)
T ss_pred             -CCCCEEEEeecCcCC
Confidence             267788888765544

>PLN02653 GDP-mannose 4,6-dehydratase

Probab=99.08  E-value=1.2e-09  Score=84.86  Aligned_cols=135  Identities=12%  Similarity=-0.048  Sum_probs=84.4

Q ss_pred             CcccCCCEEEEeecchHH-----HHHHHhHcCC-CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDL-----CRALCKEFDS-DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|....     ++........ ...+.++.+|++|.+++..+++.   -++|+|||+||....  ...
T Consensus        25 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~Vih~A~~~~~--~~~   99 (340)
T PLN02653         25 FLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDD---IKPDEVYNLAAQSHV--AVS   99 (340)
T ss_pred             HHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHH---cCCCEEEECCcccch--hhh
Confidence            367899999999986532     2222111111 13588999999999999999985   248999999997543  211


Q ss_pred             ccCCHHHHHHhhheeec------------c------eeEEEecccccccc----------CccchhhHhhHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF------------L------GVLLFTANLATETI----------GEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~------------~------~~iv~iss~~~~~~----------~~~~~~y~~sK~a~~~l~~~  126 (181)
                      .    +.....+++|+.            .      .++|++||...+..          ..+...|+.||.+.+.+++.
T Consensus       100 ~----~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~  175 (340)
T PLN02653        100 F----EMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTPFHPRSPYAVAKVAAHWYTVN  175 (340)
T ss_pred             h----hChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHH
Confidence            1    112233333332            1      16888887533221          11356799999999999999


Q ss_pred             HHHHhcC---CCeEEEEEecC
Q 042200          127 LCVELGQ---YDIRVNSIAHI  144 (181)
Q Consensus       127 la~~~~~---~~i~v~~i~Pg  144 (181)
                      ++.++.-   .++.++...|+
T Consensus       176 ~~~~~~~~~~~~~~~~~~gp~  196 (340)
T PLN02653        176 YREAYGLFACNGILFNHESPR  196 (340)
T ss_pred             HHHHcCCeEEEeeeccccCCC
Confidence            9888742   22334444454

>PLN02427 UDP-apiose/xylose synthase

Probab=99.08  E-value=1.6e-09  Score=85.73  Aligned_cols=139  Identities=16%  Similarity=0.130  Sum_probs=90.8

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcC--CCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++ |++|++++|+............  ...++.++.+|++|.+.+.++++     .+|+|||+|+....  ......+
T Consensus        34 L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~-----~~d~ViHlAa~~~~--~~~~~~~  106 (386)
T PLN02427         34 LMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIK-----MADLTINLAAICTP--ADYNTRP  106 (386)
T ss_pred             HHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhh-----cCCEEEEcccccCh--hhhhhCh
Confidence            5666 5899999987655443322110  01368899999999999988887     27999999997543  2222222


Q ss_pred             HHHHHHhhh--eeec------ceeEEEeccccccccC---------c------------------------cchhhHhhH
Q 042200           79 NEKVKRVMI--MVVF------LGVLLFTANLATETIG---------E------------------------ALYDYLMSK  117 (181)
Q Consensus        79 ~~~~~~~~~--~n~~------~~~iv~iss~~~~~~~---------~------------------------~~~~y~~sK  117 (181)
                      .+.+...+.  .|+.      ..++|++||...+...         |                        +...|+.+|
T Consensus       107 ~~~~~~n~~gt~~ll~aa~~~~~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK  186 (386)
T PLN02427        107 LDTIYSNFIDALPVVKYCSENNKRLIHFSTCEVYGKTIGSFLPKDHPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAK  186 (386)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeeeeeCCCcCCCCCcccccccccccccccccccccccCCCCccccchHHHH
Confidence            232222221  1222      4589999986432110         0                        123699999


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          118 YAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       118 ~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .+.+.++..++..+   |+++..++|+.+..+.
T Consensus       187 ~~~E~~~~~~~~~~---g~~~~ilR~~~vyGp~  216 (386)
T PLN02427        187 QLIERLIYAEGAEN---GLEFTIVRPFNWIGPR  216 (386)
T ss_pred             HHHHHHHHHHHhhc---CCceEEecccceeCCC
Confidence            99999887765443   8999999999999874

>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]

Probab=99.06  E-value=4.9e-09  Score=78.15  Aligned_cols=131  Identities=12%  Similarity=-0.019  Sum_probs=95.0

Q ss_pred             EEEEeecc-hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh
Q 042200            8 KVIIADVQ-DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM   86 (181)
Q Consensus         8 ~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~   86 (181)
                      +|+.++.- -+...+.++.+....++.++++|+.|.+.+.+++++   ..+|+|+|.|+..+.      +-+..+...-+
T Consensus        28 ~v~~~DkLTYAgn~~~l~~~~~~~~~~fv~~DI~D~~~v~~~~~~---~~~D~VvhfAAESHV------DRSI~~P~~Fi   98 (340)
T COG1088          28 HVVNLDKLTYAGNLENLADVEDSPRYRFVQGDICDRELVDRLFKE---YQPDAVVHFAAESHV------DRSIDGPAPFI   98 (340)
T ss_pred             eEEEEecccccCCHHHHHhhhcCCCceEEeccccCHHHHHHHHHh---cCCCeEEEechhccc------cccccChhhhh
Confidence            47777762 122222234444435899999999999999999996   368999999997665      34444455566


Q ss_pred             heeec------------c--eeEEEeccccc-------------cccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           87 IMVVF------------L--GVLLFTANLAT-------------ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        87 ~~n~~------------~--~~iv~iss~~~-------------~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      ++|+.            .  -+++.||+---             ..++.+.++|++||++.+.|++++.+.|   |+.++
T Consensus        99 ~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp~~PsSPYSASKAasD~lVray~~TY---glp~~  175 (340)
T COG1088          99 QTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTPYNPSSPYSASKAASDLLVRAYVRTY---GLPAT  175 (340)
T ss_pred             hcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCCCCCCCCcchhhhhHHHHHHHHHHHc---CCceE
Confidence            66666            2  26888876321             1234578899999999999999999999   78999


Q ss_pred             EEecCcccCcc
Q 042200          140 SIAHIVSATPF  150 (181)
Q Consensus       140 ~i~Pg~v~t~~  150 (181)
                      ...+..-..|.
T Consensus       176 ItrcSNNYGPy  186 (340)
T COG1088         176 ITRCSNNYGPY  186 (340)
T ss_pred             EecCCCCcCCC
Confidence            88888777774

>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones

Probab=99.05  E-value=1.2e-09  Score=82.72  Aligned_cols=136  Identities=14%  Similarity=0.090  Sum_probs=92.8

Q ss_pred             CcccCC--CEEEEeecchHHHH-HHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHR--AKVIIADVQDDLCR-ALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G--~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|  ++|.++++...... ......   ....++.+|++|.+++.++++     +.|+|||+|+....  ..    
T Consensus        16 ~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~---~~~~~~~~Di~d~~~l~~a~~-----g~d~V~H~Aa~~~~--~~----   81 (280)
T PF01073_consen   16 QLLERGYIYEVRVLDRSPPPKFLKDLQKS---GVKEYIQGDITDPESLEEALE-----GVDVVFHTAAPVPP--WG----   81 (280)
T ss_pred             HHHHCCCceEEEEcccccccccchhhhcc---cceeEEEeccccHHHHHHHhc-----CCceEEEeCccccc--cC----
Confidence            478899  78999988654332 112222   133489999999999999998     37999999998654  11    


Q ss_pred             CHHHHHHhhheeec-------------ceeEEEecccccccc---C--------------ccchhhHhhHHHHHHHHHHH
Q 042200           78 DNEKVKRVMIMVVF-------------LGVLLFTANLATETI---G--------------EALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~---~--------------~~~~~y~~sK~a~~~l~~~l  127 (181)
                       ....+..+++|+.             -.++|++||......   .              .....|+.||+..+.++...
T Consensus        82 -~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE~~V~~a  160 (280)
T PF01073_consen   82 -DYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAEKAVLEA  160 (280)
T ss_pred             -cccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccCchHHHHHHHHHHHHhh
Confidence             1123334444444             468999999877554   1              13347999999999887665


Q ss_pred             HH-Hhc-CCCeEEEEEecCcccCccc
Q 042200          128 CV-ELG-QYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       128 a~-~~~-~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .. ++. +..++..+|+|..|..|.-
T Consensus       161 ~~~~~~~g~~l~t~~lRP~~IyGp~d  186 (280)
T PF01073_consen  161 NGSELKNGGRLRTCALRPAGIYGPGD  186 (280)
T ss_pred             cccccccccceeEEEEeccEEeCccc
Confidence            44 111 1258999999999998853

3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process

>TIGR03466 HpnA hopanoid-associated sugar epimerase

Probab=99.05  E-value=1e-09  Score=84.48  Aligned_cols=128  Identities=13%  Similarity=0.092  Sum_probs=90.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+.....    .. ..+.++.+|+++.+++.++++     ++|+|||+|+....    ...    +
T Consensus        20 L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~D~~~~~~l~~~~~-----~~d~vi~~a~~~~~----~~~----~   81 (328)
T TIGR03466        20 LLEQGEEVRVLVRPTSDRRNL----EG-LDVEIVEGDLRDPASLRKAVA-----GCRALFHVAADYRL----WAP----D   81 (328)
T ss_pred             HHHCCCEEEEEEecCcccccc----cc-CCceEEEeeCCCHHHHHHHHh-----CCCEEEEeceeccc----CCC----C
Confidence            678899999999986543221    11 257789999999999988887     37999999986422    111    1


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccCc---------------cchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIGE---------------ALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~~---------------~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      +...++.|+.             .+++|++||...+...+               ....|+.+|.+.+.+++.++.++  
T Consensus        82 ~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~--  159 (328)
T TIGR03466        82 PEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEK--  159 (328)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChHHHHHHHHHHHHHHHHHhc--
Confidence            2223333333             35899999975543211               13479999999999998887654  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       ++++..++|+.+.++.
T Consensus       160 -~~~~~ilR~~~~~G~~  175 (328)
T TIGR03466       160 -GLPVVIVNPSTPIGPR  175 (328)
T ss_pred             -CCCEEEEeCCccCCCC
Confidence             7999999999887764

The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.

>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional

Probab=99.02  E-value=3.8e-09  Score=82.42  Aligned_cols=136  Identities=10%  Similarity=0.027  Sum_probs=88.3

Q ss_pred             cccCCCE-EEEeecch--HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAK-VIIADVQD--DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|+. |+.+++..  ...+.. ..+....++.++.+|++|.+++.++++.   .++|+|||+||....  ...    
T Consensus        20 L~~~g~~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~--~~~----   89 (352)
T PRK10084         20 IINNTQDSVVNVDKLTYAGNLESL-ADVSDSERYVFEHADICDRAELDRIFAQ---HQPDAVMHLAAESHV--DRS----   89 (352)
T ss_pred             HHHhCCCeEEEecCCCccchHHHH-HhcccCCceEEEEecCCCHHHHHHHHHh---cCCCEEEECCcccCC--cch----
Confidence            6678876 55555432  122222 2221113577899999999999999984   368999999997532  111    


Q ss_pred             HHHHHHhhheeec-----------c-----------eeEEEecccccccc---------------------CccchhhHh
Q 042200           79 NEKVKRVMIMVVF-----------L-----------GVLLFTANLATETI---------------------GEALYDYLM  115 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------~-----------~~iv~iss~~~~~~---------------------~~~~~~y~~  115 (181)
                      .+..+..+++|+.           .           .++|++||...+..                     ..+...|+.
T Consensus        90 ~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~E~~~~~p~~~Y~~  169 (352)
T PRK10084         90 ITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSEELPLFTETTAYAPSSPYSA  169 (352)
T ss_pred             hcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccccCCCccccCCCCCCChhHH
Confidence            1112334444444           1           26899988643321                     123468999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          116 SKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       116 sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +|.+.+.+++.++.++   |+++..+.|+.+..|.
T Consensus       170 sK~~~E~~~~~~~~~~---g~~~vilr~~~v~Gp~  201 (352)
T PRK10084        170 SKASSDHLVRAWLRTY---GLPTIVTNCSNNYGPY  201 (352)
T ss_pred             HHHHHHHHHHHHHHHh---CCCEEEEeccceeCCC
Confidence            9999999999988776   6778888888887764

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=98.99  E-value=5.3e-10  Score=84.06  Aligned_cols=136  Identities=18%  Similarity=0.137  Sum_probs=91.3

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCC---CC----ceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCC
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDS---DE----LISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~---~~----~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      |++.+. .++++++++.++-.+..++..   ..    .+..+.+|++|.+.+.+++++   .++|+|+|.|+.-+.  +.
T Consensus        18 l~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~---~~pdiVfHaAA~KhV--pl   92 (293)
T PF02719_consen   18 LLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEE---YKPDIVFHAAALKHV--PL   92 (293)
T ss_dssp             HHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT-----T-SEEEE------H--HH
T ss_pred             HHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhh---cCCCEEEEChhcCCC--Ch
Confidence            566675 699999999999888888731   11    234568899999999999985   468999999998765  32


Q ss_pred             cccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           74 TLDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.    ...+.+++|+.             -.++|++|+-=+..   +...||++|...+.++.+++......+.++.+
T Consensus        93 ~E~----~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKAv~---PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~  165 (293)
T PF02719_consen   93 MED----NPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKAVN---PTNVMGATKRLAEKLVQAANQYSGNSDTKFSS  165 (293)
T ss_dssp             HCC----CHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGCSS-----SHHHHHHHHHHHHHHHHCCTSSSS--EEEE
T ss_pred             HHh----CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccccCC---CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEE
Confidence            222    23445566666             45899999875554   46889999999999999999988777899999


Q ss_pred             EecCcccCc
Q 042200          141 IAHIVSATP  149 (181)
Q Consensus       141 i~Pg~v~t~  149 (181)
                      |+-|.|...
T Consensus       166 VRFGNVlgS  174 (293)
T PF02719_consen  166 VRFGNVLGS  174 (293)
T ss_dssp             EEE-EETTG
T ss_pred             EEecceecC
Confidence            999988874

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=98.97  E-value=2.3e-08  Score=74.53  Aligned_cols=141  Identities=11%  Similarity=0.054  Sum_probs=82.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCCh-hHHHHHHHhcccCCccEEEEcccccCCCCCCccc--CC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTID-SDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD--TD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--~~   78 (181)
                      |++.|++|+++.|+.++....... .  ..+.++.+|+++. +++...+.    .++|+||+++|..... .....  ..
T Consensus        37 L~~~g~~V~~~~R~~~~~~~~~~~-~--~~~~~~~~Dl~d~~~~l~~~~~----~~~d~vi~~~g~~~~~-~~~~~~~~n  108 (251)
T PLN00141         37 LLAKGFAVKAGVRDVDKAKTSLPQ-D--PSLQIVRADVTEGSDKLVEAIG----DDSDAVICATGFRRSF-DPFAPWKVD  108 (251)
T ss_pred             HHhCCCEEEEEecCHHHHHHhccc-C--CceEEEEeeCCCCHHHHHHHhh----cCCCEEEECCCCCcCC-CCCCceeee
Confidence            678899999999998766544322 1  2588899999983 44433331    2589999999864321 11111  11


Q ss_pred             HHHHHHhhheeec--ceeEEEeccccccc---cCccchhhHhhHHHHHHHHHHHHHH--hcCCCeEEEEEecCcccCcc
Q 042200           79 NEKVKRVMIMVVF--LGVLLFTANLATET---IGEALYDYLMSKYAVLGLMKNLCVE--LGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        79 ~~~~~~~~~~n~~--~~~iv~iss~~~~~---~~~~~~~y~~sK~a~~~l~~~la~~--~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .......++.-..  .++||++||...+.   +.+....|...+.+...+...+..+  +...|++++.|+||++.++.
T Consensus       109 ~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~  187 (251)
T PLN00141        109 NFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDP  187 (251)
T ss_pred             hHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECCCccCCC
Confidence            1111122111111  46899999975332   2222344666555444333223222  45678999999999998764

>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor

Probab=98.96  E-value=8.1e-09  Score=75.83  Aligned_cols=134  Identities=16%  Similarity=0.183  Sum_probs=94.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|+.|+.+.|............    ++.++.+|+++.+.+.++++.   ..+|.|||+|+....  .    ...+
T Consensus        17 ~l~~~g~~v~~~~~~~~~~~~~~~~~----~~~~~~~dl~~~~~~~~~~~~---~~~d~vi~~a~~~~~--~----~~~~   83 (236)
T PF01370_consen   17 QLLKKGHEVIVLSRSSNSESFEEKKL----NVEFVIGDLTDKEQLEKLLEK---ANIDVVIHLAAFSSN--P----ESFE   83 (236)
T ss_dssp             HHHHTTTEEEEEESCSTGGHHHHHHT----TEEEEESETTSHHHHHHHHHH---HTESEEEEEBSSSSH--H----HHHH
T ss_pred             HHHHcCCccccccccccccccccccc----eEEEEEeeccccccccccccc---cCceEEEEeeccccc--c----cccc
Confidence            36789999888877644332222222    588999999999999999996   268999999997531  1    1112


Q ss_pred             HHHHhhheeec-------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           81 KVKRVMIMVVF-------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        81 ~~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      .....++.|+.             ..++|++||...+...           .+...|+.+|...+.+++.+....   ++
T Consensus        84 ~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~  160 (236)
T PF01370_consen   84 DPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDYAKKY---GL  160 (236)
T ss_dssp             SHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHHHHHH---TS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc---cc
Confidence            22233333333             3489999995443221           145579999999999999998887   79


Q ss_pred             EEEEEecCcccCcc
Q 042200          137 RVNSIAHIVSATPF  150 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~  150 (181)
                      ++..++|+.+..+.
T Consensus       161 ~~~~~R~~~vyG~~  174 (236)
T PF01370_consen  161 RVTILRPPNVYGPG  174 (236)
T ss_dssp             EEEEEEESEEESTT
T ss_pred             cccccccccccccc
Confidence            99999999999887

The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....

>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.89  E-value=4.9e-08  Score=78.71  Aligned_cols=140  Identities=11%  Similarity=0.050  Sum_probs=106.3

Q ss_pred             cccCCCE-EEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAK-VIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +++.+.+ +++.+|++.+.-....++...   .+..++-+|+.|.+.+.+++..   .++|+|+|+|+..+.  +..+.-
T Consensus       270 il~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~---~kvd~VfHAAA~KHV--Pl~E~n  344 (588)
T COG1086         270 ILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEG---HKVDIVFHAAALKHV--PLVEYN  344 (588)
T ss_pred             HHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhc---CCCceEEEhhhhccC--cchhcC
Confidence            4555654 999999988887777776653   5788999999999999999995   469999999999876  333333


Q ss_pred             CHHHHHHhh--heeec-------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           78 DNEKVKRVM--IMVVF-------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        78 ~~~~~~~~~--~~n~~-------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      +.+.++..+  ..|+.       -.++|.+|+--+..|   ...||++|...+.++.+++......+-++.+++-|.|..
T Consensus       345 P~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKAV~P---tNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlG  421 (588)
T COG1086         345 PEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKAVNP---TNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLG  421 (588)
T ss_pred             HHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcccCC---chHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceec
Confidence            444444333  11111       468999998766554   688999999999999999988876578899999998887


Q ss_pred             c
Q 042200          149 P  149 (181)
Q Consensus       149 ~  149 (181)
                      .
T Consensus       422 S  422 (588)
T COG1086         422 S  422 (588)
T ss_pred             C
Confidence            5

>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional

Probab=98.84  E-value=4.1e-08  Score=76.54  Aligned_cols=135  Identities=13%  Similarity=0.069  Sum_probs=86.2

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecC-ChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVT-IDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |++. |++|++++|+.........    ...+.++.+|++ +.+.+..+++     ++|+|||+|+....  ......+.
T Consensus        21 L~~~~~~~V~~~~r~~~~~~~~~~----~~~~~~~~~Dl~~~~~~~~~~~~-----~~d~ViH~aa~~~~--~~~~~~p~   89 (347)
T PRK11908         21 ILETTDWEVYGMDMQTDRLGDLVN----HPRMHFFEGDITINKEWIEYHVK-----KCDVILPLVAIATP--ATYVKQPL   89 (347)
T ss_pred             HHhCCCCeEEEEeCcHHHHHHhcc----CCCeEEEeCCCCCCHHHHHHHHc-----CCCEEEECcccCCh--HHhhcCcH
Confidence            4454 7999999987654332211    125888999998 6666666655     48999999997543  22222222


Q ss_pred             HHHHHhhhe--eec------ceeEEEeccccccccC------------------ccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           80 EKVKRVMIM--VVF------LGVLLFTANLATETIG------------------EALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        80 ~~~~~~~~~--n~~------~~~iv~iss~~~~~~~------------------~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      ..++..+..  |+.      ..++|++||...+...                  .+...|+.+|.+.+.+++.++..+  
T Consensus        90 ~~~~~n~~~~~~ll~aa~~~~~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~--  167 (347)
T PRK11908         90 RVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCPDEEFDPEASPLVYGPINKPRWIYACSKQLMDRVIWAYGMEE--  167 (347)
T ss_pred             HHHHHHHHHHHHHHHHHHhcCCeEEEEecceeeccCCCcCcCccccccccCcCCCccchHHHHHHHHHHHHHHHHHHc--
Confidence            222222221  222      4589999986443210                  012269999999999998877654  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       |+.+..++|+.+..+.
T Consensus       168 -~~~~~ilR~~~v~Gp~  183 (347)
T PRK11908        168 -GLNFTLFRPFNWIGPG  183 (347)
T ss_pred             -CCCeEEEeeeeeeCCC
Confidence             7889999999888775

>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated

Probab=98.82  E-value=3.5e-08  Score=83.19  Aligned_cols=135  Identities=11%  Similarity=0.090  Sum_probs=87.3

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhH-HHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSD-VKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++ |++|++++|+.........    ...+.++.+|++|.++ ++++++     ++|+|||+||....  ......+.
T Consensus       335 Ll~~~g~~V~~l~r~~~~~~~~~~----~~~~~~~~gDl~d~~~~l~~~l~-----~~D~ViHlAa~~~~--~~~~~~~~  403 (660)
T PRK08125        335 LLRDDNYEVYGLDIGSDAISRFLG----HPRFHFVEGDISIHSEWIEYHIK-----KCDVVLPLVAIATP--IEYTRNPL  403 (660)
T ss_pred             HHhCCCcEEEEEeCCchhhhhhcC----CCceEEEeccccCcHHHHHHHhc-----CCCEEEECccccCc--hhhccCHH
Confidence            5554 7999999997654332211    1258889999998665 455554     48999999997654  22222222


Q ss_pred             HHHHHhhhe--eec------ceeEEEeccccccccC---------------c---cchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           80 EKVKRVMIM--VVF------LGVLLFTANLATETIG---------------E---ALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        80 ~~~~~~~~~--n~~------~~~iv~iss~~~~~~~---------------~---~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      +.++..+..  |+.      ..++|++||...+...               +   +...|+.+|.+.+.+++.++..+  
T Consensus       404 ~~~~~Nv~~t~~ll~a~~~~~~~~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~--  481 (660)
T PRK08125        404 RVFELDFEENLKIIRYCVKYNKRIIFPSTSEVYGMCTDKYFDEDTSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKE--  481 (660)
T ss_pred             HHHHhhHHHHHHHHHHHHhcCCeEEEEcchhhcCCCCCCCcCccccccccCCCCCCccchHHHHHHHHHHHHHHHHhc--
Confidence            222222211  111      4589999996433210               1   12369999999999999887665  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       |+++..++|+.+..|.
T Consensus       482 -g~~~~ilR~~~vyGp~  497 (660)
T PRK08125        482 -GLRFTLFRPFNWMGPR  497 (660)
T ss_pred             -CCceEEEEEceeeCCC
Confidence             7999999999998874

>TIGR01746 Thioester-redct thioester reductase domain

Probab=98.81  E-value=1.5e-07  Score=73.30  Aligned_cols=130  Identities=13%  Similarity=0.116  Sum_probs=82.3

Q ss_pred             cccCC--CEEEEeecchH------HHHHHHhHcCC-----C-CceEEEeeecCCh------hHHHHHHHhcccCCccEEE
Q 042200            2 FIQHR--AKVIIADVQDD------LCRALCKEFDS-----D-ELISYVCCNVTID------SDVKNVFDFTKFGKLDIMF   61 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~------~~~~~~~~~~~-----~-~~~~~~~~D~~~~------~~i~~~~~~~~~~~id~vi   61 (181)
                      |+++|  ++|+++.|+.+      ++++......-     . .++.++.+|++++      +....+.     ..+|+||
T Consensus        19 L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~~~~~~~-----~~~d~vi   93 (367)
T TIGR01746        19 LLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDAEWERLA-----ENVDTIV   93 (367)
T ss_pred             HHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHHHHHHHH-----hhCCEEE
Confidence            67788  67999999754      22222221110     0 2688999999864      3333333     3589999


Q ss_pred             EcccccCCCCCCcccCCHHHHHHhhheeec-------------ceeEEEeccccccccC----------------ccchh
Q 042200           62 NNAGIISNMDRTTLDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIG----------------EALYD  112 (181)
Q Consensus        62 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~----------------~~~~~  112 (181)
                      ||||..... .     +   +....+.|+.             ..+++++||.......                .....
T Consensus        94 h~a~~~~~~-~-----~---~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~~~~~~~~~~~  164 (367)
T TIGR01746        94 HNGALVNWV-Y-----P---YSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAIVTPPPGLAGG  164 (367)
T ss_pred             eCCcEeccC-C-----c---HHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccccccccccCCC
Confidence            999975421 1     1   1222222322             3459999997655321                11246


Q ss_pred             hHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          113 YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       113 y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      |+.+|.+.+.+++.++.    .|++++.++||.+.++
T Consensus       165 Y~~sK~~~E~~~~~~~~----~g~~~~i~Rpg~v~G~  197 (367)
T TIGR01746       165 YAQSKWVAELLVREASD----RGLPVTIVRPGRILGN  197 (367)
T ss_pred             hHHHHHHHHHHHHHHHh----cCCCEEEECCCceeec
Confidence            99999999988876543    3899999999999976

It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.

>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]

Probab=98.77  E-value=7.3e-08  Score=72.80  Aligned_cols=135  Identities=11%  Similarity=0.171  Sum_probs=91.0

Q ss_pred             CcccCCCEEEEeecc----hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ----DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|++.|+.|+++|..    .+.++...........+.++..|+.|.+.++++|+.   -++|.|+|.|+....  +...+
T Consensus        21 ~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~---~~fd~V~Hfa~~~~v--geS~~   95 (343)
T KOG1371|consen   21 ALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSE---VKFDAVMHFAALAAV--GESME   95 (343)
T ss_pred             HHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhh---cCCceEEeehhhhcc--chhhh
Confidence            478999999999974    344554444444225899999999999999999997   348999999998765  33333


Q ss_pred             CCHHHHHHhh--heeec-------ceeEEEeccccccccC-------------ccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           77 TDNEKVKRVM--IMVVF-------LGVLLFTANLATETIG-------------EALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        77 ~~~~~~~~~~--~~n~~-------~~~iv~iss~~~~~~~-------------~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      .+....+..+  .+|++       -..+|+.||... ++.             .+..+|+.+|.+++...+.+...+.  
T Consensus        96 ~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatv-YG~p~~ip~te~~~t~~p~~pyg~tK~~iE~i~~d~~~~~~--  172 (343)
T KOG1371|consen   96 NPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATV-YGLPTKVPITEEDPTDQPTNPYGKTKKAIEEIIHDYNKAYG--  172 (343)
T ss_pred             CchhheehhhhhHHHHHHHHHHcCCceEEEecceee-ecCcceeeccCcCCCCCCCCcchhhhHHHHHHHHhhhcccc--
Confidence            3322222222  11111       356777776543 322             2677899999999999998887774  


Q ss_pred             CeEEEEEecC
Q 042200          135 DIRVNSIAHI  144 (181)
Q Consensus       135 ~i~v~~i~Pg  144 (181)
                       ..+..++=+
T Consensus       173 -~~~~~LRyf  181 (343)
T KOG1371|consen  173 -WKVTGLRYF  181 (343)
T ss_pred             -ceEEEEEec
Confidence             455555443

>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional

Probab=98.77  E-value=2.6e-08  Score=76.33  Aligned_cols=133  Identities=12%  Similarity=0.090  Sum_probs=78.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh----cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF----TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~----~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++++++.|+.......         ..+..+|++|..+...++..    ..++++|+|||+||....  ...  .
T Consensus        19 L~~~g~~~v~~~~~~~~~~~~---------~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~--~~~--~   85 (308)
T PRK11150         19 LNDKGITDILVVDNLKDGTKF---------VNLVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHEGACSST--TEW--D   85 (308)
T ss_pred             HHhCCCceEEEecCCCcchHH---------HhhhhhhhhhhhhHHHHHHHHhcccccCCccEEEECceecCC--cCC--C
Confidence            678898766665543222111         01234566665544444443    234579999999996443  211  1


Q ss_pred             CHHHHHHhh--heeec------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 DNEKVKRVM--IMVVF------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~--~~n~~------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      ..+.++..+  ..|+.      ..++|++||...+..           ..+...|+.+|.+.+.+++.+..+.   ++.+
T Consensus        86 ~~~~~~~n~~~t~~ll~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~  162 (308)
T PRK11150         86 GKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTDDFIEEREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQI  162 (308)
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCcEEEEcchHHhCcCCCCCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCE
Confidence            111122111  12222      447999988754321           1234579999999999988776554   7999


Q ss_pred             EEEecCcccCcc
Q 042200          139 NSIAHIVSATPF  150 (181)
Q Consensus       139 ~~i~Pg~v~t~~  150 (181)
                      ..++|+.+..+.
T Consensus       163 ~~lR~~~vyG~~  174 (308)
T PRK11150        163 CGFRYFNVYGPR  174 (308)
T ss_pred             EEEeeeeecCCC
Confidence            999999888874

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=98.76  E-value=7.8e-08  Score=81.23  Aligned_cols=136  Identities=11%  Similarity=0.047  Sum_probs=88.9

Q ss_pred             cccC--CCEEEEeecch--HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQH--RAKVIIADVQD--DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++  |++|++++|..  ........ .....++.++.+|++|.+.+.+++..   .++|+|||+|+....  ......
T Consensus        26 Ll~~g~~~~V~~~d~~~~~~~~~~l~~-~~~~~~v~~~~~Dl~d~~~~~~~~~~---~~~D~ViHlAa~~~~--~~~~~~   99 (668)
T PLN02260         26 LIRNYPDYKIVVLDKLDYCSNLKNLNP-SKSSPNFKFVKGDIASADLVNYLLIT---EGIDTIMHFAAQTHV--DNSFGN   99 (668)
T ss_pred             HHHhCCCCEEEEEeCCCccchhhhhhh-cccCCCeEEEECCCCChHHHHHHHhh---cCCCEEEECCCccCc--hhhhhC
Confidence            4555  68899988742  22222211 11113688999999999888877653   468999999997643  111111


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEecccccccc--------------CccchhhHhhHHHHHHHHHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATETI--------------GEALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~--------------~~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      +    ...+++|+.              .+++|++||...+..              ..+...|+.+|.+.+.+++.+..
T Consensus       100 ~----~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E~~~~~p~~~Y~~sK~~aE~~v~~~~~  175 (668)
T PLN02260        100 S----FEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHEASQLLPTNPYSATKAGAEMLVMAYGR  175 (668)
T ss_pred             H----HHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccccCCCCCCCCcHHHHHHHHHHHHHHHH
Confidence            1    122222222              248999999643311              11345799999999999998877


Q ss_pred             HhcCCCeEEEEEecCcccCcc
Q 042200          130 ELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ++   ++++..++|+.+..+.
T Consensus       176 ~~---~l~~vilR~~~VyGp~  193 (668)
T PLN02260        176 SY---GLPVITTRGNNVYGPN  193 (668)
T ss_pred             Hc---CCCEEEECcccccCcC
Confidence            65   7899999999998764

>PLN02695 GDP-D-mannose-3',5'-epimerase

Probab=98.76  E-value=1.1e-07  Score=74.90  Aligned_cols=135  Identities=13%  Similarity=0.102  Sum_probs=86.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |.++|++|++++|.....   .....  ..+.++.+|+++.+.+..++.     ++|+|||+|+..... ..........
T Consensus        41 L~~~G~~V~~v~r~~~~~---~~~~~--~~~~~~~~Dl~d~~~~~~~~~-----~~D~Vih~Aa~~~~~-~~~~~~~~~~  109 (370)
T PLN02695         41 LKAEGHYIIASDWKKNEH---MSEDM--FCHEFHLVDLRVMENCLKVTK-----GVDHVFNLAADMGGM-GFIQSNHSVI  109 (370)
T ss_pred             HHhCCCEEEEEEeccccc---ccccc--ccceEEECCCCCHHHHHHHHh-----CCCEEEEcccccCCc-cccccCchhh
Confidence            667899999999864311   11100  125678899999888777765     379999999865320 1111111111


Q ss_pred             HHHh--hheeec-------ceeEEEeccccccc-----------------cCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           82 VKRV--MIMVVF-------LGVLLFTANLATET-----------------IGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        82 ~~~~--~~~n~~-------~~~iv~iss~~~~~-----------------~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      +...  ...|+.       .+++|++||...+-                 +..+...|+.+|.+.+.+++.++..+   |
T Consensus       110 ~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~---g  186 (370)
T PLN02695        110 MYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLATEELCKHYTKDF---G  186 (370)
T ss_pred             HHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---C
Confidence            1111  112222       34899999864321                 12244579999999999998877665   8


Q ss_pred             eEEEEEecCcccCcc
Q 042200          136 IRVNSIAHIVSATPF  150 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~  150 (181)
                      +++..++|+.+..|.
T Consensus       187 ~~~~ilR~~~vyGp~  201 (370)
T PLN02695        187 IECRIGRFHNIYGPF  201 (370)
T ss_pred             CCEEEEEECCccCCC
Confidence            999999999999873

>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]

Probab=98.74  E-value=1e-06  Score=60.39  Aligned_cols=147  Identities=18%  Similarity=0.120  Sum_probs=92.2

Q ss_pred             EEEEeecchHHHHHHHhHcCCCCceEEEeeecCC----------------hhHHHHHHHh----cccCCccEEEEccccc
Q 042200            8 KVIIADVQDDLCRALCKEFDSDELISYVCCNVTI----------------DSDVKNVFDF----TKFGKLDIMFNNAGII   67 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~----------------~~~i~~~~~~----~~~~~id~vi~~ag~~   67 (181)
                      +|++.+-.-.-...+++.++.+ +.-+..+|++.                .|+-+.++++    ....++|.|+..||.+
T Consensus         5 rVivYGGkGALGSacv~~Fkan-nywV~siDl~eNe~Ad~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav~CVAGGW   83 (236)
T KOG4022|consen    5 RVIVYGGKGALGSACVEFFKAN-NYWVLSIDLSENEQADSSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAVFCVAGGW   83 (236)
T ss_pred             eEEEEcCcchHhHHHHHHHHhc-CeEEEEEeecccccccceEEecCCcchhHHHHHHHHHHHHhhcccccceEEEeeccc
Confidence            5666555555555555555442 23333444443                3344445554    2234799999999987


Q ss_pred             CCCCCCcccC-----CHHHHHHhh----------heeec-ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           68 SNMDRTTLDT-----DNEKVKRVM----------IMVVF-LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        68 ~~~~~~~~~~-----~~~~~~~~~----------~~n~~-~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      ..  +.-...     ..--|.+.+          ..++. +|-+-....-++.-+.|++..|+++|+|+..|+++|+.+-
T Consensus        84 AG--GnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gTPgMIGYGMAKaAVHqLt~SLaak~  161 (236)
T KOG4022|consen   84 AG--GNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGTPGMIGYGMAKAAVHQLTSSLAAKD  161 (236)
T ss_pred             cC--CCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCCCcccchhHHHHHHHHHHHHhcccc
Confidence            65  322110     000011111          11111 4555555556667788999999999999999999999876


Q ss_pred             c--CCCeEEEEEecCcccCcccchhcCC
Q 042200          132 G--QYDIRVNSIAHIVSATPFFCNAMGI  157 (181)
Q Consensus       132 ~--~~~i~v~~i~Pg~v~t~~~~~~~~~  157 (181)
                      .  +.|--..+|.|=..+|||.+..++.
T Consensus       162 SGlP~gsaa~~ilPVTLDTPMNRKwMP~  189 (236)
T KOG4022|consen  162 SGLPDGSAALTILPVTLDTPMNRKWMPN  189 (236)
T ss_pred             cCCCCCceeEEEeeeeccCccccccCCC
Confidence            5  4678899999999999999887764

>PF08643 DUF1776: Fungal family of unknown function (DUF1776); InterPro: IPR013952 This is a fungal protein of unknown function

Probab=98.74  E-value=2.7e-07  Score=69.78  Aligned_cols=145  Identities=10%  Similarity=-0.033  Sum_probs=107.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh----cccC------------CccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF----TKFG------------KLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~----~~~~------------~id~vi~~ag   65 (181)
                      |-++|+-|+++..+.+..+...++-.  ..+.....|..+..++...+.+    -+.+            .+..||....
T Consensus        24 LeRRGFIV~v~~~~~ed~~~ve~e~~--~dI~~L~ld~~~~~~~~~~l~~f~~~L~~p~~p~~~~~~h~l~L~svi~~Ps  101 (299)
T PF08643_consen   24 LERRGFIVYVTVSSAEDEKYVESEDR--PDIRPLWLDDSDPSSIHASLSRFASLLSRPHVPFPGAPPHHLQLKSVIFIPS  101 (299)
T ss_pred             HhhCCeEEEEEeCCHHHHHHHHhccC--CCCCCcccCCCCCcchHHHHHHHHHHhcCCCCCCCCCCCceeEEEEEEEecC
Confidence            45899999999998876665544332  2566677777665554444443    1111            4566666655


Q ss_pred             ccCCCCCCcccCCHHHHHHhhheeec-------------------cee-EEEeccccccccCccchhhHhhHHHHHHHHH
Q 042200           66 IISNMDRTTLDTDNEKVKRVMIMVVF-------------------LGV-LLFTANLATETIGEALYDYLMSKYAVLGLMK  125 (181)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~n~~-------------------~~~-iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~  125 (181)
                      ...+ .+++..++.+.|.+.++.++.                   +.+ |++.-|+......|..++-....+++.+|++
T Consensus       102 l~yp-~gPie~i~~s~~~~~ln~~ll~~~~~~q~lLPlL~~~~~~~~~iil~~Psi~ssl~~PfhspE~~~~~al~~~~~  180 (299)
T PF08643_consen  102 LSYP-TGPIETISPSSWADELNTRLLTPILTIQGLLPLLRSRSNQKSKIILFNPSISSSLNPPFHSPESIVSSALSSFFT  180 (299)
T ss_pred             CCCC-CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEeCchhhccCCCccCHHHHHHHHHHHHHH
Confidence            5442 388889999999999998887                   234 5555577777888888999999999999999


Q ss_pred             HHHHHhcCCCeEEEEEecCcccCc
Q 042200          126 NLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       126 ~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +|++|+.+++|.|..+..|.++-.
T Consensus       181 ~LrrEl~~~~I~V~~i~LG~l~i~  204 (299)
T PF08643_consen  181 SLRRELRPHNIDVTQIKLGNLDIG  204 (299)
T ss_pred             HHHHHhhhcCCceEEEEeeeeccc
Confidence            999999999999999999988865

One of the proteins P32792 from SWISSPROT has been localised to the mitochondria [].

>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase

Probab=98.73  E-value=1.2e-07  Score=75.26  Aligned_cols=137  Identities=9%  Similarity=0.051  Sum_probs=85.0

Q ss_pred             cccCCCEEEEeecchHHHHH--HHhHcCC-CCceEEEeeecCChhHHHHHHHhcccC-CccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRA--LCKEFDS-DELISYVCCNVTIDSDVKNVFDFTKFG-KLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~--~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~~~~~-~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+..+...  ...++.. ...+.++.+|++|.+++.++++.  .+ ++|+||||+|..........+.
T Consensus        80 Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~--~~~~~D~Vi~~aa~~~~~~~~~~~v  157 (390)
T PLN02657         80 LVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFS--EGDPVDVVVSCLASRTGGVKDSWKI  157 (390)
T ss_pred             HHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHH--hCCCCcEEEECCccCCCCCccchhh
Confidence            67899999999998754321  0111111 12688999999999999999984  12 6899999998543200111111


Q ss_pred             CHHHHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           78 DNEKVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ..+...+.++.-..  .+++|++||....   .+...|..+|...+...+.     ...+++...++|+.+..
T Consensus       158 n~~~~~~ll~aa~~~gv~r~V~iSS~~v~---~p~~~~~~sK~~~E~~l~~-----~~~gl~~tIlRp~~~~~  222 (390)
T PLN02657        158 DYQATKNSLDAGREVGAKHFVLLSAICVQ---KPLLEFQRAKLKFEAELQA-----LDSDFTYSIVRPTAFFK  222 (390)
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEEeecccc---CcchHHHHHHHHHHHHHHh-----ccCCCCEEEEccHHHhc
Confidence            11111111111111  3579999987543   3456788889888776543     23589999999976654

>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase

Probab=98.68  E-value=1.2e-07  Score=71.75  Aligned_cols=99  Identities=10%  Similarity=-0.064  Sum_probs=66.4

Q ss_pred             eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec------------ceeEEEeccccc
Q 042200           36 CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------LGVLLFTANLAT  103 (181)
Q Consensus        36 ~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------~~~iv~iss~~~  103 (181)
                      .+|+.+.+++.++++.   .++|+|||+||....  ....    ......+++|+.            +.++|++||...
T Consensus        33 ~~d~~~~~~~~~~~~~---~~~d~vi~~a~~~~~--~~~~----~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~Ss~~v  103 (287)
T TIGR01214        33 QLDLTDPEALERLLRA---IRPDAVVNTAAYTDV--DGAE----SDPEKAFAVNALAPQNLARAAARHGARLVHISTDYV  103 (287)
T ss_pred             ccCCCCHHHHHHHHHh---CCCCEEEECCccccc--cccc----cCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeeee
Confidence            4699999999999884   357999999997543  1111    112222333332            347999998643


Q ss_pred             ccc-----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          104 ETI-----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       104 ~~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +.+           ..+...|+.+|...+.+++.+       +.++..++|+.+..+.
T Consensus       104 y~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~~-------~~~~~ilR~~~v~G~~  154 (287)
T TIGR01214       104 FDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRAA-------GPNALIVRTSWLYGGG  154 (287)
T ss_pred             ecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHHh-------CCCeEEEEeeecccCC
Confidence            321           113457999999999888754       4578999999998764

This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.

>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila

Probab=98.67  E-value=2.6e-07  Score=68.84  Aligned_cols=137  Identities=9%  Similarity=0.085  Sum_probs=73.1

Q ss_pred             cccCCC--EEEEeecch---HHHHHHHhHcCC-----------CCceEEEeeecCChh------HHHHHHHhcccCCccE
Q 042200            2 FIQHRA--KVIIADVQD---DLCRALCKEFDS-----------DELISYVCCNVTIDS------DVKNVFDFTKFGKLDI   59 (181)
Q Consensus         2 l~~~G~--~Vv~~~r~~---~~~~~~~~~~~~-----------~~~~~~~~~D~~~~~------~i~~~~~~~~~~~id~   59 (181)
                      |++.+.  +|+++.|..   +..++..+.+..           ..++.++.+|++++.      +...+.+     .+|+
T Consensus        16 Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~~~~L~~-----~v~~   90 (249)
T PF07993_consen   16 LLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDEDYQELAE-----EVDV   90 (249)
T ss_dssp             HHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHHHHHHHH-----H--E
T ss_pred             HHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHHhhcccc-----ccce
Confidence            455555  899999964   223333333211           148999999999853      3444444     4899


Q ss_pred             EEEcccccCCCCCCccc---CCHHHHHHhhheeec--ceeEEEeccccccccC---------------------ccchhh
Q 042200           60 MFNNAGIISNMDRTTLD---TDNEKVKRVMIMVVF--LGVLLFTANLATETIG---------------------EALYDY  113 (181)
Q Consensus        60 vi~~ag~~~~~~~~~~~---~~~~~~~~~~~~n~~--~~~iv~iss~~~~~~~---------------------~~~~~y  113 (181)
                      |||||+..... .++.+   ...+...+.++....  ..+++++||. ...+.                     .....|
T Consensus        91 IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~gY  168 (249)
T PF07993_consen   91 IIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTA-YVAGSRPGTIEEKVYPEEEDDLDPPQGFPNGY  168 (249)
T ss_dssp             EEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEG-GGTTS-TTT--SSS-HHH--EEE--TTSEE-H
T ss_pred             eeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccc-cccCCCCCcccccccccccccchhhccCCccH
Confidence            99999976542 22222   223334444433332  4589999993 22111                     123479


Q ss_pred             HhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200          114 LMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus       114 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ..||+..|.+++..+.+.   |+.+..++||.+-.
T Consensus       169 ~~SK~~aE~~l~~a~~~~---g~p~~I~Rp~~i~g  200 (249)
T PF07993_consen  169 EQSKWVAERLLREAAQRH---GLPVTIYRPGIIVG  200 (249)
T ss_dssp             HHHHHHHHHHHHHHHHHH------EEEEEE-EEE-
T ss_pred             HHHHHHHHHHHHHHHhcC---CceEEEEecCcccc
Confidence            999999999999888765   79999999999887

A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.

>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase

Probab=98.66  E-value=2.3e-07  Score=70.82  Aligned_cols=108  Identities=14%  Similarity=0.094  Sum_probs=70.6

Q ss_pred             eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh--heeec-------ceeEEEecccccccc
Q 042200           36 CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM--IMVVF-------LGVLLFTANLATETI  106 (181)
Q Consensus        36 ~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~--~~n~~-------~~~iv~iss~~~~~~  106 (181)
                      .+|+++.+++.++++.   .++|+|||+|+..... ......+.+.++..+  ..|+.       .+++|++||...+.+
T Consensus        32 ~~Dl~~~~~l~~~~~~---~~~d~Vih~A~~~~~~-~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~  107 (306)
T PLN02725         32 ELDLTRQADVEAFFAK---EKPTYVILAAAKVGGI-HANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPK  107 (306)
T ss_pred             cCCCCCHHHHHHHHhc---cCCCEEEEeeeeeccc-chhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCC
Confidence            5799999999998885   3579999999975320 001112222222221  22222       357999988643221


Q ss_pred             C-------------c--cc-hhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          107 G-------------E--AL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       107 ~-------------~--~~-~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .             +  +. ..|+.+|.+.+.+++.+...+   ++++..++|+.+..+.
T Consensus       108 ~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~---~~~~~~~R~~~vyG~~  164 (306)
T PLN02725        108 FAPQPIPETALLTGPPEPTNEWYAIAKIAGIKMCQAYRIQY---GWDAISGMPTNLYGPH  164 (306)
T ss_pred             CCCCCCCHHHhccCCCCCCcchHHHHHHHHHHHHHHHHHHh---CCCEEEEEecceeCCC
Confidence            1             1  11 249999999998888877665   7999999999998874

>PLN02166 dTDP-glucose 4,6-dehydratase

Probab=98.61  E-value=3.3e-07  Score=73.64  Aligned_cols=134  Identities=12%  Similarity=-0.017  Sum_probs=81.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|...........+.....+.++..|+.+..     +     .++|+|||+|+....  ......+.+.
T Consensus       140 Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----~-----~~~D~ViHlAa~~~~--~~~~~~p~~~  207 (436)
T PLN02166        140 LIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----L-----LEVDQIYHLACPASP--VHYKYNPVKT  207 (436)
T ss_pred             HHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----c-----cCCCEEEECceeccc--hhhccCHHHH
Confidence            678899999999853221111112211125677888876532     2     248999999997543  2211112222


Q ss_pred             HHHhh--heeec------ceeEEEecccccccc----------------CccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           82 VKRVM--IMVVF------LGVLLFTANLATETI----------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        82 ~~~~~--~~n~~------~~~iv~iss~~~~~~----------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      ++..+  ..|+.      ..++|++||...+..                ..+...|+.+|.+.+.+++.+.+.+   ++.
T Consensus       208 ~~~Nv~gT~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~aE~~~~~y~~~~---~l~  284 (436)
T PLN02166        208 IKTNVMGTLNMLGLAKRVGARFLLTSTSEVYGDPLEHPQKETYWGNVNPIGERSCYDEGKRTAETLAMDYHRGA---GVE  284 (436)
T ss_pred             HHHHHHHHHHHHHHHHHhCCEEEEECcHHHhCCCCCCCCCccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh---CCC
Confidence            22222  12222      457999988654321                1123469999999999998887665   789


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      +..++|+.+..+.
T Consensus       285 ~~ilR~~~vYGp~  297 (436)
T PLN02166        285 VRIARIFNTYGPR  297 (436)
T ss_pred             eEEEEEccccCCC
Confidence            9999999888874

>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=98.60  E-value=1.8e-07  Score=71.52  Aligned_cols=132  Identities=16%  Similarity=0.049  Sum_probs=88.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|+.++|.........    .  .+.++.+|+++.+.+...++.   .. |.|||+|+.....  ... .+  .
T Consensus        20 L~~~g~~V~~~~r~~~~~~~~~----~--~~~~~~~d~~~~~~~~~~~~~---~~-d~vih~aa~~~~~--~~~-~~--~   84 (314)
T COG0451          20 LLAAGHDVRGLDRLRDGLDPLL----S--GVEFVVLDLTDRDLVDELAKG---VP-DAVIHLAAQSSVP--DSN-AS--D   84 (314)
T ss_pred             HHhCCCeEEEEeCCCccccccc----c--ccceeeecccchHHHHHHHhc---CC-CEEEEccccCchh--hhh-hh--C
Confidence            6677999999999766554333    2  577899999998666666663   11 9999999987641  111 10  1


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccC-----------ccch--hhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIG-----------EALY--DYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----------~~~~--~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      ....+..|+.             ..++|+.||.+...+.           +..+  .|+.+|.+.+.++..+..   ..|
T Consensus        85 ~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~~~~~~---~~~  161 (314)
T COG0451          85 PAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYAR---LYG  161 (314)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHHHHHHH---HhC
Confidence            1122223332             3578886664433321           1111  499999999999998888   448


Q ss_pred             eEEEEEecCcccCccc
Q 042200          136 IRVNSIAHIVSATPFF  151 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~  151 (181)
                      +.+..++|+.+..+..
T Consensus       162 ~~~~ilR~~~vyGp~~  177 (314)
T COG0451         162 LPVVILRPFNVYGPGD  177 (314)
T ss_pred             CCeEEEeeeeeeCCCC
Confidence            9999999998888753

>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase

Probab=98.57  E-value=6.1e-07  Score=68.78  Aligned_cols=133  Identities=11%  Similarity=0.072  Sum_probs=82.5

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|+ .|++++|..... . ...+.    ...+..|+.+.+.++.+.+. .+.++|+|||+|+....  .      .+
T Consensus        18 L~~~g~~~v~~~~~~~~~~-~-~~~~~----~~~~~~d~~~~~~~~~~~~~-~~~~~D~vvh~A~~~~~--~------~~   82 (314)
T TIGR02197        18 LNERGITDILVVDNLRDGH-K-FLNLA----DLVIADYIDKEDFLDRLEKG-AFGKIEAIFHQGACSDT--T------ET   82 (314)
T ss_pred             HHHcCCceEEEEecCCCch-h-hhhhh----heeeeccCcchhHHHHHHhh-ccCCCCEEEECccccCc--c------cc
Confidence            678897 688887653221 1 11111    12466788887777766553 23579999999996432  1      11


Q ss_pred             HHHHhhheeec------------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           81 KVKRVMIMVVF------------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        81 ~~~~~~~~n~~------------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +....+++|+.            ..++|++||...+..           ..+...|+.+|.+.+.+++.+..... .+++
T Consensus        83 ~~~~~~~~n~~~~~~ll~~~~~~~~~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~-~~~~  161 (314)
T TIGR02197        83 DGEYMMENNYQYSKRLLDWCAEKGIPFIYASSAATYGDGEAGFREGRELERPLNVYGYSKFLFDQYVRRRVLPEA-LSAQ  161 (314)
T ss_pred             chHHHHHHHHHHHHHHHHHHHHhCCcEEEEccHHhcCCCCCCcccccCcCCCCCHHHHHHHHHHHHHHHHhHhhc-cCCc
Confidence            12223333333            457999998654321           11456799999999998876433322 2578


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      +..++|+.+..+.
T Consensus       162 ~~~lR~~~vyG~~  174 (314)
T TIGR02197       162 VVGLRYFNVYGPR  174 (314)
T ss_pred             eEEEEEeeccCCC
Confidence            8999999888764

This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).

>CHL00194 ycf39 Ycf39; Provisional

Probab=98.55  E-value=1.1e-06  Score=67.71  Aligned_cols=128  Identities=9%  Similarity=-0.030  Sum_probs=79.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.++..... .    ..+.++.+|++|.+++.++++     ++|+|||+++.....+..+.+...+
T Consensus        19 ~Ll~~g~~V~~l~R~~~~~~~l~-~----~~v~~v~~Dl~d~~~l~~al~-----g~d~Vi~~~~~~~~~~~~~~~~~~~   88 (317)
T CHL00194         19 QALDEGYQVRCLVRNLRKASFLK-E----WGAELVYGDLSLPETLPPSFK-----GVTAIIDASTSRPSDLYNAKQIDWD   88 (317)
T ss_pred             HHHHCCCeEEEEEcChHHhhhHh-h----cCCEEEECCCCCHHHHHHHHC-----CCCEEEECCCCCCCCccchhhhhHH
Confidence            36789999999999875543221 1    157899999999999988887     3799999987543210112222222


Q ss_pred             HHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Q 042200           81 KVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSA  147 (181)
Q Consensus        81 ~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~  147 (181)
                      ...+.++.-..  -.++|++||..+.. . +...|..+|...+.+.+       ..+++...++|+.+.
T Consensus        89 ~~~~l~~aa~~~gvkr~I~~Ss~~~~~-~-~~~~~~~~K~~~e~~l~-------~~~l~~tilRp~~~~  148 (317)
T CHL00194         89 GKLALIEAAKAAKIKRFIFFSILNAEQ-Y-PYIPLMKLKSDIEQKLK-------KSGIPYTIFRLAGFF  148 (317)
T ss_pred             HHHHHHHHHHHcCCCEEEEeccccccc-c-CCChHHHHHHHHHHHHH-------HcCCCeEEEeecHHh
Confidence            22222221111  24899998854321 1 23557888887776553       237888889998543

>PLN02206 UDP-glucuronate decarboxylase

Probab=98.54  E-value=6.1e-07  Score=72.28  Aligned_cols=129  Identities=12%  Similarity=-0.003  Sum_probs=80.7

Q ss_pred             cccCCCEEEEeecchHHHHHH-HhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRAL-CKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|......+. ...+. ..++.++..|+.+..     +.     .+|+|||+|+....  ......+  
T Consensus       139 Ll~~G~~V~~ld~~~~~~~~~~~~~~~-~~~~~~i~~D~~~~~-----l~-----~~D~ViHlAa~~~~--~~~~~~p--  203 (442)
T PLN02206        139 LMARGDSVIVVDNFFTGRKENVMHHFS-NPNFELIRHDVVEPI-----LL-----EVDQIYHLACPASP--VHYKFNP--  203 (442)
T ss_pred             HHHCcCEEEEEeCCCccchhhhhhhcc-CCceEEEECCccChh-----hc-----CCCEEEEeeeecch--hhhhcCH--
Confidence            678899999988753222111 11111 135777888886542     22     47999999997543  2211111  


Q ss_pred             HHHHhhheeec------------ceeEEEecccccccc----------------CccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           81 KVKRVMIMVVF------------LGVLLFTANLATETI----------------GEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        81 ~~~~~~~~n~~------------~~~iv~iss~~~~~~----------------~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                        ...+++|+.            +.++|++||...+..                ..+...|+.+|.+.+.++..+...+ 
T Consensus       204 --~~~~~~Nv~gt~nLleaa~~~g~r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~-  280 (442)
T PLN02206        204 --VKTIKTNVVGTLNMLGLAKRVGARFLLTSTSEVYGDPLQHPQVETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGA-  280 (442)
T ss_pred             --HHHHHHHHHHHHHHHHHHHHhCCEEEEECChHHhCCCCCCCCCccccccCCCCCccchHHHHHHHHHHHHHHHHHHh-
Confidence              222333333            447999999754321                1123569999999999888876665 


Q ss_pred             CCCeEEEEEecCcccCcc
Q 042200          133 QYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~  150 (181)
                        ++++..++|+.+..+.
T Consensus       281 --g~~~~ilR~~~vyGp~  296 (442)
T PLN02206        281 --NVEVRIARIFNTYGPR  296 (442)
T ss_pred             --CCCeEEEEeccccCCC
Confidence              7999999998888764

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=98.48  E-value=1.9e-06  Score=60.93  Aligned_cols=123  Identities=8%  Similarity=0.022  Sum_probs=85.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|.++.|++++.++     .  ..+..+.+|+.|.+++.+.++     +.|+||+++|....      +  .+
T Consensus        17 ~L~~~~~~V~~~~R~~~~~~~-----~--~~~~~~~~d~~d~~~~~~al~-----~~d~vi~~~~~~~~------~--~~   76 (183)
T PF13460_consen   17 QLLRRGHEVTALVRSPSKAED-----S--PGVEIIQGDLFDPDSVKAALK-----GADAVIHAAGPPPK------D--VD   76 (183)
T ss_dssp             HHHHTTSEEEEEESSGGGHHH-----C--TTEEEEESCTTCHHHHHHHHT-----TSSEEEECCHSTTT------H--HH
T ss_pred             HHHHCCCEEEEEecCchhccc-----c--cccccceeeehhhhhhhhhhh-----hcchhhhhhhhhcc------c--cc
Confidence            367899999999999887776     2  279999999999999999888     48999999986532      1  33


Q ss_pred             HHHHhhheeec--ceeEEEeccccccccCcc---------chhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           81 KVKRVMIMVVF--LGVLLFTANLATETIGEA---------LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        81 ~~~~~~~~n~~--~~~iv~iss~~~~~~~~~---------~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      .....++.--.  ..++|++|+.......+.         ...|...|...+.+.       ...+++...++|+.+..+
T Consensus        77 ~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-------~~~~~~~~ivrp~~~~~~  149 (183)
T PF13460_consen   77 AAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAEEAL-------RESGLNWTIVRPGWIYGN  149 (183)
T ss_dssp             HHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHHHHH-------HHSTSEEEEEEESEEEBT
T ss_pred             ccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHHHHH-------HhcCCCEEEEECcEeEeC
Confidence            33333322111  358898888765543222         124555665554433       223899999999988776


Q ss_pred             c
Q 042200          150 F  150 (181)
Q Consensus       150 ~  150 (181)
                      .
T Consensus       150 ~  150 (183)
T PF13460_consen  150 P  150 (183)
T ss_dssp             T
T ss_pred             C
Confidence            4

...

>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional

Probab=98.47  E-value=8.9e-07  Score=67.78  Aligned_cols=103  Identities=10%  Similarity=-0.033  Sum_probs=63.4

Q ss_pred             EeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh--heeec------ceeEEEecccccccc
Q 042200           35 VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM--IMVVF------LGVLLFTANLATETI  106 (181)
Q Consensus        35 ~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~--~~n~~------~~~iv~iss~~~~~~  106 (181)
                      +..|++|.+.+.++++.   .++|+|||+|+....  ......+...+...+  ..|+.      +.++|++||...+-+
T Consensus        36 ~~~Dl~d~~~~~~~~~~---~~~D~Vih~Aa~~~~--~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~~~v~~Ss~~Vy~~  110 (299)
T PRK09987         36 YCGDFSNPEGVAETVRK---IRPDVIVNAAAHTAV--DKAESEPEFAQLLNATSVEAIAKAANEVGAWVVHYSTDYVFPG  110 (299)
T ss_pred             ccCCCCCHHHHHHHHHh---cCCCEEEECCccCCc--chhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEccceEECC
Confidence            35799999999998884   358999999997654  211111111111111  11222      457888888543211


Q ss_pred             -----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          107 -----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       107 -----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                                 ..+...|+.+|.+.+.+++.+..       ....++|+.+..|
T Consensus       111 ~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~~~~~-------~~~ilR~~~vyGp  157 (299)
T PRK09987        111 TGDIPWQETDATAPLNVYGETKLAGEKALQEHCA-------KHLIFRTSWVYAG  157 (299)
T ss_pred             CCCCCcCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CEEEEecceecCC
Confidence                       12445799999999988865532       2367777777765

>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=98.40  E-value=5.2e-06  Score=64.31  Aligned_cols=136  Identities=13%  Similarity=0.148  Sum_probs=91.9

Q ss_pred             CCCEEEEeecch------HHHHHHHhHc---CCC--CceEEEeeecCC------hhHHHHHHHhcccCCccEEEEccccc
Q 042200            5 HRAKVIIADVQD------DLCRALCKEF---DSD--ELISYVCCNVTI------DSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         5 ~G~~Vv~~~r~~------~~~~~~~~~~---~~~--~~~~~~~~D~~~------~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      .-++|++..|-+      ++++++....   .+.  .++..+..|++.      ....+++.+     .+|.||||++..
T Consensus        24 ~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~~~~La~-----~vD~I~H~gA~V   98 (382)
T COG3320          24 SDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERTWQELAE-----NVDLIIHNAALV   98 (382)
T ss_pred             CCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHHHHHHhh-----hcceEEecchhh
Confidence            346899999842      2334433311   111  689999999994      455566655     499999999975


Q ss_pred             CCC-C-CCcccCCHHHHHHhhheeec--ceeEEEecccccccc--------------------CccchhhHhhHHHHHHH
Q 042200           68 SNM-D-RTTLDTDNEKVKRVMIMVVF--LGVLLFTANLATETI--------------------GEALYDYLMSKYAVLGL  123 (181)
Q Consensus        68 ~~~-~-~~~~~~~~~~~~~~~~~n~~--~~~iv~iss~~~~~~--------------------~~~~~~y~~sK~a~~~l  123 (181)
                      .-. + ..+.........+++.....  .+.+.++||++....                    .....+|+-||++.+-+
T Consensus        99 n~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~L  178 (382)
T COG3320          99 NHVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKL  178 (382)
T ss_pred             cccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccccccccCccCCCcchhHHHHHHH
Confidence            421 0 33445556666777766666  345999999765322                    12346799999999887


Q ss_pred             HHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          124 MKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       124 ~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ++    +....|+++..++||+|..+
T Consensus       179 vr----~A~~rGLpv~I~Rpg~I~gd  200 (382)
T COG3320         179 VR----EAGDRGLPVTIFRPGYITGD  200 (382)
T ss_pred             HH----HHhhcCCCeEEEecCeeecc
Confidence            75    45555899999999999865

>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]

Probab=98.34  E-value=5.9e-06  Score=62.12  Aligned_cols=111  Identities=14%  Similarity=0.052  Sum_probs=78.3

Q ss_pred             EEEeecchHHHHHHHhHcCCCCceEE---EeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHh
Q 042200            9 VIIADVQDDLCRALCKEFDSDELISY---VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRV   85 (181)
Q Consensus         9 Vv~~~r~~~~~~~~~~~~~~~~~~~~---~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~   85 (181)
                      +++++.+-+-..++++.+.....+..   -.+|++|.+.+.+++.+   -++|+|||+|++...  .    ..+..-+..
T Consensus         3 iLi~G~~GqLG~~L~~~l~~~~~v~a~~~~~~Ditd~~~v~~~i~~---~~PDvVIn~AAyt~v--D----~aE~~~e~A   73 (281)
T COG1091           3 ILITGANGQLGTELRRALPGEFEVIATDRAELDITDPDAVLEVIRE---TRPDVVINAAAYTAV--D----KAESEPELA   73 (281)
T ss_pred             EEEEcCCChHHHHHHHHhCCCceEEeccCccccccChHHHHHHHHh---hCCCEEEECcccccc--c----cccCCHHHH
Confidence            77888888888888777763112222   24799999999999997   368999999998765  2    222234555


Q ss_pred             hheeec------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHH
Q 042200           86 MIMVVF------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        86 ~~~n~~------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la  128 (181)
                      +.+|..            +..+|++|+-.-+-|.           .+...||.||.+.+..++...
T Consensus        74 ~~vNa~~~~~lA~aa~~~ga~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~~~~  139 (281)
T COG1091          74 FAVNATGAENLARAAAEVGARLVHISTDYVFDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVRAAG  139 (281)
T ss_pred             HHhHHHHHHHHHHHHHHhCCeEEEeecceEecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHHHhC
Confidence            555655            6689999986543332           256689999999998776553

>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal

Probab=98.32  E-value=7.1e-07  Score=65.62  Aligned_cols=78  Identities=13%  Similarity=0.129  Sum_probs=60.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|+++++...        +..   .....+|+++.+++..+++.  ..++++|++|||||....  .++.+.+
T Consensus        34 ~la~~Ga~Vvlv~~~~~--------l~~---~~~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~d~--~~~~~~s  100 (227)
T TIGR02114        34 TFLSAGHEVTLVTTKRA--------LKP---EPHPNLSIREIETTKDLLITLKELVQEHDILIHSMAVSDY--TPVYMTD  100 (227)
T ss_pred             HHHHCCCEEEEEcChhh--------ccc---ccCCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEeccc--cchhhCC
Confidence            36789999999986311        111   01246899999999999888  667889999999998765  6788889


Q ss_pred             HHHHHHhhheeec
Q 042200           79 NEKVKRVMIMVVF   91 (181)
Q Consensus        79 ~~~~~~~~~~n~~   91 (181)
                      .++|+++...|.+
T Consensus       101 ~e~~~~~~~~~~~  113 (227)
T TIGR02114       101 LEQVQASDNLNEF  113 (227)
T ss_pred             HHHHhhhcchhhh
Confidence            9999998877755

In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.

>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]

Probab=98.31  E-value=1.9e-06  Score=64.09  Aligned_cols=113  Identities=13%  Similarity=0.042  Sum_probs=81.5

Q ss_pred             CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh-heeec---------ceeEEEec
Q 042200           30 ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMVVF---------LGVLLFTA   99 (181)
Q Consensus        30 ~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~-~~n~~---------~~~iv~is   99 (181)
                      .+..++..|+.+...+..++..   ..+|.|+|.|+....  ....-.+.+...+.+ ....+         ...+|++|
T Consensus        57 p~ykfv~~di~~~~~~~~~~~~---~~id~vihfaa~t~v--d~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvS  131 (331)
T KOG0747|consen   57 PNYKFVEGDIADADLVLYLFET---EEIDTVIHFAAQTHV--DRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVS  131 (331)
T ss_pred             CCceEeeccccchHHHHhhhcc---CchhhhhhhHhhhhh--hhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEec
Confidence            6899999999999999988885   579999999997654  221112222222221 11111         35789998


Q ss_pred             ccccccc------------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          100 NLATETI------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       100 s~~~~~~------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +..-+..            ..+-.+|+++|+|.+++.+++.+.|   |+.+.+++-+.|..|-
T Consensus       132 TdeVYGds~~~~~~~E~s~~nPtnpyAasKaAaE~~v~Sy~~sy---~lpvv~~R~nnVYGP~  191 (331)
T KOG0747|consen  132 TDEVYGDSDEDAVVGEASLLNPTNPYAASKAAAEMLVRSYGRSY---GLPVVTTRMNNVYGPN  191 (331)
T ss_pred             ccceecCccccccccccccCCCCCchHHHHHHHHHHHHHHhhcc---CCcEEEEeccCccCCC
Confidence            8532211            1255689999999999999999999   7999999999999984

>PRK07201 short chain dehydrogenase; Provisional

Probab=98.29  E-value=8.3e-06  Score=68.82  Aligned_cols=124  Identities=15%  Similarity=0.133  Sum_probs=79.3

Q ss_pred             cCCCEEEEeecchH--HHHHHHhHcCCCCceEEEeeecCChh------HHHHHHHhcccCCccEEEEcccccCCCCCCcc
Q 042200            4 QHRAKVIIADVQDD--LCRALCKEFDSDELISYVCCNVTIDS------DVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~------~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      ..|++|++++|+..  .+......+.. .++.++.+|+++.+      .++.+      .++|+|||+||....  .   
T Consensus        24 ~~g~~V~~l~R~~~~~~~~~~~~~~~~-~~v~~~~~Dl~~~~~~~~~~~~~~l------~~~D~Vih~Aa~~~~--~---   91 (657)
T PRK07201         24 RREATVHVLVRRQSLSRLEALAAYWGA-DRVVPLVGDLTEPGLGLSEADIAEL------GDIDHVVHLAAIYDL--T---   91 (657)
T ss_pred             CCCCEEEEEECcchHHHHHHHHHhcCC-CcEEEEecccCCccCCcCHHHHHHh------cCCCEEEECceeecC--C---
Confidence            58999999999643  33333222221 36889999999853      33332      358999999997543  1   


Q ss_pred             cCCHHHHHHhhheeec-------------ceeEEEeccccccccC-------------ccchhhHhhHHHHHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIG-------------EALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~-------------~~~~~y~~sK~a~~~l~~~la~  129 (181)
                       .+.+   ...++|+.             .+++|++||.......             .....|+.+|...+.+++.   
T Consensus        92 -~~~~---~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~~~~~~Y~~sK~~~E~~~~~---  164 (657)
T PRK07201         92 -ADEE---AQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQGLPTPYHRTKFEAEKLVRE---  164 (657)
T ss_pred             -CCHH---HHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhcCCCCchHHHHHHHHHHHHH---
Confidence             1111   11222222             4589999987553211             1234699999999988753   


Q ss_pred             HhcCCCeEEEEEecCcccCc
Q 042200          130 ELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~  149 (181)
                         ..|+++..++|+.+..+
T Consensus       165 ---~~g~~~~ilRp~~v~G~  181 (657)
T PRK07201        165 ---ECGLPWRVYRPAVVVGD  181 (657)
T ss_pred             ---cCCCcEEEEcCCeeeec
Confidence               24799999999999875

>PRK05865 hypothetical protein; Provisional

Probab=98.11  E-value=2e-05  Score=67.86  Aligned_cols=111  Identities=9%  Similarity=0.111  Sum_probs=73.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+....      +..  .+.++.+|++|.+++.++++     ++|+|||+|+....    ..+.....
T Consensus        20 Ll~~G~~Vv~l~R~~~~~------~~~--~v~~v~gDL~D~~~l~~al~-----~vD~VVHlAa~~~~----~~~vNv~G   82 (854)
T PRK05865         20 LLSQGHEVVGIARHRPDS------WPS--SADFIAADIRDATAVESAMT-----GADVVAHCAWVRGR----NDHINIDG   82 (854)
T ss_pred             HHHCcCEEEEEECCchhh------ccc--CceEEEeeCCCHHHHHHHHh-----CCCEEEECCCcccc----hHHHHHHH
Confidence            678999999999975321      112  57789999999999988887     38999999985421    11111111


Q ss_pred             HHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           82 VKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        82 ~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ..+.++....  .+++|++||..              |.+.+.+++    +   +++.+..++|+.+..+.
T Consensus        83 T~nLLeAa~~~gvkr~V~iSS~~--------------K~aaE~ll~----~---~gl~~vILRp~~VYGP~  132 (854)
T PRK05865         83 TANVLKAMAETGTGRIVFTSSGH--------------QPRVEQMLA----D---CGLEWVAVRCALIFGRN  132 (854)
T ss_pred             HHHHHHHHHHcCCCeEEEECCcH--------------HHHHHHHHH----H---cCCCEEEEEeceEeCCC
Confidence            1122111111  35899998853              777776553    2   47999999999988763

>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]

Probab=98.10  E-value=3.7e-06  Score=62.75  Aligned_cols=143  Identities=11%  Similarity=-0.027  Sum_probs=92.2

Q ss_pred             cccCCCEEEEeecchHHHHHH---HhHcC--CCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRAL---CKEFD--SDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~---~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |++.|+.|..+.|........   +.+..  ...++.++.+|++|...+.++++.   -.+|-|.|.|+..... .+|. 
T Consensus        22 LLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~---v~PdEIYNLaAQS~V~-vSFe-   96 (345)
T COG1089          22 LLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEE---VQPDEIYNLAAQSHVG-VSFE-   96 (345)
T ss_pred             HHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHh---cCchhheecccccccc-cccc-
Confidence            678999999999964332211   11111  114689999999999999999997   3479999999965541 2222 


Q ss_pred             CCHHHHHHhhhee------ec-------c-eeEEEecccccccc------------CccchhhHhhHHHHHHHHHHHHHH
Q 042200           77 TDNEKVKRVMIMV------VF-------L-GVLLFTANLATETI------------GEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        77 ~~~~~~~~~~~~n------~~-------~-~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                          ....+.+++      ++       . ...++-.|.+...+            .-+.++|+++|....-++..++..
T Consensus        97 ----~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPrSPYAvAKlYa~W~tvNYRes  172 (345)
T COG1089          97 ----QPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRES  172 (345)
T ss_pred             ----CcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCCCHHHHHHHHHHheeeehHhh
Confidence                222222222      22       1 23444444444333            347889999999999889888888


Q ss_pred             hc---CCCeEEEEEecCcccCcccch
Q 042200          131 LG---QYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       131 ~~---~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      |.   ..||-.|+=+|.-=.|-.+++
T Consensus       173 Ygl~AcnGILFNHESP~Rge~FVTRK  198 (345)
T COG1089         173 YGLFACNGILFNHESPLRGETFVTRK  198 (345)
T ss_pred             cCceeecceeecCCCCCCccceehHH
Confidence            75   457888888886544444443

>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1

Probab=98.07  E-value=1.6e-05  Score=60.49  Aligned_cols=126  Identities=13%  Similarity=0.040  Sum_probs=74.0

Q ss_pred             EEEEeecchHHHHHHHhHcCCCC-ceEEE---eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            8 KVIIADVQDDLCRALCKEFDSDE-LISYV---CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~~-~~~~~---~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      +|.+++.+-.-+..+.+.+...+ .+...   .+|++|.+++.+++.+   .++|+|||+||....  .    .-+..-+
T Consensus         2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~~dl~d~~~~~~~~~~---~~pd~Vin~aa~~~~--~----~ce~~p~   72 (286)
T PF04321_consen    2 RILITGASGFLGSALARALKERGYEVIATSRSDLDLTDPEAVAKLLEA---FKPDVVINCAAYTNV--D----ACEKNPE   72 (286)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTTSEEEEEESTTCS-TTSHHHHHHHHHH---H--SEEEE------H--H----HHHHSHH
T ss_pred             EEEEECCCCHHHHHHHHHHhhCCCEEEEeCchhcCCCCHHHHHHHHHH---hCCCeEeccceeecH--H----hhhhChh
Confidence            46777777666777777766531 23333   7799999999999996   358999999997643  1    1122233


Q ss_pred             Hhhheeec------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           84 RVMIMVVF------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        84 ~~~~~n~~------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      ..+.+|+.            +.++|++||..-+-+.           .+...||.+|...+...+.    ..+   ....
T Consensus        73 ~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~~----~~~---~~~I  145 (286)
T PF04321_consen   73 EAYAINVDATKNLAEACKERGARLIHISTDYVFDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVRA----ACP---NALI  145 (286)
T ss_dssp             HHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-SSTSSSB-TTS----SSHHHHHHHHHHHHHHH----H-S---SEEE
T ss_pred             hhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcCCcccccccCCCCCCCCHHHHHHHHHHHHHHH----hcC---CEEE
Confidence            44444444            5689999997544322           2456899999998887765    211   5567


Q ss_pred             EecCcccCc
Q 042200          141 IAHIVSATP  149 (181)
Q Consensus       141 i~Pg~v~t~  149 (181)
                      ++++.+..+
T Consensus       146 lR~~~~~g~  154 (286)
T PF04321_consen  146 LRTSWVYGP  154 (286)
T ss_dssp             EEE-SEESS
T ss_pred             Eecceeccc
Confidence            777777665

1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.

>PRK08309 short chain dehydrogenase; Provisional

Probab=98.05  E-value=1.7e-05  Score=56.09  Aligned_cols=143  Identities=10%  Similarity=-0.016  Sum_probs=87.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+..+.....+.....+.++.+|++|.+++.++++.  .+++++|.+|+..-...+  ..     
T Consensus        18 ~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv~~vh~~~~--~~-----   90 (177)
T PRK08309         18 WLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAVAWIHSSAK--DA-----   90 (177)
T ss_pred             HHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEEEeccccch--hh-----
Confidence            367899999999999887776655443224688899999999999999998  667889999977765433  11     


Q ss_pred             HHHHHHhhheeecceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCC
Q 042200           79 NEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID  158 (181)
Q Consensus        79 ~~~~~~~~~~n~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~  158 (181)
                      ...+-+...+.-..-+++.+-+..+.-      .+            ..+...........-|..|++..+-...++. .
T Consensus        91 ~~~~~~~~gv~~~~~~~~h~~gs~~~~------~~------------~~~~~~~~~~~~~~~i~lgf~~~~~~~rwlt-~  151 (177)
T PRK08309         91 LSVVCRELDGSSETYRLFHVLGSAASD------PR------------IPSEKIGPARCSYRRVILGFVLEDTYSRWLT-H  151 (177)
T ss_pred             HHHHHHHHccCCCCceEEEEeCCcCCc------hh------------hhhhhhhhcCCceEEEEEeEEEeCCccccCc-h
Confidence            111111111110011345443322210      00            1111222234566678889998877667766 5


Q ss_pred             hHHHHHHHHHh
Q 042200          159 KKTFKELLYAS  169 (181)
Q Consensus       159 ~~~~~~~~~~~  169 (181)
                      +|.-+.++..+
T Consensus       152 ~ei~~gv~~~~  162 (177)
T PRK08309        152 EEISDGVIKAI  162 (177)
T ss_pred             HHHHHHHHHHH
Confidence            56667776665

>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]

Probab=97.92  E-value=4.5e-05  Score=57.07  Aligned_cols=129  Identities=12%  Similarity=-0.010  Sum_probs=90.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |..+|+.|+++|......+..+..+-+.-++..+..|+..+     ++.+     +|.++|.|+...+  ..+..-+.  
T Consensus        47 Lm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~~p-----l~~e-----vD~IyhLAapasp--~~y~~npv--  112 (350)
T KOG1429|consen   47 LMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVVEP-----LLKE-----VDQIYHLAAPASP--PHYKYNPV--  112 (350)
T ss_pred             HHhcCCeEEEEecccccchhhcchhccCcceeEEEeechhH-----HHHH-----hhhhhhhccCCCC--cccccCcc--
Confidence            66789999999987777776666655545677777777554     5553     8999999998876  44433332  


Q ss_pred             HHHhhheeec------------ceeEEEeccccccccC-----------------ccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           82 VKRVMIMVVF------------LGVLLFTANLATETIG-----------------EALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        82 ~~~~~~~n~~------------~~~iv~iss~~~~~~~-----------------~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                        +++..|..            ..++++.|+ +..++.                 .+++.|...|...+.|+..+.++. 
T Consensus       113 --ktIktN~igtln~lglakrv~aR~l~aST-seVYgdp~~hpq~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~-  188 (350)
T KOG1429|consen  113 --KTIKTNVIGTLNMLGLAKRVGARFLLAST-SEVYGDPLVHPQVETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQE-  188 (350)
T ss_pred             --ceeeecchhhHHHHHHHHHhCceEEEeec-ccccCCcccCCCccccccccCcCCchhhhhHHHHHHHHHHHHhhccc-
Confidence              23333333            556666555 454443                 367789999999999998877776 


Q ss_pred             CCCeEEEEEecCcccCcc
Q 042200          133 QYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~  150 (181)
                        ||.|...++..+..|.
T Consensus       189 --giE~rIaRifNtyGPr  204 (350)
T KOG1429|consen  189 --GIEVRIARIFNTYGPR  204 (350)
T ss_pred             --CcEEEEEeeecccCCc
Confidence              8999999998888874

>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]

Probab=97.89  E-value=5.7e-05  Score=58.86  Aligned_cols=136  Identities=12%  Similarity=-0.001  Sum_probs=87.9

Q ss_pred             cccCC--CEEEEeecchHH--HHHH-HhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHR--AKVIIADVQDDL--CRAL-CKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~~--~~~~-~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |++.|  .+|.++|..+..  .... ....+  ..+.++.+|+.+..++.+.+.    + . .|||+|+...+  .... 
T Consensus        24 L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~--~~v~~~~~D~~~~~~i~~a~~----~-~-~Vvh~aa~~~~--~~~~-   92 (361)
T KOG1430|consen   24 LLENELKLEIRVVDKTPTQSNLPAELTGFRS--GRVTVILGDLLDANSISNAFQ----G-A-VVVHCAASPVP--DFVE-   92 (361)
T ss_pred             HHhcccccEEEEeccCccccccchhhhcccC--CceeEEecchhhhhhhhhhcc----C-c-eEEEeccccCc--cccc-
Confidence            45555  668888876531  1111 11112  478999999999999998888    3 4 78888886543  2111 


Q ss_pred             CCHHHHHHhhheeec-------------ceeEEEecccccccc------------Cc--cchhhHhhHHHHHHHHHHHHH
Q 042200           77 TDNEKVKRVMIMVVF-------------LGVLLFTANLATETI------------GE--ALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~------------~~--~~~~y~~sK~a~~~l~~~la~  129 (181)
                         .+-+..+++|+.             ..++|++||.....+            +|  ....|+.||+-.+.+.+...-
T Consensus        93 ---~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~  169 (361)
T KOG1430|consen   93 ---NDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPLKHIDPYGESKALAEKLVLEANG  169 (361)
T ss_pred             ---cchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCccccccccchHHHHHHHHHHHhcC
Confidence               122333344444             468999998765433            22  224899999988887765544


Q ss_pred             HhcCCCeEEEEEecCcccCcccchh
Q 042200          130 ELGQYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                         ..+....+++|..|..|.-+..
T Consensus       170 ---~~~l~T~aLR~~~IYGpgd~~~  191 (361)
T KOG1430|consen  170 ---SDDLYTCALRPPGIYGPGDKRL  191 (361)
T ss_pred             ---CCCeeEEEEccccccCCCCccc
Confidence               4578999999999999864443

>PLN02996 fatty acyl-CoA reductase

Probab=97.87  E-value=8.1e-05  Score=60.91  Aligned_cols=37  Identities=14%  Similarity=0.158  Sum_probs=29.9

Q ss_pred             hhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccch
Q 042200          112 DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       112 ~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      .|+.+|+..+.+++.++    . ++.+..++|+.|..+...+
T Consensus       235 ~Y~~TK~~aE~lv~~~~----~-~lpv~i~RP~~V~G~~~~p  271 (491)
T PLN02996        235 TYVFTKAMGEMLLGNFK----E-NLPLVIIRPTMITSTYKEP  271 (491)
T ss_pred             chHhhHHHHHHHHHHhc----C-CCCEEEECCCEeccCCcCC
Confidence            59999999999886542    2 7999999999998876444

>PLN02260 probable rhamnose biosynthetic enzyme

Probab=97.86  E-value=0.00021  Score=60.73  Aligned_cols=126  Identities=16%  Similarity=-0.023  Sum_probs=78.1

Q ss_pred             EEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh
Q 042200            8 KVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM   86 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~   86 (181)
                      +|++++.+---...+++.+... -.+.+...|++|.+.+.+.+..   .++|+|||+|+....  ... +...++....+
T Consensus       382 kiLVtGa~G~iG~~l~~~L~~~g~~v~~~~~~l~d~~~v~~~i~~---~~pd~Vih~Aa~~~~--~~~-~~~~~~~~~~~  455 (668)
T PLN02260        382 KFLIYGRTGWIGGLLGKLCEKQGIAYEYGKGRLEDRSSLLADIRN---VKPTHVFNAAGVTGR--PNV-DWCESHKVETI  455 (668)
T ss_pred             eEEEECCCchHHHHHHHHHHhCCCeEEeeccccccHHHHHHHHHh---hCCCEEEECCcccCC--CCC-ChHHhCHHHHH
Confidence            5888888766666666665432 2444567799999999888875   358999999997643  111 11122233444


Q ss_pred             heeec------------ceeEEEeccccccc-----------cC-------ccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           87 IMVVF------------LGVLLFTANLATET-----------IG-------EALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        87 ~~n~~------------~~~iv~iss~~~~~-----------~~-------~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      ++|+.            +.+++++||...+.           +.       ++...|+.+|.+.+.+++.+...   ..+
T Consensus       456 ~~N~~gt~~l~~a~~~~g~~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg~sK~~~E~~~~~~~~~---~~~  532 (668)
T PLN02260        456 RANVVGTLTLADVCRENGLLMMNFATGCIFEYDAKHPEGSGIGFKEEDKPNFTGSFYSKTKAMVEELLREYDNV---CTL  532 (668)
T ss_pred             HHHhHHHHHHHHHHHHcCCeEEEEcccceecCCcccccccCCCCCcCCCCCCCCChhhHHHHHHHHHHHhhhhh---eEE
Confidence            44444            33566665533211           11       12367999999999999876432   356


Q ss_pred             EEEEEe
Q 042200          137 RVNSIA  142 (181)
Q Consensus       137 ~v~~i~  142 (181)
                      |+..+.
T Consensus       533 r~~~~~  538 (668)
T PLN02260        533 RVRMPI  538 (668)
T ss_pred             EEEEec
Confidence            666665

>PLN02778 3,5-epimerase/4-reductase

Probab=97.76  E-value=0.00031  Score=53.81  Aligned_cols=116  Identities=19%  Similarity=0.018  Sum_probs=66.0

Q ss_pred             EEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh
Q 042200            8 KVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM   86 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~   86 (181)
                      +|++++-.-=-...+++.+... .++.....|+++.+.+...+..   .++|+|||+||....  ... +...++....+
T Consensus        11 kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~~~~~~~~v~~~l~~---~~~D~ViH~Aa~~~~--~~~-~~~~~~p~~~~   84 (298)
T PLN02778         11 KFLIYGKTGWIGGLLGKLCQEQGIDFHYGSGRLENRASLEADIDA---VKPTHVFNAAGVTGR--PNV-DWCESHKVETI   84 (298)
T ss_pred             eEEEECCCCHHHHHHHHHHHhCCCEEEEecCccCCHHHHHHHHHh---cCCCEEEECCcccCC--CCc-hhhhhCHHHHH
Confidence            5777776654444444444332 2455566788888877777764   358999999997643  111 01111122333


Q ss_pred             heeec------------ceeEEEeccccccc------------------cCccchhhHhhHHHHHHHHHHHHH
Q 042200           87 IMVVF------------LGVLLFTANLATET------------------IGEALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        87 ~~n~~------------~~~iv~iss~~~~~------------------~~~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      ++|+.            +.+.+++||...+.                  +.++...|+.+|.+.+.+++.++.
T Consensus        85 ~~Nv~gt~~ll~aa~~~gv~~v~~sS~~vy~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg~sK~~~E~~~~~y~~  157 (298)
T PLN02778         85 RANVVGTLTLADVCRERGLVLTNYATGCIFEYDDAHPLGSGIGFKEEDTPNFTGSFYSKTKAMVEELLKNYEN  157 (298)
T ss_pred             HHHHHHHHHHHHHHHHhCCCEEEEecceEeCCCCCCCcccCCCCCcCCCCCCCCCchHHHHHHHHHHHHHhhc
Confidence            33333            22345555432110                  011235799999999999987653

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=97.74  E-value=0.00014  Score=63.86  Aligned_cols=127  Identities=13%  Similarity=0.184  Sum_probs=101.9

Q ss_pred             cccCCCE-EEEeecch--HHHH-HHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAK-VIIADVQD--DLCR-ALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~--~~~~-~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |.++|++ ++++.|.-  ..-+ ..++.++.+ .++..-..|++..+..++++++ .+.+.+-+++|.|.....  .-++
T Consensus      1788 Li~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGGiFnLA~VLRD--~LiE 1865 (2376)
T KOG1202|consen 1788 LIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGGIFNLAAVLRD--GLIE 1865 (2376)
T ss_pred             HHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccchhhHHHHHHh--hhhc
Confidence            4678998 88888863  1111 225556554 5777778899999999999999 888999999999999887  7888


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      +.+++.|++.-+..+.               -.-+|.+||..+-++..++..|+-+.++++.+++.-+.+
T Consensus      1866 nQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN~GQtNYG~aNS~MERiceqRr~~ 1935 (2376)
T KOG1202|consen 1866 NQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGNAGQTNYGLANSAMERICEQRRHE 1935 (2376)
T ss_pred             ccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCCCcccccchhhHHHHHHHHHhhhc
Confidence            8899999888766655               345888899999999999999999999999999865443

>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase

Probab=97.73  E-value=0.00086  Score=61.39  Aligned_cols=134  Identities=10%  Similarity=0.028  Sum_probs=77.2

Q ss_pred             CEEEEeecchHHH---HHHHhHcC------CC--CceEEEeeecCCh------hHHHHHHHhcccCCccEEEEcccccCC
Q 042200            7 AKVIIADVQDDLC---RALCKEFD------SD--ELISYVCCNVTID------SDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         7 ~~Vv~~~r~~~~~---~~~~~~~~------~~--~~~~~~~~D~~~~------~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      ++|+++.|+....   +.....+.      ..  .++.++.+|+++.      +....+..     .+|+|||||+....
T Consensus      1000 ~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl~~~~~~~l~~-----~~d~iiH~Aa~~~~ 1074 (1389)
T TIGR03443      1000 FKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGLSDEKWSDLTN-----EVDVIIHNGALVHW 1074 (1389)
T ss_pred             cEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCcCHHHHHHHHh-----cCCEEEECCcEecC
Confidence            7899999974322   22211110      00  3688999999854      33333332     58999999997643


Q ss_pred             CCCCccc---CCHHHHHHhhheeec--ceeEEEecccccccc-----------------C-----------ccchhhHhh
Q 042200           70 MDRTTLD---TDNEKVKRVMIMVVF--LGVLLFTANLATETI-----------------G-----------EALYDYLMS  116 (181)
Q Consensus        70 ~~~~~~~---~~~~~~~~~~~~n~~--~~~iv~iss~~~~~~-----------------~-----------~~~~~y~~s  116 (181)
                      . .+...   .......+.++....  ..+++++||.+.+..                 .           .....|+.|
T Consensus      1075 ~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~s 1153 (1389)
T TIGR03443      1075 V-YPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQS 1153 (1389)
T ss_pred             c-cCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhhhhccCCCCCcccccccccccCCCChHHH
Confidence            1 11111   011111111111111  347899998654311                 0           012359999


Q ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          117 KYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       117 K~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      |.+.+.+++.++.    .|+++..++||.|..+.
T Consensus      1154 K~~aE~l~~~~~~----~g~~~~i~Rpg~v~G~~ 1183 (1389)
T TIGR03443      1154 KWVAEYIIREAGK----RGLRGCIVRPGYVTGDS 1183 (1389)
T ss_pred             HHHHHHHHHHHHh----CCCCEEEECCCccccCC
Confidence            9999998876533    38999999999998763

Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.

>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family

Probab=97.63  E-value=0.00019  Score=54.44  Aligned_cols=123  Identities=9%  Similarity=-0.005  Sum_probs=73.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCC-ccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGK-LDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~-id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|++.|++|.++.|+.++...        ..+..+.+|+.|.+++..++.. ....+ +|.++++++....   .. ...
T Consensus        18 ~L~~~g~~V~~~~R~~~~~~~--------~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~~---~~-~~~   85 (285)
T TIGR03649        18 LLQAASVPFLVASRSSSSSAG--------PNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAPPIPD---LA-PPM   85 (285)
T ss_pred             HHHhCCCcEEEEeCCCccccC--------CCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCCCCCC---hh-HHH
Confidence            367889999999998764321        1455678999999999999864 33345 8999999874321   10 001


Q ss_pred             HHHHHHhhheeecceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           79 NEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        79 ~~~~~~~~~~n~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ..-++...+.+  -++||++||.....+.       ..+...+.+.+..      .|+....++|+++...+
T Consensus        86 ~~~i~aa~~~g--v~~~V~~Ss~~~~~~~-------~~~~~~~~~l~~~------~gi~~tilRp~~f~~~~  142 (285)
T TIGR03649        86 IKFIDFARSKG--VRRFVLLSASIIEKGG-------PAMGQVHAHLDSL------GGVEYTVLRPTWFMENF  142 (285)
T ss_pred             HHHHHHHHHcC--CCEEEEeeccccCCCC-------chHHHHHHHHHhc------cCCCEEEEeccHHhhhh
Confidence            11122222222  2589999885443221       1222222222211      38999999998665443

This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.

>PLN00016 RNA-binding protein; Provisional

Probab=97.39  E-value=0.00091  Score=52.92  Aligned_cols=124  Identities=14%  Similarity=0.126  Sum_probs=73.2

Q ss_pred             CcccCCCEEEEeecchHHHHHH-------HhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRAL-------CKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~-------~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      +|+++|++|++++|+.......       ..++.. ..+.++.+|+++   +..++..   .++|+|||+++..      
T Consensus        75 ~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~-~~v~~v~~D~~d---~~~~~~~---~~~d~Vi~~~~~~------  141 (378)
T PLN00016         75 ELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSS-AGVKTVWGDPAD---VKSKVAG---AGFDVVYDNNGKD------  141 (378)
T ss_pred             HHHHCCCEEEEEecCCcchhhhccCchhhhhHhhh-cCceEEEecHHH---HHhhhcc---CCccEEEeCCCCC------
Confidence            3678999999999986543221       112211 247788889876   4444432   3589999997631      


Q ss_pred             cccCCHHHHHHhhheeec--ceeEEEeccccccccCc--c------chhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           74 TLDTDNEKVKRVMIMVVF--LGVLLFTANLATETIGE--A------LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~--~~~iv~iss~~~~~~~~--~------~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                           .+.....++.-..  -+++|++||...+....  +      ..++. +|...+.+.+       ..++.+..++|
T Consensus       142 -----~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~~~~~p~~-sK~~~E~~l~-------~~~l~~~ilRp  208 (378)
T PLN00016        142 -----LDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEGDAVKPKA-GHLEVEAYLQ-------KLGVNWTSFRP  208 (378)
T ss_pred             -----HHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCCCcCCCcc-hHHHHHHHHH-------HcCCCeEEEec
Confidence                 1222233222111  24899999875442211  0      01122 6777776543       23789999999


Q ss_pred             CcccCcc
Q 042200          144 IVSATPF  150 (181)
Q Consensus       144 g~v~t~~  150 (181)
                      +++..+.
T Consensus       209 ~~vyG~~  215 (378)
T PLN00016        209 QYIYGPG  215 (378)
T ss_pred             eeEECCC
Confidence            9998764

>TIGR01777 yfcH conserved hypothetical protein TIGR01777

Probab=97.15  E-value=0.0022  Score=48.46  Aligned_cols=52  Identities=12%  Similarity=-0.087  Sum_probs=29.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++.|++|++++|+........    .   ..  ..|+.. ....     ..+.++|+|||+||...
T Consensus        18 L~~~g~~V~~~~r~~~~~~~~~----~---~~--~~~~~~-~~~~-----~~~~~~D~Vvh~a~~~~   69 (292)
T TIGR01777        18 LTKDGHEVTILTRSPPAGANTK----W---EG--YKPWAP-LAES-----EALEGADAVINLAGEPI   69 (292)
T ss_pred             HHHcCCEEEEEeCCCCCCCccc----c---ee--eecccc-cchh-----hhcCCCCEEEECCCCCc
Confidence            6788999999999876432211    0   11  112211 1111     12346899999999643

This model represents a clade of proteins of unknown function including the E. coli yfcH protein.

>PLN02503 fatty acyl-CoA reductase 2

Probab=97.09  E-value=0.0053  Score=51.47  Aligned_cols=41  Identities=20%  Similarity=0.113  Sum_probs=26.7

Q ss_pred             hhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCC
Q 042200          112 DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI  157 (181)
Q Consensus       112 ~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~  157 (181)
                      .|.-+|+..|.++.    +.. .++.+..++|+.|.+.+..+++.+
T Consensus       349 tYt~TK~lAE~lV~----~~~-~~LPv~IvRPsiV~st~~eP~pGw  389 (605)
T PLN02503        349 TYVFTKAMGEMVIN----SMR-GDIPVVIIRPSVIESTWKDPFPGW  389 (605)
T ss_pred             hHHHHHHHHHHHHH----Hhc-CCCCEEEEcCCEecccccCCcccc
Confidence            35555555555544    222 379999999999987666665544

>PRK06732 phosphopantothenate--cysteine ligase; Validated

Probab=97.07  E-value=0.00068  Score=49.98  Aligned_cols=79  Identities=13%  Similarity=0.117  Sum_probs=49.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+....     ... ...+.++.+  .+.++....+.+ .++.+|+||||||....  .+....+.+.
T Consensus        36 L~~~G~~V~li~r~~~~~-----~~~-~~~v~~i~v--~s~~~m~~~l~~-~~~~~DivIh~AAvsd~--~~~~~~~~~~  104 (229)
T PRK06732         36 FLAAGHEVTLVTTKTAVK-----PEP-HPNLSIIEI--ENVDDLLETLEP-LVKDHDVLIHSMAVSDY--TPVYMTDLEE  104 (229)
T ss_pred             HHhCCCEEEEEECccccc-----CCC-CCCeEEEEE--ecHHHHHHHHHH-HhcCCCEEEeCCccCCc--eehhhhhhhh
Confidence            678999999998764211     000 014555553  333333333332 23468999999998764  5555667888


Q ss_pred             HHHhhheeec
Q 042200           82 VKRVMIMVVF   91 (181)
Q Consensus        82 ~~~~~~~n~~   91 (181)
                      |...+++|..
T Consensus       105 ~~~~~~v~~~  114 (229)
T PRK06732        105 VSASDNLNEF  114 (229)
T ss_pred             hhhhhhhhhh
Confidence            8888888777

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.93  E-value=0.0023  Score=51.86  Aligned_cols=50  Identities=14%  Similarity=0.077  Sum_probs=43.4

Q ss_pred             ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCc
Q 042200           92 LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIV  145 (181)
Q Consensus        92 ~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~  145 (181)
                      .|+||++++..+..   ....|+++|+++.+++|+++.|+ +++++++.|.|+.
T Consensus       116 ~griv~i~s~~~~~---~~~~~~~akaal~gl~rsla~E~-~~gi~v~~i~~~~  165 (450)
T PRK08261        116 CGRVVVLGRPPEAA---ADPAAAAAQRALEGFTRSLGKEL-RRGATAQLVYVAP  165 (450)
T ss_pred             CCEEEEEccccccC---CchHHHHHHHHHHHHHHHHHHHh-hcCCEEEEEecCC
Confidence            67999999876653   34569999999999999999999 7799999999985

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=96.79  E-value=0.0047  Score=48.84  Aligned_cols=61  Identities=15%  Similarity=0.231  Sum_probs=52.1

Q ss_pred             cccCC-CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHR-AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |++.| .+|.+++|+.+++.+.......  ++...++|+.+.+++.++++.     .|+|||++.....
T Consensus        20 la~~~d~~V~iAdRs~~~~~~i~~~~~~--~v~~~~vD~~d~~al~~li~~-----~d~VIn~~p~~~~   81 (389)
T COG1748          20 LAQNGDGEVTIADRSKEKCARIAELIGG--KVEALQVDAADVDALVALIKD-----FDLVINAAPPFVD   81 (389)
T ss_pred             HHhCCCceEEEEeCCHHHHHHHHhhccc--cceeEEecccChHHHHHHHhc-----CCEEEEeCCchhh
Confidence            57788 7899999999999988776655  799999999999999999994     2999999987543

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.73  E-value=0.0073  Score=47.98  Aligned_cols=60  Identities=17%  Similarity=0.236  Sum_probs=45.5

Q ss_pred             cccCC-C-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHR-A-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G-~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++.+ . +|++.+|+.+++++..+++.. .++..+.+|+.|.+++.++++.     .|+|||++|..
T Consensus        17 L~~~~~~~~v~va~r~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~l~~~~~~-----~dvVin~~gp~   78 (386)
T PF03435_consen   17 LARRGPFEEVTVADRNPEKAERLAEKLLG-DRVEAVQVDVNDPESLAELLRG-----CDVVINCAGPF   78 (386)
T ss_dssp             HHCTTCE-EEEEEESSHHHHHHHHT--TT-TTEEEEE--TTTHHHHHHHHTT-----SSEEEE-SSGG
T ss_pred             HhcCCCCCcEEEEECCHHHHHHHHhhccc-cceeEEEEecCCHHHHHHHHhc-----CCEEEECCccc
Confidence            34454 3 799999999999998877522 4899999999999999999884     49999999965

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]

Probab=96.72  E-value=0.0033  Score=47.17  Aligned_cols=128  Identities=14%  Similarity=0.003  Sum_probs=68.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |.+.|+.|.++.|+..+.+.....     .       +...+.+.....    ..+|+|||.||..-.. +.   .+.+.
T Consensus        18 L~~~gh~v~iltR~~~~~~~~~~~-----~-------v~~~~~~~~~~~----~~~DavINLAG~~I~~-rr---Wt~~~   77 (297)
T COG1090          18 LRKGGHQVTILTRRPPKASQNLHP-----N-------VTLWEGLADALT----LGIDAVINLAGEPIAE-RR---WTEKQ   77 (297)
T ss_pred             HHhCCCeEEEEEcCCcchhhhcCc-----c-------ccccchhhhccc----CCCCEEEECCCCcccc-cc---CCHHH
Confidence            567899999999998766543211     1       111222222222    2699999999964331 11   22222


Q ss_pred             HHHhhheeec--------------ceeEEEeccccccccCccchhhHhhH----HHHHHHHHHHHHH---hcCCCeEEEE
Q 042200           82 VKRVMIMVVF--------------LGVLLFTANLATETIGEALYDYLMSK----YAVLGLMKNLCVE---LGQYDIRVNS  140 (181)
Q Consensus        82 ~~~~~~~n~~--------------~~~iv~iss~~~~~~~~~~~~y~~sK----~a~~~l~~~la~~---~~~~~i~v~~  140 (181)
                      =+.+++.-+.              ++++..-+|..++++......|-...    -.+..+|+.|-.+   ...-|.||..
T Consensus        78 K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~~~gtRvvl  157 (297)
T COG1090          78 KEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVL  157 (297)
T ss_pred             HHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhhhcCceEEE
Confidence            2222221111              44454445666676654333332222    2344455544332   3345899999


Q ss_pred             EecCcccCc
Q 042200          141 IAHIVSATP  149 (181)
Q Consensus       141 i~Pg~v~t~  149 (181)
                      ++-|.|..+
T Consensus       158 lRtGvVLs~  166 (297)
T COG1090         158 LRTGVVLSP  166 (297)
T ss_pred             EEEEEEecC
Confidence            999999875

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=96.59  E-value=0.03  Score=41.10  Aligned_cols=127  Identities=9%  Similarity=-0.002  Sum_probs=71.4

Q ss_pred             cccCCCEEEEeecchHHHH-HHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCR-ALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |++.|++|.++.|+..+.. ..++..    .+..+.+|+.|.+++.++++     ++|.||.+.+....  .. .+....
T Consensus        18 L~~~~~~V~~l~R~~~~~~~~~l~~~----g~~vv~~d~~~~~~l~~al~-----g~d~v~~~~~~~~~--~~-~~~~~~   85 (233)
T PF05368_consen   18 LLSAGFSVRALVRDPSSDRAQQLQAL----GAEVVEADYDDPESLVAALK-----GVDAVFSVTPPSHP--SE-LEQQKN   85 (233)
T ss_dssp             HHHTTGCEEEEESSSHHHHHHHHHHT----TTEEEES-TT-HHHHHHHHT-----TCSEEEEESSCSCC--CH-HHHHHH
T ss_pred             HHhCCCCcEEEEeccchhhhhhhhcc----cceEeecccCCHHHHHHHHc-----CCceEEeecCcchh--hh-hhhhhh
Confidence            5678999999999874321 112222    36678999999999999998     48999988886532  11 111122


Q ss_pred             HHHHhhheeecceeEEEeccccccccC----ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           81 KVKRVMIMVVFLGVLLFTANLATETIG----EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        81 ~~~~~~~~n~~~~~iv~iss~~~~~~~----~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      -++...+.++  .++|+ ||.......    .+....-..|..++.+.+..       ++..+.|+||+....+
T Consensus        86 li~Aa~~agV--k~~v~-ss~~~~~~~~~~~~p~~~~~~~k~~ie~~l~~~-------~i~~t~i~~g~f~e~~  149 (233)
T PF05368_consen   86 LIDAAKAAGV--KHFVP-SSFGADYDESSGSEPEIPHFDQKAEIEEYLRES-------GIPYTIIRPGFFMENL  149 (233)
T ss_dssp             HHHHHHHHT---SEEEE-SEESSGTTTTTTSTTHHHHHHHHHHHHHHHHHC-------TSEBEEEEE-EEHHHH
T ss_pred             HHHhhhcccc--ceEEE-EEecccccccccccccchhhhhhhhhhhhhhhc-------cccceeccccchhhhh
Confidence            2333434443  46664 554433311    11122334566555444332       7888999998655443

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>KOG2733 consensus Uncharacterized membrane protein [Function unknown]

Probab=96.33  E-value=0.016  Score=45.13  Aligned_cols=82  Identities=6%  Similarity=0.083  Sum_probs=59.0

Q ss_pred             CCCEEEEeecchHHHHHHHhHcCCC-----CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCC--------
Q 042200            5 HRAKVIIADVQDDLCRALCKEFDSD-----ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMD--------   71 (181)
Q Consensus         5 ~G~~Vv~~~r~~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~--------   71 (181)
                      .|.++.+.+||++++++.++.+...     .+...+.||.+|++++.+...+     -.+||||+|+..-+.        
T Consensus        32 ~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~-----~~vivN~vGPyR~hGE~VVkaci  106 (423)
T KOG2733|consen   32 EGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQ-----ARVIVNCVGPYRFHGEPVVKACI  106 (423)
T ss_pred             cCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhh-----hEEEEeccccceecCcHHHHHHH
Confidence            6788999999999999998877542     2333889999999999999995     468999999854321        


Q ss_pred             ---CCcccCC-HHHHHHhhheeec
Q 042200           72 ---RTTLDTD-NEKVKRVMIMVVF   91 (181)
Q Consensus        72 ---~~~~~~~-~~~~~~~~~~n~~   91 (181)
                         .+..+++ +-.|.+.++.++.
T Consensus       107 enG~~~vDISGEP~f~E~mq~kYh  130 (423)
T KOG2733|consen  107 ENGTHHVDISGEPQFMERMQLKYH  130 (423)
T ss_pred             HcCCceeccCCCHHHHHHHHHHHH
Confidence               1122332 2346666666665

>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]

Probab=96.30  E-value=0.015  Score=42.52  Aligned_cols=105  Identities=12%  Similarity=0.086  Sum_probs=65.9

Q ss_pred             eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc--CCHHHHHHhhheeec-------ceeEEEecccc-ccc
Q 042200           36 CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD--TDNEKVKRVMIMVVF-------LGVLLFTANLA-TET  105 (181)
Q Consensus        36 ~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~--~~~~~~~~~~~~n~~-------~~~iv~iss~~-~~~  105 (181)
                      .+|+++.++.+.+|+.   .++.+|||.|+..+.   -+..  .+.+-|+..+.+|-.       .|.+-.+|..+ +..
T Consensus        38 d~DLt~~a~t~~lF~~---ekPthVIhlAAmVGG---lf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIf  111 (315)
T KOG1431|consen   38 DADLTNLADTRALFES---EKPTHVIHLAAMVGG---LFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIF  111 (315)
T ss_pred             cccccchHHHHHHHhc---cCCceeeehHhhhcc---hhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeec
Confidence            6899999999999997   467899999987653   3322  355777777765544       33222222211 111


Q ss_pred             c-----------------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          106 I-----------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       106 ~-----------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +                 .|....|+.+|..+.-..+.++.+++.   ....+-|-.+..|
T Consensus       112 Pdkt~yPIdEtmvh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~---~~tsviPtNvfGp  169 (315)
T KOG1431|consen  112 PDKTSYPIDETMVHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGR---DYTSVIPTNVFGP  169 (315)
T ss_pred             CCCCCCCCCHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCC---ceeeeccccccCC
Confidence            1                 123346999998888778888888853   4444445444443

>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]

Probab=96.25  E-value=0.023  Score=43.10  Aligned_cols=113  Identities=13%  Similarity=0.101  Sum_probs=71.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCC--CcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDR--TTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~--~~~~~~   78 (181)
                      +|++.|-+|++=.|..+.--...+-+...+++.++..|+.|+++|+++++.     -++|||..|--.+. +  .+.+..
T Consensus        80 klak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~-----sNVVINLIGrd~eT-knf~f~Dvn  153 (391)
T KOG2865|consen   80 KLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKH-----SNVVINLIGRDYET-KNFSFEDVN  153 (391)
T ss_pred             HHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHh-----CcEEEEeecccccc-CCccccccc
Confidence            478899999999997554333333333337899999999999999999995     47999999964432 2  233333


Q ss_pred             HHHHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHH
Q 042200           79 NEKVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVL  121 (181)
Q Consensus        79 ~~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~  121 (181)
                      ....++.-.++-.  --++|.+|+..+....  .+-|=.+|++.+
T Consensus       154 ~~~aerlAricke~GVerfIhvS~Lganv~s--~Sr~LrsK~~gE  196 (391)
T KOG2865|consen  154 VHIAERLARICKEAGVERFIHVSCLGANVKS--PSRMLRSKAAGE  196 (391)
T ss_pred             chHHHHHHHHHHhhChhheeehhhccccccC--hHHHHHhhhhhH
Confidence            3333333333333  2378888887755322  233445555544

>PRK12320 hypothetical protein; Provisional

Probab=96.18  E-value=0.025  Score=48.26  Aligned_cols=115  Identities=14%  Similarity=0.054  Sum_probs=65.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+....      ..  ..+.++.+|+++.. +..++.     ++|+|||+|+....  ... ......
T Consensus        20 Ll~~G~~Vi~ldr~~~~~------~~--~~ve~v~~Dl~d~~-l~~al~-----~~D~VIHLAa~~~~--~~~-~vNv~G   82 (699)
T PRK12320         20 LIAAGHTVSGIAQHPHDA------LD--PRVDYVCASLRNPV-LQELAG-----EADAVIHLAPVDTS--APG-GVGITG   82 (699)
T ss_pred             HHhCCCEEEEEeCChhhc------cc--CCceEEEccCCCHH-HHHHhc-----CCCEEEEcCccCcc--chh-hHHHHH
Confidence            678899999999865421      11  25788999999973 444443     48999999986422  111 011111


Q ss_pred             HHHhhheeec-ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           82 VKRVMIMVVF-LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        82 ~~~~~~~n~~-~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ..+.++.... +.++|++||..+   .+  ..|.    ..+.++    ..   .++.+..++|+.+..+
T Consensus        83 t~nLleAA~~~GvRiV~~SS~~G---~~--~~~~----~aE~ll----~~---~~~p~~ILR~~nVYGp  135 (699)
T PRK12320         83 LAHVANAAARAGARLLFVSQAAG---RP--ELYR----QAETLV----ST---GWAPSLVIRIAPPVGR  135 (699)
T ss_pred             HHHHHHHHHHcCCeEEEEECCCC---CC--cccc----HHHHHH----Hh---cCCCEEEEeCceecCC
Confidence            1122211111 347888887532   11  1122    123322    22   2478899999988887

>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated

Probab=96.04  E-value=0.013  Score=46.79  Aligned_cols=57  Identities=11%  Similarity=0.040  Sum_probs=42.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |+++|++|++++++.+ ..     ..    .....+|+++.+++.+.+.+ .++++|++|||||+...
T Consensus       224 l~~~Ga~V~~v~~~~~-~~-----~~----~~~~~~dv~~~~~~~~~v~~-~~~~~DilI~~Aav~d~  280 (399)
T PRK05579        224 AARRGADVTLVSGPVN-LP-----TP----AGVKRIDVESAQEMLDAVLA-ALPQADIFIMAAAVADY  280 (399)
T ss_pred             HHHCCCEEEEeCCCcc-cc-----CC----CCcEEEccCCHHHHHHHHHH-hcCCCCEEEEccccccc
Confidence            6789999999998752 11     11    11346799999998888875 45789999999998654

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=95.68  E-value=0.044  Score=39.19  Aligned_cols=60  Identities=8%  Similarity=0.082  Sum_probs=44.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |++.|++|++++|+.+++++..+.+..........+|..+.+++...+..     .|+||++...
T Consensus        48 l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~diVi~at~~  107 (194)
T cd01078          48 LAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKG-----ADVVFAAGAA  107 (194)
T ss_pred             HHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhc-----CCEEEECCCC
Confidence            56789999999999998888877664322344566788898888877763     6888886654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=95.65  E-value=0.02  Score=43.81  Aligned_cols=61  Identities=13%  Similarity=0.152  Sum_probs=44.7

Q ss_pred             cccCCCE-EEEeecch---HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRAK-VIIADVQD---DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++.|++ |++++|+.   ++++++.+++... ..+....+|+++.+++...+.     ..|+||||....
T Consensus       145 La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~-----~~DilINaTp~G  210 (289)
T PRK12548        145 CALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIA-----SSDILVNATLVG  210 (289)
T ss_pred             HHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhc-----cCCEEEEeCCCC
Confidence            5688986 99999986   6777777766442 345566788888777766655     369999988653

>COG4982 3-oxoacyl-[acyl-carrier protein]

Probab=95.42  E-value=0.18  Score=42.26  Aligned_cols=143  Identities=13%  Similarity=0.083  Sum_probs=88.5

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-----CceEEEeeecCChhHHHHHHHh----cc-----------cC-Ccc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-----ELISYVCCNVTIDSDVKNVFDF----TK-----------FG-KLD   58 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-----~~~~~~~~D~~~~~~i~~~~~~----~~-----------~~-~id   58 (181)
                      +|++-|+.||++..+ .+...+..+.+...     ...-++..++.+..+++.+++.    ++           .+ .+|
T Consensus       416 ~LL~gGAtVI~TTS~~s~~r~efyr~LYa~~a~~ga~LwvVpaN~~SysDVdAlIewIg~eq~~t~g~~s~~~k~a~~pt  495 (866)
T COG4982         416 RLLAGGATVIATTSRLSEERTEFYRSLYARHARYGAALWVVPANMGSYSDVDALIEWIGDEQTETVGPQSIHIKLAWTPT  495 (866)
T ss_pred             HHHhCCcEEEEEcccccHHHHHHHHHHHHhhCCCCceEEEEeccccchhhHHHHHHHhccccccccCCcceecccccCcc
Confidence            378899999988776 34444444444221     4566678899999999888887    22           11 378


Q ss_pred             EEEEcccccCCCCCCcccCCH--HHHHHhhheeec-----------------ceeEEEecccccccc-CccchhhHhhHH
Q 042200           59 IMFNNAGIISNMDRTTLDTDN--EKVKRVMIMVVF-----------------LGVLLFTANLATETI-GEALYDYLMSKY  118 (181)
Q Consensus        59 ~vi~~ag~~~~~~~~~~~~~~--~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~-~~~~~~y~~sK~  118 (181)
                      .+|-.|++...  +.+.+...  +.-.+++-.|+.                 +-++|.=.|.  .++ +.+-..|+.+|+
T Consensus       496 ll~PFAAp~v~--G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~~R~hVVLPgSP--NrG~FGgDGaYgEsK~  571 (866)
T COG4982         496 LLFPFAAPRVS--GELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVDTRLHVVLPGSP--NRGMFGGDGAYGESKL  571 (866)
T ss_pred             eeeecccCCcc--CccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcccceEEEecCCC--CCCccCCCcchhhHHH
Confidence            88888887665  55555443  334455555554                 3345544442  222 345568999999


Q ss_pred             HHHHHHHHHHHHhc-CCCeEEEEEecCccc
Q 042200          119 AVLGLMKNLCVELG-QYDIRVNSIAHIVSA  147 (181)
Q Consensus       119 a~~~l~~~la~~~~-~~~i~v~~i~Pg~v~  147 (181)
                      +++.++.-|..|-. ...+++..-.-|++.
T Consensus       572 aldav~~RW~sEs~Wa~~vsl~~A~IGWtr  601 (866)
T COG4982         572 ALDAVVNRWHSESSWAARVSLAHALIGWTR  601 (866)
T ss_pred             HHHHHHHHhhccchhhHHHHHhhhheeeec
Confidence            99999887766532 112445555556665

>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]

Probab=95.03  E-value=0.012  Score=43.62  Aligned_cols=143  Identities=10%  Similarity=-0.061  Sum_probs=84.1

Q ss_pred             cccCCCEEEEeecchHHHHHH-HhHcCCC------CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQDDLCRAL-CKEFDSD------ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~-~~~~~~~------~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+..|+.|..+-|.....+.. ...+-.+      +.....-.|++|...+.++++.   -+++-|.|.|+-.+.. -+|
T Consensus        48 LL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~---ikPtEiYnLaAQSHVk-vSF  123 (376)
T KOG1372|consen   48 LLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLIST---IKPTEVYNLAAQSHVK-VSF  123 (376)
T ss_pred             HHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhc---cCchhhhhhhhhcceE-EEe
Confidence            578999999998865444322 3333221      5788888999999999999996   3467788888865541 111


Q ss_pred             --ccCC-------HHHHHHhhhee-ecceeEEEecccccccc------------CccchhhHhhHHHHHHHHHHHHHHh-
Q 042200           75 --LDTD-------NEKVKRVMIMV-VFLGVLLFTANLATETI------------GEALYDYLMSKYAVLGLMKNLCVEL-  131 (181)
Q Consensus        75 --~~~~-------~~~~~~~~~~n-~~~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~l~~~la~~~-  131 (181)
                        .+.+       .-.+.+.+..+ +..+.-.+-.|.....+            .-+.++|+++|-+..=++-.++..| 
T Consensus       124 dlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFyPRSPYa~aKmy~~WivvNyREAYn  203 (376)
T KOG1372|consen  124 DLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFYPRSPYAAAKMYGYWIVVNYREAYN  203 (376)
T ss_pred             ecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCCCCChhHHhhhhheEEEEEhHHhhc
Confidence              1111       11122222222 22444455555444433            3467889999976544444444444 


Q ss_pred             --cCCCeEEEEEecCcccC
Q 042200          132 --GQYDIRVNSIAHIVSAT  148 (181)
Q Consensus       132 --~~~~i~v~~i~Pg~v~t  148 (181)
                        +-.||-.|.=+|.-=.+
T Consensus       204 mfAcNGILFNHESPRRGen  222 (376)
T KOG1372|consen  204 MFACNGILFNHESPRRGEN  222 (376)
T ss_pred             ceeeccEeecCCCCccccc
Confidence              34678888877754333

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=94.60  E-value=0.43  Score=34.01  Aligned_cols=129  Identities=9%  Similarity=-0.018  Sum_probs=77.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcc--cCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL--DTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~--~~~~   79 (181)
                      ..++|+.|..+.||..+....       ..+..++.|+.|.+++.+.+.     +.|+||..-|....  ....  ....
T Consensus        20 A~~RGHeVTAivRn~~K~~~~-------~~~~i~q~Difd~~~~a~~l~-----g~DaVIsA~~~~~~--~~~~~~~k~~   85 (211)
T COG2910          20 ALKRGHEVTAIVRNASKLAAR-------QGVTILQKDIFDLTSLASDLA-----GHDAVISAFGAGAS--DNDELHSKSI   85 (211)
T ss_pred             HHhCCCeeEEEEeChHhcccc-------ccceeecccccChhhhHhhhc-----CCceEEEeccCCCC--ChhHHHHHHH
Confidence            357999999999999888654       157789999999999877777     47999998887643  2111  1111


Q ss_pred             HHHHHhhheeecceeEEEeccccccccC--------c--cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           80 EKVKRVMIMVVFLGVLLFTANLATETIG--------E--ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        80 ~~~~~~~~~n~~~~~iv~iss~~~~~~~--------~--~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +.+-..++..- ..+++.++..+.+.-.        |  +...|..+++..+ +.+.|..+-   ++.-+-++|.....|
T Consensus        86 ~~li~~l~~ag-v~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~~ae-~L~~Lr~~~---~l~WTfvSPaa~f~P  160 (211)
T COG2910          86 EALIEALKGAG-VPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALAQAE-FLDSLRAEK---SLDWTFVSPAAFFEP  160 (211)
T ss_pred             HHHHHHHhhcC-CeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHHHHH-HHHHHhhcc---CcceEEeCcHHhcCC
Confidence            22222221111 3466666665443321        2  2223455555444 344555444   477778888766655

>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]

Probab=94.45  E-value=0.63  Score=34.61  Aligned_cols=112  Identities=12%  Similarity=0.012  Sum_probs=71.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCC-cccCCH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRT-TLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~-~~~~~~   79 (181)
                      +|+++|++|.+..|+.+......    .  .+.+...|+.+...+...+.     ++|.+++..+....  .. +.....
T Consensus        19 ~L~~~~~~v~~~~r~~~~~~~~~----~--~v~~~~~d~~~~~~l~~a~~-----G~~~~~~i~~~~~~--~~~~~~~~~   85 (275)
T COG0702          19 ELLARGHEVRAAVRNPEAAAALA----G--GVEVVLGDLRDPKSLVAGAK-----GVDGVLLISGLLDG--SDAFRAVQV   85 (275)
T ss_pred             HHHhCCCEEEEEEeCHHHHHhhc----C--CcEEEEeccCCHhHHHHHhc-----cccEEEEEeccccc--ccchhHHHH
Confidence            36788999999999998887765    2  68899999999999998888     47888888886542  22 111111


Q ss_pred             HHHHHhhhe-eecceeEEEeccccccccCccchhhHhhHHHHHHHHHHH
Q 042200           80 EKVKRVMIM-VVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        80 ~~~~~~~~~-n~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~l  127 (181)
                      .......+. .....+++.+|...+..  .....|..+|...+...++.
T Consensus        86 ~~~~~~a~~a~~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~e~~l~~s  132 (275)
T COG0702          86 TAVVRAAEAAGAGVKHGVSLSVLGADA--ASPSALARAKAAVEAALRSS  132 (275)
T ss_pred             HHHHHHHHHhcCCceEEEEeccCCCCC--CCccHHHHHHHHHHHHHHhc
Confidence            111111111 11134566666554333  23467888888877655433

>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]

Probab=94.14  E-value=0.71  Score=37.04  Aligned_cols=145  Identities=14%  Similarity=0.057  Sum_probs=83.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHH-HHHHHhcccCCccEEEEcccccCCCC--CCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDV-KNVFDFTKFGKLDIMFNNAGIISNMD--RTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i-~~~~~~~~~~~id~vi~~ag~~~~~~--~~~~~~   77 (181)
                      +|.++|+.|.++.|+.++.++............-+..|.....++ ..+++... -...+++-++|..+..+  ..-...
T Consensus        98 ~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~-~~~~~v~~~~ggrp~~ed~~~p~~V  176 (411)
T KOG1203|consen   98 ILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVP-KGVVIVIKGAGGRPEEEDIVTPEKV  176 (411)
T ss_pred             HHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhcc-ccceeEEecccCCCCcccCCCccee
Confidence            378899999999999988887766111112444555555554444 33444211 12457777777765521  122235


Q ss_pred             CHHHHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHH--HHHHHHhcCCCeEEEEEecCcccCc
Q 042200           78 DNEKVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLM--KNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~--~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +++...+.++..-.  -.+++.++++.+....+....+..   ....+.  +.....+...|+.-..|+||....+
T Consensus       177 D~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~---~~~~~~~k~~~e~~~~~Sgl~ytiIR~g~~~~~  249 (411)
T KOG1203|consen  177 DYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLL---NGLVLKAKLKAEKFLQDSGLPYTIIRPGGLEQD  249 (411)
T ss_pred             cHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhh---hhhhhHHHHhHHHHHHhcCCCcEEEeccccccC
Confidence            66666776666544  458888888766544333332331   111111  1223344567899999999987764

>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic

Probab=93.53  E-value=0.083  Score=42.15  Aligned_cols=57  Identities=12%  Similarity=0.111  Sum_probs=40.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHH-HHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDV-KNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i-~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |.++|++|+++.++....      ...    ....+|+++.+++ +.++++ .++.+|++|+|||....
T Consensus       221 ~~~~Ga~V~~~~g~~~~~------~~~----~~~~~~v~~~~~~~~~~~~~-~~~~~D~~i~~Aavsd~  278 (390)
T TIGR00521       221 AYKRGADVTLITGPVSLL------TPP----GVKSIKVSTAEEMLEAALNE-LAKDFDIFISAAAVADF  278 (390)
T ss_pred             HHHCCCEEEEeCCCCccC------CCC----CcEEEEeccHHHHHHHHHHh-hcccCCEEEEccccccc
Confidence            567899999888754321      111    2256899999998 666644 33679999999999655

This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.

>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]

Probab=91.44  E-value=1.1  Score=36.58  Aligned_cols=109  Identities=12%  Similarity=0.128  Sum_probs=64.5

Q ss_pred             CceEEEeeecCCh------hHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec------------
Q 042200           30 ELISYVCCNVTID------SDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------   91 (181)
Q Consensus        30 ~~~~~~~~D~~~~------~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------   91 (181)
                      .++..+.+|++++      .+.+.+.+     .+|+|||+||....         .+.++..+.+|..            
T Consensus        79 ~Kv~pi~GDi~~~~LGis~~D~~~l~~-----eV~ivih~AAtvrF---------de~l~~al~iNt~Gt~~~l~lak~~  144 (467)
T KOG1221|consen   79 EKVVPIAGDISEPDLGISESDLRTLAD-----EVNIVIHSAATVRF---------DEPLDVALGINTRGTRNVLQLAKEM  144 (467)
T ss_pred             ecceeccccccCcccCCChHHHHHHHh-----cCCEEEEeeeeecc---------chhhhhhhhhhhHhHHHHHHHHHHh
Confidence            5788889999884      33342333     58999999998654         1223344444444            


Q ss_pred             --ceeEEEecccccccc--------Cc--------------------------------cchhhHhhHHHHHHHHHHHHH
Q 042200           92 --LGVLLFTANLATETI--------GE--------------------------------ALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        92 --~~~iv~iss~~~~~~--------~~--------------------------------~~~~y~~sK~a~~~l~~~la~  129 (181)
                        -..++.+|+..+...        ++                                ....|.-+|+-.+.+..    
T Consensus       145 ~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~----  220 (467)
T KOG1221|consen  145 VKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQ----  220 (467)
T ss_pred             hhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHH----
Confidence              345777776554311        10                                11234444544444332    


Q ss_pred             HhcCCCeEEEEEecCcccCcccchhcCC
Q 042200          130 ELGQYDIRVNSIAHIVSATPFFCNAMGI  157 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~~~~~~~  157 (181)
                      .+ +.++.+..++|..|...+..+++++
T Consensus       221 ~~-~~~lPivIiRPsiI~st~~EP~pGW  247 (467)
T KOG1221|consen  221 KE-AENLPLVIIRPSIITSTYKEPFPGW  247 (467)
T ss_pred             hh-ccCCCeEEEcCCceeccccCCCCCc
Confidence            12 3478999999999988877666554

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=91.24  E-value=0.31  Score=32.72  Aligned_cols=56  Identities=21%  Similarity=0.294  Sum_probs=37.8

Q ss_pred             cccCCCE-EEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAK-VIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++.|++ |.++.|+.++++++.+.+.. ..+.++  ++.   ++...+.     ..|+||++.+...
T Consensus        31 L~~~g~~~i~i~nRt~~ra~~l~~~~~~-~~~~~~--~~~---~~~~~~~-----~~DivI~aT~~~~   87 (135)
T PF01488_consen   31 LAALGAKEITIVNRTPERAEALAEEFGG-VNIEAI--PLE---DLEEALQ-----EADIVINATPSGM   87 (135)
T ss_dssp             HHHTTSSEEEEEESSHHHHHHHHHHHTG-CSEEEE--EGG---GHCHHHH-----TESEEEE-SSTTS
T ss_pred             HHHcCCCEEEEEECCHHHHHHHHHHcCc-ccccee--eHH---HHHHHHh-----hCCeEEEecCCCC
Confidence            5678887 99999999999999888843 123333  333   3334444     4799999988643

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>COG3268 Uncharacterized conserved protein [Function unknown]

Probab=90.97  E-value=0.25  Score=38.36  Aligned_cols=59  Identities=10%  Similarity=0.121  Sum_probs=44.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |+.+|..-++.+||.+++..+..++..  ++..+.+.+  +..++..++     +.++|+||+|+...
T Consensus        26 l~~~g~~~aLAgRs~~kl~~l~~~LG~--~~~~~p~~~--p~~~~~~~~-----~~~VVlncvGPyt~   84 (382)
T COG3268          26 LAREGLTAALAGRSSAKLDALRASLGP--EAAVFPLGV--PAALEAMAS-----RTQVVLNCVGPYTR   84 (382)
T ss_pred             HHHcCCchhhccCCHHHHHHHHHhcCc--cccccCCCC--HHHHHHHHh-----cceEEEeccccccc
Confidence            677888889999999999999998876  444444443  666666666     46899999998654

>KOG4288 consensus Predicted oxidoreductase [General function prediction only]

Probab=90.85  E-value=0.2  Score=36.89  Aligned_cols=124  Identities=9%  Similarity=0.023  Sum_probs=71.0

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|.++.|+..  +++.+.+..  .+.+...|.-..+-.....     .++..++-++|....      ....+.++
T Consensus        74 ~vv~svgilsen~~--k~~l~sw~~--~vswh~gnsfssn~~k~~l-----~g~t~v~e~~ggfgn------~~~m~~in  138 (283)
T KOG4288|consen   74 NVVHSVGILSENEN--KQTLSSWPT--YVSWHRGNSFSSNPNKLKL-----SGPTFVYEMMGGFGN------IILMDRIN  138 (283)
T ss_pred             hhceeeeEeecccC--cchhhCCCc--ccchhhccccccCcchhhh-----cCCcccHHHhcCccc------hHHHHHhc
Confidence            34667777777654  344454444  5666665554422111111     245666777775543      34445555


Q ss_pred             Hhhheeec-------ceeEEEeccccc-cccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           84 RVMIMVVF-------LGVLLFTANLAT-ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        84 ~~~~~n~~-------~~~iv~iss~~~-~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ...++|..       ..++++||.... ..+.-+. .|-.+|.+.+.=.      +.+++.|-..++||++...
T Consensus       139 g~ani~a~kaa~~~gv~~fvyISa~d~~~~~~i~r-GY~~gKR~AE~El------l~~~~~rgiilRPGFiyg~  205 (283)
T KOG4288|consen  139 GTANINAVKAAAKAGVPRFVYISAHDFGLPPLIPR-GYIEGKREAEAEL------LKKFRFRGIILRPGFIYGT  205 (283)
T ss_pred             cHhhHHHHHHHHHcCCceEEEEEhhhcCCCCccch-hhhccchHHHHHH------HHhcCCCceeeccceeecc
Confidence            55555554       468999986433 2222222 5888888776421      2345678889999999876

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=89.66  E-value=1.1  Score=33.01  Aligned_cols=58  Identities=10%  Similarity=0.068  Sum_probs=42.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |.++|++|++++++++..++..+.-.   .+..+.+|-++.+.++++=-    ...|++|-..|.
T Consensus        19 L~~~g~~Vv~Id~d~~~~~~~~~~~~---~~~~v~gd~t~~~~L~~agi----~~aD~vva~t~~   76 (225)
T COG0569          19 LSEEGHNVVLIDRDEERVEEFLADEL---DTHVVIGDATDEDVLEEAGI----DDADAVVAATGN   76 (225)
T ss_pred             HHhCCCceEEEEcCHHHHHHHhhhhc---ceEEEEecCCCHHHHHhcCC----CcCCEEEEeeCC
Confidence            67899999999999999887544221   47788999999887776622    235666666663

>PRK09620 hypothetical protein; Provisional

Probab=89.55  E-value=0.18  Score=37.20  Aligned_cols=62  Identities=13%  Similarity=0.063  Sum_probs=33.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |+++|++|+++++.......   .+.....+..+..+....+.+.+++.+   .++|+|||+|+....
T Consensus        39 L~~~Ga~V~li~g~~~~~~~---~~~~~~~~~~V~s~~d~~~~l~~~~~~---~~~D~VIH~AAvsD~  100 (229)
T PRK09620         39 LISKGAHVIYLHGYFAEKPN---DINNQLELHPFEGIIDLQDKMKSIITH---EKVDAVIMAAAGSDW  100 (229)
T ss_pred             HHHCCCeEEEEeCCCcCCCc---ccCCceeEEEEecHHHHHHHHHHHhcc---cCCCEEEECccccce
Confidence            67899999988864221110   111111233344422223444554442   357999999998544

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=89.45  E-value=6.7  Score=29.60  Aligned_cols=116  Identities=9%  Similarity=0.053  Sum_probs=60.2

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      .+.|.+|++++++.++.+.. .++..  .   ..+|..+.+....+.......++|.+++++|....             
T Consensus       166 ~~~g~~v~~~~~~~~~~~~~-~~~g~--~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~-------------  226 (325)
T cd08253         166 RWAGARVIATASSAEGAELV-RQAGA--D---AVFNYRAEDLADRILAATAGQGVDVIIEVLANVNL-------------  226 (325)
T ss_pred             HHcCCEEEEEeCCHHHHHHH-HHcCC--C---EEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHH-------------
Confidence            35688888888887766554 33321  1   12355554444444333222469999999874211             


Q ss_pred             HHhhheeecceeEEEecccc------------ccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           83 KRVMIMVVFLGVLLFTANLA------------TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~------------~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      ...++.--..|+++.+++..            ..........|...|.....+.+.+...+....++
T Consensus       227 ~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~  293 (325)
T cd08253         227 AKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALR  293 (325)
T ss_pred             HHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCcc
Confidence            11111111157777776521            00111222246666677777777776666554443

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=88.99  E-value=2.2  Score=42.26  Aligned_cols=105  Identities=11%  Similarity=0.012  Sum_probs=61.2

Q ss_pred             CChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc--CC---HHHHHH------hhheeec---ceeEEEeccccc
Q 042200           40 TIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD--TD---NEKVKR------VMIMVVF---LGVLLFTANLAT  103 (181)
Q Consensus        40 ~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~--~~---~~~~~~------~~~~n~~---~~~iv~iss~~~  103 (181)
                      .+.+++..+++.  ...+.++++||..+...........  .+   .+.++.      .+...+.   ++.++.++...|
T Consensus      1810 ~~~~~~~~~~~~~~~~~~~~~g~i~l~~~~~~~~~~~~~~~~~~~~~~~l~~~f~~ak~~~~~l~~~~~~~~~~vsr~~G 1889 (2582)
T TIGR02813      1810 IDDTSIEAVIKDIEEKTAQIDGFIHLQPQHKSVADKVDAIELPEAAKQSLMLAFLFAKLLNVKLATNARASFVTVSRIDG 1889 (2582)
T ss_pred             cchHHHHHHHHhhhccccccceEEEeccccccccccccccccchhhHHHHHHHHHHHHhhchhhccCCCeEEEEEEecCC
Confidence            345666666655  3456799999988854220011100  01   111111      1111111   467888888776


Q ss_pred             cccCccchhh--------HhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200          104 ETIGEALYDY--------LMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus       104 ~~~~~~~~~y--------~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      -.++......        ....+++-+|+|+++.|+...-+|...+.|.
T Consensus      1890 ~~g~~~~~~~~~~~~~~~~~~~a~l~Gl~Ktl~~E~P~~~~r~vDl~~~ 1938 (2582)
T TIGR02813      1890 GFGYSNGDADSGTQQVKAELNQAALAGLTKTLNHEWNAVFCRALDLAPK 1938 (2582)
T ss_pred             ccccCCccccccccccccchhhhhHHHHHHhHHHHCCCCeEEEEeCCCC
Confidence            6665332221        2357899999999999999877888888775

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=88.74  E-value=1.9  Score=28.20  Aligned_cols=81  Identities=15%  Similarity=0.140  Sum_probs=49.5

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      ...|++|+++++++++.+-+ +++..    . ...|.++.+ +.+.+.+ ....++|++|.|+|..            +.
T Consensus        11 k~~G~~vi~~~~~~~k~~~~-~~~Ga----~-~~~~~~~~~-~~~~i~~~~~~~~~d~vid~~g~~------------~~   71 (130)
T PF00107_consen   11 KAMGAKVIATDRSEEKLELA-KELGA----D-HVIDYSDDD-FVEQIRELTGGRGVDVVIDCVGSG------------DT   71 (130)
T ss_dssp             HHTTSEEEEEESSHHHHHHH-HHTTE----S-EEEETTTSS-HHHHHHHHTTTSSEEEEEESSSSH------------HH
T ss_pred             HHcCCEEEEEECCHHHHHHH-Hhhcc----c-ccccccccc-cccccccccccccceEEEEecCcH------------HH
Confidence            35789999999998887654 44432    1 224555544 3333333 2224799999999932            23


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      ++..++.--..|+++.++...
T Consensus        72 ~~~~~~~l~~~G~~v~vg~~~   92 (130)
T PF00107_consen   72 LQEAIKLLRPGGRIVVVGVYG   92 (130)
T ss_dssp             HHHHHHHEEEEEEEEEESSTS
T ss_pred             HHHHHHHhccCCEEEEEEccC
Confidence            445544433378888887654

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF06962 rRNA_methylase: Putative rRNA methylase; InterPro: IPR010719 This family contains a number of putative rRNA methylases

Probab=88.39  E-value=4.5  Score=27.47  Aligned_cols=119  Identities=13%  Similarity=0.152  Sum_probs=59.8

Q ss_pred             EEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC---CHHH
Q 042200            8 KVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT---DNEK   81 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~---~~~~   81 (181)
                      +|...|-+++.++.+.+.+...   .++.++.   .+-+.+...+..   +++|.++.|=|+.+..+..+...   +...
T Consensus         1 kVyaFDIQ~~Ai~~T~~rL~~~~~~~~v~li~---~sHe~l~~~i~~---~~v~~~iFNLGYLPggDk~i~T~~~TTl~A   74 (140)
T PF06962_consen    1 KVYAFDIQEEAIENTRERLEEAGLEDRVTLIL---DSHENLDEYIPE---GPVDAAIFNLGYLPGGDKSITTKPETTLKA   74 (140)
T ss_dssp             EEEEEES-HHHHHHHHHHHHHTT-GSGEEEEE---S-GGGGGGT--S-----EEEEEEEESB-CTS-TTSB--HHHHHHH
T ss_pred             CEEEEECHHHHHHHHHHHHHhcCCCCcEEEEE---CCHHHHHhhCcc---CCcCEEEEECCcCCCCCCCCCcCcHHHHHH
Confidence            5788888888888887777553   4566664   344556666652   57999999999987622222221   2233


Q ss_pred             HHHhhheeecceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           82 VKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      +++.++.--.+|.|+.+.       +++...=..=+-++..|++.|    .++..+|....+
T Consensus        75 l~~al~lL~~gG~i~iv~-------Y~GH~gG~eE~~av~~~~~~L----~~~~~~V~~~~~  125 (140)
T PF06962_consen   75 LEAALELLKPGGIITIVV-------YPGHPGGKEESEAVEEFLASL----DQKEFNVLKYQF  125 (140)
T ss_dssp             HHHHHHHEEEEEEEEEEE---------STCHHHHHHHHHHHHHHTS-----TTTEEEEEEEE
T ss_pred             HHHHHHhhccCCEEEEEE-------eCCCCCCHHHHHHHHHHHHhC----CcceEEEEEEEc
Confidence            444433322256555443       222332233445566555544    444455555543

; PDB: 3EEY_H 3LBY_A 3MTI_A.

>TIGR00518 alaDH alanine dehydrogenase

Probab=85.88  E-value=6  Score=31.47  Aligned_cols=57  Identities=19%  Similarity=0.212  Sum_probs=37.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |.+.|++|++++|+.++++.....+..  .   +..+..+.+.+.+.+.     ..|+||++++...
T Consensus       186 a~~lGa~V~v~d~~~~~~~~l~~~~g~--~---v~~~~~~~~~l~~~l~-----~aDvVI~a~~~~g  242 (370)
T TIGR00518       186 ANGLGATVTILDINIDRLRQLDAEFGG--R---IHTRYSNAYEIEDAVK-----RADLLIGAVLIPG  242 (370)
T ss_pred             HHHCCCeEEEEECCHHHHHHHHHhcCc--e---eEeccCCHHHHHHHHc-----cCCEEEEccccCC
Confidence            456789999999998877766554432  1   2234555566655554     3699999987643

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=84.17  E-value=2  Score=34.87  Aligned_cols=57  Identities=19%  Similarity=0.257  Sum_probs=37.6

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |+++|++|++++++. +..++...++... .+.++..|..+.     .     .+.+|+||+++|....
T Consensus        24 l~~~G~~V~~~d~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~-----~-----~~~~d~vv~~~g~~~~   81 (450)
T PRK14106         24 LKKLGAKVILTDEKEEDQLKEALEELGEL-GIELVLGEYPEE-----F-----LEGVDLVVVSPGVPLD   81 (450)
T ss_pred             HHHCCCEEEEEeCCchHHHHHHHHHHHhc-CCEEEeCCcchh-----H-----hhcCCEEEECCCCCCC
Confidence            678999999999974 4454444444321 355666777651     1     1458999999997543

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=82.19  E-value=3.6  Score=26.38  Aligned_cols=55  Identities=13%  Similarity=0.045  Sum_probs=37.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.+.+.+|++++++++..+.....     .+.++.+|.++.+.++++=-+    +.+.+|-...
T Consensus        17 L~~~~~~vvvid~d~~~~~~~~~~-----~~~~i~gd~~~~~~l~~a~i~----~a~~vv~~~~   71 (116)
T PF02254_consen   17 LKEGGIDVVVIDRDPERVEELREE-----GVEVIYGDATDPEVLERAGIE----KADAVVILTD   71 (116)
T ss_dssp             HHHTTSEEEEEESSHHHHHHHHHT-----TSEEEES-TTSHHHHHHTTGG----CESEEEEESS
T ss_pred             HHhCCCEEEEEECCcHHHHHHHhc-----ccccccccchhhhHHhhcCcc----ccCEEEEccC
Confidence            445556899999999887776553     367889999998887766332    3566665544

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=81.37  E-value=5.6  Score=36.10  Aligned_cols=51  Identities=12%  Similarity=0.125  Sum_probs=41.9

Q ss_pred             EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            8 KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      .|++++++.+.++++.+.+.   .+..+.+|++|.+++.++++     ++|+||++...
T Consensus       608 lV~VaD~~~~~a~~la~~~~---~~~~v~lDv~D~e~L~~~v~-----~~DaVIsalP~  658 (1042)
T PLN02819        608 HVIVASLYLKDAKETVEGIE---NAEAVQLDVSDSESLLKYVS-----QVDVVISLLPA  658 (1042)
T ss_pred             EEEEECCCHHHHHHHHHhcC---CCceEEeecCCHHHHHHhhc-----CCCEEEECCCc
Confidence            48889999888888777653   36689999999999888887     28999999885

>PF03848 TehB: Tellurite resistance protein TehB; InterPro: IPR015985 Tellurite resistance protein TehB is part of a tellurite-reducing operon tehA and tehB

Probab=81.21  E-value=1.8  Score=31.04  Aligned_cols=82  Identities=11%  Similarity=0.030  Sum_probs=45.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|..+|.++..++.+.+..... ..+....+|+.+.+     +.    +..|+|+. ....    ..+.....+
T Consensus        48 LA~~G~~VtAvD~s~~al~~l~~~a~~~~l~i~~~~~Dl~~~~-----~~----~~yD~I~s-t~v~----~fL~~~~~~  113 (192)
T PF03848_consen   48 LASQGFDVTAVDISPVALEKLQRLAEEEGLDIRTRVADLNDFD-----FP----EEYDFIVS-TVVF----MFLQRELRP  113 (192)
T ss_dssp             HHHTT-EEEEEESSHHHHHHHHHHHHHTT-TEEEEE-BGCCBS------T----TTEEEEEE-ESSG----GGS-GGGHH
T ss_pred             HHHCCCeEEEEECCHHHHHHHHHHHhhcCceeEEEEecchhcc-----cc----CCcCEEEE-EEEe----ccCCHHHHH
Confidence            6899999999999987777654433222 35888888987643     11    34676654 3322    222223334


Q ss_pred             HHHHhhheeec-ceeEEE
Q 042200           81 KVKRVMIMVVF-LGVLLF   97 (181)
Q Consensus        81 ~~~~~~~~n~~-~~~iv~   97 (181)
                      .+.+.++..+. +|.++.
T Consensus       114 ~i~~~m~~~~~pGG~~li  131 (192)
T PF03848_consen  114 QIIENMKAATKPGGYNLI  131 (192)
T ss_dssp             HHHHHHHHTEEEEEEEEE
T ss_pred             HHHHHHHhhcCCcEEEEE
Confidence            55555666666 454443

When present in high copy number, TehB is responsible for potassium tellurite resistance, probably by increasing the reduction rate of tellurite to metallic tellurium within the bacterium. TehB is a cytoplasmic protein which possesses three conserved motifs (I, II, and III) found in S-adenosyl-L-methionine (SAM)-dependent non-nucleic acid methyltransferases []. Conformational changes in TehB are observed upon binding of both tellurite and SAM, suggesting that TehB utilises a methyltransferase activity in the detoxification of tellurite. This entry represents the methyltransferase domain found in all TehB proteins.; PDB: 2KW5_A 3MER_B 3M70_A 2I6G_A 4DQ0_D 2XVA_B 2XVM_A.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	181
2bgk_A	278	X-Ray Structure Of Apo-Secoisolariciresinol Dehydro		2e-37
3tox_A	280	Crystal Structure Of A Short Chain Dehydrogenase In		2e-10
2hsd_A	253	The Refined Three-Dimensional Structure Of 3alpha,2		8e-10
1hdc_A	254	Mechanism Of Inhibition Of 3alpha,20beta-Hydroxyste		8e-10
1iy8_A	267	Crystal Structure Of Levodione Reductase Length = 2		1e-09
1nff_A	260	Crystal Structure Of Rv2002 Gene Product From Mycob		1e-08
1nfr_A	260	Rv2002 Gene Product From Mycobacterium Tuberculosis		3e-08
1yde_A	270	Crystal Structure Of Human Retinal Short-Chain Dehy		4e-08
3uve_A	286	Crystal Structure Of Carveol Dehydrogenase ((+)-Tra		4e-08
3t7c_A	299	Crystal Structure Of Carveol Dehydrogenase From Myc		8e-08
1spx_A	278	Crystal Structure Of Glucose Dehydrogenase Of Caeno		6e-07
3r1i_A	276	Crystal Structure Of A Short-Chain Type Dehydrogena		1e-06
1zjy_A	251	Structure Of R-Specific Alcohol Dehydrogenase (Muta		4e-06
4dqx_A	277	Crystal Structure Of A Short Chain Dehydrogenase Fr		5e-06
3n74_A	261	Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Prote		9e-06
1ahi_A	255	7 Alpha-Hydroxysteroid Dehydrogenase Complexed With		1e-05
3qiv_A	253	Crystal Structure Of A Putative Short-Chain Dehydro		1e-05
4e4y_A	244	The Crystal Structure Of A Short Chain Dehydrogenas		2e-05
1rwb_A	261	Cooperative Effect Of Two Surface Amino Acid Mutati		2e-05
1uls_A	245	Crystal Structure Of Tt0140 From Thermus Thermophil		2e-05
1nxq_A	251	Crystal Structure Of R-Alcohol Dehydrogenase (Radh)		2e-05
2wd7_A	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-05
1g6k_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant E		3e-05
2wd7_B	268	Pteridine Reductase 1 (Ptr1) From Trypanosoma Bruce		3e-05
3bmc_B	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		4e-05
3jq7_B	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		4e-05
3bmc_A	288	Structure Of Pteridine Reductase 1 (Ptr1) From Tryp		4e-05
2c7v_A	268	Structure Of Trypanosoma Brucei Pteridine Reductase		4e-05
3ucx_A	264	The Structure Of A Short Chain Dehydrogenase From M		5e-05
3jq7_A	288	Crystal Structure Of Pteridine Reductase 1 (Ptr1) F		5e-05
1gco_A	261	Crystal Structure Of Glucose Dehydrogenase Complexe		5e-05
1gee_A	261	Crystal Structure Of Glucose Dehydrogenase Mutant Q		6e-05
2cfc_A	250	Structural Basis For Stereo Selectivity In The (R)-		6e-05
2et6_A	604	(3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candid		1e-04
3o4r_A	261	Crystal Structure Of Human DehydrogenaseREDUCTASE (		1e-04
1xhl_A	297	Crystal Structure Of Putative Tropinone Reductase-I		1e-04
3uwr_A	286	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-04
3oec_A	317	Crystal Structure Of Carveol Dehydrogenase From Myc		2e-04
3pgx_A	280	Crystal Structure Of A Putative Carveol Dehydrogena		2e-04
1zem_A	262	Crystal Structure Of Nad+-Bound Xylitol Dehydrogena		3e-04
4fc6_A	277	Studies On Dcr Shed New Light On Peroxisomal Beta-O		3e-04
2zat_A	260	Crystal Structure Of A Mammalian Reductase Length =		3e-04
1k2w_A	256	Crystal Structure Of Sorbitol Dehydrogenase From R.		4e-04
3tsc_A	277	Crystal Structure Of Short Chain Dehydrogenase Map_		5e-04
3ay7_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-04
3aus_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-04
3gaf_A	256	2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid De		5e-04
3ay6_A	269	Crystal Structure Of Bacillus Megaterium Glucose De		5e-04

>pdb|2BGK|A Chain A, X-Ray Structure Of Apo-Secoisolariciresinol Dehydrogenase Length = 278

Iteration: 1
 Score =  151 bits (381), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 20/201 (9%)
Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F+++ AKV+IAD+ DD  + +C    S ++IS+V C+VT D DV+N+ D T  K GKLD
Sbjct: 35  LFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94
Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANL 101
           IMF N G++S    + L+  NE  KRVM + V+                  G ++FTA++
Sbjct: 95  IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASI 154
Query: 102 ATETIGEAL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKK 160
           ++ T GE + + Y  +K+AVLGL  +LC ELG+Y IRVN ++  + A+P   +  G+D  
Sbjct: 155 SSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSS 214
Query: 161 TFKELLYASANLKGVVLKAAD 181
             +EL + +ANLKG +L+A D
Sbjct: 215 RVEELAHQAANLKGTLLRAED 235

>pdb|3TOX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase In Complex With Nad(P) From Sinorhizobium Meliloti 1021 Length = 280

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/136 (34%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 53  KFGKLDIMFNNAGIISNMD----------RTTLDTD------NEKVKRVMIMVVFLGVLL 96
           +FG LD  FNNAG +  M           R TLDT+        K +   I  +  G L 
Sbjct: 82  RFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLT 141
Query: 97  FTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF-FCNA 154
           FT++    T G   +  Y  SK  ++GL++ L VELG   IRVN++    + TP  F N 
Sbjct: 142 FTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANL 201
Query: 155 MGIDKKT--FKELLYA 168
            G   +T  F E L+A
Sbjct: 202 PGAAPETRGFVEGLHA 217

>pdb|2HSD|A Chain A, The Refined Three-Dimensional Structure Of 3alpha,20beta- Hydroxysteroid Dehydrogenase And Possible Roles Of The Residues Conserved In Short-Chain Dehydrogenases Length = 253

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 8   KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAG 65
           +V++ADV D+   A  +E    +   Y   +VTI+ D + V  + +  FG +D + NNAG
Sbjct: 31  RVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG 88
Query: 66  IISNMDRTTLDTDN----EKVKRVMIMVVFLGVLLFTANL-------------ATETIGE 108
           I + M    L+T++     KV  + +  VF+G+      +             A   +G 
Sbjct: 89  ISTGM---FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145
Query: 109 AL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
           AL   Y  SK+ V GL K   VELG   IRVNS+   ++ TP   
Sbjct: 146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA 190

>pdb|1HDC|A Chain A, Mechanism Of Inhibition Of 3alpha,20beta-Hydroxysteroid Dehydrogenase By A Licorice-Derived Steroidal Inhibitor Length = 254

Iteration: 1
 Score = 59.7 bits (143), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 8   KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAG 65
           +V++ADV D+   A  +E    +   Y   +VTI+ D + V  + +  FG +D + NNAG
Sbjct: 31  RVVLADVLDEEGAATARELG--DAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAG 88
Query: 66  IISNMDRTTLDTDN----EKVKRVMIMVVFLGVLLFTANL-------------ATETIGE 108
           I + M    L+T++     KV  + +  VF+G+      +             A   +G 
Sbjct: 89  ISTGM---FLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL 145
Query: 109 AL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
           AL   Y  SK+ V GL K   VELG   IRVNS+   ++ TP   
Sbjct: 146 ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTA 190

>pdb|1IY8|A Chain A, Crystal Structure Of Levodione Reductase Length = 267

Iteration: 1
 Score = 59.7 bits (143), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 23/171 (13%)
Query: 7   AKVIIADVQDD---LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
           AK+ + DV  +     +A   E   D  +     +V+ ++ V+     T  +FG++D  F
Sbjct: 38  AKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFF 97
Query: 62  NNAGIISNMDRTTLDTDNE--KVKRVMIMVVFLGV--------------LLFTANLAT-E 104
           NNAGI    + T   T  E  KV  + +  VFLG+              ++ TA++    
Sbjct: 98  NNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIR 157
Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
            IG     Y  +K+ V+GL +N  VE G+Y IR+N+IA     TP   N+M
Sbjct: 158 GIGN-QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSM 207

>pdb|1NFF|A Chain A, Crystal Structure Of Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDI 59
            +   AKV+  D+ D+  +A+  E        YV  +VT  +  K   D   T FG L +
Sbjct: 27  MVAEGAKVVFGDILDEEGKAMAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84
Query: 60  MFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGE--------- 108
           + NNAGI  I  ++   L T+ +++  V +  VFLG+      +     G          
Sbjct: 85  LVNNAGILNIGTIEDYAL-TEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEG 143
Query: 109 -----ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
                A + Y  +K+AV GL K+  +ELG   IRVNSI   +  TP 
Sbjct: 144 LAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPM 190

>pdb|1NFR|A Chain A, Rv2002 Gene Product From Mycobacterium Tuberculosis Length = 260

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 3   IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDIM 60
           +   AKV+  D+ D+  +A   E        YV  +VT  +  K   D   T FG L ++
Sbjct: 28  VAEGAKVVFGDILDEEGKAXAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85
Query: 61  FNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGE---------- 108
            NNAGI  I  ++   L T+ +++  V +  VFLG+            G           
Sbjct: 86  VNNAGILNIGTIEDYAL-TEWQRILDVNLTGVFLGIRAVVKPXKEAGRGSIINISSIEGL 144
Query: 109 ----ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
               A + Y  +K+AV GL K+  +ELG   IRVNSI   +  TP
Sbjct: 145 AGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTP 189

>pdb|1YDE|A Chain A, Crystal Structure Of Human Retinal Short-Chain DehydrogenaseREDUCTASE 3 Length = 270

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
            F+   A+V+I D  +   RAL +E        ++ C+VT + DVK +   T  +FG+LD
Sbjct: 28  AFVNSGARVVICDKDESGGRALEQELPG---AVFILCDVTQEDDVKTLVSETIRRFGRLD 84
Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA--------------NLAT- 103
            + NNAG      R   +  + +  R ++ +  LG    T               N+++ 
Sbjct: 85  CVVNNAGHHPPPQRP--EETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSL 142
Query: 104 -ETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
              IG+A    Y+ +K AV  + K L ++   Y +RVN I+     TP +
Sbjct: 143 VGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLW 192

>pdb|3UVE|A Chain A, Crystal Structure Of Carveol Dehydrogenase ((+)-Trans-Carveol Dehydrogenase) From Mycobacterium Avium Length = 286

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 32/149 (21%)
Query: 34  YVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLG 93
           Y      +DS V+      + G+LDI+  NAGI +  D  TLD  +E+    MI +   G
Sbjct: 88  YDALKAAVDSGVE------QLGRLDIIVANAGIGNGGD--TLDKTSEEDWTEMIDINLAG 139
Query: 94  V-------------------LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
           V                   ++ T+++           Y+ +K+ V+GLM+   VELGQ+
Sbjct: 140 VWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQH 199
Query: 135 DIRVNSIAHIVSATPFFCNAMGIDKKTFK 163
            IRVNS+      TP   N     + TFK
Sbjct: 200 MIRVNSVHPTHVKTPMLHN-----EGTFK 223

>pdb|3T7C|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Bound To Nad Length = 299

Iteration: 1
 Score = 53.1 bits (126), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 52  TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLA--------- 102
           T+ G+LDI+  NA + S  + T L+  + K  R MI V   G  + TA +A         
Sbjct: 113 TQLGRLDIVLANAALAS--EGTRLNRMDPKTWRDMIDVNLNGAWI-TARVAIPHIMAGKR 169
Query: 103 ------TETIG-----EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                 T +IG     E + +Y+ SK+ + GLM+ + +ELG  +IRVN +     ATP  
Sbjct: 170 GGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPML 229
Query: 152 CN 153
            N
Sbjct: 230 LN 231

>pdb|1SPX|A Chain A, Crystal Structure Of Glucose Dehydrogenase Of Caenorhabditis Elegans In The Apo-Form Length = 278

Iteration: 1
 Score = 50.4 bits (119), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 1   VFIQHRAKVII----ADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KF 54
           +F +  AKV I    A+  ++  + +     S++ ++ V  +VT D+    +   T  KF
Sbjct: 25  LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84
Query: 55  GKLDIMFNNAG--IISNMDRTTLDTDNEKVK-------RVMIMVVFLGVLLFTANLAT-- 103
           GKLDI+ NNAG  I  +  +T      E          R +I +    V   ++      
Sbjct: 85  GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIV 144
Query: 104 --ETIGEALYD------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
              +I   L+       Y ++K A+    +N  ++L Q+ IRVNSI+  + AT  F +AM
Sbjct: 145 NISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVAT-GFGSAM 203
Query: 156 GIDKKTFKELLYASANLK 173
           G+ ++T K+     A +K
Sbjct: 204 GMPEETSKKFYSTMATMK 221

>pdb|3R1I|A Chain A, Crystal Structure Of A Short-Chain Type DehydrogenaseREDUCTASE FROM Mycobacterium Marinum Length = 276

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 24/128 (18%)
Query: 37  CNVTIDSDVKNVFD--FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVF 91
           C+VT    V+ + D    + G +DI   NAGI+S   +  LD   E+ +R+    +  VF
Sbjct: 88  CDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV--QAMLDMPLEEFQRIQDTNVTGVF 145
Query: 92  L---------------GVLLFTANLATE--TIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
           L               G ++ TA+++     I + +  Y  SK AV+ L K + VEL  +
Sbjct: 146 LTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPH 205
Query: 135 DIRVNSIA 142
            IRVNS++
Sbjct: 206 QIRVNSVS 213

>pdb|1ZJY|A Chain A, Structure Of R-Specific Alcohol Dehydrogenase (Mutant G37d) From Lactobacillus Brevis In Complex With Phenylethanol And Nadh Length = 251

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 20/178 (11%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
           F++  AKV+I D   D+     K   + + I +   + + +     +FD T+  FG +  
Sbjct: 26  FVEEGAKVMITDRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85
Query: 60  MFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG----------- 107
           + NNAGI  N     T   +  K+  V +  VF G  L    +  + +G           
Sbjct: 86  LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG 145
Query: 108 ----EALYDYLMSKYAVLGLMKNLCVE--LGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
                +L  Y  SK AV  + K+  ++  L  YD+RVN++      TP   +  G ++
Sbjct: 146 FVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE 203

>pdb|4DQX|A Chain A, Crystal Structure Of A Short Chain Dehydrogenase From Rhizobium Etli Cfn 42 Length = 277

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 40/170 (23%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           +F ++ A V++ADV +D    +  E  S      V  +V+   D ++  + T  K+G++D
Sbjct: 46  LFAKNGAYVVVADVNEDAAVRVANEIGSKAF--GVRVDVSSAKDAESXVEKTTAKWGRVD 103
Query: 59  IMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL---------------GVLLFTANLA 102
           ++ NNAG  +  +  T+  +  +++  V +  +FL                ++  T+  A
Sbjct: 104 VLVNNAGFGTTGNVVTIPEETWDRIXSVNVKGIFLCSKYVIPVXRRNGGGSIINTTSYTA 163
Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
           T  I +    Y+ SK A+  L +    +  +  IRVN++A     +P+F 
Sbjct: 164 TSAIADRTA-YVASKGAISSLTRAXAXDHAKEGIRVNAVAPGTIDSPYFT 212

>pdb|3N74|A Chain A, Crystal Structure Of 3-Ketoacyl-(Acyl-Carrier-Protein) Reduc Brucella Melitensis Length = 261

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/185 (25%), Positives = 72/185 (38%), Gaps = 24/185 (12%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
           F +  AKV+I D        +  E     L      +   D D       +KFGK+DI+ 
Sbjct: 29  FAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDILV 88
Query: 62  NNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA-------------------NLA 102
           NNAGI        L  + E+  R+ + V   GV L T+                   N+A
Sbjct: 89  NNAGIGHKPQNAEL-VEPEEFDRI-VGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVA 146
Query: 103 TETIGEA---LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
           +   G     L  Y  +K  V+ + K L +EL    IRV ++  +   TP     MG D 
Sbjct: 147 STGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDS 206
Query: 160 KTFKE 164
           +  ++
Sbjct: 207 EEIRK 211

>pdb|1AHI|A Chain A, 7 Alpha-Hydroxysteroid Dehydrogenase Complexed With Nadh And 7-Oxo Glycochenodeoxycholic Acid Length = 255

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVC-CNVTIDSDVKNVFDF--TKFGKLD 58
           F    A V+++D+  D    +  E       ++ C C++T + ++  + DF  +K GK+D
Sbjct: 31  FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90
Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL-----------------GVLLFTANL 101
           I+ NNAG          D      +R   + VF                  GV+L   ++
Sbjct: 91  ILVNNAG---GGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSM 147
Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           A E     +  Y  SK A   L++N+  +LG+ +IRVN IA
Sbjct: 148 AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIA 188

>pdb|3QIV|A Chain A, Crystal Structure Of A Putative Short-Chain Dehydrogenase Or 3- Oxoacyl-[acyl-Carrier-Protein] Reductase From Mycobacterium Paratuberculosis Atcc Baa-968 K-10 Length = 253

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 22/160 (13%)
Query: 4   QHRAKVIIADVQDDLCRALCKEF--DSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           +  A V++AD+  +   A+ K+   D    IS V  +V+     K + D T  +FG +D 
Sbjct: 31  REGAAVVVADINAEAAEAVAKQIVADGGTAIS-VAVDVSDPESAKAMADRTLAEFGGIDY 89
Query: 60  MFNNAGIISNMDRTTLDT-DNEKVKRVMIMVVFLGVLLFTANL---ATETIGEALYD--- 112
           + NNA I   M    L T D E  K+ M  V   G L  T  +    T+  G A+ +   
Sbjct: 90  LVNNAAIFGGMKLDFLLTIDPEYYKKFM-SVNLDGALWCTRAVYKKMTKRGGGAIVNQSS 148
Query: 113 ---------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAH 143
                    Y ++K  + GL + L  ELG  +IR+N+IA 
Sbjct: 149 TAAWLYSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAP 188

>pdb|4E4Y|A Chain A, The Crystal Structure Of A Short Chain Dehydrogenase Family Protein From Francisella Tularensis Subsp. Tularensis Schu S4 Length = 244

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 17/129 (13%)
Query: 28  SDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMI 87
           S E + ++  ++T   D+ NV D  K    D +F NAGI+  +  +  D D E +K+V+ 
Sbjct: 42  SAENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGIL--IKGSIFDIDIESIKKVLD 99
Query: 88  MVVFLGVLLFTANLATETIGEAL---------------YDYLMSKYAVLGLMKNLCVELG 132
           + V+  +           +G ++               + Y +SK A+    K+L ++L 
Sbjct: 100 LNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQXTKSLALDLA 159
Query: 133 QYDIRVNSI 141
           +Y IRVN++
Sbjct: 160 KYQIRVNTV 168

>pdb|1RWB|A Chain A, Cooperative Effect Of Two Surface Amino Acid Mutations (Q252l And E170k) Of Glucose Dehydrogenase From Bacillus Megaterium Iwg3 For The Stabilization Of Oligomeric State Length = 261

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2   FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
           F   +AKV++    ++D   ++ +E      E I+ V  +VT++SDV N+      +FGK
Sbjct: 27  FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57  LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
           LD+M NNAG+ + +    +  +D  KV    +   FLG    +  F  N           
Sbjct: 86  LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             E I   L+  Y  SK  +  + K L +E     IRVN+I      TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTKTLALEYAPKGIRVNNIGPGAINTP 194

>pdb|1ULS|A Chain A, Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8 Length = 245

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 71/158 (44%), Gaps = 20/158 (12%)
Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIM 60
           +F +  A+++  D+++   R   +   +  ++  V    +++            G+LD +
Sbjct: 24  LFAKEGARLVACDIEEGPLREAAEAVGAHPVVXDVADPASVERGFAEAL--AHLGRLDGV 81
Query: 61  FNNAGIIS-NMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTAN-LATE 104
            + AGI   N        D E V RV +   FL              G ++ TA+ +   
Sbjct: 82  VHYAGITRDNFHWKXPLEDWELVLRVNLTGSFLVAKAASEAXREKNPGSIVLTASRVYLG 141
Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +G+A  +Y  S   V+GL + L +ELG++ IRVN++A
Sbjct: 142 NLGQA--NYAASXAGVVGLTRTLALELGRWGIRVNTLA 177

>pdb|1NXQ|A Chain A, Crystal Structure Of R-Alcohol Dehydrogenase (Radh) (Apoenyzme) From Lactobacillus Brevis Length = 251

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 20/178 (11%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
           F++  AKV+I     D+     K   + + I +   + + +     +FD T+  FG +  
Sbjct: 26  FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85
Query: 60  MFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG----------- 107
           + NNAGI  N     T   +  K+  V +  VF G  L    +  + +G           
Sbjct: 86  LVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG 145
Query: 108 ----EALYDYLMSKYAVLGLMKNLCVE--LGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
                +L  Y  SK AV  + K+  ++  L  YD+RVN++      TP   +  G ++
Sbjct: 146 FVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE 203

>pdb|2WD7|A Chain A, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 81  FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 140
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 141 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 200
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 201 GVAPGVSLLPV---AMGEEEK 218

>pdb|1G6K|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant E96a Complexed With Nad+ Length = 261

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2   FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
           F   +AKV++    ++D   ++ +E      E I+ V  +VT++SDV N+      +FGK
Sbjct: 27  FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57  LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
           LD+M NNAG+ + +    +  +D  KV    +   FLG    +  F  N           
Sbjct: 86  LDVMINNAGLANPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             E I   L+  Y  SK  +  + + L +E     IRVN+I      TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194

>pdb|2WD7|B Chain B, Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Complex With Nadp And Ddd00066750 Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 81  FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 140
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 141 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 200
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 201 GVAPGVSLLPV---AMGEEEK 218

>pdb|3BMC|B Chain B, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238

>pdb|3JQ7|B Chain B, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238

>pdb|3BMC|A Chain A, Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Substrate (Folate) Length = 288

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238

>pdb|2C7V|A Chain A, Structure Of Trypanosoma Brucei Pteridine Reductase (Ptr1) In Ternary Complex With Cofactor And The Antifolate Methotrexate Length = 268

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 81  FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 140
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 141 RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 200
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 201 GVAPGVSLLPV---AMGEEEK 218

>pdb|3UCX|A Chain A, The Structure Of A Short Chain Dehydrogenase From Mycobacterium Smegmatis Length = 264

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 21/126 (16%)
Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
           V  ++T D+ V ++ D T   +G++D++ NNA  + +M +   +T  E ++  + + VF 
Sbjct: 65  VGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSM-KPFANTTFEHMRDAIELTVFG 123
Query: 93  GVLL---FTANLATETIG-------------EALYD-YLMSKYAVLGLMKNLCVELGQYD 135
            + L   FT  L  E+ G             +A Y  Y M+K A+L + + L  ELG+  
Sbjct: 124 ALRLIQGFTPAL-EESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKG 182
Query: 136 IRVNSI 141
           IRVNS+
Sbjct: 183 IRVNSV 188

>pdb|3JQ7|A Chain A, Crystal Structure Of Pteridine Reductase 1 (Ptr1) From Trypanosoma Brucei In Ternary Complex With Cofactor (Nadp+) And Inhibitor 6- Phenylpteridine-2,4,7-Triamine (Dx2) Length = 288

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 34/141 (24%)
Query: 51  FTKFGKLDIMFNNAGII-----------SNMDRTTLDTDNEKVKRVMIMVVFLGVLLF-- 97
           F  FG+ D++ NNA               N +  T++T   ++     +  FL  + F  
Sbjct: 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQ 160
Query: 98  ----------TANLATETIGEALYD--------YLMSKYAVLGLMKNLCVELGQYDIRVN 139
                     ++NL+   + +A+ D        Y M K+A++GL ++  +EL  Y IRVN
Sbjct: 161 RQKGTNPNCTSSNLSIVNLCDAMVDQPXMAFSLYNMGKHALVGLTQSAALELAPYGIRVN 220
Query: 140 SIAHIVSATPFFCNAMGIDKK 160
            +A  VS  P    AMG ++K
Sbjct: 221 GVAPGVSLLPV---AMGEEEK 238

>pdb|1GCO|A Chain A, Crystal Structure Of Glucose Dehydrogenase Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2   FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
           F   +AKV++    ++D   ++ +E      E I+ V  +VT++SDV N+      +FGK
Sbjct: 27  FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57  LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
           LD+M NNAG+ + +    +  +D  KV    +   FLG    +  F  N           
Sbjct: 86  LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             E I   L+  Y  SK  +  + + L +E     IRVN+I      TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194

>pdb|1GEE|A Chain A, Crystal Structure Of Glucose Dehydrogenase Mutant Q252l Complexed With Nad+ Length = 261

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 22/169 (13%)
Query: 2   FIQHRAKVIIA-DVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFD--FTKFGK 56
           F   +AKV++    ++D   ++ +E      E I+ V  +VT++SDV N+      +FGK
Sbjct: 27  FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85
Query: 57  LDIMFNNAGIISNMDRTTLD-TDNEKVKRVMIMVVFLG----VLLFTAN----------L 101
           LD+M NNAG+ + +    +  +D  KV    +   FLG    +  F  N           
Sbjct: 86  LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSS 145
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             E I   L+  Y  SK  +  + + L +E     IRVN+I      TP
Sbjct: 146 VHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTP 194

>pdb|2CFC|A Chain A, Structural Basis For Stereo Selectivity In The (R)- And (S)- Hydroxypropylethane Thiosulfonate Dehydrogenases Length = 250

Iteration: 1
 Score = 43.5 bits (101), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDN----EKVKRVMIM 88
           V  +V  + DV      T  +FG +D++ NNAGI  N +   L T      +KV  V + 
Sbjct: 57  VRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVR 116
Query: 89  VVFL--------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
            +FL              GV++  A++A+         Y  SK AVL L K++ V+    
Sbjct: 117 GIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGS 176
Query: 135 DIRVNSIAHIVSATPF 150
            IR N++   +  TP 
Sbjct: 177 GIRCNAVCPGMIETPM 192

>pdb|2ET6|A Chain A, (3r)-Hydroxyacyl-Coa Dehydrogenase Domain Of Candida Tropicalis Peroxisomal Multifunctional Enzyme Type 2 Length = 604

Iteration: 1
 Score = 42.7 bits (99), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 74/163 (45%), Gaps = 30/163 (18%)
Query: 2   FIQHRAKVIIADVQD-----DLCRALCKEFDSDELISYVCCNVTIDSD--VKNVFDFTKF 54
           F ++ AKV++ D +D     D  +A   E   D+       +V  DS+  +KNV D  K+
Sbjct: 342 FAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQH------DVAKDSEAIIKNVID--KY 393
Query: 55  GKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLGVLLFTANLATETIGEAL--- 110
           G +DI+ NNAGI+ +     +     + V++V ++  F    L       +  G  +   
Sbjct: 394 GTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINIT 453
Query: 111 -----------YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                       +Y  SK  +LGL K + +E  + +I+VN +A
Sbjct: 454 STSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496

>pdb|3O4R|A Chain A, Crystal Structure Of Human DehydrogenaseREDUCTASE (SDR FAMILY) MEMBER 4 (Dhrs4) Length = 261

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 30/130 (23%)
Query: 55  GKLDIMFNNAGI----ISNMDRT------TLDTDNEKVKRVMIMVVFL-------GVLLF 97
           G +DI+ +NA +     S MD T      TLD  N K   +M   V         G ++ 
Sbjct: 91  GGIDILVSNAAVNPFFGSIMDVTEEVWDKTLDI-NVKAPALMTKAVVPEMEKRGGGSVVI 149
Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI 157
            +++A  +       Y +SK A+LGL K L +EL   +IRVN            C A G+
Sbjct: 150 VSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVN------------CLAPGL 197
Query: 158 DKKTFKELLY 167
            K +F  +L+
Sbjct: 198 IKTSFSRMLW 207

>pdb|1XHL|A Chain A, Crystal Structure Of Putative Tropinone Reductase-Ii From Caenorhabditis Elegans With Cofactor And Substrate Length = 297

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 50/195 (25%), Positives = 87/195 (44%), Gaps = 33/195 (16%)
Query: 1   VFIQHRAKVIIADVQDDLC----RALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KF 54
           +F +  A+V I    +D      + + K     E I+ V  +VT  S   ++ + T  KF
Sbjct: 45  IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104
Query: 55  GKLDIMFNNAGIISNMDRTTLDTDN--------------------EKVKRVMIMVVFLGV 94
           GK+DI+ NNAG  +N+   T +TD                     +K K  +I     G 
Sbjct: 105 GKIDILVNNAG--ANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKT--KGE 160
Query: 95  LLFTANLATETIGEALYDYLM-SKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
           ++  +++       + Y Y   +K A+    +   ++L Q+ +RVNS++    AT F   
Sbjct: 161 IVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM-G 219
Query: 154 AMGIDKKTFKELLYA 168
           AMG+  +T  + LY+
Sbjct: 220 AMGL-PETASDKLYS 233

>pdb|3UWR|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Avium Strain 104 Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 21/108 (19%)
Query: 53  KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV------------------ 94
           + G+LDI+  NAG+    D   L    + V + MI +   GV                  
Sbjct: 101 QLGRLDIIVANAGV--GTDGRKLHKIRDNVWQDMIDINLTGVWHTVKAGVPHVLSGGRGG 158
Query: 95  -LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
            ++ T+++           Y+ +K+ V+GLM+   VELG + IRVN++
Sbjct: 159 SIVLTSSVGGRKAYPNTGHYIAAKHGVIGLMRAFAVELGPHMIRVNAV 206

>pdb|3OEC|A Chain A, Crystal Structure Of Carveol Dehydrogenase From Mycobacterium Thermoresistibile Length = 317

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 51  FTKFGKLDIMFNNAGIISNMDRTTLDTDNE-----------------KVKRVMIMVVFLG 93
             +FG +DI+ +N GI SN       TD +                  V   MI     G
Sbjct: 130 LAEFGHIDILVSNVGI-SNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGG 188
Query: 94  VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN 153
            ++F ++            Y  SK+ V GLM +L  E+G+++IRVNS+       P   N
Sbjct: 189 SVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSV------NPGAVN 242
Query: 154 A-MGIDKKTFKELL 166
             M +++K  K  L
Sbjct: 243 TEMALNEKLLKMFL 256

>pdb|3PGX|A Chain A, Crystal Structure Of A Putative Carveol Dehydrogenase From Mycobacterium Paratuberculosis Bound To Nicotinamide Adenine Dinucleotide Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 18/116 (15%)
Query: 53  KFGKLDIMFNNAGIISNMDRTTLDTDNE-----------------KVKRVMIMVVFLGVL 95
           +FG+LD++  NAG++S   R    TD +                      MI     G +
Sbjct: 102 QFGRLDVVVANAGVLS-WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSI 160
Query: 96  LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
           +  ++ A          Y  SK+ +  L   L +ELG+Y IRVNSI      TP  
Sbjct: 161 VVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMI 216

>pdb|1ZEM|A Chain A, Crystal Structure Of Nad+-Bound Xylitol Dehydrogenase Length = 262

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 21/133 (15%)
Query: 30  ELISYVCCNVTIDSDVKNVFD--FTKFGKLDIMFNNAGI---------ISNMDRTTLDTD 78
           E  SYVC +VT +  V    D     FGK+D +FNNAG            + D   + T 
Sbjct: 57  EARSYVC-DVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTI 115
Query: 79  N--------EKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE 130
           N        + V R MI   + G ++ TA++A       +  Y  SK A++ L +   ++
Sbjct: 116 NVTGAFHVLKAVSRQMITQNY-GRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALD 174
Query: 131 LGQYDIRVNSIAH 143
           L  Y+IRVN+I+ 
Sbjct: 175 LAPYNIRVNAISP 187

>pdb|4FC6|A Chain A, Studies On Dcr Shed New Light On Peroxisomal Beta-Oxidation: Crystal Structure Of The Ternary Complex Of Pdcr Length = 277

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 27/165 (16%)
Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVF------DFTKF 54
           +F++H    +IA     L R L             C  +++D                +F
Sbjct: 46  IFMRHGCHTVIAS--RSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103
Query: 55  GKLDIMFN--------NAGIIS-NMDRTTLDTDNE---KVKRVMIMVVFL---GVLL-FT 98
           G++DI+ N         AG +S N  +T +D D      V RV+    F    GV++  T
Sbjct: 104 GRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNIT 163
Query: 99  ANLATETIGEALYDYLMS-KYAVLGLMKNLCVELGQYDIRVNSIA 142
           A L     G+AL  +  S K AV  + ++L VE G  +IRVNS+A
Sbjct: 164 ATLGNR--GQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLA 206

>pdb|2ZAT|A Chain A, Crystal Structure Of A Mammalian Reductase Length = 260

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 12/58 (20%)
Query: 110 LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLY 167
           L  Y +SK A+LGL KNL VEL   +IRVN            C A G+ K  F ++L+
Sbjct: 161 LGPYNVSKTALLGLTKNLAVELAPRNIRVN------------CLAPGLIKTNFSQVLW 206

>pdb|1K2W|A Chain A, Crystal Structure Of Sorbitol Dehydrogenase From R. Sphaeroides Length = 256

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 30/168 (17%)
Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD------FTKF 54
            +++  A+V IAD+  +  RA   E      I    C + +D   +   D        ++
Sbjct: 24  AYVREGARVAIADINLEAARATAAE------IGPAACAIALDVTDQASIDRCVAELLDRW 77
Query: 55  GKLDIMFNNAGI-----ISNMDRTTLDT-----------DNEKVKRVMIMVVFLGVLLFT 98
           G +DI+ NNA +     I  + R + D              + V R MI     G ++  
Sbjct: 78  GSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINM 137
Query: 99  ANLATETIGEALYD-YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIV 145
           A+ A    GEAL   Y  +K AV+ L ++  + L ++ I VN+IA  V
Sbjct: 138 ASQAGRR-GEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGV 184

>pdb|3TSC|A Chain A, Crystal Structure Of Short Chain Dehydrogenase Map_2410 From Mycobacterium Paratuberculosis Bound To Nad Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 18/119 (15%)
Query: 54  FGKLDIMFNNAGIISN--------------MD---RTTLDTDNEKVKRVMIMVVFLGVLL 96
            G+LDI+  NAG+ +               MD     T +T      R+ I     G ++
Sbjct: 99  LGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRI-IEGGRGGSII 157
Query: 97  FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
             ++ A   +   +  Y  SK+AV GL +    ELG++ IRVNS+      TP     M
Sbjct: 158 LISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDM 216

>pdb|3AY7|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 G259a Mutant Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISY---VCCNVTIDSDVKNVFD--FTKFGK 56
           F Q  AKV+I +  ++   AL  + + +E       V  +VT + DV N+      +FG 
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 57  LDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG----VLLFTAN----------L 101
           LD+M NNAG+ + +    L  DN  KV    +   FLG    +  F  N           
Sbjct: 94  LDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSS 153
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             E I   L+  Y  SK  +  + + L +E     IRVN+I      TP
Sbjct: 154 VHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202

>pdb|3AUS|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 In Ligand-Free Form Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISY---VCCNVTIDSDVKNVFD--FTKFGK 56
           F Q  AKV+I +  ++   AL  + + +E       V  +VT + DV N+      +FG 
Sbjct: 35  FGQEEAKVVI-NYYNNEEEALDAKKEVEEAGGQAIIVQGDVTKEEDVVNLVQTAIKEFGT 93
Query: 57  LDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG----VLLFTAN----------L 101
           LD+M NNAG+ + +    L  DN  KV    +   FLG    +  F  N           
Sbjct: 94  LDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMSS 153
Query: 102 ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
             E I   L+  Y  SK  +  + + L +E     IRVN+I      TP
Sbjct: 154 VHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202

>pdb|3GAF|A Chain A, 2.2a Crystal Structure Of 7-Alpha-Hydroxysteroid Dehydrogenase From Brucella Melitensis Length = 256

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 17/158 (10%)
Query: 2   FIQHRAKVIIADVQDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFD--FTKFGKLD 58
           F +  A V++ D++ +   A+      +      + CNVT +   + V      +FGK+ 
Sbjct: 32  FAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKIT 91
Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLATE 104
           ++ NNAG           +D E   ++ +  +F               G +L  +++A E
Sbjct: 92  VLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE 151
Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                +  Y  SK AV  L +N+  ++G   IRVN+IA
Sbjct: 152 NTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIA 189

>pdb|3AY6|A Chain A, Crystal Structure Of Bacillus Megaterium Glucose Dehydrogenase 4 A258f Mutant In Complex With Nadh And D-Glucose Length = 269

Iteration: 1
 Score = 40.4 bits (93), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 70/170 (41%), Gaps = 24/170 (14%)
Query: 2   FIQHRAKVIIADVQDDL----CRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFG 55
           F Q  AKV+I    ++      +   +E     +I  V  +VT + DV N+      +FG
Sbjct: 35  FGQEEAKVVINYYNNEEEALDAKKEVEEAGGQAII--VQGDVTKEEDVVNLVQTAIKEFG 92
Query: 56  KLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLG----VLLFTAN---------- 100
            LD+M NNAG+ + +    L  DN  KV    +   FLG    +  F  N          
Sbjct: 93  TLDVMINNAGVENPVPSHELSLDNWNKVIDTNLTGAFLGSREAIKYFVENDIKGNVINMS 152
Query: 101 LATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
              E I   L+  Y  SK  +  + + L +E     IRVN+I      TP
Sbjct: 153 SVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTP 202

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	181
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	3e-49
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	5e-30
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	1e-24
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	2e-24
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	6e-24
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	6e-24
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	1e-23
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	3e-23
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	5e-23
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	5e-23
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	7e-23
4dqx_A	277	Probable oxidoreductase protein; structural genomi	5e-22
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	8e-21
4e4y_A	244	Short chain dehydrogenase family protein; structur	8e-21
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	1e-20
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	1e-20
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	3e-20
1spx_A	278	Short-chain reductase family member (5L265); paral	9e-20
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	1e-19
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	4e-19
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	6e-19
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	1e-18
1xhl_A	297	Short-chain dehydrogenase/reductase family member	1e-18
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	1e-18
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	2e-18
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	3e-18
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	4e-18
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	8e-18
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	9e-18
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	1e-17
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	1e-17
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	1e-17
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	2e-17
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	2e-17
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	2e-17
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	5e-17
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	6e-17
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	6e-17
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	6e-17
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	7e-17
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	7e-17
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	8e-17
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	9e-17
1xkq_A	280	Short-chain reductase family member (5D234); parra	9e-17
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	1e-16
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	2e-16
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	2e-16
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	2e-16
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	2e-16
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	3e-16
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	4e-16
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	6e-16
3imf_A	257	Short chain dehydrogenase; structural genomics, in	9e-16
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	1e-15
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	1e-15
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	3e-15
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	5e-15
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	6e-15
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	8e-15
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	9e-15
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	1e-14
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	1e-14
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	2e-14
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	2e-14
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	2e-14
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	2e-14
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	2e-14
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	2e-14
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	3e-14
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	3e-14
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	3e-14
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	4e-14
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	5e-14
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	7e-14
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	1e-13
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	2e-13
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	2e-13
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	2e-13
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	2e-13
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	2e-13
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	3e-13
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	3e-13
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	3e-13
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	4e-13
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	5e-13
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	6e-13
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	8e-13
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	1e-12
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	1e-12
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	1e-12
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	1e-12
3cxt_A	291	Dehydrogenase with different specificities; rossma	2e-12
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	2e-12
1xq1_A	266	Putative tropinone reducatse; structural genomics,	2e-12
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	2e-12
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	4e-12
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	4e-12
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	5e-12
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	1e-11
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	1e-11
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	2e-11
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	2e-11
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	2e-11
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	2e-11
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	3e-11
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	3e-11
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	3e-11
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	4e-11
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	7e-11
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	8e-11
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	1e-10
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	1e-10
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	1e-10
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	1e-10
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	2e-10
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	2e-10
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	2e-10
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	3e-10
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	4e-10
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	4e-10
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	5e-10
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	6e-10
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	7e-10
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	9e-10
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	1e-09
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	1e-09
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	1e-09
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	2e-09
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	2e-09
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	3e-09
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	4e-09
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	5e-09
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	8e-09
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	1e-08
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	1e-08
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	2e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	2e-08
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	3e-08
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	2e-08
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	3e-08
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	3e-08
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	4e-08
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	4e-08
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	6e-08
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	6e-08
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	6e-08
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	6e-08
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	7e-08
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	1e-07
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	2e-07
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	2e-07
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	3e-07
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	3e-07
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	1e-06
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	2e-06
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	3e-06
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	3e-06
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	3e-06
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	5e-06
3rih_A	293	Short chain dehydrogenase or reductase; structural	7e-06
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	1e-05
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	7e-05
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	7e-05
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	1e-04
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	2e-04
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	2e-04
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	2e-04
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	2e-04
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	3e-04
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	3e-04
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	4e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-04

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* Length = 278

 Score =  159 bits (405), Expect = 3e-49
 Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 20/200 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+++ AKV+IAD+ DD  + +C    S ++IS+V C+VT D DV+N+ D T  K GKLDI
Sbjct: 36  FVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 95

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLA 102
           MF N G++S    + L+  NE  KRVM I V   FL              G ++FTA+++
Sbjct: 96  MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASIS 155

Query: 103 TETIGEAL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           + T GE + + Y  +K+AVLGL  +LC ELG+Y IRVN ++  + A+P   +  G+D   
Sbjct: 156 SFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR 215

Query: 162 FKELLYASANLKGVVLKAAD 181
            +EL + +ANLKG +L+A D
Sbjct: 216 VEELAHQAANLKGTLLRAED 235

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* Length = 260

 Score =  109 bits (275), Expect = 5e-30
 Identities = 45/160 (28%), Positives = 73/160 (45%), Gaps = 23/160 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   AKV+  D+ D+  +A+  E        YV  +VT  +  K   D     FG L +
Sbjct: 27  MVAEGAKVVFGDILDEEGKAMAAELADA--ARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 84

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLA 102
           + NNAGI++    T  D    + +R++ + +  VFL              G ++  +++ 
Sbjct: 85  LVNNAGILN--IGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 142

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                 A + Y  +K+AV GL K+  +ELG   IRVNSI 
Sbjct: 143 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH 182

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 Length = 253

 Score = 95.2 bits (238), Expect = 1e-24
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 24/161 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   AKV  +D+ +   + L  E        +V  +V+ ++D   V      + G L++
Sbjct: 26  LLGEGAKVAFSDINEAAGQQLAAELGER--SMFVRHDVSSEADWTLVMAAVQRRLGTLNV 83

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL-------------GVLLFTANLAT 103
           + NNAGI+            E   R++ I    VF+             G ++  A++++
Sbjct: 84  LVNNAGILL--PGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS 141

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIA 142
               E    Y  SK AV  L +   +   +  Y IRVNSI 
Sbjct: 142 WLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIH 182

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* Length = 254

 Score = 94.9 bits (237), Expect = 2e-24
 Identities = 48/160 (30%), Positives = 75/160 (46%), Gaps = 23/160 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   A+V++ADV D+   A  +E        Y   +VTI+ D + V  +   +FG +D 
Sbjct: 25  AVAAGARVVLADVLDEEGAATARELGDA--ARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFLGV-----LLFTA------NLA--T 103
           + NNAGI +           E+ ++V+ I +  VF+G+      +  A      N++   
Sbjct: 83  LVNNAGIST--GMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAA 140

Query: 104 ETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             +G A    Y  SK+ V GL K   VELG   IRVNS+ 
Sbjct: 141 GLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH 180

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 Length = 270

 Score = 93.8 bits (234), Expect = 6e-24
 Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 22/159 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   A+V+I D  +   RAL +E        ++ C+VT + DVK +   T  +FG+LD 
Sbjct: 29  FVNSGARVVICDKDESGGRALEQELPG---AVFILCDVTQEDDVKTLVSETIRRFGRLDC 85

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL-------------GVLLFTANLAT 103
           + NNAG      +   +T  +  ++++ + +   +              G ++  ++L  
Sbjct: 86  VVNNAGH-HPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG 144

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                    Y+ +K AV  + K L ++   Y +RVN I+
Sbjct: 145 AIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS 183

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} Length = 271

 Score = 93.7 bits (234), Expect = 6e-24
 Identities = 29/160 (18%), Positives = 60/160 (37%), Gaps = 21/160 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
             +  A+V++AD+ +              +  +   ++T +  V+ + DFT   FG+LDI
Sbjct: 31  LARAGARVVLADLPETDLAGAAASVGRGAV--HHVVDLTNEVSVRALIDFTIDTFGRLDI 88

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLA 102
           + NNA      D        +       +      L              G ++  ++  
Sbjct: 89  VDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSAT 148

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                +    Y  +K A+  L + +  + G++ +R N+IA
Sbjct: 149 AHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIA 188

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A Length = 251

 Score = 92.6 bits (231), Expect = 1e-23
 Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 24/163 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F++  AKV+I     D+     K   + + I +   + + +     +FD T   FG +  
Sbjct: 26  FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFLG----VLLFTA--------NLA-- 102
           + NNAGI    +++  +T   + ++++ + +  VF G    +             N++  
Sbjct: 86  LVNNAGIAV--NKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143

Query: 103 TETIGEA-LYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIA 142
              +G+  L  Y  SK AV  + K+  ++     YD+RVN++ 
Sbjct: 144 EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVH 186

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 Length = 267

 Score = 91.8 bits (229), Expect = 3e-23
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 23/163 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT--KFGK 56
                AK+ + DV  +   A             +     +V+ ++ V+     T  +FG+
Sbjct: 33  LAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR 92

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTA 99
           +D  FNNAGI       T      +  +V+ I +  VFL              G+++ TA
Sbjct: 93  IDGFFNNAGI-EGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTA 151

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++           Y  +K+ V+GL +N  VE G+Y IR+N+IA
Sbjct: 152 SVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIA 194

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} Length = 280

 Score = 91.5 bits (228), Expect = 5e-23
 Identities = 39/157 (24%), Positives = 63/157 (40%), Gaps = 22/157 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           AKV++     +    L  E        + +  +V  ++  + + +    +FG LD  FNN
Sbjct: 33  AKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNN 92

Query: 64  AGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLATETI 106
           AG              E  +  +   +   FL              G L FT++    T 
Sbjct: 93  AGA-LGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTA 151

Query: 107 GEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           G A +  Y  SK  ++GL++ L VELG   IRVN++ 
Sbjct: 152 GFAGVAPYAASKAGLIGLVQALAVELGARGIRVNALL 188

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} Length = 277

 Score = 91.5 bits (228), Expect = 5e-23
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 23/160 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
                  V+ AD+  D   A   +            +V+ +  +  + D     FG +D 
Sbjct: 49  LADEGCHVLCADIDGDAADAAATKIGCGAA--ACRVDVSDEQQIIAMVDACVAAFGGVDK 106

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLA 102
           +  NAG++     + +DT  E   RV+ I +   +L              G ++  ++LA
Sbjct: 107 LVANAGVVH--LASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLA 164

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +        Y MSK  ++ L +    EL    IR N++ 
Sbjct: 165 GQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLL 204

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} Length = 261

 Score = 90.7 bits (226), Expect = 7e-23
 Identities = 47/191 (24%), Positives = 78/191 (40%), Gaps = 26/191 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  AKV+I D        +  E     L   V  +++ ++DV    +    KFGK+DI
Sbjct: 29  FAKGGAKVVIVDRDKAGAERVAGEIGDAAL--AVAADISKEADVDAAVEAALSKFGKVDI 86

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFLG------------------VLLFT 98
           + NNAG I +  +     + E+  R++ + V  V+L                   V+L  
Sbjct: 87  LVNNAG-IGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNV 145

Query: 99  ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID 158
           A+         L  Y  +K  V+ + K L +EL    IRV ++  +   TP     MG D
Sbjct: 146 ASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGED 205

Query: 159 KKTFKELLYAS 169
            +  ++    S
Sbjct: 206 SEEIRKKFRDS 216

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} Length = 277

 Score = 88.8 bits (221), Expect = 5e-22
 Identities = 38/160 (23%), Positives = 72/160 (45%), Gaps = 23/160 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F ++ A V++ADV +D    +  E  S      V  +V+   D +++ + T  K+G++D+
Sbjct: 47  FAKNGAYVVVADVNEDAAVRVANEIGSK--AFGVRVDVSSAKDAESMVEKTTAKWGRVDV 104

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLA 102
           + NNAG         +    E   R+M + V  +FL              G ++ T +  
Sbjct: 105 LVNNAGF--GTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYT 162

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             +       Y+ SK A+  L + + ++  +  IRVN++A
Sbjct: 163 ATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVA 202

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} Length = 250

 Score = 85.2 bits (212), Expect = 8e-21
 Identities = 41/163 (25%), Positives = 68/163 (41%), Gaps = 22/163 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDE--LISYVCCNVTIDSDVKNVFDFT--KFGKL 57
           F+    +V   D+  +      +         +  V  +V  + DV      T  +FG +
Sbjct: 22  FLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81

Query: 58  DIMFNNAGIISNMDRTTL-DTDNEKVKRVM-IMV--VFL--------------GVLLFTA 99
           D++ NNAGI  N +   L  T  E+  +VM + V  +FL              GV++  A
Sbjct: 82  DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIA 141

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++A+         Y  SK AVL L K++ V+     IR N++ 
Sbjct: 142 SVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVC 184

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} Length = 244

 Score = 84.9 bits (211), Expect = 8e-21
 Identities = 36/157 (22%), Positives = 66/157 (42%), Gaps = 27/157 (17%)

Query: 2   FIQHRAKVIIA-DVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIM 60
            +Q++   +I  D+Q            S E + ++  ++T   D+ NV D  K    D +
Sbjct: 24  LLQNKNHTVINIDIQQSF---------SAENLKFIKADLTKQQDITNVLDIIKNVSFDGI 74

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLFTA---------NLA--TETI 106
           F NAGI+     +  D D E +K+V+   +      +                      I
Sbjct: 75  FLNAGILI--KGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFI 132

Query: 107 GEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +   + Y +SK A+  + K+L ++L +Y IRVN++ 
Sbjct: 133 AKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVC 169

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* Length = 281

 Score = 85.4 bits (212), Expect = 1e-20
 Identities = 36/162 (22%), Positives = 63/162 (38%), Gaps = 24/162 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   A+V + D   +  R L      + +   V  +V    D K   +     FGK+D 
Sbjct: 25  FVAEGARVAVLDKSAERLRELEVAHGGNAV--GVVGDVRSLQDQKRAAERCLAAFGKIDT 82

Query: 60  MFNNAGII---SNMDRTTLDTDNEKVKRVM-IMV--VFL-------------GVLLFTAN 100
           +  NAGI    + +     D  +     +  + V                  G ++FT +
Sbjct: 83  LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTIS 142

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            A          Y  +K+AV+GL++ +  EL  + +RVN +A
Sbjct: 143 NAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRVNGVA 183

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} Length = 281

 Score = 84.9 bits (211), Expect = 1e-20
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 24/159 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL----ISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
           A V+I     D      +E ++       I Y   ++T + +     D      G+L  +
Sbjct: 36  ASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGV 95

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLAT 103
            + AG   N+       D+E  +R +   +                   G  +  +++A 
Sbjct: 96  VHCAGGSENIGP-ITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA 154

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                    Y ++K AV  LM+    ELG   +RVNSI 
Sbjct: 155 SNTHRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIR 193

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} Length = 254

 Score = 83.7 bits (208), Expect = 3e-20
 Identities = 34/187 (18%), Positives = 76/187 (40%), Gaps = 21/187 (11%)

Query: 7   AKVIIADVQDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           + V+  ++ +D    + +E     + +  V  +V+   DV+     T   + ++D++ NN
Sbjct: 32  SIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNN 91

Query: 64  AGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATETI 106
           AGI+  +     +  +E  +RV+   +   F               GV++ TA++A    
Sbjct: 92  AGIMDGVTPV-AEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG 150

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELL 166
           G A   Y ++K+ ++GL +++    G   IR  ++      T     +    +   + L 
Sbjct: 151 GFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLT 210

Query: 167 YASANLK 173
              +   
Sbjct: 211 KLMSLSS 217

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 278

 Score = 82.6 bits (205), Expect = 9e-20
 Identities = 48/192 (25%), Positives = 83/192 (43%), Gaps = 26/192 (13%)

Query: 7   AKVIIADVQDDLCRALCKEFDS----DELISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
           AKV I     +      ++  +    ++ ++ V  +VT D+    +   T  KFGKLDI+
Sbjct: 31  AKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDIL 90

Query: 61  FNNAGIISN--MDRTTLDTDNEKVKRVM-IMV--VFLGVLLFTANLA--------TETIG 107
            NNAG        +T      E     + + +  V         +L+          +I 
Sbjct: 91  VNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIA 150

Query: 108 EALY------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
             L+       Y ++K A+    +N  ++L Q+ IRVNSI+  + AT F  +AMG+ ++T
Sbjct: 151 SGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG-SAMGMPEET 209

Query: 162 FKELLYASANLK 173
            K+     A +K
Sbjct: 210 SKKFYSTMATMK 221

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} Length = 273

 Score = 82.2 bits (204), Expect = 1e-19
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 21/182 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
           F+   A+V I   + D+  A   E         +  +    +++  +++  K   G++D+
Sbjct: 49  FVAEGARVFITGRRKDVLDAAIAEIGGG--AVGIQADSANLAELDRLYEKVKAEAGRIDV 106

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL------------GVLLFTANLATE 104
           +F NAG  S       +   E+        V  V                ++ T + A  
Sbjct: 107 LFVNAGGGS--MLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS 164

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
           T   A   Y  SK A+    +N  ++L    IR+N+++   + T       G D    + 
Sbjct: 165 TGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQG 224

Query: 165 LL 166
           LL
Sbjct: 225 LL 226

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} Length = 269

 Score = 81.1 bits (201), Expect = 4e-19
 Identities = 35/160 (21%), Positives = 71/160 (44%), Gaps = 31/160 (19%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +++ AKV+   + +     +   F           +VT + +VK   + T  K+G++DI
Sbjct: 34  LVRYGAKVVSVSLDEKSDVNVSDHFK---------IDVTNEEEVKEAVEKTTKKYGRIDI 84

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLA 102
           + NNAGI          T  E  +R++ + V   +L              G ++  A++ 
Sbjct: 85  LVNNAGIEQ--YSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQ 142

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +    +    Y+ SK+A+LGL +++ ++     IR N++ 
Sbjct: 143 SYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAVC 181

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 Length = 262

 Score = 80.3 bits (199), Expect = 6e-19
 Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 21/156 (13%)

Query: 7   AKVIIADVQDDLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
             + + D+  +          +         C+VT +  V    D     FGK+D +FNN
Sbjct: 32  TAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNN 91

Query: 64  AGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLATETI 106
           AG          D  ++   RV+ I V   F               G ++ TA++A    
Sbjct: 92  AGYQGAFAP-VQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKG 150

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              +  Y  SK A++ L +   ++L  Y+IRVN+I+
Sbjct: 151 PPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAIS 186

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* Length = 260

 Score = 79.8 bits (198), Expect = 1e-18
 Identities = 39/162 (24%), Positives = 65/162 (40%), Gaps = 23/162 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             Q  A V+++  + +           + L ++   C+V    D + +        G +D
Sbjct: 34  LAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVD 93

Query: 59  IMFNNAGIISNMDR-TTLDTDNE---KVKRVMIMVVFL--------------GVLLFTAN 100
           I+ +NA +  N      +D   E   K+  V +    L              G +L  ++
Sbjct: 94  ILVSNAAV--NPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSS 151

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +        L  Y +SK A+LGL KNL VEL   +IRVN +A
Sbjct: 152 VGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLA 193

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 297

 Score = 80.0 bits (198), Expect = 1e-18
 Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 24/195 (12%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFD----SDELISYVCCNVTIDSDVKNVFDFT--KFG 55
           F +  A+V I    +D      ++        E I+ V  +VT  S   ++ + T  KFG
Sbjct: 46  FAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG 105

Query: 56  KLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFLGVLLFTA----------NLA 102
           K+DI+ NNAG          D   E  ++   +    V                   N++
Sbjct: 106 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVS 165

Query: 103 TETIGEA----LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID 158
           +   G         Y  +K A+    +   ++L Q+ +RVNS++    AT F   AMG+ 
Sbjct: 166 SIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM-GAMGLP 224

Query: 159 KKTFKELLYASANLK 173
           +    +L     + K
Sbjct: 225 ETASDKLYSFIGSRK 239

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 Length = 246

 Score = 79.1 bits (196), Expect = 1e-18
 Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 26/159 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
           F +  AKVI  D+ +   + L K       I     +VT    +    +  +  +LD++F
Sbjct: 26  FAREGAKVIATDINESKLQELEKYPG----IQTRVLDVTKKKQIDQFAN--EVERLDVLF 79

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATE 104
           N AG +     T LD + +     M   +  ++L              G ++  +++A+ 
Sbjct: 80  NVAGFVH--HGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS 137

Query: 105 TIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             G      Y  +K AV+GL K++  +  Q  IR N + 
Sbjct: 138 VKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVC 176

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} PDB: 3uwr_A* Length = 286

 Score = 79.2 bits (196), Expect = 2e-18
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 38/173 (21%)

Query: 7   AKVIIADVQDDLCRALCKEF----DSDEL-------------ISYVCCNVTIDSDVKNVF 49
           A +I  D+   +   +          ++L             I     +V     +K   
Sbjct: 36  ADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAV 95

Query: 50  DFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL------------ 92
           D    + G+LDI+  NAG I N   T   T  E    ++ I +  V+             
Sbjct: 96  DSGVEQLGRLDIIVANAG-IGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAG 154

Query: 93  ---GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              G ++ T+++           Y+ +K+ V+GLM+   VELGQ+ IRVNS+ 
Sbjct: 155 GRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVH 207

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} Length = 281

 Score = 78.9 bits (195), Expect = 3e-18
 Identities = 36/171 (21%), Positives = 58/171 (33%), Gaps = 34/171 (19%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
                  V+IAD+  +  +AL  E  +     +V  NVT +  V    +           
Sbjct: 50  LHADGLGVVIADLAAEKGKALADELGNR--AEFVSTNVTSEDSVLAAIEAANQLGRLRYA 107

Query: 60  MFNNAGI-----ISNMDRTTLDTDN-EKVKRVMIMVVFL--------------------G 93
           +  + G      I   D +  D     K   + +   +                     G
Sbjct: 108 VVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERG 167

Query: 94  VLLFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            L+ TA++A     IG+    Y  +K  V+GL      +L    IRVN+IA
Sbjct: 168 ALVLTASIAGYEGQIGQT--AYAAAKAGVIGLTIAAARDLSSAGIRVNTIA 216

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A Length = 264

 Score = 78.0 bits (193), Expect = 4e-18
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 32/160 (20%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   +KVI   + D            +    ++ C+VT    VK   D    ++G + +
Sbjct: 28  FVDEGSKVIDLSIHDP----------GEAKYDHIECDVTNPDQVKASIDHIFKEYGSISV 77

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFLG----VLLFTA-------NLA--T 103
           + NNAGI              + +R++ + +   +      +            N++   
Sbjct: 78  LVNNAGI--ESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQ 135

Query: 104 ETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +I       Y+ SK+AV+GL K++ ++     +R N++ 
Sbjct: 136 ASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVC 174

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 Length = 244

 Score = 76.8 bits (190), Expect = 8e-18
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 25/154 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI 66
           AKV+     +    +L KE      I  VC ++      +        G +D++ NNA +
Sbjct: 32  AKVVAVTRTNSDLVSLAKECPG---IEPVCVDLGDWDATEKALG--GIGPVDLLVNNAAL 86

Query: 67  ISNMDRTTLDTDNEKVKRVM---IMVVFL---------------GVLLFTANLATETIGE 108
              + +  L+   E   R     +  VF                G ++  +++       
Sbjct: 87  --VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFP 144

Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            L  Y  +K A+  L K + +ELG + IRVNS+ 
Sbjct: 145 NLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVN 178

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 Length = 273

 Score = 77.2 bits (191), Expect = 9e-18
 Identities = 30/157 (19%), Positives = 62/157 (39%), Gaps = 23/157 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTK---FGKLDIMFN 62
           A+V      +       + +    L +    C++   ++   +         GKL+I+ N
Sbjct: 46  ARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVN 105

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATET 105
           NAG+   + +   D   +    +M       +               G ++F +++A  +
Sbjct: 106 NAGV--VIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFS 163

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              ++  Y  SK A+  + K+L  E  + +IRVNS+A
Sbjct: 164 ALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVA 200

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} Length = 283

 Score = 77.2 bits (191), Expect = 1e-17
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 27/160 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
             V            +  E      + I  +  +V+ +  ++N       KFG LDI+  
Sbjct: 53  VTVGALGRTRTEVEEVADEIVGAGGQAI-ALEADVSDELQMRNAVRDLVLKFGHLDIVVA 111

Query: 63  NAGIISNMDRTTLDTDNEKVKRVMIMV----VFL--------------GVLLFTA-NLAT 103
           NAGI         D    +    +  V     FL              G ++  +    T
Sbjct: 112 NAGINGVWAPI-DDLKPFEWDETI-AVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGT 169

Query: 104 ETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            T        Y  +K A + +++ L +ELG++ IRVN++ 
Sbjct: 170 RTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVC 209

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} Length = 251

 Score = 76.6 bits (189), Expect = 1e-17
 Identities = 29/174 (16%), Positives = 52/174 (29%), Gaps = 31/174 (17%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F       I  D +++                      + + ++K+V +    K  K+D 
Sbjct: 42  FKSKSWNTISIDFRENPNADHS-----------FTIKDSGEEEIKSVIEKINSKSIKVDT 90

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL------------GVLLFTANLATE 104
               AG  S     + D   + VK ++   +   F             G+ + T   A  
Sbjct: 91  FVCAAGGWS-GGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAAL 149

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIAHIVSATPFFCNAMG 156
                +  Y  +K A   ++K+L  E G          I  +   TP     M 
Sbjct: 150 NRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMS 203

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} Length = 264

 Score = 76.8 bits (190), Expect = 1e-17
 Identities = 33/156 (21%), Positives = 68/156 (43%), Gaps = 22/156 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
           A +++A    +    + K+        +S V  ++T D+ V ++ D T   +G++D++ N
Sbjct: 36  ADLVLAARTVERLEDVAKQVTDTGRRALS-VGTDITDDAQVAHLVDETMKAYGRVDVVIN 94

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL-------------GVLLFTANLATETI 106
           NA  + +  +   +T  E ++  + + V                  G ++   ++     
Sbjct: 95  NAFRVPS-MKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHS 153

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                 Y M+K A+L + + L  ELG+  IRVNS+ 
Sbjct: 154 QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVL 189

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* Length = 255

 Score = 76.4 bits (189), Expect = 2e-17
 Identities = 41/162 (25%), Positives = 68/162 (41%), Gaps = 25/162 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
           F    A V+++D+  D    +  E      +  +  C ++T + ++  + DF   K GK+
Sbjct: 31  FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRC-DITSEQELSALADFAISKLGKV 89

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTAN 100
           DI+ NNAG          D      +R     +   F               GV+L   +
Sbjct: 90  DILVNNAGGG---GPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITS 146

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +A E     +  Y  SK A   L++N+  +LG+ +IRVN IA
Sbjct: 147 MAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIA 188

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} Length = 287

 Score = 76.9 bits (190), Expect = 2e-17
 Identities = 31/174 (17%), Positives = 45/174 (25%), Gaps = 39/174 (22%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-------------ISYVCCNVTIDSDVKNVFDFT- 52
           A +I+ D+  D+         S +L                   +V   + V        
Sbjct: 35  ADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAV 94

Query: 53  -KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV----------------- 94
            +FGKLD++  NAGI        +         V  + V   V                 
Sbjct: 95  AEFGKLDVVVANAGICPLGAHLPVQ-AFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153

Query: 95  ------LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                        A    G     Y  +K  V      L  +L    IR N I 
Sbjct: 154 SVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIH 207

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A Length = 259

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 24/161 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           +++  A V IAD+  +  R    E         V  +VT    +      T    G LDI
Sbjct: 28  YVREGATVAIADIDIERARQAAAEIGPAAY--AVQMDVTRQDSIDAAIAATVEHAGGLDI 85

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL---------------GVLLFTANL 101
           + NNA +        ++   E  +++  I V                    G ++  A+ 
Sbjct: 86  LVNNAALFD--LAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQ 143

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           A       +  Y  +K AV+ L ++  ++L ++ I VN+IA
Sbjct: 144 AGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIA 184

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* Length = 244

 Score = 74.8 bits (185), Expect = 5e-17
 Identities = 29/154 (18%), Positives = 57/154 (37%), Gaps = 25/154 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI 66
           A+V+          +L +E      I  VC ++      +        G +D++ NNA +
Sbjct: 32  ARVVAVSRTQADLDSLVRECPG---IEPVCVDLGDWEATERALG--SVGPVDLLVNNAAV 86

Query: 67  ISNMDRTTLDTDNEKVKRVM---IMVVFL---------------GVLLFTANLATETIGE 108
              + +  L+   E   R     +  V                 G ++  ++  ++    
Sbjct: 87  --ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVT 144

Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               Y  +K A+  L K + +ELG + IRVN++ 
Sbjct: 145 NHSVYCSTKGALDMLTKVMALELGPHKIRVNAVN 178

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} Length = 257

 Score = 75.0 bits (185), Expect = 6e-17
 Identities = 39/177 (22%), Positives = 63/177 (35%), Gaps = 33/177 (18%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
             Q  A V+  D++         E  +   + +   +VT ++D      F   +FG +  
Sbjct: 27  LAQEGATVLGLDLKPPAGEEPAAELGAA--VRFRNADVTNEADATAALAFAKQEFGHVHG 84

Query: 60  MFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------------GV 94
           + N AG      I             +   V ++  F                     GV
Sbjct: 85  LVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGV 144

Query: 95  LLFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           ++ TA++A     IG+A   Y  SK  V  L      EL ++ IRV +IA  +  TP
Sbjct: 145 IVNTASIAAFDGQIGQA--AYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTP 199

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} Length = 301

 Score = 75.5 bits (186), Expect = 6e-17
 Identities = 32/164 (19%), Positives = 62/164 (37%), Gaps = 27/164 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           F +  A+++++DV                     V C+V    ++  + D      G +D
Sbjct: 51  FARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLF---------------TAN 100
           ++F+NAGI+  +       +++  + V+   +      V  F               TA+
Sbjct: 111 VVFSNAGIV--VAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTAS 168

Query: 101 LA--TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            A      G   Y   ++KY V+GL + L  E+    I V+ + 
Sbjct: 169 FAGLVPNAGLGTYG--VAKYGVVGLAETLAREVKPNGIGVSVLC 210

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} Length = 277

 Score = 74.9 bits (185), Expect = 6e-17
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 36/170 (21%)

Query: 7   AKVIIADVQDDLCRA----LCKEFDSDEL----------ISYVCCNVTIDSDVKNVFDFT 52
           A +I  D+   L            D  E           I     +      ++ V D  
Sbjct: 36  ADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDG 95

Query: 53  --KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------- 92
               G+LDI+  NAG+ +   +   D   E  + VM I V   +                
Sbjct: 96  VAALGRLDIIVANAGVAA--PQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRG 153

Query: 93  GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           G ++  ++ A   +   +  Y  SK+AV GL +    ELG++ IRVNS+ 
Sbjct: 154 GSIILISSAAGMKMQPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVH 203

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* Length = 265

 Score = 75.0 bits (185), Expect = 7e-17
 Identities = 38/172 (22%), Positives = 71/172 (41%), Gaps = 35/172 (20%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   A  ++ D+ +    A  K+  ++    +   +VT + DV+        KFG++D+
Sbjct: 32  LVGQGASAVLLDLPNSGGEAQAKKLGNN--CVFAPADVTSEKDVQTALALAKGKFGRVDV 89

Query: 60  MFNNAGI------ISNMDRTTLDTDN-EKVKRVMIMVVFL-------------------- 92
             N AGI       +     T   ++ ++V  V +M  F                     
Sbjct: 90  AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQR 149

Query: 93  GVLLFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           GV++ TA++A     +G+A   Y  SK  ++G+   +  +L    IRV +IA
Sbjct: 150 GVIINTASVAAFEGQVGQA--AYSASKGGIVGMTLPIARDLAPIGIRVMTIA 199

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 Length = 267

 Score = 75.0 bits (185), Expect = 7e-17
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 31/165 (18%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT--KFGK 56
            +   AKV + D   +                   ++ C+V     +++ F      FG+
Sbjct: 27  LLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALY----- 111
           LDI+ NNAG+         + + EK  ++ ++ V  G  L    ++ +  GE        
Sbjct: 87  LDILVNNAGV-------NNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMS 139

Query: 112 ------------DYLMSKYAVLGLMKN--LCVELGQYDIRVNSIA 142
                        Y  SK+ ++G  ++  L   L    +R+N+I 
Sbjct: 140 SLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAIC 184

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} Length = 260

 Score = 74.5 bits (184), Expect = 8e-17
 Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 23/158 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A+VIIAD+ + +     ++   +   +S V  +VT    V+N       + G++DI+   
Sbjct: 38  ARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVAC 97

Query: 64  AGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATE-- 104
           AGI  + +    D  + +  + +   +  +F               GV++   +++    
Sbjct: 98  AGICIS-EVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIV 156

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              +    Y  SK  V   +++L  E   + IR N++A
Sbjct: 157 NRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVA 194

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* Length = 254

 Score = 74.5 bits (184), Expect = 9e-17
 Identities = 32/156 (20%), Positives = 60/156 (38%), Gaps = 23/156 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD-FTKFGKLDIMFNNAG 65
           A++I+ D +        +E  +      V  +VT    +            + I+ N+AG
Sbjct: 36  ARLILIDREAAALDRAAQELGAAVAARIVA-DVTDAEAMTAAAAEAEAVAPVSILVNSAG 94

Query: 66  IISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATET--I 106
           I    D   L+TD+   ++VM   +  +F               G ++   +++      
Sbjct: 95  IARLHD--ALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR 152

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +    Y+ SK AV  L + L  E     +RVN++A
Sbjct: 153 PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALA 188

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 280

 Score = 74.5 bits (184), Expect = 9e-17
 Identities = 41/198 (20%), Positives = 80/198 (40%), Gaps = 28/198 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFD----SDELISYVCCNVTIDSDVKNVFDFT--KFG 55
           F Q  A V I     +      +       S++ ++ V  +VT +     + + T  +FG
Sbjct: 26  FAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG 85

Query: 56  KLDIMFNNAGIISN--MDRTTLDTDNEKVKRVMIMVVFLGVLLFTA-------------- 99
           K+D++ NNAG         T  D   +   + +  +    V+  T               
Sbjct: 86  KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTL-KLNLQAVIEMTKKVKPHLVASKGEIV 144

Query: 100 NLATETIGEA----LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
           N+++   G         Y ++K A+    ++  ++L ++ IRVNS++  +  T F  NAM
Sbjct: 145 NVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT-NAM 203

Query: 156 GIDKKTFKELLYASANLK 173
           G+  +  ++     A+ K
Sbjct: 204 GMPDQASQKFYNFMASHK 221

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} Length = 272

 Score = 74.6 bits (184), Expect = 1e-16
 Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 24/157 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
             V +A  + D  +    E   D L   V  +VT    V+ +F  T  KFG++D++FNNA
Sbjct: 53  YGVALAGRRLDALQETAAEIGDDAL--CVPTDVTDPDSVRALFTATVEKFGRVDVLFNNA 110

Query: 65  GIISNMDRTTLDTDNEKVKRVM---IMVVFL----------------GVLLFTANLATET 105
           G  +       D    + K+V+   +   FL                G ++   +++  +
Sbjct: 111 GTGAPA-IPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS 169

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                  Y  +K+A+ GL K+  ++   +DI    I 
Sbjct: 170 PRPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQID 206

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} Length = 266

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 24/158 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDE--LISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
           A+++++        A  +         +  V  ++        +       FG LD++ N
Sbjct: 45  ARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVN 104

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM---IMVVFL---------------GVLLFTANLATE 104
           NAGI  +  +  +DTD +     +   +    L               G ++  A+ A  
Sbjct: 105 NAGI--SHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAAL 162

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                 Y Y  SK  ++   K L  ELG + IR NS+ 
Sbjct: 163 APLPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVC 200

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} Length = 276

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 42/159 (26%), Positives = 68/159 (42%), Gaps = 25/159 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
           A+V +A    D  + +  E      + +   C +VT    V+ + D    + G +DI   
Sbjct: 57  AQVAVAARHSDALQVVADEIAGVGGKALPIRC-DVTQPDQVRGMLDQMTGELGGIDIAVC 115

Query: 63  NAGIISNMD---------RTTLDTDNEK--------VKRVMIMVVFLGVLLFTANLATET 105
           NAGI+S            +   DT N            R M+     G ++ TA+++   
Sbjct: 116 NAGIVSVQAMLDMPLEEFQRIQDT-NVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHI 174

Query: 106 --IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             I + +  Y  SK AV+ L K + VEL  + IRVNS++
Sbjct: 175 INIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVS 213

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 Length = 256

 Score = 73.3 bits (181), Expect = 2e-16
 Identities = 27/161 (16%), Positives = 63/161 (39%), Gaps = 28/161 (17%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A V + D++ +  + + +        ++   ++  + +     +      G++D+
Sbjct: 26  FAREGALVALCDLRPEG-KEVAEAIGG----AFFQVDLEDERERVRFVEEAAYALGRVDV 80

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMV----VFL--------------GVLLFTANL 101
           + NNA I      + L     + +RV + V                     G ++  A++
Sbjct: 81  LVNNAAI--AAPGSALTVRLPEWRRV-LEVNLTAPMHLSALAAREMRKVGGGAIVNVASV 137

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                 +    Y  SK  ++ L ++L ++L    IRVN++A
Sbjct: 138 QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVA 178

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} Length = 299

 Score = 73.8 bits (182), Expect = 2e-16
 Identities = 35/169 (20%), Positives = 67/169 (39%), Gaps = 34/169 (20%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-------------ISYVCCNVTIDSDVKNVFDFT- 52
           A +I  DV   L          D+L             I     +V     ++   D   
Sbjct: 53  ADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGV 112

Query: 53  -KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL---------------G 93
            + G+LDI+  NA + S         D +  + ++ + +   ++               G
Sbjct: 113 TQLGRLDIVLANAALAS-EGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGG 171

Query: 94  VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            ++FT+++      E + +Y+ SK+ + GLM+ + +ELG  +IRVN + 
Sbjct: 172 SIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVC 220

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* Length = 260

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 29/157 (18%), Positives = 57/157 (36%), Gaps = 23/157 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTK---FGKLDIMFN 62
           A V               ++ S    +    C+++  S+ + + +       GKL+I+ N
Sbjct: 34  ASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVN 93

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATET 105
           NAGI   + +   D   E    +M       +               G ++F ++++   
Sbjct: 94  NAGI--VIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGAL 151

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                  Y  +K A+  L + L  E  + +IRVN + 
Sbjct: 152 AVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVG 188

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} Length = 278

 Score = 73.0 bits (180), Expect = 4e-16
 Identities = 33/168 (19%), Positives = 56/168 (33%), Gaps = 33/168 (19%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-------------ISYVCCNVTIDSDVKNVFDFT- 52
           A +I  D+ D +          +EL             I     +V     +        
Sbjct: 38  ADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGL 97

Query: 53  -KFGKLDIMFNNAGIIS-NMD----RTTLDTDNEK--------VKRVMIMVVFLGVLLFT 98
            + G+LDI+  NAGI   +         +D  N              ++     G ++  
Sbjct: 98  DELGRLDIVVANAGIAPMSAGDDGWHDVIDV-NLTGVYHTIKVAIPTLVKQGTGGSIVLI 156

Query: 99  ANLA----TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++ A      +       Y+ +K+ V+GLM+     L    IRVNSI 
Sbjct: 157 SSSAGLAGVGSADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIH 204

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} Length = 255

 Score = 72.1 bits (178), Expect = 6e-16
 Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 23/157 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A+VI+ D++  L                 V  +VT +  ++  F     +   +DI+ NN
Sbjct: 34  ARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINN 93

Query: 64  AGIISNMDRTTLDTDNEKVKRVM---IMVVFL---------------GVLLFTANLATET 105
           AGI     +  ++ + E  ++V+   +   FL               G ++   +L ++ 
Sbjct: 94  AGIQ--YRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQA 151

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               +  Y  +K  +  L  ++  E  Q++I+ N+I 
Sbjct: 152 ARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIG 188

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} Length = 257

 Score = 71.8 bits (177), Expect = 9e-16
 Identities = 39/164 (23%), Positives = 59/164 (35%), Gaps = 26/164 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           F +  A+V+I     +       E +     I  V  +V    D++ + +    KFG++D
Sbjct: 26  FAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA----------------NLA 102
           I+ NNA    N      D        V I +V  G    +                 N+ 
Sbjct: 86  ILINNAAG--NFICPAEDLSVNGWNSV-INIVLNGTFYCSQAIGKYWIEKGIKGNIINMV 142

Query: 103 T--ETIGEALY-DYLMSKYAVLGLMKNLCVELG-QYDIRVNSIA 142
                           +K  VL + K L VE G +Y IRVN+IA
Sbjct: 143 ATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIA 186

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} Length = 279

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 29/159 (18%), Positives = 57/159 (35%), Gaps = 25/159 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
           A V I                +      +Y C N++    V+         FG +D+   
Sbjct: 59  ADVAIWYNSHPADEKAEHLQKTYGVHSKAYKC-NISDPKSVEETISQQEKDFGTIDVFVA 117

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATE- 104
           NAG+           + +   +++   +  V+               G L+ T++++ + 
Sbjct: 118 NAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI 177

Query: 105 -TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             I +    Y  +K A   L K+L +E   +  RVN+I+
Sbjct: 178 VNIPQLQAPYNTAKAACTHLAKSLAIEWAPF-ARVNTIS 215

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} Length = 280

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 36/170 (21%)

Query: 7   AKVIIADVQDDLCRA----LCKEFDSDEL----------ISYVCCNVTIDSDVKNVFDFT 52
           A +I  D+   +  +         D DE                 +V  D+ ++ +    
Sbjct: 40  ADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADG 99

Query: 53  --KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------- 92
             +FG+LD++  NAG++S       +  +E+   V+ + +   +                
Sbjct: 100 MEQFGRLDVVVANAGVLS--WGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNG 157

Query: 93  GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           G ++  ++ A          Y  SK+ +  L   L +ELG+Y IRVNSI 
Sbjct: 158 GSIVVVSSSAGLKATPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIH 207

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} Length = 252

 Score = 70.4 bits (173), Expect = 3e-15
 Identities = 26/164 (15%), Positives = 55/164 (33%), Gaps = 24/164 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT-KFGKLDI 59
           F      V       +    L  E ++    I     +   + +V    +       L++
Sbjct: 27  FAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEV 86

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLA 102
              N G   N++   L+T +   ++V        F+              G + FT   A
Sbjct: 87  TIFNVGA--NVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATA 144

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS 146
           +   G     +  +K+ +  + +++  EL   +I V   AH++ 
Sbjct: 145 SLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHV---AHLII 185

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* Length = 302

 Score = 69.9 bits (172), Expect = 5e-15
 Identities = 32/164 (19%), Positives = 54/164 (32%), Gaps = 26/164 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDE--LISYVCCNVTIDSDVKNVFDFT--KFGKL 57
                A+ +IA  + D+ +A  ++  S     +  + C+V     V+N         G  
Sbjct: 46  LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP 105

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYD----- 112
           +I+ NNA    N    T        K +   +V  G    T  +  + I           
Sbjct: 106 NIVINNAAG--NFISPTERLSPNAWKTI-TDIVLNGTAFVTLEIGKQLIKAQKGAAFLSI 162

Query: 113 --------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                            +K  V  + K+L  E G+Y +R N I 
Sbjct: 163 TTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQ 206

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} Length = 257

 Score = 69.6 bits (171), Expect = 6e-15
 Identities = 38/180 (21%), Positives = 70/180 (38%), Gaps = 41/180 (22%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIM 60
            +   A+V++ D++ +    +  +        +   +VT ++ V +  D     G L I+
Sbjct: 29  LLDAGAQVVVLDIRGE---DVVADLGDR--ARFAAADVTDEAAVASALDLAETMGTLRIV 83

Query: 61  FNNAGIISNMDRTTLDTDN-------EKVKRVMIMVVFL--------------------- 92
            N AG  +      L  D         K+  + ++  F                      
Sbjct: 84  VNCAGTGN--AIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEE 141

Query: 93  -GVLLFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
            GV++ TA++A     IG+A   Y  SK  V+G+   +  +L  + IRV +IA  +  TP
Sbjct: 142 RGVIINTASVAAFDGQIGQA--AYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTP 199

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} Length = 281

 Score = 69.2 bits (170), Expect = 8e-15
 Identities = 31/159 (19%), Positives = 60/159 (37%), Gaps = 24/159 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
             V+I   + D+  A   E       ++  V C+V     V  +F     +F +LD++ N
Sbjct: 58  YSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVN 117

Query: 63  NAGI---ISNMDRTTLDTDNEKVKRVMIMVVFL----------------GVLLFTANLAT 103
           NAG       ++  T +     +    +   FL                G ++   +++ 
Sbjct: 118 NAGSNVPPVPLEEVTFE-QWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA 176

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +T       Y  +K+A+ GL K+  ++   +DI    I 
Sbjct: 177 QTPRPNSAPYTATKHAITGLTKSTALDGRMHDIACGQID 215

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A Length = 255

 Score = 68.7 bits (169), Expect = 9e-15
 Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 21/158 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGKLDI 59
            ++  A+V++    +     + +EF     +  +  ++   +++  +        G +D+
Sbjct: 28  LVEGGAEVLLTGRNESNIARIREEFGPR--VHALRSDIADLNEIAVLGAAAGQTLGAIDL 85

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFLGV------------LLFTANLATE 104
           +  NAG+                 R   +     F  V            ++FT+++A E
Sbjct: 86  LHINAGVSE--LEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE 143

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                +  Y  SK A++     L  EL    IRVNS++
Sbjct: 144 GGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVS 181

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* Length = 263

 Score = 68.7 bits (169), Expect = 1e-14
 Identities = 31/157 (19%), Positives = 57/157 (36%), Gaps = 23/157 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
           A +++   Q D      +         +  V  +V     V  V +     FG  DI+ N
Sbjct: 32  AHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVN 91

Query: 63  NAGIISNMDRTTLDTDNE---KVKRVMIMVVFL--------------GVLLFTANLATET 105
           NAG     + T ++  +E       +++M                  G ++  A++    
Sbjct: 92  NAGT--GSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQ 149

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                  Y ++K A++   K L  E+ + +IRVN I 
Sbjct: 150 PLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCIN 186

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* Length = 277

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDE--LISYVCCNVTIDSDVKNVFDFT--KFGKL 57
           F++H    +IA           ++           +  +V     V    D    +FG++
Sbjct: 47  FMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRI 106

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT---------------ANLA 102
           DI+ N A    N             K V + +   G    +                N+ 
Sbjct: 107 DILINCAAG--NFLCPAGALSFNAFKTV-MDIDTSGTFNVSRVLYEKFFRDHGGVIVNIT 163

Query: 103 TETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             T+G            +K AV  + ++L VE G  +IRVNS+A
Sbjct: 164 A-TLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLA 206

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} Length = 235

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 25/178 (14%), Positives = 61/178 (34%), Gaps = 30/178 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
            +V +   +    +       +  +   +  ++    DV   F       G  +++ + A
Sbjct: 28  HQVSMMGRRYQRLQQQELLLGNAVI--GIVADLAHHEDVDVAFAAAVEWGGLPELVLHCA 85

Query: 65  GIISNMDRTTL-DTDNEKVKRVMIMVVFLGVLLFTA--------------NLA-----TE 104
           G     +   +     E+++R ++    +  +L                 N+        
Sbjct: 86  GT---GEFGPVGVYTAEQIRR-VMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVG 141

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTF 162
              E+LY    SK+ + G +++L  EL    +R+ ++      + F+ N   +D   F
Sbjct: 142 KANESLYC--ASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDHVDPSGF 197

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} Length = 234

 Score = 67.9 bits (167), Expect = 2e-14
 Identities = 28/164 (17%), Positives = 58/164 (35%), Gaps = 32/164 (19%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
                 +V +    +   +AL  E +       +  +V  + D           FG+L  
Sbjct: 25  LHAKGYRVGLMARDEKRLQALAAELEG---ALPLPGDVREEGDWARAVAAMEEAFGELSA 81

Query: 60  MFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLA 102
           + NNAG+  +  +   TL+ +       ++     G  L                  N+ 
Sbjct: 82  LVNNAGVGVMKPVHELTLE-EWRL----VLDTNLTGAFLGIRHAVPALLRRGGGTIVNVG 136

Query: 103 TETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +   G+  +     Y  SK+ +LGL     ++L + ++RV ++ 
Sbjct: 137 S-LAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVL 179

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 242

 Score = 68.0 bits (167), Expect = 2e-14
 Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 41/176 (23%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK-FGKLDIM 60
                 +V++ D++ +    +           YV  +VT + DV+      +    L  +
Sbjct: 22  LKARGYRVVVLDLRREGEDLI-----------YVEGDVTREEDVRRAVARAQEEAPLFAV 70

Query: 61  FNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------------GVL 95
            + AG+     I   +         +V  V ++  F                     GV+
Sbjct: 71  VSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVI 130

Query: 96  LFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
           + TA++A     IG+A   Y  SK  V+ L      EL  + IRV ++A  +  TP
Sbjct: 131 VNTASVAAFEGQIGQA--AYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTP 184

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} Length = 253

 Score = 68.3 bits (168), Expect = 2e-14
 Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 26/163 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +  A V++AD+  +   A+ K+  +D    IS    +V+     K + D T  +FG +
Sbjct: 29  LAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAV-DVSDPESAKAMADRTLAEFGGI 87

Query: 58  DIMFNNAGIISNM-DRTTLDTDNEKVKRVMIMVVFLGVLLFT---------------ANL 101
           D + NNA I   M     L  D E  K+  + V   G L  T                N 
Sbjct: 88  DYLVNNAAIFGGMKLDFLLTIDPEYYKKF-MSVNLDGALWCTRAVYKKMTKRGGGAIVNQ 146

Query: 102 ATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++    +      Y ++K  + GL + L  ELG  +IR+N+IA
Sbjct: 147 SSTAAWLYSN--YYGLAKVGINGLTQQLSRELGGRNIRINAIA 187

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 Length = 303

 Score = 68.5 bits (168), Expect = 2e-14
 Identities = 28/168 (16%), Positives = 57/168 (33%), Gaps = 32/168 (19%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELIS------YVCCNVTIDSDVKNVFDFT--K 53
            ++  + V+IA  + +  ++   E  ++   +       + CN+  + +V N+   T   
Sbjct: 38  LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97

Query: 54  FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT--------------- 98
           FGK++ + NN G             ++    V +     G                    
Sbjct: 98  FGKINFLVNNGGG--QFLSPAEHISSKGWHAV-LETNLTGTFYMCKAVYSSWMKEHGGSI 154

Query: 99  ANLATETI----GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            N+   T              ++  V  L K+L +E     IR+N +A
Sbjct: 155 VNIIVPTKAGFPLAV--HSGAARAGVYNLTKSLALEWACSGIRINCVA 200

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} Length = 319

 Score = 68.6 bits (168), Expect = 2e-14
 Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 30/168 (17%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT--KFGK 56
            +    KV IAD++ D         +++     +  V  +V      K   D    +FG 
Sbjct: 28  LLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGP 87

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLFTANLATETIGEALYD- 112
           + I+ NNAG+     +   ++  +    ++   +  V  GV  F   +            
Sbjct: 88  VSILCNNAGVNLF--QPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGG 145

Query: 113 -------------------YLMSKYAVLGLMKNLCVELGQYDIRVNSI 141
                              Y  +K+AV GL ++L   L +Y+I V+ +
Sbjct: 146 HVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVL 193

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} Length = 250

 Score = 67.2 bits (165), Expect = 3e-14
 Identities = 23/161 (14%), Positives = 58/161 (36%), Gaps = 30/161 (18%)

Query: 7   AKVIIA----DVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
            +V++        + +   + +     +    +  ++T  +           K+G +DI+
Sbjct: 32  YRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDIL 91

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLATET 105
            N A +       +L    +  ++ ++ +  +                      N+A+  
Sbjct: 92  VNAAAM---FMDGSLSEPVDNFRK-IMEINVIAQYGILKTVTEIMKVQKNGYIFNVAS-R 146

Query: 106 IGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             +  +     Y  +K+A+LGL ++L  EL    IRV ++ 
Sbjct: 147 AAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLC 187

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* Length = 261

 Score = 67.5 bits (166), Expect = 3e-14
 Identities = 43/165 (26%), Positives = 71/165 (43%), Gaps = 28/165 (16%)

Query: 2   FIQHRAKVIIADVQD-DLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGK 56
           F   +AKV++      D   ++ +E      E I+ V  +VT++SDV N+      +FGK
Sbjct: 27  FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIA-VKGDVTVESDVINLVQSAIKEFGK 85

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA----------------N 100
           LD+M NNAG+      ++ +       +V I     G  L +                 N
Sbjct: 86  LDVMINNAGL--ENPVSSHEMSLSDWNKV-IDTNLTGAFLGSREAIKYFVENDIKGTVIN 142

Query: 101 LAT--ETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +++  E I   L+  Y  SK  +  + + L +E     IRVN+I 
Sbjct: 143 MSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIG 187

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 Length = 256

 Score = 67.6 bits (166), Expect = 3e-14
 Identities = 33/161 (20%), Positives = 51/161 (31%), Gaps = 31/161 (19%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
             V IAD  D   +A+  E +      ++    +V+    V    +      G  D++ N
Sbjct: 27  FAVAIADYNDATAKAVASEINQAGGHAVAVKV-DVSDRDQVFAAVEQARKTLGGFDVIVN 85

Query: 63  NAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA----------------NLA---- 102
           NAG+             E V +V   +   GV+                    N      
Sbjct: 86  NAGV--APSTPIESITPEIVDKVY-NINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG 142

Query: 103 -TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                  A+Y    SK+AV GL +    +L    I VN   
Sbjct: 143 HVGNPELAVYS--SSKFAVRGLTQTAARDLAPLGITVNGYC 181

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} Length = 285

 Score = 67.7 bits (166), Expect = 4e-14
 Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 22/128 (17%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV-- 89
           +  ++     V      T  +FG +DI  NNA  I+    +  +   ++   +  I V  
Sbjct: 70  IVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAIN--LGSIEEVPLKRFDLMNGIQVRG 127

Query: 90  VFL---------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY 134
            +                 +L  +  +  E        Y+M+KY +      +  EL   
Sbjct: 128 TYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELRDA 187

Query: 135 DIRVNSIA 142
            I  N++ 
Sbjct: 188 GIASNTLW 195

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} Length = 247

 Score = 66.8 bits (164), Expect = 5e-14
 Identities = 36/166 (21%), Positives = 59/166 (35%), Gaps = 27/166 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDFT--KFG 55
           +  H A V++    +     +  +  S      LI  +          + +      +FG
Sbjct: 34  YAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFG 93

Query: 56  KLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMV----VFL--------------GVLLF 97
           +LD + +NA II           +E   +VM  V     F+                + F
Sbjct: 94  RLDGLLHNASIIGPRTPLE-QLPDEDFMQVM-HVNVNATFMLTRALLPLLKRSEDASIAF 151

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVEL-GQYDIRVNSIA 142
           T++            Y +SK+A  GLM+ L  EL G   +R NSI 
Sbjct: 152 TSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAVRANSIN 197

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} Length = 266

 Score = 66.8 bits (164), Expect = 7e-14
 Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 28/165 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL--ISYVCCNVTIDSDVKNVFDFT--KFGKL 57
            +   A V+I+D  +        +     L  +  V C+VT    V  +   T  K G+L
Sbjct: 43  ALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102

Query: 58  DIMFNNAGIISNMDRTTLDTDNE------------------KVKRVMIMVVFLGVLLFTA 99
           D++ NNAG+        +D  +E                     R    V   GV++  A
Sbjct: 103 DVLVNNAGL--GGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNA 160

Query: 100 NLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++        ++   Y  +K  V+ L +   +E  ++ +R+N+++
Sbjct: 161 SVLGWRAQHSQS--HYAAAKAGVMALTRCSAIEAVEFGVRINAVS 203

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} Length = 276

 Score = 66.1 bits (162), Expect = 1e-13
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 28/161 (17%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           A+V I     + C        +      +  +++ ++  + +         +LDI+ NNA
Sbjct: 54  ARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNA 113

Query: 65  GII--SNMDRTT-------LDTDNEKVKRVMIMVVFLGVLLFTA----------NLA--- 102
           G    + ++          +  +   V  V   +  L  LL  +          N+    
Sbjct: 114 GTSWGAALESYPVSGWEKVMQLN---VTSVFSCIQQLLPLLRRSASAENPARVINIGSVA 170

Query: 103 -TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               +GE  Y Y  SK A+  L + L  EL    I VN IA
Sbjct: 171 GISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIA 211

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A Length = 252

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 30/165 (18%), Positives = 66/165 (40%), Gaps = 27/165 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVC-CNVTIDSDVKNVFDFT--KFG 55
           + ++ A VI+    ++  R +    + +   +   ++         + + +       + 
Sbjct: 32  YARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYP 91

Query: 56  KLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMV----VFL--------------GVLLF 97
           +LD + +NAG++ ++   + + + +  + VM  V     F+              G L+F
Sbjct: 92  RLDGVLHNAGLLGDVCPMS-EQNPQVWQDVM-QVNVNATFMLTQALLPLLLKSDAGSLVF 149

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           T++            Y  SK+A  G+M+ L  E  Q  +RVN I 
Sbjct: 150 TSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQ-RLRVNCIN 193

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} Length = 266

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 33/161 (20%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
                A+V +AD     +   L           ++  ++   +    +        G+LD
Sbjct: 48  LRAAGARVAVADRAVAGIAADL-----------HLPGDLREAAYADGLPGAVAAGLGRLD 96

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANL 101
           I+ NNAG+IS       +T +      +   +   F               G ++  A+ 
Sbjct: 97  IVVNNAGVIS--RGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASC 154

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                G     Y ++K A+  L + + ++     IR+N++ 
Sbjct: 155 WGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVC 195

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} Length = 262

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 30/163 (18%), Positives = 56/163 (34%), Gaps = 35/163 (21%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A+V++     +  RA+ +E  +         C+++    +           G+ D++ NN
Sbjct: 54  ARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNN 113

Query: 64  AGIISNMDRTTLDTDNEKVK----RVMIMVVFLGVLLFTA---------------NLA-- 102
           AG+               +K      +I V      L                  N++  
Sbjct: 114 AGV------GWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSL 167

Query: 103 ---TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                    A   Y  SK+ + GLM +   EL Q+ +RV+ +A
Sbjct: 168 AGKNPVADGA--AYTASKWGLNGLMTSAAEELRQHQVRVSLVA 208

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} Length = 258

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 34/161 (21%), Positives = 59/161 (36%), Gaps = 29/161 (18%)

Query: 7   AKVIIADV--QDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
             + +AD+  Q++      K  ++   + +     +VT  ++  +  D    K G  D++
Sbjct: 27  FDIAVADLPQQEEQAAETIKLIEAADQKAVFVGL-DVTDKANFDSAIDEAAEKLGGFDVL 85

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA----------------NLA-- 102
            NNAGI     +  L+   E +K++   V    V                     N A  
Sbjct: 86  VNNAGIAQ--IKPLLEVTEEDLKQIY-SVNVFSVFFGIQAASRKFDELGVKGKIINAASI 142

Query: 103 TETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               G  +   Y  +K+AV GL +    EL      VN+ A
Sbjct: 143 AAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYA 183

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} Length = 273

 Score = 65.3 bits (160), Expect = 2e-13
 Identities = 30/154 (19%), Positives = 59/154 (38%), Gaps = 20/154 (12%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD-FTKFGKLDIMFNNAG 65
           A V+     D +     +  D       V  ++       NV +      ++D++ NNAG
Sbjct: 56  AHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAG 115

Query: 66  IISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTANLATETIGE 108
           II        +    + + V+   +   ++              G ++  A++ +   G 
Sbjct: 116 II--ARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGR 173

Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +  Y  SK+AV+GL + L  E     + VN++A
Sbjct: 174 NVAAYAASKHAVVGLTRALASEWAGRGVGVNALA 207

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} Length = 274

 Score = 65.3 bits (160), Expect = 3e-13
 Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 23/129 (17%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM-IMV-- 89
           + C++  +  V+     T   FG +DI+ NNA  I    R TLDT  ++   +  +    
Sbjct: 67  LKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIW--LRGTLDTPMKRFDLMQQVNARG 124

Query: 90  VFL---------------GVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQ 133
            F+                +L      +           Y ++K  +  +   L  E G 
Sbjct: 125 SFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEFGP 184

Query: 134 YDIRVNSIA 142
             + +N++ 
Sbjct: 185 QGVAINALW 193

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 Length = 244

 Score = 64.9 bits (159), Expect = 3e-13
 Identities = 20/160 (12%), Positives = 56/160 (35%), Gaps = 30/160 (18%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
             ++++         +  E  ++  L   +  +++  +DV+ +      ++G +D + NN
Sbjct: 34  PVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNN 93

Query: 64  AGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLATETI 106
           AG+     +   T +  +       +     G    T                 + +   
Sbjct: 94  AGVGRFGALSDLTEEDFDY-----TMNTNLKGTFFLTQALFALMERQHSGHIFFITS-VA 147

Query: 107 GEALY----DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               +     Y MSK+   GL++ + +   + ++R+  + 
Sbjct: 148 ATKAFRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQ 187

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 Length = 267

 Score = 64.8 bits (159), Expect = 3e-13
 Identities = 35/163 (21%), Positives = 59/163 (36%), Gaps = 34/163 (20%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELIS--YVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
             V++A    +      ++      +      C+V+   +VK + +    KFGKLD + N
Sbjct: 46  CSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVN 105

Query: 63  NAGIISNMD---------RTTLDTDNEK--------VKRVMIM-----VVFLG-VLLFTA 99
            AGI              R  ++  N             ++       ++ +G + +   
Sbjct: 106 AAGINRRHPAEEFPLDEFRQVIEV-NLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV 164

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +   +       Y  SK  V  L K L  E G+Y IRVN IA
Sbjct: 165 TMPNISA------YAASKGGVASLTKALAKEWGRYGIRVNVIA 201

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* Length = 265

 Score = 64.5 bits (158), Expect = 4e-13
 Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 24/163 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT--KFGK 56
            ++  A V       +  RA             +    C+V     V+   +      G 
Sbjct: 28  LLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGC 87

Query: 57  LDIMFNNAGIISNMDRTTLDTDNE---KVKRVMIMVVFL--------------GVLLFTA 99
             I+ NNAG       T  +T +E   +  ++    V                  ++   
Sbjct: 88  ASILVNNAGQ--GRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVN 145

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +L        +     ++  V  L++++  E     +RVN I 
Sbjct: 146 SLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGIL 188

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} Length = 254

 Score = 64.2 bits (157), Expect = 5e-13
 Identities = 26/161 (16%), Positives = 58/161 (36%), Gaps = 25/161 (15%)

Query: 2   FIQHRAKVIIADV--QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
                   ++  V   +   + L +++       YV  ++T DS +K + +      GK+
Sbjct: 22  LFSLDKDTVVYGVARSEAPLKKLKEKYGDRFF--YVVGDITEDSVLKQLVNAAVKGHGKI 79

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL-------------GVLLFTANL 101
           D +  NAG++  +     + D    K++       +               G ++F ++ 
Sbjct: 80  DSLVANAGVLEPVQN-VNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSD 138

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           A      +   Y  SK A+      L  E  +  ++  ++A
Sbjct: 139 ACNMYFSSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVA 177

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* Length = 241

 Score = 63.9 bits (156), Expect = 6e-13
 Identities = 24/171 (14%), Positives = 46/171 (26%), Gaps = 23/171 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
           F      V   DV ++   +        +  +        D     V       K+D + 
Sbjct: 27  FRARNWWVASIDVVENEEASASVIVKMTDSFTEQA-----DQVTAEVGKLLGDQKVDAIL 81

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL------------GVLLFTANLATETI 106
             AG  +        +  +    +    I    +            G+L      A    
Sbjct: 82  CVAGGWA-GGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG 140

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIAHIVSATPFFCNAM 155
              +  Y M+K AV  L ++L  +           ++  +   TP    +M
Sbjct: 141 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM 191

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 Length = 272

 Score = 63.8 bits (156), Expect = 8e-13
 Identities = 30/177 (16%), Positives = 63/177 (35%), Gaps = 27/177 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTK--FGKL 57
           F + ++K+++ D+          +      ++ ++V  + +   D+ +     K   G +
Sbjct: 51  FAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVV-DCSNREDIYSSAKKVKAEIGDV 109

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFLGVLLF--------------TAN 100
            I+ NNAG++         T + ++++     ++  F     F               A+
Sbjct: 110 SILVNNAGVVYT--SDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVAS 167

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD---IRVNSIAHIVSATPFFCNA 154
            A       L  Y  SK+A +G  K L  EL       ++   +      T F  N 
Sbjct: 168 AAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNP 224

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} Length = 256

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 37/154 (24%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A V++ D++ +   A+             + CNVT +   + V      +FGK+ ++ NN
Sbjct: 37  ASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNN 96

Query: 64  AGI-ISNMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLATETIGE 108
           AG          +  D E   ++ +  +F               G +L  +++A E    
Sbjct: 97  AGGGGPKPFDMPMS-DFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNV 155

Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +  Y  SK AV  L +N+  ++G   IRVN+IA
Sbjct: 156 RMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIA 189

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 236

 Score = 63.1 bits (154), Expect = 1e-12
 Identities = 27/169 (15%), Positives = 55/169 (32%), Gaps = 29/169 (17%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT----KFGKLDIMFN 62
             V+  D+  +         D  +    V  N       +++ + T    +  ++D +F 
Sbjct: 28  YTVLNIDLSAN---------DQADSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFC 78

Query: 63  NAGIISNMDRTTLDTDN--EKVKRVMIMVVFL------------GVLLFTANLATETIGE 108
            AG  +    ++ D     + + +  +    +            G+L  T   A      
Sbjct: 79  VAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP 138

Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYD--IRVNSIAHIVSATPFFCNAM 155
           ++  Y M+K AV  L  +L  +         V +I  +   TP     M
Sbjct: 139 SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM 187

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} Length = 263

 Score = 63.0 bits (154), Expect = 1e-12
 Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 26/162 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
             +  A V IAD+     +A+    ++      V  +VT  + V           G  D+
Sbjct: 32  LDKAGATVAIADLDVMAAQAVVAGLENGGFA--VEVDVTKRASVDAAMQKAIDALGGFDL 89

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL---------------GVLLFTANL 101
           +  NAG+ +   R  +D  +E+      +    VFL               GV++ TA+L
Sbjct: 90  LCANAGVST--MRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASL 147

Query: 102 ATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           A +  G   L  Y  SK+AV G  + L  E+   +IRVN + 
Sbjct: 148 AAKV-GAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVC 188

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} Length = 317

 Score = 63.4 bits (155), Expect = 1e-12
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 37/170 (21%)

Query: 7   AKVIIADVQDDLCR---ALCKEFDSDELISYV----------CCNVTIDSDVKNVFDFT- 52
           A ++  D+         A     +  E +  V            +V   + ++ V D   
Sbjct: 71  ADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEAL 130

Query: 53  -KFGKLDIMFNNAGIISN-----MD----RTTLDTDNEK--------VKRVMIMVVFLGV 94
            +FG +DI+ +N GI +      +        L T N          V   MI     G 
Sbjct: 131 AEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQT-NLIGAWHACRAVLPSMIERGQGGS 189

Query: 95  LLFTANLA--TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++F ++        G++   Y  SK+ V GLM +L  E+G+++IRVNS+ 
Sbjct: 190 VIFVSSTVGLRGAPGQS--HYAASKHGVQGLMLSLANEVGRHNIRVNSVN 237

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} Length = 260

 Score = 62.6 bits (153), Expect = 2e-12
 Identities = 22/168 (13%), Positives = 55/168 (32%), Gaps = 43/168 (25%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           +     +V+              +  +D  I  V  +++       +      +FG++D 
Sbjct: 48  YRDRNYRVVATSRSI--------KPSADPDIHTVAGDISKPETADRIVREGIERFGRIDS 99

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMV----VFLG---------------------V 94
           + NNAG+   + +  ++   E      + V     F                        
Sbjct: 100 LVNNAGV--FLAKPFVEMTQEDYDHN-LGVNVAGFFHITQRAAAEMLKQGSGHIVSITTS 156

Query: 95  LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           L+         +G       ++K  +  + ++L +E  +  +RVN+++
Sbjct: 157 LVDQPM-----VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVS 199

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A Length = 266

 Score = 62.5 bits (153), Expect = 2e-12
 Identities = 28/164 (17%), Positives = 57/164 (34%), Gaps = 37/164 (22%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFG-KLDIMFN 62
           A +      +        ++      ++   C+ ++  + + +       FG KLDI+ N
Sbjct: 39  AVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILIN 98

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM----------------IM-------VVFLG-VLLFT 98
           N G      + TLD   E     +                ++       ++F+  +    
Sbjct: 99  NLGA--IRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVV 156

Query: 99  ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +  +  +I      Y  +K A+  L +NL  E     IR N++A
Sbjct: 157 SA-SVGSI------YSATKGALNQLARNLACEWASDGIRANAVA 193

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} Length = 260

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 28/164 (17%), Positives = 62/164 (37%), Gaps = 31/164 (18%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT---KFGKLDIMF 61
           A V I     D  R + +E  S   + +  V C+ + +S+V+++F+     + G+LD++ 
Sbjct: 30  ATVYITGRHLDTLRVVAQEAQSLGGQCVP-VVCDSSQESEVRSLFEQVDREQQGRLDVLV 88

Query: 62  NNAGIISNMDRTTLDT--------DNEKVKRVMIMVVFL--------------GVLLFTA 99
           NNA         T +           + +  V +   +               G+++  +
Sbjct: 89  NNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVIS 148

Query: 100 NLATET-IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +  +   +    Y   + K A   L  +   EL ++ +   S+ 
Sbjct: 149 SPGSLQYMFNVPYG--VGKAACDKLAADCAHELRRHGVSCVSLW 190

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} Length = 346

 Score = 62.1 bits (151), Expect = 4e-12
 Identities = 27/130 (20%), Positives = 50/130 (38%), Gaps = 26/130 (20%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
              +V  +  +    +    KFG +DI+ NNA  IS     TLDT  +++   M+ V   
Sbjct: 106 CIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAIS--LTNTLDTPTKRLDL-MMNVNTR 162

Query: 93  GVLLFTA---------------NLATETIGEALYD-----YLMSKYAVLGLMKNLCVELG 132
           G  L +                N++       ++      Y ++KY +   +  +  E  
Sbjct: 163 GTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEFK 222

Query: 133 QYDIRVNSIA 142
             +I VN++ 
Sbjct: 223 -GEIAVNALW 231

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} Length = 294

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 18/125 (14%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           +  +++ +S  +++        G LDI+   AG          D  +E+ ++     +  
Sbjct: 105 LPGDLSDESFARSLVHKAREALGGLDILALVAGKQ-TAIPEIKDLTSEQFQQTFAVNVFA 163

Query: 90  VFL------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
           +F               ++ T+++        L DY  +K A+L   + L  ++ +  IR
Sbjct: 164 LFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIR 223

Query: 138 VNSIA 142
           VN +A
Sbjct: 224 VNIVA 228

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} Length = 262

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 31/146 (21%), Positives = 51/146 (34%), Gaps = 21/146 (14%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
              +++ + +V  +FDF   +FGK+DI  N  G +    +  ++T   +    M  +   
Sbjct: 68  YQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVL--KKPIVETSEAEFDA-MDTINNK 124

Query: 93  GVLLFTA-------------NLAT--ETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDI 136
               F                +AT         Y  Y  +K  V    +    EL +  I
Sbjct: 125 VAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQI 184

Query: 137 RVNSIAHIVSATPFFCNAMGIDKKTF 162
            VN+IA     T FF      +   F
Sbjct: 185 SVNAIAPGPMDTSFFYGQETKESTAF 210

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 Length = 263

 Score = 60.6 bits (148), Expect = 1e-11
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 46/170 (27%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A ++  D ++ L        +++ +   V  +V+    V+ VF     +FG+L  
Sbjct: 26  FAREGASLVAVDREERLLAEAVAALEAEAIA--VVADVSDPKAVEAVFAEALEEFGRLHG 83

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVM----------------IM-----------VVFL 92
           + + AG+       + +   E  ++V+                ++           V  L
Sbjct: 84  VAHFAGV--AHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL 141

Query: 93  GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           G             G A   Y   K  V+GL + L +EL +  +RVN + 
Sbjct: 142 G-----------AFGLA--HYAAGKLGVVGLARTLALELARKGVRVNVLL 178

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 Length = 265

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 27/166 (16%), Positives = 55/166 (33%), Gaps = 33/166 (19%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
           A V +          + ++   +   +  +Y C +V+    V           G +  + 
Sbjct: 39  ANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQC-DVSNTDIVTKTIQQIDADLGPISGLI 97

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVM----------------IMVVFL--GVLLFTA---- 99
            NAG+  ++ +   +  +E    V                 + +     G ++ T+    
Sbjct: 98  ANAGV--SVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS 155

Query: 100 ---NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              N ++         Y  SK A   L+K L  E     IRVN+++
Sbjct: 156 QIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALS 201

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* Length = 258

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 23/128 (17%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
           V  NV   + +K +F      FG+LD+  NNA     + R  ++ +        + +   
Sbjct: 59  VKANVGQPAKIKEMFQQIDETFGRLDVFVNNAAS--GVLRPVMELEETHWDWT-MNINAK 115

Query: 93  GVLLFTA---------------NLAT--ETIGEALY-DYLMSKYAVLGLMKNLCVELGQY 134
            +L                   ++++         Y    +SK A+  L + L VEL   
Sbjct: 116 ALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPK 175

Query: 135 DIRVNSIA 142
            I VN+++
Sbjct: 176 QIIVNAVS 183

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} Length = 281

 Score = 60.0 bits (146), Expect = 2e-11
 Identities = 30/158 (18%), Positives = 63/158 (39%), Gaps = 24/158 (15%)

Query: 7   AKVIIADV-QDDLCRALCKEFDSDE--LISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
           A +++      D  R +  E        + +   ++T  S++ ++      +FG  DI+ 
Sbjct: 50  ANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILV 109

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLATE 104
           NNAG+         D   E+  R++ + +   F               G ++  A+    
Sbjct: 110 NNAGV--QFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGL 167

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                   Y+ +K+ ++GL K + +E+ +  + VNSI 
Sbjct: 168 VASPFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSIC 205

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A Length = 270

 Score = 59.9 bits (146), Expect = 2e-11
 Identities = 25/127 (19%), Positives = 45/127 (35%), Gaps = 22/127 (17%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
           +  ++    ++  +FD     FG LDI  +N+G++S       D   E+  RV   +   
Sbjct: 73  IKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVS--FGHLKDVTEEEFDRV-FSLNTR 129

Query: 93  GVLLFTA-------------NL---ATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYD 135
           G                         ++      +  Y  SK AV   ++    + G   
Sbjct: 130 GQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKK 189

Query: 136 IRVNSIA 142
           I VN++A
Sbjct: 190 ITVNAVA 196

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* Length = 254

 Score = 59.6 bits (145), Expect = 2e-11
 Identities = 28/172 (16%), Positives = 53/172 (30%), Gaps = 29/172 (16%)

Query: 2   FIQHRAK-VIIADVQDDL-CRALCKEFDSDELISYVCCNVTID-SDVKNVFDFT--KFGK 56
            ++   K  +I D  ++    A  K  +    I++   +VT+  ++ K +      +   
Sbjct: 25  LVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT 84

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALY----- 111
           +DI+ N AGI+        D   E+   +    +                G         
Sbjct: 85  VDILINGAGILD-------DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANIC 137

Query: 112 ------------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                        Y  SK AV+    +L        +   SI   ++ TP  
Sbjct: 138 SVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV 189

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... Length = 286

 Score = 59.6 bits (145), Expect = 3e-11
 Identities = 26/175 (14%), Positives = 55/175 (31%), Gaps = 32/175 (18%)

Query: 7   AKVIIADV-QDDLCR--ALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMF 61
           A V++    ++ L +  + C E  +     Y+   +   +  +          G LD++ 
Sbjct: 53  AHVVVTARSKETLQKVVSHCLELGAASAH-YIAGTMEDMTFAEQFVAQAGKLMGGLDMLI 111

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA--------------NLA----- 102
            N              D   V++ M  V FL  ++ T                ++     
Sbjct: 112 LNHITN--TSLNLFHDDIHHVRKSM-EVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK 168

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVNSIAHIVSATPFFCNAM 155
                 A   Y  SK+A+ G   ++  E    + ++ +      +  T     A+
Sbjct: 169 VAYPMVAA--YSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV 221

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} Length = 245

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 22/163 (13%), Positives = 50/163 (30%), Gaps = 26/163 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD-FTKFGKLDIMFNNAG 65
               +    + L  AL +       +  +  ++  +   +   D       +D + + A 
Sbjct: 30  IVYALGRNPEHL-AALAEIEG----VEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAA 84

Query: 66  IISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLA-------------TETIGEALYD 112
           +      TT++  +       + +  +     +  L                  G   + 
Sbjct: 85  V---ARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHP 141

Query: 113 ----YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
               Y  SK+A+ GL      E     IRV++++   + TP  
Sbjct: 142 GNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPML 184

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} Length = 271

 Score = 59.5 bits (145), Expect = 3e-11
 Identities = 26/127 (20%), Positives = 41/127 (32%), Gaps = 22/127 (17%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
           +  +      ++     T    G LDI+ N+AGI         +T       V + V F 
Sbjct: 86  IRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWH--SAPLEETTVADFDEV-MAVNFR 142

Query: 93  GVLLFTA-------------NLATETIGEALY----DYLMSKYAVLGLMKNLCVELGQYD 135
              +                 + +       +     Y  SK A+ GL K L  +LG   
Sbjct: 143 APFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRG 202

Query: 136 IRVNSIA 142
           I VN + 
Sbjct: 203 ITVNIVH 209

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} Length = 272

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 32/132 (24%), Positives = 58/132 (43%), Gaps = 26/132 (19%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
           +  +V   +D+  +F     +FG+LD + NNAGI+ +  +   +   E+++R+ + V   
Sbjct: 81  IPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIV-DYPQRVDEMSVERIERM-LRVNVT 138

Query: 93  GVLLFTA------------------NLAT--ETIGEA--LYDYLMSKYAVLGLMKNLCVE 130
           G +L  A                  N+++    +G A    DY  SK A+      L  E
Sbjct: 139 GSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLARE 198

Query: 131 LGQYDIRVNSIA 142
           +    IRVN++ 
Sbjct: 199 VAAEGIRVNAVR 210

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* Length = 283

 Score = 58.4 bits (142), Expect = 7e-11
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 18/125 (14%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISN--MDRTTLDTDNEKVKRVMIMVV 90
           V  NV +  D+  +F+     FGKLDI+ +N+G++S   +   T + + ++V  +     
Sbjct: 84  VKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPE-EFDRVFTINTRGQ 142

Query: 91  FL------------GVLLFTANLATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIR 137
           F             G L+   ++  +      +  Y  SK A+    + + +++    I 
Sbjct: 143 FFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKIT 202

Query: 138 VNSIA 142
           VN +A
Sbjct: 203 VNVVA 207

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} PDB: 3gdf_A Length = 267

 Score = 57.9 bits (141), Expect = 8e-11
 Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 33/163 (20%)

Query: 7   AKVIIADV-QDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
           A V I    +        KE +     +  +Y C  V      + +       FG++D  
Sbjct: 47  AAVAITYASRAQGAEENVKELEKTYGIKAKAYKC-QVDSYESCEKLVKDVVADFGQIDAF 105

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLLFTA---- 99
             NAG     D   LD   E    V+   +   F               G L+ TA    
Sbjct: 106 IANAGA--TADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSG 163

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++A     +  Y+  ++K   + + ++L  E   +  RVNSI+
Sbjct: 164 HIANFPQEQTSYN--VAKAGCIHMARSLANEWRDF-ARVNSIS 203

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} Length = 267

 Score = 58.0 bits (141), Expect = 1e-10
 Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 22/155 (14%)

Query: 7   AKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNN 63
           A V+I   +++      KE  +   D ++  V  ++  +   ++V +  K+ K+DI+ NN
Sbjct: 35  ANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--KYPKVDILINN 92

Query: 64  AGIISNMD--RTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLATETIG 107
            GI   ++      D D  K+  V IM                  G ++F A+ A     
Sbjct: 93  LGIFEPVEYFDIP-DEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS 151

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           + +  Y  +K   L L ++L       ++ VN+I 
Sbjct: 152 QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIM 186

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 Length = 274

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 20/126 (15%)

Query: 35  VCCNVTIDSDVKNVFDFTK--FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           +  +++  S+V  +FD     FG LD + +N+G+        L+   E   +V       
Sbjct: 76  IQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEV--WCDELEVTQELFDKVFNLNTRG 133

Query: 90  VFL------------GVLLFTANLATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDI 136
            F             G ++ T+++A    G   +  Y  SK AV G  +   V+ G   +
Sbjct: 134 QFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGV 193

Query: 137 RVNSIA 142
            VN IA
Sbjct: 194 TVNCIA 199

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* Length = 254

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 51/168 (30%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
             V   D        L          +Y       + +   + +     +G++D++ +N 
Sbjct: 26  HTVACHDESFKQKDEL-----EAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 80

Query: 65  GIISN---MDRTT-------LDTDNEK--------VKRVMI------------MVVFLGV 94
                   +D+         ++   +         V   M                F   
Sbjct: 81  IFAPEFQPIDKYAVEDYRGAVEA-LQIRPFALVNAVASQMKKRKSGHIIFITSATPFGP- 138

Query: 95  LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                         +   Y  ++     L   L  ELG+Y+I V +I 
Sbjct: 139 ----------WKELS--TYTSARAGACTLANALSKELGEYNIPVFAIG 174

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} Length = 235

 Score = 57.2 bits (139), Expect = 1e-10
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 30/182 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL--ISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +    + +     D    +  E   ++   + Y   +V+    V+        +FG +
Sbjct: 22  LARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLA 102
           D++  NAG+        L+  +E+    MI V  LGV                      +
Sbjct: 82  DVVVANAGL---GYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTS 138

Query: 103 TETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID 158
              +   L      Y+ +K+A   L++   +E    D+R   +      T F  +  G  
Sbjct: 139 --DVSARLIPYGGGYVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFGGSKPGKP 194

Query: 159 KK 160
           K+
Sbjct: 195 KE 196

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* Length = 258

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 30/169 (17%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGK 56
           F +  AKV +                 +D  +   +   ++      + + D    KFG 
Sbjct: 27  FARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAA-DLATSEACQQLVDEFVAKFGG 85

Query: 57  LDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVFL-------------------GV 94
           +D++ NNAG +    +   + D+     VM   I  V +                     
Sbjct: 86  IDVLINNAGGL-VGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSA 144

Query: 95  LLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           ++ T ++A  T G      Y  +K  +  + KN      +  +R N ++
Sbjct: 145 VISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVS 193

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* Length = 260

 Score = 57.2 bits (139), Expect = 2e-10
 Identities = 27/166 (16%), Positives = 59/166 (35%), Gaps = 40/166 (24%)

Query: 7   AKVIIADVQDD-----LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           A +++    D      +   L  +      + Y   +++    V+ + D    + G++DI
Sbjct: 29  ADIVLNGFGDAAEIEKVRAGLAAQHGVK--VLYDGADLSKGEAVRGLVDNAVRQMGRIDI 86

Query: 60  MFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLG---------------------VLL 96
           + NNAGI   + ++    +   + +  + +  VF G                        
Sbjct: 87  LVNNAGIQHTALIEDFPTE-KWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG 145

Query: 97  FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             A+       ++   Y+ +K+ V+G  K   +E     I  N+I 
Sbjct: 146 LVAS-----ANKS--AYVAAKHGVVGFTKVTALETAGQGITANAIC 184

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A Length = 239

 Score = 56.7 bits (138), Expect = 2e-10
 Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 24/129 (18%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           +  ++    D K +        G L ++ + A +   + +  L+   E+ +RV+   + V
Sbjct: 48  LPTDLE-KDDPKGLVKRALEALGGLHVLVHAAAVN--VRKPALELSYEEWRRVLYLHLDV 104

Query: 90  VFL--------------GVLLFTANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQ 133
            FL              G +LF  ++ T T G  +    Y  +K A+LGL + L  E  +
Sbjct: 105 AFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWAR 164

Query: 134 YDIRVNSIA 142
             IRVN + 
Sbjct: 165 LGIRVNLLC 173

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} Length = 281

 Score = 56.8 bits (138), Expect = 3e-10
 Identities = 37/203 (18%), Positives = 63/203 (31%), Gaps = 63/203 (31%)

Query: 7   AKVIIADVQDDLCR---ALCKEFDSDELISYV----------CCNVTIDSDVKNVFDFT- 52
           A + I D  ++       L    D  E ++ V            +V   + +++      
Sbjct: 35  ADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAE 94

Query: 53  -KFGKLDIMFNNAGIISN-----MD----RTTLDTDNEK--------VKRVMIM------ 88
              G +DI   NAGI +      ++       + T N          V   MI       
Sbjct: 95  DTLGGIDIAITNAGISTIALLPEVESAQWDEVIGT-NLTGTFNTIAAVAPGMIKRNYGRI 153

Query: 89  -----VVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH 143
                ++        A+            Y+ SK+ V+GL K    +L  Y I VN++A 
Sbjct: 154 VTVSSMLGHSANFAQAS------------YVSSKWGVIGLTKCAAHDLVGYGITVNAVA- 200

Query: 144 IVSATPFFCN-AMGIDKKTFKEL 165
                P      M  +   F  +
Sbjct: 201 -----PGNIETPMTHNDFVFGTM 218

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A Length = 255

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 29/158 (18%), Positives = 62/158 (39%), Gaps = 28/158 (17%)

Query: 7   AKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A +++    D     A            +   +++  + ++ +F     +FG +DI+ NN
Sbjct: 29  ANIVLNGFGDPAPALAEIARHGVK--AVHHPADLSDVAQIEALFALAEREFGGVDILVNN 86

Query: 64  AGIISNMDRTTLDTDNEKVKRVM-IMV--VFL--------------GVLLFTANLATET- 105
           AGI             E   +++ + +  VF               G ++  A++     
Sbjct: 87  AGI--QHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVG 144

Query: 106 -IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             G+A   Y+ +K+ V+GL K + +E    ++  N+I 
Sbjct: 145 STGKA--AYVAAKHGVVGLTKVVGLETATSNVTCNAIC 180

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} Length = 244

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 22/159 (13%), Positives = 49/159 (30%), Gaps = 31/159 (19%)

Query: 7   AKVIIADV-QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
             V+  D    D       E                +   + + D T      +D + +N
Sbjct: 26  YTVVCHDASFADAAERQRFE------SENPGTIALAEQKPERLVDATLQHGEAIDTIVSN 79

Query: 64  AGIISNMDRTTLDTDNE----KVKRVMIMVVFL--------------GVLLFTANLATET 105
             I   M+R  L+  +E    ++   + +   L                ++F  +   + 
Sbjct: 80  DYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKK 139

Query: 106 --IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                 LY    ++ A + L+++    L +  I + +I 
Sbjct: 140 PLAYNPLYG--PARAATVALVESAAKTLSRDGILLYAIG 176

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} Length = 255

 Score = 55.7 bits (135), Expect = 5e-10
 Identities = 29/157 (18%), Positives = 48/157 (30%), Gaps = 21/157 (13%)

Query: 7   AKVIIADV-QDDLCRALCKEFDSDELISYVC--CNVTIDSDVKNVFDFT--KFGKLDIMF 61
             VI  D  Q D+   L      +  ++ V   C   +D  V             L +  
Sbjct: 26  HTVIGIDRGQADIEADLSTPGGRETAVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAV 85

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVM----------------IMVVFLGVLLFTANLATET 105
           N  G+ + +D         +    +                ++   L      A    E 
Sbjct: 86  NYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQ 145

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            G+    Y  SKYAV  L +   V+     +R+N +A
Sbjct: 146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVA 182

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} Length = 259

 Score = 55.6 bits (135), Expect = 6e-10
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 20/126 (15%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           +  ++T  ++V+        KFG++  + + AG +    +T  + D     +V+   +  
Sbjct: 63  IKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLI-ARKTIAEMDEAFWHQVLDVNLTS 121

Query: 90  VFL------------GVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDI 136
           +FL            G ++  ++ A    G      Y  SK AV+   + L  E+G   I
Sbjct: 122 LFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGP-KI 180

Query: 137 RVNSIA 142
           RVN++ 
Sbjct: 181 RVNAVC 186

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* Length = 291

 Score = 55.6 bits (135), Expect = 7e-10
 Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 18/125 (14%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           +  +++ +   K++   T  + G L+I+ NN        +       E++++     I  
Sbjct: 102 LPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQ-QYPQQGLEYITAEQLEKTFRINIFS 160

Query: 90  VFL------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR 137
            F              V++ TA++      E L DY  +K A++   ++L   L Q  IR
Sbjct: 161 YFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIR 220

Query: 138 VNSIA 142
           VN +A
Sbjct: 221 VNGVA 225

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} Length = 267

 Score = 55.3 bits (134), Expect = 9e-10
 Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 21/126 (16%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL 92
              +V+  + V+ +F      FG +D++ NNAGI+     T  +T +    RV I V   
Sbjct: 82  AQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMP--LTTIAETGDAVFDRV-IAVNLK 138

Query: 93  GVLLFTA-------------NLATETIGEALYD---YLMSKYAVLGLMKNLCVELGQYDI 136
           G                   N++T  +G        Y  +K  V  +   L  EL   DI
Sbjct: 139 GTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDI 198

Query: 137 RVNSIA 142
            VN++A
Sbjct: 199 TVNAVA 204

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* Length = 249

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 37/160 (23%), Positives = 58/160 (36%), Gaps = 32/160 (20%)

Query: 7   AKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
           A + IAD+       A  +      L   V C+V+   DV+         FG+ DI+ NN
Sbjct: 32  ADIAIADLVPAPEAEAAIRNLGRRVL--TVKCDVSQPGDVEAFGKQVISTFGRCDILVNN 89

Query: 64  AGIISNMDRTTLDTDNEKVKRVMIMVVFL-GVLLFTA---------------NLA----- 102
           AGI         +   E+ K+     + +    L                  NL      
Sbjct: 90  AGIYP--LIPFDELTFEQWKKT--FEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW 145

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            +        Y+ +K A +G  + L  +LG+  I VN+IA
Sbjct: 146 LKIEAYT--HYISTKAANIGFTRALASDLGKDGITVNAIA 183

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* Length = 257

 Score = 54.6 bits (132), Expect = 1e-09
 Identities = 22/175 (12%), Positives = 44/175 (25%), Gaps = 55/175 (31%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT---KFGKLDIMFNN 63
            +++  D++D                  V  +++     K             +D +   
Sbjct: 26  HQIVGIDIRDA----------------EVIADLSTAEGRKQAIADVLAKCSKGMDGLVLC 69

Query: 64  AGIISNMD--RTTLDTDNEKVKRVM-------------IMVVFLGVLLFTANLATETIGE 108
           AG+          +  +      +M               VV   V           +  
Sbjct: 70  AGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL 129

Query: 109 ALYD---------------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           AL                       Y  SK A+   ++      G+  +R+N+IA
Sbjct: 130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIA 184

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* Length = 247

 Score = 54.5 bits (132), Expect = 1e-09
 Identities = 35/164 (21%), Positives = 57/164 (34%), Gaps = 29/164 (17%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
                A V IA  + +  RAL  E  +    +  +  +V     V      T    G LD
Sbjct: 27  LAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLD 86

Query: 59  IMFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA--------------NLA 102
           I+ NNAGI  +  ++      D  +    MI    LG++  T                ++
Sbjct: 87  ILVNNAGIMLLGPVEDADTT-DWTR----MIDTNLLGLMYMTRAALPHLLRSKGTVVQMS 141

Query: 103 TETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +   G         Y  +K+ V    + L  E+ +  +RV  I 
Sbjct: 142 S-IAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIE 184

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} Length = 250

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 32/161 (19%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F++  AKV   D                   +    +V   + V  V      +  +LD 
Sbjct: 27  FVEAGAKVTGFDQAFT---------QEQYPFATEVMDVADAAQVAQVCQRLLAETERLDA 77

Query: 60  MFNNAGIISN--MDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLAT 103
           + N AGI+     D+ +   D ++   V +   F               G ++  A+ A 
Sbjct: 78  LVNAAGILRMGATDQLS-KEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAA 136

Query: 104 ET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            T  IG +   Y  SK A+  L  ++ +EL    +R N ++
Sbjct: 137 HTPRIGMS--AYGASKAALKSLALSVGLELAGSGVRCNVVS 175

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} Length = 260

 Score = 54.1 bits (131), Expect = 2e-09
 Identities = 21/159 (13%), Positives = 56/159 (35%), Gaps = 27/159 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT-KFGKLDIMFN 62
           A++++     +   A      S      +  V  ++    D+  +F+     G  DI+  
Sbjct: 32  ARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGADILVY 91

Query: 63  NAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLAT 103
           + G         +       D ++  R++                    G +++  ++  
Sbjct: 92  STGGPRPGRFMELG----VEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTL 147

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               + L    + +  V+G+++ L +EL  + + VN++ 
Sbjct: 148 LRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVL 186

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} Length = 202

 Score = 53.0 bits (128), Expect = 3e-09
 Identities = 20/123 (16%), Positives = 44/123 (35%), Gaps = 20/123 (16%)

Query: 35  VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMVVF 91
           V  ++T    +K +++  + GK+D + +  G  +       +   EK    +   +    
Sbjct: 39  VTVDITNIDSIKKMYE--QVGKVDAIVSATGSAT--FSPLTELTPEKNAVTISSKLGGQI 94

Query: 92  L------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN 139
                        G    T  +  E          M+  AV    K+  +E+ +  IR+N
Sbjct: 95  NLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPR-GIRIN 153

Query: 140 SIA 142
           +++
Sbjct: 154 TVS 156

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} Length = 272

 Score = 53.4 bits (129), Expect = 4e-09
 Identities = 30/163 (18%), Positives = 57/163 (34%), Gaps = 25/163 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +    +++   +++  +AL  E  +   +  +  +V   + +    D    +F  L  
Sbjct: 41  FAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRG 100

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA----------------NLAT 103
           + NNAG+    D      D +     M+     G+L  T                 NL +
Sbjct: 101 LINNAGLALGTDPAQ-SCDLDDWDT-MVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGS 158

Query: 104 ETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
              G+  Y     Y  +K  V     NL  +L    +RV ++ 
Sbjct: 159 -VAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLE 200

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 Length = 279

 Score = 53.0 bits (128), Expect = 5e-09
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 34/171 (19%)

Query: 2   FIQHRAKVIIA----DVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FG 55
            +Q   KV+         ++L            LI    C+++ + D+ ++F   +    
Sbjct: 52  LVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI-PYRCDLSNEEDILSMFSAIRSQHS 110

Query: 56  KLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------NLATETI 106
            +DI  NNAG+       TL + +    + M  V  L + + T          N+    I
Sbjct: 111 GVDICINNAGL---ARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHI 167

Query: 107 -------GEALYD------YLMSKYAVLGLMKNLCVELGQYD--IRVNSIA 142
                  G  +        Y  +KYAV  L + L  EL +    IR   I+
Sbjct: 168 ININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCIS 218

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 Length = 328

 Score = 52.8 bits (127), Expect = 8e-09
 Identities = 26/174 (14%), Positives = 48/174 (27%), Gaps = 45/174 (25%)

Query: 6   RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
            A  + AD+ +           +    +     VT+ +    +       +G+ D++ NN
Sbjct: 98  SAITVQADLSN--------VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNN 149

Query: 64  AGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL------GVLLFTANLATETIGEALYD 112
           A       +   D    +      + +      L               A    G     
Sbjct: 150 ASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 209

Query: 113 ------------------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                                   Y M+K A+ GL ++  +EL    IRVN + 
Sbjct: 210 RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG 263

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* Length = 259

 Score = 51.6 bits (124), Expect = 1e-08
 Identities = 20/165 (12%), Positives = 54/165 (32%), Gaps = 31/165 (18%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFTK------FGKL 57
           + ++++   + + R L +E  + +    +     ++  ++ V+ +    +        + 
Sbjct: 34  SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQR 93

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYD----- 112
            ++ NNA  + ++ +  L+ ++         +    +L  T+                  
Sbjct: 94  LLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN 153

Query: 113 ---------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                          Y   K A   L + L  E  +  +RV S A
Sbjct: 154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYA 196

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... Length = 288

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 46/179 (25%)

Query: 7   AKVII-----ADVQDDLCRALCKEFDSDELISYVCCNVT----IDSDVKNVFDFT--KFG 55
            +V+I     A+    L   L KE  +  ++     ++T    + +  + + +     FG
Sbjct: 48  YRVVIHYHNSAEAAVSLADELNKERSNTAVV--CQADLTNSNVLPASCEEIINSCFRAFG 105

Query: 56  KLDIMFNNAGI--------ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIG 107
           + D++ NNA            + D +   T   +V  + I    +   L T + A    G
Sbjct: 106 RCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAEL-IGTNAIAPFLLTMSFAQRQKG 164

Query: 108 EALY------------------------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                                        Y M K+A++GL ++  +EL  Y IRVN +A
Sbjct: 165 TNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVA 223

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 52.0 bits (125), Expect = 2e-08
 Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 35/115 (30%)

Query: 53  KFGKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------G 93
            FG + ++ NNAGI     +  M     + D + V  V +   F               G
Sbjct: 88  NFGTVHVIINNAGILRDASMKKMT----EKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYG 143

Query: 94  VLLFTANLATETIGEALY------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            ++ T++ A       LY      +Y  +K A+LG  + L  E  +Y+I+ N+IA
Sbjct: 144 RIVNTSSPA------GLYGNFGQANYASAKSALLGFAETLAKEGAKYNIKANAIA 192

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} Length = 604

 Score = 51.2 bits (123), Expect = 3e-08
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 35/115 (30%)

Query: 53  KFGKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------G 93
           K+G +DI+ NNAGI      + M       + + V++V ++  F               G
Sbjct: 392 KYGTIDILVNNAGILRDRSFAKMS----KQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFG 447

Query: 94  VLLFTANLATETIGEALY------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            ++   + +       +Y      +Y  SK  +LGL K + +E  + +I+VN +A
Sbjct: 448 RIINITSTS------GIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVA 496

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} Length = 280

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 28/167 (16%), Positives = 52/167 (31%), Gaps = 38/167 (22%)

Query: 7   AKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
             + I  + D +    +  E       + ++  ++   S  +   D    +FG++D + N
Sbjct: 54  FDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVN 113

Query: 63  NAGIISNMDRTTLDTDNEKVKRVM----------------IMVVFLG-----------VL 95
           NAGI S +    LD   E    ++                 M+               V 
Sbjct: 114 NAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS 173

Query: 96  LFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
               +           DY MSK  +    + L + L +  I V  + 
Sbjct: 174 AVMTS-----PERL--DYCMSKAGLAAFSQGLALRLAETGIAVFEVR 213

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} Length = 207

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 14/131 (10%), Positives = 42/131 (32%), Gaps = 17/131 (12%)

Query: 34  YVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL- 92
            +  ++  + + K + +  + G LD++ +  G       +  +   + V+ ++   +   
Sbjct: 46  ALPADLADELEAKALLE--EAGPLDLLVHAVGK--AGRASVREAGRDLVEEMLAAHLLTA 101

Query: 93  ------------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS 140
                          +F               Y  +K A+   ++    EL +  + +  
Sbjct: 102 AFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVL 161

Query: 141 IAHIVSATPFF 151
           +     AT  +
Sbjct: 162 VRLPAVATGLW 172

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} Length = 260

 Score = 50.6 bits (122), Expect = 3e-08
 Identities = 17/127 (13%), Positives = 39/127 (30%), Gaps = 23/127 (18%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM---IMV 89
           +  + + ++ +    D    +   L  + +NA         T   + +   R+    ++ 
Sbjct: 76  LYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASE---WLAETPGEEADNFTRMFSVHMLA 132

Query: 90  VFLGVLLFTANLATE-------------TIGEALY-DYLMSKYAVLGLMKNLCVELGQYD 135
            +L  L     L                  G + +  Y  +K  +  L  +         
Sbjct: 133 PYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-L 191

Query: 136 IRVNSIA 142
           ++VN IA
Sbjct: 192 VKVNGIA 198

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} Length = 262

 Score = 50.6 bits (122), Expect = 4e-08
 Identities = 33/174 (18%), Positives = 56/174 (32%), Gaps = 44/174 (25%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELIS--YVCCNVTIDSDVKNVFDFT--KFGK 56
           VF +  A V +A        A   + D         V  +V+  +    +      +FG 
Sbjct: 29  VFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88

Query: 57  LDIMFNNAGI-----ISNMDR----TTLDTDNEK--------VKRVMIM----------- 88
           +D++  NAG+     ++ M            N              +I            
Sbjct: 89  IDVVCANAGVFPDAPLATMTPEQLNGIFAV-NVNGTFYAVQACLDALIASGSGRVVLTSS 147

Query: 89  VVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +   G +  T        G +   Y  +K A LG M+   +EL  + I VN+I 
Sbjct: 148 IT--GPI--TGY-----PGWS--HYGATKAAQLGFMRTAAIELAPHKITVNAIM 190

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* Length = 291

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 26/174 (14%), Positives = 50/174 (28%), Gaps = 45/174 (25%)

Query: 6   RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
            A  + AD+ +           +    +     VT+ +    +       +G+ D++ NN
Sbjct: 61  SAITVQADLSN--------VATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNN 112

Query: 64  AGI-----ISNMDRTTLDTDNEKVKRVMIMV--VF----LGVLLFTANLATETIGEALYD 112
           A       +   D    +      + +      +F    +         A    G     
Sbjct: 113 ASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKH 172

Query: 113 ------------------------YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                                   Y M+K A+ GL ++  +EL    IRVN + 
Sbjct: 173 RGTNYSIINMVDAMTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVG 226

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* Length = 247

 Score = 49.8 bits (120), Expect = 6e-08
 Identities = 34/160 (21%), Positives = 61/160 (38%), Gaps = 32/160 (20%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNNA 64
           A VI++D+  +  +A             +  +++    VK +F       G +DI+ NNA
Sbjct: 31  ATVIVSDINAEGAKAAAASIGKKARA--IAADISDPGSVKALFAEIQALTGGIDILVNNA 88

Query: 65  GI-----ISNMDR----TTLDTDNEK--------VKRVMIMVVFLGVLLFTANLA----- 102
            I       ++D       +D  N              M      G ++   ++A     
Sbjct: 89  SIVPFVAWDDVDLDHWRKIIDV-NLTGTFIVTRAGTDQMRAAGKAGRVI---SIASNTFF 144

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             T   A   Y+ +K  V+G  + L  ELG+Y+I  N++ 
Sbjct: 145 AGTPNMA--AYVAAKGGVIGFTRALATELGKYNITANAVT 182

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* Length = 319

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 35/115 (30%)

Query: 53  KFGKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------G 93
            FG++D++ NNAGI      S +     D D + ++RV +   F               G
Sbjct: 89  TFGRIDVVVNNAGILRDRSFSRIS----DEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG 144

Query: 94  VLLFTANLATETIGEALY------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            ++ TA+ +       +Y      +Y  +K  +LGL   L +E  + +I  N+IA
Sbjct: 145 RIIMTASAS------GIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIA 193

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} Length = 287

 Score = 50.0 bits (120), Expect = 6e-08
 Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 29/161 (18%)

Query: 7   AKVIIA----DVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIM 60
            K+I+A    +  ++L + + +EF + ++      ++T    +K   +    +F  +DI+
Sbjct: 61  MKLILAARRLEKLEELKKTIDQEFPNAKVH-VAQLDITQAEKIKPFIENLPQEFKDIDIL 119

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLATET 105
            NNAG     D        E ++  +       ++  T                NL +  
Sbjct: 120 VNNAGKALGSD-RVGQIATEDIQD-VFDTNVTALINITQAVLPIFQAKNSGDIVNLGS-I 176

Query: 106 IGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            G   Y     Y  SK+AV     +L  EL    IRV  IA
Sbjct: 177 AGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIA 217

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} Length = 613

 Score = 50.2 bits (120), Expect = 6e-08
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 27/111 (24%)

Query: 53  KFGKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFL--------------G 93
            FG++DI+ NNAGI     +        + D   V  V +   F               G
Sbjct: 99  AFGRVDILVNNAGILRDRSLVKTS----EQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYG 154

Query: 94  VLLFTANLATE--TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
            ++ T++ +      G+   +Y  +K  ++GL   + +E  + ++  N I 
Sbjct: 155 RIIMTSSNSGIYGNFGQV--NYTAAKMGLIGLANTVAIEGARNNVLCNVIV 203

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} Length = 322

 Score = 50.1 bits (120), Expect = 7e-08
 Identities = 30/141 (21%), Positives = 49/141 (34%), Gaps = 43/141 (30%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGI-----ISNMDRTTLDTDNEKVKRVMI 87
              NV        +       FG LD++ NNAGI     I+N      + + + V  V +
Sbjct: 91  DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTS----EEEFDAVIAVHL 146

Query: 88  MVVFL--------------------GVLLFTANLATETIGEALY------DYLMSKYAVL 121
              F                     G ++ T++ A       L       +Y  +K  + 
Sbjct: 147 KGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGA------GLQGSVGQGNYSAAKAGIA 200

Query: 122 GLMKNLCVELGQYDIRVNSIA 142
            L      E+G+Y + VN+IA
Sbjct: 201 TLTLVGAAEMGRYGVTVNAIA 221

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} Length = 266

 Score = 49.1 bits (118), Expect = 1e-07
 Identities = 29/164 (17%), Positives = 62/164 (37%), Gaps = 34/164 (20%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +    +++   + +  +AL     +         +VT               +G  D 
Sbjct: 36  FSEEGHPLLLLARRVERLKAL-----NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADA 90

Query: 60  MFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLA 102
           + NNAG+  +  +D    + + ++    M  V  LG+L                   N++
Sbjct: 91  IVNNAGMMLLGQIDTQEAN-EWQR----MFDVNVLGLLNGMQAVLAPMKARNCGTIINIS 145

Query: 103 TETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +   G+  +     Y  +K+AV  + +N+  E+   ++RV +IA
Sbjct: 146 S-IAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTIA 188

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} Length = 264

 Score = 48.7 bits (117), Expect = 2e-07
 Identities = 38/202 (18%), Positives = 65/202 (32%), Gaps = 34/202 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
                AK+++   +     A+  E             +VT    V          +G++D
Sbjct: 24  LGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLAT 103
           ++ NNAG+   M  + L          MI V   GVL                   N+ +
Sbjct: 84  VLVNNAGV---MPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGS 140

Query: 104 ETIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
                ++      Y  +K+AV  +   L  E    +IRV  +   V  +     A  I  
Sbjct: 141 -IGALSVVPTAAVYCATKFAVRAISDGLRQE--STNIRVTCVNPGVVESEL---AGTITH 194

Query: 160 KTFKELLYASANLKGVVLKAAD 181
           +       A    + + L+ AD
Sbjct: 195 EETMA---AMDTYRAIALQPAD 213

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* Length = 276

 Score = 48.8 bits (117), Expect = 2e-07
 Identities = 27/147 (18%), Positives = 52/147 (35%), Gaps = 41/147 (27%)

Query: 35  VCCNVTIDSDV----KNVFDFT--KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIM 88
              ++++ S +    +++ D +   FG+ D++ NNA          L  D+         
Sbjct: 67  CKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASA--YYPTPLLPGDDTNGAADAKP 124

Query: 89  V------VF----LGVLLFTA--------------------NLAT--ETIGEALY-DYLM 115
           +      +F    +  L                        NL      +    +  Y M
Sbjct: 125 IDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTM 184

Query: 116 SKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +K+A+ GL +   +EL    IRVN++A
Sbjct: 185 AKHALGGLTRAAALELAPRHIRVNAVA 211

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* Length = 248

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 26/162 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           FIQ   KVI    + +  + L  E   +  +     +V   + ++ +      ++  +DI
Sbjct: 20  FIQQGHKVIATGRRQERLQELKDELGDN--LYIAQLDVRNRAAIEEMLASLPAEWCNIDI 77

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA---------------NLATE 104
           + NNAG+   M+        E  +  MI     G++  T                N+ + 
Sbjct: 78  LVNNAGLALGMEPAH-KASVEDWET-MIDTNNKGLVYMTRAVLPGMVERNHGHIINIGS- 134

Query: 105 TIGEALYD----YLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           T G   Y     Y  +K  V     NL  +L    +RV  I 
Sbjct: 135 TAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE 176

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 Length = 245

 Score = 47.9 bits (115), Expect = 3e-07
 Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 48/171 (28%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A+++  D+++   R   +   +      V  +V   + V+  F       G+LD 
Sbjct: 25  FAKEGARLVACDIEEGPLREAAEAVGA----HPVVMDVADPASVERGFAEALAHLGRLDG 80

Query: 60  MFNNAGI-----ISNMDR----TTLDTDNEK--------VKRVMIM-----------VVF 91
           + + AGI        M        L   N              M              V+
Sbjct: 81  VVHYAGITRDNFHWKMPLEDWELVLRV-NLTGSFLVAKAASEAMREKNPGSIVLTASRVY 139

Query: 92  LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           LG      N     +G+A  +Y  S   V+GL + L +ELG++ IRVN++A
Sbjct: 140 LG------N-----LGQA--NYAASMAGVVGLTRTLALELGRWGIRVNTLA 177

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} Length = 255

 Score = 46.0 bits (110), Expect = 1e-06
 Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 27/132 (20%)

Query: 35  VCCNVTIDSDVKNVFD--------FTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM 86
           +  N+     V+ ++          T   K DI+ NNAGI         +T  +   R++
Sbjct: 62  IGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGP--GAFIEETTEQFFDRMV 119

Query: 87  IMVVFLGVLLFTANLA---------------TETIGEALY-DYLMSKYAVLGLMKNLCVE 130
             V                               I    +  Y M+K A+  +   L  +
Sbjct: 120 -SVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQ 178

Query: 131 LGQYDIRVNSIA 142
           LG   I VN+I 
Sbjct: 179 LGARGITVNAIL 190

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} Length = 279

 Score = 45.3 bits (108), Expect = 2e-06
 Identities = 34/159 (21%), Positives = 53/159 (33%), Gaps = 26/159 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
             V           A      +    +    C+VT   +V         +FG + I+ N+
Sbjct: 49  IAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNS 108

Query: 64  AGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT-ANLATETIGEALY----------- 111
           AG   N    T D D+     V +     GV   T   L    + EA +           
Sbjct: 109 AGR--NGGGETADLDDALWADV-LDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG 165

Query: 112 --------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                    Y  SK+ V+G  K++  EL +  I VN++ 
Sbjct: 166 KQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVC 204

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 Length = 267

 Score = 45.0 bits (107), Expect = 3e-06
 Identities = 22/139 (15%), Positives = 42/139 (30%), Gaps = 34/139 (24%)

Query: 35  VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV 94
           +      D  V ++   TK   L+++FNNAG I+          ++++   +     +  
Sbjct: 81  LRNFDAYDKLVADIEGVTKDQGLNVLFNNAG-IAPKSARITAVRSQELLDTL-QTNTVVP 138

Query: 95  LLFTANLA--------------------------------TETIGEALYDYLMSKYAVLG 122
           ++                                             +Y Y  SK A+  
Sbjct: 139 IMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNA 198

Query: 123 LMKNLCVELGQYDIRVNSI 141
             K+L V+L    I   S+
Sbjct: 199 ATKSLSVDLYPQRIMCVSL 217

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} Length = 230

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 19/136 (13%), Positives = 47/136 (34%), Gaps = 23/136 (16%)

Query: 34  YVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLG 93
           Y   ++    +V+ +F+         + ++AG          D +     + +I      
Sbjct: 51  YRARDLASHQEVEQLFEQL-DSIPSTVVHSAGSGYFGLLQEQDPEQI---QTLIENNLSS 106

Query: 94  VLLFTA--------------NLATETIGEALYD----YLMSKYAVLGLMKNLCVELGQYD 135
            +                   + + T  +        Y   K+AV GL++++ +EL    
Sbjct: 107 AINVLRELVKRYKDQPVNVVMIMS-TAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKP 165

Query: 136 IRVNSIAHIVSATPFF 151
           +++ ++     AT F+
Sbjct: 166 MKIIAVYPGGMATEFW 181

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* Length = 277

 Score = 44.9 bits (107), Expect = 3e-06
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 26/159 (16%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISY-VCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
            +V +    ++  R   KE     + +    C+V    +++ +      ++G +D++ NN
Sbjct: 47  LRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNN 106

Query: 64  AGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT-ANLATETIGEALY----------- 111
           AG        T +  +E    V +     GV   T   L    + E              
Sbjct: 107 AGR--PGGGATAELADELWLDV-VETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG 163

Query: 112 --------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                    Y  SK+ V+G  K L +EL +  I VN++ 
Sbjct: 164 KQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVC 202

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 Length = 250

 Score = 44.2 bits (105), Expect = 5e-06
 Identities = 24/143 (16%), Positives = 49/143 (34%), Gaps = 38/143 (26%)

Query: 35  VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGV 94
           V C+ ++D+ V  V +      L ++ NNAG++ +   T  + +   +   +  V    V
Sbjct: 60  VTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSYG-TNTEPNRAVIAEQL-DVNTTSV 117

Query: 95  LLFT------------------------------------ANLATETIGEALYDYLMSKY 118
           +L T                                     +  + +    +  Y MSK 
Sbjct: 118 VLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKA 177

Query: 119 AVLGLMKNLCVELGQYDIRVNSI 141
           A+    + L V+L   ++ V + 
Sbjct: 178 AINMFGRTLAVDLKDDNVLVVNF 200

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} Length = 293

 Score = 44.1 bits (105), Expect = 7e-06
 Identities = 34/174 (19%), Positives = 53/174 (30%), Gaps = 44/174 (25%)

Query: 1   VFIQHRAKVIIADVQDDLCRALCKEFDSDELIS--YVCCNVTIDSDVKNVFDFT--KFGK 56
           VF +  A V +A        ++  E       +   V  +V+      +        FG 
Sbjct: 60  VFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119

Query: 57  LDIMFNNA-----GIISNMDR----TTLDTDNEK--------VKRVMIM----------- 88
           LD++  NA       +  M        LD  N K            +             
Sbjct: 120 LDVVCANAGIFPEARLDTMTPEQLSEVLDV-NVKGTVYTVQACLAPLTASGRGRVILTSS 178

Query: 89  VVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           +   G +  T        G +   Y  SK A LG M+   +EL    + VN+I 
Sbjct: 179 IT--GPV--TGY-----PGWS--HYGASKAAQLGFMRTAAIELAPRGVTVNAIL 221

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} Length = 264

 Score = 43.3 bits (103), Expect = 1e-05
 Identities = 32/166 (19%), Positives = 57/166 (34%), Gaps = 37/166 (22%)

Query: 7   AKVIIADVQD-DLCRALCKEF-DSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFN 62
             V +    D      + + + D +E + +V  +VT   D+  + +     FGK+D + N
Sbjct: 32  YSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLIN 91

Query: 63  NAGIISNMDRTTLD-TDNE-----------------KVKRVM--------IMVVFLGVLL 96
           NAG      +  +D  ++E                  V  VM        I   F G   
Sbjct: 92  NAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADS 151

Query: 97  FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
                    I  +   +  +K  ++ L K +  E  +Y I  N + 
Sbjct: 152 APGW-----IYRS--AFAAAKVGLVSLTKTVAYEEAEYGITANMVC 190

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} Length = 249

 Score = 41.0 bits (97), Expect = 7e-05
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 2  FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
            +  +KVII+   ++  ++L      +   +   CN+    +  N+    K   LDI+ 
Sbjct: 34 LHKLGSKVIISGSNEEKLKSLGNALKDN--YTIEVCNLANKEECSNLIS--KTSNLDILV 89

Query: 62 NNAGI 66
           NAGI
Sbjct: 90 CNAGI 94

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 Length = 285

 Score = 41.0 bits (97), Expect = 7e-05
 Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +  + VI        C ++  E  S   E   Y   +V+   ++  V +    +   +
Sbjct: 64  LAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG-DVSKKEEISEVINKILTEHKNV 122

Query: 58  DIMFNNAGI 66
           DI+ NNAGI
Sbjct: 123 DILVNNAGI 131

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A Length = 266

 Score = 40.6 bits (96), Expect = 1e-04
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F    A V +   ++D  + +  +   D  +     N++    +K + +    +   +DI
Sbjct: 47  FHAQGAIVGLHGTREDKLKEIAADLGKD--VFVFSANLSDRKSIKQLAEVAEREMEGIDI 104

Query: 60  MFNNAGI 66
           + NNAGI
Sbjct: 105 LVNNAGI 111

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* Length = 276

 Score = 40.0 bits (94), Expect = 2e-04
 Identities = 15/72 (20%), Positives = 27/72 (37%), Gaps = 5/72 (6%)

Query: 32  ISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMV 89
             +   ++     ++ + DF   ++G LD++ NNAGI   +   T          V +  
Sbjct: 56  PRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQ---AEVTMKT 112

Query: 90  VFLGVLLFTANL 101
            F G       L
Sbjct: 113 NFFGTRDVCTEL 124

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} Length = 247

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 12/68 (17%), Positives = 21/68 (30%), Gaps = 3/68 (4%)

Query: 2  FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
               A V+                         +  N++    ++N F     +   +D
Sbjct: 25 LASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84

Query: 59 IMFNNAGI 66
          I+ NNAGI
Sbjct: 85 ILVNNAGI 92

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} Length = 270

 Score = 39.8 bits (94), Expect = 2e-04
 Identities = 16/68 (23%), Positives = 26/68 (38%), Gaps = 3/68 (4%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             +  A VI     +     +   F            NV   + V  + + T  +FG L+
Sbjct: 48  LARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALN 107

Query: 59  IMFNNAGI 66
           ++ NNAGI
Sbjct: 108 VLVNNAGI 115

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB: 3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E Length = 248

 Score = 39.4 bits (93), Expect = 2e-04
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 2  FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +  AKVI     +   +A+      +     +  NVT    ++ V      +FG +DI
Sbjct: 29 LAERGAKVIGTATSESGAQAISDYLGDNGKG--MALNVTNPESIEAVLKAITDEFGGVDI 86

Query: 60 MFNNAGI 66
          + NNAGI
Sbjct: 87 LVNNAGI 93

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} Length = 264

 Score = 39.5 bits (93), Expect = 3e-04
 Identities = 27/171 (15%), Positives = 55/171 (32%), Gaps = 43/171 (25%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISY--------VCCNVTIDSDVKNVFDFT--KFGK 56
           A V   D+     +   +                     +V+     + + +     F +
Sbjct: 32  ATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSR 91

Query: 57  -LDIMFNNAGI-----ISNMDR----TTLDTDNEK--------VKRVMIMVVFLG----- 93
              ++ + AGI     + +M        +   N K          + ++     G     
Sbjct: 92  PPSVVVSCAGITQDEFLLHMSEDDWDKVIAV-NLKGTFLVTQAAAQALVSNGCRGSIINI 150

Query: 94  --VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
             ++    N     +G+   +Y  SK  V+GL +    ELG++ IR NS+ 
Sbjct: 151 SSIVGKVGN-----VGQT--NYAASKAGVIGLTQTAARELGRHGIRCNSVL 194

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A Length = 247

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 39/136 (28%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTL-----DTDNEKV----- 82
           V  +VT    V   F       G ++++ +NAG+              +   EKV     
Sbjct: 58  VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLS----ADAFLMRMTEEKFEKVINANL 113

Query: 83  -------KRVM-IM-------VVFLG-VLLFTANLATETIGEALYDYLMSKYAVLGLMKN 126
                  +R    M       ++F+G V             +A  +Y  SK  V+G+ ++
Sbjct: 114 TGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI-----GNQA--NYAASKAGVIGMARS 166

Query: 127 LCVELGQYDIRVNSIA 142
           +  EL + ++  N +A
Sbjct: 167 IARELSKANVTANVVA 182

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} Length = 253

 Score = 38.7 bits (91), Expect = 4e-04
 Identities = 30/136 (22%), Positives = 52/136 (38%), Gaps = 39/136 (28%)

Query: 35  VCCNVTIDSDVKNVFDFT--KFGKLDIMFNNAGIISNMDRTTL-----DTDNEKV----- 82
           V C++T    V+  +       G ++++  NAG+     +  L     + D   V     
Sbjct: 64  VKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVT----KDQLLMRMSEEDFTSVVETNL 119

Query: 83  -------KRVM-IM-------VVFLG-VLLFTANLATETIGEALYDYLMSKYAVLGLMKN 126
                  KR    M       VV +  V+    +      G+A  +Y  SK  ++G  ++
Sbjct: 120 TGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGS-----AGQA--NYAASKAGLVGFARS 172

Query: 127 LCVELGQYDIRVNSIA 142
           L  ELG  +I  N +A
Sbjct: 173 LARELGSRNITFNVVA 188

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 38.7 bits (89), Expect = 7e-04
 Identities = 20/121 (16%), Positives = 37/121 (30%), Gaps = 37/121 (30%)

Query: 3   IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFN 62
            Q++ K I++  +D                         + D K+V D  K         
Sbjct: 14  HQYQYKDILSVFEDAFVD---------------------NFDCKDVQDMPK--------- 43

Query: 63  NAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEAL---YDYLMSKYA 119
              I+S  +   +    + V   + +   L  L     +  + + E L   Y +LMS   
Sbjct: 44  --SILSKEEIDHIIMSKDAVSGTLRLFWTL--LSKQEEMVQKFVEEVLRINYKFLMSPIK 99

Query: 120 V 120
            
Sbjct: 100 T 100

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	181
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	100.0
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	100.0
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	100.0
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	100.0
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	100.0
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	100.0
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	100.0
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	100.0
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	100.0
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	100.0
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	100.0
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	100.0
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	100.0
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	100.0
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	100.0
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	100.0
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	100.0
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	100.0
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	100.0
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	100.0
3imf_A	257	Short chain dehydrogenase; structural genomics, in	100.0
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	100.0
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	100.0
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	100.0
4dqx_A	277	Probable oxidoreductase protein; structural genomi	100.0
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	100.0
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	100.0
3rih_A	293	Short chain dehydrogenase or reductase; structural	100.0
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	100.0
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	100.0
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	100.0
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	100.0
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	100.0
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	100.0
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	100.0
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	100.0
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	100.0
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	100.0
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	99.98
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	99.98
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	99.98
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	99.98
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	99.98
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	99.98
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	99.98
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	99.98
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	99.98
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	99.98
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	99.98
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	99.97
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	99.97
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	99.97
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	99.97
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	99.97
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	99.97
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	99.97
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	99.97
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	99.97
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	99.97
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	99.97
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	99.97
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	99.97
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	99.97
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	99.97
3cxt_A	291	Dehydrogenase with different specificities; rossma	99.97
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	99.97
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	99.97
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	99.97
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	99.97
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	99.97
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	99.97
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	99.97
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	99.97
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	99.97
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	99.97
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	99.97
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	99.97
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	99.97
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	99.97
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	99.97
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	99.97
1spx_A	278	Short-chain reductase family member (5L265); paral	99.97
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	99.97
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.97
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	99.97
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	99.97
1xkq_A	280	Short-chain reductase family member (5D234); parra	99.97
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	99.97
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	99.97
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	99.97
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	99.97
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	99.97
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	99.97
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	99.97
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	99.97
1xhl_A	297	Short-chain dehydrogenase/reductase family member	99.97
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	99.97
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	99.97
4iiu_A	267	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	99.97
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	99.97
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	99.97
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	99.97
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	99.97
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	99.97
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	99.97
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	99.97
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	99.97
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	99.97
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	99.97
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	99.97
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	99.97
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	99.97
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	99.97
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	99.97
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	99.97
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	99.97
3gdg_A	267	Probable NADP-dependent mannitol dehydrogenase; ro	99.97
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	99.97
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	99.97
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	99.97
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	99.96
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	99.96
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	99.96
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	99.96
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	99.96
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	99.96
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	99.96
3zu3_A	405	Putative reductase YPO4104/Y4119/YP_4011; oxidored	99.96
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	99.96
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	99.96
3un1_A	260	Probable oxidoreductase; structural genomics, PSI-	99.96
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	99.96
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	99.96
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	99.96
3lt0_A	329	Enoyl-ACP reductase; triclosan, triclosan variant,	99.96
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	99.96
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	99.96
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	99.96
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	99.96
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	99.96
4e4y_A	244	Short chain dehydrogenase family protein; structur	99.96
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	99.96
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	99.96
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	99.96
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	99.96
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	99.96
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	99.96
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	99.96
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	99.96
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	99.96
1xq1_A	266	Putative tropinone reducatse; structural genomics,	99.96
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	99.96
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	99.96
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	99.96
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	99.96
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	99.96
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	99.96
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	99.96
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	99.96
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	99.96
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	99.96
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	99.96
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	99.96
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	99.96
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	99.96
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	99.96
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	99.96
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	99.95
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	99.95
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	99.95
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	99.95
3u0b_A	454	Oxidoreductase, short chain dehydrogenase/reducta	99.95
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	99.95
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	99.95
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	99.95
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	99.95
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	99.95
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	99.95
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	99.95
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	99.95
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	99.95
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	99.95
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	99.95
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	99.94
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	99.94
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	99.94
2o2s_A	315	Enoyl-acyl carrier reductase; enoyl reductase, tri	99.94
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	99.94
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	99.94
1jtv_A	327	17 beta-hydroxysteroid dehydrogenase type 1; stero	99.94
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	99.94
1d7o_A	297	Enoyl-[acyl-carrier protein] reductase (NADH) PRE;	99.94
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	99.93
2ptg_A	319	Enoyl-acyl carrier reductase; apicomplexa, enoyl (	99.93
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	99.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.93
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	99.93
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	99.93
1uay_A	242	Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid	99.93
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	99.93
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	99.93
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	99.92
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	99.92
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	99.92
2yut_A	207	Putative short-chain oxidoreductase; alpha and bet	99.92
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	99.91
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	99.91
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	99.89
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	99.88
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	99.88
3qp9_A	525	Type I polyketide synthase pikaii; rossmann fold,	99.87
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	99.87
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	99.87
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	99.86
3mje_A	496	AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.	99.85
2fr1_A	486	Erythromycin synthase, eryai; short chain dehydrog	99.8
2z5l_A	511	Tylkr1, tylactone synthase starter module and modu	99.79
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	99.78
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	99.77
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	99.7
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	99.63
1orr_A	347	CDP-tyvelose-2-epimerase; rossmann fold, short-cha	99.62
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.62
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	99.61
1rkx_A	357	CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD;	99.59
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	99.58
4ggo_A	401	Trans-2-enoyl-COA reductase; rossmann fold, oxidor	99.58
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	99.58
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	99.57
2pk3_A	321	GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor	99.56
1i24_A	404	Sulfolipid biosynthesis protein SQD1; SDR, short-c	99.56
1gy8_A	397	UDP-galactose 4-epimerase; oxidoreductase; HET: NA	99.55
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	99.53
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	99.53
2z1m_A	345	GDP-D-mannose dehydratase; short-chain dehydrogena	99.52
2hun_A	336	336AA long hypothetical DTDP-glucose 4,6-dehydrat;	99.52
1kew_A	361	RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo	99.51
2p5y_A	311	UDP-glucose 4-epimerase; TTHA0591, structural geno	99.5
1xq6_A	253	Unknown protein; structural genomics, protein stru	99.5
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	99.49
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	99.49
3ay3_A	267	NAD-dependent epimerase/dehydratase; glucuronic ac	99.49
2c29_D	337	Dihydroflavonol 4-reductase; flavonoids, short deh	99.48
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	99.48
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	99.47
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	99.47
3ko8_A	312	NAD-dependent epimerase/dehydratase; isomerase, UD	99.47
2c20_A	330	UDP-glucose 4-epimerase; carbohydrate metabolism,	99.47
1ek6_A	348	UDP-galactose 4-epimerase; short-chain dehydrogena	99.46
1oc2_A	348	DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos	99.46
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	99.45
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	99.44
1r6d_A	337	TDP-glucose-4,6-dehydratase; rossmann fold, short-	99.44
2c5a_A	379	GDP-mannose-3', 5'-epimerase; short chain dehydrat	99.44
3ehe_A	313	UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC,	99.42
4egb_A	346	DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce	99.42
1db3_A	372	GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya	99.4
1udb_A	338	Epimerase, UDP-galactose-4-epimerase; isomerase; H	99.4
2p4h_X	322	Vestitone reductase; NADPH-dependent reductase, is	99.4
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	99.4
1rpn_A	335	GDP-mannose 4,6-dehydratase; short-chain dehydroge	99.38
1t2a_A	375	GDP-mannose 4,6 dehydratase; structural genomics c	99.38
2bll_A	345	Protein YFBG; decarboxylase, short chain dehydroge	99.38
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	99.37
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	99.35
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	99.34
2rh8_A	338	Anthocyanidin reductase; flavonoids, rossmann fold	99.34
4f6c_A	427	AUSA reductase domain protein; thioester reductase	99.34
2yy7_A	312	L-threonine dehydrogenase; thermolabIle, flavobact	99.34
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	99.32
2hrz_A	342	AGR_C_4963P, nucleoside-diphosphate-sugar epimeras	99.32
1n7h_A	381	GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR,	99.31
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	99.3
2x6t_A	357	ADP-L-glycero-D-manno-heptose-6-epimerase; isomera	99.3
3ajr_A	317	NDP-sugar epimerase; L-threonine dehydrogenase, L-	99.29
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	99.28
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	99.28
2b69_A	343	UDP-glucuronate decarboxylase 1; UDP-glucoronic ac	99.26
2ydy_A	315	Methionine adenosyltransferase 2 subunit beta; oxi	99.26
1z45_A	699	GAL10 bifunctional protein; epimerase, mutarotase,	99.24
1z7e_A	660	Protein aRNA; rossmann fold, OB-like fold, hydrola	99.23
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	99.23
1eq2_A	310	ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin	99.22
1e6u_A	321	GDP-fucose synthetase; epimerase/reductase, SDR, R	99.19
1vl0_A	292	DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s	99.18
2a35_A	215	Hypothetical protein PA4017; alpha-beta-alpha sand	99.16
3gpi_A	286	NAD-dependent epimerase/dehydratase; structural ge	99.14
4dqv_A	478	Probable peptide synthetase NRP (peptide synthase;	99.12
1n2s_A	299	DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold	99.12
3sc6_A	287	DTDP-4-dehydrorhamnose reductase; RFBD, structural	99.11
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	99.09
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	99.07
4b8w_A	319	GDP-L-fucose synthase; oxidoreductase; HET: NAP GD	99.07
4f6l_B	508	AUSA reductase domain protein; thioester reductase	99.06
2ggs_A	273	273AA long hypothetical DTDP-4-dehydrorhamnose red	99.03
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	99.01
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	98.98
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	98.97
3vps_A	321	TUNA, NAD-dependent epimerase/dehydratase; tunicam	98.95
3st7_A	369	Capsular polysaccharide synthesis enzyme CAP5F; ro	98.83
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	98.79
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	98.76
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	98.74
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	98.66
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	98.58
1qyc_A	308	Phenylcoumaran benzylic ether reductase PT1; NADPH	98.55
3gxh_A	157	Putative phosphatase (DUF442); YP_001181608.1, str	98.53
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	98.47
2v6g_A	364	Progesterone 5-beta-reductase; tyrosine-dependent	98.43
3oh8_A	516	Nucleoside-diphosphate sugar epimerase (SULA FAMI;	98.24
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	98.12
1y7t_A	327	Malate dehydrogenase; NAD-dependent-MDH-NADPH comp	97.68
4b4o_A	298	Epimerase family protein SDR39U1; isomerase; HET:	97.37
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	97.28
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	97.11
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.0
1u7z_A	226	Coenzyme A biosynthesis bifunctional protein coabc	96.05
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	96.04
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	95.73
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	95.52
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	94.98
2o7s_A	523	DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat	94.86
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	94.77
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	94.77
2gk4_A	232	Conserved hypothetical protein; alpha-beta-alpha s	94.65
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	94.56
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	94.18
1id1_A	153	Putative potassium channel protein; RCK domain, E.	94.07
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	94.03
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	93.8
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	93.42
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	93.41
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	93.38
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	93.35
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	93.19
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	93.15
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	93.08
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	92.7
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	92.69
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	92.46
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	92.38
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	92.03
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	91.9
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	90.46
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	89.83
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	89.09
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	88.84
3c85_A	183	Putative glutathione-regulated potassium-efflux S	88.68
1b8p_A	329	Protein (malate dehydrogenase); oxidoreductase; 1.	88.66
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	88.57
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	88.31
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	87.97
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	87.21
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	87.14
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	86.85
3gms_A	340	Putative NADPH:quinone reductase; structural genom	86.84
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	86.74
1wg8_A	285	Predicted S-adenosylmethionine-dependent methyltra	86.44
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	86.17
4g65_A	461	TRK system potassium uptake protein TRKA; structur	85.82
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	85.57
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	85.43
4eye_A	342	Probable oxidoreductase; structural genomics, niai	84.63
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	84.19
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	83.62
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	82.58
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	82.17
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	81.28

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=100.00  E-value=1.2e-41  Score=251.79  Aligned_cols=176  Identities=18%  Similarity=0.173  Sum_probs=162.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+++.+++..+++... .++.++.||++|++++++++++  .+||+||++|||||+...  .++.++
T Consensus        28 ~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~--~~~~~~  105 (255)
T 4g81_D           28 GLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHVDILINNAGIQYR--KPMVEL  105 (255)
T ss_dssp             HHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCC--CChhhC
Confidence            37899999999999999999888887654 6899999999999999999999  889999999999999877  899999


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|++++++|+.                  +|+||++||.++..+.+....|++||+++.+|+|+|+.|++++|||||
T Consensus       106 ~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN  185 (255)
T 4g81_D          106 ELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAARPTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTN  185 (255)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            99999999999998                  589999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+|+|++.....+ +++..+.+.+..  |++|+++|||
T Consensus       186 ~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~--Pl~R~g~ped  224 (255)
T 4g81_D          186 AIGPGYILTDMNTALIE-DKQFDSWVKSST--PSQRWGRPEE  224 (255)
T ss_dssp             EEEECSBCCGGGHHHHT-CHHHHHHHHHHS--TTCSCBCGGG
T ss_pred             EEeeCCCCCchhhcccC-CHHHHHHHHhCC--CCCCCcCHHH
Confidence            99999999999888765 566666677777  9999999987

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=100.00  E-value=2.8e-41  Score=249.71  Aligned_cols=179  Identities=20%  Similarity=0.285  Sum_probs=160.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+++.++++.+++.+. .++.++.+|++|++++++++++  .+||+||+||||||+.... .++.++
T Consensus        26 ~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVNNAGi~~~~-~~~~~~  104 (254)
T 4fn4_A           26 KFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGV-TPVAEV  104 (254)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCTT-CCGGGC
T ss_pred             HHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCC-CChhhC
Confidence            37899999999999999999998888654 6899999999999999999999  8899999999999986542 678899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++++++|+.                 +|+||++||.++..+.++...|++||+++.+|+|+|+.|++++|||||+
T Consensus       105 ~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~  184 (254)
T 4fn4_A          105 SDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVA  184 (254)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCSSSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            99999999999999                 7899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+|+|+|.......++...+...... +|++|+++|||
T Consensus       185 V~PG~i~T~~~~~~~~~~~~~~~~~~~~~-~~~~R~g~ped  224 (254)
T 4fn4_A          185 VLPGTVKTNIGLGSSKPSELGMRTLTKLM-SLSSRLAEPED  224 (254)
T ss_dssp             EEECSBCSSCTTSCSSCCHHHHHHHHHHH-TTCCCCBCHHH
T ss_pred             EEeCCCCCcccccccCCcHHHHHHHHhcC-CCCCCCcCHHH
Confidence            99999999998777665655566655553 38899999986

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=100.00  E-value=3.1e-40  Score=246.36  Aligned_cols=175  Identities=21%  Similarity=0.211  Sum_probs=152.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++..+.+|++|++++++++++  .+||+||+||||||....  .++.+++
T Consensus        48 ~la~~Ga~V~i~~r~~~~l~~~~~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVNNAG~~~~--~~~~~~~  123 (273)
T 4fgs_A           48 RFVAEGARVFITGRRKDVLDAAIAEIGG--GAVGIQADSANLAELDRLYEKVKAEAGRIDVLFVNAGGGSM--LPLGEVT  123 (273)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCT--TCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCC--CCTTSCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHcCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhcc
Confidence            3789999999999999999999999876  788999999999999999999  889999999999999776  8999999


Q ss_pred             HHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           79 NEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        79 ~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      .++|++++++|+.               .|+||+++|.++..+.+....|+++|+++.+|+|+|+.|++++|||||+|+|
T Consensus       124 ~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~P  203 (273)
T 4fgs_A          124 EEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGTPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSP  203 (273)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence            9999999999999               7899999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHH----HHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKT----FKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+|++...+...++..    .+.+.+.+  |++|+++|||
T Consensus       204 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~~--PlgR~g~pee  243 (273)
T 4fgs_A          204 GPTETTGLVELAGKDPVQQQGLLNALAAQV--PMGRVGRAEE  243 (273)
T ss_dssp             CSBCC---------CHHHHHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             CCCCChhHHHhhccCchhhHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999887776554433    34445555  9999999986

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=100.00  E-value=1.1e-39  Score=239.01  Aligned_cols=167  Identities=23%  Similarity=0.241  Sum_probs=145.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.+.+++.   ..  .++..+.+|++|+++++++++  +++++|+||||||+.    .++.+++.+
T Consensus        30 ~la~~Ga~Vv~~~~~~~~~~~~---~~--~~~~~~~~Dv~~~~~v~~~~~--~~g~iDiLVNNAGi~----~~~~~~~~~   98 (242)
T 4b79_A           30 QFAELGAEVVALGLDADGVHAP---RH--PRIRREELDITDSQRLQRLFE--ALPRLDVLVNNAGIS----RDREEYDLA   98 (242)
T ss_dssp             HHHHTTCEEEEEESSTTSTTSC---CC--TTEEEEECCTTCHHHHHHHHH--HCSCCSEEEECCCCC----CGGGGGSHH
T ss_pred             HHHHCCCEEEEEeCCHHHHhhh---hc--CCeEEEEecCCCHHHHHHHHH--hcCCCCEEEECCCCC----CCcccCCHH
Confidence            3789999999999997755421   11  478999999999999999998  688999999999975    456788999


Q ss_pred             HHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           81 KVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        81 ~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      +|++++++|+.                +|+||++||..+..+.++...|++||+++.+|+|+|+.|++++|||||+|+||
T Consensus        99 ~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG  178 (242)
T 4b79_A           99 TFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGSADRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPG  178 (242)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeC
Confidence            99999999998                79999999999999999999999999999999999999999999999999999


Q ss_pred             cccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          145 VSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       145 ~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+|||...... +++..+.+.+..  |++|+++|||
T Consensus       179 ~i~T~m~~~~~~-~~~~~~~~~~~~--PlgR~g~pee  212 (242)
T 4b79_A          179 WIDTPLGAGLKA-DVEATRRIMQRT--PLARWGEAPE  212 (242)
T ss_dssp             SBCCC-----CC-CHHHHHHHHHTC--TTCSCBCHHH
T ss_pred             CCCChhhhcccC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999877654 677888888887  9999999986

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=100.00  E-value=1.9e-39  Score=238.21  Aligned_cols=171  Identities=23%  Similarity=0.143  Sum_probs=149.5

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|++++|+.+ ...+.+++..  .++..+.||++|+++++++++   ++++|+||||||+...  .++.+++.
T Consensus        28 ~la~~Ga~Vvi~~r~~~~~~~~~~~~~g--~~~~~~~~Dv~d~~~v~~~~~---~g~iDiLVNNAGi~~~--~~~~~~~~  100 (247)
T 4hp8_A           28 GLAAAGAEVVCAARRAPDETLDIIAKDG--GNASALLIDFADPLAAKDSFT---DAGFDILVNNAGIIRR--ADSVEFSE  100 (247)
T ss_dssp             HHHHTTCEEEEEESSCCHHHHHHHHHTT--CCEEEEECCTTSTTTTTTSST---TTCCCEEEECCCCCCC--CCGGGCCH
T ss_pred             HHHHcCCEEEEEeCCcHHHHHHHHHHhC--CcEEEEEccCCCHHHHHHHHH---hCCCCEEEECCCCCCC--CCcccccH
Confidence            37899999999999853 2333333333  479999999999998877776   4889999999999877  89999999


Q ss_pred             HHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      ++|++++++|+.                  .|+||++||..+..+.+....|++||+++.+|+|+|+.|++++|||||+|
T Consensus       101 ~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV  180 (247)
T 4hp8_A          101 LDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGGIRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAI  180 (247)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            999999999999                  48999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+|+|++...... +++..+.+.+.+  |++|+++|||
T Consensus       181 ~PG~i~T~~~~~~~~-~~~~~~~~~~~~--PlgR~g~pee  217 (247)
T 4hp8_A          181 APGYIETNNTEALRA-DAARNKAILERI--PAGRWGHSED  217 (247)
T ss_dssp             EECSBCSGGGHHHHT-SHHHHHHHHTTC--TTSSCBCTHH
T ss_pred             eeCCCCCcchhhccc-CHHHHHHHHhCC--CCCCCcCHHH
Confidence            999999999887655 666777777777  9999999986

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=100.00  E-value=2.6e-38  Score=232.99  Aligned_cols=166  Identities=20%  Similarity=0.174  Sum_probs=148.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+++.+++..++..   ++.++.||++|++++++++++  .+||++|+||||||....  .++.+++
T Consensus        21 ~la~~Ga~V~~~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVNNAG~~~~--~~~~~~~   95 (247)
T 3ged_A           21 DFLEAGDKVCFIDIDEKRSADFAKERP---NLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVNNACRGSK--GILSSLL   95 (247)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHTTCT---TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CGGGTCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHhcC---CEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCC
Confidence            378999999999999988887766543   688999999999999999999  889999999999999877  8899999


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|++++++|+.                +|+||++||..+..+.+....|++||+++.+|+|+|+.|+++ |||||+|+
T Consensus        96 ~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~-~IrVN~I~  174 (247)
T 3ged_A           96 YEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSEPDSEAYASAKGGIVALTHALAMSLGP-DVLVNCIA  174 (247)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT-TSEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCEEEEEe
Confidence            9999999999999                789999999999999999999999999999999999999998 99999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+|++...       ..++..+.+  |++|+++|||
T Consensus       175 PG~i~t~~~~~-------~~~~~~~~~--Pl~R~g~ped  204 (247)
T 3ged_A          175 PGWINVTEQQE-------FTQEDCAAI--PAGKVGTPKD  204 (247)
T ss_dssp             ECSBCCCC----------CCHHHHHTS--TTSSCBCHHH
T ss_pred             cCcCCCCCcHH-------HHHHHHhcC--CCCCCcCHHH
Confidence            99999987533       334555666  9999999986

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=100.00  E-value=5.5e-38  Score=233.49  Aligned_cols=178  Identities=19%  Similarity=0.132  Sum_probs=155.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~   74 (181)
                      +|+++|++|++++|+++.++++.+.+...  .++.++.||+++++++++++++  .++|++|++|||||+....  ...+
T Consensus        27 ~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~  106 (256)
T 4fs3_A           27 VLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRF  106 (256)
T ss_dssp             HHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEecccccccccccccc
Confidence            37899999999999988777776665442  4789999999999999999999  7889999999999986431  1456


Q ss_pred             ccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           75 LDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.++|...+++|+.               +|+||++||.++..+.+++..|++||+++.+|+|+|+.|++++|||||
T Consensus       107 ~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN  186 (256)
T 4fs3_A          107 SETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGEFAVQNYNVMGVAKASLEANVKYLALDLGPDNIRVN  186 (256)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccccCcccchhhHHHHHHHHHHHHHHHHHhCccCeEEE
Confidence            67888999999999987               689999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.+.... .++..+++.+..  |++|+++|||
T Consensus       187 ~V~PG~i~T~~~~~~~~-~~~~~~~~~~~~--Pl~R~g~pee  225 (256)
T 4fs3_A          187 AISAGPIRTLSAKGVGG-FNTILKEIKERA--PLKRNVDQVE  225 (256)
T ss_dssp             EEEECCCCSGGGTTCTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EEecCCCCChhhhhccC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999876543 567777788887  9999999986

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=100.00  E-value=5.2e-38  Score=233.11  Aligned_cols=175  Identities=18%  Similarity=0.222  Sum_probs=144.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC-CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+..+.. +++.. ..++.++.||+++++++++++++  .+||++|++|||||+...   ...+.
T Consensus        26 ~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iDiLVNnAGi~~~---~~~~~  101 (258)
T 4gkb_A           26 RLAEERAIPVVFARHAPDGAFL-DALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLDGLVNNAGVNDG---IGLDA  101 (258)
T ss_dssp             HHHHTTCEEEEEESSCCCHHHH-HHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC---CCTTS
T ss_pred             HHHHcCCEEEEEECCcccHHHH-HHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC---CCccC
Confidence            3789999999999986544322 22211 14789999999999999999999  889999999999998653   34478


Q ss_pred             CHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.++|++.+++|+.                +|+||++||.++..+.+....|++||+++.+|+|+++.|++++|||||+|
T Consensus       102 ~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V  181 (258)
T 4gkb_A          102 GRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQGNTSGYCASKGAQLALTREWAVALREHGVRVNAV  181 (258)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCCCCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            99999999999998                79999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCC---ChHHHHHHHHHhhccc-ccccccCC
Q 042200          142 AHIVSATPFFCNAMGI---DKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      +||+|+|++.+.....   .++..+++....  |+ +|+++|||
T Consensus       182 ~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--plg~R~g~pee  223 (258)
T 4gkb_A          182 IPAEVMTPLYRNWIATFEDPEAKLAEIAAKV--PLGRRFTTPDE  223 (258)
T ss_dssp             EECSBCCSCC-----------CHHHHHHTTC--TTTTSCBCHHH
T ss_pred             ecCCCCChhHhhhhhcccChHHHHHHHHhcC--CCCCCCcCHHH
Confidence            9999999998775432   344556666666  77 59999986

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=100.00  E-value=1.1e-35  Score=221.12  Aligned_cols=172  Identities=15%  Similarity=0.128  Sum_probs=141.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.      .+   .+..++.+|+++.+++++++++  .+||++|++|||||.......++.+++
T Consensus        30 ~la~~Ga~V~~~~r~~~~------~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~  100 (261)
T 4h15_A           30 LFLELGAQVLTTARARPE------GL---PEELFVEADLTTKEGCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALS  100 (261)
T ss_dssp             HHHHTTCEEEEEESSCCT------TS---CTTTEEECCTTSHHHHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCC
T ss_pred             HHHHcCCEEEEEECCchh------CC---CcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCC
Confidence            378999999999997541      11   2345789999999999999999  889999999999998654226788999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCc-cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGE-ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~-~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|++.+++|+.                 +|+||++||..+..+.+ ....|++||+++.+|+|+|+.|++++|||||+
T Consensus       101 ~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~~~~~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~  180 (261)
T 4h15_A          101 DDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVLPLPESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVR  180 (261)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhccCCCCccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            9999999999998                 68999999999998876 57889999999999999999999999999999


Q ss_pred             EecCcccCcccchhcC-------CChHHHHHHHHHh--hcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMG-------IDKKTFKELLYAS--ANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~e  181 (181)
                      |+||+|+|++.....+       .+.+..++.....  ..|++|+++|||
T Consensus       181 V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~pee  230 (261)
T 4h15_A          181 VSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLGRPAKPEE  230 (261)
T ss_dssp             EEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTSSCBCHHH
T ss_pred             EeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCCCCcCHHH
Confidence            9999999998765432       1223333333221  129999999986

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=100.00  E-value=3.1e-34  Score=214.93  Aligned_cols=176  Identities=18%  Similarity=0.185  Sum_probs=157.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        45 ~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~  122 (271)
T 4ibo_A           45 GLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVDILVNNAGIQFR--KPMIEL  122 (271)
T ss_dssp             HHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC--CCchhC
Confidence            37899999999999999988887777443 5799999999999999999998  778899999999999876  788899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++|+.+++++||+||+
T Consensus       123 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  202 (271)
T 4ibo_A          123 ETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELARATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANA  202 (271)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEE
Confidence            99999999999998                 4799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       203 v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  240 (271)
T 4ibo_A          203 IGPGYMLTDMNQALID-NPEFDAWVKART--PAKRWGKPQE  240 (271)
T ss_dssp             EEECSBCSGGGHHHHH-CHHHHHHHHHHS--TTCSCBCGGG
T ss_pred             EEeccEeCcchhhccc-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999876644 456666666666  8899999986

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=100.00  E-value=4.3e-34  Score=211.60  Aligned_cols=172  Identities=19%  Similarity=0.235  Sum_probs=154.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ...++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~  103 (248)
T 3op4_A           28 LLAERGAKVIGTATSESGAQAISDYLGD--NGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITRD--NLLMRMK  103 (248)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhcc--cceEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCC
Confidence            3788999999999999999888887765  688999999999999999998  778999999999999877  7888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.+++..|++||+++++|+++++.|++++||+||+|
T Consensus       104 ~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v  183 (248)
T 3op4_A          104 EEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTV  183 (248)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.+..   .++..+......  |++|+++|+|
T Consensus       184 ~PG~v~T~~~~~~---~~~~~~~~~~~~--p~~r~~~p~d  218 (248)
T 3op4_A          184 APGFIETDMTKAL---NDEQRTATLAQV--PAGRLGDPRE  218 (248)
T ss_dssp             EECSBSSTTTTTS---CHHHHHHHHHTC--TTCSCBCHHH
T ss_pred             eeCCCCCchhhhc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999987654   345555556665  8899999875

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=100.00  E-value=8.8e-34  Score=211.05  Aligned_cols=176  Identities=19%  Similarity=0.193  Sum_probs=155.3

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++ +|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        23 ~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~  100 (258)
T 3oid_A           23 RLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRLDVFVNNAASGVL--RPVME  100 (258)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--SCGGG
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhh
Confidence            378899999987 88988888887776543 5799999999999999999998  778999999999998766  78889


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.+++..|++||+++++|+++++.+++++||+||
T Consensus       101 ~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  180 (258)
T 3oid_A          101 LEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRYLENYTTVGVSKAALEALTRYLAVELSPKQIIVN  180 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            999999999999997                 579999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       181 ~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~~~d  219 (258)
T 3oid_A          181 AVSGGAIDTDALKHFPN-REDLLEDARQNT--PAGRMVEIKD  219 (258)
T ss_dssp             EEEECCBCSGGGGGCTT-HHHHHHHHHHHC--TTSSCBCHHH
T ss_pred             EEeeCCCcChhhhhccc-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999876543 345566666666  8899999875

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=100.00  E-value=4.7e-34  Score=213.40  Aligned_cols=176  Identities=21%  Similarity=0.229  Sum_probs=155.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++..  ..++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        39 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~  116 (266)
T 4egf_A           39 AFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLDVLVNNAGISHP--QPVVD  116 (266)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCSEEEEECCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CChhh
Confidence            3788999999999999888887776643  14799999999999999999998  778999999999999877  78889


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                  .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+|
T Consensus       117 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~v  196 (266)
T 4egf_A          117 TDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAPLPDHYAYCTSKAGLVMATKVLARELGPHGIRA  196 (266)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccCCCCChHHHHHHHHHHHHHHHHHHHHhhhCeEE
Confidence            999999999999998                  36999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       197 n~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~p~d  236 (266)
T 4egf_A          197 NSVCPTVVLTEMGQRVWG-DEAKSAPMIARI--PLGRFAVPHE  236 (266)
T ss_dssp             EEEEESCBCSHHHHHHTC-SHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEEeCCCcCchhhhhcc-ChHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999999876654 455555666666  8899999875

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=100.00  E-value=1.3e-33  Score=210.93  Aligned_cols=179  Identities=16%  Similarity=0.171  Sum_probs=152.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++..+++..   ..++.++.+|++|.+++++++++  .+++++|+||||||....  .++.
T Consensus        27 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~  104 (265)
T 3lf2_A           27 LLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCASILVNNAGQGRV--STFA  104 (265)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCSEEEECCCCCCC--BCTT
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcc
Confidence            3788999999999999988887777643   13589999999999999999998  778999999999999776  7888


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.|++++||+|
T Consensus       105 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v  184 (265)
T 3lf2_A          105 ETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPEPHMVATSAARAGVKNLVRSMAFEFAPKGVRV  184 (265)
T ss_dssp             TCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCeEE
Confidence            9999999999999998                 58899999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCC------ChHHHHHHHHH-hhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGI------DKKTFKELLYA-SANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~-~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.......      ..+........ ...|++|+++|+|
T Consensus       185 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped  234 (265)
T 3lf2_A          185 NGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLGRLGKPIE  234 (265)
T ss_dssp             EEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTCSCBCHHH
T ss_pred             EEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcCCCcCHHH
Confidence            9999999999988765542      22233333333 1138999999975

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=100.00  E-value=7.9e-34  Score=211.08  Aligned_cols=174  Identities=24%  Similarity=0.315  Sum_probs=153.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++ +.
T Consensus        31 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~-~~  107 (256)
T 3gaf_A           31 TFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAGGGGP--KPF-DM  107 (256)
T ss_dssp             HHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCT-TC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCC-CC
Confidence            36789999999999998888877766433 5799999999999999999998  778999999999998876  666 88


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+
T Consensus       108 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~  187 (256)
T 3gaf_A          108 PMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNA  187 (256)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEE
Confidence            99999999999998                 5799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++.....  .++..+.+....  |++|+++|+|
T Consensus       188 v~PG~v~T~~~~~~~--~~~~~~~~~~~~--p~~r~~~~~d  224 (256)
T 3gaf_A          188 IAPGAIKTDALATVL--TPEIERAMLKHT--PLGRLGEAQD  224 (256)
T ss_dssp             EEECCBCCHHHHHHC--CHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEccccCchhhhcc--CHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999877654  445555555555  8899999875

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.4e-33  Score=210.32  Aligned_cols=174  Identities=20%  Similarity=0.226  Sum_probs=153.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+++++..+++...  .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        29 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~  106 (262)
T 3pk0_A           29 VFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGIDVVCANAGVFPD--APLAT  106 (262)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhh
Confidence            37889999999999999988887777543  4799999999999999999998  778999999999999876  78889


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                 .|+||++||..+. .+.+++..|++||+++++|+++++.+++++||+|
T Consensus       107 ~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v  186 (262)
T 3pk0_A          107 MTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITGYPGWSHYGATKAAQLGFMRTAAIELAPHKITV  186 (262)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCCCCChhhHHHHHHHHHHHHHHHHHHHhhCcEE
Confidence            999999999999998                 5799999999886 7888999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++....   .++..+.+.+..  |++|+++|+|
T Consensus       187 n~v~PG~v~t~~~~~~---~~~~~~~~~~~~--p~~r~~~p~d  224 (262)
T 3pk0_A          187 NAIMPGNIMTEGLLEN---GEEYIASMARSI--PAGALGTPED  224 (262)
T ss_dssp             EEEEECSBCCHHHHTT---CHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             EEEEeCcCcCcccccc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999976543   456666666666  8899999875

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=100.00  E-value=1.2e-33  Score=212.23  Aligned_cols=177  Identities=19%  Similarity=0.130  Sum_probs=155.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++...  .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        46 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~  123 (277)
T 4fc7_A           46 IFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRIDILINCAAGNFL--CPAGA  123 (277)
T ss_dssp             HHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCC--CCccc
Confidence            37899999999999998888777666321  4799999999999999999998  778999999999998766  78888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||
T Consensus       124 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  203 (277)
T 4fc7_A          124 LSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRGQALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVN  203 (277)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            999999999999998                 589999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++........++..+......  |++|+++|+|
T Consensus       204 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  243 (277)
T 4fc7_A          204 SLAPGPISGTEGLRRLGGPQASLSTKVTAS--PLQRLGNKTE  243 (277)
T ss_dssp             EEEECCBSSSHHHHHHSCCHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             EEEECCEecchhhhhccCCHHHHHHHhccC--CCCCCcCHHH
Confidence            999999999865444444556666666666  8999999975

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=100.00  E-value=1.4e-33  Score=212.10  Aligned_cols=177  Identities=18%  Similarity=0.176  Sum_probs=154.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        43 ~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~  120 (279)
T 3sju_A           43 TLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIGILVNSAGRNGG--GETADL  120 (279)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCC--SCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhC
Confidence            37889999999999999998888877554 5799999999999999999998  778999999999999876  788899


Q ss_pred             CHHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 DNEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.++|+..+++|+.                   .|+||++||..+..+.++...|++||+++++|+++++.+++++||+|
T Consensus       121 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v  200 (279)
T 3sju_A          121 DDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQGVMYAAPYTASKHGVVGFTKSVGFELAKTGITV  200 (279)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHHHhhCcEE
Confidence            99999999999998                   37999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcC--------CChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMG--------IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++......        ..++..+.+....  |++|+++|+|
T Consensus       201 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  249 (279)
T 3sju_A          201 NAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKI--PLGRYSTPEE  249 (279)
T ss_dssp             EEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999998766432        1234444455555  8899999875

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=100.00  E-value=6.6e-33  Score=206.39  Aligned_cols=175  Identities=22%  Similarity=0.205  Sum_probs=154.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        27 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~  102 (259)
T 4e6p_A           27 AYVREGATVAIADIDIERARQAAAEIGP--AAYAVQMDVTRQDSIDAAIAATVEHAGGLDILVNNAALFDL--APIVEIT  102 (259)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEEECCCCCCC--BCGGGCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--CceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCC
Confidence            3788999999999999999988888865  789999999999999999998  778999999999999876  7888999


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|++.+++|+.                  .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+
T Consensus       103 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~  182 (259)
T 4e6p_A          103 RESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGEALVAIYCATKAAVISLTQSAGLDLIKHRINVNA  182 (259)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEE
Confidence            9999999999998                  3699999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcC--------CChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMG--------IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++......        ..++..+.+....  |++|+++|+|
T Consensus       183 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~d  229 (259)
T 4e6p_A          183 IAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAV--PFGRMGTAED  229 (259)
T ss_dssp             EEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHS--TTSSCBCTHH
T ss_pred             EEECCCccchhhhhhhhhhhhccCChHHHHHHHhccC--CCCCCcCHHH
Confidence            9999999998765410        1334455555555  8899999975

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=100.00  E-value=2.9e-33  Score=207.96  Aligned_cols=174  Identities=18%  Similarity=0.132  Sum_probs=151.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        27 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~  102 (255)
T 4eso_A           27 RLVEGGAEVLLTGRNESNIARIREEFGP--RVHALRSDIADLNEIAVLGAAAGQTLGAIDLLHINAGVSEL--EPFDQVS  102 (255)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCC--BCGGGCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--cceEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCC
Confidence            3788999999999999999888887754  799999999999999999998  778999999999999876  7888999


Q ss_pred             HHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           79 NEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        79 ~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      .++|+..+++|+.               .|+||++||.++..+.+++..|++||+++++|+++++.|++++||+||+|+|
T Consensus       103 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~P  182 (255)
T 4eso_A          103 EASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGHPGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSP  182 (255)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBCTTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEec
Confidence            9999999999998               5799999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHH----HHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKT----FKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |++.|++...... .+..    .+......  |++|+++|+|
T Consensus       183 G~v~T~~~~~~~~-~~~~~~~~~~~~~~~~--p~~r~~~ped  221 (255)
T 4eso_A          183 GFIDTPTKGVAGI-TEAERAEFKTLGDNIT--PMKRNGTADE  221 (255)
T ss_dssp             CSBCCSSTTCTTS-CHHHHHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             CcccCcccccccC-ChhhHHHHHHHHhccC--CCCCCcCHHH
Confidence            9999998654211 2222    22233334  8899999975

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=100.00  E-value=1.2e-33  Score=210.18  Aligned_cols=177  Identities=23%  Similarity=0.231  Sum_probs=151.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~  102 (257)
T 3imf_A           25 RFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRIDILINNAAGNFI--CPAEDL  102 (257)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            37889999999999999999888888654 6899999999999999999998  778999999999998776  788899


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc-CCCeEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG-QYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~-~~~i~v  138 (181)
                      +.++|+..+++|+.                  .|+||++||..+..+.+++..|++||+++++|+++++.|++ ++||+|
T Consensus       103 ~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrv  182 (257)
T 3imf_A          103 SVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDAGPGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRV  182 (257)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhccccCeEE
Confidence            99999999999998                  47899999999999999999999999999999999999997 779999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||.+.|++........++..+.+....  |++|+++|+|
T Consensus       183 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  223 (257)
T 3imf_A          183 NAIAPGPIERTGGADKLWISEEMAKRTIQSV--PLGRLGTPEE  223 (257)
T ss_dssp             EEEEECCBSSCCCC-------CCSHHHHTTS--TTCSCBCHHH
T ss_pred             EEEEECCCcCCcchhhcccCHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999975443222334444455555  8899999875

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=100.00  E-value=1.7e-33  Score=210.14  Aligned_cols=178  Identities=19%  Similarity=0.232  Sum_probs=152.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||..... .++.+.
T Consensus        30 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~~  108 (264)
T 3ucx_A           30 RCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVDVVINNAFRVPSM-KPFANT  108 (264)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCSCCCC-CCGGGC
T ss_pred             HHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCC-CCchhC
Confidence            37889999999999999888887776443 5799999999999999999998  7789999999999986332 788889


Q ss_pred             CHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.++|+..+++|+.                +|+||++||..+..+.+++..|++||+++++|+++++.+++++||+||+|
T Consensus       109 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v  188 (264)
T 3ucx_A          109 TFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVVRHSQAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSV  188 (264)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGGGCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchhccCCCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence            99999999999998                57999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCC--------ChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGI--------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.......        .++..+.+....  |++|+++|+|
T Consensus       189 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  234 (264)
T 3ucx_A          189 LPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGS--DLKRLPTEDE  234 (264)
T ss_dssp             EESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS--SSSSCCBHHH
T ss_pred             ecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccC--CcccCCCHHH
Confidence            9999999987665321        123334444444  8899999875

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=100.00  E-value=4e-33  Score=209.79  Aligned_cols=178  Identities=22%  Similarity=0.259  Sum_probs=154.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++++++++  .+++++|+||||||..... .++.+.
T Consensus        27 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~-~~~~~~  105 (280)
T 3tox_A           27 LFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLDTAFNNAGALGAM-GEISSL  105 (280)
T ss_dssp             HHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSC-SCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CChhhC
Confidence            37889999999999999999888888654 6899999999999999999998  7789999999999986432 678889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                 .|+||++||..+. .+.++...|++||+++++|+++++.+++++||+||
T Consensus       106 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn  185 (280)
T 3tox_A          106 SVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAGFAGVAPYAASKAGLIGLVQALAVELGARGIRVN  185 (280)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEE
Confidence            99999999999998                 5799999999988 67888999999999999999999999999999999


Q ss_pred             EEecCcccCcccch-hcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCN-AMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++... .....++..+.+....  |++|+++|+|
T Consensus       186 ~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  226 (280)
T 3tox_A          186 ALLPGGTDTPANFANLPGAAPETRGFVEGLH--ALKRIARPEE  226 (280)
T ss_dssp             EEEECSBSSTTSGGGSTTCCTHHHHHHHTTS--TTSSCBCHHH
T ss_pred             EEEECCCCCchhhhhccccCHHHHHHHhccC--ccCCCcCHHH
Confidence            99999999998766 3333445555555555  8899999875

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=100.00  E-value=3.6e-33  Score=210.08  Aligned_cols=177  Identities=20%  Similarity=0.170  Sum_probs=155.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC----CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|+.+.+++..+++...    .++.++.+|++|.+++++++++  .+++++|+||||||..... .++
T Consensus        30 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~  108 (281)
T 3svt_A           30 GLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWHGRLHGVVHCAGGSENI-GPI  108 (281)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCG
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC-CCc
Confidence            37889999999999999888887777543    2789999999999999999998  7789999999999984332 678


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.+.++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+
T Consensus       109 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~  188 (281)
T 3svt_A          109 TQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTHRWFGAYGVTKSAVDHLMQLAADELGASWVR  188 (281)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTCTHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeE
Confidence            88999999999999998                 5799999999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       189 vn~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--p~~r~~~~~d  229 (281)
T 3svt_A          189 VNSIRPGLIRTDLVAAITE-SAELSSDYAMCT--PLPRQGEVED  229 (281)
T ss_dssp             EEEEEECSBCSGGGHHHHT-CHHHHHHHHHHC--SSSSCBCHHH
T ss_pred             EEEEEeCcCcCcchhhccc-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999999877644 556666666666  8899999875

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=100.00  E-value=1.8e-33  Score=210.25  Aligned_cols=172  Identities=16%  Similarity=0.218  Sum_probs=143.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+.+
T Consensus        46 ~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  121 (266)
T 3grp_A           46 CFHAQGAIVGLHGTREDKLKEIAADLGK--DVFVFSANLSDRKSIKQLAEVAEREMEGIDILVNNAGITRD--GLFVRMQ  121 (266)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCS--SEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEEECCCCC-------CCCH
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--ceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCC
Confidence            3788999999999999999888887765  799999999999999999998  778999999999998876  7788899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+|
T Consensus       122 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v  201 (266)
T 3grp_A          122 DQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVGNPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCI  201 (266)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCCCCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++....   .++..+.+....  |++|+++|+|
T Consensus       202 ~PG~v~t~~~~~~---~~~~~~~~~~~~--p~~r~~~~ed  236 (266)
T 3grp_A          202 APGFIKSAMTDKL---NEKQKEAIMAMI--PMKRMGIGEE  236 (266)
T ss_dssp             EECSBCSHHHHTC---CHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             eeCcCCCchhhcc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999987654   445555555555  8899999875

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=100.00  E-value=3.6e-33  Score=209.72  Aligned_cols=175  Identities=23%  Similarity=0.323  Sum_probs=151.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        46 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~  121 (277)
T 4dqx_A           46 LFAKNGAYVVVADVNEDAAVRVANEIGS--KAFGVRVDVSSAKDAESMVEKTTAKWGRVDVLVNNAGFGTT--GNVVTIP  121 (277)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTSC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCC
Confidence            3788999999999999999888887765  789999999999999999998  778999999999998776  7888899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+|
T Consensus       122 ~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v  201 (277)
T 4dqx_A          122 EETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSAIADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAV  201 (277)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcCCCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            9999999999998                 57999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCCh---HHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDK---KTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++........+   ...+.+....  |++|+++|+|
T Consensus       202 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~ped  242 (277)
T 4dqx_A          202 APGTIDSPYFTKIFAEAKDPAKLRSDFNARA--VMDRMGTAEE  242 (277)
T ss_dssp             EECSBCCHHHHHHHHTCSCHHHHHHHHHTTS--TTCSCBCHHH
T ss_pred             eeCcCcCchhhhhcccccchhHHHHHHHhcC--cccCCcCHHH
Confidence            999999998544332111   2222244444  8899999875

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=100.00  E-value=1.7e-33  Score=210.84  Aligned_cols=174  Identities=18%  Similarity=0.197  Sum_probs=152.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+.
T Consensus        47 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~  124 (270)
T 3ftp_A           47 ELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALNVLVNNAGITQD--QLAMRM  124 (270)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            37889999999999998888776665432 4688999999999999999998  778999999999998876  788889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.+++..|+++|+++++|+++++.+++++||+||+
T Consensus       125 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  204 (270)
T 3ftp_A          125 KDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAGNPGQVNYAAAKAGVAGMTRALAREIGSRGITVNC  204 (270)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEE
Confidence            99999999999998                 5899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++....   .++..+.+....  |++|+++|+|
T Consensus       205 v~PG~v~T~~~~~~---~~~~~~~~~~~~--p~~r~~~ped  240 (270)
T 3ftp_A          205 VAPGFIDTDMTKGL---PQEQQTALKTQI--PLGRLGSPED  240 (270)
T ss_dssp             EEECSBCSHHHHHS---CHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEeCCCcCcchhhc---CHHHHHHHHhcC--CCCCCCCHHH
Confidence            99999999987664   334445555555  8899999875

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=100.00  E-value=3.5e-33  Score=206.56  Aligned_cols=172  Identities=17%  Similarity=0.204  Sum_probs=151.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~  100 (247)
T 3rwb_A           25 RLAADGATVIVSDINAEGAKAAAASIGK--KARAIAADISDPGSVKALFAEIQALTGGIDILVNNASIVPF--VAWDDVD  100 (247)
T ss_dssp             HHHHTTCEEEEECSCHHHHHHHHHHHCT--TEEECCCCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC--CCcccCC
Confidence            3788999999999999999988888855  799999999999999999998  778999999999999876  7888999


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|++.+++|+.                  .|+||++||..+..+.+++..|+++|+++++|+++++.+++++||+||+
T Consensus       101 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~  180 (247)
T 3rwb_A          101 LDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAGTPNMAAYVAAKGGVIGFTRALATELGKYNITANA  180 (247)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHTCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            9999999999998                  3799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHH-hhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYA-SANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e  181 (181)
                      |+||++.|++.....+   +....+... .  |++|+++|+|
T Consensus       181 v~PG~v~t~~~~~~~~---~~~~~~~~~~~--~~~r~~~ped  217 (247)
T 3rwb_A          181 VTPGLIESDGVKASPH---NEAFGFVEMLQ--AMKGKGQPEH  217 (247)
T ss_dssp             EEECSBCCHHHHTSGG---GGGHHHHHHHS--SSCSCBCHHH
T ss_pred             EeeCcCcCccccccCh---hHHHHHHhccc--ccCCCcCHHH
Confidence            9999999998765432   222333333 4  8899999875

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=100.00  E-value=4.2e-33  Score=210.86  Aligned_cols=174  Identities=21%  Similarity=0.212  Sum_probs=154.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++...  .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        60 ~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~  137 (293)
T 3rih_A           60 VFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALDVVCANAGIFPE--ARLDT  137 (293)
T ss_dssp             HHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCccc
Confidence            37889999999999998888888887654  4799999999999999999998  778999999999999876  78889


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                 .|+||++||..+. .+.+++..|++||+++++|+++++.+++++||+|
T Consensus       138 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  217 (293)
T 3rih_A          138 MTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTGYPGWSHYGASKAAQLGFMRTAAIELAPRGVTV  217 (293)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEE
Confidence            999999999999998                 5899999999886 7888999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++....   .++..+.+.+..  |++|+++|+|
T Consensus       218 n~v~PG~v~t~~~~~~---~~~~~~~~~~~~--p~~r~~~p~d  255 (293)
T 3rih_A          218 NAILPGNILTEGLVDM---GEEYISGMARSI--PMGMLGSPVD  255 (293)
T ss_dssp             EEEEECSBCCHHHHHT---CHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             EEEecCCCcCcchhhc---cHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999987654   345566666666  8899999875

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=100.00  E-value=4e-33  Score=206.10  Aligned_cols=174  Identities=18%  Similarity=0.221  Sum_probs=151.2

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++| +.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        23 ~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~  100 (246)
T 3osu_A           23 QLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNAGITRD--NLLMR  100 (246)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCccc
Confidence            37889999999887 456677666665433 4789999999999999999998  778999999999999876  78888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||++|
T Consensus       101 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn  180 (246)
T 3osu_A          101 MKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVGNPGQANYVATKAGVIGLTKSAARELASRGITVN  180 (246)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCCCCCChHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            999999999999998                 579999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++....   .++..+.+....  |++|+++|+|
T Consensus       181 ~v~PG~v~t~~~~~~---~~~~~~~~~~~~--p~~r~~~~~d  217 (246)
T 3osu_A          181 AVAPGFIVSDMTDAL---SDELKEQMLTQI--PLARFGQDTD  217 (246)
T ss_dssp             EEEECSBGGGCCSCS---CHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEEECCCcCCccccc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999987654   445556666565  8899999875

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=100.00  E-value=1.6e-32  Score=205.81  Aligned_cols=175  Identities=20%  Similarity=0.203  Sum_probs=152.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+. .+++..+++... .++.++.+|++|.++++++.+. .+++++|+||||||....  .++.+.+
T Consensus        50 ~la~~G~~V~~~~r~~-~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~  126 (273)
T 3uf0_A           50 GYARAGAHVLAWGRTD-GVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVDVLVNNAGIIAR--APAEEVS  126 (273)
T ss_dssp             HHHHTTCEEEEEESST-HHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHCCCEEEEEcCHH-HHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcEEEECCCCCCC--CCchhCC
Confidence            3788999999999764 445555555433 5799999999999999999666 677899999999999877  7888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+||+|
T Consensus       127 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  206 (273)
T 3uf0_A          127 LGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGGRNVAAYAASKHAVVGLTRALASEWAGRGVGVNAL  206 (273)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       207 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  243 (273)
T 3uf0_A          207 APGYVVTANTAALRA-DDERAAEITARI--PAGRWATPED  243 (273)
T ss_dssp             EECSBCSGGGHHHHT-SHHHHHHHHHHS--TTSSCBCGGG
T ss_pred             EeCCCcCCchhhccc-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999876644 556677777777  8899999986

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=100.00  E-value=5.2e-33  Score=208.85  Aligned_cols=175  Identities=22%  Similarity=0.256  Sum_probs=150.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        48 ~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  123 (277)
T 3gvc_A           48 RLADEGCHVLCADIDGDAADAAATKIGC--GAAACRVDVSDEQQIIAMVDACVAAFGGVDKLVANAGVVHL--ASLIDTT  123 (277)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHCS--SCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--BCTTTCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHcCC--cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCC
Confidence            3788999999999999999988888855  788999999999999999998  778999999999999876  7888899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+||+|
T Consensus       124 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  203 (277)
T 3gvc_A          124 VEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVAVGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTL  203 (277)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCCh-HHHHHHHH---HhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDK-KTFKELLY---ASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~e  181 (181)
                      +||++.|++........+ ...+....   ..  |++|+++|||
T Consensus       204 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~ped  245 (277)
T 3gvc_A          204 LPAFVDTPMQQTAMAMFDGALGAGGARSMIAR--LQGRMAAPEE  245 (277)
T ss_dssp             EECSBCCHHHHHHHTCC------CCHHHHHHH--HHSSCBCHHH
T ss_pred             eeCCccCchHHHhhhcchhhHHHHhhhhhhhc--cccCCCCHHH
Confidence            999999998766543222 11111122   44  7799998875

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=100.00  E-value=6.1e-33  Score=208.28  Aligned_cols=178  Identities=13%  Similarity=0.111  Sum_probs=153.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|+++.++++++++. .+.+++|+||||||....  ..+.+.+
T Consensus        52 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  129 (275)
T 4imr_A           52 GLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVDILVINASAQIN--ATLSALT  129 (275)
T ss_dssp             HHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCCEEEECCCCCCC--BCGGGCC
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CCcccCC
Confidence            37889999999999988777776666432 5799999999999999999998 444899999999998876  7888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.+....|++||+++++|+++++.+++++||+||+|
T Consensus       130 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  209 (275)
T 4imr_A          130 PNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRPKSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTL  209 (275)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            9999999999998                 58999999999999888888999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++........++..+.+.... .|++|+++|+|
T Consensus       210 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~p~~r~~~ped  248 (275)
T 4imr_A          210 APGLVDTDRNADRRAQDPEGWDEYVRTL-NWMGRAGRPEE  248 (275)
T ss_dssp             EESSBCSHHHHHHHHHCHHHHHHHHHHH-STTCSCBCGGG
T ss_pred             EeccccCcccccccccChHHHHHHHhhc-CccCCCcCHHH
Confidence            9999999987765444555566655553 27899999986

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=100.00  E-value=2.9e-32  Score=203.20  Aligned_cols=177  Identities=21%  Similarity=0.287  Sum_probs=150.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccccc-CCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGII-SNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~-~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++++++++  .+++++|+||||||.. ..  .++.+
T Consensus        26 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~--~~~~~  103 (262)
T 1zem_A           26 RLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF--APVQD  103 (262)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC--BCGGG
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC--Ccccc
Confidence            37889999999999998888777766443 4788999999999999999998  6788999999999987 44  67888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+||
T Consensus       104 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn  183 (262)
T 1zem_A          104 YPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVN  183 (262)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCCchHHHHHHHHHHHHHHHHHHHHhhCeEEE
Confidence            999999999999998                 379999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchh------------cCCChH-HHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNA------------MGIDKK-TFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++....            ....++ ..+.+....  |++|+++|+|
T Consensus       184 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  236 (262)
T 1zem_A          184 AISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV--PMRRYGDINE  236 (262)
T ss_dssp             EEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS--TTSSCBCGGG
T ss_pred             EEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999987553            111233 334444445  8899999986

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=100.00  E-value=1e-32  Score=207.81  Aligned_cols=178  Identities=17%  Similarity=0.143  Sum_probs=149.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||..... .++.+.
T Consensus        47 ~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~-~~~~~~  125 (283)
T 3v8b_A           47 ALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHLDIVVANAGINGVW-APIDDL  125 (283)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCB-CCTTTS
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CchhhC
Confidence            37889999999999999999988888654 6899999999999999999998  7789999999999986432 677889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccc--cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~--~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.++|+..+++|+.                 .|+||++||.++..  +.++...|++||+++++|+++++.+++++||+|
T Consensus       126 ~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  205 (283)
T 3v8b_A          126 KPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTFTTPGATAYTATKAAQVAIVQQLALELGKHHIRV  205 (283)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCSTTCHHHHHHHHHHHHHHHHHHHHTTTTTEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCCCCCCchHHHHHHHHHHHHHHHHHHHhCccCcEE
Confidence            99999999999998                 58999999999887  778899999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHH----HHHHHHHhhccc--ccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKT----FKELLYASANLK--GVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~e  181 (181)
                      |+|+||+++|++........+..    .+......  |+  +|+++|+|
T Consensus       206 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~r~~~ped  252 (283)
T 3v8b_A          206 NAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQV--PITDGQPGRSED  252 (283)
T ss_dssp             EEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSC--GGGTTCCBCHHH
T ss_pred             EEEEeCCCcCCcccccccccchhhhhhhhhhhhcC--ccccCCCCCHHH
Confidence            99999999999876643222111    11111222  55  88888865

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=100.00  E-value=2.1e-32  Score=204.98  Aligned_cols=175  Identities=18%  Similarity=0.222  Sum_probs=151.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||........+.+.+
T Consensus        30 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~  107 (271)
T 3tzq_B           30 VLARAGARVVLADLPETDLAGAAASVGR--GAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMT  107 (271)
T ss_dssp             HHHHTTCEEEEEECTTSCHHHHHHHHCT--TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCC
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHhCC--CeEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCC
Confidence            3788999999999999888888877754  788999999999999999998  778999999999998743125677899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+|
T Consensus       108 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v  187 (271)
T 3tzq_B          108 VDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAI  187 (271)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSBCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.....  .++..+.+....  |++|+++|+|
T Consensus       188 ~PG~v~t~~~~~~~--~~~~~~~~~~~~--~~~r~~~p~d  223 (271)
T 3tzq_B          188 APGLVRTPRLEVGL--PQPIVDIFATHH--LAGRIGEPHE  223 (271)
T ss_dssp             EECCBCCTTTC-----CHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             EeCCCcCccccccC--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999876322  345555555555  8899999875

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=100.00  E-value=2.3e-32  Score=205.22  Aligned_cols=173  Identities=25%  Similarity=0.296  Sum_probs=149.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+.
T Consensus        51 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~  128 (276)
T 3r1i_A           51 AYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGIDIAVCNAGIVSV--QAMLDM  128 (276)
T ss_dssp             HHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            37889999999999988888777766443 4788999999999999999998  778999999999999877  788889


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccC--ccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIG--EALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~--~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +.++|+..+++|+.                  .|+||++||..+..+.  ++...|++||+++++|+++++.+++++||+
T Consensus       129 ~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIr  208 (276)
T 3r1i_A          129 PLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHIINIPQQVSHYCTSKAAVVHLTKAMAVELAPHQIR  208 (276)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCCSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhcccCCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcE
Confidence            99999999999998                  2889999999887654  357889999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||+++|++.....    +..+.+....  |++|+++|+|
T Consensus       209 vn~v~PG~v~T~~~~~~~----~~~~~~~~~~--p~~r~~~ped  246 (276)
T 3r1i_A          209 VNSVSPGYIRTELVEPLA----DYHALWEPKI--PLGRMGRPEE  246 (276)
T ss_dssp             EEEEEECCBCSTTTGGGG----GGHHHHGGGS--TTSSCBCGGG
T ss_pred             EEEEeeCCCcCCccccch----HHHHHHHhcC--CCCCCcCHHH
Confidence            999999999999876642    3444445555  8899999986

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=100.00  E-value=8.4e-33  Score=206.73  Aligned_cols=175  Identities=19%  Similarity=0.204  Sum_probs=142.6

Q ss_pred             CcccCCCEEEEee-cchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIAD-VQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++ |+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        46 ~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~--~~~~~  123 (267)
T 3u5t_A           46 RLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGVDVLVNNAGIMPL--TTIAE  123 (267)
T ss_dssp             HHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCEEEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhh
Confidence            3788999999884 5566666665555332 4789999999999999999998  778999999999999876  78889


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .|+||++||..+..+.+++..|++||+++++|+++|+.|++++||+||+|
T Consensus       124 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  203 (267)
T 3u5t_A          124 TGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLHPSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAV  203 (267)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEE
Confidence            999999999999998               57999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.....  .++..+.+....  |++|+++|+|
T Consensus       204 ~PG~v~T~~~~~~~--~~~~~~~~~~~~--p~~r~~~ped  239 (267)
T 3u5t_A          204 APGPTATDLFLEGK--SDEVRDRFAKLA--PLERLGTPQD  239 (267)
T ss_dssp             EECCBC-------------CHHHHHTSS--TTCSCBCHHH
T ss_pred             EECCCcCccccccC--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999875532  234444555555  8899999875

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=100.00  E-value=2.8e-32  Score=206.39  Aligned_cols=177  Identities=20%  Similarity=0.236  Sum_probs=142.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC--CCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN--MDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~--~~~~~~   75 (181)
                      +|+++|++|++++|+....+.. +++... .++.++.||++|.+++++++++  .+++++|+||||||....  ...++.
T Consensus        52 ~la~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~  130 (293)
T 3grk_A           52 AAREAGAELAFTYQGDALKKRV-EPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYI  130 (293)
T ss_dssp             HHHHTTCEEEEEECSHHHHHHH-HHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGG
T ss_pred             HHHHCCCEEEEEcCCHHHHHHH-HHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCccccccccc
Confidence            3788999999999985433322 222111 3688999999999999999998  778999999999998751  016778


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++|+..+++|+.               .|+||++||..+..+.+.+..|++||+++++|+++|+.+++++||+||+
T Consensus       131 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  210 (293)
T 3grk_A          131 DTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGAEKVMPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNA  210 (293)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             ccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhhccCCCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEE
Confidence            8999999999999998               5899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++...... .++..+.+....  |++|+++|+|
T Consensus       211 v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  248 (293)
T 3grk_A          211 ISAGPIKTLAASGIGD-FRYILKWNEYNA--PLRRTVTIDE  248 (293)
T ss_dssp             EEECCCCC------CC-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EecCCCcchhhhcccc-hHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999998766532 344555555566  8899999875

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=100.00  E-value=1.3e-32  Score=205.96  Aligned_cols=171  Identities=23%  Similarity=0.270  Sum_probs=147.2

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++| +.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        47 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~  124 (269)
T 4dmm_A           47 ELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLDVLVNNAGITRD--TLLLR  124 (269)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCccc
Confidence            37889999999998 566666666555432 4789999999999999999998  778999999999999876  78888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||.++..+.+++..|++||+++++|+++++.+++++||+||
T Consensus       125 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn  204 (269)
T 4dmm_A          125 MKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGNPGQANYSAAKAGVIGLTKTVAKELASRGITVN  204 (269)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence            999999999999998                 579999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.....      .+.+....  |++|+++|+|
T Consensus       205 ~v~PG~v~T~~~~~~~------~~~~~~~~--p~~r~~~~~d  238 (269)
T 4dmm_A          205 AVAPGFIATDMTSELA------AEKLLEVI--PLGRYGEAAE  238 (269)
T ss_dssp             EEEECCBTTSCSCHHH------HHHHGGGC--TTSSCBCHHH
T ss_pred             EEEECCCcCccccccc------HHHHHhcC--CCCCCCCHHH
Confidence            9999999999865432      13334444  8899998875

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=99.98  E-value=3.7e-32  Score=203.52  Aligned_cols=177  Identities=20%  Similarity=0.174  Sum_probs=147.1

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++++ .+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        37 ~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~  114 (270)
T 3is3_A           37 HLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLDIAVSNSGVVSF--GHLKD  114 (270)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCccc
Confidence            378899999998764 55666665555432 4799999999999999999998  778999999999999876  78889


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEecccc-ccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLA-TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~-~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|+..+++|+.               .|+||++||.. +..+.++...|++||+++++|+++|+.+++++||+||+
T Consensus       115 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~  194 (270)
T 3is3_A          115 VTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFSVPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNA  194 (270)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCCCCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            999999999999998               57999999988 56788889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhc--------CCC-hHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAM--------GID-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~--------~~~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++.....        ... ++..+......  |++|+++|+|
T Consensus       195 v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  242 (270)
T 3is3_A          195 VAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHAS--PLHRNGWPQD  242 (270)
T ss_dssp             EEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHS--TTCSCBCHHH
T ss_pred             EEeCCccChhhhhhhhhccccccccchHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999876432        112 23333344444  8999999975

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=99.98  E-value=3.7e-32  Score=202.93  Aligned_cols=175  Identities=19%  Similarity=0.293  Sum_probs=143.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++...  .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        42 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~  119 (266)
T 3o38_A           42 RALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAGLGGQ--TPVVD  119 (266)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCCcEEEECCCcCCC--CCccc
Confidence            36889999999999999888888777443  5799999999999999999998  778899999999998776  78888


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                  .++||++||..+..+.+++..|+++|+++++|+++++.+++++||+|
T Consensus       120 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v  199 (266)
T 3o38_A          120 MTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRI  199 (266)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCcEE
Confidence            999999999999988                  36899999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.....  .++..+.+....  |++|+++|+|
T Consensus       200 ~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~--~~~r~~~~~d  238 (266)
T 3o38_A          200 NAVSPSIARHKFLEKTS--SSELLDRLASDE--AFGRAAEPWE  238 (266)
T ss_dssp             EEEEECCCCC-------------------CC--TTSSCCCHHH
T ss_pred             EEEeCCcccchhhhccC--cHHHHHHHHhcC--CcCCCCCHHH
Confidence            99999999999876653  233444444444  7889888875

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=99.98  E-value=2.5e-32  Score=206.94  Aligned_cols=178  Identities=19%  Similarity=0.164  Sum_probs=145.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~~   76 (181)
                      +|+++|++|++++|+.+..+...+.....+.+.++.||++|.+++++++++  .+++++|+||||||.....  ..++.+
T Consensus        51 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~  130 (296)
T 3k31_A           51 AVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVD  130 (296)
T ss_dssp             HHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGG
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhh
Confidence            378899999999998644333222111113578999999999999999999  7789999999999986520  146778


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .|+||++||.++..+.+++..|++||+++++|+++|+.+++++||+||+|
T Consensus       131 ~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v  210 (296)
T 3k31_A          131 TSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGAEKVVPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAI  210 (296)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEE
Confidence            899999999999998               57999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++...... .++..+......  |++|+++|+|
T Consensus       211 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  247 (296)
T 3k31_A          211 SAGPVRTLASSGISD-FHYILTWNKYNS--PLRRNTTLDD  247 (296)
T ss_dssp             EECCCCCSSCCSCHH-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EECCCcCchhhcccc-hHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999998765432 234445555555  8899999875

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=99.98  E-value=5.5e-32  Score=199.91  Aligned_cols=174  Identities=17%  Similarity=0.176  Sum_probs=151.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+.
T Consensus        24 ~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~  101 (247)
T 3lyl_A           24 ALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAIDILVNNAGITRD--NLMMRM  101 (247)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCSEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CchhhC
Confidence            37889999999999998888877766443 4799999999999999999998  778899999999999876  788889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+
T Consensus       102 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  181 (247)
T 3lyl_A          102 SEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAGNPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNV  181 (247)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEE
Confidence            99999999999998                 4799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++....   .++..+.+....  |++|+++|+|
T Consensus       182 v~PG~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  217 (247)
T 3lyl_A          182 VAPGFIATDMTDKL---TDEQKSFIATKI--PSGQIGEPKD  217 (247)
T ss_dssp             EEECSBCCTTTTTS---CHHHHHHHHTTS--TTCCCBCHHH
T ss_pred             EeeCcEecccchhc---cHHHHHHHhhcC--CCCCCcCHHH
Confidence            99999999987665   334444444444  7788888865

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=99.98  E-value=1.9e-32  Score=203.25  Aligned_cols=172  Identities=17%  Similarity=0.216  Sum_probs=131.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|++|.+++++++++  .+ +++|+||||||....  .++.+.
T Consensus        26 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~id~lv~nAg~~~~--~~~~~~  102 (252)
T 3h7a_A           26 KFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APLEVTIFNVGANVN--FPILET  102 (252)
T ss_dssp             HHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCEEEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCceEEEECCCcCCC--CCcccC
Confidence            37889999999999998888877776443 5799999999999999999998  55 899999999999876  788899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE-E
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV-N  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v-~  139 (181)
                      +.++|+..+++|+.                 .|+||++||.++..+.++...|++||+++++|+++|+.+++++||+| |
T Consensus       103 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n  182 (252)
T 3h7a_A          103 TDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGGSGFAAFASAKFGLRAVAQSMARELMPKNIHVAH  182 (252)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEE
Confidence            99999999999998                 48999999999999999999999999999999999999999999999 9


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.....+   +..+......  |++ +.+|+|
T Consensus       183 ~v~PG~v~T~~~~~~~~---~~~~~~~~~~--~~~-~~~ped  218 (252)
T 3h7a_A          183 LIIDSGVDTAWVRERRE---QMFGKDALAN--PDL-LMPPAA  218 (252)
T ss_dssp             EEEC---------------------------------CCHHH
T ss_pred             EecCCccCChhhhccch---hhhhhhhhcC--Ccc-CCCHHH
Confidence            99999999998776532   2222333333  444 666653

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=99.98  E-value=8.2e-32  Score=201.92  Aligned_cols=177  Identities=21%  Similarity=0.256  Sum_probs=145.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  ..+ +++|+||||||....  .++.+
T Consensus        40 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~  117 (273)
T 1ae1_A           40 ELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH--KEAKD  117 (273)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCcEEEECCCCCCC--CChhh
Confidence            36789999999999998888776665332 4788999999999999999998  667 899999999998765  77888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||.++..+.++...|+++|+++++|+++++.+++++||+||
T Consensus       118 ~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  197 (273)
T 1ae1_A          118 FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVN  197 (273)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            999999999999988                 489999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCC---ChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI---DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.......   .++..+.+....  |++|+++|+|
T Consensus       198 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  240 (273)
T 1ae1_A          198 SVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT--PMGRAGKPQE  240 (273)
T ss_dssp             EEEECSBC-------------CHHHHHHHHHHS--TTCSCBCHHH
T ss_pred             EEEeCCCcCchhhhhhhcccCcHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999987654321   234445555555  8899999875

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=99.98  E-value=2.1e-32  Score=204.07  Aligned_cols=175  Identities=19%  Similarity=0.252  Sum_probs=140.5

Q ss_pred             CcccCCCEEEEeec---chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADV---QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r---~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|   +.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++
T Consensus        30 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~  107 (262)
T 3ksu_A           30 TFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGKVDIAINTVGKVLK--KPI  107 (262)
T ss_dssp             HHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCSEEEEEECCCCCCS--SCG
T ss_pred             HHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCc
Confidence            37899999999876   456677777766543 5799999999999999999998  778999999999999877  788


Q ss_pred             ccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           75 LDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.++|+..+++|+.               .|+||++||..+..+.++...|++||+++++|+++|+.+++++||+||
T Consensus       108 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn  187 (262)
T 3ksu_A          108 VETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAYTGFYSTYAGNKAPVEHYTRAASKELMKQQISVN  187 (262)
T ss_dssp             GGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHHHCCCCC-----CHHHHHHHHHHHHTTTTTCEEE
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEE
Confidence            89999999999999998               589999999999999899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.....  .++..+.+....  |++|+++|+|
T Consensus       188 ~v~PG~v~T~~~~~~~--~~~~~~~~~~~~--~~~r~~~ped  225 (262)
T 3ksu_A          188 AIAPGPMDTSFFYGQE--TKESTAFHKSQA--MGNQLTKIED  225 (262)
T ss_dssp             EEEECCCCTHHHHTCC----------------CCCCSCCGGG
T ss_pred             EEeeCCCcCccccccC--chHHHHHHHhcC--cccCCCCHHH
Confidence            9999999999876543  223344444455  8899999986

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=99.98  E-value=4.5e-32  Score=204.13  Aligned_cols=177  Identities=18%  Similarity=0.253  Sum_probs=142.1

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++| +.+.+++..+++...  .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.
T Consensus        44 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~  121 (281)
T 3v2h_A           44 TLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGADILVNNAGVQFV--EKIE  121 (281)
T ss_dssp             HHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSCSEEEECCCCCCC--CCGG
T ss_pred             HHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC--CCcc
Confidence            37899999999999 567777776666432  5799999999999999999998  778999999999999876  7888


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+|
T Consensus       122 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~v  201 (281)
T 3v2h_A          122 DFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVASPFKSAYVAAKHGIMGLTKTVALEVAESGVTV  201 (281)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            8999999999999998                 48999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCCh--------HHHH-HHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDK--------KTFK-ELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~--------~~~~-~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++.....+...        +... .+....  |++|+++|+|
T Consensus       202 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~ed  251 (281)
T 3v2h_A          202 NSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQ--PTKKFITVEQ  251 (281)
T ss_dssp             EEEEECSBCC----------------------------CC--TTCSCBCHHH
T ss_pred             EEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcC--CCCCccCHHH
Confidence            999999999998765433211        1111 123333  8899998875

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=99.98  E-value=3.3e-32  Score=204.79  Aligned_cols=176  Identities=16%  Similarity=0.173  Sum_probs=128.1

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++| +.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||.......++.+
T Consensus        48 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~  127 (280)
T 4da9_A           48 ALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLD  127 (280)
T ss_dssp             HHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCCEEEEECC------CCGGG
T ss_pred             HHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhh
Confidence            37889999999996 677777776666433 5799999999999999999998  7789999999999984221277888


Q ss_pred             CCHHHHHHhhheeec--------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           77 TDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      .+.++|+..+++|+.                    .|+||++||..+..+.++...|++||+++++|+++++.+++++||
T Consensus       128 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI  207 (280)
T 4da9_A          128 LKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSAVMTSPERLDYCMSKAGLAAFSQGLALRLAETGI  207 (280)
T ss_dssp             CCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHTTTTE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence            999999999999998                    258999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHH-HhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLY-ASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e  181 (181)
                      +||+|+||++.|++.....+   +..+.... ..  |++|+++|+|
T Consensus       208 ~vn~v~PG~v~T~~~~~~~~---~~~~~~~~~~~--p~~r~~~ped  248 (280)
T 4da9_A          208 AVFEVRPGIIRSDMTAAVSG---KYDGLIESGLV--PMRRWGEPED  248 (280)
T ss_dssp             EEEEEEECCBCC---------------------------CCBCHHH
T ss_pred             EEEEEeecCCcCCchhhcch---hHHHHHhhcCC--CcCCcCCHHH
Confidence            99999999999998766532   22223333 34  8899999875

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=99.98  E-value=6.1e-32  Score=201.02  Aligned_cols=176  Identities=24%  Similarity=0.296  Sum_probs=149.0

Q ss_pred             cccCCCEEEEeecchHH--HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDL--CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~--~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+.  +++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        22 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~   99 (258)
T 3a28_C           22 LAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGFDVLVNNAGIAQI--KPLLE   99 (258)
T ss_dssp             HHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhh
Confidence            67899999999999877  77766666432 4789999999999999999998  778899999999998766  77888


Q ss_pred             CCHHHHHHhhheeec-----------------c-eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------L-GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~-~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                 . |+||++||..+..+.++...|+++|+++++|+++++.+++++||+|
T Consensus       100 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  179 (258)
T 3a28_C          100 VTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQGFPILSAYSTTKFAVRGLTQAAAQELAPKGHTV  179 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccCCCCchhHHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence            999999999999998                 3 8999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhc-------CC-ChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAM-------GI-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++.....       .. .++..+.+....  |++|+++|+|
T Consensus       180 n~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  228 (258)
T 3a28_C          180 NAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSI--ALGRPSVPED  228 (258)
T ss_dssp             EEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcC--CCCCccCHHH
Confidence            99999999999876532       11 133344444444  8899999875

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.98  E-value=2.8e-31  Score=198.46  Aligned_cols=175  Identities=23%  Similarity=0.284  Sum_probs=149.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHc-CC-CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEF-DS-DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~-~~-~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+.+++..+++ .. ..++.++.+|+++.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        41 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~  118 (267)
T 1vl8_A           41 LAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR--HPAEEF  118 (267)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CChhhC
Confidence            6889999999999988887776655 11 13688999999999999999998  678899999999998766  778889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEecccc-ccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLA-TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~-~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                 .|+||++||.+ +..+.++...|+++|+++++|+++++.+++++||++|
T Consensus       119 ~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  198 (267)
T 1vl8_A          119 PLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVN  198 (267)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhccCCCCChhHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            99999999999987                 47999999998 8888888999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       199 ~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~~~~~p~d  237 (267)
T 1vl8_A          199 VIAPGWYRTKMTEAVFS-DPEKLDYMLKRI--PLGRTGVPED  237 (267)
T ss_dssp             EEEECCBCSTTTHHHHT-CHHHHHHHHHTC--TTSSCBCGGG
T ss_pred             EEEeccCcccccccccc-ChHHHHHHHhhC--CCCCCcCHHH
Confidence            99999999998765432 344444555555  7899999976

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=99.97  E-value=1e-31  Score=199.92  Aligned_cols=176  Identities=27%  Similarity=0.322  Sum_probs=137.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|+++.+++++++++  .+++++|+||||||..... ..+.+.+
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~-~~~~~~~  104 (261)
T 3n74_A           28 RFAKGGAKVVIVDRDKAGAERVAGEIGD--AALAVAADISKEADVDAAVEAALSKFGKVDILVNNAGIGHKP-QNAELVE  104 (261)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCT--TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS-CCGGGSC
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHhCC--ceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCC-CCcccCC
Confidence            3788999999999999999998888865  799999999999999999998  7788999999999987632 6777889


Q ss_pred             HHHHHHhhheeec---------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           79 NEKVKRVMIMVVF---------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        79 ~~~~~~~~~~n~~---------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .++|+..+++|+.                     .++||++||..+..+.+.+..|+++|+++++|+++|+.+++++||+
T Consensus       105 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  184 (261)
T 3n74_A          105 PEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGAGRPRPNLAWYNATKGWVVSVTKALAIELAPAKIR  184 (261)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhhcCCCCCccHHHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            9999999999998                     2469999999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCC-ChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGI-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||.++|++...+... .++..+.+....  |++|+.+|+|
T Consensus       185 v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  227 (261)
T 3n74_A          185 VVALNPVAGETPLLTTFMGEDSEEIRKKFRDSI--PMGRLLKPDD  227 (261)
T ss_dssp             EEEEEEC-------------------------C--TTSSCCCHHH
T ss_pred             EEEEecCcccChhhhhhcccCcHHHHHHHhhcC--CcCCCcCHHH
Confidence            99999999999988776533 334444455555  8899998875

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=99.97  E-value=7.5e-32  Score=200.72  Aligned_cols=175  Identities=19%  Similarity=0.193  Sum_probs=134.6

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++ +|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||..... .++.+
T Consensus        27 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~~  105 (259)
T 3edm_A           27 RFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEIHGLVHVAGGLIAR-KTIAE  105 (259)
T ss_dssp             HHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCCC-CCTTT
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCccCCC-CChhh
Confidence            378899999998 56677777776666443 5789999999999999999998  7789999999999987332 77888


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|+..+++|+.               .|+||++||..+. .+.++...|++||+++++|+++++.|++++ |+||+
T Consensus       106 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-I~vn~  184 (259)
T 3edm_A          106 MDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGGGPGALAYATSKGAVMTFTRGLAKEVGPK-IRVNA  184 (259)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCCSTTCHHHHHHHHHHHHHHHHHHHHHTTT-CEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHCCC-CEEEE
Confidence            999999999999998               5799999999988 678889999999999999999999999986 99999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++......  ++..+.+....  |++|+++|+|
T Consensus       185 v~PG~v~T~~~~~~~~--~~~~~~~~~~~--p~~r~~~ped  221 (259)
T 3edm_A          185 VCPGMISTTFHDTFTK--PEVRERVAGAT--SLKREGSSED  221 (259)
T ss_dssp             EEECCBCC--------------------------CCBCHHH
T ss_pred             EEECCCcCcccccccC--hHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998776542  34445555555  8899999875

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=99.97  E-value=1.1e-31  Score=198.32  Aligned_cols=173  Identities=23%  Similarity=0.243  Sum_probs=147.6

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++| +.+++++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        24 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~  101 (246)
T 2uvd_A           24 LAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQVDILVNNAGVTKD--NLLMRM  101 (246)
T ss_dssp             HHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCGGGC
T ss_pred             HHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            6789999999999 887777766665322 4788999999999999999998  678899999999998766  778889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+
T Consensus       102 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~  181 (246)
T 2uvd_A          102 KEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNA  181 (246)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEE
Confidence            99999999999987                 4899999999999888999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++.....   ++..+.+....  |++|+++|+|
T Consensus       182 v~Pg~v~t~~~~~~~---~~~~~~~~~~~--p~~~~~~~~d  217 (246)
T 2uvd_A          182 IAPGFIATDMTDVLD---ENIKAEMLKLI--PAAQFGEAQD  217 (246)
T ss_dssp             EEECSBGGGCSSCCC---TTHHHHHHHTC--TTCSCBCHHH
T ss_pred             EEeccccCcchhhcC---HHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999875532   23334444444  7788888875

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=99.97  E-value=2.4e-32  Score=203.14  Aligned_cols=172  Identities=21%  Similarity=0.226  Sum_probs=131.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc----
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT----   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~----   74 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  ..+    
T Consensus        26 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~  101 (257)
T 3tpc_A           26 MLAQEGATVLGLDLKPPAGEEPAAELGA--AVRFRNADVTNEADATAALAFAKQEFGHVHGLVNCAGTAPG--EKILGRS  101 (257)
T ss_dssp             HHHHTTCEEEEEESSCC--------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSEETT
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHHhCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--Ccccccc
Confidence            3788999999999998888877776654  788999999999999999998  778999999999998765  333    


Q ss_pred             ccCCHHHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      .+.+.++|+..+++|+.                       .|+||++||..+..+.++...|++||+++++|+++++.++
T Consensus       102 ~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  181 (257)
T 3tpc_A          102 GPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAAFDGQIGQAAYAASKGGVAALTLPAAREL  181 (257)
T ss_dssp             EECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhhccCCCCCcchHHHHHHHHHHHHHHHHHH
Confidence            36788999999999998                       2679999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccc-ccccccCC
Q 042200          132 GQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      +++||+||+|+||++.|++.....+   +..+.+....  |+ +|+++|+|
T Consensus       182 ~~~gi~vn~v~PG~v~t~~~~~~~~---~~~~~~~~~~--p~~~r~~~~~d  227 (257)
T 3tpc_A          182 ARFGIRVVTIAPGIFDTPMMAGMPQ---DVQDALAASV--PFPPRLGRAEE  227 (257)
T ss_dssp             GGGTEEEEEEEECCBSCC-----------------CCS--SSSCSCBCHHH
T ss_pred             HHcCeEEEEEEeCCCCChhhccCCH---HHHHHHHhcC--CCCCCCCCHHH
Confidence            9999999999999999998766532   3333334444  77 88988875

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=99.97  E-value=6.3e-32  Score=198.47  Aligned_cols=150  Identities=17%  Similarity=0.140  Sum_probs=131.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        22 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~~   97 (235)
T 3l6e_A           22 GLVERGHQVSMMGRRYQRLQQQELLLGN--AVIGIVADLAHHEDVDVAFAAAVEWGGLPELVLHCAGTGEF--GPVGVYT   97 (235)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEEEECCCC--------CCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCC--CChHhCC
Confidence            3788999999999999999888887754  699999999999999999998  778999999999999766  7888899


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|+..+++|+.                +++||++||.++..+.++...|++||+++++|+++|+.+++++||++|+|+
T Consensus        98 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  177 (235)
T 3l6e_A           98 AEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGKANESLYCASKWGMRGFLESLRAELKDSPLRLVNLY  177 (235)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSCSSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEe
Confidence            9999999999998                469999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchh
Q 042200          143 HIVSATPFFCNA  154 (181)
Q Consensus       143 Pg~v~t~~~~~~  154 (181)
                      ||+++|++....
T Consensus       178 PG~v~T~~~~~~  189 (235)
T 3l6e_A          178 PSGIRSEFWDNT  189 (235)
T ss_dssp             EEEECCCC----
T ss_pred             CCCccCcchhcc
Confidence            999999987554

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.3e-31  Score=197.49  Aligned_cols=173  Identities=18%  Similarity=0.182  Sum_probs=146.6

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++  |+.|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||..... .++.+.
T Consensus        22 l~~~g~~~~v~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~-~~~~~~   98 (254)
T 3kzv_A           22 LFSLDKDTVVYGVARSEAPLKKLKEKYGD--RFFYVVGDITEDSVLKQLVNAAVKGHGKIDSLVANAGVLEPV-QNVNEI   98 (254)
T ss_dssp             HHHHCSSCEEEEEESCHHHHHHHHHHHGG--GEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEEECCCCCCC-TTTTSC
T ss_pred             HHhcCCCeEEEEecCCHHHHHHHHHHhCC--ceEEEECCCCCHHHHHHHHHHHHHhcCCccEEEECCcccCCC-CCcccC
Confidence            5566  47899999999998888777754  799999999999999999998  7789999999999985432 677889


Q ss_pred             CHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.++|+..+++|+.                +|+||++||..+..+.+++..|++||+++++|+++|+.++  .||+||+|
T Consensus        99 ~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~--~~i~vn~v  176 (254)
T 3kzv_A           99 DVNAWKKLYDINFFSIVSLVGIALPELKKTNGNVVFVSSDACNMYFSSWGAYGSSKAALNHFAMTLANEE--RQVKAIAV  176 (254)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCSCCCCSSCCSHHHHHHHHHHHHHHHHHHHHC--TTSEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEcCchhccCCCCcchHHHHHHHHHHHHHHHHhhc--cCcEEEEE
Confidence            99999999999998                5899999999999999999999999999999999999998  58999999


Q ss_pred             ecCcccCcccchhcCC------ChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGI------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++.......      .++..+.+....  |++|+++|+|
T Consensus       177 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~p~d  220 (254)
T 3kzv_A          177 APGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLK--ENNQLLDSSV  220 (254)
T ss_dssp             ECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHH--TTC----CHH
T ss_pred             eCCcccchhHHHhhcccCccccCHHHHHHHHHHH--hcCCcCCccc
Confidence            9999999998765432      356666666666  8899999975

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=99.97  E-value=8.7e-32  Score=201.70  Aligned_cols=172  Identities=20%  Similarity=0.163  Sum_probs=135.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||..... .++.+.+
T Consensus        47 ~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~-~~~~~~~  123 (272)
T 4dyv_A           47 ALAGAGYGVALAGRRLDALQETAAEIGD--DALCVPTDVTDPDSVRALFTATVEKFGRVDVLFNNAGTGAPA-IPMEDLT  123 (272)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHTS--CCEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS-SCGGGCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhCC--CeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CChhhCC
Confidence            3788999999999999999998888865  789999999999999999998  7789999999999986542 5788899


Q ss_pred             HHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           79 NEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        79 ~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .++|+..+++|+.                   .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||
T Consensus       124 ~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn  203 (272)
T 4dyv_A          124 FAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATSPRPYSAPYTATKHAITGLTKSTSLDGRVHDIACG  203 (272)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhCccCEEEE
Confidence            9999999999998                   279999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.+.+.+..    .......  |++|+++|+|
T Consensus       204 ~v~PG~v~T~~~~~~~~~~----~~~~~~~--~~~~~~~ped  239 (272)
T 4dyv_A          204 QIDIGNADTPMAQKMKAGV----PQADLSI--KVEPVMDVAH  239 (272)
T ss_dssp             EEEEEECC------------------------------CHHH
T ss_pred             EEEECcccChhhhhhcccc----hhhhhcc--cccCCCCHHH
Confidence            9999999999876654321    1112233  5677777764

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=99.97  E-value=1.2e-31  Score=200.37  Aligned_cols=170  Identities=18%  Similarity=0.186  Sum_probs=145.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++...     ..+.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        35 ~l~~~G~~V~~~~r~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  107 (266)
T 3p19_A           35 RFSEEGHPLLLLARRVERLKALNL-----PNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVNNAGMMLL--GQIDTQE  107 (266)
T ss_dssp             HHHHTTCCEEEEESCHHHHHTTCC-----TTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEECCCCCCC--CCTTTSC
T ss_pred             HHHHCCCEEEEEECCHHHHHHhhc-----CCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEECCCcCCC--CCcccCC
Confidence            378899999999999887654321     2688999999999999999998  778999999999999876  7888899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||.++..+.++...|++||+++++|+++|+.+++++||+||+|
T Consensus       108 ~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v  187 (266)
T 3p19_A          108 ANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTFPDHAAYCGTKFAVHAISENVREEVAASNVRVMTI  187 (266)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCCCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHH-HhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLY-ASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e  181 (181)
                      +||+++|++......  .+..+.... ..  |++|+++|+|
T Consensus       188 ~PG~v~T~~~~~~~~--~~~~~~~~~~~~--~~~r~~~ped  224 (266)
T 3p19_A          188 APSAVKTELLSHTTS--QQIKDGYDAWRV--DMGGVLAADD  224 (266)
T ss_dssp             EECSBSSSGGGGCSC--HHHHHHHHHHHH--HTTCCBCHHH
T ss_pred             eeCccccchhhcccc--hhhhHHHHhhcc--cccCCCCHHH
Confidence            999999999776532  222222222 23  7899998875

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=99.97  E-value=9.1e-32  Score=203.40  Aligned_cols=176  Identities=19%  Similarity=0.213  Sum_probs=148.0

Q ss_pred             CcccCCCEEEEeecchHHH-HHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLC-RALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.. +...+.+... .++.++.+|++|.+++++++++  .+++++|+||||||..... ..+.+
T Consensus        66 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~-~~~~~  144 (291)
T 3ijr_A           66 AFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLNILVNNVAQQYPQ-QGLEY  144 (291)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCCEEEECCCCCCCC-SSGGG
T ss_pred             HHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCC-CCccc
Confidence            3788999999999986543 3333333322 5799999999999999999998  7789999999999986542 57788


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .++||++||..+..+.++...|+++|+++++|+++++.+++++||+||+|
T Consensus       145 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v  224 (291)
T 3ijr_A          145 ITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGNETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGV  224 (291)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEE
Confidence            899999999999998               57999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.....  .++..+.+....  |++|+++|+|
T Consensus       225 ~PG~v~T~~~~~~~--~~~~~~~~~~~~--p~~r~~~p~d  260 (291)
T 3ijr_A          225 APGPIWTPLIPSSF--DEKKVSQFGSNV--PMQRPGQPYE  260 (291)
T ss_dssp             EECSBCSTHHHHHS--CHHHHHHTTTTS--TTSSCBCGGG
T ss_pred             eeCCCcCCcccccC--CHHHHHHHHccC--CCCCCcCHHH
Confidence            99999999876543  344455555555  8899999986

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=99.97  E-value=2.9e-31  Score=196.21  Aligned_cols=172  Identities=22%  Similarity=0.245  Sum_probs=145.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~  104 (247)
T 2jah_A           27 LAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLDILVNNAGIMLL--GPVEDAD  104 (247)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--CCSTTCC
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CchhhCC
Confidence            6789999999999998888777666432 4789999999999999999998  678899999999998765  7788899


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|+..+++|+.                +|+||++||.++..+.++...|+++|+++++|+++++.+++++||+||+|+
T Consensus       105 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~  184 (247)
T 2jah_A          105 TTDWTRMIDTNLLGLMYMTRAALPHLLRSKGTVVQMSSIAGRVNVRNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIE  184 (247)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEccHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEE
Confidence            9999999999998                379999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccc--cccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVV--LKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e  181 (181)
                      ||++.|++.....  . ..........  | +|+  ++|+|
T Consensus       185 PG~v~T~~~~~~~--~-~~~~~~~~~~--~-~~~~~~~ped  219 (247)
T 2jah_A          185 PGTTDTELRGHIT--H-TATKEMYEQR--I-SQIRKLQAQD  219 (247)
T ss_dssp             ECSBSSSGGGGCC--C-HHHHHHHHHH--T-TTSCCBCHHH
T ss_pred             CCCCCCcchhccc--c-hhhHHHHHhc--c-cccCCCCHHH
Confidence            9999999876532  1 2222333333  4 565  67654

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.2e-31  Score=200.83  Aligned_cols=173  Identities=20%  Similarity=0.173  Sum_probs=147.0

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++++ .+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        50 ~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~  127 (271)
T 3v2g_A           50 RLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAGIWHS--APLEE  127 (271)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhh
Confidence            378899999999665 46666666665432 4789999999999999999998  778999999999999876  78889


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEecccccccc-CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETI-GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~-~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|+..+++|+.               .|+||++||..+..+ .+++..|+++|+++++|+++++.+++++||+||+
T Consensus       128 ~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~  207 (271)
T 3v2g_A          128 TTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVPWPGISLYSASKAALAGLTKGLARDLGPRGITVNI  207 (271)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCCSTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCCCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            999999999999998               589999999877665 7889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++....    ++..+......  |++|+++|+|
T Consensus       208 v~PG~v~T~~~~~~----~~~~~~~~~~~--~~~r~~~ped  242 (271)
T 3v2g_A          208 VHPGSTDTDMNPAD----GDHAEAQRERI--ATGSYGEPQD  242 (271)
T ss_dssp             EEECSBCSSSSCSS----CSSHHHHHHTC--TTSSCBCHHH
T ss_pred             EecCCCcCCccccc----chhHHHHHhcC--CCCCCCCHHH
Confidence            99999999986542    23445555566  8899999875

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=99.97  E-value=2.2e-31  Score=198.25  Aligned_cols=176  Identities=20%  Similarity=0.220  Sum_probs=149.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .++ +++|+||||||....  .++.+
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~  105 (260)
T 2ae2_A           28 ELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY--KEAKD  105 (260)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCCEEEECCCCCCC--CChhh
Confidence            36889999999999998888776665332 4788999999999999999998  667 899999999998765  77888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|
T Consensus       106 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  185 (260)
T 2ae2_A          106 YTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN  185 (260)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            999999999999988                 489999999999999899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHH---HHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFK---ELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||.+.|++...... .++..+   .+....  |++|+++|+|
T Consensus       186 ~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~d  227 (260)
T 2ae2_A          186 GVGPGVIATSLVEMTIQ-DPEQKENLNKLIDRC--ALRRMGEPKE  227 (260)
T ss_dssp             EEEECSBCSHHHHHHTT-SHHHHHHHHHHHHTS--TTCSCBCHHH
T ss_pred             EEecCCCCCcchhhhcc-ChhhHHHHHHHHhcC--CCCCCCCHHH
Confidence            99999999998765432 233222   344444  7899998875

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=99.97  E-value=1.7e-31  Score=199.62  Aligned_cols=177  Identities=18%  Similarity=0.275  Sum_probs=148.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++...   ..+..+.+|+++.++++++++  +++++|+||||||....  .++.+.
T Consensus        29 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~--~~g~id~lv~nAg~~~~--~~~~~~  104 (267)
T 3t4x_A           29 SLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIE--KYPKVDILINNLGIFEP--VEYFDI  104 (267)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHH--HCCCCSEEEECCCCCCC--CCGGGS
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHH--hcCCCCEEEECCCCCCC--CccccC
Confidence            37889999999999998888877766431   468889999999999999887  57889999999999876  788899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++.+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+
T Consensus       105 ~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~  184 (267)
T 3t4x_A          105 PDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPSQEMAHYSATKTMQLSLSRSLAELTTGTNVTVNT  184 (267)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEE
Confidence            99999999999998                 5899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC-------C-hHHHHHHHHHh-h-cccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI-------D-KKTFKELLYAS-A-NLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~-------~-~~~~~~~~~~~-~-~~~~~~~~~~e  181 (181)
                      |+||.+.|++...+...       . ++..+.+.... + .|++|+++|+|
T Consensus       185 v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ped  235 (267)
T 3t4x_A          185 IMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRLIRPEE  235 (267)
T ss_dssp             EEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSCBCTHH
T ss_pred             EeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCccCHHH
Confidence            99999999976554211       1 22233333332 1 26899999975

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=99.97  E-value=3.7e-31  Score=199.03  Aligned_cols=151  Identities=21%  Similarity=0.229  Sum_probs=134.9

Q ss_pred             CcccCCCEEEEeecc------------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccc
Q 042200            1 VFIQHRAKVIIADVQ------------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAG   65 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag   65 (181)
                      +|+++|++|++++|+            .+.+++..+.+... .++.++.+|++|.+++++++++  .+++++|+||||||
T Consensus        29 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg  108 (281)
T 3s55_A           29 ALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAG  108 (281)
T ss_dssp             HHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCC
T ss_pred             HHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence            378899999999997            55666655544332 4799999999999999999998  77899999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHH
Q 042200           66 IISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la  128 (181)
                      ....  .++.+.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++|+
T Consensus       109 ~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la  186 (281)
T 3s55_A          109 ISTI--ALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRIVTVSSMLGHSANFAQASYVSSKWGVIGLTKCAA  186 (281)
T ss_dssp             CCCC--CCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred             CCCC--CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhcCCCCCCchhHHHHHHHHHHHHHHH
Confidence            9876  78889999999999999998                 5899999999999999999999999999999999999


Q ss_pred             HHhcCCCeEEEEEecCcccCcccch
Q 042200          129 VELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       129 ~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      .|++++||+||+|+||++.|++...
T Consensus       187 ~e~~~~gi~vn~v~PG~v~t~~~~~  211 (281)
T 3s55_A          187 HDLVGYGITVNAVAPGNIETPMTHN  211 (281)
T ss_dssp             HHTGGGTEEEEEEEECSBCSTTTSS
T ss_pred             HHHhhcCcEEEEEecCcccCccccc
Confidence            9999999999999999999998753

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=99.97  E-value=5.7e-32  Score=203.12  Aligned_cols=151  Identities=25%  Similarity=0.311  Sum_probs=135.9

Q ss_pred             CcccCCCEEEEeec-------------chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcc
Q 042200            1 VFIQHRAKVIIADV-------------QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNA   64 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~a   64 (181)
                      +|+++|++|++++|             +.+.+++..+.+... .++.++.+|++|.+++++++++  .+++++|+|||||
T Consensus        30 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnA  109 (277)
T 3tsc_A           30 RMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANA  109 (277)
T ss_dssp             HHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred             HHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            37899999999998             667777766655433 5799999999999999999998  7789999999999


Q ss_pred             cccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHH
Q 042200           65 GIISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        65 g~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~  126 (181)
                      |....  .++.+.+.++|+..+++|+.                  .|+||++||..+..+.++...|++||+++++|+++
T Consensus       110 g~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  187 (277)
T 3tsc_A          110 GVAAP--QAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAGMKMQPFMIHYTASKHAVTGLARA  187 (277)
T ss_dssp             CCCCC--CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCSSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCC--CChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhhCCCCCCchhhHHHHHHHHHHHHH
Confidence            99877  78889999999999999998                  36999999999999999999999999999999999


Q ss_pred             HHHHhcCCCeEEEEEecCcccCcccch
Q 042200          127 LCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      |+.|++++||+||+|+||++.|++...
T Consensus       188 la~e~~~~gi~vn~v~PG~v~T~~~~~  214 (277)
T 3tsc_A          188 FAAELGKHSIRVNSVHPGPVNTPMGSG  214 (277)
T ss_dssp             HHHHHGGGTEEEEEEEESSBSSGGGSH
T ss_pred             HHHHhCccCeEEEEEEeCCCcCCcccc
Confidence            999999999999999999999998654

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=99.97  E-value=1.5e-31  Score=198.63  Aligned_cols=177  Identities=22%  Similarity=0.232  Sum_probs=148.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        21 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~   98 (256)
T 1geg_A           21 RLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS--TPIESI   98 (256)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCC--BCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhC
Confidence            36789999999999988887776665322 4688999999999999999998  778899999999998765  778889


Q ss_pred             CHHHHHHhhheeec----------------c--eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF----------------L--GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------~--~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                .  |+||++||..+..+.++...|+++|+++++|+++++.+++++||+||
T Consensus        99 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  178 (256)
T 1geg_A           99 TPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN  178 (256)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHcCeEEE
Confidence            99999999999987                2  69999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcC--------CChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMG--------IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++......        ..++..+.+....  |++|+++|+|
T Consensus       179 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  226 (256)
T 1geg_A          179 GYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI--TLGRLSEPED  226 (256)
T ss_dssp             EEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEEECCCccchhhhhhhhccccccCChHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998654310        0122233333344  7899998875

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.97  E-value=1.8e-31  Score=198.06  Aligned_cols=174  Identities=14%  Similarity=0.105  Sum_probs=150.1

Q ss_pred             CcccCCCEEEEee-cchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIAD-VQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++ |+.+..++...++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        32 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~  109 (256)
T 3ezl_A           32 RLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRD--VVFRK  109 (256)
T ss_dssp             HHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--Cchhh
Confidence            3788999999988 5555555444444322 4789999999999999999998  778899999999999876  78888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+++
T Consensus       110 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  189 (256)
T 3ezl_A          110 MTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVN  189 (256)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGSCSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCEEE
Confidence            999999999999998                 489999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.+..   .++..+.+....  |++|+++|+|
T Consensus       190 ~v~PG~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  226 (256)
T 3ezl_A          190 TVSPGYIGTDMVKAI---RPDVLEKIVATI--PVRRLGSPDE  226 (256)
T ss_dssp             EEEECSBCCHHHHTS---CHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             EEEECcccCcccccc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999987664   456677777776  8899998875

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=99.97  E-value=8.9e-31  Score=194.89  Aligned_cols=177  Identities=23%  Similarity=0.247  Sum_probs=149.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|++|.+++++++++  ..++++|+||||||..... .++.+.
T Consensus        33 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~-~~~~~~  111 (260)
T 2zat_A           33 RLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGVDILVSNAAVNPFF-GNIIDA  111 (260)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-BCGGGC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CCcccC
Confidence            36789999999999988887776665332 4688999999999999999998  6788999999999986421 567788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.+++++||++|+
T Consensus       112 ~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  191 (260)
T 2zat_A          112 TEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNC  191 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999988                 4799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       192 v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  229 (260)
T 2zat_A          192 LAPGLIKTNFSQVLWM-DKARKEYMKESL--RIRRLGNPED  229 (260)
T ss_dssp             EEECSBCSSTTHHHHS-SHHHHHHHHHHH--TCSSCBCGGG
T ss_pred             EEECcccCccchhccc-ChHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999998765432 333334444445  7899999986

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=99.97  E-value=7.7e-31  Score=197.78  Aligned_cols=152  Identities=26%  Similarity=0.298  Sum_probs=135.5

Q ss_pred             CcccCCCEEEEeecc----------------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEE
Q 042200            1 VFIQHRAKVIIADVQ----------------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMF   61 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~----------------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi   61 (181)
                      +|+++|++|++++|+                .+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||
T Consensus        30 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv  109 (286)
T 3uve_A           30 RLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIV  109 (286)
T ss_dssp             HHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             HHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence            378899999999887                67777776666443 5799999999999999999998  7789999999


Q ss_pred             EcccccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHH
Q 042200           62 NNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGL  123 (181)
Q Consensus        62 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l  123 (181)
                      ||||..... .++.+.+.++|+..+++|+.                  .|+||++||..+..+.++...|++||+++++|
T Consensus       110 ~nAg~~~~~-~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~  188 (286)
T 3uve_A          110 ANAGIGNGG-DTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGGLKAYPHTGHYVAAKHGVVGL  188 (286)
T ss_dssp             ECCCCCCCC-SCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHH
T ss_pred             ECCcccCCC-CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhhccCCCCccHHHHHHHHHHHH
Confidence            999987651 34888999999999999998                  36999999999999999999999999999999


Q ss_pred             HHHHHHHhcCCCeEEEEEecCcccCcccch
Q 042200          124 MKNLCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       124 ~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +++|+.|++++||+||+|+||++.|++...
T Consensus       189 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~~  218 (286)
T 3uve_A          189 MRAFGVELGQHMIRVNSVHPTHVKTPMLHN  218 (286)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESSBSSTTTSS
T ss_pred             HHHHHHHhcccCeEEEEEecCcccCCcccc
Confidence            999999999999999999999999998753

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=99.97  E-value=4.4e-31  Score=198.24  Aligned_cols=174  Identities=17%  Similarity=0.086  Sum_probs=148.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++...+++.++.+|++|.+++++++++  ..++++|+||||||....  .++.+.+
T Consensus        48 ~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  125 (276)
T 2b4q_A           48 GLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLDILVNNAGTSWG--AALESYP  125 (276)
T ss_dssp             HHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCC--CCTTSCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcccCC
Confidence            367899999999999988888877775434688999999999999999998  678899999999998766  7788889


Q ss_pred             HHHHHHhhheeec-----------------c----eeEEEeccccccccCccch-hhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           79 NEKVKRVMIMVVF-----------------L----GVLLFTANLATETIGEALY-DYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~----~~iv~iss~~~~~~~~~~~-~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      .++|+..+++|+.                 .    ++||++||.++..+.+... .|+++|++++.|+++++.+++++||
T Consensus       126 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gI  205 (276)
T 2b4q_A          126 VSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGISAMGEQAYAYGPSKAALHQLSRMLAKELVGEHI  205 (276)
T ss_dssp             SHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGTCCCCCSCTTHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHcCCCCCCccccHHHHHHHHHHHHHHHHHhcccCe
Confidence            9999999999998                 2    8999999999998888888 9999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHH--HhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLY--ASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~e  181 (181)
                      +||+|+||++.|++.....+.   ..+.+..  ..  |++|+++|+|
T Consensus       206 ~vn~v~PG~v~T~~~~~~~~~---~~~~~~~~~~~--p~~r~~~p~d  247 (276)
T 2b4q_A          206 NVNVIAPGRFPSRMTRHIAND---PQALEADSASI--PMGRWGRPEE  247 (276)
T ss_dssp             EEEEEEECCCCSTTTHHHHHC---HHHHHHHHHTS--TTSSCCCHHH
T ss_pred             EEEEEEeccCcCcchhhcchh---HHHHHHhhcCC--CCCCcCCHHH
Confidence            999999999999987654321   2233333  34  7899998875

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=99.97  E-value=4.8e-31  Score=200.14  Aligned_cols=152  Identities=25%  Similarity=0.328  Sum_probs=135.0

Q ss_pred             CcccCCCEEEEeecc------------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccc
Q 042200            1 VFIQHRAKVIIADVQ------------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAG   65 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag   65 (181)
                      +|+++|++|++++|+            .+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||
T Consensus        47 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg  126 (299)
T 3t7c_A           47 TLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAA  126 (299)
T ss_dssp             HHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            378999999999987            67777766665433 5799999999999999999998  77899999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHH
Q 042200           66 IISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~l  127 (181)
                      ..... ..+.+.+.++|+..+++|+.                  .|+||++||.++..+.++...|++||+++++|+++|
T Consensus       127 ~~~~~-~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  205 (299)
T 3t7c_A          127 LASEG-TRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGGLRGAENIGNYIASKHGLHGLMRTM  205 (299)
T ss_dssp             CCCCC-CCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHH
T ss_pred             CCCCC-CchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCCCCcchHHHHHHHHHHHHHHH
Confidence            87651 34788999999999999998                  479999999999999999999999999999999999


Q ss_pred             HHHhcCCCeEEEEEecCcccCcccch
Q 042200          128 CVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +.|++++||+||+|+||+++|++..+
T Consensus       206 a~e~~~~gI~vn~v~PG~v~T~~~~~  231 (299)
T 3t7c_A          206 ALELGPRNIRVNIVCPSSVATPMLLN  231 (299)
T ss_dssp             HHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             HHHhcccCcEEEEEecCCccCccccc
Confidence            99999999999999999999998754

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=99.97  E-value=4.5e-31  Score=196.51  Aligned_cols=176  Identities=18%  Similarity=0.238  Sum_probs=140.7

Q ss_pred             cccCCCEEEEeecchHH-HHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDL-CRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~-~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+. +++..+++..  ..++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        24 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~  101 (260)
T 1x1t_A           24 LAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIED  101 (260)
T ss_dssp             HHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--CCGGG
T ss_pred             HHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhh
Confidence            67899999999999877 7766665532  13688999999999999999998  778899999999998765  77888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|
T Consensus       102 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  181 (260)
T 1x1t_A          102 FPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITAN  181 (260)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCCCCCchHHHHHHHHHHHHHHHHHHhccCCEEEE
Confidence            999999999999998                 489999999999999899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCC--------ChHHHHHH-HHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI--------DKKTFKEL-LYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.......        .++..+.+ ....  |++|+++|+|
T Consensus       182 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~d  230 (260)
T 1x1t_A          182 AICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ--PSLQFVTPEQ  230 (260)
T ss_dssp             EEEECCBCC------------------------CHHHHC--TTCCCBCHHH
T ss_pred             EEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccC--CCCCCcCHHH
Confidence            999999999986553211        01222333 3344  7899998875

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.97  E-value=1.2e-31  Score=201.59  Aligned_cols=151  Identities=23%  Similarity=0.302  Sum_probs=136.7

Q ss_pred             CcccCCCEEEEeec-------------chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcc
Q 042200            1 VFIQHRAKVIIADV-------------QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNA   64 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-------------~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~a   64 (181)
                      +|+++|++|++++|             +.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+|||||
T Consensus        34 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnA  113 (280)
T 3pgx_A           34 RLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRELVADGMEQFGRLDVVVANA  113 (280)
T ss_dssp             HHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECC
T ss_pred             HHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            37889999999998             677777776666543 5799999999999999999998  7789999999999


Q ss_pred             cccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHH
Q 042200           65 GIISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        65 g~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~  126 (181)
                      |....  .++.+.+.++|++.+++|+.                  .|+||++||..+..+.++...|++||+++++|+++
T Consensus       114 g~~~~--~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~  191 (280)
T 3pgx_A          114 GVLSW--GRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAGLKATPGNGHYSASKHGLTALTNT  191 (280)
T ss_dssp             CCCCC--BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHH
T ss_pred             CCCCC--CCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhhccCCCCchhHHHHHHHHHHHHHH
Confidence            99876  78889999999999999998                  36899999999999999999999999999999999


Q ss_pred             HHHHhcCCCeEEEEEecCcccCcccch
Q 042200          127 LCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ++.+++++||+||+|+||++.|++...
T Consensus       192 la~e~~~~gi~vn~v~PG~v~t~~~~~  218 (280)
T 3pgx_A          192 LAIELGEYGIRVNSIHPYSVETPMIEP  218 (280)
T ss_dssp             HHHHHGGGTEEEEEEEECSBCSTTCCH
T ss_pred             HHHHhhhcCeEEEEEeeCcccCcccch
Confidence            999999999999999999999998653

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=99.97  E-value=5.1e-31  Score=196.78  Aligned_cols=177  Identities=16%  Similarity=0.151  Sum_probs=147.6

Q ss_pred             CcccCCCEEEEeecchHHHHH---HHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRA---LCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~   73 (181)
                      +|+++|++|++++|+....+.   ..++... .++.++.+|++|.+++++++++  .+++++|+||||||.....  ...
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~  106 (266)
T 3oig_A           28 SLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQVGVIHGIAHCIAFANKEELVGE  106 (266)
T ss_dssp             HHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSC
T ss_pred             HHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHHhCCeeEEEEccccccccccccc
Confidence            378899999999998643333   3332222 3689999999999999999998  7789999999999987520  166


Q ss_pred             cccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           74 TLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.+.++|+..+++|+.               .|+||++||.++..+.++...|++||+++++|+++|+.+++++||+|
T Consensus       107 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  186 (266)
T 3oig_A          107 YLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGELVMPNYNVMGVAKASLDASVKYLAADLGKENIRV  186 (266)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             hhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccccccCCCcchhHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            778899999999999988               57999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++...... .++..+.+....  |++|+.+|+|
T Consensus       187 ~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--~~~~~~~p~d  226 (266)
T 3oig_A          187 NSISAGPIRTLSAKGISD-FNSILKDIEERA--PLRRTTTPEE  226 (266)
T ss_dssp             EEEEECCCCSGGGTTCTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EEEecCcccccccccccc-hHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999998776533 345566666666  8899998875

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=99.97  E-value=1e-30  Score=196.73  Aligned_cols=175  Identities=22%  Similarity=0.170  Sum_probs=143.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc---
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL---   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~---   75 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|+++.+++++++++  .+++++|+||||||..... ..+.   
T Consensus        24 ~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~-~~~~~~~  100 (281)
T 3zv4_A           24 RFVAEGARVAVLDKSAERLRELEVAHGG--NAVGVVGDVRSLQDQKRAAERCLAAFGKIDTLIPNAGIWDYS-TALADLP  100 (281)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHTBT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTT-CCGGGSC
T ss_pred             HHHHCcCEEEEEeCCHHHHHHHHHHcCC--cEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCccc-cccccCC
Confidence            3788999999999999999888777654  799999999999999999998  7789999999999986541 2222   


Q ss_pred             -cCCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 -DTDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 -~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                       +.+.+.|+..+++|+.                +|+||++||..+..+.++...|++||+++++|+++|+.+++++ |+|
T Consensus       101 ~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~-Irv  179 (281)
T 3zv4_A          101 EDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGFYPNGGGPLYTATKHAVVGLVRQMAFELAPH-VRV  179 (281)
T ss_dssp             TTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSSSSSCHHHHHHHHHHHHHHHHHHHHHTTT-SEE
T ss_pred             hhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-CEE
Confidence             3445779999999998                6799999999999999999999999999999999999999987 999


Q ss_pred             EEEecCcccCcccchhcCC-------ChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGI-------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.......       .....+.+....  |++|+++|+|
T Consensus       180 n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  227 (281)
T 3zv4_A          180 NGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVL--PIGRMPALEE  227 (281)
T ss_dssp             EEEEECSSCC--CCCTTCC--------CCHHHHHHHTC--TTSSCCCGGG
T ss_pred             EEEECCcCcCCcccccccccccccccchhHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999986543211       112334444455  8999999986

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=8.5e-31  Score=193.53  Aligned_cols=168  Identities=23%  Similarity=0.274  Sum_probs=145.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++    .+.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+.+.
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn~Ag~~~~--~~~~~~~~   98 (245)
T 1uls_A           25 FAKEGARLVACDIEEGPLREAAEAV----GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRD--NFHWKMPL   98 (245)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCGGGCCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHc----CCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            6789999999999998888776655    277889999999999999998  778999999999998766  77888999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|++.+++|+.                 .|+||++||.. ..+.+++..|+++|+++++|+++++.+++++||++|+|+
T Consensus        99 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~  177 (245)
T 1uls_A           99 EDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLA  177 (245)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hcCCCCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEE
Confidence            999999999998                 47999999988 888888999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++...+   .++..+.+....  |++|+++|+|
T Consensus       178 PG~v~t~~~~~~---~~~~~~~~~~~~--p~~~~~~~~d  211 (245)
T 1uls_A          178 PGFIETRMTAKV---PEKVREKAIAAT--PLGRAGKPLE  211 (245)
T ss_dssp             ECSBCCTTTSSS---CHHHHHHHHHTC--TTCSCBCHHH
T ss_pred             eCcCcCcchhhc---CHHHHHHHHhhC--CCCCCcCHHH
Confidence            999999986543   334444444444  7889888875

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=99.97  E-value=5e-31  Score=196.55  Aligned_cols=176  Identities=22%  Similarity=0.219  Sum_probs=147.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+++++..+++..  ..++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~  104 (263)
T 3ai3_A           27 FAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGGADILVNNAGTGSN--ETIMEA  104 (263)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCC--CCTTTC
T ss_pred             HHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            678999999999998888777666532  13688999999999999999998  678899999999998766  778888


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|+
T Consensus       105 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  184 (263)
T 3ai3_A          105 ADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPLWYEPIYNVTKAALMMFSKTLATEVIKDNIRVNC  184 (263)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCCCCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            99999999999988                 4899999999999988999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcC-------C-ChHHHHHHHHH-hhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMG-------I-DKKTFKELLYA-SANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~-------~-~~~~~~~~~~~-~~~~~~~~~~~~e  181 (181)
                      |+||++.|++......       . .++..+.+... .  |++|+++|+|
T Consensus       185 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~d  232 (263)
T 3ai3_A          185 INPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHA--PIKRFASPEE  232 (263)
T ss_dssp             EEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHC--TTCSCBCHHH
T ss_pred             EecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCC--CCCCCcCHHH
Confidence            9999999998654321       0 12233334333 4  7899998875

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=99.97  E-value=1.4e-31  Score=202.62  Aligned_cols=177  Identities=16%  Similarity=0.174  Sum_probs=145.8

Q ss_pred             CcccCCCEEEEeecc--hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQ--DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~--~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+  ....+...+.+... .++.++.+|++|.+++++++++  .+++++|+||||||..... ..+.
T Consensus        68 ~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~  146 (294)
T 3r3s_A           68 AYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGLDILALVAGKQTAI-PEIK  146 (294)
T ss_dssp             HHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCCC-SSGG
T ss_pred             HHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCC-CCcc
Confidence            378999999999987  23444443333222 4789999999999999999998  7789999999999986532 6788


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.+.++|+..+++|+.               .|+||++||..+..+.++...|+++|+++++|+++|+.|++++||+||+
T Consensus       147 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~  226 (294)
T 3r3s_A          147 DLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQPSPHLLDYAATKAAILNYSRGLAKQVAEKGIRVNI  226 (294)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccCCCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            8999999999999998               5799999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       227 v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--p~~r~~~p~d  264 (294)
T 3r3s_A          227 VAPGPIWTALQISGGQ-TQDKIPQFGQQT--PMKRAGQPAE  264 (294)
T ss_dssp             EEECSBCSHHHHTTTS-CGGGSTTTTTTS--TTSSCBCGGG
T ss_pred             EecCcCccccccccCC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998433211 334444444455  8899999986

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=99.97  E-value=1.1e-31  Score=198.95  Aligned_cols=151  Identities=19%  Similarity=0.186  Sum_probs=128.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC---C-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS---D-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+.+++++..+++..   . .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+ 
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~-  103 (250)
T 3nyw_A           27 LATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGAVDILVNAAAMFMD--GSL-  103 (250)
T ss_dssp             HHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCCEEEEEECCCCCCC--CCC-
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--CCC-
Confidence            678999999999999888887766532   1 4788999999999999999998  778999999999999766  666 


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+|
T Consensus       104 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v  183 (250)
T 3nyw_A          104 SEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGFADGGIYGSTKFALLGLAESLYRELAPLGIRV  183 (250)
T ss_dssp             SCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC-------CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhhcCcEE
Confidence            7788999999999998                 58999999999998777789999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhc
Q 042200          139 NSIAHIVSATPFFCNAM  155 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~  155 (181)
                      |+|+||++.|++.....
T Consensus       184 n~v~PG~v~T~~~~~~~  200 (250)
T 3nyw_A          184 TTLCPGWVNTDMAKKAG  200 (250)
T ss_dssp             EEEEESSBCSHHHHHTT
T ss_pred             EEEecCcccCchhhhcC
Confidence            99999999999876543

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=99.97  E-value=3.9e-31  Score=195.78  Aligned_cols=172  Identities=24%  Similarity=0.260  Sum_probs=136.1

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+. +.+++..++...  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~  102 (249)
T 2ew8_A           27 FAVEGADIAIADLVPAPEAEAAIRNLGR--RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPL--IPFDELT  102 (249)
T ss_dssp             HHHTTCEEEEEESSCCHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCC
T ss_pred             HHHCCCEEEEEcCCchhHHHHHHHhcCC--cEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCC
Confidence            678999999999998 777654444433  788999999999999999998  678899999999998766  7788899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|+|
T Consensus       103 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v  182 (249)
T 2ew8_A          103 FEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAI  182 (249)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCCCCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEE
Confidence            9999999999997                 48999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccc-hhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFC-NAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.. ......++..+.+.  .  |++|+++|+|
T Consensus       183 ~Pg~v~t~~~~~~~~~~~~~~~~~~~--~--~~~~~~~p~d  219 (249)
T 2ew8_A          183 APSLVRTATTEASALSAMFDVLPNML--Q--AIPRLQVPLD  219 (249)
T ss_dssp             EECCC------------------CTT--S--SSCSCCCTHH
T ss_pred             ecCcCcCccchhccccchhhHHHHhh--C--ccCCCCCHHH
Confidence            99999999865 32211011111111  3  7788888875

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=99.97  E-value=6.1e-31  Score=196.53  Aligned_cols=177  Identities=24%  Similarity=0.280  Sum_probs=146.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++..+++..   ..++.++.+|++|.+++++++++  .+++++|+||||||..... .++.
T Consensus        32 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~~  110 (267)
T 1iy8_A           32 RLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-NPTE  110 (267)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC-BCGG
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC-CCcc
Confidence            3678999999999998888776665521   13688999999999999999998  7788999999999986431 4567


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+|
T Consensus       111 ~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  190 (267)
T 1iy8_A          111 SFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI  190 (267)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhcCeEE
Confidence            7899999999999986                 48999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchh--cCCChHHHH----HHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNA--MGIDKKTFK----ELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++....  .. .++..+    .+....  |++|+++|+|
T Consensus       191 ~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~~~~~~~~--p~~r~~~~~d  236 (267)
T 1iy8_A          191 NAIAPGAIWTPMVENSMKQL-DPENPRKAAEEFIQVN--PSKRYGEAPE  236 (267)
T ss_dssp             EEEEECSBCSHHHHHHHHHH-CTTCHHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEEEeCCCcCcchhcccccc-ChhhhhhHHHHHhccC--CCCCCcCHHH
Confidence            9999999999987653  10 112222    333344  7899998875

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=99.97  E-value=4.8e-31  Score=196.87  Aligned_cols=151  Identities=17%  Similarity=0.210  Sum_probs=130.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+++++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        23 ~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~~~~~~  100 (264)
T 3tfo_A           23 ELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPL--SPLAAV  100 (264)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            37889999999999999988887777443 5789999999999999999998  778999999999999876  788899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||.++..+.++...|++||+++++|+++|+.++ + ||+||+
T Consensus       101 ~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~-~-gIrvn~  178 (264)
T 3tfo_A          101 KVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES-T-NIRVTC  178 (264)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHC-S-SEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHcccCCCChhHHHHHHHHHHHHHHHHHhC-C-CCEEEE
Confidence            99999999999998                 5899999999999999999999999999999999999998 5 999999


Q ss_pred             EecCcccCcccchhc
Q 042200          141 IAHIVSATPFFCNAM  155 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~  155 (181)
                      |+||+++|++.....
T Consensus       179 v~PG~v~T~~~~~~~  193 (264)
T 3tfo_A          179 VNPGVVESELAGTIT  193 (264)
T ss_dssp             EEECCC---------
T ss_pred             EecCCCcCccccccc
Confidence            999999999876643

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=7.7e-31  Score=196.94  Aligned_cols=176  Identities=24%  Similarity=0.268  Sum_probs=136.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHc---CCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEF---DSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~---~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+.+++++..+++   ... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.
T Consensus        26 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~  103 (278)
T 1spx_A           26 FAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIP--DSQS  103 (278)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC----------
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--cccc
Confidence            6789999999999998888877766   322 4788999999999999999998  778899999999998765  5666


Q ss_pred             cC----CHHHHHHhhheeec----------------ceeEEEeccccc-cccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           76 DT----DNEKVKRVMIMVVF----------------LGVLLFTANLAT-ETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        76 ~~----~~~~~~~~~~~n~~----------------~~~iv~iss~~~-~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +.    +.++|+..+++|+.                +|+||++||..+ ..+.++...|+++|++++.|+++++.+++++
T Consensus       104 ~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  183 (278)
T 1spx_A          104 KTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQH  183 (278)
T ss_dssp             -----CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             cccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEecccccccCCCCccHHHHHHHHHHHHHHHHHHHHHhc
Confidence            66    89999999999998                489999999988 8888889999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcCCChHH------HHHHHHHhhcccccccccCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMGIDKKT------FKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++|+|+||++.|++........+..      .+.+....  |++|+++|+|
T Consensus       184 gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~d  234 (278)
T 1spx_A          184 GIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV--PAGVMGQPQD  234 (278)
T ss_dssp             TCEEEEEEECCBCCCC--------------HHHHHHHHHHC--TTSSCBCHHH
T ss_pred             CcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcC--CCcCCCCHHH
Confidence            999999999999999865432111111      33344444  7899988875

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=4.6e-31  Score=196.87  Aligned_cols=171  Identities=22%  Similarity=0.276  Sum_probs=145.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  100 (263)
T 2a4k_A           25 LFAREGASLVAVDREERLLAEAVAALEA--EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS--ALSWNLP  100 (263)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHTCCS--SEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTT--TC----C
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhcC--ceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCC--CChhhCC
Confidence            3678999999999999988888777764  788999999999999999998  778999999999998766  6778889


Q ss_pred             HHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           79 NEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        79 ~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      .++|+..+++|+.               .|+||++||..+. +.++...|+++|+++++|+++++.+++++||++|+|+|
T Consensus       101 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~-~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~P  179 (263)
T 2a4k_A          101 LEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL-GAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLP  179 (263)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC-CHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc-CCCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEe
Confidence            9999999999998               2799999999888 77888899999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |++.|++....   .++..+.+....  |++|+++|+|
T Consensus       180 G~v~t~~~~~~---~~~~~~~~~~~~--p~~~~~~p~d  212 (263)
T 2a4k_A          180 GLIQTPMTAGL---PPWAWEQEVGAS--PLGRAGRPEE  212 (263)
T ss_dssp             CSBCCGGGTTS---CHHHHHHHHHTS--TTCSCBCHHH
T ss_pred             CcCcCchhhhc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999987653   334444444444  7899988875

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=99.97  E-value=1.8e-31  Score=200.83  Aligned_cols=154  Identities=20%  Similarity=0.240  Sum_probs=132.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++...  ..+.++.+|++|.+++++++++  .+++++|+||||||..... .++.+
T Consensus        52 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~-~~~~~  130 (281)
T 4dry_A           52 ALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFARLDLLVNNAGSNVPP-VPLEE  130 (281)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC-CCGGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CCccc
Confidence            36789999999999998888877766432  2358999999999999999998  7789999999999986432 57888


Q ss_pred             CCHHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           77 TDNEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.++|+..+++|+.                   .|+||++||..+..+.++...|++||+++++|+++++.|++++||+
T Consensus       131 ~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~  210 (281)
T 4dry_A          131 VTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQTPRPNSAPYTATKHAITGLTKSTALDGRMHDIA  210 (281)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCCCCCCChhHHHHHHHHHHHHHHHHHHhcccCeE
Confidence            999999999999998                   2799999999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhc
Q 042200          138 VNSIAHIVSATPFFCNAM  155 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~  155 (181)
                      ||+|+||++.|++.....
T Consensus       211 vn~v~PG~v~T~~~~~~~  228 (281)
T 4dry_A          211 CGQIDIGNAATDMTARMS  228 (281)
T ss_dssp             EEEEEEECBCC-------
T ss_pred             EEEEEECcCcChhhhhhc
Confidence            999999999999876553

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=99.97  E-value=4.4e-31  Score=197.53  Aligned_cols=174  Identities=17%  Similarity=0.181  Sum_probs=144.0

Q ss_pred             CcccCCCEEEEee-cchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIAD-VQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++ |+.+..+....++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        44 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~--~~~~~  121 (269)
T 3gk3_A           44 RLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVDVLINNAGITRD--ATFMK  121 (269)
T ss_dssp             HHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--BCTTT
T ss_pred             HHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--cchhh
Confidence            3789999999998 5566666655555332 5799999999999999999998  778899999999999876  77888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.+++..|+++|+++++|+++++.+++++||+||
T Consensus       122 ~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~  201 (269)
T 3gk3_A          122 MTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRGAFGQANYASAKAGIHGFTKTLALETAKRGITVN  201 (269)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccCCCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEE
Confidence            999999999999998                 489999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHH-HHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFK-ELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|++.....+   +..+ .+....  |++|+++|+|
T Consensus       202 ~v~PG~v~T~~~~~~~~---~~~~~~~~~~~--~~~~~~~p~d  239 (269)
T 3gk3_A          202 TVSPGYLATAMVEAVPQ---DVLEAKILPQI--PVGRLGRPDE  239 (269)
T ss_dssp             EEEECSBCCTTTTC----------CCSGGGC--TTSSCBCHHH
T ss_pred             EEecCcccchhhhhhch---hHHHHHhhhcC--CcCCccCHHH
Confidence            99999999998766532   2222 223333  7788887764

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=99.97  E-value=1.2e-30  Score=195.35  Aligned_cols=175  Identities=25%  Similarity=0.366  Sum_probs=147.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++.   .+.++.+|++|.+++++++++  .+++++|+||||||..... .++.+.+
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~-~~~~~~~  103 (270)
T 1yde_A           28 AFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETS  103 (270)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCGGGCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHhc---CCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC-CCcccCC
Confidence            368899999999999988887777664   488899999999999999998  7789999999999986532 5677889


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|+..+++|+.                .|+||++||..+..+.+....|+++|+++++|+++++.+++++||++|+|+
T Consensus       104 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~  183 (270)
T 1yde_A          104 AQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS  183 (270)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCCCCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEE
Confidence            9999999999998                489999999999989899999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChH---HHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKK---TFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++........++   .........  |++|+++|+|
T Consensus       184 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  223 (270)
T 1yde_A          184 PGNIWTPLWEELAALMPDPRASIREGMLAQ--PLGRMGQPAE  223 (270)
T ss_dssp             ECSBCCHHHHHHHTTSSSHHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             eCccccchhhhhhhcccchHHHHHHHhhcC--CCCCCcCHHH
Confidence            999999987654322111   122222334  8899999875

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=8.6e-31  Score=196.99  Aligned_cols=176  Identities=18%  Similarity=0.222  Sum_probs=145.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-C---ceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCC--
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-E---LISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRT--   73 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~---~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~--   73 (181)
                      |+++|++|++++|+.+++++..+++... .   ++.++.+|++|.+++++++++  .+++++|+||||||....  .+  
T Consensus        26 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~  103 (280)
T 1xkq_A           26 FAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIP--DAFG  103 (280)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CTTC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCCC
Confidence            6789999999999998888877766443 2   689999999999999999998  678899999999998755  45  


Q ss_pred             --cccCCHHHHHHhhheeec----------------ceeEEEeccccccccC-ccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           74 --TLDTDNEKVKRVMIMVVF----------------LGVLLFTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        74 --~~~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~-~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                        +.+.+.++|+..+++|+.                +|+||++||..+..+. ++...|+++|+++++|+++++.+++++
T Consensus       104 ~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~  183 (280)
T 1xkq_A          104 TTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKF  183 (280)
T ss_dssp             CCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             cccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCCCcEEEecCccccCCCCCcccHHHHHHHHHHHHHHHHHHHhccC
Confidence              778899999999999998                3899999999998887 888999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcCCC------hHHHHHHHHHhhcccccccccCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMGID------KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+||+|+||++.|++........      ++..+.+....  |++|+++|+|
T Consensus       184 gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~ped  234 (280)
T 1xkq_A          184 GIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECI--PIGAAGKPEH  234 (280)
T ss_dssp             TCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC--TTSSCBCHHH
T ss_pred             CeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCC--CCCCCCCHHH
Confidence            999999999999999876542101      11112222223  7889988875

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=99.97  E-value=8.3e-31  Score=195.85  Aligned_cols=175  Identities=19%  Similarity=0.155  Sum_probs=139.3

Q ss_pred             CcccCCCEEEEeecchH---HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCC
Q 042200            1 VFIQHRAKVIIADVQDD---LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~   73 (181)
                      +|+++|++|++++|+..   .+++..++.   ..+.++.+|++|.+++++++++  .+++++|+||||||.....  ...
T Consensus        35 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~  111 (271)
T 3ek2_A           35 ACKREGAELAFTYVGDRFKDRITEFAAEF---GSELVFPCDVADDAQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGD  111 (271)
T ss_dssp             HHHHTTCEEEEEESSGGGHHHHHHHHHHT---TCCCEEECCTTCHHHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSC
T ss_pred             HHHHcCCCEEEEecchhhHHHHHHHHHHc---CCcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccccCc
Confidence            37889999999999843   233333332   3588999999999999999998  7789999999999986531  023


Q ss_pred             ccc-CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           74 TLD-TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        74 ~~~-~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +.+ .+.++|+..+++|+.               .|+||++||.++..+.+++..|+++|+++++|+++++.+++++||+
T Consensus       112 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  191 (271)
T 3ek2_A          112 FLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGAERAIPNYNTMGLAKAALEASVRYLAVSLGAKGVR  191 (271)
T ss_dssp             TTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             cccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccccccCCCCccchhHHHHHHHHHHHHHHHHHHhcCcE
Confidence            344 889999999999998               5799999999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       192 v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--~~~~~~~ped  232 (271)
T 3ek2_A          192 VNAISAGPIKTLAASGIKS-FGKILDFVESNS--PLKRNVTIEQ  232 (271)
T ss_dssp             EEEEEECCC-----CCCHH-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EEEEecCcccchhhhcccc-hHHHHHHHHhcC--CcCCCCCHHH
Confidence            9999999999998766432 345555556666  8899999875

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=99.97  E-value=9.4e-31  Score=197.84  Aligned_cols=171  Identities=16%  Similarity=0.096  Sum_probs=145.2

Q ss_pred             cccCCCEEEEee-cchHHHHHHHhHcC-C-CCceEEEeeecCChh-----------------HHHHHHHh--cccCCccE
Q 042200            2 FIQHRAKVIIAD-VQDDLCRALCKEFD-S-DELISYVCCNVTIDS-----------------DVKNVFDF--TKFGKLDI   59 (181)
Q Consensus         2 l~~~G~~Vv~~~-r~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~-----------------~i~~~~~~--~~~~~id~   59 (181)
                      |+++|++|++++ |+.+.+++..+++. . ..++.++.+|+++.+                 ++.+++++  .+++++|+
T Consensus        29 la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~  108 (291)
T 1e7w_A           29 LHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDV  108 (291)
T ss_dssp             HHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             HHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCE
Confidence            678999999999 99888887777663 1 147899999999999                 99999998  77889999


Q ss_pred             EEEcccccCCCCCCcccCC--------------HHHHHHhhheeec----------------c-------eeEEEecccc
Q 042200           60 MFNNAGIISNMDRTTLDTD--------------NEKVKRVMIMVVF----------------L-------GVLLFTANLA  102 (181)
Q Consensus        60 vi~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~----------------~-------~~iv~iss~~  102 (181)
                      ||||||....  .++.+.+              .++|+..+++|+.                .       |+||++||..
T Consensus       109 lvnnAg~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~  186 (291)
T 1e7w_A          109 LVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM  186 (291)
T ss_dssp             EEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTT
T ss_pred             EEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechh
Confidence            9999998765  6777777              8999999999997                3       7899999999


Q ss_pred             ccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccc-cccccCC
Q 042200          103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKG-VVLKAAD  181 (181)
Q Consensus       103 ~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e  181 (181)
                      +..+.+++..|+++|+++++|+++|+.+++++||+||+|+||+++|++ . +   .++..+.+....  |++ |+++|+|
T Consensus       187 ~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~-~---~~~~~~~~~~~~--p~~~r~~~ped  259 (291)
T 1e7w_A          187 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-M---PPAVWEGHRSKV--PLYQRDSSAAE  259 (291)
T ss_dssp             TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G-S---CHHHHHHHHTTC--TTTTSCBCHHH
T ss_pred             hcCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c-C---CHHHHHHHHhhC--CCCCCCCCHHH
Confidence            999999999999999999999999999999999999999999999999 4 2   244444444444  778 9998875

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=99.97  E-value=6e-31  Score=196.99  Aligned_cols=174  Identities=18%  Similarity=0.186  Sum_probs=140.4

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+ .+..+...+.+... .++.++.+|+++.+++.+++++  .+++++|+||||||....  ..+.+
T Consensus        48 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~--~~~~~  125 (271)
T 4iin_A           48 TLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAGVVRD--KLAIK  125 (271)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--ccccc
Confidence            378899999999994 55555554444332 4799999999999999999998  677899999999999877  78888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||+||
T Consensus       126 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  205 (271)
T 4iin_A          126 MKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERGNMGQTNYSASKGGMIAMSKSFAYEGALRNIRFN  205 (271)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCCCCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence            999999999999998                 489999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.....+   +..+.+....  |++|+++|+|
T Consensus       206 ~v~PG~v~T~~~~~~~~---~~~~~~~~~~--~~~~~~~p~d  242 (271)
T 4iin_A          206 SVTPGFIETDMNANLKD---ELKADYVKNI--PLNRLGSAKE  242 (271)
T ss_dssp             EEEECSBCCC---------------CGGGC--TTCSCBCHHH
T ss_pred             EEEeCcccCCchhhhcH---HHHHHHHhcC--CcCCCcCHHH
Confidence            99999999998766532   2333333344  7788888764

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=99.97  E-value=9.8e-31  Score=196.21  Aligned_cols=176  Identities=14%  Similarity=0.145  Sum_probs=142.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~~   76 (181)
                      |+++|++|++++|+.+ .++..+++... +.+.++.+|+++.+++++++++  .+++++|+||||||.....  ..++.+
T Consensus        28 l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~  106 (275)
T 2pd4_A           28 CFNQGATLAFTYLNES-LEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLE  106 (275)
T ss_dssp             HHTTTCEEEEEESSTT-THHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGG
T ss_pred             HHHCCCEEEEEeCCHH-HHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCccccCCCCccc
Confidence            6889999999999875 22222322111 2478899999999999999998  7788999999999986420  145678


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .|+||++||.++..+.++...|+++|+++++|+++++.+++++||+||+|
T Consensus       107 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v  186 (275)
T 2pd4_A          107 TSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNAL  186 (275)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhcCCCCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            899999999999998               47999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       187 ~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~~~~~p~d  223 (275)
T 2pd4_A          187 SAGPIRTLASSGIAD-FRMILKWNEINA--PLRKNVSLEE  223 (275)
T ss_dssp             EECCCCCTTGGGSTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             eeCccccchhhhccc-cHHHHHHHHhcC--CcCCCCCHHH
Confidence            999999998755321 234444455555  8899998875

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=99.97  E-value=3.2e-31  Score=196.74  Aligned_cols=149  Identities=30%  Similarity=0.359  Sum_probs=135.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++..  ++.++.+|+++.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~  100 (254)
T 1hdc_A           25 AVAAGARVVLADVLDEEGAATARELGD--AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG--MFLETESV  100 (254)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHTTGG--GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--SCGGGSCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhCC--ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            678999999999999888887776643  688999999999999999998  678899999999998766  77888999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+|+
T Consensus       101 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~  180 (254)
T 1hdc_A          101 ERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVH  180 (254)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEe
Confidence            999999999987                 489999999999999899999999999999999999999999999999999


Q ss_pred             cCcccCcccchh
Q 042200          143 HIVSATPFFCNA  154 (181)
Q Consensus       143 Pg~v~t~~~~~~  154 (181)
                      ||++.|++....
T Consensus       181 Pg~v~t~~~~~~  192 (254)
T 1hdc_A          181 PGMTYTPMTAET  192 (254)
T ss_dssp             ECSBCCHHHHHH
T ss_pred             cccCcCcccccc
Confidence            999999986653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=99.97  E-value=1.6e-30  Score=195.32  Aligned_cols=176  Identities=19%  Similarity=0.239  Sum_probs=148.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        42 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~~~  119 (277)
T 2rhc_B           42 LGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG--GATAELA  119 (277)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCC--SCGGGCC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCC
Confidence            6789999999999998887776666322 4688999999999999999998  778899999999998766  7788899


Q ss_pred             HHHHHHhhheeec-----------c--------eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           79 NEKVKRVMIMVVF-----------L--------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------~--------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .++|+..+++|+.           .        |+||++||..+..+.++...|+++|++++.|+++++.+++++||++|
T Consensus       120 ~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  199 (277)
T 2rhc_B          120 DELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVN  199 (277)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccCCCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEE
Confidence            9999999999987           2        79999999999999899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcC-------CC-hHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMG-------ID-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++......       .. ++..+.+....  |++|+++|+|
T Consensus       200 ~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~d  247 (277)
T 2rhc_B          200 AVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV--PIGRYVQPSE  247 (277)
T ss_dssp             EEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             EEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998654321       00 23333444444  7899998875

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=99.97  E-value=9.8e-31  Score=195.70  Aligned_cols=167  Identities=23%  Similarity=0.315  Sum_probs=142.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+...         ..+..+.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        33 ~l~~~G~~V~~~~r~~~~~~---------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~  101 (269)
T 3vtz_A           33 ALVRYGAKVVSVSLDEKSDV---------NVSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILVNNAGIEQY--SPLHLTP  101 (269)
T ss_dssp             HHHHTTCEEEEEESCC--CT---------TSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGSC
T ss_pred             HHHHCCCEEEEEeCCchhcc---------CceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCC
Confidence            37889999999999876441         1467889999999999999998  778999999999999876  7888899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++.+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.++++ +|+||+|
T Consensus       102 ~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~i~vn~v  180 (269)
T 3vtz_A          102 TEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAATKNAAAYVTSKHALLGLTRSVAIDYAP-KIRCNAV  180 (269)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHTT-TEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCCCCChhHHHHHHHHHHHHHHHHHHhcC-CCEEEEE
Confidence            9999999999998                 589999999999999999999999999999999999999998 8999999


Q ss_pred             ecCcccCcccchhcC----CC----hHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMG----ID----KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++......    ..    ++..+.+....  |++|+++|+|
T Consensus       181 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  226 (269)
T 3vtz_A          181 CPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQH--PMGRIGRPEE  226 (269)
T ss_dssp             EECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             EECCCcCcchhhhhhccccccchhhHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999998755421    11    34445555555  8899999875

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=99.97  E-value=2.4e-30  Score=191.36  Aligned_cols=170  Identities=19%  Similarity=0.270  Sum_probs=133.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|+++.+++.+++++  ++++|+||||||....  ..+.+.+.+
T Consensus        33 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~--~~~id~li~~Ag~~~~--~~~~~~~~~  106 (249)
T 3f9i_A           33 LLHKLGSKVIISGSNEEKLKSLGNALKD--NYTIEVCNLANKEECSNLISK--TSNLDILVCNAGITSD--TLAIRMKDQ  106 (249)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCS--SEEEEECCTTSHHHHHHHHHT--CSCCSEEEECCC---------------
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHhcc--CccEEEcCCCCHHHHHHHHHh--cCCCCEEEECCCCCCC--CccccCCHH
Confidence            3688999999999999999988888876  789999999999999999984  5679999999998876  677778889


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      +|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+|+|
T Consensus       107 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~P  186 (249)
T 3f9i_A          107 DFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGNPGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAP  186 (249)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCSCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEec
Confidence            99999999988                 5799999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |++.|++....   .++..+.+....  |++|+++|+|
T Consensus       187 G~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  219 (249)
T 3f9i_A          187 GFIKSDMTDKL---NEKQREAIVQKI--PLGTYGIPED  219 (249)
T ss_dssp             CCBC------C---CHHHHHHHHHHC--TTCSCBCHHH
T ss_pred             CccccCccccc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999987665   445566666666  7899888864

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.97  E-value=9.1e-31  Score=198.46  Aligned_cols=176  Identities=21%  Similarity=0.192  Sum_probs=145.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-C---ceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCC--
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-E---LISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRT--   73 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~---~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~--   73 (181)
                      |+++|++|++++|+.+++++..+++... .   ++.++.+|++|.+++++++++  .+++++|+||||||....  .+  
T Consensus        46 L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~--~~~~  123 (297)
T 1xhl_A           46 FAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLA--DGTA  123 (297)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CSCC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCcC--CCCc
Confidence            6789999999999998888777666432 2   689999999999999999998  778899999999998765  55  


Q ss_pred             cccCCHHHHHHhhheeec----------------ceeEEEeccccccccC-ccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           74 TLDTDNEKVKRVMIMVVF----------------LGVLLFTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~-~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.+.++|+..+++|+.                +|+||++||..+..+. ++...|+++|+++++|+++++.+++++||
T Consensus       124 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gI  203 (297)
T 1xhl_A          124 NTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGV  203 (297)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTC
T ss_pred             cccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCEEEEEcCchhccCCCCCcchHHHHHHHHHHHHHHHHHHhcccCe
Confidence            788999999999999998                3799999999998887 88999999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCC------hHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGID------KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+|+||++.|++........      ++..+.+....  |++|+++|+|
T Consensus       204 ~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  252 (297)
T 1xhl_A          204 RVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECI--PVGHCGKPEE  252 (297)
T ss_dssp             EEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTC--TTSSCBCHHH
T ss_pred             EEEEEeeCCCcCccccccccccccccchHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999999876542111      11112222223  7889988875

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=99.97  E-value=2e-30  Score=195.31  Aligned_cols=176  Identities=20%  Similarity=0.220  Sum_probs=144.7

Q ss_pred             cccCCCEEEEeecchHH-HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDL-CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+. .+...+++... .++.++.+|+++.+++.+++++  ..++++|+||||||....  ..+.+.
T Consensus        49 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~~  126 (283)
T 1g0o_A           49 LGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSF--GHVKDV  126 (283)
T ss_dssp             HHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccC
Confidence            67899999999998653 44444444222 3788999999999999999998  678899999999998766  778889


Q ss_pred             CHHHHHHhhheeec---------------ceeEEEeccccccccCcc-chhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEA-LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~-~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.++|+..+++|+.               .|+||++||..+..+.++ ...|+++|+++++|+++++.+++++||+||+|
T Consensus       127 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v  206 (283)
T 1g0o_A          127 TPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVV  206 (283)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCCCCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEE
Confidence            99999999999998               479999999998887664 88999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCC--------ChHHHHHHHH--HhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGI--------DKKTFKELLY--ASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.......        .++..+.+..  ..  |++|+++|+|
T Consensus       207 ~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  254 (283)
T 1g0o_A          207 APGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWS--PLRRVGLPID  254 (283)
T ss_dssp             EECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSC--TTCSCBCHHH
T ss_pred             ecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCC--CCCCCcCHHH
Confidence            9999999986654211        2344444444  34  8899999875

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=99.97  E-value=3.1e-30  Score=191.21  Aligned_cols=152  Identities=20%  Similarity=0.289  Sum_probs=135.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeec--CChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNV--TIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~--~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|+.+.+++..+++...  .++.++.+|+  ++.+++++++++  .+++++|+||||||..... .++
T Consensus        31 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~  109 (252)
T 3f1l_A           31 TYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNYPRLDGVLHNAGLLGDV-CPM  109 (252)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHCSCCSEEEECCCCCCCC-SCT
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCC-CCc
Confidence            37889999999999999888877766432  3688999999  999999999998  7789999999999986432 678


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.+.++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++|+.+++++ |+
T Consensus       110 ~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~l~~~la~e~~~~-ir  188 (252)
T 3f1l_A          110 SEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGRQGRANWGAYAASKFATEGMMQVLADEYQQR-LR  188 (252)
T ss_dssp             TTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTT-CE
T ss_pred             ccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhccCCCCCchhHHHHHHHHHHHHHHHHHhcCC-cE
Confidence            88999999999999998                 5899999999999999999999999999999999999999987 99


Q ss_pred             EEEEecCcccCcccchh
Q 042200          138 VNSIAHIVSATPFFCNA  154 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~  154 (181)
                      ||+|+||+++|++....
T Consensus       189 vn~v~PG~v~t~~~~~~  205 (252)
T 3f1l_A          189 VNCINPGGTRTAMRASA  205 (252)
T ss_dssp             EEEEECCSBSSHHHHHH
T ss_pred             EEEEecCcccCchhhhh
Confidence            99999999999986554

>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*

Probab=99.97  E-value=2.2e-30  Score=193.54  Aligned_cols=173  Identities=15%  Similarity=0.138  Sum_probs=149.5

Q ss_pred             CcccCCCEEEE-eecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVII-ADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~-~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++ ..|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        45 ~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~nAg~~~~--~~~~~  122 (267)
T 4iiu_A           45 QLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWYGVVSNAGIARD--AAFPA  122 (267)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEEEECCCCCCC--Ccccc
Confidence            37889999866 556777777776666433 5799999999999999999998  778899999999999877  78888


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+++|+.                  .++||++||..+..+.+++..|+++|+++++|+++++.+++++||++
T Consensus       123 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v  202 (267)
T 4iiu_A          123 LSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMGNRGQVNYSAAKAGIIGATKALAIELAKRKITV  202 (267)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccCCCCCchhHHHHHHHHHHHHHHHHHHhhcCeEE
Confidence            999999999999987                  58999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+||+++|++....    ++..+......  |++|+++|+|
T Consensus       203 ~~v~PG~v~t~~~~~~----~~~~~~~~~~~--p~~~~~~~ed  239 (267)
T 4iiu_A          203 NCIAPGLIDTGMIEME----ESALKEAMSMI--PMKRMGQAEE  239 (267)
T ss_dssp             EEEEECSBCSTTCCCC----HHHHHHHHHTC--TTCSCBCHHH
T ss_pred             EEEEEeeecCCccccc----HHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999986542    45566666666  8899998875

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=99.97  E-value=2.9e-30  Score=194.81  Aligned_cols=153  Identities=23%  Similarity=0.221  Sum_probs=136.6

Q ss_pred             cccCCC---EEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCC
Q 042200            2 FIQHRA---KVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         2 l~~~G~---~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      |+++|+   +|++++|+.+.+++..+++..   ..++.++.||++|.+++++++++  .+++++|+||||||..... .+
T Consensus        53 l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~-~~  131 (287)
T 3rku_A           53 YLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQEFKDIDILVNNAGKALGS-DR  131 (287)
T ss_dssp             HHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCGGGCSCCEEEECCCCCCCC-CC
T ss_pred             HHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCCC-CC
Confidence            567777   999999999988888776632   24789999999999999999999  7789999999999986532 67


Q ss_pred             cccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           74 TLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.+.++|+..+++|+.                 .|+||++||.++..+.++...|+++|+++++|+++|+.|++++||
T Consensus       132 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI  211 (287)
T 3rku_A          132 VGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGRDAYPTGSIYCASKFAVGAFTDSLRKELINTKI  211 (287)
T ss_dssp             TTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSC
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCC
Confidence            888999999999999998                 589999999999999999999999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhc
Q 042200          137 RVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~  155 (181)
                      +||+|+||+|+|++.....
T Consensus       212 rvn~v~PG~v~T~~~~~~~  230 (287)
T 3rku_A          212 RVILIAPGLVETEFSLVRY  230 (287)
T ss_dssp             EEEEEEESCEESSHHHHHT
T ss_pred             EEEEEeCCcCcCccccccc
Confidence            9999999999999865443

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=99.97  E-value=3.9e-30  Score=192.39  Aligned_cols=175  Identities=13%  Similarity=0.108  Sum_probs=142.0

Q ss_pred             cccCCCEEEEeecchHH-HHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccC---CccEEEEcccccCCC---CC
Q 042200            2 FIQHRAKVIIADVQDDL-CRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFG---KLDIMFNNAGIISNM---DR   72 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~---~id~vi~~ag~~~~~---~~   72 (181)
                      |+++|++|++++|+.++ +++..+++..  ++.++.+|++|.+++++++++  .+++   ++|+||||||.....   ..
T Consensus        29 l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~  106 (269)
T 2h7i_A           29 AQEQGAQLVLTGFDRLRLIQRITDRLPA--KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGIN  106 (269)
T ss_dssp             HHHTTCEEEEEECSCHHHHHHHHTTSSS--CCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTS
T ss_pred             HHHCCCEEEEEecChHHHHHHHHHhcCC--CceEEEccCCCHHHHHHHHHHHHHHhCCCCCceEEEECCccCcccccccc
Confidence            67899999999998765 4666555543  678899999999999999998  6778   999999999986510   15


Q ss_pred             CcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           73 TTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      ++.+.+.++|+..+++|+.               .|+||++||..+ .+.+.+..|+++|+++++|+++++.+++++||+
T Consensus       107 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~-~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~  185 (269)
T 2h7i_A          107 PFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS-RAMPAYNWMTVAKSALESVNRFVAREAGKYGVR  185 (269)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS-SCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             ccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc-cccCchHHHHHHHHHHHHHHHHHHHHhcccCcE
Confidence            6778899999999999998               479999999765 677888999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCC--ChH-------HHHHHHHHhhcccc-cccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGI--DKK-------TFKELLYASANLKG-VVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~--~~~-------~~~~~~~~~~~~~~-~~~~~~e  181 (181)
                      ||+|+||+++|++.......  .++       ..+.+....  |++ |+++|+|
T Consensus       186 vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~rr~~~p~d  237 (269)
T 2h7i_A          186 SNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA--PIGWNMKDATP  237 (269)
T ss_dssp             EEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC--TTCCCTTCCHH
T ss_pred             EEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccC--CcccCCCCHHH
Confidence            99999999999987654211  121       122333444  888 6999975

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=7.6e-31  Score=197.81  Aligned_cols=153  Identities=17%  Similarity=0.110  Sum_probs=132.4

Q ss_pred             CcccCCCEEEEeecchH-------HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIADVQDD-------LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-------~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~   70 (181)
                      +|+++|++|++++|+.+       .+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||.... 
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~-  106 (285)
T 3sc4_A           28 RVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKTVEQFGGIDICVNNASAINL-  106 (285)
T ss_dssp             HHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC-
T ss_pred             HHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-
Confidence            37899999999999865       344444443221 4799999999999999999998  778999999999999876 


Q ss_pred             CCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccC-ccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIG-EALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~-~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                       .++.+.+.++|++.+++|+.                 .|+||++||..+..+. ++...|++||+++++|+++|+.+++
T Consensus       107 -~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~  185 (285)
T 3sc4_A          107 -GSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIRLEPKWLRPTPYMMAKYGMTLCALGIAEELR  185 (285)
T ss_dssp             -CCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCCCSGGGSCSHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             -CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhccCCCCCCchHHHHHHHHHHHHHHHHHHhc
Confidence             78889999999999999998                 4799999999888876 7789999999999999999999999


Q ss_pred             CCCeEEEEEecC-cccCcccchhc
Q 042200          133 QYDIRVNSIAHI-VSATPFFCNAM  155 (181)
Q Consensus       133 ~~~i~v~~i~Pg-~v~t~~~~~~~  155 (181)
                      ++||+||+|+|| .+.|++.....
T Consensus       186 ~~gI~vn~v~PG~~v~t~~~~~~~  209 (285)
T 3sc4_A          186 DAGIASNTLWPRTTVATAAVQNLL  209 (285)
T ss_dssp             GGTCEEEEEECSSCBCCHHHHHHH
T ss_pred             ccCcEEEEEeCCCccccHHHHhhc
Confidence            999999999999 79999866543

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=99.97  E-value=1.1e-30  Score=193.51  Aligned_cols=174  Identities=24%  Similarity=0.262  Sum_probs=116.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC-CCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM-DRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~-~~~~~~   76 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||..... ...+.+
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~  107 (253)
T 3qiv_A           28 ALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLT  107 (253)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTT
T ss_pred             HHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCccccc
Confidence            37889999999999999888887776443 5789999999999999999998  7778999999999984321 156677


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .++||++||..++   ++...|+++|+++++|+++++.+++++||++|
T Consensus       108 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~---~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  184 (253)
T 3qiv_A          108 IDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW---LYSNYYGLAKVGINGLTQQLSRELGGRNIRIN  184 (253)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------CCHHHHHHHHHHHHHHTTTTTEEEE
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc---CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEE
Confidence            899999999999998                 5889999998776   45678999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.....  .++..+.+.+..  |++|+++|+|
T Consensus       185 ~v~PG~v~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  222 (253)
T 3qiv_A          185 AIAPGPIDTEANRTTT--PKEMVDDIVKGL--PLSRMGTPDD  222 (253)
T ss_dssp             EEEC-----------------------------------CCH
T ss_pred             EEEecCCcccchhhcC--cHHHHHHHhccC--CCCCCCCHHH
Confidence            9999999999876543  234455555555  7889988875

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=99.97  E-value=1.9e-30  Score=193.65  Aligned_cols=174  Identities=14%  Similarity=0.126  Sum_probs=140.4

Q ss_pred             cccCCCEEEEeecch---HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCc
Q 042200            2 FIQHRAKVIIADVQD---DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~   74 (181)
                      |+++|++|++++|+.   +.+++..+...   ...++.+|++|.+++++++++  .+++++|+||||||.....  ..++
T Consensus        31 l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~  107 (265)
T 1qsg_A           31 MHREGAELAFTYQNDKLKGRVEEFAAQLG---SDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDY  107 (265)
T ss_dssp             HHHTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCH
T ss_pred             HHHCCCEEEEEcCcHHHHHHHHHHHHhcC---CcEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCc
Confidence            678999999999987   33333322222   347899999999999999998  7788999999999986420  0456


Q ss_pred             cc-CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           75 LD-TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        75 ~~-~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+ .+.++|+..+++|+.               .|+||++||..+..+.++...|+++|++++.|+++++.+++++||+|
T Consensus       108 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  187 (265)
T 1qsg_A          108 VNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRV  187 (265)
T ss_dssp             HHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred             cccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhhccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            66 889999999999998               47999999999999989999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       188 ~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~d  227 (265)
T 1qsg_A          188 NAISAGPIRTLAASGIKD-FRKMLAHCEAVT--PIRRTVTIED  227 (265)
T ss_dssp             EEEEECCCCCTTGGGSTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EEEEeCCCccchhhcccc-cHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999998654321 233344444455  7889988875

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=99.97  E-value=3.6e-30  Score=191.90  Aligned_cols=174  Identities=24%  Similarity=0.254  Sum_probs=147.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        32 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~~~~  107 (263)
T 3ak4_A           32 LDKAGATVAIADLDVMAAQAVVAGLEN--GGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAGVSTM--RPAVDITD  107 (263)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHTCTT--CCEEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCC--CCGGGCCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHhc--CCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CChhhCCH
Confidence            678999999999999888887777655  688899999999999999998  778899999999998765  77888999


Q ss_pred             HHHHHhhheeec----------------c--eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           80 EKVKRVMIMVVF----------------L--GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~--~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      ++|+..+++|+.                .  ++||++||..+..+.++...|+++|++++.|+++++.+++++||++|+|
T Consensus       108 ~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  187 (263)
T 3ak4_A          108 EEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCV  187 (263)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCCCCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEE
Confidence            999999999987                2  7999999999998889999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcC-------CC-hHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMG-------ID-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++......       .. ++..+.+....  |++|+++|+|
T Consensus       188 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~d  233 (263)
T 3ak4_A          188 CPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLT--PLGRIEEPED  233 (263)
T ss_dssp             EECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTC--TTCSCBCHHH
T ss_pred             ecccccChhhhhhccccccccccCcHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999998654320       01 22233333444  7899998875

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=99.97  E-value=1.9e-30  Score=193.24  Aligned_cols=174  Identities=17%  Similarity=0.176  Sum_probs=141.5

Q ss_pred             cccCCCEEEEeecchH---HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCc
Q 042200            2 FIQHRAKVIIADVQDD---LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~---~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~   74 (181)
                      |+++|++|++++|+.+   .+++..++..   .+.++.+|++|.+++++++++  .+++++|+||||||.....  ..++
T Consensus        30 l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~  106 (261)
T 2wyu_A           30 LKEAGAEVALSYQAERLRPEAEKLAEALG---GALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRY  106 (261)
T ss_dssp             HHHHTCEEEEEESCGGGHHHHHHHHHHTT---CCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCG
T ss_pred             HHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CcEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCc
Confidence            6788999999999875   3333322222   478899999999999999998  7788999999999976420  0456


Q ss_pred             ccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           75 LDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.+.++|+..+++|+.               .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|
T Consensus       107 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~  186 (261)
T 2wyu_A          107 IDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVN  186 (261)
T ss_dssp             GGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccccCCCCCchHHHHHHHHHHHHHHHHHHHHhhhCcEEE
Confidence            77899999999999998               479999999999999899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++...... .++..+.+.+..  |++|+++|+|
T Consensus       187 ~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~d  225 (261)
T 2wyu_A          187 AISAGPVRTVAARSIPG-FTKMYDRVAQTA--PLRRNITQEE  225 (261)
T ss_dssp             EEEECCCCCTGGGGCTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EEeeCCCcCchhhhccc-cHHHHHHHHhcC--CCCCCCCHHH
Confidence            99999999998654321 234444455555  8899998875

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=99.97  E-value=2.5e-30  Score=192.58  Aligned_cols=166  Identities=14%  Similarity=0.132  Sum_probs=133.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++.+...+.    .+.++.+|+++.+++++++++  .+++++|+||||||....  .. .+.+
T Consensus        46 ~l~~~G~~V~~~~r~~~~~~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~-~~~~  118 (260)
T 3gem_A           46 RLLEHGHRVIISYRTEHASVTELRQA----GAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVHNASEWLA--ET-PGEE  118 (260)
T ss_dssp             HHHHTTCCEEEEESSCCHHHHHHHHH----TCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEECCCCCCC--CC-TTCH
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHhc----CCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCC--CC-CCCC
Confidence            37889999999999987765555544    377899999999999999998  778999999999998765  33 5567


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.++++ +|+||+|
T Consensus       119 ~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~-~Irvn~v  197 (260)
T 3gem_A          119 ADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGSSKHIAYCATKAGLESLTLSFAARFAP-LVKVNGI  197 (260)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCCSSCHHHHHHHHHHHHHHHHHHHHHTT-TCEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCCCCcHhHHHHHHHHHHHHHHHHHHHCC-CCEEEEE
Confidence            7899999999998                 489999999999999999999999999999999999999998 6999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++..     .++..+......  |++|+++|+|
T Consensus       198 ~PG~v~t~~~~-----~~~~~~~~~~~~--p~~r~~~~ed  230 (260)
T 3gem_A          198 APALLMFQPKD-----DAAYRANALAKS--ALGIEPGAEV  230 (260)
T ss_dssp             EECTTCC--------------------C--CSCCCCCTHH
T ss_pred             eecccccCCCC-----CHHHHHHHHhcC--CCCCCCCHHH
Confidence            99999998643     233444555555  8899998875

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=99.97  E-value=6.2e-30  Score=192.34  Aligned_cols=175  Identities=15%  Similarity=0.183  Sum_probs=146.8

Q ss_pred             CcccCCCEEEEeecch--HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCc
Q 042200            1 VFIQHRAKVIIADVQD--DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~   74 (181)
                      +|+++|++|++++|+.  +.+++..++..   ++.++.+|+++.+++++++++  .+++++|+||||||.....  ...+
T Consensus        47 ~l~~~G~~V~~~~r~~~~~~~~~l~~~~~---~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~  123 (280)
T 3nrc_A           47 AMHREGAELAFTYVGQFKDRVEKLCAEFN---PAAVLPCDVISDQEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNF  123 (280)
T ss_dssp             HHHHTTCEEEEEECTTCHHHHHHHHGGGC---CSEEEECCTTCHHHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCH
T ss_pred             HHHHcCCEEEEeeCchHHHHHHHHHHhcC---CceEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCcc
Confidence            3688999999999987  55555544433   588999999999999999999  7789999999999986531  1344


Q ss_pred             cc-CCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           75 LD-TDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        75 ~~-~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+ .+.++|+..+++|+.                .|+||++||.++..+.++...|+++|+++++|+++++.+++++||+
T Consensus       124 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~la~e~~~~gi~  203 (280)
T 3nrc_A          124 IDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGAEKAMPSYNTMGVAKASLEATVRYTALALGEDGIK  203 (280)
T ss_dssp             HHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGGTSCCTTTHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             ccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeccccccCCCCchhhHHHHHHHHHHHHHHHHHHHHcCcE
Confidence            44 889999999999998                5799999999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       204 v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~~~~~ped  244 (280)
T 3nrc_A          204 VNAVSAGPIKTLAASGISN-FKKMLDYNAMVS--PLKKNVDIME  244 (280)
T ss_dssp             EEEEEECCCCCSGGGGCTT-HHHHHHHHHHHS--TTCSCCCHHH
T ss_pred             EEEEeeccccchhhhcCcc-hHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999999998776532 345556666666  8899998875

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=99.97  E-value=1.1e-30  Score=193.84  Aligned_cols=173  Identities=24%  Similarity=0.263  Sum_probs=146.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|++|.++++++++.  .+++++|+||||||....  .++.+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~  100 (253)
T 1hxh_A           25 LLLGEGAKVAFSDINEAAGQQLAAELGE--RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGR  100 (253)
T ss_dssp             HHHHTTCEEEEECSCHHHHHHHHHHHCT--TEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCC--BCTTTCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHcCC--ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCC
Confidence            3678999999999999888887777744  788999999999999999998  678999999999998765  7788889


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC--CeEEEE
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY--DIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~--~i~v~~  140 (181)
                      .++|+..+++|+.                +++||++||..+..+.++...|+++|+++++|+++++.+++++  ||++|+
T Consensus       101 ~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~  180 (253)
T 1hxh_A          101 LEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNS  180 (253)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             HHHHHHHHHhhcHHHHHHHHHHHHHHHHcCCEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEE
Confidence            9999999999976                4899999999999999999999999999999999999999988  999999


Q ss_pred             EecCcccCcccchhcCCChHHHHH-HHH---HhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKE-LLY---ASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++.....+  ++..+. +..   ..  |++|+++|+|
T Consensus       181 v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~--p~~~~~~~~d  221 (253)
T 1hxh_A          181 IHPDGIYTPMMQASLP--KGVSKEMVLHDPKLN--RAGRAYMPER  221 (253)
T ss_dssp             EEESEECCHHHHHHSC--TTCCHHHHBCBTTTB--TTCCEECHHH
T ss_pred             EEeCCccCchhhhccc--hhhhHHHHhhhhccC--ccCCCCCHHH
Confidence            9999999998765321  122222 222   23  6788888764

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=99.97  E-value=2.8e-30  Score=192.21  Aligned_cols=175  Identities=15%  Similarity=0.180  Sum_probs=141.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+++++..+++...   .++.++.+|++|.+++++++++  .+++ +|+||||||....  .++.+
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g-id~lv~~Ag~~~~--~~~~~  103 (260)
T 2z1n_A           27 LARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG-ADILVYSTGGPRP--GRFME  103 (260)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC-CSEEEECCCCCCC--BCGGG
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC-CCEEEECCCCCCC--CCccc
Confidence            6789999999999988887776665321   2688999999999999999998  6677 9999999998765  77888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|
T Consensus       104 ~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  183 (260)
T 2z1n_A          104 LGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPWQDLALSNIMRLPVIGVVRTLALELAPHGVTVN  183 (260)
T ss_dssp             CCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCCCCCchhHHHHHHHHHHHHHHHHHHhhhCeEEE
Confidence            999999999999988                 489999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcC-------CChHH-HHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMG-------IDKKT-FKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~-------~~~~~-~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++......       ..++. .+.+....  |++|+++|+|
T Consensus       184 ~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~~~d  231 (260)
T 2z1n_A          184 AVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRI--PMGRVGKPEE  231 (260)
T ss_dssp             EEEECHHHHCCCC-----------------------CC--TTSSCCCHHH
T ss_pred             EEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcC--CCCCccCHHH
Confidence            99999999998652110       01111 23333334  7899988875

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=99.97  E-value=1.1e-29  Score=190.96  Aligned_cols=173  Identities=20%  Similarity=0.226  Sum_probs=148.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCc-----
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTT-----   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~-----   74 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|+++.++++++++. .+++++|++|||++..... ..+     
T Consensus        49 ~l~~~G~~Vi~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv~~aag~~~~-~~~~~~~~  125 (281)
T 3ppi_A           49 RLHADGLGVVIADLAAEKGKALADELGN--RAEFVSTNVTSEDSVLAAIEAANQLGRLRYAVVAHGGFGVA-QRIVQRDG  125 (281)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHHHTTSSEEEEEEECCCCCCCC-CCSBCTTS
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEEEccCccccc-cccccccc
Confidence            3788999999999999999998888865  799999999999999999998 7788999999994443321 333     


Q ss_pred             ccCCHHHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      .+.+.++|+..+++|+.                       .|+||++||..+..+.++...|++||+++++|+++|+.++
T Consensus       126 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~  205 (281)
T 3ppi_A          126 SPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAGYEGQIGQTAYAAAKAGVIGLTIAAARDL  205 (281)
T ss_dssp             CBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccccCCCCCCcccHHHHHHHHHHHHHHHHHH
Confidence            36788999999999987                       3689999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccc-ccccccCC
Q 042200          132 GQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      +++||+||+|+||++.|++....   .++..+.+....  |+ +|+.+|+|
T Consensus       206 ~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~--~~~~~~~~ped  251 (281)
T 3ppi_A          206 SSAGIRVNTIAPGTMKTPIMESV---GEEALAKFAANI--PFPKRLGTPDE  251 (281)
T ss_dssp             GGGTEEEEEEEECSBCCHHHHTT---CHHHHHHHHHTC--CSSSSCBCHHH
T ss_pred             hhcCeEEEEEecCcCCchhhhcc---cHHHHHHHHhcC--CCCCCCCCHHH
Confidence            99999999999999999987665   446666666665  66 88888875

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=99.97  E-value=3.5e-30  Score=190.96  Aligned_cols=176  Identities=19%  Similarity=0.149  Sum_probs=147.4

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc------CCccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF------GKLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~------~~id~vi~~ag~~~~~   70 (181)
                      +|+++|++|+++ .|+.+.+++...++... .++.++.+|+++.++++++++.  ..+      +++|+||||||.... 
T Consensus        26 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~-  104 (255)
T 3icc_A           26 RLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNRTGSTKFDILINNAGIGPG-  104 (255)
T ss_dssp             HHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCC-
T ss_pred             HHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcccccCCcccEEEECCCCCCC-
Confidence            378899998885 66777777776666443 5789999999999999999887  333      359999999998766 


Q ss_pred             CCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                       ..+.+.+.++|+..+++|+.               .++||++||.++..+.+....|+++|+++++|+++++.+++++|
T Consensus       105 -~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g  183 (255)
T 3icc_A          105 -AFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAATRISLPDFIAYSMTKGAINTMTFTLAKQLGARG  183 (255)
T ss_dssp             -BCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             -CChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhhccCCCCcchhHHhHHHHHHHHHHHHHHHHhcC
Confidence             77888999999999999998               57999999999999999999999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+|+||++.|++...... ++...+......  |++|+++|+|
T Consensus       184 i~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  226 (255)
T 3icc_A          184 ITVNAILPGFVKTDMNAELLS-DPMMKQYATTIS--AFNRLGEVED  226 (255)
T ss_dssp             CEEEEEEECCBCCSSSTTTTT-SHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             eEEEEEEEeeecccchhhhcc-cHHHHHhhhccC--CcCCCCCHHH
Confidence            999999999999999877654 333344444444  7899998875

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=99.97  E-value=1.8e-30  Score=192.71  Aligned_cols=175  Identities=17%  Similarity=0.198  Sum_probs=141.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+  +...+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        23 ~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~   98 (255)
T 2q2v_A           23 VLARAGANIVLNGFGDP--APALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDILVNNAGIQHV--APVEQF   98 (255)
T ss_dssp             HHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCC--BCGGGC
T ss_pred             HHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhC
Confidence            36789999999999865  3333343222 3688999999999999999998  778899999999998765  778888


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+
T Consensus        99 ~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  178 (255)
T 2q2v_A           99 PLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGSTGKAAYVAAKHGVVGLTKVVGLETATSNVTCNA  178 (255)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            99999999999997                 4899999999999998999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHH---H----HHH-HHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKT---F----KEL-LYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~---~----~~~-~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++........++.   .    +.+ ....  |++|+++|+|
T Consensus       179 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~d  225 (255)
T 2q2v_A          179 ICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQ--PSLAFVTPEH  225 (255)
T ss_dssp             EEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTC--TTCCCBCHHH
T ss_pred             EeeCCCcCcchhhhcccccccccchHHHHHHHHhccC--CCCCCcCHHH
Confidence            999999999865432100111   1    222 2223  7788888875

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=99.97  E-value=6.3e-30  Score=195.47  Aligned_cols=150  Identities=21%  Similarity=0.281  Sum_probs=134.3

Q ss_pred             CcccCCCEEEEeecc------------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccc
Q 042200            1 VFIQHRAKVIIADVQ------------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAG   65 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag   65 (181)
                      +|+++|++|++++|+            .+.+++..+.+... .++.++.+|++|.+++++++++  .+++++|+||||||
T Consensus        65 ~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg  144 (317)
T 3oec_A           65 RLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVVDEALAEFGHIDILVSNVG  144 (317)
T ss_dssp             HHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            378899999999886            66666666555332 5799999999999999999998  77899999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHH
Q 042200           66 IISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~l  127 (181)
                      ....  ..+.+.+.++|+..+++|+.                  .|+||++||..+..+.++...|++||+++++|+++|
T Consensus       145 ~~~~--~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~l  222 (317)
T 3oec_A          145 ISNQ--GEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVGLRGAPGQSHYAASKHGVQGLMLSL  222 (317)
T ss_dssp             CCCC--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGGSSCCTTBHHHHHHHHHHHHHHHHH
T ss_pred             CCCC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHhcCCCCCCcchHHHHHHHHHHHHHH
Confidence            9877  78888999999999999998                  378999999999999999999999999999999999


Q ss_pred             HHHhcCCCeEEEEEecCcccCcccc
Q 042200          128 CVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      +.+++++||+||+|+||++.|++..
T Consensus       223 a~e~~~~gI~vn~v~PG~v~T~~~~  247 (317)
T 3oec_A          223 ANEVGRHNIRVNSVNPGAVNTEMAL  247 (317)
T ss_dssp             HHHHGGGTEEEEEEEECSBSSHHHH
T ss_pred             HHHHhhcCeEEEEEecCcccCcccc
Confidence            9999999999999999999999764

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.97  E-value=4.1e-30  Score=191.00  Aligned_cols=172  Identities=18%  Similarity=0.225  Sum_probs=142.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+. ++..+++.   . .++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~-~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~~~   97 (256)
T 2d1y_A           25 AFAREGALVALCDLRPEG-KEVAEAIG---G-AFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP--GSALTVR   97 (256)
T ss_dssp             HHHHTTCEEEEEESSTTH-HHHHHHHT---C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCC
T ss_pred             HHHHCCCEEEEEeCChhH-HHHHHHhh---C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCC
Confidence            378899999999999877 66666553   4 7889999999999999998  678899999999998766  7788889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+|
T Consensus        98 ~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  177 (256)
T 2d1y_A           98 LPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAV  177 (256)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCCCCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEE
Confidence            9999999999998                 48999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcC---CChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMG---IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++......   ..++..+.+....  |++|+++|+|
T Consensus       178 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  218 (256)
T 2d1y_A          178 APGAIATEAVLEAIALSPDPERTRRDWEDLH--ALRRLGKPEE  218 (256)
T ss_dssp             EECSBCCHHHHHHHC--------CHHHHTTS--TTSSCBCHHH
T ss_pred             eeCCccCchhhhccccccCCHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999998655311   0112222333333  7788888864

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=99.97  E-value=3.7e-30  Score=191.81  Aligned_cols=153  Identities=19%  Similarity=0.181  Sum_probs=131.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++.++++.  .+++++|+||||||..... .++.+.
T Consensus        48 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~-~~~~~~  126 (262)
T 3rkr_A           48 KLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCDVLVNNAGVGWFG-GPLHTM  126 (262)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCS-SCGGGS
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCCEEEECCCccCCC-CCcccC
Confidence            36789999999999999888877776433 5789999999999999999998  7788999999999984321 678889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++++
T Consensus       127 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~  206 (262)
T 3rkr_A          127 KPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNPVADGAAYTASKWGLNGLMTSAAEELRQHQVRVSL  206 (262)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            99999999999998                 5899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchh
Q 042200          141 IAHIVSATPFFCNA  154 (181)
Q Consensus       141 i~Pg~v~t~~~~~~  154 (181)
                      |+||+++|++....
T Consensus       207 v~PG~v~t~~~~~~  220 (262)
T 3rkr_A          207 VAPGSVRTEFGVGL  220 (262)
T ss_dssp             EEECCC--------
T ss_pred             EecCCCcCCccccc
Confidence            99999999987554

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=99.97  E-value=4.4e-30  Score=193.58  Aligned_cols=176  Identities=19%  Similarity=0.229  Sum_probs=140.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~~   76 (181)
                      |+++|++|++++|+.+ .++..+++... +.+.++.+|++|.+++++++++  .+++++|+||||||.....  ..++.+
T Consensus        43 l~~~G~~V~~~~r~~~-~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~  121 (285)
T 2p91_A           43 FHREGAQLAFTYATPK-LEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVID  121 (285)
T ss_dssp             HHHTTCEEEEEESSGG-GHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGG
T ss_pred             HHHcCCEEEEEeCCHH-HHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCccc
Confidence            6789999999999874 22222322111 2467899999999999999998  7789999999999986420  045667


Q ss_pred             CCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|+..+++|+.                .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+||+
T Consensus       122 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  201 (285)
T 2p91_A          122 TSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGAEKVVPHYNVMGIAKAALESTVRYLAYDIAKHGHRINA  201 (285)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             CCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchhccCCCCccHHHHHHHHHHHHHHHHHHHhcccCcEEEE
Confidence            899999999999998                3899999999999998999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       202 v~PG~v~t~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~d  239 (285)
T 2p91_A          202 ISAGPVKTLAAYSITG-FHLLMEHTTKVN--PFGKPITIED  239 (285)
T ss_dssp             EEECCCCCSCC--CTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             EEeCcccCchhhcccc-hHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998654321 233444444455  7899988875

>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A

Probab=99.97  E-value=1e-29  Score=189.74  Aligned_cols=173  Identities=20%  Similarity=0.178  Sum_probs=144.3

Q ss_pred             CcccCCCEEEEeecchHHH-HHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLC-RALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+.. ++..+++..  ..++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.
T Consensus        41 ~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~--~~~~  118 (267)
T 3gdg_A           41 GCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFGQIDAFIANAGATAD--SGIL  118 (267)
T ss_dssp             HHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTSCCSEEEECCCCCCC--SCTT
T ss_pred             HHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcc
Confidence            3688999999999875333 344443321  14799999999999999999998  778999999999999876  7788


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccC--ccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIG--EALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~--~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.  ++...|+++|+++++|+++++.+++++ |
T Consensus       119 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i  197 (267)
T 3gdg_A          119 DGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGHIANFPQEQTSYNVAKAGCIHMARSLANEWRDF-A  197 (267)
T ss_dssp             TSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHTTTT-C
T ss_pred             cCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEccccccccCCCCCCCcchHHHHHHHHHHHHHHHHhccC-c
Confidence            8999999999999998                 5799999999888765  578899999999999999999999987 9


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+|+||++.|++.+..   .++..+.+....  |++|+++|+|
T Consensus       198 ~v~~v~PG~v~t~~~~~~---~~~~~~~~~~~~--~~~r~~~~~d  237 (267)
T 3gdg_A          198 RVNSISPGYIDTGLSDFV---PKETQQLWHSMI--PMGRDGLAKE  237 (267)
T ss_dssp             EEEEEEECCEECSCGGGS---CHHHHHHHHTTS--TTSSCEETHH
T ss_pred             EEEEEECCccccchhhhC---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999999987654   445555555555  8899999875

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=99.97  E-value=1.5e-29  Score=189.79  Aligned_cols=172  Identities=20%  Similarity=0.220  Sum_probs=142.1

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCC--CCceEEEeeecCCh----hHHHHHHHh--cccCCccEEEEcccccCCCC
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDS--DELISYVCCNVTID----SDVKNVFDF--TKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~--~~~~~~~~~D~~~~----~~i~~~~~~--~~~~~id~vi~~ag~~~~~~   71 (181)
                      +|+++|++|++++| +.+.+++..+++..  ..++.++.+|+++.    +++++++++  .+++++|+||||||....  
T Consensus        30 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~--  107 (276)
T 1mxh_A           30 RLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP--  107 (276)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--
T ss_pred             HHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--
Confidence            36789999999999 88888777666632  13688999999999    999999988  678899999999998765  


Q ss_pred             CCcccCCH-----------HHHHHhhheeec----------------c------eeEEEeccccccccCccchhhHhhHH
Q 042200           72 RTTLDTDN-----------EKVKRVMIMVVF----------------L------GVLLFTANLATETIGEALYDYLMSKY  118 (181)
Q Consensus        72 ~~~~~~~~-----------~~~~~~~~~n~~----------------~------~~iv~iss~~~~~~~~~~~~y~~sK~  118 (181)
                      .++.+.+.           ++|+..+++|+.                .      ++||++||..+..+.+++..|+++|+
T Consensus       108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~  187 (276)
T 1mxh_A          108 TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKH  187 (276)
T ss_dssp             CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCCCCCeehHHHHH
Confidence            66777777           999999999998                1      89999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccccc-ccccCC
Q 042200          119 AVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGV-VLKAAD  181 (181)
Q Consensus       119 a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~e  181 (181)
                      ++++|+++++.+++++||+||+|+||++.|+  ...   .++..+.+....  |++| +++|+|
T Consensus       188 a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~--~~~---~~~~~~~~~~~~--p~~r~~~~~~d  244 (276)
T 1mxh_A          188 ALGGLTRAAALELAPRHIRVNAVAPGLSLLP--PAM---PQETQEEYRRKV--PLGQSEASAAQ  244 (276)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBSCC--SSS---CHHHHHHHHTTC--TTTSCCBCHHH
T ss_pred             HHHHHHHHHHHHHhhcCeEEEEEecCcccCC--ccC---CHHHHHHHHhcC--CCCCCCCCHHH
Confidence            9999999999999999999999999999999  221   334444444444  7788 888864

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=99.97  E-value=9.1e-31  Score=194.58  Aligned_cols=169  Identities=19%  Similarity=0.226  Sum_probs=137.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCc----c
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTT----L   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~----~   75 (181)
                      +|+++|++|++++|+.+...   +++..  ++.++.+|++|.++++++++. .+++++|+||||||....  ..+    .
T Consensus        28 ~l~~~G~~V~~~~r~~~~~~---~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv~nAg~~~~--~~~~~~~~  100 (257)
T 3tl3_A           28 RLLDAGAQVVVLDIRGEDVV---ADLGD--RARFAAADVTDEAAVASALDLAETMGTLRIVVNCAGTGNA--IRVLSRDG  100 (257)
T ss_dssp             HHHHHTCEEEEEESSCHHHH---HHTCT--TEEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECGGGSHH--HHHHHHTC
T ss_pred             HHHHCCCEEEEEeCchHHHH---HhcCC--ceEEEECCCCCHHHHHHHHHHHHHhCCCCEEEECCCCCCC--cccccccc
Confidence            37889999999999765443   33443  789999999999999999998 558999999999998643  222    2


Q ss_pred             cCCHHHHHHhhheeec-------------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF-------------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      +.+.++|+..+++|+.                         .|+||++||..+..+.+++..|++||+++++|+++|+.|
T Consensus       101 ~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e  180 (257)
T 3tl3_A          101 VFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAAFDGQIGQAAYSASKGGVVGMTLPIARD  180 (257)
T ss_dssp             CCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC--CCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhhcCCCCCCccHHHHHHHHHHHHHHHHHH
Confidence            4788999999999997                         258999999999999899999999999999999999999


Q ss_pred             hcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccc-ccccccCC
Q 042200          131 LGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      ++++||+||+|+||+++|++....   .++..+.+....  |+ +|+++|+|
T Consensus       181 ~~~~gI~vn~v~PG~v~T~~~~~~---~~~~~~~~~~~~--~~~~r~~~p~d  227 (257)
T 3tl3_A          181 LASHRIRVMTIAPGLFDTPLLASL---PEEARASLGKQV--PHPSRLGNPDE  227 (257)
T ss_dssp             HGGGTEEEEEEEECSBCCTTC------CHHHHHHHHHTS--SSSCSCBCHHH
T ss_pred             hcccCcEEEEEEecCccChhhhhc---cHHHHHHHHhcC--CCCCCccCHHH
Confidence            999999999999999999987665   345555555555  76 99999875

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=99.97  E-value=6.3e-30  Score=190.57  Aligned_cols=176  Identities=15%  Similarity=0.175  Sum_probs=135.5

Q ss_pred             CcccCCCEEEEeecchHHH-HHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLC-RALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+.. +...+.+... .++.++.+|++|.+++.+++++  .+++++|+||||||........+.+
T Consensus        26 ~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~  105 (264)
T 3i4f_A           26 KLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVD  105 (264)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGG
T ss_pred             HHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccCCCcccc
Confidence            3788999999998875443 3333333222 4799999999999999999998  7778999999999943222267888


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccc-cc-cccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANL-AT-ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~-~~-~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.++|+..+++|+.                 .++||++||. .. ..+.++...|+++|+++++|+++|+.+++++||+
T Consensus       106 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~  185 (264)
T 3i4f_A          106 YEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSAPGWIYRSAFAAAKVGLVSLTKTVAYEEAEYGIT  185 (264)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhcccCCCCCCchhHHHHHHHHHHHHHHHHHhhhcCcE
Confidence            999999999999998                 4899999987 43 5566778899999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+||.+.|++.....   ++..+......  |++|+++|+|
T Consensus       186 v~~v~PG~v~t~~~~~~~---~~~~~~~~~~~--p~~r~~~~~d  224 (264)
T 3i4f_A          186 ANMVCPGDIIGEMKEATI---QEARQLKEHNT--PIGRSGTGED  224 (264)
T ss_dssp             EEEEEECCCCGGGGSCCH---HHHHHC----------CCCCHHH
T ss_pred             EEEEccCCccCccchhcc---HHHHHHHhhcC--CCCCCcCHHH
Confidence            999999999999876543   23333333444  7888888865

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=99.96  E-value=3.6e-29  Score=185.14  Aligned_cols=148  Identities=20%  Similarity=0.184  Sum_probs=130.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||..... .++.+.+.
T Consensus        20 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~-~~~~~~~~   96 (248)
T 3asu_A           20 FIQQGHKVIATGRRQERLQELKDELGD--NLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNNAGLALGM-EPAHKASV   96 (248)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEECCCCCCCC-SCGGGSCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhcC--ceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCC-CchhhCCH
Confidence            678999999999999988888777764  789999999999999999998  6788999999999986321 67778899


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||.++..+.++...|++||+++++|+++++.+++++||+||+|+
T Consensus        97 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~  176 (248)
T 3asu_A           97 EDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWPYAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIE  176 (248)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEe
Confidence            999999999987                 489999999999999999999999999999999999999999999999999


Q ss_pred             cCccc-Ccccc
Q 042200          143 HIVSA-TPFFC  152 (181)
Q Consensus       143 Pg~v~-t~~~~  152 (181)
                      ||++. |++..
T Consensus       177 PG~v~gT~~~~  187 (248)
T 3asu_A          177 PGLVGGTEFSN  187 (248)
T ss_dssp             ECSBCC-----
T ss_pred             ccccccCcchh
Confidence            99999 99864

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=99.96  E-value=1.4e-29  Score=188.50  Aligned_cols=147  Identities=31%  Similarity=0.395  Sum_probs=134.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~~~~  102 (260)
T 1nff_A           27 MVAEGAKVVFGDILDEEGKAMAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI--GTIEDYAL  102 (260)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHTGG--GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTSCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhhc--CceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            678999999999999888887777654  588999999999999999998  778899999999998766  77888999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|+|+
T Consensus       103 ~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  182 (260)
T 1nff_A          103 TEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIH  182 (260)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCCCCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEE
Confidence            999999999988                 489999999999999899999999999999999999999999999999999


Q ss_pred             cCcccCcccc
Q 042200          143 HIVSATPFFC  152 (181)
Q Consensus       143 Pg~v~t~~~~  152 (181)
                      ||++.|++..
T Consensus       183 Pg~v~t~~~~  192 (260)
T 1nff_A          183 PGLVKTPMTD  192 (260)
T ss_dssp             ECCBCSGGGT
T ss_pred             eCCCCCCccc
Confidence            9999999864

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=99.96  E-value=5.2e-29  Score=185.25  Aligned_cols=176  Identities=15%  Similarity=0.148  Sum_probs=144.1

Q ss_pred             ccc---CCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--c--ccCCcc--EEEEcccccCC
Q 042200            2 FIQ---HRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--T--KFGKLD--IMFNNAGIISN   69 (181)
Q Consensus         2 l~~---~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~--~~~~id--~vi~~ag~~~~   69 (181)
                      |++   +|++|++++|+.+.+++..+++..   ..++.++.+|+++.++++++++.  .  .++++|  +||||||....
T Consensus        26 l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~  105 (259)
T 1oaa_A           26 LARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGD  105 (259)
T ss_dssp             HHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCC
T ss_pred             HHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhccccccCCccEEEECCcccCC
Confidence            455   899999999999888877766632   13689999999999999999998  4  567888  99999998643


Q ss_pred             CCCCccc-CCHHHHHHhhheeec---------------c----eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHH
Q 042200           70 MDRTTLD-TDNEKVKRVMIMVVF---------------L----GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        70 ~~~~~~~-~~~~~~~~~~~~n~~---------------~----~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      ...++.+ .+.++|+..+++|+.               .    |+||++||..+..+.++...|++||+++++|+++++.
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~  185 (259)
T 1oaa_A          106 VSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAA  185 (259)
T ss_dssp             CSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchhcCCCCCccHHHHHHHHHHHHHHHHHh
Confidence            1135666 688999999999998               2    6799999999999999999999999999999999999


Q ss_pred             HhcCCCeEEEEEecCcccCcccchhcC--CChHHHHHHHHHhhcccccccccCC
Q 042200          130 ELGQYDIRVNSIAHIVSATPFFCNAMG--IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++++  |+||+|+||+++|++......  ..++..+.+....  |++|+++|+|
T Consensus       186 e~~~--i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~d  235 (259)
T 1oaa_A          186 EEPS--VRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK--SDGALVDCGT  235 (259)
T ss_dssp             HCTT--EEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH--HTTCSBCHHH
T ss_pred             hCCC--ceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhh--hcCCcCCHHH
Confidence            9974  999999999999998765431  1344444455555  7899999875

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=99.96  E-value=2.4e-29  Score=188.42  Aligned_cols=152  Identities=16%  Similarity=0.144  Sum_probs=131.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++....++.++.+|++|.++++++++.  .+++++|+||||||..... .++.+.+
T Consensus        40 ~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~-~~~~~~~  118 (272)
T 2nwq_A           40 RFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGLINNAGLALGT-DPAQSCD  118 (272)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEEEECCCCCCCC-CCGGGCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCC-CCcccCC
Confidence            378899999999999988888877765434688999999999999999998  7789999999999986421 5677889


Q ss_pred             HHHHHHhhheeec-----------------ce-eEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LG-VLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~-~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                 .| +||++||..+..+.++...|+++|+++++|+++++.+++++||++|+
T Consensus       119 ~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~  198 (272)
T 2nwq_A          119 LDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWPYPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTN  198 (272)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccCCCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            9999999999998                 36 99999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccch
Q 042200          141 IAHIVSATPFFCN  153 (181)
Q Consensus       141 i~Pg~v~t~~~~~  153 (181)
                      |+||++.|++...
T Consensus       199 v~PG~v~T~~~~~  211 (272)
T 2nwq_A          199 LEPGLCESEFSLV  211 (272)
T ss_dssp             EEECSBC------
T ss_pred             EEcCCCcCcchhc
Confidence            9999999998653

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=99.96  E-value=3.1e-29  Score=185.24  Aligned_cols=176  Identities=24%  Similarity=0.282  Sum_probs=147.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHc-CCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCC---
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEF-DSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRT---   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~-~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~---   73 (181)
                      +|+++|++|++++|+.+.+++..+++ ... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..   
T Consensus        21 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~   98 (250)
T 2cfc_A           21 RFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDVLVNNAGITGN--SEAGV   98 (250)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--TTCCS
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CCcch
Confidence            36789999999999998888777766 322 4789999999999999999998  677899999999998755  44   


Q ss_pred             cccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           74 TLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.+.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.++.++||
T Consensus        99 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi  178 (250)
T 2cfc_A           99 LHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAFPGRSAYTTSKGAVLQLTKSVAVDYAGSGI  178 (250)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             hhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCchhHHHHHHHHHHHHHHHHHHhcccCe
Confidence            778899999999999986                 489999999999988899999999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++++|+||++.|++...... .+...+.+....  |++|+++|+|
T Consensus       179 ~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  220 (250)
T 2cfc_A          179 RCNAVCPGMIETPMTQWRLD-QPELRDQVLARI--PQKEIGTAAQ  220 (250)
T ss_dssp             EEEEEEECSBCSTTTHHHHT-SHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEEEEEeCcCccCccccccC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999998765222 333444444444  7788888864

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=99.96  E-value=9.3e-30  Score=195.34  Aligned_cols=171  Identities=16%  Similarity=0.095  Sum_probs=144.2

Q ss_pred             cccCCCEEEEee-cchHHHHHHHhHcC-C-CCceEEEeeecCChh-----------------HHHHHHHh--cccCCccE
Q 042200            2 FIQHRAKVIIAD-VQDDLCRALCKEFD-S-DELISYVCCNVTIDS-----------------DVKNVFDF--TKFGKLDI   59 (181)
Q Consensus         2 l~~~G~~Vv~~~-r~~~~~~~~~~~~~-~-~~~~~~~~~D~~~~~-----------------~i~~~~~~--~~~~~id~   59 (181)
                      |+++|++|++++ |+.+.+++..+++. . ..++.++.+|+++.+                 ++++++++  .+++++|+
T Consensus        66 La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~  145 (328)
T 2qhx_A           66 LHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDV  145 (328)
T ss_dssp             HHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCE
T ss_pred             HHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCE
Confidence            678999999999 99888887777663 1 147899999999999                 99999998  77889999


Q ss_pred             EEEcccccCCCCCCcccCC--------------HHHHHHhhheeec----------------c-------eeEEEecccc
Q 042200           60 MFNNAGIISNMDRTTLDTD--------------NEKVKRVMIMVVF----------------L-------GVLLFTANLA  102 (181)
Q Consensus        60 vi~~ag~~~~~~~~~~~~~--------------~~~~~~~~~~n~~----------------~-------~~iv~iss~~  102 (181)
                      ||||||....  .++.+.+              .++|+..+++|+.                .       ++||++||..
T Consensus       146 lVnnAG~~~~--~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~  223 (328)
T 2qhx_A          146 LVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAM  223 (328)
T ss_dssp             EEECCCCCCC--CCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTT
T ss_pred             EEECCCCCCC--CChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchh
Confidence            9999998765  6677777              8999999999988                2       6899999999


Q ss_pred             ccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccc-cccccCC
Q 042200          103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKG-VVLKAAD  181 (181)
Q Consensus       103 ~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e  181 (181)
                      +..+.+++..|+++|+++++|+++|+.+++++||+||+|+||++.|++ ...    ++..+.+....  |++ |+++|+|
T Consensus       224 ~~~~~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~~----~~~~~~~~~~~--p~~~r~~~ped  296 (328)
T 2qhx_A          224 TNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DMP----PAVWEGHRSKV--PLYQRDSSAAE  296 (328)
T ss_dssp             TTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CSC----HHHHHHHHTTC--TTTTSCBCHHH
T ss_pred             hccCCCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-ccc----HHHHHHHHhhC--CCCCCCCCHHH
Confidence            999999999999999999999999999999999999999999999998 332    34444444444  778 8888875

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=99.96  E-value=2.7e-30  Score=193.74  Aligned_cols=152  Identities=20%  Similarity=0.167  Sum_probs=127.4

Q ss_pred             CcccCCCEEEEeecchHH-------HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIADVQDDL-------CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~   70 (181)
                      +|+++|++|++++|+.++       +++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||.... 
T Consensus        25 ~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~-  103 (274)
T 3e03_A           25 RAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAATVDTFGGIDILVNNASAIWL-  103 (274)
T ss_dssp             HHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-
T ss_pred             HHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccC-
Confidence            378899999999998643       33333333221 4789999999999999999998  778999999999999876 


Q ss_pred             CCCcccCCHHHHHHhhheeec-----------------ceeEEEecccccccc--CccchhhHhhHHHHHHHHHHHHHHh
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETI--GEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~--~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                       ..+.+.+.++|+..+++|+.                 .|+||++||..+..+  .++...|++||+++++|+++++.++
T Consensus       104 -~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~asKaal~~l~~~la~e~  182 (274)
T 3e03_A          104 -RGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPSLNPAWWGAHTGYTLAKMGMSLVTLGLAAEF  182 (274)
T ss_dssp             -CCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             -CCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHhcCCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence             78888999999999999998                 589999999998887  6788899999999999999999999


Q ss_pred             cCCCeEEEEEecC-cccCcccchh
Q 042200          132 GQYDIRVNSIAHI-VSATPFFCNA  154 (181)
Q Consensus       132 ~~~~i~v~~i~Pg-~v~t~~~~~~  154 (181)
                      +++||+||+|+|| ++.|++....
T Consensus       183 ~~~gI~vn~v~PG~~v~T~~~~~~  206 (274)
T 3e03_A          183 GPQGVAINALWPRTVIATDAINML  206 (274)
T ss_dssp             GGGTCEEEEEECSBCBCC------
T ss_pred             hhcCEEEEEEECCcccccchhhhc
Confidence            9999999999999 6999987433

>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*

Probab=99.96  E-value=2.4e-29  Score=194.79  Aligned_cols=173  Identities=5%  Similarity=-0.139  Sum_probs=137.6

Q ss_pred             ccc-CCCEEEEeecchHHH---------------HHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEc
Q 042200            2 FIQ-HRAKVIIADVQDDLC---------------RALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNN   63 (181)
Q Consensus         2 l~~-~G~~Vv~~~r~~~~~---------------~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~   63 (181)
                      |++ +|++|++++|+.+..               .+..+...  .++..+.+|+++.+++++++++  .++|++|+||||
T Consensus        67 LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G--~~a~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNN  144 (405)
T 3zu3_A           67 AAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKG--LYAKSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYS  144 (405)
T ss_dssp             HHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTSHHHHHHHHHHHHHHTSCEEEEEEC
T ss_pred             HHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEc
Confidence            677 899999999864321               22222222  3788999999999999999999  788999999999


Q ss_pred             ccccCC-----------CCCCc---------------------ccCCHHHHHHhhheeec------------------ce
Q 042200           64 AGIISN-----------MDRTT---------------------LDTDNEKVKRVMIMVVF------------------LG   93 (181)
Q Consensus        64 ag~~~~-----------~~~~~---------------------~~~~~~~~~~~~~~n~~------------------~~   93 (181)
                      ||....           ...++                     .+.+.++|+.++++|..                  +|
T Consensus       145 AG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG  224 (405)
T 3zu3_A          145 LASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGA  224 (405)
T ss_dssp             CCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEE
T ss_pred             CccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCc
Confidence            997410           00333                     66899999999988764                  57


Q ss_pred             eEEEeccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcCC-CeEEEEEecCcccCcccchhcCCChHHHHHHHHHhh
Q 042200           94 VLLFTANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQY-DIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASA  170 (181)
Q Consensus        94 ~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~~-~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~  170 (181)
                      +||++||.++..+.+.+  ..|++||+++.+|+|+|+.|++++ |||||+|+||.+.|++....+. .+.....+  .. 
T Consensus       225 ~IVniSSi~~~~~~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~~s~~ip~-~p~y~~~l--~~-  300 (405)
T 3zu3_A          225 QTTAFTYLGEKITHDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQASSAIPM-MPLYLSLL--FK-  300 (405)
T ss_dssp             EEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCHHHHTSTT-HHHHHHHH--HH-
T ss_pred             EEEEEeCchhhCcCCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCchhhcCCC-CcHHHHHH--HH-
Confidence            99999999999998887  999999999999999999999999 9999999999999998776643 22222211  22 


Q ss_pred             cccccccccCC
Q 042200          171 NLKGVVLKAAD  181 (181)
Q Consensus       171 ~~~~~~~~~~e  181 (181)
                       ||||.++|||
T Consensus       301 -~mkr~G~~Ed  310 (405)
T 3zu3_A          301 -VMKEKGTHEG  310 (405)
T ss_dssp             -HHHHHTCCCC
T ss_pred             -HHhcCCCcHH
Confidence             7899999986

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=99.96  E-value=1.4e-29  Score=197.69  Aligned_cols=171  Identities=8%  Similarity=-0.072  Sum_probs=136.1

Q ss_pred             ccc-CCCEEEEeecchHHHH---------------HHHhHcCCCCceEEEeeecCChhHHHHHHHh--ccc-CCccEEEE
Q 042200            2 FIQ-HRAKVIIADVQDDLCR---------------ALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFN   62 (181)
Q Consensus         2 l~~-~G~~Vv~~~r~~~~~~---------------~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~   62 (181)
                      |++ +|++|++++|+.+.++               +.++...  .++..+.+|+++.++++++++.  .++ |+||+|||
T Consensus        81 LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G--~~a~~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVN  158 (422)
T 3s8m_A           81 AAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAG--LYSKSINGDAFSDAARAQVIELIKTEMGGQVDLVVY  158 (422)
T ss_dssp             HHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTSHHHHHHHHHHHHHHSCSCEEEEEE
T ss_pred             HHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHHcCCCCCEEEE
Confidence            677 8999999999754321               2222222  3788999999999999999999  788 99999999


Q ss_pred             ccccc-------------CCCCCCc---------------------ccCCHHHHHHhhheeec-----------------
Q 042200           63 NAGII-------------SNMDRTT---------------------LDTDNEKVKRVMIMVVF-----------------   91 (181)
Q Consensus        63 ~ag~~-------------~~~~~~~---------------------~~~~~~~~~~~~~~n~~-----------------   91 (181)
                      |||..             ..  .++                     .+.+.++|+.++++|..                 
T Consensus       159 NAG~~~r~~p~~G~~~~~~~--~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~  236 (422)
T 3s8m_A          159 SLASPVRKLPGSGEVKRSAL--KPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLA  236 (422)
T ss_dssp             CCCCSEEECTTTCCEEECCC--CCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEE
T ss_pred             cCcccccccccccccccccc--ccccccccccccccccccccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhh
Confidence            99972             11  233                     35788999999887743                 


Q ss_pred             -ceeEEEeccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHH
Q 042200           92 -LGVLLFTANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYA  168 (181)
Q Consensus        92 -~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~  168 (181)
                       +|+||++||.++..+.|.+  ..|++||+++.+|+++|+.|++++|||||+|+||+|.|++....+. .+....  ...
T Consensus       237 ~gG~IVniSSi~g~~~~p~~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~~~~~ip~-~~~~~~--~~~  313 (422)
T 3s8m_A          237 DGARSVAFSYIGTEITWPIYWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQASAAIPV-MPLYIS--MVY  313 (422)
T ss_dssp             EEEEEEEEEECCCGGGHHHHTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTH-HHHHHH--HHH
T ss_pred             CCCEEEEEeCchhhccCCCccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcChhhhcCCC-ChHHHH--HHH
Confidence             5799999999999888876  8999999999999999999999999999999999999999876532 222221  122


Q ss_pred             hhcccccccccCC
Q 042200          169 SANLKGVVLKAAD  181 (181)
Q Consensus       169 ~~~~~~~~~~~~e  181 (181)
                      .  ||+|.++|||
T Consensus       314 ~--~m~r~G~pEd  324 (422)
T 3s8m_A          314 K--IMKEKGLHEG  324 (422)
T ss_dssp             H--HHHHTTCCCC
T ss_pred             h--hhcCCcChHH
Confidence            2  7899999986

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=99.96  E-value=8.7e-30  Score=190.73  Aligned_cols=176  Identities=18%  Similarity=0.199  Sum_probs=135.6

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++ .|+.+.++...+++... .++.++.+|++|.+++++++++  .+++++|+||||||..... ..+.+
T Consensus        45 ~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg~~~~~-~~~~~  123 (272)
T 4e3z_A           45 LAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAGIVDYP-QRVDE  123 (272)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCGGG
T ss_pred             HHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCCC-CChhh
Confidence            378899999777 77777777766665433 5799999999999999999998  7788999999999987542 56778


Q ss_pred             CCHHHHHHhhheeec--------------------ceeEEEeccccccccCc-cchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           77 TDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGE-ALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~-~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .+.++|+..+++|+.                    .|+||++||.++..+.+ .+..|++||++++.|+++++.+++++|
T Consensus       124 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~g  203 (272)
T 4e3z_A          124 MSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAILGSATQYVDYAASKAAIDTFTIGLAREVAAEG  203 (272)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHHHCCTTTCHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhccCCCCCcchhHHHHHHHHHHHHHHHHHHHHcC
Confidence            899999999999988                    35799999999988766 678899999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |++++|+||++.|++.....  .++..+.+....  |++|+++|+|
T Consensus       204 i~v~~v~PG~v~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~ed  245 (272)
T 4e3z_A          204 IRVNAVRPGIIETDLHASGG--LPDRAREMAPSV--PMQRAGMPEE  245 (272)
T ss_dssp             EEEEEEEECSBC--------------------CC--TTSSCBCHHH
T ss_pred             cEEEEEecCCCcCCcccccC--ChHHHHHHhhcC--CcCCCcCHHH
Confidence            99999999999999865421  233344444444  7788887764

>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}

Probab=99.96  E-value=6.4e-30  Score=190.41  Aligned_cols=163  Identities=17%  Similarity=0.218  Sum_probs=137.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+....        .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        47 ~l~~~G~~V~~~~r~~~~~~~--------~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~  116 (260)
T 3un1_A           47 AYRDRNYRVVATSRSIKPSAD--------PDIHTVAGDISKPETADRIVREGIERFGRIDSLVNNAGVFLA--KPFVEMT  116 (260)
T ss_dssp             HHHHTTCEEEEEESSCCCCSS--------TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHCCCEEEEEeCChhhccc--------CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC--CChhhCC
Confidence            378899999999998543211        3688999999999999999998  778999999999999876  7888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccc--cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATET--IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~--~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .++|+..+++|+.                 .|+||++||..+..  +.++...|++||+++++|+++++.+++++||+||
T Consensus       117 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn  196 (260)
T 3un1_A          117 QEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMVGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVN  196 (260)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBTTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEE
Confidence            9999999999998                 58999999987764  3445688999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++...      +..+.+....  |++|+++|+|
T Consensus       197 ~v~PG~v~t~~~~~------~~~~~~~~~~--p~~r~~~~~d  230 (260)
T 3un1_A          197 AVSPGVIKTPMHPA------ETHSTLAGLH--PVGRMGEIRD  230 (260)
T ss_dssp             EEEECCBCCTTSCG------GGHHHHHTTS--TTSSCBCHHH
T ss_pred             EEeecCCCCCCCCH------HHHHHHhccC--CCCCCcCHHH
Confidence            99999999998532      3333444444  8899998875

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=99.96  E-value=1.8e-30  Score=193.92  Aligned_cols=167  Identities=19%  Similarity=0.175  Sum_probs=141.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+.          ....+.+|+++.+++.+++++  .+++++|+||||||....  ..+.+.+
T Consensus        47 ~la~~G~~V~~~~r~~~~~~----------~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iD~lvnnAg~~~~--~~~~~~~  114 (266)
T 3uxy_A           47 ALRAAGARVAVADRAVAGIA----------ADLHLPGDLREAAYADGLPGAVAAGLGRLDIVVNNAGVISR--GRITETT  114 (266)
T ss_dssp             HHHHTTCEEEECSSCCTTSC----------CSEECCCCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCGGGCC
T ss_pred             HHHHCCCEEEEEeCCHHHHH----------hhhccCcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhCC
Confidence            37889999999999755332          224468999999999999998  778999999999999877  7888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.++...|++||+++++|+++++.+++++||+||+|
T Consensus       115 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v  194 (266)
T 3uxy_A          115 DADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGPGHALYCLTKAALASLTQCMGMDHAPQGIRINAV  194 (266)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCC----ChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGI----DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++.......    .++..+.+....  |++|+++|+|
T Consensus       195 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  236 (266)
T 3uxy_A          195 CPNEVNTPMLRTGFAKRGFDPDRAVAELGRTV--PLGRIAEPED  236 (266)
T ss_dssp             EESSBCCHHHHHHHHHTTCCHHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             eeCCCcchHhhhhhhcccccchHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999987654321    123334444444  8899999875

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=99.96  E-value=2.2e-29  Score=191.15  Aligned_cols=152  Identities=23%  Similarity=0.353  Sum_probs=138.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        50 ~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg~~~~--~~~~~~  127 (301)
T 3tjr_A           50 EFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAGIVVA--GPLAQM  127 (301)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCCCCCC--BCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC--CCcccC
Confidence            37889999999999999998887777543 5799999999999999999998  677899999999999876  788899


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  .|+||++||.++..+.++...|++||+++++|+++|+.+++++||+|+
T Consensus       128 ~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~  207 (301)
T 3tjr_A          128 NHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVPNAGLGTYGVAKYGVVGLAETLAREVKPNGIGVS  207 (301)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCcEEE
Confidence            99999999999998                  369999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchh
Q 042200          140 SIAHIVSATPFFCNA  154 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~  154 (181)
                      +|+||+++|++....
T Consensus       208 ~v~PG~v~T~~~~~~  222 (301)
T 3tjr_A          208 VLCPMVVETKLVSNS  222 (301)
T ss_dssp             EECCSCCCSSHHHHH
T ss_pred             EEECCcccccccccc
Confidence            999999999987653

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=99.96  E-value=2.5e-29  Score=183.94  Aligned_cols=148  Identities=13%  Similarity=0.163  Sum_probs=128.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|+++.+++++++++ ..  ..|+||||||....  .++.+.+.
T Consensus        20 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~--~~d~lv~~Ag~~~~--~~~~~~~~   93 (230)
T 3guy_A           20 LYDAEGKATYLTGRSESKLSTVTNCLSN--NVGYRARDLASHQEVEQLFEQLDS--IPSTVVHSAGSGYF--GLLQEQDP   93 (230)
T ss_dssp             HHHHTTCCEEEEESCHHHHHHHHHTCSS--CCCEEECCTTCHHHHHHHHHSCSS--CCSEEEECCCCCCC--SCGGGSCH
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHhh--ccCeEeecCCCHHHHHHHHHHHhh--cCCEEEEeCCcCCC--CccccCCH
Confidence            3688999999999999999988888755  788999999999999999997 32  23999999998776  88889999


Q ss_pred             HHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           80 EKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      ++|+..+++|+.                .++||++||..+..+.++...|++||+++++|+++++.+++++||+||+|+|
T Consensus        94 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~P  173 (230)
T 3guy_A           94 EQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQPKAQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYP  173 (230)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCCCCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEEC
Confidence            999999999998                3489999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchh
Q 042200          144 IVSATPFFCNA  154 (181)
Q Consensus       144 g~v~t~~~~~~  154 (181)
                      |++.|++....
T Consensus       174 G~v~t~~~~~~  184 (230)
T 3guy_A          174 GGMATEFWETS  184 (230)
T ss_dssp             CCC--------
T ss_pred             CcccChHHHhc
Confidence            99999987654

>3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ...

Probab=99.96  E-value=2.4e-30  Score=198.69  Aligned_cols=155  Identities=13%  Similarity=0.183  Sum_probs=129.0

Q ss_pred             CcccCCCEEEEeecch---------HHHHHHHhHcCCC----CceEEEeeecCCh--h------------------HHHH
Q 042200            1 VFIQHRAKVIIADVQD---------DLCRALCKEFDSD----ELISYVCCNVTID--S------------------DVKN   47 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~----~~~~~~~~D~~~~--~------------------~i~~   47 (181)
                      +|+++|++|++++|+.         ++++.........    ..+.++.+|+++.  +                  ++.+
T Consensus        23 ~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~  102 (329)
T 3lt0_A           23 ELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIED  102 (329)
T ss_dssp             HHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHH
T ss_pred             HHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhhhhhhhcccccccccCHHHHHH
Confidence            3789999999777654         3333332322221    3478899999988  8                  9999


Q ss_pred             HHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCccc
Q 042200           48 VFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEAL  110 (181)
Q Consensus        48 ~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~  110 (181)
                      ++++  .+++++|+||||||+......++.+.+.++|+..+++|+.               .|+||++||.++..+.+..
T Consensus       103 ~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~~~  182 (329)
T 3lt0_A          103 VANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGY  182 (329)
T ss_dssp             HHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTC
T ss_pred             HHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCCcc
Confidence            9998  7789999999999975321278888999999999999998               5899999999999999988


Q ss_pred             h-hhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhc
Q 042200          111 Y-DYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus       111 ~-~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~  155 (181)
                      . .|++||+++.+|+++|+.++++ +||+||+|+||+|+|+|+..+.
T Consensus       183 ~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~  229 (329)
T 3lt0_A          183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAIN  229 (329)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC
T ss_pred             hHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhh
Confidence            5 9999999999999999999998 8999999999999999987653

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=99.96  E-value=5.3e-29  Score=183.82  Aligned_cols=154  Identities=23%  Similarity=0.256  Sum_probs=134.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeec--CChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNV--TIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~--~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|+.+++++..+++...  ..+.++.+|+  ++.+++.+++++  .+++++|+||||||..... .++
T Consensus        33 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~-~~~  111 (247)
T 3i1j_A           33 AYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEFGRLDGLLHNASIIGPR-TPL  111 (247)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC-SCG
T ss_pred             HHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhCCCCCEEEECCccCCCC-CCc
Confidence            37889999999999999888877766432  3566777777  999999999998  6778999999999986432 678


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC-CCe
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ-YDI  136 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~-~~i  136 (181)
                      .+.+.++|++.+++|+.                 .++||++||..+..+.+++..|+++|+++++|+++|+.++.+ +||
T Consensus       112 ~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i  191 (247)
T 3i1j_A          112 EQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGRKGRANWGAYGVSKFATEGLMQTLADELEGVTAV  191 (247)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTSSE
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhcCCCCe
Confidence            88999999999999998                 589999999999999999999999999999999999999986 899


Q ss_pred             EEEEEecCcccCcccchhc
Q 042200          137 RVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~~  155 (181)
                      +||+|+||+++|++.....
T Consensus       192 ~v~~v~PG~v~t~~~~~~~  210 (247)
T 3i1j_A          192 RANSINPGATRTGMRAQAY  210 (247)
T ss_dssp             EEEEEECCCCSSHHHHHHS
T ss_pred             EEEEEecCcccCccchhcc
Confidence            9999999999999875543

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=99.96  E-value=2.9e-29  Score=184.57  Aligned_cols=168  Identities=20%  Similarity=0.266  Sum_probs=140.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.++..   +++    .+.++.+|+++ +++++++++  ..++++|+||||||....  .++.+.+
T Consensus        21 ~l~~~G~~V~~~~r~~~~~~---~~~----~~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~   90 (239)
T 2ekp_A           21 ALVARGYRVAIASRNPEEAA---QSL----GAVPLPTDLEK-DDPKGLVKRALEALGGLHVLVHAAAVNVR--KPALELS   90 (239)
T ss_dssp             HHHHTTCEEEEEESSCHHHH---HHH----TCEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEECCCCCCC--CCTTTCC
T ss_pred             HHHHCCCEEEEEeCCHHHHH---Hhh----CcEEEecCCch-HHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCC
Confidence            36789999999999977632   333    16788999999 999999988  677899999999998765  7788899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccC--ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIG--EALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~--~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .++|+..+++|+.                 .|+||++||..+..+.  ++...|+++|++++.|+++++.+++++||++|
T Consensus        91 ~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  170 (239)
T 2ekp_A           91 YEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGGPVPIPAYTTAKTALLGLTRALAKEWARLGIRVN  170 (239)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            9999999999997                 4899999999998877  88899999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++...... .++..+.+....  |++|+++|+|
T Consensus       171 ~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~d  209 (239)
T 2ekp_A          171 LLCPGYVETEFTLPLRQ-NPELYEPITARI--PMGRWARPEE  209 (239)
T ss_dssp             EEEECSBCSGGGHHHHT-CHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEeCCccCchhhcccc-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998765432 334444444444  7889988875

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=99.96  E-value=1.9e-29  Score=190.38  Aligned_cols=171  Identities=20%  Similarity=0.234  Sum_probs=142.2

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcC-C-CCceEEEeeecCC----hhHHHHHHHh--cccCCccEEEEcccccCCCCC
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFD-S-DELISYVCCNVTI----DSDVKNVFDF--TKFGKLDIMFNNAGIISNMDR   72 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~-~-~~~~~~~~~D~~~----~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~   72 (181)
                      |+++|++|++++|+. +.+++..+++. . ..++.++.+|+++    .+++++++++  .+++++|+||||||....  .
T Consensus        43 L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~--~  120 (288)
T 2x9g_A           43 LHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCFRAFGRCDVLVNNASAFYP--T  120 (288)
T ss_dssp             HHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--C
T ss_pred             HHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--C
Confidence            678999999999998 77777766653 1 1478999999999    9999999998  678899999999998765  5


Q ss_pred             Cc-----cc-----CCHHHHHHhhheeec----------------c-------eeEEEeccccccccCccchhhHhhHHH
Q 042200           73 TT-----LD-----TDNEKVKRVMIMVVF----------------L-------GVLLFTANLATETIGEALYDYLMSKYA  119 (181)
Q Consensus        73 ~~-----~~-----~~~~~~~~~~~~n~~----------------~-------~~iv~iss~~~~~~~~~~~~y~~sK~a  119 (181)
                      ++     .+     .+.++|+..+++|+.                .       |+||++||..+..+.+++..|++||++
T Consensus       121 ~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asKaa  200 (288)
T 2x9g_A          121 PLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCMAFSLYNMGKHA  200 (288)
T ss_dssp             CSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEECCTTTTSCCTTCHHHHHHHHH
T ss_pred             ccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCCCCchHHHHHHH
Confidence            55     55     778899999999987                1       589999999999999999999999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccc-cccCC
Q 042200          120 VLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVV-LKAAD  181 (181)
Q Consensus       120 ~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e  181 (181)
                      +++|+++++.+++++||+||+|+||++.|++ . .   .++..+.+....  |++|+ ++|+|
T Consensus       201 ~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~-~---~~~~~~~~~~~~--p~~r~~~~ped  256 (288)
T 2x9g_A          201 LVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A-M---GEEEKDKWRRKV--PLGRREASAEQ  256 (288)
T ss_dssp             HHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T-S---CHHHHHHHHHTC--TTTSSCCCHHH
T ss_pred             HHHHHHHHHHHhhccCeEEEEEEeccccCcc-c-c---ChHHHHHHHhhC--CCCCCCCCHHH
Confidence            9999999999999999999999999999998 3 2   233344444445  78888 88864

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.96  E-value=1.9e-29  Score=186.29  Aligned_cols=171  Identities=23%  Similarity=0.319  Sum_probs=141.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.+++++.. ++.   ++.++.+|++|.++++++++  +++++|+||||||....  .++.+.+.+
T Consensus        25 ~l~~~G~~V~~~~r~~~~~~~~~-~~~---~~~~~~~D~~~~~~~~~~~~--~~~~id~lv~~Ag~~~~--~~~~~~~~~   96 (246)
T 2ag5_A           25 AFAREGAKVIATDINESKLQELE-KYP---GIQTRVLDVTKKKQIDQFAN--EVERLDVLFNVAGFVHH--GTVLDCEEK   96 (246)
T ss_dssp             HHHHTTCEEEEEESCHHHHGGGG-GST---TEEEEECCTTCHHHHHHHHH--HCSCCSEEEECCCCCCC--BCGGGCCHH
T ss_pred             HHHHCCCEEEEEECCHHHHHHHH-hcc---CceEEEeeCCCHHHHHHHHH--HhCCCCEEEECCccCCC--CCcccCCHH
Confidence            36789999999999988776554 442   58899999999999996666  56789999999998766  778889999


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccCc-cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIGE-ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~-~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +|+..+++|+.                 .|+||++||..+..+.+ +...|+++|++++.|+++++.+++++||++|+|+
T Consensus        97 ~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  176 (246)
T 2ag5_A           97 DWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVC  176 (246)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCCCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEe
Confidence            99999999998                 48999999999888877 8899999999999999999999999999999999


Q ss_pred             cCcccCcccchhcC--C-ChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMG--I-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++......  . .++..+.+....  |++|+++|+|
T Consensus       177 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  216 (246)
T 2ag5_A          177 PGTVDTPSLQERIQARGNPEEARNDFLKRQ--KTGRFATAEE  216 (246)
T ss_dssp             ESCEECHHHHHHHHHSSSHHHHHHHHHHTC--TTSSCEEHHH
T ss_pred             eCcCcCcchhhhhhcccCcHHHHHHHHhcC--CCCCCCCHHH
Confidence            99999998655221  1 123334444444  7789888875

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=99.96  E-value=3.1e-29  Score=188.45  Aligned_cols=149  Identities=17%  Similarity=0.230  Sum_probs=136.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+
T Consensus        24 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~   99 (281)
T 3m1a_A           24 AAVAAGDTVIGTARRTEALDDLVAAYPD--RAEAISLDVTDGERIDVVAADVLARYGRVDVLVNNAGRTQV--GAFEETT   99 (281)
T ss_dssp             HHHHTTCEEEEEESSGGGGHHHHHHCTT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCEEE--CCTTTCC
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHhccC--CceEEEeeCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC--CChhhCC
Confidence            3688999999999999888888777655  799999999999999999998  778899999999998766  7788899


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .++||++||..+..+.++...|++||++++.|+++++.+++++||++++|
T Consensus       100 ~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v  179 (281)
T 3m1a_A          100 ERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLSFAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIV  179 (281)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEE
Confidence            9999999999998                 58999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccch
Q 042200          142 AHIVSATPFFCN  153 (181)
Q Consensus       142 ~Pg~v~t~~~~~  153 (181)
                      +||++.|++...
T Consensus       180 ~Pg~v~t~~~~~  191 (281)
T 3m1a_A          180 EPGAFRTNLFGK  191 (281)
T ss_dssp             EECCBCCTTTCC
T ss_pred             ecCccccccccc
Confidence            999999998654

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=99.96  E-value=8.9e-30  Score=187.88  Aligned_cols=167  Identities=24%  Similarity=0.350  Sum_probs=138.8

Q ss_pred             ccc-CCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQ-HRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |++ .|+.|++++|+.+..         ...+.++.+|++|.++++++++..+++++|+||||||....  .++.+.+.+
T Consensus        24 l~~~~g~~v~~~~~~~~~~---------~~~~~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~nAg~~~~--~~~~~~~~~   92 (244)
T 4e4y_A           24 LLQNKNHTVINIDIQQSFS---------AENLKFIKADLTKQQDITNVLDIIKNVSFDGIFLNAGILIK--GSIFDIDIE   92 (244)
T ss_dssp             HTTSTTEEEEEEESSCCCC---------CTTEEEEECCTTCHHHHHHHHHHTTTCCEEEEEECCCCCCC--BCTTTSCHH
T ss_pred             HHhcCCcEEEEeccccccc---------cccceEEecCcCCHHHHHHHHHHHHhCCCCEEEECCccCCC--CCcccCCHH
Confidence            566 788899998875410         13678999999999999999966337899999999999876  788899999


Q ss_pred             HHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCc
Q 042200           81 KVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIV  145 (181)
Q Consensus        81 ~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~  145 (181)
                      +|+..+++|+.               .|+||++||..+..+.++...|++||+++++|+++|+.|++++||+||+|+||+
T Consensus        93 ~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~  172 (244)
T 4e4y_A           93 SIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAKPNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGT  172 (244)
T ss_dssp             HHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESC
T ss_pred             HHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCCCCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCc
Confidence            99999999998               569999999999999999999999999999999999999999999999999999


Q ss_pred             ccCcccchhcCCC--------hHHHHHHHHHhhcccccccccCC
Q 042200          146 SATPFFCNAMGID--------KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       146 v~t~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +.|++........        ++..+......  |++|+++|+|
T Consensus       173 v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~p~d  214 (244)
T 4e4y_A          173 VDTDLYRNLIQKYANNVGISFDEAQKQEEKEF--PLNRIAQPQE  214 (244)
T ss_dssp             BCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             cCchhhHHHHHhhhhhcCCCHHHHHHHHhhcC--CCCCCcCHHH
Confidence            9999876653211        11333333344  8899999875

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=99.96  E-value=2e-28  Score=183.56  Aligned_cols=181  Identities=44%  Similarity=0.740  Sum_probs=148.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+..+...+++....++.++.+|++|.+++++++++  .+++++|+||||||.......++.+.+
T Consensus        35 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~  114 (278)
T 2bgk_A           35 LFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAG  114 (278)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCC
T ss_pred             HHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCC
Confidence            367899999999999888777777665434689999999999999999998  677899999999998653225677788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCc-cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGE-ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~-~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+..+++|+.                 .++||++||..+..+.+ +...|+++|++++.|+++++.+++++||++++
T Consensus       115 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  194 (278)
T 2bgk_A          115 NEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNC  194 (278)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCCCCCCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEE
Confidence            9999999999988                 47999999999988877 78899999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+.|++........++..+.+....+.|++++.+|+|
T Consensus       195 v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d  235 (278)
T 2bgk_A          195 VSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED  235 (278)
T ss_dssp             EEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred             EEeceecchhhhhhcccchhHHHHhhhcccccccccCCHHH
Confidence            99999999987665443444444444443335677777764

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=99.96  E-value=4.8e-29  Score=185.38  Aligned_cols=175  Identities=22%  Similarity=0.276  Sum_probs=145.7

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++| +.+.+++..+++... .++.++.+|+++.+++.+++++  .+++++|+||||||....  .++.+.
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~  104 (261)
T 1gee_A           27 FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHEM  104 (261)
T ss_dssp             HHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccC
Confidence            6789999999999 777777666655322 4788999999999999999988  667899999999998765  677788


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  .++||++||..+..+.++...|+++|++++.++++++.+++++||+++
T Consensus       105 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  184 (261)
T 1gee_A          105 SLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVN  184 (261)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCCCCCccHHHHHHHHHHHHHHHHHHHhcccCeEEE
Confidence            99999999999987                  259999999999988899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||.+.|++...... .++..+.+....  |++++.+|+|
T Consensus       185 ~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  223 (261)
T 1gee_A          185 NIGPGAINTPINAEKFA-DPEQRADVESMI--PMGYIGEPEE  223 (261)
T ss_dssp             EEEECSBCSGGGHHHHH-SHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEeeCCcCCchhhhccc-ChhHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998765432 233334433333  6788888764

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.3e-29  Score=188.64  Aligned_cols=151  Identities=19%  Similarity=0.196  Sum_probs=126.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cc-cCCccEEEEccc--cc-----CC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TK-FGKLDIMFNNAG--II-----SN   69 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~-~~~id~vi~~ag--~~-----~~   69 (181)
                      +|+++|++|++++|+.+.+++..+++... .++.++.+|++|.++++++++.  .+ ++++|+||||||  ..     ..
T Consensus        24 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~  103 (260)
T 2qq5_A           24 QLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRN  103 (260)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTT
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCceEEEECCccccccccccCC
Confidence            36889999999999988887776665321 3788999999999999999988  33 899999999995  32     22


Q ss_pred             CCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           70 MDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                        .++.+.+.++|+..+++|+.                 .|+||++||..+..+. +...|++||+++++|+++++.+++
T Consensus       104 --~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-~~~~Y~asK~a~~~~~~~la~e~~  180 (260)
T 2qq5_A          104 --KAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISSPGSLQYM-FNVPYGVGKAACDKLAADCAHELR  180 (260)
T ss_dssp             --CCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECCGGGTSCC-SSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcChhhcCCC-CCCchHHHHHHHHHHHHHHHHHhc
Confidence              56677888999999999976                 4899999999887654 468899999999999999999999


Q ss_pred             CCCeEEEEEecCcccCcccchh
Q 042200          133 QYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ++||+||+|+||+++|++....
T Consensus       181 ~~gi~v~~v~PG~v~T~~~~~~  202 (260)
T 2qq5_A          181 RHGVSCVSLWPGIVQTELLKEH  202 (260)
T ss_dssp             GGTCEEEEEECCCSCTTTC---
T ss_pred             cCCeEEEEEecCccccHHHHHh
Confidence            9999999999999999987654

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=99.96  E-value=9.7e-29  Score=186.23  Aligned_cols=173  Identities=21%  Similarity=0.250  Sum_probs=143.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+++++..+++... .++.++.+|++|.+++++++++  ..++++|+||||||....  .++.+.+
T Consensus        64 L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~~  141 (285)
T 2c07_A           64 LAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD--NLFLRMK  141 (285)
T ss_dssp             HTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCC--CCTTTCC
T ss_pred             HHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CchhhCC
Confidence            6889999999999988888777666442 4788999999999999999988  677899999999998766  7778889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.++++.||++++|
T Consensus       142 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v  221 (285)
T 2c07_A          142 NDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAI  221 (285)
T ss_dssp             HHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCCCCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEE
Confidence            9999999999998                 38999999999998889999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.+.|++....   .++..+.+....  |++|+.+|+|
T Consensus       222 ~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  256 (285)
T 2c07_A          222 APGFISSDMTDKI---SEQIKKNIISNI--PAGRMGTPEE  256 (285)
T ss_dssp             EECSBCC-----C---CHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EeCcEecCchhhc---CHHHHHHHHhhC--CCCCCCCHHH
Confidence            9999999986543   233333333333  6788877764

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=99.96  E-value=3.3e-29  Score=188.11  Aligned_cols=147  Identities=23%  Similarity=0.236  Sum_probs=127.3

Q ss_pred             CcccCCCEEEEeecc------------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccc
Q 042200            1 VFIQHRAKVIIADVQ------------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAG   65 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag   65 (181)
                      +|+++|++|++++|+            .+.+++..+.+... .++.++.+|++|.+++++++++  .+++++|+||||||
T Consensus        32 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg  111 (278)
T 3sx2_A           32 RLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSAALQAGLDELGRLDIVVANAG  111 (278)
T ss_dssp             HHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCC
T ss_pred             HHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            378899999999987            66666665544322 4799999999999999999998  77899999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccC----ccchhhHhhHHHHHHH
Q 042200           66 IISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIG----EALYDYLMSKYAVLGL  123 (181)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~----~~~~~y~~sK~a~~~l  123 (181)
                      ....  ..    +.++|+..+++|+.                  .|+||++||.++..+.    ++...|++||+++++|
T Consensus       112 ~~~~--~~----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~Y~asKaa~~~~  185 (278)
T 3sx2_A          112 IAPM--SA----GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGLAGVGSADPGSVGYVAAKHGVVGL  185 (278)
T ss_dssp             CCCC--SS----THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSCCCCSSHHHHHHHHHHHHHHHH
T ss_pred             CCCC--CC----CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhcCCCccCCCCchHhHHHHHHHHHH
Confidence            8654  22    57899999999998                  3799999999998877    7788999999999999


Q ss_pred             HHHHHHHhcCCCeEEEEEecCcccCcccch
Q 042200          124 MKNLCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       124 ~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +++|+.+++++||+||+|+||+|.|++...
T Consensus       186 ~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  215 (278)
T 3sx2_A          186 MRVYANLLAGQMIRVNSIHPSGVETPMINN  215 (278)
T ss_dssp             HHHHHHHHGGGTEEEEEEEESCBSSTTTSS
T ss_pred             HHHHHHHHhccCcEEEEEecCCccCccchh
Confidence            999999999999999999999999998654

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=99.96  E-value=3.4e-29  Score=193.30  Aligned_cols=151  Identities=19%  Similarity=0.182  Sum_probs=130.9

Q ss_pred             CcccCCCEEEEeecchHH-------HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIADVQDDL-------CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~-------~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~   70 (181)
                      +|+++|++|++++|+.++       +++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||.... 
T Consensus        64 ~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~-  142 (346)
T 3kvo_A           64 KAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAIKKFGGIDILVNNASAISL-  142 (346)
T ss_dssp             HHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC-
T ss_pred             HHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-
Confidence            378999999999998653       33344443322 4799999999999999999998  778999999999999876 


Q ss_pred             CCCcccCCHHHHHHhhheeec-----------------ceeEEEecccccccc--CccchhhHhhHHHHHHHHHHHHHHh
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETI--GEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~--~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                       ..+.+.+.++|+.++++|+.                 .|+||++||..+..+  .+++..|++||+++++|+++|+.|+
T Consensus       143 -~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~~~~~~~~~~~~Y~aSKaal~~l~~~la~e~  221 (346)
T 3kvo_A          143 -TNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLNLNPVWFKQHCAYTIAKYGMSMYVLGMAEEF  221 (346)
T ss_dssp             -CCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCCCCGGGTSSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -CCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHHcCCCCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence             78888999999999999998                 489999999998877  7888999999999999999999999


Q ss_pred             cCCCeEEEEEecCc-ccCcccchh
Q 042200          132 GQYDIRVNSIAHIV-SATPFFCNA  154 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~-v~t~~~~~~  154 (181)
                      + +||+||+|+||+ +.|++.+.+
T Consensus       222 ~-~gIrvn~v~PG~~i~T~~~~~~  244 (346)
T 3kvo_A          222 K-GEIAVNALWPKTAIHTAAMDML  244 (346)
T ss_dssp             T-TTCEEEEEECSBCBCCHHHHHH
T ss_pred             c-CCcEEEEEeCCCccccHHHHhh
Confidence            9 899999999995 999876544

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=99.96  E-value=1.5e-28  Score=181.95  Aligned_cols=173  Identities=21%  Similarity=0.262  Sum_probs=147.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCce-EEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELI-SYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++..  ++ .++.+|++|.++++++++. ..++++|+||||||....  ..+.+.+.
T Consensus        31 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~~~  106 (254)
T 2wsb_A           31 FAASGARLILIDREAAALDRAAQELGA--AVAARIVADVTDAEAMTAAAAEAEAVAPVSILVNSAGIARL--HDALETDD  106 (254)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEEECCTTCHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCSTTCCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhcc--cceeEEEEecCCHHHHHHHHHHHHhhCCCcEEEECCccCCC--CCcccCCH
Confidence            678999999999999888877776643  56 8899999999999999998 338899999999998766  67778899


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      ++|+..+++|+.                 .++||++||..+..+.+..  ..|+++|++++.++++++.+++++||++++
T Consensus       107 ~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~  186 (254)
T 2wsb_A          107 ATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNRPQFASSYMASKGAVHQLTRALAAEWAGRGVRVNA  186 (254)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCCCCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEE
Confidence            999999999987                 4899999999988877777  899999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+.|++...... .++..+.+....  |++++.+|+|
T Consensus       187 v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  224 (254)
T 2wsb_A          187 LAPGYVATEMTLKMRE-RPELFETWLDMT--PMGRCGEPSE  224 (254)
T ss_dssp             EEECCBCSHHHHHHHT-CHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             EEecccCchhhhcccc-ChHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999998765432 345555555555  7788888764

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=99.96  E-value=1.6e-29  Score=190.50  Aligned_cols=149  Identities=18%  Similarity=0.150  Sum_probs=129.0

Q ss_pred             CcccCCCEEEEeecc------------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccc
Q 042200            1 VFIQHRAKVIIADVQ------------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAG   65 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~------------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag   65 (181)
                      +|+++|++|++++|+            .+.+++...++... .++.++.+|++|.+++++++++  .+++++|+||||||
T Consensus        29 ~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg  108 (287)
T 3pxx_A           29 KLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAG  108 (287)
T ss_dssp             HHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred             HHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence            378899999999997            66666655554332 4799999999999999999998  77899999999999


Q ss_pred             ccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccC-----------ccchhhHhhHHH
Q 042200           66 IISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIG-----------EALYDYLMSKYA  119 (181)
Q Consensus        66 ~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a  119 (181)
                      ....  .  .+.+.++|+..+++|+.               .++||++||..+..+.           ++...|+++|++
T Consensus       109 ~~~~--~--~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a  184 (287)
T 3pxx_A          109 ICPL--G--AHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAGLIAAAQPPGAGGPQGPGGAGYSYAKQL  184 (287)
T ss_dssp             CCCC--C--TTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHHHHHHHCCC-----CHHHHHHHHHHHHH
T ss_pred             cCcc--c--CcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchhcccccccccccccCCCccchHHHHHHH
Confidence            8765  3  33788999999999998               5799999999888765           677889999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccCcccch
Q 042200          120 VLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       120 ~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +++|+++++.+++++||+||+|+||++.|++...
T Consensus       185 ~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~  218 (287)
T 3pxx_A          185 VDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNS  218 (287)
T ss_dssp             HHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSS
T ss_pred             HHHHHHHHHHHHhhcCcEEEEEecCccccccccc
Confidence            9999999999999999999999999999998754

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=99.96  E-value=1.4e-28  Score=182.70  Aligned_cols=174  Identities=20%  Similarity=0.256  Sum_probs=146.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccC-CCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIIS-NMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~-~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||... .  .++.+.
T Consensus        33 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~--~~~~~~  110 (260)
T 3awd_A           33 LAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVDILVACAGICISE--VKAEDM  110 (260)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCS--CCTTTC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCC--CCcccC
Confidence            6789999999999988777766665322 4789999999999999999988  66789999999999876 3  667788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.++.  ..|+++|++++.|+++++.+++++||++
T Consensus       111 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v  190 (260)
T 3awd_A          111 TDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVNRPQQQAAYNASKAGVHQYIRSLAAEWAPHGIRA  190 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCSSSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             CHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccCCCCCccccHHHHHHHHHHHHHHHHHhhhcCeEE
Confidence            89999999999987                 4799999999988877766  8999999999999999999999999999


Q ss_pred             EEEecCcccCcccc-hhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFC-NAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+||++.|++.. ...  .++..+.+....  |++++.+|+|
T Consensus       191 ~~v~pg~v~t~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  230 (260)
T 3awd_A          191 NAVAPTYIETTLTRFGME--KPELYDAWIAGT--PMGRVGQPDE  230 (260)
T ss_dssp             EEEEECCBCCTTTHHHHT--CHHHHHHHHHTC--TTSSCBCHHH
T ss_pred             EEEEeeeeccchhhcccC--ChHHHHHHHhcC--CcCCCCCHHH
Confidence            99999999999876 332  344455555555  7788888764

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=99.96  E-value=4.6e-29  Score=186.06  Aligned_cols=174  Identities=22%  Similarity=0.267  Sum_probs=119.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|+++.+++++++++  ..+ +++|+||||||....  .++.+.
T Consensus        34 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~  111 (266)
T 1xq1_A           34 FAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS--KPTLDY  111 (266)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC--------CCC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCCCcEEEECCCCCCC--CChhhC
Confidence            6789999999999988887776665332 4688999999999999999988  566 789999999998765  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.+++++||++++
T Consensus       112 ~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  191 (266)
T 1xq1_A          112 TAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANA  191 (266)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccCCCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEE
Confidence            99999999999988                 4799999999998888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+.|++.....  .+...+......  |++|+++|+|
T Consensus       192 v~Pg~v~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  228 (266)
T 1xq1_A          192 VAPAVIATPLAEAVY--DDEFKKVVISRK--PLGRFGEPEE  228 (266)
T ss_dssp             EECCSCC-----------------------------CCGGG
T ss_pred             EeeCCCccchhhhhc--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999876543  223333344444  7788888875

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=99.96  E-value=5.2e-29  Score=184.44  Aligned_cols=166  Identities=19%  Similarity=0.145  Sum_probs=123.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.        .. ..+.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        27 l~~~G~~V~~~~r~~~~--------~~-~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~~   95 (250)
T 2fwm_X           27 FVEAGAKVTGFDQAFTQ--------EQ-YPFATEVMDVADAAQVAQVCQRLLAETERLDALVNAAGILRM--GATDQLSK   95 (250)
T ss_dssp             HHHTTCEEEEEESCCCS--------SC-CSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCC--CCTTTSCH
T ss_pred             HHHCCCEEEEEeCchhh--------hc-CCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCCH
Confidence            67899999999998651        11 1277889999999999999998  778899999999998765  77888999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|+|+
T Consensus        96 ~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  175 (250)
T 2fwm_X           96 EDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTPRIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVS  175 (250)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             HHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEE
Confidence            999999999998                 489999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHH-HHHH-------HhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFK-ELLY-------ASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~-~~~~-------~~~~~~~~~~~~~e  181 (181)
                      ||++.|++...... .++..+ .+..       ..  |++|+++|+|
T Consensus       176 Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~d  219 (250)
T 2fwm_X          176 PGSTDTDMQRTLWV-SDDAEEQRIRGFGEQFKLGI--PLGKIARPQE  219 (250)
T ss_dssp             ECCC---------------------------------------CHHH
T ss_pred             CCcccCcccccccc-ChhHHHHHHhhhhhcccccC--CCCCCcCHHH
Confidence            99999998654321 111112 2222       34  7788888865

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=99.96  E-value=4.6e-29  Score=191.02  Aligned_cols=152  Identities=22%  Similarity=0.291  Sum_probs=135.8

Q ss_pred             CcccCCCEEEEeecc----------hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEccccc
Q 042200            1 VFIQHRAKVIIADVQ----------DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGII   67 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~----------~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~   67 (181)
                      +|+++|++|++++|+          .+.+++..+++... .++.++.+|++|.+++.+++++  .+++++|+||||||..
T Consensus        46 ~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~  125 (322)
T 3qlj_A           46 AFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIV  125 (322)
T ss_dssp             HHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCC
T ss_pred             HHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence            378899999999997          66777766666433 5789999999999999999998  7789999999999998


Q ss_pred             CCCCCCcccCCHHHHHHhhheeec----------------c-------eeEEEeccccccccCccchhhHhhHHHHHHHH
Q 042200           68 SNMDRTTLDTDNEKVKRVMIMVVF----------------L-------GVLLFTANLATETIGEALYDYLMSKYAVLGLM  124 (181)
Q Consensus        68 ~~~~~~~~~~~~~~~~~~~~~n~~----------------~-------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  124 (181)
                      ..  ..+.+.+.++|+..+++|+.                .       |+||++||..+..+.++...|++||+++++|+
T Consensus       126 ~~--~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~~~~~~Y~asKaal~~l~  203 (322)
T 3qlj_A          126 RD--RMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAGLQGSVGQGNYSAAKAGIATLT  203 (322)
T ss_dssp             CC--CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHHHHCBTTCHHHHHHHHHHHHHH
T ss_pred             CC--CCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHHccCCCCCccHHHHHHHHHHHH
Confidence            77  78889999999999999998                1       79999999999999999999999999999999


Q ss_pred             HHHHHHhcCCCeEEEEEecCcccCcccchhc
Q 042200          125 KNLCVELGQYDIRVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus       125 ~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~  155 (181)
                      ++++.+++++||+||+|+|| +.|++.....
T Consensus       204 ~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~  233 (322)
T 3qlj_A          204 LVGAAEMGRYGVTVNAIAPS-ARTRMTETVF  233 (322)
T ss_dssp             HHHHHHHGGGTEEEEEEEEC-TTSCCSCCSC
T ss_pred             HHHHHHhcccCcEEEEecCC-CCCccchhhh
Confidence            99999999999999999999 9999876543

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=99.96  E-value=7.7e-29  Score=182.51  Aligned_cols=174  Identities=17%  Similarity=0.201  Sum_probs=144.3

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++ +|+.+.+++..+++... .++.++.+|+++.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        20 ~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~   97 (244)
T 1edo_A           20 SLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD--TLLIR   97 (244)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--cCccc
Confidence            367899999984 88887777665554321 3788999999999999999998  778899999999998766  77788


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|++.++.+++++||+++
T Consensus        98 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~  177 (244)
T 1edo_A           98 MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN  177 (244)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred             CCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCCCCCccchhhHHHHHHHHHHHHHHhhhcCCEEE
Confidence            899999999999988                 479999999999888899999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++....   .+...+......  |++|+.+|+|
T Consensus       178 ~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  214 (244)
T 1edo_A          178 VVCPGFIASDMTAKL---GEDMEKKILGTI--PLGRTGQPEN  214 (244)
T ss_dssp             EEEECSBCSHHHHTT---CHHHHHHHHTSC--TTCSCBCHHH
T ss_pred             EEeeCccccchhhhc---ChHHHHHHhhcC--CCCCCCCHHH
Confidence            999999999986553   233333333333  6788877764

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=99.96  E-value=1.6e-28  Score=181.59  Aligned_cols=174  Identities=21%  Similarity=0.286  Sum_probs=144.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.+++..+++....++.++.+|+++.+++.++++.  .+++++|+||||||....  .++.+.+.
T Consensus        26 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~~~  103 (251)
T 1zk4_A           26 FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN--KSVEETTT  103 (251)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCTTTCCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCC--CChhhCCH
Confidence            67899999999999988887777765334789999999999999999998  677899999999998765  67778899


Q ss_pred             HHHHHhhheeec-----------------c-eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEEE
Q 042200           80 EKVKRVMIMVVF-----------------L-GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVN  139 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~-~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v~  139 (181)
                      ++|+..+++|+.                 . ++||++||..+..+.++...|+++|++++.|+++++.++.  ++||+++
T Consensus       104 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~  183 (251)
T 1zk4_A          104 AEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVN  183 (251)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred             HHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCCCCCccchHHHHHHHHHHHHHHHHhcccCCCeEEE
Confidence            999999999986                 2 7999999999999889999999999999999999999988  8899999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||++.|++.....  .+.....+....  |++++.+|+|
T Consensus       184 ~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  221 (251)
T 1zk4_A          184 TVHPGYIKTPLVDDLP--GAEEAMSQRTKT--PMGHIGEPND  221 (251)
T ss_dssp             EEEECCBCCHHHHTST--THHHHHTSTTTC--TTSSCBCHHH
T ss_pred             EEeeCcCcchhhhhcC--chhhhHHHhhcC--CCCCCcCHHH
Confidence            9999999999876532  111111111222  6777777764

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=99.96  E-value=2.6e-28  Score=180.68  Aligned_cols=173  Identities=26%  Similarity=0.361  Sum_probs=145.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+ +.+
T Consensus        31 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~--~~~-~~~  107 (255)
T 1fmc_A           31 FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPF-DMP  107 (255)
T ss_dssp             HHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCT-TCC
T ss_pred             HHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCC-CCC
Confidence            6789999999999988887776665322 4788999999999999999988  667899999999998765  455 678


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|++.++.+++++||+++++
T Consensus       108 ~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v  187 (255)
T 1fmc_A          108 MADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGI  187 (255)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCCCCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEE
Confidence            8999999999998                 47999999999998888999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.+.|++.....  .++..+......  |++++++|+|
T Consensus       188 ~Pg~v~t~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~d  223 (255)
T 1fmc_A          188 APGAILTDALKSVI--TPEIEQKMLQHT--PIRRLGQPQD  223 (255)
T ss_dssp             EECSBCSHHHHTTC--CHHHHHHHHHTC--SSCSCBCHHH
T ss_pred             ecccCcchhhhhcc--ChHHHHHHHhcC--CcccCCCHHH
Confidence            99999999865432  344445555544  7788888764

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=99.96  E-value=9.2e-30  Score=188.86  Aligned_cols=163  Identities=17%  Similarity=0.231  Sum_probs=130.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++++          .+.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        41 l~~~G~~V~~~~r~~~~~~----------~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~--~~~~~~~~  108 (253)
T 2nm0_A           41 FADAGDKVAITYRSGEPPE----------GFLAVKCDITDTEQVEQAYKEIEETHGPVEVLIANAGVTKD--QLLMRMSE  108 (253)
T ss_dssp             HHHTTCEEEEEESSSCCCT----------TSEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEECSCCTT--TC---CCT
T ss_pred             HHHCCCEEEEEeCChHhhc----------cceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            6789999999999764321          367899999999999999998  778999999999998765  67778888


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||.++..+.++...|+++|++++.|+++++.+++++||++|+|+
T Consensus       109 ~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~  188 (253)
T 2nm0_A          109 EDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSAGQANYAASKAGLVGFARSLARELGSRNITFNVVA  188 (253)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEE
Confidence            999999999987                 479999999999888888899999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+++|++.....   ++..+.+....  |++|+.+|+|
T Consensus       189 PG~v~T~~~~~~~---~~~~~~~~~~~--p~~~~~~p~d  222 (253)
T 2nm0_A          189 PGFVDTDMTKVLT---DEQRANIVSQV--PLGRYARPEE  222 (253)
T ss_dssp             ECSBCC------------CHHHHHTTC--TTCSCBCHHH
T ss_pred             eCcCcCcchhhcC---HHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999876532   22233333334  7788888864

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=99.96  E-value=8.7e-29  Score=181.48  Aligned_cols=152  Identities=16%  Similarity=0.192  Sum_probs=133.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+++++..+++..  ..++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+
T Consensus        21 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~   98 (235)
T 3l77_A           21 ALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDVVVANAGLGYF--KRLEE   98 (235)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCEEEECCccccc--cCccc
Confidence            3688999999999999888887766542  14799999999999999999998  677899999999999876  78888


Q ss_pred             CCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|+..+++|+.                .+.+|+++|..+..+.+....|+++|+++++|+++++  +...||++|+
T Consensus        99 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~~~~~~Y~~sKaa~~~~~~~l~--~~~~~i~v~~  176 (235)
T 3l77_A           99 LSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLIPYGGGYVSTKWAARALVRTFQ--IENPDVRFFE  176 (235)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCCTTCHHHHHHHHHHHHHHHHHH--HHCTTSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccCCCcchHHHHHHHHHHHHHHHh--hcCCCeEEEE
Confidence            999999999999998                5789999999999999999999999999999999994  4466999999


Q ss_pred             EecCcccCcccchhcC
Q 042200          141 IAHIVSATPFFCNAMG  156 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~  156 (181)
                      |+||+++|++......
T Consensus       177 v~PG~v~T~~~~~~~~  192 (235)
T 3l77_A          177 LRPGAVDTYFGGSKPG  192 (235)
T ss_dssp             EEECSBSSSTTTCCSC
T ss_pred             EeCCccccccccccCC
Confidence            9999999998766543

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=99.96  E-value=2.7e-29  Score=185.66  Aligned_cols=163  Identities=18%  Similarity=0.202  Sum_probs=128.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++++          .+..+.+|++|.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        35 l~~~G~~V~~~~r~~~~~~----------~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~~~  102 (247)
T 1uzm_A           35 LAADGHKVAVTHRGSGAPK----------GLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSAD--AFLMRMTE  102 (247)
T ss_dssp             HHHTTCEEEEEESSSCCCT----------TSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-------CCCH
T ss_pred             HHHCCCEEEEEeCChHHHH----------HhcCeeccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhhCCH
Confidence            6789999999999865322          122488999999999999998  678899999999998765  67788999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||..+..+.++...|+++|++++.|+++++.+++++||++|+|+
T Consensus       103 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  182 (247)
T 1uzm_A          103 EKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVVA  182 (247)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEE
Confidence            999999999998                 489999999999988899999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++....   .++..+.+....  |++|+++|+|
T Consensus       183 PG~v~t~~~~~~---~~~~~~~~~~~~--p~~~~~~~~d  216 (247)
T 1uzm_A          183 PGYIDTDMTRAL---DERIQQGALQFI--PAKRVGTPAE  216 (247)
T ss_dssp             ECSBCCHHHHHS---CHHHHHHHGGGC--TTCSCBCHHH
T ss_pred             eCCCcccchhhc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999986543   233333333334  7788888864

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=99.96  E-value=1.1e-28  Score=184.08  Aligned_cols=165  Identities=23%  Similarity=0.334  Sum_probs=139.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+.        .  .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.+.
T Consensus        28 l~~~G~~V~~~~r~~~~--------~--~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~~~~   95 (264)
T 2dtx_A           28 FVDEGSKVIDLSIHDPG--------E--AKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVNNAGIESY--GKIESMSM   95 (264)
T ss_dssp             HHHTTCEEEEEESSCCC--------S--CSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTSCH
T ss_pred             HHHCCCEEEEEecCccc--------C--CceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CCcccCCH
Confidence            67899999999998654        1  2678899999999999999998  778899999999998766  77888999


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .|+||++||.++..+.++...|+++|++++.|+++++.+++++ |++|+|+
T Consensus        96 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~-i~vn~v~  174 (264)
T 2dtx_A           96 GEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITKNASAYVTSKHAVIGLTKSIALDYAPL-LRCNAVC  174 (264)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHTTT-SEEEEEE
T ss_pred             HHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCCCchhHHHHHHHHHHHHHHHHHHhcCC-cEEEEEE
Confidence            999999999998                 3799999999999999999999999999999999999999988 9999999


Q ss_pred             cCcccCcccchhcC----CCh----HHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMG----IDK----KTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++.|++......    ..+    +..+.+....  |++|+++|+|
T Consensus       175 PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~p~d  219 (264)
T 2dtx_A          175 PATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEH--PMQRIGKPQE  219 (264)
T ss_dssp             ECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             eCCCcCcchhhhhhcccccCchhhHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999998655421    022    2333444444  7889988875

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=99.96  E-value=2.6e-28  Score=181.62  Aligned_cols=173  Identities=18%  Similarity=0.181  Sum_probs=141.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+...+..+++..  ..++.++.+|++|.++++++++.  .+++++|+||||||....  .++.+.
T Consensus        34 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~  111 (265)
T 1h5q_A           34 VAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV--KPATEL  111 (265)
T ss_dssp             HHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCC--SCGGGC
T ss_pred             HHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCCcCCC--CchhhC
Confidence            678999999999975544443333321  13789999999999999999998  678899999999998766  777888


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCcc-------chhhHhhHHHHHHHHHHHHHHhc
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEA-------LYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~-------~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      +.++|+..+++|+.                  .++||++||..+..+.+.       ...|+++|++++.|+++++.+++
T Consensus       112 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  191 (265)
T 1h5q_A          112 THEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWA  191 (265)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             CHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccccccccccccccccHHHHHHHHHHHHHHHHHHH
Confidence            99999999999987                  278999999888765542       67899999999999999999999


Q ss_pred             CCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          133 QYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||++++|+||++.|++....   .++..+.+....  |++|+.+|+|
T Consensus       192 ~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  235 (265)
T 1h5q_A          192 SAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI--PLNRFAQPEE  235 (265)
T ss_dssp             GGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC--TTSSCBCGGG
T ss_pred             hcCcEEEEEecCcccccccccc---chhHHHHHHhcC--cccCCCCHHH
Confidence            9999999999999999987654   334444444444  7789988875

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=99.96  E-value=1.2e-28  Score=183.57  Aligned_cols=171  Identities=23%  Similarity=0.286  Sum_probs=138.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc----
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL----   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~----   75 (181)
                      |+++|++|++++|+.+.+++..+++..  ++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.    
T Consensus        32 l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~~~  107 (265)
T 2o23_A           32 LVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVA--SKTYNLKK  107 (265)
T ss_dssp             HHHTTCEEEEEECTTSSHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCSEETTT
T ss_pred             HHHCCCEEEEEeCCcHhHHHHHHHhCC--ceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEEEECCccCCC--Cccccccc
Confidence            678999999999998888777777754  789999999999999999998  677899999999998755  4333    


Q ss_pred             --cCCHHHHHHhhheeec---------------c--------eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHH
Q 042200           76 --DTDNEKVKRVMIMVVF---------------L--------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        76 --~~~~~~~~~~~~~n~~---------------~--------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                        +.+.++|+..+++|+.               .        ++||++||..+..+.++...|+++|++++.|+++++.+
T Consensus       108 ~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e  187 (265)
T 2o23_A          108 GQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARD  187 (265)
T ss_dssp             TEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhhcCCCCCCchhHHHHHHHHHHHHHHHHH
Confidence              3788999999999987               1        68999999999999899999999999999999999999


Q ss_pred             hcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccc-ccccccCC
Q 042200          131 LGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      ++++||++|+|+||++.|++.....+   +..+.+....  |+ +|+.+|+|
T Consensus       188 ~~~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~d  234 (265)
T 2o23_A          188 LAPIGIRVMTIAPGLFGTPLLTSLPE---KVCNFLASQV--PFPSRLGDPAE  234 (265)
T ss_dssp             HGGGTEEEEEEEECCBCCC-------------CHHHHTC--SSSCSCBCHHH
T ss_pred             HhhcCcEEEEEEeccccCccccccCH---HHHHHHHHcC--CCcCCCCCHHH
Confidence            99999999999999999998765422   2222333333  66 78887764

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=99.96  E-value=3.9e-28  Score=179.07  Aligned_cols=173  Identities=18%  Similarity=0.203  Sum_probs=144.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.++++...+++..  ..++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~--~~~~~~  104 (248)
T 2pnf_A           27 LASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGIDILVNNAGITRD--KLFLRM  104 (248)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCSEEEECCCCCCC--CCGGGC
T ss_pred             HHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CccccC
Confidence            678999999999998887776655422  13688999999999999999998  677899999999998766  677788


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.++++++.+++++||++++
T Consensus       105 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~  184 (248)
T 2pnf_A          105 SLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGNVGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNA  184 (248)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999987                 3799999999888888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||.+.|++....   .+...+.+....  |++++.+|+|
T Consensus       185 v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  220 (248)
T 2pnf_A          185 VAPGFIETDMTAVL---SEEIKQKYKEQI--PLGRFGSPEE  220 (248)
T ss_dssp             EEECSBCCGGGGGS---CHHHHHHHHHTC--TTSSCBCHHH
T ss_pred             EEeceecCchhhhc---cHHHHHHHHhcC--CCCCccCHHH
Confidence            99999999987543   223333333333  6677777754

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=99.96  E-value=5.7e-28  Score=177.93  Aligned_cols=170  Identities=20%  Similarity=0.213  Sum_probs=143.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+++++..+++.   .+.++.+|++|.++++++++  .++++|+||||||....  .++.+.+.+.
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~Ag~~~~--~~~~~~~~~~   99 (244)
T 3d3w_A           27 LHATGARVVAVSRTQADLDSLVRECP---GIEPVCVDLGDWEATERALG--SVGPVDLLVNNAAVALL--QPFLEVTKEA   99 (244)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT--TCCCCCEEEECCCCCCC--BCGGGCCHHH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHcC---CCCEEEEeCCCHHHHHHHHH--HcCCCCEEEECCccCCC--cchhhCCHHH
Confidence            67899999999999988887766654   35677999999999999988  56789999999998765  7778889999


Q ss_pred             HHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           82 VKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        82 ~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      |+..+++|+.                  .++||++||..+..+.++...|+++|++++.|+++++.+++++||++++|+|
T Consensus       100 ~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~P  179 (244)
T 3d3w_A          100 FDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNP  179 (244)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccCCCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEe
Confidence            9999999998                  2689999999999888899999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |.+.|++...... .+...+.+....  |++++.+|+|
T Consensus       180 g~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  214 (244)
T 3d3w_A          180 TVVMTSMGQATWS-DPHKAKTMLNRI--PLGKFAEVEH  214 (244)
T ss_dssp             CCBTTTTHHHHSC-STTHHHHHHHTC--TTCSCBCHHH
T ss_pred             ccccccchhhhcc-ChHHHHHHHhhC--CCCCCcCHHH
Confidence            9999998765432 233444555555  7788888764

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=99.96  E-value=3.2e-28  Score=180.42  Aligned_cols=173  Identities=18%  Similarity=0.186  Sum_probs=144.8

Q ss_pred             cccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccc-cCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGI-ISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~-~~~~~~~~~~   76 (181)
                      |+++|++|++++|+ .+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||. ...  .++.+
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~Ag~~~~~--~~~~~  104 (258)
T 3afn_B           27 FARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGGIDVLINNAGGLVGR--KPLPE  104 (258)
T ss_dssp             HHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSCSEEEECCCCCCCC--CCGGG
T ss_pred             HHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCcCCc--Ccccc
Confidence            67899999999998 77776666555322 4789999999999999999998  677899999999997 444  67778


Q ss_pred             CCHHHHHHhhheeec----------------c------eeEEEeccccccc-cCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           77 TDNEKVKRVMIMVVF----------------L------GVLLFTANLATET-IGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~------~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      .+.++|+..+++|+.                .      ++||++||..+.. +.++...|+++|++++.+++.++.++++
T Consensus       105 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~  184 (258)
T 3afn_B          105 IDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAGHTGGGPGAGLYGAAKAFLHNVHKNWVDFHTK  184 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             CCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            899999999999987                2      8999999998887 7888999999999999999999999999


Q ss_pred             CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++++|+||.+.|++....   .++..+.+....  |++++.+|+|
T Consensus       185 ~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  227 (258)
T 3afn_B          185 DGVRFNIVSPGTVDTAFHADK---TQDVRDRISNGI--PMGRFGTAEE  227 (258)
T ss_dssp             GTEEEEEEEECSBSSGGGTTC---CHHHHHHHHTTC--TTCSCBCGGG
T ss_pred             cCeEEEEEeCCCccccccccc---CHHHHHHHhccC--CCCcCCCHHH
Confidence            999999999999999986543   334444444444  7788888875

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=99.96  E-value=2.8e-28  Score=186.44  Aligned_cols=151  Identities=21%  Similarity=0.265  Sum_probs=132.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++..+++...   .++.++.+|+++.+++.++++.  .+++++|+||||||....  .++.
T Consensus        27 ~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~--~~~~  104 (319)
T 3ioy_A           27 QLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPVSILCNNAGVNLF--QPIE  104 (319)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCEEEEEECCCCCCC--CCGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCC--CCcc
Confidence            37889999999999999888887766432   2799999999999999999998  778899999999998776  7888


Q ss_pred             cCCHHHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           76 DTDNEKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      +.+.++|+..+++|+.                       .|+||++||.++..+.+.+..|++||+++++|+++++.++.
T Consensus       105 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~~~~~~~~~~Y~aSKaal~~~~~~la~e~~  184 (319)
T 3ioy_A          105 ESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAAFLAAGSPGIYNTTKFAVRGLSESLHYSLL  184 (319)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGGTCCCSSSHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccccccCCCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            9999999999999998                       14699999999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCcccCcccch
Q 042200          133 QYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ++||+|++|+||+|.|++...
T Consensus       185 ~~gi~v~~v~PG~v~T~~~~~  205 (319)
T 3ioy_A          185 KYEIGVSVLCPGLVKSYIYAS  205 (319)
T ss_dssp             GGTCEEEEECCCCBC------
T ss_pred             hcCCEEEEEEcCeEccCcccc
Confidence            999999999999999998754

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=99.96  E-value=3.6e-28  Score=178.93  Aligned_cols=174  Identities=16%  Similarity=0.175  Sum_probs=144.2

Q ss_pred             CcccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEE-EeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISY-VCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~-~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|+++ +|+.+++++..+++... .++.. +.+|+++.+++++++++  .+++++|+||||||....  .++.
T Consensus        20 ~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~li~~Ag~~~~--~~~~   97 (245)
T 2ph3_A           20 RLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGLDTLVNNAGITRD--TLLV   97 (245)
T ss_dssp             HHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCCCEEEECCCCCCC--BCGG
T ss_pred             HHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CCcc
Confidence            367899999998 89888877766655322 35666 99999999999999998  667899999999998765  6778


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.++++++.++.++||++
T Consensus        98 ~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v  177 (245)
T 2ph3_A           98 RMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGNPGQANYVASKAGLIGFTRAVAKEYAQRGITV  177 (245)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCSSBHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCCCCCcchHHHHHHHHHHHHHHHHHHHHcCeEE
Confidence            8899999999999987                 38999999999888889999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+||.+.|++....   .++..+.+....  |++++.+|+|
T Consensus       178 ~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  215 (245)
T 2ph3_A          178 NAVAPGFIETEMTERL---PQEVKEAYLKQI--PAGRFGRPEE  215 (245)
T ss_dssp             EEEEECSBCCHHHHTS---CHHHHHHHHHTC--TTCSCBCHHH
T ss_pred             EEEEEEeecCcchhhc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999986543   234444444444  6677777754

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=99.95  E-value=3e-28  Score=177.45  Aligned_cols=154  Identities=19%  Similarity=0.225  Sum_probs=127.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+                   +|++|.++++++++  +++++|+||||||..... .++.+.+.++
T Consensus        26 l~~~G~~V~~~~r~~~-------------------~D~~~~~~v~~~~~--~~g~id~lv~nAg~~~~~-~~~~~~~~~~   83 (223)
T 3uce_A           26 LESEHTIVHVASRQTG-------------------LDISDEKSVYHYFE--TIGAFDHLIVTAGSYAPA-GKVVDVEVTQ   83 (223)
T ss_dssp             HCSTTEEEEEESGGGT-------------------CCTTCHHHHHHHHH--HHCSEEEEEECCCCCCCC-SCTTTSCHHH
T ss_pred             HHHCCCEEEEecCCcc-------------------cCCCCHHHHHHHHH--HhCCCCEEEECCCCCCCC-CCcccCCHHH
Confidence            5566666666666543                   79999999999998  467899999999987332 7788899999


Q ss_pred             HHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcc
Q 042200           82 VKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS  146 (181)
Q Consensus        82 ~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v  146 (181)
                      |+..+++|+.               .|+||++||..+..+.++...|+++|+++++|+++|+.++++  |+||+|+||++
T Consensus        84 ~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~--i~vn~v~PG~v  161 (223)
T 3uce_A           84 AKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVANTYVKAAINAAIEATTKVLAKELAP--IRVNAISPGLT  161 (223)
T ss_dssp             HHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTT--SEEEEEEECSB
T ss_pred             HHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHhhcC--cEEEEEEeCCC
Confidence            9999999998               579999999999999999999999999999999999999987  99999999999


Q ss_pred             cCcccchhcCCCh-HHHHHHHHHhhcccccccccCC
Q 042200          147 ATPFFCNAMGIDK-KTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       147 ~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .|++.....+... +..+.+....  |++|+++|+|
T Consensus       162 ~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  195 (223)
T 3uce_A          162 KTEAYKGMNADDRDAMYQRTQSHL--PVGKVGEASD  195 (223)
T ss_dssp             CSGGGTTSCHHHHHHHHHHHHHHS--TTCSCBCHHH
T ss_pred             cchhhhhcchhhHHHHHHHHhhcC--CCCCccCHHH
Confidence            9998776533211 2233344445  8899999875

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=99.95  E-value=1.1e-28  Score=182.05  Aligned_cols=173  Identities=19%  Similarity=0.203  Sum_probs=122.0

Q ss_pred             cccCCCEEEEe-ecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIA-DVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~-~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|+++ .|+.+.+++..+++... .++.++.+|++|.+++++++++  .+++++|+||||||....  .++.+.
T Consensus        25 l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~--~~~~~~  102 (247)
T 2hq1_A           25 LGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRIDILVNNAGITRD--TLMLKM  102 (247)
T ss_dssp             HHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEECC-------------
T ss_pred             HHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCC--CccccC
Confidence            67899999998 66766666655554322 4789999999999999999998  667899999999998765  667777


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.+++++||++|+
T Consensus       103 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  182 (247)
T 2hq1_A          103 SEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIGNAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNA  182 (247)
T ss_dssp             ----CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC---------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEE
Confidence            88889999999987                 3799999999888888889999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||.+.|++....   .++..+.+....  |++++.+|+|
T Consensus       183 v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~d  218 (247)
T 2hq1_A          183 VAPGIIKTDMTDVL---PDKVKEMYLNNI--PLKRFGTPEE  218 (247)
T ss_dssp             EEECSBCCHHHHTS---CHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             EEEEEEeccchhhc---chHHHHHHHhhC--CCCCCCCHHH
Confidence            99999999986543   223333333333  6677777754

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=99.95  E-value=4.1e-28  Score=185.85  Aligned_cols=148  Identities=15%  Similarity=0.150  Sum_probs=124.3

Q ss_pred             CcccCCCEEEEeecc-----hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCC
Q 042200            1 VFIQHRAKVIIADVQ-----DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDR   72 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-----~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~   72 (181)
                      +|+++|++|++++|+     .+.++...+.+... .++.++.+|++|.+++.+++++  .++|++|+||||||+...  .
T Consensus        24 ~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~--~  101 (324)
T 3u9l_A           24 ALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGEDGRIDVLIHNAGHMVF--G  101 (324)
T ss_dssp             HHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECCCCCBC--S
T ss_pred             HHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--C
Confidence            378899999988775     44555544433221 3799999999999999999998  778999999999998776  7


Q ss_pred             CcccCCHHHHHHhhheeec-----------------ceeEEEecccccccc-CccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           73 TTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETI-GEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~-~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      ++.+.+.++|+..+++|+.                 .|+||++||.++..+ .+....|++||+++++|+++++.|++++
T Consensus       102 ~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~~~~~~~~~~~Y~asKaa~~~~~~~la~el~~~  181 (324)
T 3u9l_A          102 PAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSSAGGTPPYLAPYFAAKAAMDAIAVQYARELSRW  181 (324)
T ss_dssp             CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             ChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchhccCCCCcchhHHHHHHHHHHHHHHHHHHhhhh
Confidence            8889999999999999998                 589999999988854 4667889999999999999999999999


Q ss_pred             CeEEEEEecCcccCcc
Q 042200          135 DIRVNSIAHIVSATPF  150 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~  150 (181)
                      ||+|++|+||++.|++
T Consensus       182 gI~v~~v~PG~v~t~~  197 (324)
T 3u9l_A          182 GIETSIIVPGAFTSGT  197 (324)
T ss_dssp             TEEEEEEEECCC----
T ss_pred             CcEEEEEECCccccCc
Confidence            9999999999999765

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=99.95  E-value=2.8e-28  Score=181.45  Aligned_cols=173  Identities=17%  Similarity=0.208  Sum_probs=138.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--------CceEEEeeecCChhHHHHHHHh--cccCCc-cEEEEcccccCCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--------ELISYVCCNVTIDSDVKNVFDF--TKFGKL-DIMFNNAGIISNM   70 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~--~~~~~i-d~vi~~ag~~~~~   70 (181)
                      |+++|++|++++|+.+.+++..+++...        .++.++.+|++|.++++++++.  .+++++ |+||||||.... 
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~-  105 (264)
T 2pd6_A           27 LAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQACFSRPPSVVVSCAGITQD-  105 (264)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHHHHHSSCCSEEEECCCCCCC-
T ss_pred             HHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHHHHhCCCCeEEEECCCcCCC-
Confidence            6789999999999998888777666421        3688999999999999999988  677888 999999998766 


Q ss_pred             CCCcccCCHHHHHHhhheeec----------------c--eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF----------------L--GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~----------------~--~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                       ..+.+.+.++|+..+++|+.                +  ++||++||..+..+.++...|+++|++++.|++.++.+++
T Consensus       106 -~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~  184 (264)
T 2pd6_A          106 -EFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELG  184 (264)
T ss_dssp             -BCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHCCTTBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             -cchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccCCCCChhhHHHHHHHHHHHHHHHHHhh
Confidence             77788899999999999988                2  6899999999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          133 QYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||++++|+||.+.|++.....+   +..+.+....  |++++++|+|
T Consensus       185 ~~gi~v~~v~Pg~v~t~~~~~~~~---~~~~~~~~~~--~~~~~~~~~d  228 (264)
T 2pd6_A          185 RHGIRCNSVLPGFIATPMTQKVPQ---KVVDKITEMI--PMGHLGDPED  228 (264)
T ss_dssp             GGTEEEEEEEECSBCSCC-------------CTGGGC--TTCSCBCHHH
T ss_pred             hcCeEEEEEeeecccccchhhcCH---HHHHHHHHhC--CCCCCCCHHH
Confidence            999999999999999998654321   2222222223  5666666653

>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A

Probab=99.95  E-value=5e-28  Score=192.73  Aligned_cols=169  Identities=19%  Similarity=0.196  Sum_probs=135.9

Q ss_pred             cccCCCEEEEeecch--HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCC-ccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQD--DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGK-LDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~-id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.  +.+++..+++    .+.++.||++|.+++++++++  .++++ +|+||||||....  ..+.+
T Consensus       233 La~~Ga~Vvl~~r~~~~~~l~~~~~~~----~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~lV~nAGv~~~--~~~~~  306 (454)
T 3u0b_A          233 FARDGATVVAIDVDGAAEDLKRVADKV----GGTALTLDVTADDAVDKITAHVTEHHGGKVDILVNNAGITRD--KLLAN  306 (454)
T ss_dssp             HHHTTCEEEEEECGGGHHHHHHHHHHH----TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSEEEECCCCCCC--CCGGG
T ss_pred             HHHCCCEEEEEeCCccHHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHHcCCCceEEEECCcccCC--Ccccc
Confidence            678999999999964  4444444444    356899999999999999998  66765 9999999999877  88889


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      ++.++|+.++++|+.                 .++||++||.++..+.+++..|+++|+++++|+++++.+++++||++|
T Consensus       307 ~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~~g~~~YaasKaal~~l~~~la~e~~~~gI~vn  386 (454)
T 3u0b_A          307 MDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGNRGQTNYATTKAGMIGLAEALAPVLADKGITIN  386 (454)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            999999999999998                 479999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|+|.........+   ......  |++|.++|+|
T Consensus       387 ~v~PG~v~T~~~~~~~~~~~~---~~~~~~--~l~r~g~ped  423 (454)
T 3u0b_A          387 AVAPGFIETKMTEAIPLATRE---VGRRLN--SLFQGGQPVD  423 (454)
T ss_dssp             EEEECSBCC----------CH---HHHHSB--TTSSCBCHHH
T ss_pred             EEEcCcccChhhhhcchhhHH---HHHhhc--cccCCCCHHH
Confidence            999999999997765432211   112222  7788888864

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=99.95  E-value=1.2e-27  Score=181.35  Aligned_cols=175  Identities=21%  Similarity=0.156  Sum_probs=142.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.+.+++..+++..  ..++.++.+|+++.++++++++.  .+++++|+||||||....  .++.+.
T Consensus        46 L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~--~~~~~~  123 (302)
T 1w6u_A           46 LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFI--SPTERL  123 (302)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCC--SCGGGC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CccccC
Confidence            678999999999998888777666532  13689999999999999999998  678899999999998765  677788


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|+..+++|+.                  .++||++||..+..+.++...|+++|++++.|+++++.+++++||+++
T Consensus       124 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~  203 (302)
T 1w6u_A          124 SPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFN  203 (302)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccCCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEE
Confidence            99999999999987                  279999999999988899999999999999999999999999999999


Q ss_pred             EEecCcccCc-ccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATP-FFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||.+.|+ +.....+ .....+.+....  |++|+++|+|
T Consensus       204 ~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~--p~~~~~~~~d  243 (302)
T 1w6u_A          204 VIQPGPIKTKGAFSRLDP-TGTFEKEMIGRI--PCGRLGTVEE  243 (302)
T ss_dssp             EEEECCBCC------CCT-TSHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEeeccCCCcchhhhccc-chhhHHHHHhcC--CcCCCCCHHH
Confidence            9999999998 5444322 222223333344  7788888764

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=99.95  E-value=4.5e-27  Score=173.05  Aligned_cols=170  Identities=22%  Similarity=0.234  Sum_probs=143.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+.+++..+++.   .+.++.+|+++.++++++++  .++++|+||||||....  .++.+.+.++
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~--~~~~id~vi~~Ag~~~~--~~~~~~~~~~   99 (244)
T 1cyd_A           27 LHASGAKVVAVTRTNSDLVSLAKECP---GIEPVCVDLGDWDATEKALG--GIGPVDLLVNNAALVIM--QPFLEVTKEA   99 (244)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHT--TCCCCSEEEECCCCCCC--BCGGGCCHHH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHhcc---CCCcEEecCCCHHHHHHHHH--HcCCCCEEEECCcccCC--CCcccCCHHH
Confidence            67899999999999888877766553   35677999999999999988  56789999999998766  7778889999


Q ss_pred             HHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           82 VKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        82 ~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      |+..+++|+.                  .++||++||..+..+.++...|+++|++++.|+++++.+++++||++++|+|
T Consensus       100 ~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~p  179 (244)
T 1cyd_A          100 FDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNP  179 (244)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCCCCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEec
Confidence            9999999987                  2689999999999888889999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |.+.|++...... .+...+.+....  |++++.+|+|
T Consensus       180 g~v~t~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~d  214 (244)
T 1cyd_A          180 TVVLTDMGKKVSA-DPEFARKLKERH--PLRKFAEVED  214 (244)
T ss_dssp             CCBTTHHHHHHTC-CHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             CcccCcccccccc-CHHHHHHHHhcC--CccCCCCHHH
Confidence            9999998654322 344545555555  7788877764

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=99.95  E-value=1e-27  Score=176.82  Aligned_cols=168  Identities=11%  Similarity=0.069  Sum_probs=136.4

Q ss_pred             cccCCCEEEEe-e--cchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC-CCCcc
Q 042200            2 FIQHRAKVIIA-D--VQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM-DRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~-~--r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~-~~~~~   75 (181)
                      |+++|++|+++ +  |+.+.+++..+++ .  .     +|+.|.+++++++++  .+++++|+||||||..... ..++.
T Consensus        21 l~~~G~~V~~~~~~~r~~~~~~~~~~~~-~--~-----~~~~~~~~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~   92 (244)
T 1zmo_A           21 LTQDGYTVVCHDASFADAAERQRFESEN-P--G-----TIALAEQKPERLVDATLQHGEAIDTIVSNDYIPRPMNRLPLE   92 (244)
T ss_dssp             HHHTTCEEEECCGGGGSHHHHHHHHHHS-T--T-----EEECCCCCGGGHHHHHGGGSSCEEEEEECCCCCTTGGGCCST
T ss_pred             HHHCCCEEEEecCCcCCHHHHHHHHHHh-C--C-----CcccCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCCcc
Confidence            67899999999 6  9998888877766 2  1     234477777778777  6788999999999976420 03566


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+|
T Consensus        93 ~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v  172 (244)
T 1zmo_A           93 GTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLAYNPLYGPARAATVALVESAAKTLSRDGILL  172 (244)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCTTCTTHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCCCchHHHHHHHHHHHHHHHHHHHHhhcCcEE
Confidence            7889999999999998                 48999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCccc---chhcCCChHHHHHHHH-HhhcccccccccCC
Q 042200          139 NSIAHIVSATPFF---CNAMGIDKKTFKELLY-ASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|++.   ....+  ++..+.+.. ..  |++|+++|+|
T Consensus       173 ~~v~PG~v~T~~~~~~~~~~~--~~~~~~~~~~~~--p~~r~~~pe~  215 (244)
T 1zmo_A          173 YAIGPNFFNNPTYFPTSDWEN--NPELRERVDRDV--PLGRLGRPDE  215 (244)
T ss_dssp             EEEEESSBCBTTTBCHHHHHH--CHHHHHHHHHHC--TTCSCBCHHH
T ss_pred             EEEeeCCCcCCcccccccccc--hHHHHHHHhcCC--CCCCCcCHHH
Confidence            9999999999987   54432  233344444 45  7899999875

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=99.95  E-value=2.1e-28  Score=181.51  Aligned_cols=166  Identities=13%  Similarity=0.135  Sum_probs=133.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC-CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEccccc-CCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGII-SNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~-~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.++++...+ +.. ..++..+     |.+++++++++  .+++++|+||||||.. ..  .++.+.
T Consensus        21 l~~~G~~V~~~~r~~~~~~~~~~-l~~~~~~~~~~-----d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~--~~~~~~   92 (254)
T 1zmt_A           21 LSEAGHTVACHDESFKQKDELEA-FAETYPQLKPM-----SEQEPAELIEAVTSAYGQVDVLVSNDIFAPEF--QPIDKY   92 (254)
T ss_dssp             HHHTTCEEEECCGGGGSHHHHHH-HHHHCTTSEEC-----CCCSHHHHHHHHHHHHSCCCEEEEECCCCCCC--CCGGGS
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHH-HHhcCCcEEEE-----CHHHHHHHHHHHHHHhCCCCEEEECCCcCCCC--CChhhC
Confidence            67899999999999876665433 321 1233333     66777777777  5678999999999987 54  778889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||+||+
T Consensus        93 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~  172 (254)
T 1zmt_A           93 AVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFA  172 (254)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEE
Confidence            99999999999998                 4799999999999999999999999999999999999999999999999


Q ss_pred             EecCcc---------cCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVS---------ATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v---------~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+         +|++...    .++..+.+....  |++|+++|+|
T Consensus       173 v~PG~v~~~~~~~~~~T~~~~~----~~~~~~~~~~~~--p~~~~~~p~d  216 (254)
T 1zmt_A          173 IGPNYLHSEDSPYFYPTEPWKT----NPEHVAHVKKVT--ALQRLGTQKE  216 (254)
T ss_dssp             EEESSBCCBTCCSSCBHHHHTT----CHHHHHHHHHHS--SSSSCBCHHH
T ss_pred             EecCccccccccccCCCccccc----ChHHHHHHhccC--CCCCCcCHHH
Confidence            999999         7776432    234444444455  7899988875

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=8.9e-28  Score=182.23  Aligned_cols=175  Identities=16%  Similarity=0.147  Sum_probs=142.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC------CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS------DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      |+++|++|++++|+.+.+++..+++..      ..++.++.+|+++.++++++++.  .+++++|+||||||....  ..
T Consensus        38 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--~~  115 (303)
T 1yxm_A           38 LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL--SP  115 (303)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CC
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--Cc
Confidence            678999999999998888777666532      24789999999999999999998  677899999999997665  67


Q ss_pred             cccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           74 TLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.+.++|+..+++|+.                 .++||++||.. ..+.+....|+++|+++.+++++++.++.++||
T Consensus       116 ~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~-~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi  194 (303)
T 1yxm_A          116 AEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPT-KAGFPLAVHSGAARAGVYNLTKSLALEWACSGI  194 (303)
T ss_dssp             GGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCC-TTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTE
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeec-ccCCCcchhhHHHHHHHHHHHHHHHHHhcccCe
Confidence            778899999999999987                 47899999987 777888899999999999999999999999999


Q ss_pred             EEEEEecCcccCccc-chhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          137 RVNSIAHIVSATPFF-CNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++++|+||.+.|++. .......++..+......  |++|+++|+|
T Consensus       195 ~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~d  238 (303)
T 1yxm_A          195 RINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI--PAKRIGVPEE  238 (303)
T ss_dssp             EEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS--TTSSCBCTHH
T ss_pred             EEEEEecCCcccchhhhhccccchHHHHHHHhcC--cccCCCCHHH
Confidence            999999999999952 222111122223333333  6677777764

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=99.95  E-value=6.2e-27  Score=183.72  Aligned_cols=171  Identities=10%  Similarity=-0.011  Sum_probs=135.5

Q ss_pred             cccCCCEEEEeecch---------------HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcc
Q 042200            2 FIQHRAKVIIADVQD---------------DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNA   64 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~---------------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~a   64 (181)
                      |+++|++|++++|+.               +.+++..+...  .++..+.+|+++.+++++++++  .++|++|+|||||
T Consensus        82 la~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNA  159 (418)
T 4eue_A           82 FGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKG--LVAKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSL  159 (418)
T ss_dssp             HSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTT--CCEEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECC
T ss_pred             HHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcC--CcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence            567899999999863               22333333333  3788999999999999999999  7789999999999


Q ss_pred             ccc-------------CCCCCCc---------------------ccCCHHHHHHhhheeec------------------c
Q 042200           65 GII-------------SNMDRTT---------------------LDTDNEKVKRVMIMVVF------------------L   92 (181)
Q Consensus        65 g~~-------------~~~~~~~---------------------~~~~~~~~~~~~~~n~~------------------~   92 (181)
                      |..             ..  .++                     .+.+.++|+.++++|..                  +
T Consensus       160 G~~~r~~~~~g~~~~s~~--~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~g  237 (418)
T 4eue_A          160 AAPRRKDYKTGNVYTSRI--KTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDK  237 (418)
T ss_dssp             CCSEEECTTTCCEEECCC--CBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEE
T ss_pred             cccccccccccccccccc--cccccccccccccccccccccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCC
Confidence            974             11  222                     35688999999887643                  5


Q ss_pred             eeEEEeccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHh
Q 042200           93 GVLLFTANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYAS  169 (181)
Q Consensus        93 ~~iv~iss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~  169 (181)
                      |+||++||.++..+.|.+  ..|++||+++++|+++|+.|+++ +|||||+|+||.+.|++....+. .+.....+.  .
T Consensus       238 g~IV~iSSi~~~~~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~~s~~ip~-~p~y~~~~~--~  314 (418)
T 4eue_A          238 ATTIAYSYIGSPRTYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTKASAYIPT-FPLYAAILY--K  314 (418)
T ss_dssp             EEEEEEECCCCGGGTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCHHHHTSTT-HHHHHHHHH--H
T ss_pred             cEEEEEeCchhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcChhhhcCCC-CcHHHHHHH--H
Confidence            799999999999998888  99999999999999999999999 99999999999999999877643 222222222  2


Q ss_pred             hcccccccccCC
Q 042200          170 ANLKGVVLKAAD  181 (181)
Q Consensus       170 ~~~~~~~~~~~e  181 (181)
                        +|+|.++|||
T Consensus       315 --~mk~~G~~E~  324 (418)
T 4eue_A          315 --VMKEKNIHEN  324 (418)
T ss_dssp             --HHHHTTCCCC
T ss_pred             --HHhhcCChHH
Confidence              6788898875

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=99.95  E-value=1.5e-27  Score=178.99  Aligned_cols=173  Identities=18%  Similarity=0.178  Sum_probs=139.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC-CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc-cC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL-DT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~-~~   77 (181)
                      |+++|++|++++|+.+..++..+.+.. ..++.++.+|++|.++++++++.  .+++++|+||||||..... .++. +.
T Consensus        54 L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~~-~~~~~~~  132 (279)
T 3ctm_A           54 YAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTIDVFVANAGVTWTQ-GPEIDVD  132 (279)
T ss_dssp             HHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCCSEEEECGGGSTTC---CCCSS
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCCCEEEECCcccccC-CcccccC
Confidence            678899999999987655544433321 13688999999999999999988  6778999999999986431 3444 67


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEecccccccc--CccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETI--GEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~--~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.++|+..+++|+.                 .++||++||..+..+  .++...|+++|++++.|+++++.+++++| ++
T Consensus       133 ~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v  211 (279)
T 3ctm_A          133 NYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKIVNIPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RV  211 (279)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSCC---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhccCCCCCCcccHHHHHHHHHHHHHHHHHHhcccC-CE
Confidence            78899999999987                 479999999998877  77889999999999999999999999999 99


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||++.|++....   .++..+.+....  |++|+.+|+|
T Consensus       212 ~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--p~~~~~~~~d  249 (279)
T 3ctm_A          212 NTISPGYIDTDITDFA---SKDMKAKWWQLT--PLGREGLTQE  249 (279)
T ss_dssp             EEEEECSBSSTTTSSC---CHHHHHHHHHHS--TTCSCBCGGG
T ss_pred             EEEeccCCcccccccc---ChHHHHHHHHhC--CccCCcCHHH
Confidence            9999999999987432   344455555555  7899999876

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=99.95  E-value=7.4e-27  Score=171.95  Aligned_cols=151  Identities=17%  Similarity=0.276  Sum_probs=135.3

Q ss_pred             cccCCC-------EEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC
Q 042200            2 FIQHRA-------KVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         2 l~~~G~-------~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~   71 (181)
                      |+++|+       +|++++|+.+.++....++... .++.++.+|+++.+++++++++  .+++++|+||||||....  
T Consensus        22 l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~--   99 (244)
T 2bd0_A           22 FARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF--   99 (244)
T ss_dssp             HHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCC--
T ss_pred             HHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHHHhCCCCCEEEEcCCcCCc--
Confidence            677888       9999999988888777666432 4789999999999999999998  677899999999998766  


Q ss_pred             CCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           72 RTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      .++.+.+.++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.+++++
T Consensus       100 ~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  179 (244)
T 2bd0_A          100 GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC  179 (244)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchhcCCCCCCchhHHHHHHHHHHHHHHHHHhhcc
Confidence            77888899999999999988                 4899999999999999999999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchh
Q 042200          135 DIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ||++++|+||++.|++....
T Consensus       180 gi~v~~v~Pg~v~t~~~~~~  199 (244)
T 2bd0_A          180 NVRITDVQPGAVYTPMWGKV  199 (244)
T ss_dssp             TEEEEEEEECCBCSTTTCCC
T ss_pred             CcEEEEEECCCccchhhhhc
Confidence            99999999999999987653

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=99.95  E-value=5.9e-27  Score=175.90  Aligned_cols=151  Identities=24%  Similarity=0.267  Sum_probs=131.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+++++..+++...   .++.++.+|++|.+++++++++  .+++++|+||||||....  ..+.+
T Consensus        52 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~vi~~Ag~~~~--~~~~~  129 (279)
T 1xg5_A           52 LVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP--DTLLS  129 (279)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCC--CCTTT
T ss_pred             HHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCCCCEEEECCCCCCC--CCccc
Confidence            6789999999999988887766655321   3688899999999999999988  667899999999998766  67778


Q ss_pred             CCHHHHHHhhheeec----------------c---eeEEEecccccc--ccCccchhhHhhHHHHHHHHHHHHHHhc--C
Q 042200           77 TDNEKVKRVMIMVVF----------------L---GVLLFTANLATE--TIGEALYDYLMSKYAVLGLMKNLCVELG--Q  133 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~---~~iv~iss~~~~--~~~~~~~~y~~sK~a~~~l~~~la~~~~--~  133 (181)
                      .+.++|+..+++|+.                .   ++||++||..+.  .+.++...|+++|++++.|++.++.+++  +
T Consensus       130 ~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~  209 (279)
T 1xg5_A          130 GSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQ  209 (279)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhcccCCCCCCchhHHHHHHHHHHHHHHHHHHhhcC
Confidence            899999999999997                2   799999999887  5677888999999999999999999998  8


Q ss_pred             CCeEEEEEecCcccCcccchh
Q 042200          134 YDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      +||++++|+||++.|++....
T Consensus       210 ~~i~v~~v~Pg~v~t~~~~~~  230 (279)
T 1xg5_A          210 THIRATCISPGVVETQFAFKL  230 (279)
T ss_dssp             CCCEEEEEEESCBCSSHHHHH
T ss_pred             CCeEEEEEecCcccchhhhhh
Confidence            899999999999999985443

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=99.95  E-value=5.4e-27  Score=175.30  Aligned_cols=176  Identities=22%  Similarity=0.222  Sum_probs=143.9

Q ss_pred             cccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++| +.+.+++..+++... .++.++.+|++|.+++.+++++  .+++++|+||||||....  ..+.+.
T Consensus        41 l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~--~~~~~~  118 (274)
T 1ja9_A           41 LGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW--CDELEV  118 (274)
T ss_dssp             HHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCC--CCGGGC
T ss_pred             HHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--cccccC
Confidence            6789999999999 777777666655322 4788999999999999999988  677899999999998765  677788


Q ss_pred             CHHHHHHhhheeec---------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           78 DNEKVKRVMIMVVF---------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        78 ~~~~~~~~~~~n~~---------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      +.++|+..+++|+.               +++||++||..+. .+.++...|+++|++++.|++.++.+++++||+++++
T Consensus       119 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v  198 (274)
T 1ja9_A          119 TQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCI  198 (274)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHhccCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEE
Confidence            99999999999987               3699999999888 7788899999999999999999999999999999999


Q ss_pred             ecCcccCcccchhc---------CCC-hHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAM---------GID-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||.+.|++.....         ... ++..+.+....  |++++.+|+|
T Consensus       199 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d  246 (274)
T 1ja9_A          199 APGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN--PLKRIGYPAD  246 (274)
T ss_dssp             EECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             eeCcccccchhcccccccccccccCchHHHHHHHHhcC--CCCCccCHHH
Confidence            99999999865311         112 33333333344  7788887764

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=99.95  E-value=8.7e-28  Score=181.49  Aligned_cols=146  Identities=17%  Similarity=0.089  Sum_probs=124.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.+|++|.+++++++++  .+++|+||||||....    ..+.+.+
T Consensus        35 ~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dl~d~~~v~~~~~~--~~~iD~lv~nAg~~~~----~~~~~~~  106 (291)
T 3rd5_A           35 ELARRGATVIMAVRDTRKGEAAARTMAG--QVEVRELDLQDLSSVRRFADG--VSGADVLINNAGIMAV----PYALTVD  106 (291)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHTTSSS--EEEEEECCTTCHHHHHHHHHT--CCCEEEEEECCCCCSC----CCCBCTT
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhcC--CeeEEEcCCCCHHHHHHHHHh--cCCCCEEEECCcCCCC----cccCCHH
Confidence            3788999999999999999988887754  899999999999999999984  4689999999998643    2456778


Q ss_pred             HHHHhhheeec-------------ceeEEEecccccccc-------------CccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           81 KVKRVMIMVVF-------------LGVLLFTANLATETI-------------GEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        81 ~~~~~~~~n~~-------------~~~iv~iss~~~~~~-------------~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +|+..+++|+.             .++||++||.++..+             .++...|++||++++.|++.++.+++++
T Consensus       107 ~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~  186 (291)
T 3rd5_A          107 GFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWRSRRYSPWLAYSQSKLANLLFTSELQRRLTAA  186 (291)
T ss_dssp             SCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCSSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCcccccccccCCCCcchHHHHHHHHHHHHHHHHHHHhhC
Confidence            88999999988             568999999988755             3566789999999999999999999987


Q ss_pred             C--eEEEEEecCcccCcccchh
Q 042200          135 D--IRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       135 ~--i~v~~i~Pg~v~t~~~~~~  154 (181)
                      |  |++|+|+||++.|++.+..
T Consensus       187 g~~i~v~~v~PG~v~T~~~~~~  208 (291)
T 3rd5_A          187 GSPLRALAAHPGYSHTNLQGAS  208 (291)
T ss_dssp             TCCCEEEEECCSGGGSCC----
T ss_pred             CCCEEEEEeeCCCCcccccccc
Confidence            7  9999999999999997765

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=99.94  E-value=1.7e-27  Score=178.37  Aligned_cols=149  Identities=18%  Similarity=0.284  Sum_probs=131.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.+.+++..+++... .++.++.+|++|.+++.+++++  .+++++|+||||||....  ..+.+.+
T Consensus        51 L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~--~~~~~~~  128 (272)
T 1yb1_A           51 FAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT--SDLFATQ  128 (272)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCC--CCCGGGH
T ss_pred             HHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCcEEEECCCcCCC--cchhhCC
Confidence            6789999999999988887776665332 4789999999999999999998  677899999999998766  6777788


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc---CCCeEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG---QYDIRV  138 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~---~~~i~v  138 (181)
                      .++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.|+++++.++.   +.||++
T Consensus       129 ~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v  208 (272)
T 1yb1_A          129 DPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKT  208 (272)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEE
T ss_pred             HHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCCCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEE
Confidence            8999999999988                 47999999999988888889999999999999999999996   679999


Q ss_pred             EEEecCcccCcccc
Q 042200          139 NSIAHIVSATPFFC  152 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~  152 (181)
                      ++|+||+++|++..
T Consensus       209 ~~v~Pg~v~t~~~~  222 (272)
T 1yb1_A          209 TCLCPNFVNTGFIK  222 (272)
T ss_dssp             EEEEETHHHHCSTT
T ss_pred             EEEeCCcccCCccc
Confidence            99999999999854

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=99.94  E-value=1.7e-26  Score=169.09  Aligned_cols=147  Identities=20%  Similarity=0.201  Sum_probs=125.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.+++++..+++.   ++.++.+|++|.++++++++.  ..++++|+||||||....  .++.+.+.
T Consensus        25 l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~~Ag~~~~--~~~~~~~~   99 (234)
T 2ehd_A           25 LHAKGYRVGLMARDEKRLQALAAELE---GALPLPGDVREEGDWARAVAAMEEAFGELSALVNNAGVGVM--KPVHELTL   99 (234)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHST---TCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--SCGGGCCH
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHhh---hceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCC--CCcccCCH
Confidence            67899999999999988887776664   578899999999999999988  667899999999998765  77888899


Q ss_pred             HHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      ++|+..+++|+.                 .++||++||..+..+.++...|+++|++++.++++++.+++++||++++|+
T Consensus       100 ~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~  179 (234)
T 2ehd_A          100 EEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNPFKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVL  179 (234)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCCCCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEE
Confidence            999999999987                 489999999999888888999999999999999999999999999999999


Q ss_pred             cCcccCcccch
Q 042200          143 HIVSATPFFCN  153 (181)
Q Consensus       143 Pg~v~t~~~~~  153 (181)
                      ||++.|++...
T Consensus       180 Pg~v~t~~~~~  190 (234)
T 2ehd_A          180 PGSVDTGFAGN  190 (234)
T ss_dssp             CC---------
T ss_pred             eCCCcCCcccc
Confidence            99999998654

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=99.94  E-value=1.1e-26  Score=176.41  Aligned_cols=162  Identities=16%  Similarity=0.146  Sum_probs=134.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCCh-hHHHHHHHh--cccCCccEEEEcccccCCC-----
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTID-SDVKNVFDF--TKFGKLDIMFNNAGIISNM-----   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~-~~i~~~~~~--~~~~~id~vi~~ag~~~~~-----   70 (181)
                      +|+++|++|++++|+.+++++..+++...  .++.++.+|+++. ++++++++.  .+++++|+||||||.....     
T Consensus        31 ~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~  110 (311)
T 3o26_A           31 QLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKLDILVNNAGVAGFSVDADR  110 (311)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHH
T ss_pred             HHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCCCEEEECCcccccccccch
Confidence            37889999999999999988888877543  4799999999998 999999988  6678999999999986420     


Q ss_pred             -----------------------CCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccC---
Q 042200           71 -----------------------DRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIG---  107 (181)
Q Consensus        71 -----------------------~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~---  107 (181)
                                             ...+.+.+.+.|+..+++|+.                 .++||++||.++..+.   
T Consensus       111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~  190 (311)
T 3o26_A          111 FKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSN  190 (311)
T ss_dssp             HHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCC
T ss_pred             hhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccc
Confidence                                   024456788999999999998                 4799999999887653   


Q ss_pred             ----------------------------------------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Q 042200          108 ----------------------------------------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSA  147 (181)
Q Consensus       108 ----------------------------------------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~  147 (181)
                                                              ++...|++||+++++|+++|+.++++  |+||+|+||+|.
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~--i~v~~v~PG~v~  268 (311)
T 3o26_A          191 ETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVLANKIPK--FQVNCVCPGLVK  268 (311)
T ss_dssp             HHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHHHHHCTT--SEEEEECCCSBC
T ss_pred             hhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHHHhhcCC--ceEEEecCCcee
Confidence                                                    35578999999999999999999974  999999999999


Q ss_pred             CcccchhcCCChHHHHH
Q 042200          148 TPFFCNAMGIDKKTFKE  164 (181)
Q Consensus       148 t~~~~~~~~~~~~~~~~  164 (181)
                      |++........++...+
T Consensus       269 T~~~~~~~~~~~~~~a~  285 (311)
T 3o26_A          269 TEMNYGIGNYTAEEGAE  285 (311)
T ss_dssp             SGGGTTCCSBCHHHHHH
T ss_pred             cCCcCCCCCCCHHHHHH
Confidence            99987765545544433

>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*

Probab=99.94  E-value=5e-27  Score=179.21  Aligned_cols=138  Identities=18%  Similarity=0.130  Sum_probs=111.9

Q ss_pred             hhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEecccccc
Q 042200           42 DSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATE  104 (181)
Q Consensus        42 ~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~  104 (181)
                      .+++++++++  .+++++|+||||||.......++.+.+.++|+..+++|+.               .|+||++||.++.
T Consensus       104 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~  183 (315)
T 2o2s_A          104 GYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAE  183 (315)
T ss_dssp             CCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGT
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEeccccc
Confidence            6688888888  6789999999999976411167788999999999999998               4899999999999


Q ss_pred             ccCccc-hhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhcCC-ChHH----HHHHHHHhhccccccc
Q 042200          105 TIGEAL-YDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAMGI-DKKT----FKELLYASANLKGVVL  177 (181)
Q Consensus       105 ~~~~~~-~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~  177 (181)
                      .+.+++ ..|++||+++++|+++|+.++++ +||+||+|+||+|+|++....... .+++    .+.+....  |++|++
T Consensus       184 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~  261 (315)
T 2o2s_A          184 RVVPGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIGKSGEKSFIDYAIDYSYNNA--PLRRDL  261 (315)
T ss_dssp             SCCTTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTTCSSSSCHHHHHHHHHHHHS--SSCCCC
T ss_pred             ccCCCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhccccccchhHHHHHHHHhccC--CCCCCC
Confidence            888887 58999999999999999999985 899999999999999987654321 1112    22223344  889999


Q ss_pred             ccCC
Q 042200          178 KAAD  181 (181)
Q Consensus       178 ~~~e  181 (181)
                      +|+|
T Consensus       262 ~ped  265 (315)
T 2o2s_A          262 HSDD  265 (315)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9875

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=99.94  E-value=3.3e-27  Score=174.84  Aligned_cols=143  Identities=20%  Similarity=0.171  Sum_probs=124.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.++..           ...+.+|++|.+++++++++  .+++++|+||||||..... ..+.+.+.
T Consensus        42 l~~~G~~V~~~~r~~~~~~-----------~~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~-~~~~~~~~  109 (251)
T 3orf_A           42 FKSKSWNTISIDFRENPNA-----------DHSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAAGGWSGG-NASSDEFL  109 (251)
T ss_dssp             HHHTTCEEEEEESSCCTTS-----------SEEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECCCCCCCB-CTTSTTHH
T ss_pred             HHHCCCEEEEEeCCccccc-----------ccceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECCccCCCC-CcccccCH
Confidence            6789999999999875321           23578899999999999999  7789999999999987651 23667788


Q ss_pred             HHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEEEEEe
Q 042200           80 EKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVNSIA  142 (181)
Q Consensus        80 ~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v~~i~  142 (181)
                      ++|+..+++|+.               .|+||++||..+..+.++...|+++|++++.|+++++.+++  ++||++|+|+
T Consensus       110 ~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~  189 (251)
T 3orf_A          110 KSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNRTSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGIL  189 (251)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEE
T ss_pred             HHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccCCCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEe
Confidence            999999999998               57999999999999999999999999999999999999987  8899999999


Q ss_pred             cCcccCcccchhcC
Q 042200          143 HIVSATPFFCNAMG  156 (181)
Q Consensus       143 Pg~v~t~~~~~~~~  156 (181)
                      ||+++|++.....+
T Consensus       190 PG~v~t~~~~~~~~  203 (251)
T 3orf_A          190 PVTLDTPTNRKYMS  203 (251)
T ss_dssp             ESCBCCHHHHHHCT
T ss_pred             cCcCcCcchhhhcc
Confidence            99999998766543

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=99.94  E-value=1.4e-26  Score=171.36  Aligned_cols=161  Identities=21%  Similarity=0.252  Sum_probs=132.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+..+    ++.   .+.++ +|+  .+++++++++  ..++|+||||||....  ..+.+.+.++
T Consensus        39 l~~~G~~V~~~~r~~~~~~----~~~---~~~~~-~D~--~~~~~~~~~~--~~~iD~lv~~Ag~~~~--~~~~~~~~~~  104 (249)
T 1o5i_A           39 LSQEGAEVTICARNEELLK----RSG---HRYVV-CDL--RKDLDLLFEK--VKEVDILVLNAGGPKA--GFFDELTNED  104 (249)
T ss_dssp             HHHTTCEEEEEESCHHHHH----HTC---SEEEE-CCT--TTCHHHHHHH--SCCCSEEEECCCCCCC--BCGGGCCHHH
T ss_pred             HHHCCCEEEEEcCCHHHHH----hhC---CeEEE-eeH--HHHHHHHHHH--hcCCCEEEECCCCCCC--CChhhCCHHH
Confidence            6789999999999975443    232   46777 999  6678888885  2379999999998766  7788899999


Q ss_pred             HHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           82 VKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        82 ~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      |+..+++|+.                 .|+||++||..+..+.++...|+++|+++++|+++++.+++++||++|+|+||
T Consensus       105 ~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg  184 (249)
T 1o5i_A          105 FKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPG  184 (249)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred             HHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCCCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeC
Confidence            9999999986                 48999999999999999999999999999999999999999999999999999


Q ss_pred             cccCcccchhcCCChHHHH-HHHHHhhcccccccccCC
Q 042200          145 VSATPFFCNAMGIDKKTFK-ELLYASANLKGVVLKAAD  181 (181)
Q Consensus       145 ~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e  181 (181)
                      ++.|++.....   ++..+ .+....  |++|+++|+|
T Consensus       185 ~v~t~~~~~~~---~~~~~~~~~~~~--p~~~~~~~~d  217 (249)
T 1o5i_A          185 WTETERVKELL---SEEKKKQVESQI--PMRRMAKPEE  217 (249)
T ss_dssp             SBCCTTHHHHS---CHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             CCccCcccccc---hhhHHHHHHhcC--CCCCCcCHHH
Confidence            99999875542   22333 333334  7788888864

>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...

Probab=99.94  E-value=3.3e-27  Score=181.11  Aligned_cols=152  Identities=17%  Similarity=0.108  Sum_probs=123.9

Q ss_pred             CcccCCCEEEEeecchHHH---HHHHhHcC---C-CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCC
Q 042200            1 VFIQHRAKVIIADVQDDLC---RALCKEFD---S-DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~---~~~~~~~~---~-~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      +|+++|++|++++|+...+   .+..+.+.   . ..++.++.+|++|.+++++++++-.++++|+||||||....  .+
T Consensus        21 ~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g~iD~lVnnAG~~~~--~~   98 (327)
T 1jtv_A           21 RLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLL--GP   98 (327)
T ss_dssp             HHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCC--SC
T ss_pred             HHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcCCCCEEEECCCcCCC--Cc
Confidence            3788999998888764322   22222221   1 13789999999999999999998224789999999998765  77


Q ss_pred             cccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           74 TLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      +.+.+.++|+..+++|+.                 .|+||++||.++..+.+....|++||+++++|+++++.+++++||
T Consensus        99 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~~gI  178 (327)
T 1jtv_A           99 LEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGV  178 (327)
T ss_dssp             GGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTE
T ss_pred             hhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCCCCChHHHHHHHHHHHHHHHHHHHhhhcCc
Confidence            888899999999999998                 589999999999999899999999999999999999999999999


Q ss_pred             EEEEEecCcccCcccchh
Q 042200          137 RVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~~~~~  154 (181)
                      +||+|+||+|+|+|....
T Consensus       179 ~v~~v~PG~v~T~~~~~~  196 (327)
T 1jtv_A          179 HLSLIECGPVHTAFMEKV  196 (327)
T ss_dssp             EEEEEEECCBCC------
T ss_pred             EEEEEEeCcccChHHhhh
Confidence            999999999999987654

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=99.94  E-value=4.4e-27  Score=173.49  Aligned_cols=147  Identities=16%  Similarity=0.149  Sum_probs=103.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |++ |+.|++++|+.+.+++..+ +.   ++.++.+|+++.++...+.+. .+++++|+||||||....  ..+.+.+.+
T Consensus        25 l~~-g~~v~~~~r~~~~~~~~~~-~~---~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~--~~~~~~~~~   97 (245)
T 3e9n_A           25 LSR-DHIVYALGRNPEHLAALAE-IE---GVEPIESDIVKEVLEEGGVDKLKNLDHVDTLVHAAAVARD--TTIEAGSVA   97 (245)
T ss_dssp             HTT-TSEEEEEESCHHHHHHHHT-ST---TEEEEECCHHHHHHTSSSCGGGTTCSCCSEEEECC------------CHHH
T ss_pred             HhC-CCeEEEEeCCHHHHHHHHh-hc---CCcceecccchHHHHHHHHHHHHhcCCCCEEEECCCcCCC--CchhhCCHH
Confidence            455 9999999999988877655 32   688999999998773333333 677899999999999876  777888999


Q ss_pred             HHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           81 KVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        81 ~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      +|+..+++|+.                .|+||++||..+..+.++...|++||++++.|+++|+.+++++||++|+|+||
T Consensus        98 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG  177 (245)
T 3e9n_A           98 EWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAGNGPHPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPG  177 (245)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC----------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEEC
T ss_pred             HHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCcccccCCCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecC
Confidence            99999999997                57999999999999999999999999999999999999999999999999999


Q ss_pred             cccCcccchhc
Q 042200          145 VSATPFFCNAM  155 (181)
Q Consensus       145 ~v~t~~~~~~~  155 (181)
                      ++.|++.....
T Consensus       178 ~v~t~~~~~~~  188 (245)
T 3e9n_A          178 PTNTPMLQGLM  188 (245)
T ss_dssp             CC---------
T ss_pred             CccCchhhhhh
Confidence            99999876653

>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*

Probab=99.94  E-value=9.6e-27  Score=176.22  Aligned_cols=137  Identities=17%  Similarity=0.136  Sum_probs=111.9

Q ss_pred             hhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEecccccc
Q 042200           42 DSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATE  104 (181)
Q Consensus        42 ~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~  104 (181)
                      .+++++++++  .+++++|+||||||.......++.+.+.++|+..+++|+.               .|+||++||.++.
T Consensus       103 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~  182 (297)
T 1d7o_A          103 NWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASE  182 (297)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccc
Confidence            6788888888  6788999999999975411167788999999999999998               4799999999999


Q ss_pred             ccCccc-hhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          105 TIGEAL-YDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       105 ~~~~~~-~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      .+.+++ ..|++||+++++|+++|+.++++ +||+||+|+||++.|++..... ..++..+......  |++|+++|+|
T Consensus       183 ~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~-~~~~~~~~~~~~~--p~~r~~~ped  258 (297)
T 1d7o_A          183 RIIPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG-FIDTMIEYSYNNA--PIQKTLTADE  258 (297)
T ss_dssp             SCCTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS-HHHHHHHHHHHHS--SSCCCBCHHH
T ss_pred             cCCCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc-ccHHHHHHhhccC--CCCCCCCHHH
Confidence            888887 69999999999999999999985 8999999999999999865421 1123334444444  8899998875

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=99.93  E-value=1e-26  Score=171.23  Aligned_cols=143  Identities=16%  Similarity=0.082  Sum_probs=125.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--ccc--CCccEEEEcccccCCCCCCc-c
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKF--GKLDIMFNNAGIISNMDRTT-L   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~--~~id~vi~~ag~~~~~~~~~-~   75 (181)
                      +|+++|++|++++|+.+...       .  ...++.+|++|.+++++++++  .++  +++|+||||||....  .++ .
T Consensus        26 ~l~~~G~~V~~~~r~~~~~~-------~--~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~--~~~~~   94 (241)
T 1dhr_A           26 AFRARNWWVASIDVVENEEA-------S--ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAG--GNAKS   94 (241)
T ss_dssp             HHHTTTCEEEEEESSCCTTS-------S--EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC--BCTTC
T ss_pred             HHHhCCCEEEEEeCChhhcc-------C--CcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEEEEcccccCC--CCCcc
Confidence            36789999999999865432       1  467789999999999999998  666  789999999998765  666 6


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v  138 (181)
                      +.+.++|+..+++|+.               .|+||++||.++..+.++...|+++|+++++|+++++.+++  ++||++
T Consensus        95 ~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v  174 (241)
T 1dhr_A           95 KSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAA  174 (241)
T ss_dssp             TTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEE
T ss_pred             cCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccCCCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEE
Confidence            7788999999999988               47999999999999999999999999999999999999999  899999


Q ss_pred             EEEecCcccCcccchh
Q 042200          139 NSIAHIVSATPFFCNA  154 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~  154 (181)
                      |+|+||+++|++....
T Consensus       175 ~~v~PG~v~T~~~~~~  190 (241)
T 1dhr_A          175 IAVLPVTLDTPMNRKS  190 (241)
T ss_dssp             EEEEESCEECHHHHHH
T ss_pred             EEEecCcccCcccccc
Confidence            9999999999987653

>2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella}

Probab=99.93  E-value=3.7e-27  Score=180.24  Aligned_cols=138  Identities=17%  Similarity=0.118  Sum_probs=83.3

Q ss_pred             hhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEecccccc
Q 042200           42 DSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATE  104 (181)
Q Consensus        42 ~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~  104 (181)
                      .+++++++++  .+++++|+||||||.......++.+.+.++|+..+++|+.               .|+||++||..+.
T Consensus       117 ~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~  196 (319)
T 2ptg_A          117 GFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASE  196 (319)
T ss_dssp             CCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC--
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccc
Confidence            4588888888  6788999999999976311167788999999999999998               4899999999998


Q ss_pred             ccCccc-hhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcccchhcCC-ChHHH----HHHHHHhhccccccc
Q 042200          105 TIGEAL-YDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPFFCNAMGI-DKKTF----KELLYASANLKGVVL  177 (181)
Q Consensus       105 ~~~~~~-~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~  177 (181)
                      .+.+++ ..|+++|+++++|+++|+.++++ +||+||+|+||+++|++....... .++..    +.+....  |++|++
T Consensus       197 ~~~~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~  274 (319)
T 2ptg_A          197 KVIPGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANA--PLQKEL  274 (319)
T ss_dssp             ----------------THHHHHHHHHHHHHHHCCEEEEEEECCCC---------------------------------CC
T ss_pred             cccCccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccC--CCCCCC
Confidence            888887 68999999999999999999985 899999999999999987654311 11111    1222334  789999


Q ss_pred             ccCC
Q 042200          178 KAAD  181 (181)
Q Consensus       178 ~~~e  181 (181)
                      +|+|
T Consensus       275 ~pee  278 (319)
T 2ptg_A          275 ESDD  278 (319)
T ss_dssp             CHHH
T ss_pred             CHHH
Confidence            9875

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=99.93  E-value=6.4e-26  Score=169.22  Aligned_cols=143  Identities=20%  Similarity=0.312  Sum_probs=121.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+.+++..+++...   .++.++.+|++|.++++++++.  .+++++|+||||||...        
T Consensus        27 l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~~Ag~~~--------   98 (267)
T 2gdz_A           27 LLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNN--------   98 (267)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCC--------
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC--------
Confidence            6789999999999988887776666442   3688999999999999999998  77899999999999653        


Q ss_pred             CCHHHHHHhhheeec--------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHH--HHHhcCC
Q 042200           77 TDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNL--CVELGQY  134 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~l--a~~~~~~  134 (181)
                        .++|+..+++|+.                    .|+||++||..+..+.++...|+++|+++++|++++  +.+++++
T Consensus        99 --~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~~ala~e~~~~  176 (267)
T 2gdz_A           99 --EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMNS  176 (267)
T ss_dssp             --SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             --hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHhccC
Confidence              2346667777754                    268999999999998899999999999999999995  6889999


Q ss_pred             CeEEEEEecCcccCcccchh
Q 042200          135 DIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ||++|+|+||++.|++....
T Consensus       177 gi~v~~v~Pg~v~t~~~~~~  196 (267)
T 2gdz_A          177 GVRLNAICPGFVNTAILESI  196 (267)
T ss_dssp             CEEEEEEEESCBSSHHHHGG
T ss_pred             CcEEEEEecCcCcchhhhcc
Confidence            99999999999999986543

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.93  E-value=2.5e-26  Score=188.53  Aligned_cols=147  Identities=21%  Similarity=0.306  Sum_probs=125.5

Q ss_pred             CcccCCCEEEEeecch---------HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccC
Q 042200            1 VFIQHRAKVIIADVQD---------DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~---------~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~   68 (181)
                      +|+++|++|++++|+.         +.+++..+++... .+   ..+|++|.+++++++++  .++|++|+||||||+..
T Consensus        27 ~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~---~~~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~  103 (604)
T 2et6_A           27 EFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGV---AVADYNNVLDGDKIVETAVKNFGTVHVIINNAGILR  103 (604)
T ss_dssp             HHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCE---EEEECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred             HHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCe---EEEEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence            3789999999998764         5566666665432 22   23688888888888888  77899999999999876


Q ss_pred             CCCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           69 NMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      .  .++.+++.++|+.++++|+.                 .|+||++||.++..+.+++..|++||+++.+|+++|+.|+
T Consensus       104 ~--~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El  181 (604)
T 2et6_A          104 D--ASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNFGQANYASAKSALLGFAETLAKEG  181 (604)
T ss_dssp             C--BCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTBHHHHHHHHHHHHHHHHHHHHH
T ss_pred             C--CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            6  78889999999999999999                 5899999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEEecCcccCcccch
Q 042200          132 GQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +++||+||+|+|| +.|+|+..
T Consensus       182 ~~~gIrVn~v~Pg-~~T~m~~~  202 (604)
T 2et6_A          182 AKYNIKANAIAPL-ARSRMTES  202 (604)
T ss_dssp             GGGTEEEEEEEEC-CCCHHHHT
T ss_pred             CccCeEEEEEccC-CcCccccc
Confidence            9999999999998 68887654

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.93  E-value=2.7e-26  Score=168.35  Aligned_cols=142  Identities=18%  Similarity=0.138  Sum_probs=124.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--ccc--CCccEEEEcccccCCCCCCc-cc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKF--GKLDIMFNNAGIISNMDRTT-LD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~--~~id~vi~~ag~~~~~~~~~-~~   76 (181)
                      |+++|++|++++|+.+...       .  ...++.+|+++.+++++++++  .++  +++|+||||||....  .++ .+
T Consensus        23 l~~~G~~V~~~~r~~~~~~-------~--~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~--~~~~~~   91 (236)
T 1ooe_A           23 FKKNGYTVLNIDLSANDQA-------D--SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAG--GSASSK   91 (236)
T ss_dssp             HHHTTEEEEEEESSCCTTS-------S--EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCC--BCTTST
T ss_pred             HHHCCCEEEEEecCccccc-------c--ccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEEEECCcccCC--CCCccc
Confidence            6789999999999875432       1  467789999999999999988  666  689999999998765  566 67


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v~  139 (181)
                      .+.++|+..+++|+.               .|+||++||..+..+.++...|+++|+++++|+++++.+++  ++||++|
T Consensus        92 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~  171 (236)
T 1ooe_A           92 DFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL  171 (236)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEE
T ss_pred             CCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEE
Confidence            788999999999988               47999999999999999999999999999999999999998  8999999


Q ss_pred             EEecCcccCcccchh
Q 042200          140 SIAHIVSATPFFCNA  154 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~  154 (181)
                      +|+||+++|++....
T Consensus       172 ~v~Pg~v~t~~~~~~  186 (236)
T 1ooe_A          172 TIMPVTLDTPMNRKW  186 (236)
T ss_dssp             EEEESCBCCHHHHHH
T ss_pred             EEecCcccCcchhhc
Confidence            999999999987653

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=99.93  E-value=1.8e-25  Score=168.38  Aligned_cols=149  Identities=13%  Similarity=0.158  Sum_probs=128.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEc-ccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNN-AGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~-ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.+++++..+++...  .++.++.+|++|.+++++++++  .+++++|+|||| ||.. .  ..+.+
T Consensus        48 l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~li~naag~~-~--~~~~~  124 (286)
T 1xu9_A           48 LAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNT-S--LNLFH  124 (286)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCC-C--CCCCC
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCccCC-C--Ccccc
Confidence            6789999999999998887776654321  2688999999999999999988  667899999999 5654 3  34455


Q ss_pred             CCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh--cCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL--GQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~--~~~~i~v  138 (181)
                      .+.++++..+++|+.                .|+||++||.++..+.++...|++||+++++|+++++.++  ...||++
T Consensus       125 ~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v  204 (286)
T 1xu9_A          125 DDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSI  204 (286)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEE
Confidence            788999999999988                4799999999999999999999999999999999999999  6789999


Q ss_pred             EEEecCcccCcccch
Q 042200          139 NSIAHIVSATPFFCN  153 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~  153 (181)
                      ++|+||+++|++...
T Consensus       205 ~~v~Pg~v~t~~~~~  219 (286)
T 1xu9_A          205 TLCVLGLIDTETAMK  219 (286)
T ss_dssp             EEEEECCBCCHHHHH
T ss_pred             EEeecCccCChhHHH
Confidence            999999999998643

>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=99.93  E-value=7.5e-26  Score=166.17  Aligned_cols=162  Identities=22%  Similarity=0.219  Sum_probs=132.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCC--
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTD--   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~--   78 (181)
                      |+++|++|++++|+.+ .          .++.++.+|++|.+++++++++ .+++++|+||||||....  ..+.+.+  
T Consensus        22 l~~~G~~V~~~~r~~~-~----------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~~--~~~~~~~~~   88 (242)
T 1uay_A           22 LKARGYRVVVLDLRRE-G----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLA--EKILGKEGP   88 (242)
T ss_dssp             HHHHTCEEEEEESSCC-S----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCC--CCSBCSSSB
T ss_pred             HHHCCCEEEEEccCcc-c----------cceEEEeCCCCCHHHHHHHHHHHHhhCCceEEEEcccccCc--ccccccccc
Confidence            6788999999999865 1          1467899999999999999988 667899999999998765  4444443  


Q ss_pred             --HHHHHHhhheeec---------------c--------eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           79 --NEKVKRVMIMVVF---------------L--------GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        79 --~~~~~~~~~~n~~---------------~--------~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                        .++|+..+++|+.               .        ++||++||..+..+.++...|+++|++++.++++++.++++
T Consensus        89 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~l~~e~~~  168 (242)
T 1uay_A           89 HGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAG  168 (242)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred             cchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhccCCCCCchhhHHHHHHHHHHHHHHHHHhh
Confidence              4489999999987               1        29999999999988889999999999999999999999999


Q ss_pred             CCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccc-ccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      +||++++|+||++.|++....   .+...+.+....  |+ +++.+|+|
T Consensus       169 ~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~d  212 (242)
T 1uay_A          169 WGIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQV--PFPPRLGRPEE  212 (242)
T ss_dssp             GTEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTC--CSSCSCCCHHH
T ss_pred             cCcEEEEEEeccCcchhhhcc---chhHHHHHHhhC--CCcccCCCHHH
Confidence            999999999999999987553   233333333333  66 78877764

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=99.93  E-value=2.4e-25  Score=182.69  Aligned_cols=146  Identities=23%  Similarity=0.275  Sum_probs=119.5

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++.+|. .+...+.+....  .++..+.+|++  ++.++++++  .++|++|+||||||+...  .++.++
T Consensus       341 ~la~~Ga~Vv~~~~~~~~~~~~~i~~~g--~~~~~~~~Dv~--~~~~~~~~~~~~~~G~iDiLVnNAGi~~~--~~~~~~  414 (604)
T 2et6_A          341 WFAKYGAKVVVNDFKDATKTVDEIKAAG--GEAWPDQHDVA--KDSEAIIKNVIDKYGTIDILVNNAGILRD--RSFAKM  414 (604)
T ss_dssp             HHHHTTCEEEEECSSCCHHHHHHHHHTT--CEEEEECCCHH--HHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTC
T ss_pred             HHHHCCCEEEEEeCccHHHHHHHHHhcC--CeEEEEEcChH--HHHHHHHHHHHHhcCCCCEEEECCCCCCC--CChhhC
Confidence            378999999999863 233322222222  36778888983  344556666  578999999999999766  788899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|+.++++|+.                 .|+||++||.++..+.+++..|++||+++.+|+++|+.|++++||+||+
T Consensus       415 ~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~  494 (604)
T 2et6_A          415 SKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGNFGQANYSSSKAGILGLSKTMAIEGAKNNIKVNI  494 (604)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCChhHHHHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            99999999999999                 5899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccch
Q 042200          141 IAHIVSATPFFCN  153 (181)
Q Consensus       141 i~Pg~v~t~~~~~  153 (181)
                      |+||. .|+|...
T Consensus       495 v~PG~-~T~m~~~  506 (604)
T 2et6_A          495 VAPHA-ETAMTLS  506 (604)
T ss_dssp             EEECC-CCCC---
T ss_pred             EcCCC-CCccccc
Confidence            99995 9998654

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=99.93  E-value=2.4e-25  Score=170.14  Aligned_cols=147  Identities=20%  Similarity=0.260  Sum_probs=126.3

Q ss_pred             cccCCCEEEEe---------ecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC
Q 042200            2 FIQHRAKVIIA---------DVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         2 l~~~G~~Vv~~---------~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~   70 (181)
                      |+++|++|+++         +|+.+++++..+++.....  ...+|+++.+++++++++  .+++++|+||||||.... 
T Consensus        29 La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~--~~~~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~-  105 (319)
T 1gz6_A           29 FAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGG--KAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD-  105 (319)
T ss_dssp             HHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTC--EEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCC-
T ss_pred             HHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCC--eEEEeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC-
Confidence            68899999996         4567777777666643211  235899999999999887  678899999999998766 


Q ss_pred             CCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                       .++.+.+.++|+..+++|+.                 .++||++||.++..+.+++..|++||++++.|+++|+.++++
T Consensus       106 -~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vsS~~~~~~~~~~~~Y~aSK~a~~~~~~~la~el~~  184 (319)
T 1gz6_A          106 -RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRK  184 (319)
T ss_dssp             -CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTGG
T ss_pred             -CChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCCCCCHHHHHHHHHHHHHHHHHHHHhcc
Confidence             67788999999999999998                 489999999999888889999999999999999999999999


Q ss_pred             CCeEEEEEecCcccCcccch
Q 042200          134 YDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      +||++|+|+||.+ |++...
T Consensus       185 ~gI~vn~v~PG~~-t~~~~~  203 (319)
T 1gz6_A          185 NNIHCNTIAPNAG-SRMTET  203 (319)
T ss_dssp             GTEEEEEEEEECC-STTTGG
T ss_pred             cCEEEEEEeCCCc-cccccc
Confidence            9999999999998 877554

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=99.92  E-value=7.8e-25  Score=161.27  Aligned_cols=148  Identities=16%  Similarity=0.177  Sum_probs=122.3

Q ss_pred             cccCC--CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccC--CccEEEEcccccC-CCCCCc
Q 042200            2 FIQHR--AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFG--KLDIMFNNAGIIS-NMDRTT   74 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~--~id~vi~~ag~~~-~~~~~~   74 (181)
                      |+++|  ++|++++|+.+.++.+. ++. ..++.++.+|+++.+++++++++  .+++  ++|+||||||... .  .++
T Consensus        23 l~~~g~~~~V~~~~r~~~~~~~l~-~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~--~~~   98 (250)
T 1yo6_A           23 LVKDKNIRHIIATARDVEKATELK-SIK-DSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSY--GTN   98 (250)
T ss_dssp             HHTCTTCCEEEEEESSGGGCHHHH-TCC-CTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCB--CTT
T ss_pred             HHhcCCCcEEEEEecCHHHHHHHH-hcc-CCceEEEEeecCCHHHHHHHHHHHHHhcCCCCCcEEEECCcccCCC--ccc
Confidence            67899  99999999987766553 331 24789999999999999999998  6666  8999999999876 4  677


Q ss_pred             ccCCHHHHHHhhheeec---------------c-------------eeEEEeccccccccC-------ccchhhHhhHHH
Q 042200           75 LDTDNEKVKRVMIMVVF---------------L-------------GVLLFTANLATETIG-------EALYDYLMSKYA  119 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~-------------~~iv~iss~~~~~~~-------~~~~~y~~sK~a  119 (181)
                      .+.+.++|+..+++|+.               .             ++||++||..+..+.       ++...|+++|++
T Consensus        99 ~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a  178 (250)
T 1yo6_A           99 TEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA  178 (250)
T ss_dssp             SCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCccccCCcccccccCCccHHHHHHHH
Confidence            78899999999999987               2             479999999888776       578899999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccCcccch
Q 042200          120 VLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       120 ~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ++.|+++++.+++++||++++|+||++.|++...
T Consensus       179 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~  212 (250)
T 1yo6_A          179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK  212 (250)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEECCCC-------
T ss_pred             HHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC
Confidence            9999999999999999999999999999998764

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=99.92  E-value=1.3e-24  Score=161.95  Aligned_cols=150  Identities=15%  Similarity=0.162  Sum_probs=125.8

Q ss_pred             cccCC---CEEEEeecchHHHHHHHhHcCC-CCceEEEeeecCChhHHHHHHHh--cccC--CccEEEEcccccC-CCCC
Q 042200            2 FIQHR---AKVIIADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDF--TKFG--KLDIMFNNAGIIS-NMDR   72 (181)
Q Consensus         2 l~~~G---~~Vv~~~r~~~~~~~~~~~~~~-~~~~~~~~~D~~~~~~i~~~~~~--~~~~--~id~vi~~ag~~~-~~~~   72 (181)
                      |+++|   ++|++++|+.+..+.. .++.. ..++.++.+|+++.+++++++++  ..++  ++|+||||||... .  .
T Consensus        41 L~~~G~~~~~V~~~~r~~~~~~~~-~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~--~  117 (267)
T 1sny_A           41 LLNLPQPPQHLFTTCRNREQAKEL-EDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS--A  117 (267)
T ss_dssp             HHTSSSCCSEEEEEESCTTSCHHH-HHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCC--C
T ss_pred             HHhcCCCCcEEEEEecChhhhHHH-HHhhccCCceEEEEecCCChHHHHHHHHHHHHhcCCCCccEEEECCCcCCCc--c
Confidence            67888   9999999987544332 22211 13789999999999999999998  5666  7999999999876 4  6


Q ss_pred             CcccCCHHHHHHhhheeec---------------c-------------eeEEEeccccccccCc---cchhhHhhHHHHH
Q 042200           73 TTLDTDNEKVKRVMIMVVF---------------L-------------GVLLFTANLATETIGE---ALYDYLMSKYAVL  121 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~---------------~-------------~~iv~iss~~~~~~~~---~~~~y~~sK~a~~  121 (181)
                      ++.+.+.++++..+++|+.               .             ++||++||..+..+.+   +...|+++|++++
T Consensus       118 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~~~~~~Y~~sK~a~~  197 (267)
T 1sny_A          118 RITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALN  197 (267)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHH
T ss_pred             ccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccccccCCCCCCchHHHHHHHHHH
Confidence            7788899999999999988               2             5799999998877653   6788999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCcccchh
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      .|++.++.+++++||++++|+||+++|++....
T Consensus       198 ~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~  230 (267)
T 1sny_A          198 AATKSLSVDLYPQRIMCVSLHPGWVKTDMGGSS  230 (267)
T ss_dssp             HHHHHHHHHHGGGTCEEEEECCCSBCSTTTCTT
T ss_pred             HHHHHHHHHhhcCCcEEEEeCCcceecCCCCCC
Confidence            999999999999999999999999999987653

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=99.92  E-value=2.4e-25  Score=183.23  Aligned_cols=148  Identities=20%  Similarity=0.303  Sum_probs=113.7

Q ss_pred             CcccCCCEEEEeec---------chHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC
Q 042200            1 VFIQHRAKVIIADV---------QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r---------~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~   69 (181)
                      +|+++|++|++++|         +.+.++...+++....  ....+|+++.+++++++++  .+++++|+||||||+...
T Consensus        38 ~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~  115 (613)
T 3oml_A           38 LFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAG--GEAVADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRD  115 (613)
T ss_dssp             HHHHTTCEEEEC--------------CHHHHHHHHHHTT--CCEEECCCCGGGHHHHHC----------CEECCCCCCCC
T ss_pred             HHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhC--CeEEEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCC
Confidence            37889999999988         6666666666664421  1234899999999999998  778999999999999877


Q ss_pred             CCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           70 MDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                        .++.+.+.++|+.++++|+.                 .|+||++||.++..+.+++..|++||+++.+|+++|+.|++
T Consensus       116 --~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~isS~a~~~~~~~~~~Y~asKaal~~lt~~la~e~~  193 (613)
T 3oml_A          116 --RSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMTSSNSGIYGNFGQVNYTAAKMGLIGLANTVAIEGA  193 (613)
T ss_dssp             --CCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHG
T ss_pred             --CCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCCCChHHHHHHHHHHHHHHHHHHHhC
Confidence              78889999999999999998                 58999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCcccCcccch
Q 042200          133 QYDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ++||+||+|+||.+ |++...
T Consensus       194 ~~gI~vn~v~Pg~~-t~~~~~  213 (613)
T 3oml_A          194 RNNVLCNVIVPTAA-SRMTEG  213 (613)
T ss_dssp             GGTEEEEEEEEC-------CC
T ss_pred             ccCeEEEEEECCCC-Chhhhh
Confidence            99999999999975 555443

>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}

Probab=99.92  E-value=3.7e-24  Score=153.71  Aligned_cols=141  Identities=12%  Similarity=0.168  Sum_probs=122.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++  +|++++|+.+++++..+++.   . .++.+|++|.+++.+++++  ++++|+||||||....  .++.+.+.++
T Consensus        20 l~~~--~V~~~~r~~~~~~~~~~~~~---~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~~~~--~~~~~~~~~~   89 (207)
T 2yut_A           20 LKGH--DLLLSGRRAGALAELAREVG---A-RALPADLADELEAKALLEE--AGPLDLLVHAVGKAGR--ASVREAGRDL   89 (207)
T ss_dssp             TTTS--EEEEECSCHHHHHHHHHHHT---C-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCCCCCC--BCSCC---CH
T ss_pred             HHhC--CEEEEECCHHHHHHHHHhcc---C-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCcCCC--CChhhCCHHH
Confidence            5555  99999999988887766664   2 7889999999999999985  6789999999998765  6777788899


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      |+..+++|+.             .++||++||..+..+.++...|+++|++++.+++.++.+++++||++++|+||++.|
T Consensus        90 ~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t  169 (207)
T 2yut_A           90 VEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQVPGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVAT  169 (207)
T ss_dssp             HHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHSSTTBHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCS
T ss_pred             HHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccCCCCcchHHHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccC
Confidence            9999999987             479999999999988899999999999999999999999999999999999999999


Q ss_pred             cccc
Q 042200          149 PFFC  152 (181)
Q Consensus       149 ~~~~  152 (181)
                      ++..
T Consensus       170 ~~~~  173 (207)
T 2yut_A          170 GLWA  173 (207)
T ss_dssp             GGGG
T ss_pred             CCcc
Confidence            9743

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=99.91  E-value=4.5e-25  Score=163.47  Aligned_cols=142  Identities=18%  Similarity=0.250  Sum_probs=118.1

Q ss_pred             CcccCCCE-EEEeecch--HHHHHHHhHcCCCCceEEEeeecCCh-hHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAK-VIIADVQD--DLCRALCKEFDSDELISYVCCNVTID-SDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~-Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++ |++++|+.  +.+++..+... ..++.++.+|++|. +++++++++  .+++++|+||||||...      
T Consensus        24 ~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~id~lv~~Ag~~~------   96 (254)
T 1sby_A           24 ELVKRNLKNFVILDRVENPTALAELKAINP-KVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGILD------   96 (254)
T ss_dssp             HHHHTCCSEEEEEESSCCHHHHHHHHHHCT-TSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCCC------
T ss_pred             HHHHCCCcEEEEEecCchHHHHHHHHHhCC-CceEEEEEEecCCChHHHHHHHHHHHHhcCCCCEEEECCccCC------
Confidence            36789996 99999985  34444433332 13688999999998 999999988  67789999999999642      


Q ss_pred             ccCCHHHHHHhhheeec---------------c-----eeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           75 LDTDNEKVKRVMIMVVF---------------L-----GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~---------------~-----~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                          .++|+..+++|+.               .     |+||++||.++..+.++...|++||++++.|+++++.+++++
T Consensus        97 ----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~  172 (254)
T 1sby_A           97 ----DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPIT  172 (254)
T ss_dssp             ----TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ----HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCCCCchHHHHHHHHHHHHHHHHHHHhccC
Confidence                3457778888876               1     679999999999999999999999999999999999999888


Q ss_pred             CeEEEEEecCcccCcccch
Q 042200          135 DIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~  153 (181)
                      ||++++|+||+++|++...
T Consensus       173 gi~v~~v~Pg~v~t~~~~~  191 (254)
T 1sby_A          173 GVTAYSINPGITRTPLVHT  191 (254)
T ss_dssp             SEEEEEEEECSEESHHHHS
T ss_pred             CeEEEEEecCCccCccccc
Confidence            9999999999999998654

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=99.91  E-value=3.5e-24  Score=159.85  Aligned_cols=149  Identities=16%  Similarity=0.160  Sum_probs=123.4

Q ss_pred             ccc-CCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQ-HRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~-~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |++ +|++|++++|+.+.+++..+++... .++.++.+|+++.+++++++++  .+++++|+||||||....  .. ...
T Consensus        24 L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~li~~Ag~~~~--~~-~~~  100 (276)
T 1wma_A           24 LCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK--VA-DPT  100 (276)
T ss_dssp             HHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCC--TT-CCS
T ss_pred             HHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCccccc--CC-Ccc
Confidence            567 8999999999988887776666332 4688999999999999999998  667899999999998654  33 233


Q ss_pred             C-HHHHHHhhheeec---------------ceeEEEeccccccccC----------------------------------
Q 042200           78 D-NEKVKRVMIMVVF---------------LGVLLFTANLATETIG----------------------------------  107 (181)
Q Consensus        78 ~-~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~----------------------------------  107 (181)
                      + .++++..+++|+.               .++||++||..+..+.                                  
T Consensus       101 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~  180 (276)
T 1wma_A          101 PFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKK  180 (276)
T ss_dssp             CHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHT
T ss_pred             ccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhcc
Confidence            4 5889999999988               3699999998776431                                  


Q ss_pred             -------ccchhhHhhHHHHHHHHHHHHHHhcC----CCeEEEEEecCcccCcccch
Q 042200          108 -------EALYDYLMSKYAVLGLMKNLCVELGQ----YDIRVNSIAHIVSATPFFCN  153 (181)
Q Consensus       108 -------~~~~~y~~sK~a~~~l~~~la~~~~~----~~i~v~~i~Pg~v~t~~~~~  153 (181)
                             .+...|+++|++++.|++.++.++.+    +||++++|+||++.|++...
T Consensus       181 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~  237 (276)
T 1wma_A          181 GVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP  237 (276)
T ss_dssp             TCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT
T ss_pred             cccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc
Confidence                   12378999999999999999999987    79999999999999998754

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=99.89  E-value=1.3e-24  Score=161.02  Aligned_cols=155  Identities=14%  Similarity=0.153  Sum_probs=109.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhccc-CCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKF-GKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.++++       .  .   +.+|+++.+++++++++  + +++|+||||||..... .        
T Consensus        21 l~~~G~~V~~~~r~~~~~~-------~--~---~~~Dl~~~~~v~~~~~~--~~~~id~lv~~Ag~~~~~-~--------   77 (257)
T 1fjh_A           21 LEAAGHQIVGIDIRDAEVI-------A--D---LSTAEGRKQAIADVLAK--CSKGMDGLVLCAGLGPQT-K--------   77 (257)
T ss_dssp             HHHTTCEEEEEESSSSSEE-------C--C---TTSHHHHHHHHHHHHTT--CTTCCSEEEECCCCCTTC-S--------
T ss_pred             HHHCCCEEEEEeCCchhhc-------c--c---cccCCCCHHHHHHHHHH--hCCCCCEEEECCCCCCCc-c--------
Confidence            6789999999999865321       1  1   77899999999999884  5 7899999999976420 1        


Q ss_pred             HHHHhhheeec-----------------ceeEEEecccccc----------------------------ccCccchhhHh
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATE----------------------------TIGEALYDYLM  115 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~----------------------------~~~~~~~~y~~  115 (181)
                      .|+..+++|+.                 .++||++||..+.                            .+.++...|++
T Consensus        78 ~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~  157 (257)
T 1fjh_A           78 VLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAG  157 (257)
T ss_dssp             SHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHH
T ss_pred             cHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcccchhhhhhhhhcccCCCCccHHHH
Confidence            27888888877                 3899999999887                            34457789999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          116 SKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       116 sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||++++.|+++++.+++++||++|+|+||.+.|++......  .............|++|+.+|+|
T Consensus       158 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~d  221 (257)
T 1fjh_A          158 SKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ--DPRYGESIAKFVPPMGRRAEPSE  221 (257)
T ss_dssp             HHHHHHHHHHHTHHHHHHTTCEEEEEEECC-----------------------CCCSTTSCCCTHH
T ss_pred             HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhcc--chhHHHHHHhcccccCCCCCHHH
Confidence            99999999999999999999999999999999998765421  11112222211126788888764

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=99.88  E-value=2e-22  Score=144.27  Aligned_cols=128  Identities=20%  Similarity=0.213  Sum_probs=113.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+ +|++|++++|+.+                .+.+|+++.++++++++.  ++++|+||||||....  .++.+.+.++
T Consensus        23 l~-~g~~V~~~~r~~~----------------~~~~D~~~~~~~~~~~~~--~~~~d~vi~~ag~~~~--~~~~~~~~~~   81 (202)
T 3d7l_A           23 LE-KKAEVITAGRHSG----------------DVTVDITNIDSIKKMYEQ--VGKVDAIVSATGSATF--SPLTELTPEK   81 (202)
T ss_dssp             HT-TTSEEEEEESSSS----------------SEECCTTCHHHHHHHHHH--HCCEEEEEECCCCCCC--CCGGGCCHHH
T ss_pred             HH-CCCeEEEEecCcc----------------ceeeecCCHHHHHHHHHH--hCCCCEEEECCCCCCC--CChhhCCHHH
Confidence            56 7899999988753                378999999999999984  4689999999998765  6778889999


Q ss_pred             HHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcc
Q 042200           82 VKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS  146 (181)
Q Consensus        82 ~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v  146 (181)
                      |+..+++|+.               .++||++||..+..+.++...|+++|++++.+++.++.++ ++||+++.|+||++
T Consensus        82 ~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~Y~~sK~~~~~~~~~~~~e~-~~gi~v~~v~pg~v  160 (202)
T 3d7l_A           82 NAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEM-PRGIRINTVSPNVL  160 (202)
T ss_dssp             HHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHTTSC-STTCEEEEEEECCB
T ss_pred             HHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhhcCCCCccHHHHHHHHHHHHHHHHHHHHc-cCCeEEEEEecCcc
Confidence            9999999987               3699999999998888999999999999999999999999 78999999999999


Q ss_pred             cCccc
Q 042200          147 ATPFF  151 (181)
Q Consensus       147 ~t~~~  151 (181)
                      .|++.
T Consensus       161 ~~~~~  165 (202)
T 3d7l_A          161 EESWD  165 (202)
T ss_dssp             GGGHH
T ss_pred             CCchh
Confidence            99864

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=99.88  E-value=1.2e-22  Score=179.89  Aligned_cols=146  Identities=18%  Similarity=0.150  Sum_probs=121.9

Q ss_pred             cccCCCEEEEe-ecchHHHHHHHhHc----CCC-CceEEEeeecCChhHHHHHHHh--cc-----cC-CccEEEEccccc
Q 042200            2 FIQHRAKVIIA-DVQDDLCRALCKEF----DSD-ELISYVCCNVTIDSDVKNVFDF--TK-----FG-KLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~-~r~~~~~~~~~~~~----~~~-~~~~~~~~D~~~~~~i~~~~~~--~~-----~~-~id~vi~~ag~~   67 (181)
                      |+++|++|+++ +|+.+.+++..+++    ... .++.++.||++|.++++++++.  .+     +| ++|+||||||+.
T Consensus       696 La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~  775 (1887)
T 2uv8_A          696 LLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIP  775 (1887)
T ss_dssp             HHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHSCTTTTSCCCCCSEEEECCCCC
T ss_pred             HHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcC
Confidence            67899999998 57777666554443    222 4789999999999999999998  55     56 899999999987


Q ss_pred             CCCCC-CcccCC--HHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHH-H
Q 042200           68 SNMDR-TTLDTD--NEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGL-M  124 (181)
Q Consensus        68 ~~~~~-~~~~~~--~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l-~  124 (181)
                      ..  . ++.+.+  .++|+.++++|+.                   .|+||++||..+..+  +...|++||+++++| +
T Consensus       776 ~~--~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g--g~~aYaASKAAL~~Ltt  851 (1887)
T 2uv8_A          776 EQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMYSESKLSLETLFN  851 (1887)
T ss_dssp             CC--SBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTCSS--CBTTHHHHHHHGGGHHH
T ss_pred             CC--CCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhccC--CCchHHHHHHHHHHHHH
Confidence            65  6 788888  8999999999998                   279999999988876  678999999999999 9


Q ss_pred             HHHHHHhcCCCeEEEEEecCccc-Ccccc
Q 042200          125 KNLCVELGQYDIRVNSIAHIVSA-TPFFC  152 (181)
Q Consensus       125 ~~la~~~~~~~i~v~~i~Pg~v~-t~~~~  152 (181)
                      +.++.+++++ |+||+|+||++. |+|..
T Consensus       852 r~lA~ela~~-IrVNaV~PG~V~tT~m~~  879 (1887)
T 2uv8_A          852 RWHSESWANQ-LTVCGAIIGWTRGTGLMS  879 (1887)
T ss_dssp             HHHHSSCTTT-EEEEEEEECCEECC----
T ss_pred             HHHHHHhCCC-eEEEEEEecccccccccc
Confidence            9999999988 999999999999 78754

>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}

Probab=99.87  E-value=2.7e-22  Score=162.23  Aligned_cols=144  Identities=14%  Similarity=0.086  Sum_probs=123.2

Q ss_pred             cccCCCE-EEEe-ecch-------------HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcc
Q 042200            2 FIQHRAK-VIIA-DVQD-------------DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNA   64 (181)
Q Consensus         2 l~~~G~~-Vv~~-~r~~-------------~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~a   64 (181)
                      |+++|++ |+++ +|+.             +.+++..+++... .++.++.||++|.+++.+++++ .+++++|+|||||
T Consensus       271 La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~A  350 (525)
T 3qp9_A          271 LARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLP  350 (525)
T ss_dssp             HHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECC
T ss_pred             HHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECC
Confidence            6788997 7777 8873             4445555555332 4799999999999999999999 7678999999999


Q ss_pred             cccCCCCCCcccCCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHH
Q 042200           65 GIISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        65 g~~~~~~~~~~~~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~  126 (181)
                      |....  ..+.+.+.++|+.++++|+.                  .++||++||.++..+.+++..|+++|+++++|+  
T Consensus       351 Gv~~~--~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaaaKa~l~~lA--  426 (525)
T 3qp9_A          351 PTVDS--EPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAIWGGAGQGAYAAGTAFLDALA--  426 (525)
T ss_dssp             CCCCC--CCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGTTCCTTCHHHHHHHHHHHHHH--
T ss_pred             cCCCC--CchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHcCCCCCCHHHHHHHHHHHHHH--
Confidence            99877  88889999999999999988                  268999999999999999999999999998874  


Q ss_pred             HHHHhcCCCeEEEEEecCcccCccc
Q 042200          127 LCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                        .++..+||++++|+||+++|+|.
T Consensus       427 --~~~~~~gi~v~sI~pG~~~tgm~  449 (525)
T 3qp9_A          427 --GQHRADGPTVTSVAWSPWEGSRV  449 (525)
T ss_dssp             --TSCCSSCCEEEEEEECCBTTSGG
T ss_pred             --HHHHhCCCCEEEEECCccccccc
Confidence              56778899999999999999986

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=99.87  E-value=9.7e-22  Score=165.70  Aligned_cols=143  Identities=12%  Similarity=0.152  Sum_probs=122.8

Q ss_pred             cc-cCCCE-EEEeecc---hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCC
Q 042200            2 FI-QHRAK-VIIADVQ---DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRT   73 (181)
Q Consensus         2 l~-~~G~~-Vv~~~r~---~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~   73 (181)
                      |+ ++|++ |++++|+   .+.+++..+++... .++.++.||++|.+++++++++  .++ +||+||||||....  ..
T Consensus       550 la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~~-~id~lVnnAGv~~~--~~  626 (795)
T 3slk_A          550 LVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEH-PLTAVVHAAGVLDD--GV  626 (795)
T ss_dssp             HHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS-CEEEEEECCCCCCC--CC
T ss_pred             HHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHhC-CCEEEEECCCcCCC--Cc
Confidence            55 78995 9999998   44566666666443 5899999999999999999999  444 89999999999887  88


Q ss_pred             cccCCHHHHHHhhheeec-----------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           74 TLDTDNEKVKRVMIMVVF-----------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        74 ~~~~~~~~~~~~~~~n~~-----------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +.+++.++|+..+++|+.           .-+||++||.++..+.+++..|+++|+    |+++|+.++.++||++|+|+
T Consensus       627 ~~~~t~e~~~~~~~~nv~G~~~l~~~~~~~l~iV~~SS~ag~~g~~g~~~YaAaka----~~~alA~~~~~~Gi~v~sI~  702 (795)
T 3slk_A          627 SESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGSGGQGNYAAANS----FLDALAQQRQSRGLPTRSLA  702 (795)
T ss_dssp             GGGCCHHHHHHHHCCCCCHHHHHHHHSCTTSEEEEEEETHHHHTCSSCHHHHHHHH----HHHHHHHHHHHTTCCEEEEE
T ss_pred             hhhCCHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEccHHhcCCCCCCHHHHHHHH----HHHHHHHHHHHcCCeEEEEE
Confidence            999999999999999999           227999999999999999999999995    66667777888899999999


Q ss_pred             cCcccCccc
Q 042200          143 HIVSATPFF  151 (181)
Q Consensus       143 Pg~v~t~~~  151 (181)
                      ||++.|++.
T Consensus       703 pG~v~t~g~  711 (795)
T 3slk_A          703 WGPWAEHGM  711 (795)
T ss_dssp             ECCCSCCCH
T ss_pred             CCeECcchh
Confidence            999998743

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=99.87  E-value=8.4e-22  Score=174.35  Aligned_cols=147  Identities=20%  Similarity=0.186  Sum_probs=121.8

Q ss_pred             cccCCCEEEEee-cchHHHHHHH----hHcCCC-CceEEEeeecCChhHHHHHHHh--cc---cC-CccEEEEcccccCC
Q 042200            2 FIQHRAKVIIAD-VQDDLCRALC----KEFDSD-ELISYVCCNVTIDSDVKNVFDF--TK---FG-KLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~-r~~~~~~~~~----~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~---~~-~id~vi~~ag~~~~   69 (181)
                      |+++|++|++++ |+.+.+.+..    +++... .++.++.||++|.+++.++++.  .+   +| ++|+||||||+...
T Consensus       673 LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~  752 (1878)
T 2uv9_A          673 LLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIYDTKNGLGWDLDYVVPFAAIPEN  752 (1878)
T ss_dssp             HHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHCSSSSCCCCCSEEEECCCCCCT
T ss_pred             HHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHhhcccCCCCcEEEeCcccccC
Confidence            688999999985 6666654443    334322 4789999999999999999998  56   78 89999999998765


Q ss_pred             CCC-CcccCC--HHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHH
Q 042200           70 MDR-TTLDTD--NEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        70 ~~~-~~~~~~--~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~l  127 (181)
                        . .+.+.+  .++|+.++++|+.                   .|+||++||.++..+  ++..|+++|+++++|++.+
T Consensus       753 --~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~~g--g~~aYaASKAAL~aLt~~l  828 (1878)
T 2uv9_A          753 --GREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGTFG--NDGLYSESKLALETLFNRW  828 (1878)
T ss_dssp             --TCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSSSS--CCSSHHHHHHHHTTHHHHH
T ss_pred             --CCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhccC--CchHHHHHHHHHHHHHHHH
Confidence              5 778888  7999999999998                   279999999988876  4778999999999999877


Q ss_pred             HHH-hcCCCeEEEEEecCccc-Ccccch
Q 042200          128 CVE-LGQYDIRVNSIAHIVSA-TPFFCN  153 (181)
Q Consensus       128 a~~-~~~~~i~v~~i~Pg~v~-t~~~~~  153 (181)
                      +.+ ++++ |+||+|+||++. |+|...
T Consensus       829 aAeEla~~-IrVNaVaPG~V~gT~m~~~  855 (1878)
T 2uv9_A          829 YSESWGNY-LTICGAVIGWTRGTGLMSA  855 (1878)
T ss_dssp             HHSTTTTT-EEEEEEEECCBCCTTSCSH
T ss_pred             HHHHcCCC-eEEEEEEecceecCccccc
Confidence            654 7776 999999999999 998643

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=99.86  E-value=7.7e-23  Score=176.97  Aligned_cols=146  Identities=18%  Similarity=0.143  Sum_probs=122.7

Q ss_pred             cccCCCEEEEe-ecchHHHHHHHhHcCC----C-CceEEEeeecCChhHHHHHHHh--cc-----cC-CccEEEEccccc
Q 042200            2 FIQHRAKVIIA-DVQDDLCRALCKEFDS----D-ELISYVCCNVTIDSDVKNVFDF--TK-----FG-KLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~-~r~~~~~~~~~~~~~~----~-~~~~~~~~D~~~~~~i~~~~~~--~~-----~~-~id~vi~~ag~~   67 (181)
                      |+++|++|+++ +|+.+.+++..+++..    . .++.++.||++|.+++++++++  .+     +| ++|+||||||+.
T Consensus       497 LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~  576 (1688)
T 2pff_A          497 LLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYDTEKNGGLGWDLDAIIPFAAIP  576 (1688)
T ss_dssp             HHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHSCTTSSSCCCCCCEEECCCCCC
T ss_pred             HHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHHhccccccCCCCeEEEECCCcC
Confidence            67899999998 5776666555555521    1 4789999999999999999998  55     66 899999999987


Q ss_pred             CCCCC-CcccCC--HHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHH-H
Q 042200           68 SNMDR-TTLDTD--NEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGL-M  124 (181)
Q Consensus        68 ~~~~~-~~~~~~--~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l-~  124 (181)
                      ..  . ++.+.+  .++|+.++++|+.                   .|+||++||.++..+  +...|++||+++++| .
T Consensus       577 ~~--g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~~G--g~saYaASKAAL~aLtt  652 (1688)
T 2pff_A          577 EQ--GIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGTFG--GDGMYSESKLSLETLFN  652 (1688)
T ss_dssp             CC--SBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTTSS--CBTTHHHHHHHHTHHHH
T ss_pred             CC--CCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhccC--CchHHHHHHHHHHHHHH
Confidence            65  5 777787  8999999999998                   279999999988876  678999999999999 7


Q ss_pred             HHHHHHhcCCCeEEEEEecCccc-Ccccc
Q 042200          125 KNLCVELGQYDIRVNSIAHIVSA-TPFFC  152 (181)
Q Consensus       125 ~~la~~~~~~~i~v~~i~Pg~v~-t~~~~  152 (181)
                      +.++.+++++ |+||+|+||++. |+|..
T Consensus       653 rsLAeEla~~-IRVNaVaPG~V~TT~M~~  680 (1688)
T 2pff_A          653 RWHSESWANQ-LTVCGAIIGWTRGTGLMS  680 (1688)
T ss_dssp             HTTTSSCTTT-EECCCCCCCCCCCCSSSC
T ss_pred             HHHHHHcCCC-eEEEEEEECcCcCCcccC
Confidence            8888888887 999999999999 78754

>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*

Probab=99.85  E-value=3e-21  Score=154.82  Aligned_cols=143  Identities=11%  Similarity=0.113  Sum_probs=120.1

Q ss_pred             cccCCC-EEEEeecch---HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEccccc-CCCCCCc
Q 042200            2 FIQHRA-KVIIADVQD---DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGII-SNMDRTT   74 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~-~~~~~~~   74 (181)
                      |+++|+ +|++++|+.   +..++..+++... .++.++.||++|.+++.+++++ ...+++|+||||||.. ..  ..+
T Consensus       259 La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g~ld~vVh~AGv~~~~--~~l  336 (496)
T 3mje_A          259 LAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDAPLTAVFHSAGVAHDD--APV  336 (496)
T ss_dssp             HHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTSCEEEEEECCCCCCSC--CCT
T ss_pred             HHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhCCCeEEEECCcccCCC--CCc
Confidence            678998 799999963   3344444544332 4899999999999999999998 3337899999999997 55  788


Q ss_pred             ccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           75 LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.+.++|+.++++|+.             .++||++||.++..+.+++..|+++|+++++|++.+    ..+||++++|
T Consensus       337 ~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~~g~~~YaAaKa~ldala~~~----~~~Gi~v~sV  412 (496)
T 3mje_A          337 ADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGSGGQPGYAAANAYLDALAEHR----RSLGLTASSV  412 (496)
T ss_dssp             TTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTCTTCHHHHHHHHHHHHHHHHH----HHTTCCCEEE
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCCCCcHHHHHHHHHHHHHHHHH----HhcCCeEEEE
Confidence            89999999999999998             579999999999999999999999999999888754    4569999999


Q ss_pred             ecCcccCcc
Q 042200          142 AHIVSATPF  150 (181)
Q Consensus       142 ~Pg~v~t~~  150 (181)
                      +||++.++.
T Consensus       413 ~pG~w~~~g  421 (496)
T 3mje_A          413 AWGTWGEVG  421 (496)
T ss_dssp             EECEESSSC
T ss_pred             ECCcccCCc
Confidence            999987653

>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*

Probab=99.80  E-value=2e-19  Score=144.40  Aligned_cols=142  Identities=15%  Similarity=0.173  Sum_probs=118.6

Q ss_pred             cccCCCE-EEEeecchH---HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAK-VIIADVQDD---LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~~---~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++ |++++|+..   ..++..+++... .++.++.||++|.+++.++++. ..++++|+||||||....  ..+.
T Consensus       246 La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g~ld~VIh~AG~~~~--~~l~  323 (486)
T 2fr1_A          246 LARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDD--GTVD  323 (486)
T ss_dssp             HHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCC--CCGG
T ss_pred             HHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcCCCcEEEECCccCCC--Cccc
Confidence            6778985 999999864   344444444322 4789999999999999999998 667899999999999876  7888


Q ss_pred             cCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           76 DTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +.+.+.++.++++|+.             .++||++||.++..+.+++..|+++|++++.|++.+    ..+|+++++|+
T Consensus       324 ~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~~g~~~Yaaaka~l~~la~~~----~~~gi~v~~i~  399 (486)
T 2fr1_A          324 TLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQR----RSDGLPATAVA  399 (486)
T ss_dssp             GCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHH----HHTTCCCEEEE
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCCCCCHHHHHHHHHHHHHHHHH----HhcCCeEEEEE
Confidence            8999999999999988             479999999999999999999999999999887654    34589999999


Q ss_pred             cCcccCc
Q 042200          143 HIVSATP  149 (181)
Q Consensus       143 Pg~v~t~  149 (181)
                      ||.+.++
T Consensus       400 pG~~~~~  406 (486)
T 2fr1_A          400 WGTWAGS  406 (486)
T ss_dssp             ECCBC--
T ss_pred             CCeeCCC
Confidence            9999876

>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}

Probab=99.79  E-value=7.3e-19  Score=141.75  Aligned_cols=142  Identities=13%  Similarity=0.129  Sum_probs=119.9

Q ss_pred             cccCCC-EEEEeecchH---HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRA-KVIIADVQDD---LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~---~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|+ +|++++|+..   .+++..+++... .++.++.||++|.+++.++++.   +++|+||||||....  ..+.+
T Consensus       279 La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~---~~ld~VVh~AGv~~~--~~~~~  353 (511)
T 2z5l_A          279 LAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTA---YPPNAVFHTAGILDD--AVIDT  353 (511)
T ss_dssp             HHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHH---SCCSEEEECCCCCCC--BCGGG
T ss_pred             HHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhc---CCCcEEEECCcccCC--ccccc
Confidence            678899 5999999863   345555555433 4799999999999999999985   679999999999876  78888


Q ss_pred             CCHHHHHHhhheeec--------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           77 TDNEKVKRVMIMVVF--------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .+.+.++.++++|+.              .++||++||.++..+.+++..|+++|++++.|++.+    ...|+++++|+
T Consensus       354 ~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~~g~~~YaaaKa~ld~la~~~----~~~gi~v~sv~  429 (511)
T 2z5l_A          354 LSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGNAGQGAYAAANAALDALAERR----RAAGLPATSVA  429 (511)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCCTTBHHHHHHHHHHHHHHHHH----HTTTCCCEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCCCCCHHHHHHHHHHHHHHHHH----HHcCCcEEEEE
Confidence            999999999999987              368999999999999999999999999999998865    35699999999


Q ss_pred             cCcc-cCcccc
Q 042200          143 HIVS-ATPFFC  152 (181)
Q Consensus       143 Pg~v-~t~~~~  152 (181)
                      ||++ .|+|..
T Consensus       430 pG~~~~tgm~~  440 (511)
T 2z5l_A          430 WGLWGGGGMAA  440 (511)
T ss_dssp             ECCBCSTTCCC
T ss_pred             CCcccCCcccc
Confidence            9999 677754

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=99.78  E-value=2.8e-20  Score=137.19  Aligned_cols=130  Identities=22%  Similarity=0.219  Sum_probs=105.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhccc-CCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKF-GKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~-~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.++++       .     .+.+|+++.+++++++++  + +++|+||||||....         .+
T Consensus        21 L~~~g~~V~~~~r~~~~~~-------~-----~~~~D~~~~~~~~~~~~~--~~~~~d~vi~~Ag~~~~---------~~   77 (255)
T 2dkn_A           21 LARAGHTVIGIDRGQADIE-------A-----DLSTPGGRETAVAAVLDR--CGGVLDGLVCCAGVGVT---------AA   77 (255)
T ss_dssp             HHHTTCEEEEEESSSSSEE-------C-----CTTSHHHHHHHHHHHHHH--HTTCCSEEEECCCCCTT---------SS
T ss_pred             HHhCCCEEEEEeCChhHcc-------c-----cccCCcccHHHHHHHHHH--cCCCccEEEECCCCCCc---------ch
Confidence            6789999999999864321       1     167899999999998884  3 689999999997642         11


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccC--------------------------ccchhhHhhH
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIG--------------------------EALYDYLMSK  117 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~--------------------------~~~~~y~~sK  117 (181)
                      .++..+++|+.                 .++||++||..+..+.                          ++...|+.+|
T Consensus        78 ~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK  157 (255)
T 2dkn_A           78 NSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLAGDEARAIELAEQQGQTHLAYAGSK  157 (255)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHHTCHHHHHHHHHHHCCHHHHHHHHH
T ss_pred             hHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcccchhhhhhhccccCCcchhHHHHH
Confidence            25666777765                 2789999998887654                          4667899999


Q ss_pred             HHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchh
Q 042200          118 YAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       118 ~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ++++.+++.++.++.++||++++++||.+.|++....
T Consensus       158 ~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~  194 (255)
T 2dkn_A          158 YAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQAS  194 (255)
T ss_dssp             HHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhc
Confidence            9999999999999988899999999999999987654

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=99.77  E-value=5.3e-19  Score=162.99  Aligned_cols=147  Identities=16%  Similarity=0.141  Sum_probs=106.8

Q ss_pred             CcccCCCEEEEeecchHH-----HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--c----ccCCccEEEEccccc-
Q 042200            1 VFIQHRAKVIIADVQDDL-----CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--T----KFGKLDIMFNNAGII-   67 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~----~~~~id~vi~~ag~~-   67 (181)
                      +|+++|++|++++|+.+.     ++++.+++... .++..+.+|+++.+++++++++  .    ++|++|+||||||+. 
T Consensus      2156 ~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d 2235 (3089)
T 3zen_D         2156 QLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPT 2235 (3089)
T ss_dssp             HHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCS
T ss_pred             HHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCccc
Confidence            378999999999998765     66677777554 5788999999999999999998  5    789999999999971 


Q ss_pred             ---CCCCCCcccCCHHHH----HHhhheeec-----------------c----eeEEEeccccccccCccchhhHhhHHH
Q 042200           68 ---SNMDRTTLDTDNEKV----KRVMIMVVF-----------------L----GVLLFTANLATETIGEALYDYLMSKYA  119 (181)
Q Consensus        68 ---~~~~~~~~~~~~~~~----~~~~~~n~~-----------------~----~~iv~iss~~~~~~~~~~~~y~~sK~a  119 (181)
                         ... ....+.+.++|    +..+++|+.                 .    +.++..++..+  ..++...|++||+|
T Consensus      2236 ~~~~~a-~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~ss~~g--~~g~~~aYsASKaA 2312 (3089)
T 3zen_D         2236 LLFPFA-APRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGSPNRG--MFGGDGAYGEAKSA 2312 (3089)
T ss_dssp             EEEECC-CCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEECSSTT--SCSSCSSHHHHGGG
T ss_pred             ccCccc-ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECCcccc--cCCCchHHHHHHHH
Confidence               110 12222233333    333666665                 1    22333333222  23345689999999


Q ss_pred             HHHHHHHHHHH--hcCCCeEEEEEecCccc-Cccc
Q 042200          120 VLGLMKNLCVE--LGQYDIRVNSIAHIVSA-TPFF  151 (181)
Q Consensus       120 ~~~l~~~la~~--~~~~~i~v~~i~Pg~v~-t~~~  151 (181)
                      +.+|+++|+.|  +++ +|+||+++||+|. |++.
T Consensus      2313 l~~LtrslA~E~~~a~-~IrVn~v~PG~v~tT~l~ 2346 (3089)
T 3zen_D         2313 LDALENRWSAEKSWAE-RVSLAHALIGWTKGTGLM 2346 (3089)
T ss_dssp             HHHHHHHHHHCSTTTT-TEEEEEEECCCEECSTTT
T ss_pred             HHHHHHHHHhccccCC-CeEEEEEeecccCCCccc
Confidence            99999999999  665 6999999999999 6654

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=99.70  E-value=2.8e-17  Score=122.41  Aligned_cols=125  Identities=11%  Similarity=0.005  Sum_probs=100.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+..+..      .  .++.++.+|++|.+++.++++     ++|+||||||....          +
T Consensus        22 ~L~~~G~~V~~~~r~~~~~~------~--~~~~~~~~Dl~d~~~~~~~~~-----~~D~vi~~Ag~~~~----------~   78 (267)
T 3rft_A           22 RLAPMAEILRLADLSPLDPA------G--PNEECVQCDLADANAVNAMVA-----GCDGIVHLGGISVE----------K   78 (267)
T ss_dssp             HTGGGEEEEEEEESSCCCCC------C--TTEEEEECCTTCHHHHHHHHT-----TCSEEEECCSCCSC----------C
T ss_pred             HHHhcCCEEEEEecCCcccc------C--CCCEEEEcCCCCHHHHHHHHc-----CCCEEEECCCCcCc----------C
Confidence            37889999999999864332      1  378999999999999999988     48999999997432          2


Q ss_pred             HHHHhhheeec-------------ceeEEEecccccc------------ccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           81 KVKRVMIMVVF-------------LGVLLFTANLATE------------TIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        81 ~~~~~~~~n~~-------------~~~iv~iss~~~~------------~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .|+..+++|+.             .++||++||..++            .+.++...|+.+|.+++.+++.++.++   |
T Consensus        79 ~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~a~~~---g  155 (267)
T 3rft_A           79 PFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYGVSKCFGENLARMYFDKF---G  155 (267)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---C
Confidence            35667777776             4799999998776            233556789999999999999999887   7


Q ss_pred             eEEEEEecCcccCccc
Q 042200          136 IRVNSIAHIVSATPFF  151 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~  151 (181)
                      ++++.|+||.+.+++.
T Consensus       156 ~~~~~vr~~~v~~~~~  171 (267)
T 3rft_A          156 QETALVRIGSCTPEPN  171 (267)
T ss_dssp             CCEEEEEECBCSSSCC
T ss_pred             CeEEEEEeecccCCCC
Confidence            8888999988887653

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=99.63  E-value=1e-15  Score=117.99  Aligned_cols=134  Identities=10%  Similarity=0.073  Sum_probs=106.2

Q ss_pred             cccC-CC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH-RA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~-G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++ |+ +|++++|+..+.......+.. .++.++.+|++|.+++.++++     ++|+|||+||....  . .   ..
T Consensus        41 L~~~~g~~~V~~~~r~~~~~~~~~~~~~~-~~v~~~~~Dl~d~~~l~~~~~-----~~D~Vih~Aa~~~~--~-~---~~  108 (344)
T 2gn4_A           41 VLDTTNAKKIIVYSRDELKQSEMAMEFND-PRMRFFIGDVRDLERLNYALE-----GVDICIHAAALKHV--P-I---AE  108 (344)
T ss_dssp             HHHHCCCSEEEEEESCHHHHHHHHHHHCC-TTEEEEECCTTCHHHHHHHTT-----TCSEEEECCCCCCH--H-H---HH
T ss_pred             HHhhCCCCEEEEEECChhhHHHHHHHhcC-CCEEEEECCCCCHHHHHHHHh-----cCCEEEECCCCCCC--C-c---hh
Confidence            5677 97 999999998887777666643 378999999999999988887     48999999997542  1 1   11


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcc
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS  146 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v  146 (181)
                      ......+++|+.             .+++|++||..+..   +...|+.+|++++.+++.++.++++.|+++++++||.+
T Consensus       109 ~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~~---p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v  185 (344)
T 2gn4_A          109 YNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAAN---PINLYGATKLCSDKLFVSANNFKGSSQTQFSVVRYGNV  185 (344)
T ss_dssp             HSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSS---CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEECCCEE
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccCC---CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEEeccE
Confidence            223455666655             46899999976554   35789999999999999999988888999999999999


Q ss_pred             cCcc
Q 042200          147 ATPF  150 (181)
Q Consensus       147 ~t~~  150 (181)
                      .++.
T Consensus       186 ~g~~  189 (344)
T 2gn4_A          186 VGSR  189 (344)
T ss_dssp             TTCT
T ss_pred             ECCC
Confidence            9864

>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2

Probab=99.62  E-value=1.3e-15  Score=116.90  Aligned_cols=138  Identities=13%  Similarity=-0.007  Sum_probs=101.6

Q ss_pred             cccCCCEEEEeecch-HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+. .........+....++.++.+|++|.+++.++++.   .++|+|||+||....      ..+.+
T Consensus        21 L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~------~~~~~   91 (347)
T 1orr_A           21 ALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK---YMPDSCFHLAGQVAM------TTSID   91 (347)
T ss_dssp             HHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH---HCCSEEEECCCCCCH------HHHHH
T ss_pred             HHhCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHHHhc---cCCCEEEECCcccCh------hhhhh
Confidence            678899999999852 22222222222223588999999999999999884   358999999996432      12234


Q ss_pred             HHHHhhheeec--------------ceeEEEeccccccc---------------------------cCccchhhHhhHHH
Q 042200           81 KVKRVMIMVVF--------------LGVLLFTANLATET---------------------------IGEALYDYLMSKYA  119 (181)
Q Consensus        81 ~~~~~~~~n~~--------------~~~iv~iss~~~~~---------------------------~~~~~~~y~~sK~a  119 (181)
                      +++..+++|+.              .++||++||.+.+.                           +..+...|+.+|.+
T Consensus        92 ~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~  171 (347)
T 1orr_A           92 NPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGA  171 (347)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccccccccCccccCCCCCCCchHHHHHH
Confidence            45666666665              25899999976532                           12356789999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          120 VLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       120 ~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+.+++.++.++   |++++.++||.+.++..
T Consensus       172 ~E~~~~~~~~~~---gi~~~ilrp~~v~g~~~  200 (347)
T 1orr_A          172 ADQYMLDYARIF---GLNTVVFRHSSMYGGRQ  200 (347)
T ss_dssp             HHHHHHHHHHHH---CCEEEEEEECCEECTTC
T ss_pred             HHHHHHHHHHHh---CCcEEEEccCceeCcCC
Confidence            999999999887   79999999999999864

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.62  E-value=6.7e-16  Score=142.36  Aligned_cols=139  Identities=9%  Similarity=0.063  Sum_probs=99.0

Q ss_pred             cccCCCE-EEEeecchH---HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAK-VIIADVQDD---LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~-Vv~~~r~~~---~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++ |++++|+..   ...+..+++... .++.++.||++|.+++++++++ .+++++|+||||||....  ..+.
T Consensus      1904 la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g~id~lVnnAgv~~~--~~~~ 1981 (2512)
T 2vz8_A         1904 LRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLGPVGGVFNLAMVLRD--AVLE 1981 (2512)
T ss_dssp             HHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHSCEEEEEECCCC---------
T ss_pred             HHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcCCCcEEEECCCcCCC--Cchh
Confidence            6789997 888899743   233444444322 4788999999999999999998 667899999999998766  7888


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +++.++|+..+++|+.               .++||++||.++..+.+++..|+++|+++++|++.++.+    |++..+
T Consensus      1982 ~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~~g~~~Y~aaKaal~~l~~~rr~~----Gl~~~a 2057 (2512)
T 2vz8_A         1982 NQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGNAGQANYGFANSAMERICEKRRHD----GLPGLA 2057 (2512)
T ss_dssp             ---------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTCTTCHHHHHHHHHHHHHHHHHHHT----TSCCCE
T ss_pred             hCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCCCCcHHHHHHHHHHHHHHHHHHHC----CCcEEE
Confidence            8999999999999998               479999999999999999999999999999999966543    455555


Q ss_pred             EecCcc
Q 042200          141 IAHIVS  146 (181)
Q Consensus       141 i~Pg~v  146 (181)
                      +..|.+
T Consensus      2058 ~~~g~~ 2063 (2512)
T 2vz8_A         2058 VQWGAI 2063 (2512)
T ss_dssp             EEECCB
T ss_pred             EEccCc
Confidence            555443

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=99.61  E-value=5.6e-16  Score=118.78  Aligned_cols=139  Identities=12%  Similarity=0.113  Sum_probs=100.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|++++|+.....+..+.+..  ...+.++.+|++|.+++.++++.   +++|+||||||....  ....+.+ 
T Consensus        25 L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~--~~~~~~~-   98 (341)
T 3enk_A           25 LLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPITAAIHFAALKAV--GESVAKP-   98 (341)
T ss_dssp             HHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCCEEEECCCCCCH--HHHHHCH-
T ss_pred             HHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCcEEEECcccccc--CccccCh-
Confidence            678999999999975443333332211  12688999999999999999985   569999999997643  2222222 


Q ss_pred             HHHHHhhheeec-------------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                         ...++.|+.             .++||++||...+..           ..+...|+.+|.+.+.+++.++.++.  +
T Consensus        99 ---~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~--~  173 (341)
T 3enk_A           99 ---IEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSATNPYGQTKLMAEQILRDVEAADP--S  173 (341)
T ss_dssp             ---HHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHCT--T
T ss_pred             ---HHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHhhcCC--C
Confidence               233333433             468999999765421           22446899999999999999998875  5


Q ss_pred             eEEEEEecCcccCccc
Q 042200          136 IRVNSIAHIVSATPFF  151 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~  151 (181)
                      ++++.++|+.+.++..
T Consensus       174 ~~~~~lRp~~v~G~~~  189 (341)
T 3enk_A          174 WRVATLRYFNPVGAHE  189 (341)
T ss_dssp             CEEEEEEECEEECCCT
T ss_pred             ceEEEEeeccccCCcc
Confidence            9999999999988743

>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*

Probab=99.59  E-value=1.8e-15  Score=116.72  Aligned_cols=140  Identities=9%  Similarity=-0.100  Sum_probs=104.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+........+....++.++.+|+++.+++.++++.   -++|+|||+||....      ..+.++
T Consensus        29 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~------~~~~~~   99 (357)
T 1rkx_A           29 LQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE---FQPEIVFHMAAQPLV------RLSYSE   99 (357)
T ss_dssp             HHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH------HHHHHC
T ss_pred             HHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHh---cCCCEEEECCCCccc------ccchhC
Confidence            67889999999998654433333332123688999999999999999884   158999999995321      123344


Q ss_pred             HHHhhheeec--------------ceeEEEeccccccc------------cCccchhhHhhHHHHHHHHHHHHHHhc---
Q 042200           82 VKRVMIMVVF--------------LGVLLFTANLATET------------IGEALYDYLMSKYAVLGLMKNLCVELG---  132 (181)
Q Consensus        82 ~~~~~~~n~~--------------~~~iv~iss~~~~~------------~~~~~~~y~~sK~a~~~l~~~la~~~~---  132 (181)
                      +...+++|+.              .++||++||...+.            +..+...|+.+|.+++.+++.++.++.   
T Consensus       100 ~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~  179 (357)
T 1rkx_A          100 PVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPA  179 (357)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHhhhh
Confidence            5566666665              24899999976432            223567899999999999999999885   


Q ss_pred             ---CCCeEEEEEecCcccCcc
Q 042200          133 ---QYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       133 ---~~~i~v~~i~Pg~v~t~~  150 (181)
                         +.|++++.++||.+.++.
T Consensus       180 ~~~~~gi~~~~lrp~~v~G~~  200 (357)
T 1rkx_A          180 NYGQHGTAVATVRAGNVIGGG  200 (357)
T ss_dssp             GHHHHCCEEEEEECCCEECTT
T ss_pred             ccccCCceEEEEeeceeeCCC
Confidence               448999999999999874

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=99.58  E-value=5.5e-15  Score=113.05  Aligned_cols=136  Identities=14%  Similarity=0.089  Sum_probs=101.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCC--CCceEEE-eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDS--DELISYV-CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~--~~~~~~~-~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|++++|+.++.+.....+..  ..++.++ .+|++|.+++.++++     ++|+||||||....  .    . 
T Consensus        31 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-----~~d~vih~A~~~~~--~----~-   98 (342)
T 1y1p_A           31 LLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----GAAGVAHIASVVSF--S----N-   98 (342)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----TCSEEEECCCCCSC--C----S-
T ss_pred             HHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHc-----CCCEEEEeCCCCCC--C----C-
Confidence            678899999999998766554443310  0268888 899999988777765     48999999997643  2    1 


Q ss_pred             HHHHHHhhheeec--------------ceeEEEeccccccc-cC------------------------------ccchhh
Q 042200           79 NEKVKRVMIMVVF--------------LGVLLFTANLATET-IG------------------------------EALYDY  113 (181)
Q Consensus        79 ~~~~~~~~~~n~~--------------~~~iv~iss~~~~~-~~------------------------------~~~~~y  113 (181)
                        ++...+++|+.              .+++|++||..++. +.                              .+...|
T Consensus        99 --~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~~~Y  176 (342)
T 1y1p_A           99 --KYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVY  176 (342)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHH
T ss_pred             --CHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCchhhhhhccccccccccchHHH
Confidence              12334444443              36899999987652 11                              134679


Q ss_pred             HhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccc
Q 042200          114 LMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       114 ~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      +.+|.+.+.+++.++.+++. +++++.++|+.+.++...
T Consensus       177 ~~sK~~~e~~~~~~~~~~~~-~~~~~~~rp~~v~g~~~~  214 (342)
T 1y1p_A          177 AASKTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIFD  214 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCSC
T ss_pred             HHHHHHHHHHHHHHHHhcCC-CceEEEEcCCceECCCCC
Confidence            99999999999999999876 899999999999998643

>4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A

Probab=99.58  E-value=4.6e-14  Score=108.77  Aligned_cols=150  Identities=12%  Similarity=-0.057  Sum_probs=107.5

Q ss_pred             cCCCEEEEeecchHH------------HHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccC
Q 042200            4 QHRAKVIIADVQDDL------------CRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~------------~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~   68 (181)
                      +.|+.|+++.+..+.            ...+.+.+... .....+.||+++.+++++++++  .++|+||+||||+|...
T Consensus        73 ~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~  152 (401)
T 4ggo_A           73 GYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPV  152 (401)
T ss_dssp             HHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSE
T ss_pred             hCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEeccccc
Confidence            578999988875321            12222222222 4899999999999999999999  78899999999999753


Q ss_pred             CCC-----------CC---------------------cccCCHHHHHHhhh---eeec---------------ceeEEEe
Q 042200           69 NMD-----------RT---------------------TLDTDNEKVKRVMI---MVVF---------------LGVLLFT   98 (181)
Q Consensus        69 ~~~-----------~~---------------------~~~~~~~~~~~~~~---~n~~---------------~~~iv~i   98 (181)
                      ...           ++                     +...+.++++.++.   ...+               +++++.+
T Consensus       153 r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat~eeie~T~~vMg~s~~s~w~~al~~a~lla~G~siva~  232 (401)
T 4ggo_A          153 RTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPANDEEAAATVKVMGGEDWERWIKQLSKEGLLEEGCITLAY  232 (401)
T ss_dssp             EECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred             ccCCCCCceeeeeecccccccccccccccccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEE
Confidence            100           00                     01123344443332   2221               7899999


Q ss_pred             ccccccccCccc--hhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhc
Q 042200           99 ANLATETIGEAL--YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM  155 (181)
Q Consensus        99 ss~~~~~~~~~~--~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~  155 (181)
                      |+.++....|.+  ..++.+|++|+..++.|+.+++  ++++++++|+.+.|......+
T Consensus       233 SYiGse~t~P~Y~~G~mG~AKaaLEa~~r~La~eL~--~~~a~v~v~~a~vT~AssaIP  289 (401)
T 4ggo_A          233 SYIGPEATQALYRKGTIGKAKEHLEATAHRLNKENP--SIRAFVSVNKGLVTRASAVIP  289 (401)
T ss_dssp             ECCCCGGGHHHHTTSHHHHHHHHHHHHHHHHHHHCT--TEEEEEEECCCCCCTTGGGSS
T ss_pred             eccCcceeecCCCccHHHHHHHHHHHHHHHHHHhcC--CCcEEEEEcCccccchhhcCC
Confidence            998887666644  3789999999999999999998  589999999999998765554

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=99.58  E-value=2.3e-16  Score=115.49  Aligned_cols=122  Identities=11%  Similarity=0.048  Sum_probs=92.0

Q ss_pred             cccCCC--EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRA--KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|+  +|++++|+.+.+.....     ..+.++.+|++|.+++.++++     ++|+||||||....         .
T Consensus        38 L~~~G~~~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~ag~~~~---------~   98 (242)
T 2bka_A           38 ILEQGLFSKVTLIGRRKLTFDEEAY-----KNVNQEVVDFEKLDDYASAFQ-----GHDVGFCCLGTTRG---------K   98 (242)
T ss_dssp             HHHHTCCSEEEEEESSCCCCCSGGG-----GGCEEEECCGGGGGGGGGGGS-----SCSEEEECCCCCHH---------H
T ss_pred             HHcCCCCCEEEEEEcCCCCcccccc-----CCceEEecCcCCHHHHHHHhc-----CCCEEEECCCcccc---------c
Confidence            678899  99999998654322111     257889999999998887776     48999999996432         1


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe-EEEEEecCc
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI-RVNSIAHIV  145 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i-~v~~i~Pg~  145 (181)
                      ..++..+++|+.             .++||++||..+..  ++...|+.+|++++.+++.+       ++ +++.|+||.
T Consensus        99 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~--~~~~~Y~~sK~~~e~~~~~~-------~~~~~~~vrpg~  169 (242)
T 2bka_A           99 AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEEL-------KFDRYSVFRPGV  169 (242)
T ss_dssp             HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHTT-------CCSEEEEEECCE
T ss_pred             CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCC--CCcchHHHHHHHHHHHHHhc-------CCCCeEEEcCce
Confidence            234556666665             46999999987654  34568999999999988753       45 799999999


Q ss_pred             ccCccc
Q 042200          146 SATPFF  151 (181)
Q Consensus       146 v~t~~~  151 (181)
                      +.|++.
T Consensus       170 v~~~~~  175 (242)
T 2bka_A          170 LLCDRQ  175 (242)
T ss_dssp             EECTTG
T ss_pred             ecCCCC
Confidence            999864

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=99.57  E-value=1.5e-14  Score=105.53  Aligned_cols=121  Identities=11%  Similarity=0.137  Sum_probs=93.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCce-EEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELI-SYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~-~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.++++.....     .+ .++.+|++  +++.+     .++++|+||||||....          +
T Consensus        41 L~~~G~~V~~~~R~~~~~~~~~~~-----~~~~~~~~Dl~--~~~~~-----~~~~~D~vi~~ag~~~~----------~   98 (236)
T 3e8x_A           41 LKNKGHEPVAMVRNEEQGPELRER-----GASDIVVANLE--EDFSH-----AFASIDAVVFAAGSGPH----------T   98 (236)
T ss_dssp             HHHTTCEEEEEESSGGGHHHHHHT-----TCSEEEECCTT--SCCGG-----GGTTCSEEEECCCCCTT----------S
T ss_pred             HHhCCCeEEEEECChHHHHHHHhC-----CCceEEEcccH--HHHHH-----HHcCCCEEEECCCCCCC----------C
Confidence            678999999999998877665431     57 89999999  33322     34579999999997532          2


Q ss_pred             HHHHhhheeec-------------ceeEEEeccccccccC---ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecC
Q 042200           81 KVKRVMIMVVF-------------LGVLLFTANLATETIG---EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI  144 (181)
Q Consensus        81 ~~~~~~~~n~~-------------~~~iv~iss~~~~~~~---~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg  144 (181)
                      +++..+++|+.             .++||++||..+..+.   ++...|+.+|++++.+++       ..|++++.|+||
T Consensus        99 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~~Y~~sK~~~e~~~~-------~~gi~~~~lrpg  171 (236)
T 3e8x_A           99 GADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDPDQGPMNMRHYLVAKRLADDELK-------RSSLDYTIVRPG  171 (236)
T ss_dssp             CHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCGGGSCGGGHHHHHHHHHHHHHHH-------HSSSEEEEEEEC
T ss_pred             CccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCChhhhhhHHHHHHHHHHHHH-------HCCCCEEEEeCC
Confidence            35566666665             4799999997776654   567899999999998876       458999999999


Q ss_pred             cccCccc
Q 042200          145 VSATPFF  151 (181)
Q Consensus       145 ~v~t~~~  151 (181)
                      .+.++..
T Consensus       172 ~v~~~~~  178 (236)
T 3e8x_A          172 PLSNEES  178 (236)
T ss_dssp             SEECSCC
T ss_pred             cccCCCC
Confidence            9999854

>2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus}

Probab=99.56  E-value=4.7e-15  Score=112.69  Aligned_cols=129  Identities=15%  Similarity=0.075  Sum_probs=99.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+... +.    +    ++.++.+|++|.+++.++++.   +++|+|||+||....  .    .+.++
T Consensus        32 L~~~G~~V~~~~r~~~~-~~----l----~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~--~----~~~~~   93 (321)
T 2pk3_A           32 LTEQNVEVFGTSRNNEA-KL----P----NVEMISLDIMDSQRVKKVISD---IKPDYIFHLAAKSSV--K----DSWLN   93 (321)
T ss_dssp             HHHTTCEEEEEESCTTC-CC----T----TEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--H----HHTTC
T ss_pred             HHHCCCEEEEEecCCcc-cc----c----eeeEEECCCCCHHHHHHHHHh---cCCCEEEEcCcccch--h----hhhhc
Confidence            67889999999998653 21    2    478899999999999999884   468999999997542  1    11223


Q ss_pred             HHHhhheeec--------------ceeEEEeccccccccC-------------ccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           82 VKRVMIMVVF--------------LGVLLFTANLATETIG-------------EALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        82 ~~~~~~~n~~--------------~~~iv~iss~~~~~~~-------------~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +...+++|+.              .++||++||.+.+...             ++...|+.+|.+++.+++.++.++   
T Consensus        94 ~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---  170 (321)
T 2pk3_A           94 KKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQLRPMSPYGVSKASVGMLARQYVKAY---  170 (321)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCCBCCSHHHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHc---
Confidence            4555555554              3689999998655322             456789999999999999999886   


Q ss_pred             CeEEEEEecCcccCccc
Q 042200          135 DIRVNSIAHIVSATPFF  151 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~  151 (181)
                      |++++.++|+.+.++..
T Consensus       171 gi~~~ilrp~~v~g~~~  187 (321)
T 2pk3_A          171 GMDIIHTRTFNHIGPGQ  187 (321)
T ss_dssp             CCEEEEEEECEEECTTC
T ss_pred             CCCEEEEEeCcccCcCC
Confidence            89999999999998864

>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*

Probab=99.56  E-value=3.5e-14  Score=111.09  Aligned_cols=139  Identities=13%  Similarity=-0.066  Sum_probs=101.4

Q ss_pred             cccCCCEEEEeecchHHHH--------------------HHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEE
Q 042200            2 FIQHRAKVIIADVQDDLCR--------------------ALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF   61 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~--------------------~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi   61 (181)
                      |+++|++|++++|+.....                    .......  .++.++.+|+++.+++.++++.   .++|+||
T Consensus        31 L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~v~~~~~Dl~d~~~~~~~~~~---~~~D~Vi  105 (404)
T 1i24_A           31 LSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDICDFEFLAESFKS---FEPDSVV  105 (404)
T ss_dssp             HHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTTSHHHHHHHHHH---HCCSEEE
T ss_pred             HHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC--CceEEEECCCCCHHHHHHHHhc---cCCCEEE
Confidence            6789999999998643321                    1111112  2688999999999999999884   1589999


Q ss_pred             EcccccCCCCCCcccCCHHHHHHhhheeec-------------c-eeEEEeccccccc----------------------
Q 042200           62 NNAGIISNMDRTTLDTDNEKVKRVMIMVVF-------------L-GVLLFTANLATET----------------------  105 (181)
Q Consensus        62 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-------------~-~~iv~iss~~~~~----------------------  105 (181)
                      ||||....  . ......+.+...+++|+.             . ++||++||.+.+.                      
T Consensus       106 h~A~~~~~--~-~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~E~~~~~~~~~~~~~~  182 (404)
T 1i24_A          106 HFGEQRSA--P-YSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTL  182 (404)
T ss_dssp             ECCSCCCH--H-HHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEEE
T ss_pred             ECCCCCCc--c-chhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHHhCCCCCCCCccccccccccccccc
Confidence            99997542  1 112245555666666666             2 4899999975442                      


Q ss_pred             --cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          106 --IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       106 --~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                        +..+...|+.+|.+++.+++.++.++   |+++++++||.+.+|..
T Consensus       183 ~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---gi~~~ivrp~~v~Gp~~  227 (404)
T 1i24_A          183 PYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVKT  227 (404)
T ss_dssp             ECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSCC
T ss_pred             cCCCCCCChhHHHHHHHHHHHHHHHHhc---CCeEEEEecceeeCCCC
Confidence              22345679999999999999998887   89999999999998853

>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*

Probab=99.55  E-value=3.6e-14  Score=110.84  Aligned_cols=138  Identities=12%  Similarity=0.081  Sum_probs=101.0

Q ss_pred             cc-cCCCEEEEeecchHH------------HHHHHhHcCCC---Cc---eEEEeeecCChhHHHHHHHhcccCCccEEEE
Q 042200            2 FI-QHRAKVIIADVQDDL------------CRALCKEFDSD---EL---ISYVCCNVTIDSDVKNVFDFTKFGKLDIMFN   62 (181)
Q Consensus         2 l~-~~G~~Vv~~~r~~~~------------~~~~~~~~~~~---~~---~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~   62 (181)
                      |+ ++|++|++++|+...            +.+.++++...   .+   +.++.+|+++.+++.++++.  ++++|+|||
T Consensus        22 L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~--~~~~d~vih   99 (397)
T 1gy8_A           22 LLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFLNGVFTR--HGPIDAVVH   99 (397)
T ss_dssp             HHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHHHHHHHH--SCCCCEEEE
T ss_pred             HHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHHHHHHHh--cCCCCEEEE
Confidence            56 889999999987433            22223333221   13   88999999999999998884  455999999


Q ss_pred             cccccCCCCCCcccCCHHHHHHhhheeec-------------ceeEEEeccccccccCc------------------cch
Q 042200           63 NAGIISNMDRTTLDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGE------------------ALY  111 (181)
Q Consensus        63 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~------------------~~~  111 (181)
                      |||....  .    .+.+++...+++|+.             .++||++||.+.+....                  +..
T Consensus       100 ~A~~~~~--~----~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~E~~~~~p~~  173 (397)
T 1gy8_A          100 MCAFLAV--G----ESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSVSTNAEPIDINAKKSPES  173 (397)
T ss_dssp             CCCCCCH--H----HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC-----CCCCBCTTSCCBCSS
T ss_pred             CCCccCc--C----cchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCcccccccccCcCccCCCCCCC
Confidence            9997542  1    123445566666665             36899999965432211                  257


Q ss_pred             hhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          112 DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       112 ~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .|+.+|.+++.+++.++.++   |+++++++|+.+.++.
T Consensus       174 ~Y~~sK~~~e~~~~~~~~~~---gi~~~ilRp~~v~G~~  209 (397)
T 1gy8_A          174 PYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (397)
T ss_dssp             HHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             chHHHHHHHHHHHHHHHHHH---CCcEEEEeccceeCCC
Confidence            89999999999999999988   8999999999998774

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=99.53  E-value=2.7e-14  Score=109.95  Aligned_cols=136  Identities=10%  Similarity=0.008  Sum_probs=102.4

Q ss_pred             cccCCCEEEEeecch----HHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQD----DLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~----~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+.    +.+....+.+...  .++.++.+|++|.+++.++++     ++|+|||+||....  .   
T Consensus        47 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A~~~~~--~---  116 (352)
T 1sb8_A           47 LLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-----GVDYVLHQAALGSV--P---  116 (352)
T ss_dssp             HHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-----TCSEEEECCSCCCH--H---
T ss_pred             HHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-----CCCEEEECCcccCc--h---
Confidence            678899999999964    3444444333210  368899999999999988887     48999999997532  1   


Q ss_pred             cCCHHHHHHhhheeec-------------ceeEEEeccccccccCc-----------cchhhHhhHHHHHHHHHHHHHHh
Q 042200           76 DTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGE-----------ALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~-----------~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                       .+.+++...+++|+.             .+++|++||...+.+.+           +...|+.+|.+.+.+++.++.++
T Consensus       117 -~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~  195 (352)
T 1sb8_A          117 -RSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCY  195 (352)
T ss_dssp             -HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             -hhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc
Confidence             123445566666665             36899999987654332           35689999999999999999887


Q ss_pred             cCCCeEEEEEecCcccCccc
Q 042200          132 GQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~  151 (181)
                         |++++.++||.+.++..
T Consensus       196 ---g~~~~ilRp~~v~G~~~  212 (352)
T 1sb8_A          196 ---GFSTIGLRYFNVFGRRQ  212 (352)
T ss_dssp             ---CCCCEEEEECCEECTTC
T ss_pred             ---CCCEEEEEECceeCcCC
Confidence               79999999999998853

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=99.53  E-value=2.8e-14  Score=102.94  Aligned_cols=130  Identities=10%  Similarity=0.060  Sum_probs=97.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCC-hhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTI-DSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|++++|+.++.+..       ..+.++.+|++| .+++.++++     ++|+||||||....   ...+...
T Consensus        19 ~L~~~g~~V~~~~R~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~~-----~~d~vi~~ag~~~~---~~~~~n~   83 (219)
T 3dqp_A           19 SLSTTDYQIYAGARKVEQVPQY-------NNVKAVHFDVDWTPEEMAKQLH-----GMDAIINVSGSGGK---SLLKVDL   83 (219)
T ss_dssp             HHTTSSCEEEEEESSGGGSCCC-------TTEEEEECCTTSCHHHHHTTTT-----TCSEEEECCCCTTS---SCCCCCC
T ss_pred             HHHHCCCEEEEEECCccchhhc-------CCceEEEecccCCHHHHHHHHc-----CCCEEEECCcCCCC---CcEeEeH
Confidence            3678999999999987654321       268999999999 998888877     48999999998653   2333333


Q ss_pred             HHHHHhhheeec--ceeEEEeccccccccCcc-------chhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           80 EKVKRVMIMVVF--LGVLLFTANLATETIGEA-------LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        80 ~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~-------~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ......++.-..  .+++|++||..+..+.+.       ...|+.+|.+++.+++      ...|++++.++||.+.++.
T Consensus        84 ~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e~~~~~~~~Y~~sK~~~e~~~~------~~~~i~~~ilrp~~v~g~~  157 (219)
T 3dqp_A           84 YGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLT------KETNLDYTIIQPGALTEEE  157 (219)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCSHHHHHTHHHHHHHHHHHHHHH------HSCCCEEEEEEECSEECSC
T ss_pred             HHHHHHHHHHHHhCCCEEEEECcccccCCCcccccccccccHHHHHHHHHHHHHH------hccCCcEEEEeCceEecCC
Confidence            333333322222  368999999887766554       6789999999998886      3568999999999998874


Q ss_pred             c
Q 042200          151 F  151 (181)
Q Consensus       151 ~  151 (181)
                      .
T Consensus       158 ~  158 (219)
T 3dqp_A          158 A  158 (219)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*

Probab=99.52  E-value=1.1e-14  Score=111.45  Aligned_cols=140  Identities=11%  Similarity=-0.051  Sum_probs=99.9

Q ss_pred             cccCCCEEEEeecchHHHH-HHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCR-ALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.+... .....+....++.++.+|++|.+++.++++.   -++|+||||||....      +.+.+
T Consensus        23 L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~------~~~~~   93 (345)
T 2z1m_A           23 LLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEK---VQPDEVYNLAAQSFV------GVSFE   93 (345)
T ss_dssp             HHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHH---HCCSEEEECCCCCCH------HHHTT
T ss_pred             HHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHh---cCCCEEEECCCCcch------hhhhh
Confidence            6788999999999864332 1223332223688999999999999999884   158999999996532      12233


Q ss_pred             HHHHhhheeec------------c--eeEEEecccccc-----------ccCccchhhHhhHHHHHHHHHHHHHHhc---
Q 042200           81 KVKRVMIMVVF------------L--GVLLFTANLATE-----------TIGEALYDYLMSKYAVLGLMKNLCVELG---  132 (181)
Q Consensus        81 ~~~~~~~~n~~------------~--~~iv~iss~~~~-----------~~~~~~~~y~~sK~a~~~l~~~la~~~~---  132 (181)
                      +++..+++|+.            +  ++||++||...+           .+..+...|+.+|.+++.+++.++.++.   
T Consensus        94 ~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~  173 (345)
T 2z1m_A           94 QPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPRSPYAVAKLFGHWITVNYREAYNMFA  173 (345)
T ss_dssp             SHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHHHHHhCCce
Confidence            45566666665            2  799999997543           2234567899999999999999999875   


Q ss_pred             CCCeEEEEEecCcccCcc
Q 042200          133 QYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~  150 (181)
                      ..++.++.+.||...|.+
T Consensus       174 ~~~r~~~~~gpg~~~~~~  191 (345)
T 2z1m_A          174 CSGILFNHESPLRGIEFV  191 (345)
T ss_dssp             EEEEECCEECTTSCTTSH
T ss_pred             EeeeeeeecCCCCCCcch
Confidence            334567777888777654

>2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii}

Probab=99.52  E-value=1.7e-14  Score=110.26  Aligned_cols=135  Identities=14%  Similarity=0.022  Sum_probs=97.7

Q ss_pred             cccCC--CEEEEeecchH--HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHR--AKVIIADVQDD--LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|  ++|++++|+..  ..+. ...+....++.++.+|++|.+++.+++.     ++|+|||+||....      +.
T Consensus        23 L~~~g~~~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A~~~~~------~~   90 (336)
T 2hun_A           23 ILEKHPDWEVINIDKLGYGSNPAN-LKDLEDDPRYTFVKGDVADYELVKELVR-----KVDGVVHLAAESHV------DR   90 (336)
T ss_dssp             HHHHCTTCEEEEEECCCTTCCGGG-GTTTTTCTTEEEEECCTTCHHHHHHHHH-----TCSEEEECCCCCCH------HH
T ss_pred             HHHhCCCCEEEEEecCcccCchhH-HhhhccCCceEEEEcCCCCHHHHHHHhh-----CCCEEEECCCCcCh------hh
Confidence            55665  89999998642  1111 2222212368899999999999998885     48999999996532      12


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEeccccccc-----------cCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATET-----------IGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      +.++++..+++|+.              .++||++||...+.           +..+...|+.+|.+++.+++.++.++ 
T Consensus        91 ~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-  169 (336)
T 2hun_A           91 SISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMPSSPYSATKAASDMLVLGWTRTY-  169 (336)
T ss_dssp             HHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCCCSHHHHHHHHHHHHHHHHHHHT-
T ss_pred             hhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHh-
Confidence            22334555556655              26999999975432           23456789999999999999999887 


Q ss_pred             CCCeEEEEEecCcccCccc
Q 042200          133 QYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~  151 (181)
                        |++++.++|+.+.++..
T Consensus       170 --~~~~~ilrp~~v~g~~~  186 (336)
T 2hun_A          170 --NLNASITRCTNNYGPYQ  186 (336)
T ss_dssp             --TCEEEEEEECEEESTTC
T ss_pred             --CCCEEEEeeeeeeCcCC
Confidence              79999999999999863

>1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A*

Probab=99.51  E-value=1.1e-14  Score=112.27  Aligned_cols=137  Identities=9%  Similarity=0.044  Sum_probs=99.3

Q ss_pred             cccC-CCEEEEeecchH--HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQH-RAKVIIADVQDD--LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |++. |++|++++|+..  ..+. +..+....++.++.+|++|.+++.+++++   +++|+||||||....      +.+
T Consensus        20 L~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~------~~~   89 (361)
T 1kew_A           20 IIKNTQDTVVNIDKLTYAGNLES-LSDISESNRYNFEHADICDSAEITRIFEQ---YQPDAVMHLAAESHV------DRS   89 (361)
T ss_dssp             HHHHCSCEEEEEECCCTTCCGGG-GTTTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH------HHH
T ss_pred             HHhcCCCeEEEEecCCCCCchhh-hhhhhcCCCeEEEECCCCCHHHHHHHHhh---cCCCEEEECCCCcCh------hhh
Confidence            5566 799999998641  1211 22222123688999999999999999984   368999999996532      122


Q ss_pred             HHHHHHhhheeec-----------c--e---------eEEEeccccccc---------------------cCccchhhHh
Q 042200           79 NEKVKRVMIMVVF-----------L--G---------VLLFTANLATET---------------------IGEALYDYLM  115 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------~--~---------~iv~iss~~~~~---------------------~~~~~~~y~~  115 (181)
                      .++++..+++|+.           .  +         +||++||...+.                     +..+...|+.
T Consensus        90 ~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~  169 (361)
T 1kew_A           90 ITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSA  169 (361)
T ss_dssp             HHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHH
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCcccccccccccCCCCCCCCCCCCCCccHH
Confidence            3344555666655           2  3         999999975432                     1234678999


Q ss_pred             hHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          116 SKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       116 sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +|.+++.+++.++.++   |++++.++|+.+.++..
T Consensus       170 sK~~~e~~~~~~~~~~---gi~~~~vrp~~v~G~~~  202 (361)
T 1kew_A          170 SKASSDHLVRAWRRTY---GLPTIVTNCSNNYGPYH  202 (361)
T ss_dssp             HHHHHHHHHHHHHHHH---CCCEEEEEECEEESTTC
T ss_pred             HHHHHHHHHHHHHHHh---CCcEEEEeeceeECCCC
Confidence            9999999999999887   79999999999999864

>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*

Probab=99.50  E-value=2e-14  Score=108.85  Aligned_cols=133  Identities=11%  Similarity=-0.002  Sum_probs=98.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|.....   ...+..  .+.++.+|++|.+++.++++.   .++|+|||+||....      ..+.++
T Consensus        20 L~~~G~~V~~~~r~~~~~---~~~~~~--~~~~~~~Dl~~~~~~~~~~~~---~~~d~vi~~a~~~~~------~~~~~~   85 (311)
T 2p5y_A           20 LLARGLEVAVLDNLATGK---RENVPK--GVPFFRVDLRDKEGVERAFRE---FRPTHVSHQAAQASV------KVSVED   85 (311)
T ss_dssp             HHTTTCEEEEECCCSSCC---GGGSCT--TCCEECCCTTCHHHHHHHHHH---HCCSEEEECCSCCCH------HHHHHC
T ss_pred             HHHCCCEEEEEECCCcCc---hhhccc--CeEEEECCCCCHHHHHHHHHh---cCCCEEEECccccCc------hhhhhC
Confidence            678999999999853211   112222  567889999999999998874   358999999996532      123344


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccC-------------ccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIG-------------EALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~-------------~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      +...+++|+.             .++||++||.++..+.             .+...|+.+|.+++.+++.++.++   |
T Consensus        86 ~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~  162 (311)
T 2p5y_A           86 PVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKSPYAASKAAFEHYLSVYGQSY---G  162 (311)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHHc---C
Confidence            5666777665             3689999997333221             245689999999999999999887   7


Q ss_pred             eEEEEEecCcccCccc
Q 042200          136 IRVNSIAHIVSATPFF  151 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~  151 (181)
                      ++++.++|+.+.+|..
T Consensus       163 ~~~~~lrp~~v~Gp~~  178 (311)
T 2p5y_A          163 LKWVSLRYGNVYGPRQ  178 (311)
T ss_dssp             CCEEEEEECEEECTTC
T ss_pred             CCEEEEeeccccCcCC
Confidence            9999999999998853

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=99.50  E-value=2.6e-14  Score=104.84  Aligned_cols=131  Identities=7%  Similarity=-0.053  Sum_probs=90.2

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCC-------
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDR-------   72 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~-------   72 (181)
                      |+++  |++|++++|+.++.+..    ..  ++.++.+|++|.+++.++++     ++|+||||||.......       
T Consensus        24 l~~~~~g~~V~~~~r~~~~~~~~----~~--~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~a~~~~~~~~~~~~~~~   92 (253)
T 1xq6_A           24 LKEGSDKFVAKGLVRSAQGKEKI----GG--EADVFIGDITDADSINPAFQ-----GIDALVILTSAVPKMKPGFDPTKG   92 (253)
T ss_dssp             HHHTTTTCEEEEEESCHHHHHHT----TC--CTTEEECCTTSHHHHHHHHT-----TCSEEEECCCCCCEECTTCCTTSS
T ss_pred             HHhcCCCcEEEEEEcCCCchhhc----CC--CeeEEEecCCCHHHHHHHHc-----CCCEEEEecccccccccccccccc
Confidence            5667  89999999998766543    22  57789999999999999887     38999999997532000       


Q ss_pred             CcccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchh-----hHhhHHHHHHHHHHHHHHhcCC
Q 042200           73 TTLDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYD-----YLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~-----y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      ...+...+.+...+++|+.             .++||++||..+..+.++...     |+.+|.+++.+++.       .
T Consensus        93 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~y~~sK~~~e~~~~~-------~  165 (253)
T 1xq6_A           93 GRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD-------S  165 (253)
T ss_dssp             CCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHT-------S
T ss_pred             ccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCccccccchhHHHHHHHHHHHHHh-------C
Confidence            0011111112223333333             468999999877654444444     55589999887753       5


Q ss_pred             CeEEEEEecCcccCcc
Q 042200          135 DIRVNSIAHIVSATPF  150 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~  150 (181)
                      |++++.++||.+.++.
T Consensus       166 ~i~~~~vrpg~v~~~~  181 (253)
T 1xq6_A          166 GTPYTIIRAGGLLDKE  181 (253)
T ss_dssp             SSCEEEEEECEEECSC
T ss_pred             CCceEEEecceeecCC
Confidence            8999999999999874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=99.49  E-value=7.2e-14  Score=100.94  Aligned_cols=122  Identities=4%  Similarity=-0.015  Sum_probs=91.4

Q ss_pred             cc-cCCCEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FI-QHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~-~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+ ++|++|++++|+.+ +++++.. ..  ..+.++.+|++|.+++.++++     ++|+||||||...     +.    
T Consensus        25 l~~~~g~~V~~~~r~~~~~~~~~~~-~~--~~~~~~~~D~~d~~~~~~~~~-----~~d~vv~~ag~~n-----~~----   87 (221)
T 3r6d_A           25 LLTYTDMHITLYGRQLKTRIPPEII-DH--ERVTVIEGSFQNPGXLEQAVT-----NAEVVFVGAMESG-----SD----   87 (221)
T ss_dssp             HHHHCCCEEEEEESSHHHHSCHHHH-TS--TTEEEEECCTTCHHHHHHHHT-----TCSEEEESCCCCH-----HH----
T ss_pred             HHhcCCceEEEEecCccccchhhcc-CC--CceEEEECCCCCHHHHHHHHc-----CCCEEEEcCCCCC-----hh----
Confidence            56 79999999999987 6655431 12  368999999999999999887     4799999999531     11    


Q ss_pred             HHHHHhhheeec--ceeEEEeccccccccCccch----------hhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Q 042200           80 EKVKRVMIMVVF--LGVLLFTANLATETIGEALY----------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSA  147 (181)
Q Consensus        80 ~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~----------~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~  147 (181)
                        .+..++.-..  .++||++||..+..+.+...          .|+.+|.+++.+++.       .|++++.|+||++.
T Consensus        88 --~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~vrpg~v~  158 (221)
T 3r6d_A           88 --MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRE-------SNLNYTILRLTWLY  158 (221)
T ss_dssp             --HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHHHHHHHHHHHHH-------SCSEEEEEEECEEE
T ss_pred             --HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHHHHHHHHHHHHh-------CCCCEEEEechhhc
Confidence              2222211111  46899999988776655444          899999999987763       48999999999998


Q ss_pred             Cc
Q 042200          148 TP  149 (181)
Q Consensus       148 t~  149 (181)
                      ++
T Consensus       159 ~~  160 (221)
T 3r6d_A          159 ND  160 (221)
T ss_dssp             CC
T ss_pred             CC
Confidence            87

>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}

Probab=99.49  E-value=6.7e-14  Score=103.91  Aligned_cols=123  Identities=15%  Similarity=0.121  Sum_probs=92.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+....      +.  ..+.++.+|++|.+++.++++     ++|+||||||....  .        
T Consensus        21 ~L~~~g~~V~~~~r~~~~~------~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~~~~--~--------   77 (267)
T 3ay3_A           21 HLGTLAHEVRLSDIVDLGA------AE--AHEEIVACDLADAQAVHDLVK-----DCDGIIHLGGVSVE--R--------   77 (267)
T ss_dssp             GGGGTEEEEEECCSSCCCC------CC--TTEEECCCCTTCHHHHHHHHT-----TCSEEEECCSCCSC--C--------
T ss_pred             HHHhCCCEEEEEeCCCccc------cC--CCccEEEccCCCHHHHHHHHc-----CCCEEEECCcCCCC--C--------
Confidence            4778899999999986421      11  257889999999999998887     38999999997522  1        


Q ss_pred             HHHHhhheeec-------------ceeEEEeccccccccCc------------cchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           81 KVKRVMIMVVF-------------LGVLLFTANLATETIGE------------ALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        81 ~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~------------~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .++..+++|+.             .++||++||...+...+            +...|+.+|.+++.+++.++.+   +|
T Consensus        78 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~---~g  154 (267)
T 3ay3_A           78 PWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHK---FD  154 (267)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHT---TC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHH---cC
Confidence            23444445544             46899999987654332            3578999999999999988654   48


Q ss_pred             eEEEEEecCcc-cCc
Q 042200          136 IRVNSIAHIVS-ATP  149 (181)
Q Consensus       136 i~v~~i~Pg~v-~t~  149 (181)
                      ++++.++||.+ .++
T Consensus       155 i~~~~lrp~~v~~~~  169 (267)
T 3ay3_A          155 IETLNIRIGSCFPKP  169 (267)
T ss_dssp             CCEEEEEECBCSSSC
T ss_pred             CCEEEEeceeecCCC
Confidence            99999999998 444

>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*

Probab=99.48  E-value=2.5e-13  Score=103.96  Aligned_cols=135  Identities=14%  Similarity=0.148  Sum_probs=93.8

Q ss_pred             cccCCCEEEEeecchHHHHHHH--hHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALC--KEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~--~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|+++.|+.+...+..  ..+... .++.++.+|++|.+++.++++     ++|+|||+|+....  .   ...
T Consensus        25 L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vih~A~~~~~--~---~~~   94 (337)
T 2c29_D           25 LLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIK-----GCTGVFHVATPMDF--E---SKD   94 (337)
T ss_dssp             HHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHT-----TCSEEEECCCCCCS--S---CSS
T ss_pred             HHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHc-----CCCEEEEeccccCC--C---CCC
Confidence            6789999999999865332221  112211 257889999999999988887     37999999986421  1   111


Q ss_pred             HHHHHHhhheeec--------------ceeEEEeccccccccCc----------------------cchhhHhhHHHHHH
Q 042200           79 NEKVKRVMIMVVF--------------LGVLLFTANLATETIGE----------------------ALYDYLMSKYAVLG  122 (181)
Q Consensus        79 ~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~~----------------------~~~~y~~sK~a~~~  122 (181)
                        ..+..+++|+.              .++||++||.++..+.+                      +...|+.+|.+.+.
T Consensus        95 --~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~  172 (337)
T 2c29_D           95 --PENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAEQ  172 (337)
T ss_dssp             --HHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHHH
T ss_pred             --hHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhhhcccCCccchHHHHHHHHHH
Confidence              12234444433              25899999987544321                      23369999999999


Q ss_pred             HHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          123 LMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       123 l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +++.++.++   |+++++++|+.+.+|..
T Consensus       173 ~~~~~~~~~---gi~~~~lrp~~v~Gp~~  198 (337)
T 2c29_D          173 AAWKYAKEN---NIDFITIIPTLVVGPFI  198 (337)
T ss_dssp             HHHHHHHHH---TCCEEEEEECEEESCCS
T ss_pred             HHHHHHHHc---CCcEEEEeCCceECCCC
Confidence            988877655   89999999999999864

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=99.48  E-value=4.2e-14  Score=102.40  Aligned_cols=134  Identities=12%  Similarity=-0.047  Sum_probs=93.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.++...    +.  ..+.++.+|++|.+++.++++     ++|+|||+||..... ..+.+.....
T Consensus        24 L~~~g~~V~~~~r~~~~~~~----~~--~~~~~~~~Dl~d~~~~~~~~~-----~~d~vi~~a~~~~~~-~~~~~~n~~~   91 (227)
T 3dhn_A           24 ALNRGFEVTAVVRHPEKIKI----EN--EHLKVKKADVSSLDEVCEVCK-----GADAVISAFNPGWNN-PDIYDETIKV   91 (227)
T ss_dssp             HHTTTCEEEEECSCGGGCCC----CC--TTEEEECCCTTCHHHHHHHHT-----TCSEEEECCCC-------CCSHHHHH
T ss_pred             HHHCCCEEEEEEcCcccchh----cc--CceEEEEecCCCHHHHHHHhc-----CCCEEEEeCcCCCCC-hhHHHHHHHH
Confidence            67899999999998765422    22  378999999999999999888     389999999975431 1111112222


Q ss_pred             HHHhhheeec--ceeEEEeccccccccCc----------cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           82 VKRVMIMVVF--LGVLLFTANLATETIGE----------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        82 ~~~~~~~n~~--~~~iv~iss~~~~~~~~----------~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ....++.-..  .+++|++||..+..+.+          +...|+.+|.+.+.+++.++.+   .|++++.++||.+.++
T Consensus        92 ~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~---~~~~~~ilrp~~v~g~  168 (227)
T 3dhn_A           92 YLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKE---KEIDWVFFSPAADMRP  168 (227)
T ss_dssp             HHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHHHHHHHHHHHTGGGC---CSSEEEEEECCSEEES
T ss_pred             HHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHHHHHHHHHHHHHhhc---cCccEEEEeCCcccCC
Confidence            2222221111  35899999987655432          3678999999999888877764   4899999999998876


Q ss_pred             c
Q 042200          150 F  150 (181)
Q Consensus       150 ~  150 (181)
                      .
T Consensus       169 ~  169 (227)
T 3dhn_A          169 G  169 (227)
T ss_dssp             C
T ss_pred             C
Confidence            3

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=99.47  E-value=5.8e-14  Score=107.97  Aligned_cols=136  Identities=10%  Similarity=0.022  Sum_probs=99.1

Q ss_pred             cccCCCEEEEeecchH----HHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQDD----LCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~----~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+..    ............  .++.++.+|++|.+++.++++     ++|+|||+||....      
T Consensus        45 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vih~A~~~~~------  113 (351)
T 3ruf_A           45 LLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-----GVDHVLHQAALGSV------  113 (351)
T ss_dssp             HHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-----TCSEEEECCCCCCH------
T ss_pred             HHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-----CCCEEEECCccCCc------
Confidence            6789999999999643    232222211100  268999999999999988887     48999999996432      


Q ss_pred             cCCHHHHHHhhheeec-------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHh
Q 042200           76 DTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      ..+.+++...+++|+.             .+++|++||...+...           .+...|+.+|.+.+.+++.++.++
T Consensus       114 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~  193 (351)
T 3ruf_A          114 PRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSPYAVTKYVNEIYAQVYARTY  193 (351)
T ss_dssp             HHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCChhHHHHHHHHHHHHHHHHHh
Confidence            1223334455555554             3589999997665332           235689999999999999999887


Q ss_pred             cCCCeEEEEEecCcccCccc
Q 042200          132 GQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~  151 (181)
                         |++++.++|+.+.++..
T Consensus       194 ---g~~~~ilRp~~v~G~~~  210 (351)
T 3ruf_A          194 ---GFKTIGLRYFNVFGRRQ  210 (351)
T ss_dssp             ---CCCCEEEEECSEESTTC
T ss_pred             ---CCCEEEEeeCceeCcCC
Confidence               79999999999998753

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=99.47  E-value=6.8e-14  Score=107.09  Aligned_cols=128  Identities=8%  Similarity=0.022  Sum_probs=90.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+....+....     .++.++.+|++|.+++.++++     ++|+|||+||....        ..++
T Consensus        33 L~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~a~~~~~--------~~~~   94 (342)
T 2x4g_A           33 IRAAGHDLVLIHRPSSQIQRLAY-----LEPECRVAEMLDHAGLERALR-----GLDGVIFSAGYYPS--------RPRR   94 (342)
T ss_dssp             HHHTTCEEEEEECTTSCGGGGGG-----GCCEEEECCTTCHHHHHHHTT-----TCSEEEEC------------------
T ss_pred             HHHCCCEEEEEecChHhhhhhcc-----CCeEEEEecCCCHHHHHHHHc-----CCCEEEECCccCcC--------CCCC
Confidence            67889999999998654432111     157889999999999988887     38999999996431        1223


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccCcc----------------chhhHhhHHHHHHHHHHHHHHhc
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIGEA----------------LYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~----------------~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      +...+++|+.             .+++|++||...+...+.                ...|+.+|.+.+.+++.++.   
T Consensus        95 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~~~Y~~sK~~~e~~~~~~~~---  171 (342)
T 2x4g_A           95 WQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQAR---  171 (342)
T ss_dssp             --CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTSCHHHHHHHHHHHHHHHHHH---
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCccccccChHHHHHHHHHHHHHHHhh---
Confidence            3444444443             368999999877654333                67899999999999999876   


Q ss_pred             CCCeEEEEEecCcccCccc
Q 042200          133 QYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~  151 (181)
                      . |++++.++||.+.++..
T Consensus       172 ~-g~~~~ilrp~~v~g~~~  189 (342)
T 2x4g_A          172 N-GLPVVIGIPGMVLGELD  189 (342)
T ss_dssp             T-TCCEEEEEECEEECSCC
T ss_pred             c-CCcEEEEeCCceECCCC
Confidence            3 89999999999998854

>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*

Probab=99.47  E-value=3.1e-14  Score=107.77  Aligned_cols=129  Identities=12%  Similarity=0.044  Sum_probs=96.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+........   .  ..+.++.+|++|.+ +.+.++    +  |+|||+||....      ..+.++
T Consensus        20 L~~~g~~V~~~~r~~~~~~~~~---~--~~~~~~~~Dl~d~~-~~~~~~----~--d~vih~A~~~~~------~~~~~~   81 (312)
T 3ko8_A           20 LVELGYEVVVVDNLSSGRREFV---N--PSAELHVRDLKDYS-WGAGIK----G--DVVFHFAANPEV------RLSTTE   81 (312)
T ss_dssp             HHHTTCEEEEECCCSSCCGGGS---C--TTSEEECCCTTSTT-TTTTCC----C--SEEEECCSSCSS------SGGGSC
T ss_pred             HHhCCCEEEEEeCCCCCchhhc---C--CCceEEECccccHH-HHhhcC----C--CEEEECCCCCCc------hhhhhC
Confidence            6789999999999765432211   2  36889999999987 655554    2  999999996432      223334


Q ss_pred             HHHhhheeec-------------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +...+++|+.             .+++|++||...+..           ..+...|+.+|.+.+.+++.++.++   |++
T Consensus        82 ~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~  158 (312)
T 3ko8_A           82 PIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATYARLF---GVR  158 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCC
Confidence            5555556655             358999999765522           2346789999999999999999988   899


Q ss_pred             EEEEecCcccCccc
Q 042200          138 VNSIAHIVSATPFF  151 (181)
Q Consensus       138 v~~i~Pg~v~t~~~  151 (181)
                      ++.++|+.+.++..
T Consensus       159 ~~~lrp~~v~g~~~  172 (312)
T 3ko8_A          159 CLAVRYANVVGPRL  172 (312)
T ss_dssp             EEEEEECEEECTTC
T ss_pred             EEEEeeccccCcCC
Confidence            99999999999853

>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}

Probab=99.47  E-value=1.2e-13  Score=105.39  Aligned_cols=132  Identities=12%  Similarity=0.095  Sum_probs=98.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.....   +.+..  ++.++.+|+++.+++.++++.   .++|+|||+||....  .    .+.++
T Consensus        21 L~~~g~~V~~~~r~~~~~~---~~~~~--~~~~~~~D~~~~~~~~~~~~~---~~~d~vih~a~~~~~--~----~~~~~   86 (330)
T 2c20_A           21 LVDEGLSVVVVDNLQTGHE---DAITE--GAKFYNGDLRDKAFLRDVFTQ---ENIEAVMHFAADSLV--G----VSMEK   86 (330)
T ss_dssp             HHHTTCEEEEEECCSSCCG---GGSCT--TSEEEECCTTCHHHHHHHHHH---SCEEEEEECCCCCCH--H----HHHHS
T ss_pred             HHhCCCEEEEEeCCCcCch---hhcCC--CcEEEECCCCCHHHHHHHHhh---cCCCEEEECCcccCc--c----ccccC
Confidence            6788999999998653321   22332  578899999999999999884   469999999997532  1    12334


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +...+++|+.             .+++|++||...+...           .+...|+.+|.+.+.+++.++.++   |++
T Consensus        87 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---~~~  163 (330)
T 2c20_A           87 PLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNTYGETKLAIEKMLHWYSQAS---NLR  163 (330)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHTS---SCE
T ss_pred             HHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCChHHHHHHHHHHHHHHHHHHh---CCc
Confidence            5555555555             3689999997654321           245789999999999999998776   899


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      ++.++|+.+.++.
T Consensus       164 ~~ilrp~~v~G~~  176 (330)
T 2c20_A          164 YKIFRYFNVAGAT  176 (330)
T ss_dssp             EEEEECSEEECCC
T ss_pred             EEEEecCcccCCC
Confidence            9999999988774

>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*

Probab=99.46  E-value=4.3e-13  Score=102.90  Aligned_cols=135  Identities=10%  Similarity=0.120  Sum_probs=97.4

Q ss_pred             cccCCCEEEEeecch----------HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCC
Q 042200            2 FIQHRAKVIIADVQD----------DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~----------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~   71 (181)
                      |+++|++|++++|+.          +..+........  ++.++.+|+++.+++.++++.   .++|+|||+||....  
T Consensus        22 L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~--~~~~~~~D~~~~~~~~~~~~~---~~~d~vih~A~~~~~--   94 (348)
T 1ek6_A           22 LLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGR--SVEFEEMDILDQGALQRLFKK---YSFMAVIHFAGLKAV--   94 (348)
T ss_dssp             HHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTC--CCEEEECCTTCHHHHHHHHHH---CCEEEEEECCSCCCH--
T ss_pred             HHHCCCEEEEEecCCcccccccccHHHHHHHHhccCC--ceEEEECCCCCHHHHHHHHHh---cCCCEEEECCCCcCc--
Confidence            678899999998853          223222211122  688999999999999999884   268999999997532  


Q ss_pred             CCcccCCHHHHHHhhheeec-------------ceeEEEecccccccc------------CccchhhHhhHHHHHHHHHH
Q 042200           72 RTTLDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETI------------GEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~l~~~  126 (181)
                      .    ...+++...+++|+.             .++||++||...+..            .|....|+.+|.+++.+++.
T Consensus        95 ~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~~~p~~~~Y~~sK~~~e~~~~~  170 (348)
T 1ek6_A           95 G----ESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRD  170 (348)
T ss_dssp             H----HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHH
T ss_pred             c----chhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence            1    122344555565655             368999999765421            12267899999999999999


Q ss_pred             HHHHhcCCCeEEEEEecCcccCc
Q 042200          127 LCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ++.+  ..++++..++|+.+..+
T Consensus       171 ~~~~--~~~~~~~~lR~~~v~G~  191 (348)
T 1ek6_A          171 LCQA--DKTWNAVLLRYFNPTGA  191 (348)
T ss_dssp             HHHH--CTTCEEEEEEECEEECC
T ss_pred             HHhc--CCCcceEEEeeccccCC
Confidence            9887  34699999999988776

>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*

Probab=99.46  E-value=9.1e-14  Score=106.70  Aligned_cols=135  Identities=10%  Similarity=-0.005  Sum_probs=97.5

Q ss_pred             cccC--CCEEEEeecchHH-HHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQH--RAKVIIADVQDDL-CRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++  |++|++++|+... .......+.. .++.++.+|++|.+++.++++.     +|+|||+||....      ..+
T Consensus        24 L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~~-----~d~vih~A~~~~~------~~~   91 (348)
T 1oc2_A           24 VYNNHPDVHVTVLDKLTYAGNKANLEAILG-DRVELVVGDIADAELVDKLAAK-----ADAIVHYAAESHN------DNS   91 (348)
T ss_dssp             HHHHCTTCEEEEEECCCTTCCGGGTGGGCS-SSEEEEECCTTCHHHHHHHHTT-----CSEEEECCSCCCH------HHH
T ss_pred             HHHhCCCCEEEEEeCCCCCCChhHHhhhcc-CCeEEEECCCCCHHHHHHHhhc-----CCEEEECCcccCc------cch
Confidence            5566  8999999996421 1111222321 3688999999999999988873     5999999996532      112


Q ss_pred             HHHHHHhhheeec------------ceeEEEeccccccc-----------------------cCccchhhHhhHHHHHHH
Q 042200           79 NEKVKRVMIMVVF------------LGVLLFTANLATET-----------------------IGEALYDYLMSKYAVLGL  123 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------~~~iv~iss~~~~~-----------------------~~~~~~~y~~sK~a~~~l  123 (181)
                      .++++..+++|+.            +++||++||...+.                       +..+...|+.+|.+.+.+
T Consensus        92 ~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~v~~SS~~vyg~~~~~~~~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~  171 (348)
T 1oc2_A           92 LNDPSPFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLI  171 (348)
T ss_dssp             HHCCHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHHhCCeEEEecccceeCCCcccccccccccccCCCcCCCCCCCCCCccHHHHHHHHHH
Confidence            2334455555554            45999999976432                       123456899999999999


Q ss_pred             HHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          124 MKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       124 ~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ++.++.++   |++++.++|+.+.++..
T Consensus       172 ~~~~~~~~---gi~~~ilrp~~v~G~~~  196 (348)
T 1oc2_A          172 VKAWVRSF---GVKATISNCSNNYGPYQ  196 (348)
T ss_dssp             HHHHHHHH---CCEEEEEEECCEESTTC
T ss_pred             HHHHHHHh---CCCEEEEeeceeeCCCC
Confidence            99999887   79999999999998864

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=99.45  E-value=5.9e-13  Score=96.08  Aligned_cols=130  Identities=7%  Similarity=-0.043  Sum_probs=90.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+++.....     ..+.++.+|++|.++  ..+     .++|+||||||....  ........+.
T Consensus        20 L~~~g~~V~~~~R~~~~~~~~~~-----~~~~~~~~D~~d~~~--~~~-----~~~d~vi~~ag~~~~--~~~~~~n~~~   85 (224)
T 3h2s_A           20 ARRRGHEVLAVVRDPQKAADRLG-----ATVATLVKEPLVLTE--ADL-----DSVDAVVDALSVPWG--SGRGYLHLDF   85 (224)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHTC-----TTSEEEECCGGGCCH--HHH-----TTCSEEEECCCCCTT--SSCTHHHHHH
T ss_pred             HHHCCCEEEEEEecccccccccC-----CCceEEecccccccH--hhc-----ccCCEEEECCccCCC--cchhhHHHHH
Confidence            67899999999999887765422     268899999999887  333     358999999998633  2222222222


Q ss_pred             HHHhhheeec-ceeEEEeccccccccCcc--------------chhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcc
Q 042200           82 VKRVMIMVVF-LGVLLFTANLATETIGEA--------------LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS  146 (181)
Q Consensus        82 ~~~~~~~n~~-~~~iv~iss~~~~~~~~~--------------~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v  146 (181)
                      ..+.++.-.. ++++|++||.++..+.+.              ...|+.+|.+.+.+ +.+   ....|++++.|+||.+
T Consensus        86 ~~~l~~a~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~~~---~~~~~i~~~ivrp~~v  161 (224)
T 3h2s_A           86 ATHLVSLLRNSDTLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEY-QFL---QMNANVNWIGISPSEA  161 (224)
T ss_dssp             HHHHHHTCTTCCCEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-HHH---TTCTTSCEEEEEECSB
T ss_pred             HHHHHHHHHHcCCcEEEEecceeeccCCCCccccccCCCCCccchhhHHHHHHHHHH-HHH---HhcCCCcEEEEcCccc
Confidence            3333322222 579999999876654332              67899999988854 222   2356899999999999


Q ss_pred             cCc
Q 042200          147 ATP  149 (181)
Q Consensus       147 ~t~  149 (181)
                      .++
T Consensus       162 ~g~  164 (224)
T 3h2s_A          162 FPS  164 (224)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            976

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=99.44  E-value=7.4e-14  Score=106.72  Aligned_cols=111  Identities=16%  Similarity=0.082  Sum_probs=81.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.....+....+   .++.++.+|++|.+++.++++.  . ++|+||||||....  .     +.++
T Consensus        40 L~~~g~~V~~~~r~~~~~~~~~~~l---~~v~~~~~Dl~d~~~~~~~~~~--~-~~D~vih~A~~~~~--~-----~~~~  106 (330)
T 2pzm_A           40 WLPQGHEILVIDNFATGKREVLPPV---AGLSVIEGSVTDAGLLERAFDS--F-KPTHVVHSAAAYKD--P-----DDWA  106 (330)
T ss_dssp             HGGGTCEEEEEECCSSSCGGGSCSC---TTEEEEECCTTCHHHHHHHHHH--H-CCSEEEECCCCCSC--T-----TCHH
T ss_pred             HHHCCCEEEEEECCCccchhhhhcc---CCceEEEeeCCCHHHHHHHHhh--c-CCCEEEECCccCCC--c-----cccC
Confidence            6789999999999754322222222   2688999999999999999884  1 58999999997643  2     3334


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccccC-----c------cchhhHhhHHHHHHHHHHH
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETIG-----E------ALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----~------~~~~y~~sK~a~~~l~~~l  127 (181)
                      ++  +++|+.             .++||++||.+.+...     +      +...|+.+|.+++.+++.+
T Consensus       107 ~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~~~~Y~~sK~~~e~~~~~~  174 (330)
T 2pzm_A          107 ED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAPFTSYGISKTAGEAFLMMS  174 (330)
T ss_dssp             HH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCCCSHHHHHHHHHHHHHHTC
T ss_pred             hh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCCCChHHHHHHHHHHHHHHc
Confidence            44  556655             3699999998765433     2      5678999999999998876

>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*

Probab=99.44  E-value=1.4e-13  Score=105.20  Aligned_cols=136  Identities=14%  Similarity=0.060  Sum_probs=96.4

Q ss_pred             cccC---C---CEEEEeecchHH-HHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQH---R---AKVIIADVQDDL-CRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~---G---~~Vv~~~r~~~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++   |   ++|++++|+... .......+....++.++.+|++|.+++.+++.     ++|+|||+||....     
T Consensus        20 L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~Vih~A~~~~~-----   89 (337)
T 1r6d_A           20 LLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR-----GVDAIVHFAAESHV-----   89 (337)
T ss_dssp             HHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT-----TCCEEEECCSCCCH-----
T ss_pred             HHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc-----CCCEEEECCCccCc-----
Confidence            4554   7   899999986421 11112223212368899999999999888874     58999999996532     


Q ss_pred             ccCCHHHHHHhhheeec-------------ceeEEEeccccccc-----------cCccchhhHhhHHHHHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATET-----------IGEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                       ..+.++++..+++|+.             .++||++||...+.           +..+...|+.+|.+.+.+++.++.+
T Consensus        90 -~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~  168 (337)
T 1r6d_A           90 -DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRT  168 (337)
T ss_dssp             -HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             -hhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHH
Confidence             1122334445555554             36899999975542           2235678999999999999999988


Q ss_pred             hcCCCeEEEEEecCcccCccc
Q 042200          131 LGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +   |++++.++|+.+.++..
T Consensus       169 ~---g~~~~ilrp~~v~G~~~  186 (337)
T 1r6d_A          169 Y---GLDVRITRCCNNYGPYQ  186 (337)
T ss_dssp             H---CCCEEEEEECEEECTTC
T ss_pred             H---CCCEEEEEeeeeECCCC
Confidence            7   79999999999998753

>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*

Probab=99.44  E-value=1.1e-13  Score=107.69  Aligned_cols=132  Identities=13%  Similarity=0.075  Sum_probs=96.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.......   ..  .++.++.+|++|.+++.++++     ++|+|||+||....  ..+.   .++
T Consensus        49 L~~~g~~V~~~~r~~~~~~~~---~~--~~v~~~~~Dl~d~~~~~~~~~-----~~d~Vih~A~~~~~--~~~~---~~~  113 (379)
T 2c5a_A           49 LKHEGHYVIASDWKKNEHMTE---DM--FCDEFHLVDLRVMENCLKVTE-----GVDHVFNLAADMGG--MGFI---QSN  113 (379)
T ss_dssp             HHHTTCEEEEEESSCCSSSCG---GG--TCSEEEECCTTSHHHHHHHHT-----TCSEEEECCCCCCC--HHHH---TTC
T ss_pred             HHHCCCeEEEEECCCccchhh---cc--CCceEEECCCCCHHHHHHHhC-----CCCEEEECceecCc--cccc---ccC
Confidence            678899999999975432211   01  257889999999999998886     48999999997542  1111   123


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccc------------------cCccchhhHhhHHHHHHHHHHHHHH
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATET------------------IGEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~------------------~~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      +...+++|+.             .++||++||...+.                  +..+...|+.+|.+.+.+++.++.+
T Consensus       114 ~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~  193 (379)
T 2c5a_A          114 HSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKD  193 (379)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCCCCCCCChhHHHHHHHHHHHHHHHHH
Confidence            4444554444             35899999976543                  1234568999999999999999887


Q ss_pred             hcCCCeEEEEEecCcccCccc
Q 042200          131 LGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +   |++++.++|+.+.++..
T Consensus       194 ~---gi~~~ilrp~~v~G~~~  211 (379)
T 2c5a_A          194 F---GIECRIGRFHNIYGPFG  211 (379)
T ss_dssp             H---CCEEEEEEECCEECTTS
T ss_pred             H---CCCEEEEEeCceeCcCC
Confidence            6   79999999999998753

>3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0

Probab=99.42  E-value=2e-13  Score=103.44  Aligned_cols=128  Identities=14%  Similarity=0.145  Sum_probs=93.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|+.|++..|+....+    .+.  ..+.++.+|+++ +++.++++     ++|+|||+||....      ..+.++
T Consensus        21 L~~~g~~v~~~~~~~~~~~----~~~--~~~~~~~~Dl~~-~~~~~~~~-----~~d~vih~a~~~~~------~~~~~~   82 (313)
T 3ehe_A           21 LSESNEIVVIDNLSSGNEE----FVN--EAARLVKADLAA-DDIKDYLK-----GAEEVWHIAANPDV------RIGAEN   82 (313)
T ss_dssp             HTTTSCEEEECCCSSCCGG----GSC--TTEEEECCCTTT-SCCHHHHT-----TCSEEEECCCCCCC------C-CCCC
T ss_pred             HHhCCCEEEEEcCCCCChh----hcC--CCcEEEECcCCh-HHHHHHhc-----CCCEEEECCCCCCh------hhhhhC
Confidence            6788955555555433221    122  268899999999 88888776     48999999996432      233344


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccc-----------cCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATET-----------IGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~-----------~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      ++..+++|+.             .+++|++||...+.           +..+...|+.+|.+.+.+++.++.++   |++
T Consensus        83 ~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---g~~  159 (313)
T 3ehe_A           83 PDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLYGASKLACEALIESYCHTF---DMQ  159 (313)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCC
Confidence            5666666665             46899999976552           23456789999999999999999887   899


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      ++.++|+.+.++.
T Consensus       160 ~~ilRp~~v~G~~  172 (313)
T 3ehe_A          160 AWIYRFANVIGRR  172 (313)
T ss_dssp             EEEEECSCEESTT
T ss_pred             EEEEeeccccCcC
Confidence            9999999999874

>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}

Probab=99.42  E-value=2.7e-13  Score=104.01  Aligned_cols=137  Identities=12%  Similarity=-0.035  Sum_probs=94.7

Q ss_pred             cccCC--CEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHR--AKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G--~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|  ++|++.+|... .....+..+....++.++.+|++|.+++.++++.   .++|+|||+||....  .    ..
T Consensus        44 L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~Vih~A~~~~~--~----~~  114 (346)
T 4egb_A           44 MLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKE---RDVQVIVNFAAESHV--D----RS  114 (346)
T ss_dssp             HHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH---HTCCEEEECCCCC-----------
T ss_pred             HHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhh---cCCCEEEECCcccch--h----hh
Confidence            56778  77888877541 1111122222124799999999999999999984   358999999997654  2    12


Q ss_pred             HHHHHHhhheeec-------------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           79 NEKVKRVMIMVVF-------------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        79 ~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      .+++...+++|+.             .+++|++||...+...            .+...|+.+|.+.+.+++.++.++  
T Consensus       115 ~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--  192 (346)
T 4egb_A          115 IENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPLAPNSPYSSSKASADMIALAYYKTY--  192 (346)
T ss_dssp             ----CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH--
T ss_pred             hhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCCCCCChhHHHHHHHHHHHHHHHHHh--
Confidence            2334445555544             4579999997654332            134689999999999999999886  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       |++++.++|+.+.++.
T Consensus       193 -g~~~~ilRp~~v~G~~  208 (346)
T 4egb_A          193 -QLPVIVTRCSNNYGPY  208 (346)
T ss_dssp             -CCCEEEEEECEEESTT
T ss_pred             -CCCEEEEeecceeCcC
Confidence             7999999999998875

>1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2

Probab=99.40  E-value=1.1e-12  Score=101.46  Aligned_cols=136  Identities=7%  Similarity=-0.011  Sum_probs=91.8

Q ss_pred             cccCCCEEEEeecchHHHH-HHHhHcCC-----CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQDDLCR-ALCKEFDS-----DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~-~~~~~~~~-----~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+..... .....+..     ..++.++.+|++|.+++.++++.   .++|+||||||....  .   
T Consensus        21 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~--~---   92 (372)
T 1db3_A           21 LLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE---VQPDEVYNLGAMSHV--A---   92 (372)
T ss_dssp             HHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH---HCCSEEEECCCCCTT--T---
T ss_pred             HHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHh---cCCCEEEECCcccCc--c---
Confidence            6788999999999865321 11122210     13688999999999999999884   158999999997543  1   


Q ss_pred             cCCHHHHHHhhheeec-------------c---eeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHH
Q 042200           76 DTDNEKVKRVMIMVVF-------------L---GVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------~---~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la  128 (181)
                       .+.+++...+++|+.             .   ++||++||.+.+...           .+...|+.+|.+++.+++.++
T Consensus        93 -~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~  171 (372)
T 1db3_A           93 -VSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYR  171 (372)
T ss_dssp             -TTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             -ccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCCCCCChHHHHHHHHHHHHHHHH
Confidence             222334555555554             2   699999997654321           246789999999999999999


Q ss_pred             HHhcCCCeEEEEEecCcccCc
Q 042200          129 VELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       129 ~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      .++   ++.+..++|+.+..|
T Consensus       172 ~~~---~~~~~~~r~~~~~gp  189 (372)
T 1db3_A          172 ESY---GMYACNGILFNHESP  189 (372)
T ss_dssp             HHH---CCCEEEEEECCEECT
T ss_pred             HHh---CCCeEEEEECCccCC
Confidence            887   677777777766554

>1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A*

Probab=99.40  E-value=1.8e-12  Score=99.07  Aligned_cols=135  Identities=13%  Similarity=0.084  Sum_probs=93.7

Q ss_pred             cccCCCEEEEeecch----HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD----DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|..    +..+........  ++.++.+|+++.+++.++++.   .++|+||||||....  ..    
T Consensus        20 L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~---~~~D~vih~A~~~~~--~~----   88 (338)
T 1udb_A           20 LLQNGHDVIILDNLCNSKRSVLPVIERLGGK--HPTFVEGDIRNEALMTEILHD---HAIDTVIHFAGLKAV--GE----   88 (338)
T ss_dssp             HHHTTCEEEEEECCSSCCTTHHHHHHHHHTS--CCEEEECCTTCHHHHHHHHHH---TTCSEEEECCSCCCH--HH----
T ss_pred             HHHCCCEEEEEecCCCcchhHHHHHHhhcCC--cceEEEccCCCHHHHHHHhhc---cCCCEEEECCccCcc--cc----
Confidence            678999999998642    222222111122  578899999999999998884   259999999996532  11    


Q ss_pred             CHHHHHHhhheeec-------------ceeEEEecccccccc-----------C-ccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           78 DNEKVKRVMIMVVF-------------LGVLLFTANLATETI-----------G-EALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~-----------~-~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      ..++....+++|+.             .++||++||...+..           . ++...|+.+|.+++.+++.++.++.
T Consensus        89 ~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~  168 (338)
T 1udb_A           89 SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP  168 (338)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST
T ss_pred             chhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCChHHHHHHHHHHHHHHHHHhcC
Confidence            12223444555554             368999999765421           1 2367899999999999999988752


Q ss_pred             CCCeEEEEEecCcccCc
Q 042200          133 QYDIRVNSIAHIVSATP  149 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~  149 (181)
                        ++++..++|+.+..+
T Consensus       169 --~~~~~ilR~~~v~G~  183 (338)
T 1udb_A          169 --DWSIALLRYFNPVGA  183 (338)
T ss_dssp             --TCEEEEEEECEEECC
T ss_pred             --CCceEEEeeceecCC
Confidence              789999998766544

>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}

Probab=99.40  E-value=4.6e-13  Score=101.67  Aligned_cols=136  Identities=13%  Similarity=0.149  Sum_probs=87.5

Q ss_pred             cccCCCEEEEeec-chHHHHH--HHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADV-QDDLCRA--LCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r-~~~~~~~--~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++| +.+...+  ....+... .++.++.+|++|.+++.++++     ++|+|||+|+....   .  . 
T Consensus        21 L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A~~~~~---~--~-   89 (322)
T 2p4h_X           21 LLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIE-----GCVGIFHTASPIDF---A--V-   89 (322)
T ss_dssp             HHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHT-----TCSEEEECCCCC----------
T ss_pred             HHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHc-----CCCEEEEcCCcccC---C--C-
Confidence            6789999999998 6532110  11122211 257889999999999998887     37999999974311   0  0 


Q ss_pred             CHHHHHHhhheeec--------------ceeEEEeccccccccCcc---------------------c-hhhHhhHHHHH
Q 042200           78 DNEKVKRVMIMVVF--------------LGVLLFTANLATETIGEA---------------------L-YDYLMSKYAVL  121 (181)
Q Consensus        78 ~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~~~---------------------~-~~y~~sK~a~~  121 (181)
                       .+.++..+++|+.              .++||++||..+..+.+.                     . ..|+.+|.+.+
T Consensus        90 -~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~~~~~~~~~p~~~~Y~~sK~~~e  168 (322)
T 2p4h_X           90 -SEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAE  168 (322)
T ss_dssp             -----CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCCHHHHHHHCCTTHHHHHHHHHHH
T ss_pred             -CChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccchhhhcccCcccccHHHHHHHHH
Confidence             0111223344433              258999999875543211                     1 16999999888


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCcccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      .+++.++.+   +|++++.++|+.+.+++..
T Consensus       169 ~~~~~~~~~---~gi~~~~lrp~~v~g~~~~  196 (322)
T 2p4h_X          169 KAVLEFGEQ---NGIDVVTLILPFIVGRFVC  196 (322)
T ss_dssp             HHHHHHHHH---TTCCEEEEEECEEESCCCS
T ss_pred             HHHHHHHHh---cCCcEEEEcCCceECCCCC
Confidence            777666544   4899999999999998643

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=99.40  E-value=1.1e-12  Score=93.36  Aligned_cols=126  Identities=8%  Similarity=-0.020  Sum_probs=87.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.++....   ..  .++.++.+|++|.+++.++++     .+|+|||+||....  ....+.....
T Consensus        23 l~~~g~~V~~~~r~~~~~~~~---~~--~~~~~~~~D~~~~~~~~~~~~-----~~d~vi~~a~~~~~--~~~~~~n~~~   90 (206)
T 1hdo_A           23 AVQAGYEVTVLVRDSSRLPSE---GP--RPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLGTRND--LSPTTVMSEG   90 (206)
T ss_dssp             HHHTTCEEEEEESCGGGSCSS---SC--CCSEEEESCTTSHHHHHHHHT-----TCSEEEECCCCTTC--CSCCCHHHHH
T ss_pred             HHHCCCeEEEEEeChhhcccc---cC--CceEEEEecCCCHHHHHHHHc-----CCCEEEECccCCCC--CCccchHHHH
Confidence            678899999999987654211   01  368899999999999998887     37999999997543  1111111111


Q ss_pred             HHHhhheeec--ceeEEEeccccccccCc----cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcc
Q 042200           82 VKRVMIMVVF--LGVLLFTANLATETIGE----ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVS  146 (181)
Q Consensus        82 ~~~~~~~n~~--~~~iv~iss~~~~~~~~----~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v  146 (181)
                      ....++.-..  .+++|++||.......+    +...|+.+|.+++.+++.       .|++++.++||.+
T Consensus        91 ~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~y~~~K~~~e~~~~~-------~~i~~~~lrp~~~  154 (206)
T 1hdo_A           91 ARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLRE-------SGLKYVAVMPPHI  154 (206)
T ss_dssp             HHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHHH-------TCSEEEEECCSEE
T ss_pred             HHHHHHHHHHhCCCeEEEEeeeeeccCcccccccchhHHHHHHHHHHHHHh-------CCCCEEEEeCCcc
Confidence            2222211111  46899999986654443    567899999999988742       4899999999998

>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.38  E-value=6.6e-13  Score=101.38  Aligned_cols=137  Identities=9%  Similarity=-0.051  Sum_probs=96.5

Q ss_pred             cccCCCEEEEeecchHHHH-HHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCR-ALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~-~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+..... .....+.....+.++.+|++|.+++.++++.   .++|+|||+||....  .    .+.+
T Consensus        34 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~Vih~A~~~~~--~----~~~~  104 (335)
T 1rpn_A           34 LLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIK---AQPQEVYNLAAQSFV--G----ASWN  104 (335)
T ss_dssp             HHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--H----HHTT
T ss_pred             HHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHH---cCCCEEEECccccch--h----hhhh
Confidence            6788999999999754311 1122221113688999999999999999884   158999999996432  1    1112


Q ss_pred             HHHHhhheeec------------c--eeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           81 KVKRVMIMVVF------------L--GVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        81 ~~~~~~~~n~~------------~--~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      ++...+++|+.            +  +++|++||...+...           .+...|+.+|.+.+.+++.++.++   +
T Consensus       105 ~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---~  181 (335)
T 1rpn_A          105 QPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---G  181 (335)
T ss_dssp             SHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---C
T ss_pred             ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCCCChhHHHHHHHHHHHHHHHHHc---C
Confidence            34445555554            2  689999997654322           124579999999999999998877   6


Q ss_pred             eEEEEEecCcccCcc
Q 042200          136 IRVNSIAHIVSATPF  150 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~  150 (181)
                      +++..++|+.+..+.
T Consensus       182 ~~~~i~r~~~v~Gp~  196 (335)
T 1rpn_A          182 LHASSGILFNHESPL  196 (335)
T ss_dssp             CCEEEEEECCEECTT
T ss_pred             CcEEEEeeCcccCCC
Confidence            888889998887764

>1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=99.38  E-value=6.5e-13  Score=103.07  Aligned_cols=136  Identities=7%  Similarity=-0.087  Sum_probs=96.5

Q ss_pred             cccCCCEEEEeecchHH-----HHHHHhHcC--CCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQDDL-----CRALCKEFD--SDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~-----~~~~~~~~~--~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|++++|+...     ++.....+.  ...++.++.+|++|.+++.++++.   .++|+||||||....     
T Consensus        44 L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~-----  115 (375)
T 1t2a_A           44 LLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE---VKPTEIYNLGAQSHV-----  115 (375)
T ss_dssp             HHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH-----
T ss_pred             HHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHh---cCCCEEEECCCcccc-----
Confidence            67889999999997542     111111110  013688999999999999999884   158999999996532     


Q ss_pred             ccCCHHHHHHhhheeec------------c----eeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF------------L----GVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~------------~----~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~l  127 (181)
                       ..+.+++...+++|+.            .    ++||++||...+..           ..+...|+.+|.+++.+++.+
T Consensus       116 -~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~  194 (375)
T 1t2a_A          116 -KISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNF  194 (375)
T ss_dssp             -HHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             -cccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccCCCCCCChhHHHHHHHHHHHHHH
Confidence             1123445666666665            2    69999999766532           124568999999999999999


Q ss_pred             HHHhcCCCeEEEEEecCcccCc
Q 042200          128 CVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +.++   ++.+..++|+.+..|
T Consensus       195 ~~~~---~~~~~i~r~~~~~gp  213 (375)
T 1t2a_A          195 REAY---NLFAVNGILFNHESP  213 (375)
T ss_dssp             HHHH---CCEEEEEEECCEECT
T ss_pred             HHHh---CCCEEEEecccccCC
Confidence            9887   688888888877665

>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A

Probab=99.38  E-value=1e-12  Score=100.61  Aligned_cols=132  Identities=11%  Similarity=0.094  Sum_probs=94.3

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCCh-hHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTID-SDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~-~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++ |++|++++|+..+.+..    ....++.++.+|+++. +.+.++++     ++|+|||+||....  ..    ..
T Consensus        20 L~~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A~~~~~--~~----~~   84 (345)
T 2bll_A           20 LLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVAIATP--IE----YT   84 (345)
T ss_dssp             HHHSTTCEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBCCCCH--HH----HH
T ss_pred             HHHhCCCEEEEEeCCcchHHHh----hcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEcccccCc--cc----hh
Confidence            5666 89999999987654322    1113688999999984 56777776     37999999997542  11    11


Q ss_pred             HHHHHhhheeec------------ceeEEEeccccccccCc------------------cchhhHhhHHHHHHHHHHHHH
Q 042200           80 EKVKRVMIMVVF------------LGVLLFTANLATETIGE------------------ALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        80 ~~~~~~~~~n~~------------~~~iv~iss~~~~~~~~------------------~~~~y~~sK~a~~~l~~~la~  129 (181)
                      +++...+++|+.            ++++|++||...+...+                  +...|+.+|.+.+.+++.++.
T Consensus        85 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~  164 (345)
T 2bll_A           85 RNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGE  164 (345)
T ss_dssp             HSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEecHHHcCCCCCCCcCCcccccccCcccCcccccHHHHHHHHHHHHHHHH
Confidence            234444555544            47899999976542211                  123799999999999999988


Q ss_pred             HhcCCCeEEEEEecCcccCccc
Q 042200          130 ELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ++   |++++.++|+.+.++..
T Consensus       165 ~~---~~~~~ilrp~~v~G~~~  183 (345)
T 2bll_A          165 KE---GLQFTLFRPFNWMGPRL  183 (345)
T ss_dssp             HH---CCCEEEEEECSEECSSC
T ss_pred             hc---CCCEEEEcCCcccCCCc
Confidence            76   79999999999988753

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=99.37  E-value=1.7e-12  Score=99.65  Aligned_cols=119  Identities=8%  Similarity=-0.042  Sum_probs=93.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+...         .  .+.++.+|++|.+++.++++     ++|+|||+||....        +...
T Consensus        39 L~~~G~~V~~~~r~~~~---------~--~~~~~~~Dl~d~~~~~~~~~-----~~d~vih~A~~~~~--------~~~~   94 (347)
T 4id9_A           39 LRTQGRTVRGFDLRPSG---------T--GGEEVVGSLEDGQALSDAIM-----GVSAVLHLGAFMSW--------APAD   94 (347)
T ss_dssp             HHHTTCCEEEEESSCCS---------S--CCSEEESCTTCHHHHHHHHT-----TCSEEEECCCCCCS--------SGGG
T ss_pred             HHhCCCEEEEEeCCCCC---------C--CccEEecCcCCHHHHHHHHh-----CCCEEEECCcccCc--------chhh
Confidence            67889999999998654         2  57789999999999998887     48999999997643        1222


Q ss_pred             HHHhhheeec-------------ceeEEEecccccccc-------------CccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATETI-------------GEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~~-------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      ++..+++|+.             .++||++||...+..             ..+...|+.+|.+.+.+++.++.+.   |
T Consensus        95 ~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---~  171 (347)
T 4id9_A           95 RDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNSPYGLTKLLGEELVRFHQRSG---A  171 (347)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHS---S
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHHHHhc---C
Confidence            3555666655             358999999654422             2356789999999999999998885   8


Q ss_pred             eEEEEEecCccc
Q 042200          136 IRVNSIAHIVSA  147 (181)
Q Consensus       136 i~v~~i~Pg~v~  147 (181)
                      ++++.++|+.+.
T Consensus       172 ~~~~ilRp~~v~  183 (347)
T 4id9_A          172 METVILRFSHTQ  183 (347)
T ss_dssp             SEEEEEEECEEE
T ss_pred             CceEEEccceEe
Confidence            999999999998

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=99.35  E-value=1.1e-12  Score=100.29  Aligned_cols=126  Identities=13%  Similarity=0.067  Sum_probs=89.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.....+.+..+   .++.++.+|++|.+++.++++.   +++|+||||||....  .     +.++
T Consensus        41 L~~~g~~V~~~~r~~~~~~~~l~~~---~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih~A~~~~~--~-----~~~~  107 (333)
T 2q1w_A           41 LLERGDKVVGIDNFATGRREHLKDH---PNLTFVEGSIADHALVNQLIGD---LQPDAVVHTAASYKD--P-----DDWY  107 (333)
T ss_dssp             HHHTTCEEEEEECCSSCCGGGSCCC---TTEEEEECCTTCHHHHHHHHHH---HCCSEEEECCCCCSC--T-----TCHH
T ss_pred             HHHCCCEEEEEECCCccchhhHhhc---CCceEEEEeCCCHHHHHHHHhc---cCCcEEEECceecCC--C-----ccCC
Confidence            6788999999999754321111111   2688999999999999998884   368999999997643  2     2233


Q ss_pred             HHHhhheeec-------------ceeEEEeccccccc----cC--------ccc-hhhHhhHHHHHHHHHH-HHHHhcCC
Q 042200           82 VKRVMIMVVF-------------LGVLLFTANLATET----IG--------EAL-YDYLMSKYAVLGLMKN-LCVELGQY  134 (181)
Q Consensus        82 ~~~~~~~n~~-------------~~~iv~iss~~~~~----~~--------~~~-~~y~~sK~a~~~l~~~-la~~~~~~  134 (181)
                      ++  +++|+.             .++||++||.+.+.    ..        .+. ..|+.+|.+++.+++. ++      
T Consensus       108 ~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~~p~~~~Y~~sK~~~E~~~~~s~~------  179 (333)
T 2q1w_A          108 ND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAISKSANEDYLEYSGL------  179 (333)
T ss_dssp             HH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCCCCTTCHHHHHHHHHHHHHHHHTC------
T ss_pred             hH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCCCCCCCchHHHHHHHHHHHHhhhC------
Confidence            33  555554             36899999976553    21        234 7899999999999887 54      


Q ss_pred             CeEEEEEecCcccCcc
Q 042200          135 DIRVNSIAHIVSATPF  150 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~  150 (181)
                        ++..++|+.+..+.
T Consensus       180 --~~~ilR~~~v~gp~  193 (333)
T 2q1w_A          180 --DFVTFRLANVVGPR  193 (333)
T ss_dssp             --CEEEEEESEEESTT
T ss_pred             --CeEEEeeceEECcC
Confidence              56678888776654

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=99.34  E-value=1.7e-12  Score=100.60  Aligned_cols=131  Identities=17%  Similarity=0.121  Sum_probs=95.6

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecC-ChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVT-IDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~-~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++ |++|++++|+.+.......    ..++.++.+|++ +.+++.++++     ++|+|||+||....  ..    ..
T Consensus        44 L~~~~g~~V~~~~r~~~~~~~~~~----~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~A~~~~~--~~----~~  108 (372)
T 3slg_A           44 ILETTDWEVFGMDMQTDRLGDLVK----HERMHFFEGDITINKEWVEYHVK-----KCDVILPLVAIATP--AT----YV  108 (372)
T ss_dssp             HHHHSSCEEEEEESCCTTTGGGGG----STTEEEEECCTTTCHHHHHHHHH-----HCSEEEECBCCCCH--HH----HH
T ss_pred             HHhCCCCEEEEEeCChhhhhhhcc----CCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEcCccccH--HH----Hh
Confidence            5666 8999999998755443322    137999999999 9999998888     38999999997643  11    12


Q ss_pred             HHHHHhhheeec------------ceeEEEeccccccccC------------------ccchhhHhhHHHHHHHHHHHHH
Q 042200           80 EKVKRVMIMVVF------------LGVLLFTANLATETIG------------------EALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        80 ~~~~~~~~~n~~------------~~~iv~iss~~~~~~~------------------~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      ++....+++|+.            ++++|++||...+...                  .+...|+.+|.+.+.+++.++.
T Consensus       109 ~~~~~~~~~nv~~~~~ll~a~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~  188 (372)
T 3slg_A          109 KQPLRVFELDFEANLPIVRSAVKYGKHLVFPSTSEVYGMCADEQFDPDASALTYGPINKPRWIYACSKQLMDRVIWGYGM  188 (372)
T ss_dssp             HCHHHHHHHHTTTTHHHHHHHHHHTCEEEEECCGGGGBSCCCSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHT
T ss_pred             hCHHHHHHHHHHHHHHHHHHHHHhCCcEEEeCcHHHhCCCCCCCCCccccccccCCCCCCCCcHHHHHHHHHHHHHHHHH
Confidence            233344455544            4689999996543221                  2334799999999999998876


Q ss_pred             HhcCCCeEEEEEecCcccCccc
Q 042200          130 ELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +    |++++.++|+.+.++..
T Consensus       189 ~----g~~~~ilRp~~v~G~~~  206 (372)
T 3slg_A          189 E----GLNFTLFRPFNWIGPGL  206 (372)
T ss_dssp             T----TCEEEEEEECSEECSSC
T ss_pred             C----CCCEEEEccccccCCCc
Confidence            5    79999999999988753

>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A

Probab=99.34  E-value=2.5e-13  Score=103.91  Aligned_cols=135  Identities=13%  Similarity=0.102  Sum_probs=88.9

Q ss_pred             cccCCCEEEEeecchHHHHH--HHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVIIADVQDDLCRA--LCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~--~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|++|+++.|+.+...+  ....+....++.++.+|++|.+++.++++     ++|+|||+||....  ..     .
T Consensus        29 Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-----~~D~Vih~A~~~~~--~~-----~   96 (338)
T 2rh8_A           29 LLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIA-----GCDFVFHVATPVHF--AS-----E   96 (338)
T ss_dssp             HHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHT-----TCSEEEEESSCCCC----------
T ss_pred             HHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHc-----CCCEEEEeCCccCC--CC-----C
Confidence            67899999999987543211  01112111258889999999998888887     37999999986421  10     0


Q ss_pred             HHHHHhhheeec--------------ceeEEEeccccccccCc------------------------cchhhHhhHHHHH
Q 042200           80 EKVKRVMIMVVF--------------LGVLLFTANLATETIGE------------------------ALYDYLMSKYAVL  121 (181)
Q Consensus        80 ~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~~------------------------~~~~y~~sK~a~~  121 (181)
                      +..+..+++|+.              .++||++||.++..+.+                        ....|+.+|.+.+
T Consensus        97 ~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E  176 (338)
T 2rh8_A           97 DPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE  176 (338)
T ss_dssp             ------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-------CCCCCCTTSCCHHH
T ss_pred             CcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchhhccccCCccchHHHHHHHHH
Confidence            111223333333              25899999976432110                        0115999999999


Q ss_pred             HHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          122 GLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       122 ~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      .+++.++.++   |+++++++|+.+.+|..
T Consensus       177 ~~~~~~~~~~---gi~~~~lrp~~v~Gp~~  203 (338)
T 2rh8_A          177 KAAWKFAEEN---NIDLITVIPTLMAGSSL  203 (338)
T ss_dssp             HHHHHHHHHH---TCCEEEEEECEEESCCS
T ss_pred             HHHHHHHHHc---CCcEEEEeCCceECCCC
Confidence            9888877655   89999999999999864

>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}

Probab=99.34  E-value=1.2e-12  Score=103.34  Aligned_cols=132  Identities=9%  Similarity=-0.006  Sum_probs=89.0

Q ss_pred             cccCCCEEEEeecchH---HHHHHHhHcCC----------CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDD---LCRALCKEFDS----------DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~---~~~~~~~~~~~----------~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++.|++|++++|+..   ..++..+.+..          ..++.++.+|+++.+++.      .++++|+||||||...
T Consensus        89 L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~------~~~~~d~Vih~A~~~~  162 (427)
T 4f6c_A           89 LQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV------LPENMDTIIHAGARTD  162 (427)
T ss_dssp             HTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC------CSSCCSEEEECCCCC-
T ss_pred             HHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC------CcCCCCEEEECCcccC
Confidence            6788999999999865   22222221100          037999999999988777      2357999999999764


Q ss_pred             CCCCCcccCCHHHHHHhhheeec------------ceeEEEeccccc--c----------------ccCccchhhHhhHH
Q 042200           69 NMDRTTLDTDNEKVKRVMIMVVF------------LGVLLFTANLAT--E----------------TIGEALYDYLMSKY  118 (181)
Q Consensus        69 ~~~~~~~~~~~~~~~~~~~~n~~------------~~~iv~iss~~~--~----------------~~~~~~~~y~~sK~  118 (181)
                      .         .+.+...+++|+.            .+++|++||...  .                .+..+...|+.+|.
T Consensus       163 ~---------~~~~~~~~~~Nv~g~~~l~~aa~~~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~  233 (427)
T 4f6c_A          163 H---------FGDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKF  233 (427)
T ss_dssp             ---------------CHHHHHHHHHHHHHHHHHHTTCEEEEEEEGGGGSEECSSCSCCEECTTCSCSSCCCCSHHHHHHH
T ss_pred             C---------CCCHHHHHHHHHHHHHHHHHHHHhcCCcEEEECchHhCCCccCCCCCccccccccccCCCCCCchHHHHH
Confidence            2         1223444444444            568999999876  0                00225678999999


Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCcccCcccc
Q 042200          119 AVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       119 a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      +.+.+++.++.    .|++++.++||.+.++...
T Consensus       234 ~~E~~~~~~~~----~g~~~~ivRpg~v~G~~~~  263 (427)
T 4f6c_A          234 YSELKVLEAVN----NGLDGRIVRVGNLTSPYNG  263 (427)
T ss_dssp             HHHHHHHHHHH----TTCCEEEEEECCEESCSSS
T ss_pred             HHHHHHHHHHH----cCCCEEEEeCCeeecCCCC
Confidence            99999998753    5899999999999988543

>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}

Probab=99.34  E-value=7.1e-13  Score=100.19  Aligned_cols=129  Identities=12%  Similarity=0.044  Sum_probs=94.8

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++  |++|++++|+..... ...      ++.++.+|++|.+++.++++.   .++|+|||+||....  .     ..
T Consensus        22 L~~~~~g~~V~~~~r~~~~~~-~~~------~~~~~~~D~~d~~~~~~~~~~---~~~d~vih~a~~~~~--~-----~~   84 (312)
T 2yy7_A           22 LRKLYGTENVIASDIRKLNTD-VVN------SGPFEVVNALDFNQIEHLVEV---HKITDIYLMAALLSA--T-----AE   84 (312)
T ss_dssp             HHHHHCGGGEEEEESCCCSCH-HHH------SSCEEECCTTCHHHHHHHHHH---TTCCEEEECCCCCHH--H-----HH
T ss_pred             HHHhCCCCEEEEEcCCCcccc-ccC------CCceEEecCCCHHHHHHHHhh---cCCCEEEECCccCCC--c-----hh
Confidence            4566  899999999754321 111      466889999999999999884   258999999996432  1     12


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +++...+++|+.             .+++|++||...+...            .+...|+.+|.+.+.+++.++.++   
T Consensus        85 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~~~~~~---  161 (312)
T 2yy7_A           85 KNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPSTVYGISKQAGERWCEYYHNIY---  161 (312)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCCSHHHHHHHHHHHHHHHHHHHH---
T ss_pred             hChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCCchhHHHHHHHHHHHHHHHHhc---
Confidence            334455555554             3589999997655331            235689999999999999998877   


Q ss_pred             CeEEEEEecCcccCcc
Q 042200          135 DIRVNSIAHIVSATPF  150 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~  150 (181)
                      |++++.++|+.+.++.
T Consensus       162 ~~~~~~lrp~~v~g~~  177 (312)
T 2yy7_A          162 GVDVRSIRYPGLISWS  177 (312)
T ss_dssp             CCEEECEEECEEECSS
T ss_pred             CCcEEEEeCCeEecCC
Confidence            7999999999998864

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=99.32  E-value=1.2e-12  Score=101.84  Aligned_cols=133  Identities=11%  Similarity=-0.007  Sum_probs=95.4

Q ss_pred             cccCC-CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHR-AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++| ++|++++|+.....   +.+.....+.++.+|++|.+++.++++     ++|+|||+||....  .    .+.+
T Consensus        52 L~~~g~~~V~~~~r~~~~~~---~~l~~~~~v~~~~~Dl~d~~~l~~~~~-----~~d~Vih~A~~~~~--~----~~~~  117 (377)
T 2q1s_A           52 LLELGVNQVHVVDNLLSAEK---INVPDHPAVRFSETSITDDALLASLQD-----EYDYVFHLATYHGN--Q----SSIH  117 (377)
T ss_dssp             HHHTTCSEEEEECCCTTCCG---GGSCCCTTEEEECSCTTCHHHHHHCCS-----CCSEEEECCCCSCH--H----HHHH
T ss_pred             HHHcCCceEEEEECCCCCch---hhccCCCceEEEECCCCCHHHHHHHhh-----CCCEEEECCCccCc--h----hhhh
Confidence            67889 99999999754321   122111368899999999998887766     58999999996532  1    1223


Q ss_pred             HHHHhhheeec-----------c---eeEEEeccccccc----------------cC-ccchhhHhhHHHHHHHHHHHHH
Q 042200           81 KVKRVMIMVVF-----------L---GVLLFTANLATET----------------IG-EALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        81 ~~~~~~~~n~~-----------~---~~iv~iss~~~~~----------------~~-~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      ++...+++|+.           .   +++|++||...+.                +. .+...|+.+|.+.+.+++.++.
T Consensus       118 ~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~  197 (377)
T 2q1s_A          118 DPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHK  197 (377)
T ss_dssp             CHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCCCSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccccccCCCCchHHHHHHHHHHHHHHHH
Confidence            34555555554           3   4899999965321                21 3456899999999999999988


Q ss_pred             HhcCCCeEEEEEecCcccCccc
Q 042200          130 ELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ++   |++++.++|+.+.++..
T Consensus       198 ~~---gi~~~ilRp~~v~G~~~  216 (377)
T 2q1s_A          198 QH---QLPTVRARFQNVYGPGE  216 (377)
T ss_dssp             HH---CCCEEEEEECCEECTTC
T ss_pred             Hh---CCCEEEEeeccEECCCC
Confidence            77   79999999999998754

>2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens}

Probab=99.32  E-value=8.2e-13  Score=101.20  Aligned_cols=131  Identities=15%  Similarity=0.172  Sum_probs=91.5

Q ss_pred             cccCC-------CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHR-------AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G-------~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|       ++|++++|+.+....   ..  ..++.++.+|++|.+++.++++    +++|+|||+||....     
T Consensus        34 L~~~g~~~~r~~~~V~~~~r~~~~~~~---~~--~~~~~~~~~Dl~d~~~~~~~~~----~~~d~vih~A~~~~~-----   99 (342)
T 2hrz_A           34 LVKDGSLGGKPVEKFTLIDVFQPEAPA---GF--SGAVDARAADLSAPGEAEKLVE----ARPDVIFHLAAIVSG-----   99 (342)
T ss_dssp             HHHHCEETTEEEEEEEEEESSCCCCCT---TC--CSEEEEEECCTTSTTHHHHHHH----TCCSEEEECCCCCHH-----
T ss_pred             HHhcCCcccCCCceEEEEEccCCcccc---cc--CCceeEEEcCCCCHHHHHHHHh----cCCCEEEECCccCcc-----
Confidence            56778       789999997542211   11  1368899999999999998886    468999999996421     


Q ss_pred             ccCCHHHHHHhhheeec------------c------eeEEEeccccccccC-c----------cchhhHhhHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF------------L------GVLLFTANLATETIG-E----------ALYDYLMSKYAVLGLMK  125 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~------------~------~~iv~iss~~~~~~~-~----------~~~~y~~sK~a~~~l~~  125 (181)
                        .+.+++...+++|+.            .      ++||++||.+.+... +          +...|+.+|.+++.+++
T Consensus       100 --~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~  177 (342)
T 2hrz_A          100 --EAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTTPLTSYGTQKAICELLLS  177 (342)
T ss_dssp             --HHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCCCCSSHHHHHHHHHHHHHH
T ss_pred             --cccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCCCCcchHHHHHHHHHHHHH
Confidence              223456666666665            3      589999998665432 1          56789999999999999


Q ss_pred             HHHHHhc--CCCeEEEEEe--cCcccC
Q 042200          126 NLCVELG--QYDIRVNSIA--HIVSAT  148 (181)
Q Consensus       126 ~la~~~~--~~~i~v~~i~--Pg~v~t  148 (181)
                      .++.+..  ...+|++.+.  ||.+.+
T Consensus       178 ~~~~~~~~~~~~ir~~~v~g~pg~~~~  204 (342)
T 2hrz_A          178 DYSRRGFFDGIGIRLPTICIRPGKPNA  204 (342)
T ss_dssp             HHHHTTSCEEEEEEECEETTCCSSCCC
T ss_pred             HHHHhcCCCceeEEeeeEEecCCCCcc
Confidence            8887642  1235555555  665443

>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*

Probab=99.31  E-value=2.6e-12  Score=99.86  Aligned_cols=136  Identities=13%  Similarity=-0.049  Sum_probs=92.4

Q ss_pred             cccCCCEEEEeecchHH-----HHHHHhHcCCC-C-ceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQDDL-----CRALCKEFDSD-E-LISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~-----~~~~~~~~~~~-~-~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|++++|+...     ++.....+... . ++.++.+|++|.+++.++++.   .++|+|||+||....     
T Consensus        48 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~Vih~A~~~~~-----  119 (381)
T 1n7h_A           48 LLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV---IKPDEVYNLAAQSHV-----  119 (381)
T ss_dssp             HHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH-----
T ss_pred             HHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHh---cCCCEEEECCcccCc-----
Confidence            67889999999997543     22111111100 1 688999999999999999884   158999999996532     


Q ss_pred             ccCCHHHHHHhhheeec--------------c----eeEEEecccccccc----------CccchhhHhhHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF--------------L----GVLLFTANLATETI----------GEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~--------------~----~~iv~iss~~~~~~----------~~~~~~y~~sK~a~~~l~~~  126 (181)
                       ..+.+++...+++|+.              .    ++||++||...+..          ..+...|+.+|.+.+.+++.
T Consensus       120 -~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~  198 (381)
T 1n7h_A          120 -AVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVN  198 (381)
T ss_dssp             -HHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHH
T ss_pred             -cccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCCCCCCCCCCchHHHHHHHHHHHHH
Confidence             1223445666666665              1    39999999765432          34567899999999999999


Q ss_pred             HHHHhcCCCeEEEEEecCcccCc
Q 042200          127 LCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ++.++   ++.+..+.|+.+..|
T Consensus       199 ~~~~~---~~~~~~~r~~~~~gp  218 (381)
T 1n7h_A          199 YREAY---GLFACNGILFNHESP  218 (381)
T ss_dssp             HHHHH---CCEEEEEEECCEECT
T ss_pred             HHHHh---CCcEEEEEeCceeCC
Confidence            99887   555555555544433

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=99.30  E-value=9.7e-12  Score=89.35  Aligned_cols=128  Identities=12%  Similarity=0.029  Sum_probs=86.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+++....    .  .+.++.+|++|.++  +.+     .++|+||||||....    ......+.
T Consensus        20 L~~~g~~V~~~~R~~~~~~~~~----~--~~~~~~~D~~d~~~--~~~-----~~~d~vi~~ag~~~~----~~~~~~~~   82 (221)
T 3ew7_A           20 AKNRGHEVTAIVRNAGKITQTH----K--DINILQKDIFDLTL--SDL-----SDQNVVVDAYGISPD----EAEKHVTS   82 (221)
T ss_dssp             HHHTTCEEEEEESCSHHHHHHC----S--SSEEEECCGGGCCH--HHH-----TTCSEEEECCCSSTT----TTTSHHHH
T ss_pred             HHhCCCEEEEEEcCchhhhhcc----C--CCeEEeccccChhh--hhh-----cCCCEEEECCcCCcc----ccchHHHH
Confidence            6789999999999988776543    2  68899999999887  333     358999999998532    11222333


Q ss_pred             HHHhhheeec--ceeEEEeccccccccCc------------cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCccc
Q 042200           82 VKRVMIMVVF--LGVLLFTANLATETIGE------------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSA  147 (181)
Q Consensus        82 ~~~~~~~n~~--~~~iv~iss~~~~~~~~------------~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~  147 (181)
                      ..+.++.-..  .+++|++||..++.+.+            +...|+.+|.+.+.+. .+..  ...|++++.|+||.+.
T Consensus        83 ~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~-~~~~--~~~gi~~~ivrp~~v~  159 (221)
T 3ew7_A           83 LDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLE-HLKS--HQAEFSWTYISPSAMF  159 (221)
T ss_dssp             HHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCHHHHHHHHH-HHHT--TTTTSCEEEEECSSCC
T ss_pred             HHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHHHHHHHHHH-HHHh--hccCccEEEEeCccee
Confidence            3333333222  47899999987765433            2445999999988762 2222  1568999999999998


Q ss_pred             Cc
Q 042200          148 TP  149 (181)
Q Consensus       148 t~  149 (181)
                      ++
T Consensus       160 g~  161 (221)
T 3ew7_A          160 EP  161 (221)
T ss_dssp             CC
T ss_pred             cC
Confidence            86

>2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A*

Probab=99.30  E-value=2.6e-12  Score=99.00  Aligned_cols=132  Identities=12%  Similarity=0.102  Sum_probs=94.3

Q ss_pred             cccCC-CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHR-AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++| ++|++++|+.....  ...+.   .+. +.+|+++.+.+..+++...++++|+|||+||....        +.+
T Consensus        66 L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~Vih~A~~~~~--------~~~  131 (357)
T 2x6t_A           66 LNDKGITDILVVDNLKDGTK--FVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST--------TEW  131 (357)
T ss_dssp             HHHTTCCCEEEEECCSSGGG--GGGTT---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCT--------TCC
T ss_pred             HHHCCCcEEEEEecCCCcch--hhccc---Cce-EeeecCcHHHHHHHHhhcccCCCCEEEECCcccCC--------ccC
Confidence            67889 89999998754321  12222   222 78899999999888874224579999999997532        112


Q ss_pred             HHHHhhheeec------------ceeEEEeccccccccCc-----------cchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           81 KVKRVMIMVVF------------LGVLLFTANLATETIGE-----------ALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        81 ~~~~~~~~n~~------------~~~iv~iss~~~~~~~~-----------~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +++..+++|+.            +.++|++||...+...+           +...|+.+|.+.+.+++.++.++   |++
T Consensus       132 ~~~~~~~~n~~~~~~ll~a~~~~~~r~V~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~  208 (357)
T 2x6t_A          132 DGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVFGYSKFLFDEYVRQILPEA---NSQ  208 (357)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGCSCSSCCCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCeEEEEcchHHhCCCCCCCcCCcCCCCCCChhHHHHHHHHHHHHHHHHHc---CCC
Confidence            23444455544            23899999986653322           25689999999999999988765   899


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      ++.++|+.+.++.
T Consensus       209 ~~ilRp~~v~Gp~  221 (357)
T 2x6t_A          209 IVGFRYFNVYGPR  221 (357)
T ss_dssp             EEEEEECEEESSS
T ss_pred             EEEEecCeEECCC
Confidence            9999999999874

>3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A*

Probab=99.29  E-value=2.1e-12  Score=97.82  Aligned_cols=125  Identities=13%  Similarity=0.136  Sum_probs=91.0

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++  |++|++++|+.....          .+.++.+|++|.+++.++++.   .++|+|||+||....       ...
T Consensus        19 L~~~~~g~~V~~~~r~~~~~~----------~~~~~~~D~~d~~~~~~~~~~---~~~d~vih~a~~~~~-------~~~   78 (317)
T 3ajr_A           19 LAEKYGKKNVIASDIVQRDTG----------GIKFITLDVSNRDEIDRAVEK---YSIDAIFHLAGILSA-------KGE   78 (317)
T ss_dssp             HHHHHCGGGEEEEESSCCCCT----------TCCEEECCTTCHHHHHHHHHH---TTCCEEEECCCCCHH-------HHH
T ss_pred             HHHhcCCCEEEEecCCCcccc----------CceEEEecCCCHHHHHHHHhh---cCCcEEEECCcccCC-------ccc
Confidence            4556  788999988643211          356789999999999999884   368999999996432       112


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +++...+++|+.             .+++|++||...+.+.            .+...|+.+|.+.+.+++.++.++   
T Consensus        79 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---  155 (317)
T 3ajr_A           79 KDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKF---  155 (317)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHHHHHHHHHH---
T ss_pred             cChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCchHHHHHHHHHHHHHHHHHhc---
Confidence            334455555554             3589999998765432            136789999999999999988776   


Q ss_pred             CeEEEEEecCcccCc
Q 042200          135 DIRVNSIAHIVSATP  149 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~  149 (181)
                      |++++.++|+.+..+
T Consensus       156 ~~~~~~lR~~~~~g~  170 (317)
T 3ajr_A          156 GLDVRSLRYPGIISY  170 (317)
T ss_dssp             CCEEEEEEECEEECS
T ss_pred             CCeEEEEecCcEecc
Confidence            799999987766553

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=99.28  E-value=9.3e-12  Score=94.19  Aligned_cols=131  Identities=9%  Similarity=0.004  Sum_probs=89.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC---C
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT---D   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~---~   78 (181)
                      |+++|++|++++|+.....  ..      .+.++.+|++ .+++.++++     ++|+|||+||....  ......   .
T Consensus        22 L~~~g~~V~~~~r~~~~~~--~~------~~~~~~~Dl~-~~~~~~~~~-----~~d~Vih~a~~~~~--~~~~~~~~~n   85 (311)
T 3m2p_A           22 IKNDGNTPIILTRSIGNKA--IN------DYEYRVSDYT-LEDLINQLN-----DVDAVVHLAATRGS--QGKISEFHDN   85 (311)
T ss_dssp             HHHTTCEEEEEESCCC-------------CCEEEECCCC-HHHHHHHTT-----TCSEEEECCCCCCS--SSCGGGTHHH
T ss_pred             HHhCCCEEEEEeCCCCccc--CC------ceEEEEcccc-HHHHHHhhc-----CCCEEEEccccCCC--CChHHHHHHH
Confidence            6788999999999843322  22      5888999999 998888887     58999999998654  211111   1


Q ss_pred             HHHHHHhhheeec--ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCc
Q 042200           79 NEKVKRVMIMVVF--LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIV  145 (181)
Q Consensus        79 ~~~~~~~~~~n~~--~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~  145 (181)
                      .....+.++.-..  .+++|++||...+...           .+...|+.+|.+.+.+++.++.+.   |++++.++|+.
T Consensus        86 ~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---g~~~~ilRp~~  162 (311)
T 3m2p_A           86 EILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSRKK---GLCIKNLRFAH  162 (311)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHHHHHHHS---CCEEEEEEECE
T ss_pred             HHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHc---CCCEEEEeeCc
Confidence            1111111111111  3579999996554221           134689999999999999988864   89999999999


Q ss_pred             ccCccc
Q 042200          146 SATPFF  151 (181)
Q Consensus       146 v~t~~~  151 (181)
                      +.++..
T Consensus       163 v~G~~~  168 (311)
T 3m2p_A          163 LYGFNE  168 (311)
T ss_dssp             EECSCC
T ss_pred             eeCcCC
Confidence            988753

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=99.28  E-value=2e-12  Score=99.92  Aligned_cols=131  Identities=11%  Similarity=0.046  Sum_probs=89.6

Q ss_pred             ccc--CCCEEEEeecchHHHH---HHHh------HcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCC
Q 042200            2 FIQ--HRAKVIIADVQDDLCR---ALCK------EFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         2 l~~--~G~~Vv~~~r~~~~~~---~~~~------~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~   70 (181)
                      |++  .|++|++++|+.....   ...+      .+.. ..+.++.+|+++.+++.++..    .++|+||||||.... 
T Consensus        30 L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~~~----~~~D~vih~A~~~~~-  103 (362)
T 3sxp_A           30 FQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIG-FKGEVIAADINNPLDLRRLEK----LHFDYLFHQAAVSDT-  103 (362)
T ss_dssp             HHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTT-CCSEEEECCTTCHHHHHHHTT----SCCSEEEECCCCCGG-
T ss_pred             HHhhCCCCeEEEEECCCccccccccchhhhhhhhhccc-cCceEEECCCCCHHHHHHhhc----cCCCEEEECCccCCc-
Confidence            566  8999999999654111   0111      1111 357899999999999988822    469999999995421 


Q ss_pred             CCCcccCCHHHHHHhhheeec------------ceeEEEeccccccccC----------ccchhhHhhHHHHHHHHHHHH
Q 042200           71 DRTTLDTDNEKVKRVMIMVVF------------LGVLLFTANLATETIG----------EALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~~n~~------------~~~iv~iss~~~~~~~----------~~~~~y~~sK~a~~~l~~~la  128 (181)
                             +.++++..+++|+.            +++||++||...+...          .+...|+.+|.+.+.+++.++
T Consensus       104 -------~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~~vyg~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~  176 (362)
T 3sxp_A          104 -------TMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSAGVYGNTKAPNVVGKNESPENVYGFSKLCMDEFVLSHS  176 (362)
T ss_dssp             -------GCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGGCSCCSSBCTTSCCCCSSHHHHHHHHHHHHHHHTT
T ss_pred             -------cccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcHHHhCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHh
Confidence                   22345566666665            4569999995543221          234469999999999998877


Q ss_pred             HHhcCCCeEEEEEecCcccCcc
Q 042200          129 VELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       129 ~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .+     +++..++|+.+..|.
T Consensus       177 ~~-----~~~~~lR~~~v~Gp~  193 (362)
T 3sxp_A          177 ND-----NVQVGLRYFNVYGPR  193 (362)
T ss_dssp             TT-----SCEEEEEECSEESTT
T ss_pred             cc-----CCEEEEEeCceeCcC
Confidence            65     677888888887764

>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*

Probab=99.26  E-value=5.1e-12  Score=96.87  Aligned_cols=130  Identities=10%  Similarity=-0.009  Sum_probs=89.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+..........+....++.++.+|+++..          +.++|+|||+||....  ....    ++
T Consensus        47 L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~----------~~~~d~vih~A~~~~~--~~~~----~~  110 (343)
T 2b69_A           47 LMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPL----------YIEVDQIYHLASPASP--PNYM----YN  110 (343)
T ss_dssp             HHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCC----------CCCCSEEEECCSCCSH--HHHT----TC
T ss_pred             HHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChh----------hcCCCEEEECccccCc--hhhh----hC
Confidence            678899999999864322222222222236889999998742          2468999999997542  1111    12


Q ss_pred             HHHhhheeec------------ceeEEEeccccccc----------------cCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           82 VKRVMIMVVF------------LGVLLFTANLATET----------------IGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        82 ~~~~~~~n~~------------~~~iv~iss~~~~~----------------~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      +...+++|+.            +.++|++||...+.                +..+...|+.+|.+.+.+++.++.++  
T Consensus       111 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~--  188 (343)
T 2b69_A          111 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE--  188 (343)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHhCCcEEEECcHHHhCCCCCCCCcccccccCCCCCCCCchHHHHHHHHHHHHHHHHHh--
Confidence            2334444443            45899999975542                22235579999999999999998876  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       |++++.++|+.+.++.
T Consensus       189 -~~~~~ilrp~~v~G~~  204 (343)
T 2b69_A          189 -GVEVRVARIFNTFGPR  204 (343)
T ss_dssp             -CCCEEEEEECCEECTT
T ss_pred             -CCcEEEEEEcceeCcC
Confidence             7999999999998875

>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A

Probab=99.26  E-value=6.4e-12  Score=95.16  Aligned_cols=119  Identities=8%  Similarity=-0.054  Sum_probs=62.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+.         .  .  ++.+|+++.+++.++++.   .++|+|||+||....  .    .+.++
T Consensus        22 L~~~g~~V~~~~r~~~~---------~--~--~~~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~--~----~~~~~   79 (315)
T 2ydy_A           22 FQQNNWHAVGCGFRRAR---------P--K--FEQVNLLDSNAVHHIIHD---FQPHVIVHCAAERRP--D----VVENQ   79 (315)
T ss_dssp             HHTTTCEEEEEC-------------------------------CHHHHHH---HCCSEEEECC-----------------
T ss_pred             HHhCCCeEEEEccCCCC---------C--C--eEEecCCCHHHHHHHHHh---hCCCEEEECCcccCh--h----hhhcC
Confidence            67889999999986543         1  2  678999999999988884   158999999997543  1    23455


Q ss_pred             HHHhhheeec------------ceeEEEecccccccc----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           82 VKRVMIMVVF------------LGVLLFTANLATETI----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        82 ~~~~~~~n~~------------~~~iv~iss~~~~~~----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +...+++|+.            ++++|++||...+.+          ..+...|+.+|.+++.+++.++.++       .
T Consensus        80 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~-------~  152 (315)
T 2ydy_A           80 PDAASQLNVDASGNLAKEAAAVGAFLIYISSDYVFDGTNPPYREEDIPAPLNLYGKTKLDGEKAVLENNLGA-------A  152 (315)
T ss_dssp             --------CHHHHHHHHHHHHHTCEEEEEEEGGGSCSSSCSBCTTSCCCCCSHHHHHHHHHHHHHHHHCTTC-------E
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHHHcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCe-------E
Confidence            6667777766            568999999876543          2456789999999999998875332       4


Q ss_pred             EEecCcccCc
Q 042200          140 SIAHIVSATP  149 (181)
Q Consensus       140 ~i~Pg~v~t~  149 (181)
                      .|+|+.+..+
T Consensus       153 ~lR~~~v~G~  162 (315)
T 2ydy_A          153 VLRIPILYGE  162 (315)
T ss_dssp             EEEECSEECS
T ss_pred             EEeeeeeeCC
Confidence            5555555443

>1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2

Probab=99.24  E-value=7e-12  Score=104.75  Aligned_cols=136  Identities=13%  Similarity=0.159  Sum_probs=95.1

Q ss_pred             cccCCCEEEEeecchHH----HHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDL----CRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~----~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+...    .+.. ..+.. ..+.++.+|+++.+++.++++.   .++|+|||+||....  ....  
T Consensus        31 L~~~G~~V~~~~r~~~~~~~~~~~l-~~~~~-~~v~~v~~Dl~d~~~l~~~~~~---~~~D~Vih~A~~~~~--~~~~--  101 (699)
T 1z45_A           31 LIENGYDCVVADNLSNSTYDSVARL-EVLTK-HHIPFYEVDLCDRKGLEKVFKE---YKIDSVIHFAGLKAV--GEST--  101 (699)
T ss_dssp             HHHTTCEEEEEECCSSCCTHHHHHH-HHHHT-SCCCEEECCTTCHHHHHHHHHH---SCCCEEEECCSCCCH--HHHH--
T ss_pred             HHHCcCEEEEEECCCcchHHHHHHH-hhccC-CceEEEEcCCCCHHHHHHHHHh---CCCCEEEECCcccCc--Cccc--
Confidence            67889999999986432    2221 11111 2577899999999999998884   268999999997542  1111  


Q ss_pred             CHHHHHHhhheeec-------------ceeEEEecccccccc---------------CccchhhHhhHHHHHHHHHHHHH
Q 042200           78 DNEKVKRVMIMVVF-------------LGVLLFTANLATETI---------------GEALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~---------------~~~~~~y~~sK~a~~~l~~~la~  129 (181)
                        +.....+++|+.             .++||++||.+.+..               ..+...|+.+|.+++.+++.++.
T Consensus       102 --~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~  179 (699)
T 1z45_A          102 --QIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLYN  179 (699)
T ss_dssp             --HSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred             --cCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCCCCCCChHHHHHHHHHHHHHHHHH
Confidence              112334444444             368999999765421               11346899999999999999988


Q ss_pred             HhcCCCeEEEEEecCcccCc
Q 042200          130 ELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +. +.|+++..++|+.+..+
T Consensus       180 ~~-~~g~~~~ilR~~~vyG~  198 (699)
T 1z45_A          180 SD-KKSWKFAILRYFNPIGA  198 (699)
T ss_dssp             HS-TTSCEEEEEEECEEECC
T ss_pred             hc-cCCCcEEEEEeccccCC
Confidence            75 35899999999888765

>1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1

Probab=99.23  E-value=1.6e-11  Score=102.02  Aligned_cols=132  Identities=12%  Similarity=0.122  Sum_probs=94.4

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhH-HHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSD-VKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~-i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++ |++|++++|+.......    ....++.++.+|+++.++ +.++++     ++|+|||+||....  ..    ..
T Consensus       335 Ll~~~g~~V~~~~r~~~~~~~~----~~~~~v~~v~~Dl~d~~~~~~~~~~-----~~D~Vih~Aa~~~~--~~----~~  399 (660)
T 1z7e_A          335 LLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVAIATP--IE----YT  399 (660)
T ss_dssp             HHHSSSEEEEEEESCCTTTGGG----TTCTTEEEEECCTTTCHHHHHHHHH-----HCSEEEECCCCCCT--HH----HH
T ss_pred             HHhcCCCEEEEEEcCchhhhhh----ccCCceEEEECCCCCcHHHHHHhhc-----CCCEEEECceecCc--cc----cc
Confidence            5666 89999999986543321    111368899999999765 666665     37999999997543  11    12


Q ss_pred             HHHHHhhheeec------------ceeEEEeccccccccC------------------ccchhhHhhHHHHHHHHHHHHH
Q 042200           80 EKVKRVMIMVVF------------LGVLLFTANLATETIG------------------EALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        80 ~~~~~~~~~n~~------------~~~iv~iss~~~~~~~------------------~~~~~y~~sK~a~~~l~~~la~  129 (181)
                      +++...+++|+.            ++++|++||...+...                  .+...|+.+|.+.+.+++.++.
T Consensus       400 ~~~~~~~~~Nv~gt~~ll~aa~~~~~r~V~~SS~~vyg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~sK~~~E~~~~~~~~  479 (660)
T 1z7e_A          400 RNPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGE  479 (660)
T ss_dssp             HSHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCSSSBCTTTCCEEECCTTCTTHHHHHHHHHHHHHHHHHHH
T ss_pred             cCHHHHHHhhhHHHHHHHHHHHHhCCEEEEEecHHHcCCCCCcccCCCccccccCcccCCCCCcHHHHHHHHHHHHHHHH
Confidence            234445555554            4789999997654221                  1223699999999999999988


Q ss_pred             HhcCCCeEEEEEecCcccCccc
Q 042200          130 ELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ++   |++++.++||.+.++..
T Consensus       480 ~~---gi~~~ilRpg~v~Gp~~  498 (660)
T 1z7e_A          480 KE---GLQFTLFRPFNWMGPRL  498 (660)
T ss_dssp             HH---CCCEEEEEECSEESTTS
T ss_pred             Hc---CCCEEEECCCcccCCCc
Confidence            77   79999999999998753

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=99.23  E-value=1.5e-11  Score=89.72  Aligned_cols=125  Identities=10%  Similarity=0.008  Sum_probs=77.3

Q ss_pred             CcccCC-CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHR-AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++| ++|++++|+.+++...   ..  ..+.++.+|++|.+++.++++     ++|+||||+|....     .    
T Consensus        42 ~L~~~G~~~V~~~~R~~~~~~~~---~~--~~~~~~~~Dl~d~~~~~~~~~-----~~D~vv~~a~~~~~-----~----  102 (236)
T 3qvo_A           42 QLADKQTIKQTLFARQPAKIHKP---YP--TNSQIIMGDVLNHAALKQAMQ-----GQDIVYANLTGEDL-----D----  102 (236)
T ss_dssp             HHTTCTTEEEEEEESSGGGSCSS---CC--TTEEEEECCTTCHHHHHHHHT-----TCSEEEEECCSTTH-----H----
T ss_pred             HHHhCCCceEEEEEcChhhhccc---cc--CCcEEEEecCCCHHHHHHHhc-----CCCEEEEcCCCCch-----h----
Confidence            378899 8999999997654321   11  368899999999999999988     37999999985321     0    


Q ss_pred             HHHHHhhheeec--ceeEEEeccccccccCccchh---------hHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           80 EKVKRVMIMVVF--LGVLLFTANLATETIGEALYD---------YLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        80 ~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~---------y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ...+..++.-..  .++||++||...+.+.+....         +...+...       ...+.+.||+++.|+||++.+
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~l~~~gi~~~~vrPg~i~~  175 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRA-------ADAIEASGLEYTILRPAWLTD  175 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGHHHHHH-------HHHHHTSCSEEEEEEECEEEC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHHHHHHH-------HHHHHHCCCCEEEEeCCcccC
Confidence            111112111111  468999999877654433111         11112111       122346799999999999988


Q ss_pred             ccc
Q 042200          149 PFF  151 (181)
Q Consensus       149 ~~~  151 (181)
                      +..
T Consensus       176 ~~~  178 (236)
T 3qvo_A          176 EDI  178 (236)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            743

>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2

Probab=99.22  E-value=1.2e-11  Score=93.23  Aligned_cols=133  Identities=13%  Similarity=0.101  Sum_probs=91.6

Q ss_pred             cccCC-CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHR-AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++| ++|++++|+.....  ...+.   .+. +.+|+++.+.+..+++...++++|+|||+||....        ..+
T Consensus        19 L~~~g~~~V~~~~r~~~~~~--~~~~~---~~~-~~~d~~~~~~~~~~~~~~~~~~~d~vi~~a~~~~~--------~~~   84 (310)
T 1eq2_A           19 LNDKGITDILVVDNLKDGTK--FVNLV---DLN-IADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST--------TEW   84 (310)
T ss_dssp             HHTTTCCCEEEEECCSSGGG--GHHHH---TSC-CSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCT--------TCC
T ss_pred             HHHCCCcEEEEEccCCCCch--hhhcC---cce-eccccccHHHHHHHHhccccCCCcEEEECcccccC--------ccc
Confidence            67889 89999999754321  01111   122 77899999988888873112369999999997532        111


Q ss_pred             HHHHhhheeec------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           81 KVKRVMIMVVF------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        81 ~~~~~~~~n~~------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      ++...+++|+.            +.++|++||...+...           .+...|+.+|.+.+.+++.++.++   |++
T Consensus        85 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---g~~  161 (310)
T 1eq2_A           85 DGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQ  161 (310)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSC
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHcCCeEEEEeeHHHhCCCCCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHHc---CCC
Confidence            23344444443            2289999997654322           125679999999999999988764   899


Q ss_pred             EEEEecCcccCccc
Q 042200          138 VNSIAHIVSATPFF  151 (181)
Q Consensus       138 v~~i~Pg~v~t~~~  151 (181)
                      ++.++|+.+.++..
T Consensus       162 ~~~lrp~~v~G~~~  175 (310)
T 1eq2_A          162 IVGFRYFNVYGPRE  175 (310)
T ss_dssp             EEEEEECEEESSSC
T ss_pred             EEEEeCCcEECcCC
Confidence            99999999998753

>1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A*

Probab=99.19  E-value=5.2e-11  Score=90.30  Aligned_cols=104  Identities=14%  Similarity=0.128  Sum_probs=75.4

Q ss_pred             eecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec-------------ceeEEEeccccc
Q 042200           37 CNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF-------------LGVLLFTANLAT  103 (181)
Q Consensus        37 ~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~  103 (181)
                      +|++|.+++.++++.   .++|+|||+||....  ..   ...++....+++|+.             .+++|++||...
T Consensus        39 ~D~~d~~~~~~~~~~---~~~d~vih~a~~~~~--~~---~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~v  110 (321)
T 1e6u_A           39 LNLLDSRAVHDFFAS---ERIDQVYLAAAKVGG--IV---ANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCI  110 (321)
T ss_dssp             CCTTCHHHHHHHHHH---HCCSEEEECCCCCCC--HH---HHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGG
T ss_pred             CCccCHHHHHHHHHh---cCCCEEEEcCeecCC--cc---hhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHH
Confidence            699999999998874   258999999997532  11   112223444444544             358999999765


Q ss_pred             ccc----------------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          104 ETI----------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       104 ~~~----------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +..                .|....|+.+|.+.+.+++.++.++   |++++.++|+.+.++..
T Consensus       111 yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~~~~~---~~~~~ilrp~~v~G~~~  171 (321)
T 1e6u_A          111 YPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GRDYRSVMPTNLYGPHD  171 (321)
T ss_dssp             SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEESTTC
T ss_pred             cCCCCCCCcCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHh---CCCEEEEEeCCcCCcCC
Confidence            421                1113589999999999999998876   79999999999998753

>1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2

Probab=99.18  E-value=2.8e-11  Score=90.63  Aligned_cols=98  Identities=12%  Similarity=-0.013  Sum_probs=71.7

Q ss_pred             eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec------------ceeEEEeccccc
Q 042200           36 CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------LGVLLFTANLAT  103 (181)
Q Consensus        36 ~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------~~~iv~iss~~~  103 (181)
                      .+|++|.+++.++++.   .++|+|||+||....      ..+.+++...+++|+.            +.++|++||...
T Consensus        46 ~~Dl~d~~~~~~~~~~---~~~d~vih~A~~~~~------~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~iv~~SS~~v  116 (292)
T 1vl0_A           46 DLDITNVLAVNKFFNE---KKPNVVINCAAHTAV------DKCEEQYDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYV  116 (292)
T ss_dssp             TCCTTCHHHHHHHHHH---HCCSEEEECCCCCCH------HHHHHCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             cCCCCCHHHHHHHHHh---cCCCEEEECCccCCH------HHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEechHHe
Confidence            3799999999998884   158999999996432      1223445666666665            348999999765


Q ss_pred             cccCc-----------cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          104 ETIGE-----------ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       104 ~~~~~-----------~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +.+.+           +...|+.+|.+++.+++.++.       .+..++|+.+.++
T Consensus       117 ~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~~~~~~~-------~~~~lR~~~v~G~  166 (292)
T 1vl0_A          117 FDGEAKEPITEFDEVNPQSAYGKTKLEGENFVKALNP-------KYYIVRTAWLYGD  166 (292)
T ss_dssp             SCSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEESS
T ss_pred             ECCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHhhCC-------CeEEEeeeeeeCC
Confidence            43322           356899999999999987653       3678888888865

>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2

Probab=99.16  E-value=2.3e-12  Score=92.37  Aligned_cols=116  Identities=9%  Similarity=-0.028  Sum_probs=83.6

Q ss_pred             cccCCC--EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRA--KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|+  +|++++|+...       ..  .++.++.+|+++.+++.+++       +|+||||||....        +.
T Consensus        25 l~~~g~~~~V~~~~r~~~~-------~~--~~~~~~~~D~~~~~~~~~~~-------~d~vi~~a~~~~~--------~~   80 (215)
T 2a35_A           25 ILSEPTLAKVIAPARKALA-------EH--PRLDNPVGPLAELLPQLDGS-------IDTAFCCLGTTIK--------EA   80 (215)
T ss_dssp             HHHCTTCCEEECCBSSCCC-------CC--TTEECCBSCHHHHGGGCCSC-------CSEEEECCCCCHH--------HH
T ss_pred             HHhCCCCCeEEEEeCCCcc-------cC--CCceEEeccccCHHHHHHhh-------hcEEEECeeeccc--------cC
Confidence            667888  89999997654       11  26888899998876554333       7999999996431        12


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE-EEEEecCc
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR-VNSIAHIV  145 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~-v~~i~Pg~  145 (181)
                      ++++..+++|+.             .+++|++||.....  ++...|+.+|.+++.+++.       .|++ ++.++||.
T Consensus        81 ~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--~~~~~y~~sK~~~e~~~~~-------~~~~~~~~vrp~~  151 (215)
T 2a35_A           81 GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--KSSIFYNRVKGELEQALQE-------QGWPQLTIARPSL  151 (215)
T ss_dssp             SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHTT-------SCCSEEEEEECCS
T ss_pred             CCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--CCccHHHHHHHHHHHHHHH-------cCCCeEEEEeCce
Confidence            224444444544             35899999976653  3456899999999988764       3898 99999999


Q ss_pred             ccCcc
Q 042200          146 SATPF  150 (181)
Q Consensus       146 v~t~~  150 (181)
                      +.++.
T Consensus       152 v~g~~  156 (215)
T 2a35_A          152 LFGPR  156 (215)
T ss_dssp             EESTT
T ss_pred             eeCCC
Confidence            99874

>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}

Probab=99.14  E-value=2e-11  Score=91.29  Aligned_cols=128  Identities=9%  Similarity=-0.069  Sum_probs=87.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+.       +.  ..+.++.+|++|.+++.++++    +++|+|||+||.....+....+.....
T Consensus        22 L~~~g~~V~~~~r~~~~-------~~--~~~~~~~~Dl~d~~~~~~~~~----~~~d~vih~a~~~~~~~~~~~~~n~~~   88 (286)
T 3gpi_A           22 LTAQGHEVTGLRRSAQP-------MP--AGVQTLIADVTRPDTLASIVH----LRPEILVYCVAASEYSDEHYRLSYVEG   88 (286)
T ss_dssp             HHHTTCCEEEEECTTSC-------CC--TTCCEEECCTTCGGGCTTGGG----GCCSEEEECHHHHHHC-----CCSHHH
T ss_pred             HHHCCCEEEEEeCCccc-------cc--cCCceEEccCCChHHHHHhhc----CCCCEEEEeCCCCCCCHHHHHHHHHHH
Confidence            67889999999998654       22  268889999999999888777    469999999997432112222333333


Q ss_pred             HHHhhheeec--ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           82 VKRVMIMVVF--LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        82 ~~~~~~~n~~--~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ..+.++.-..  .+++|++||...+...           .+...|+.+|.+.+.+ +..        ++++.++|+.+.+
T Consensus        89 ~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~-~~~--------~~~~ilR~~~v~G  159 (286)
T 3gpi_A           89 LRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL-LAA--------YSSTILRFSGIYG  159 (286)
T ss_dssp             HHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-GGG--------SSEEEEEECEEEB
T ss_pred             HHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-Hhc--------CCeEEEecccccC
Confidence            3333332222  3689999997654321           2356899999999887 432        7899999999987


Q ss_pred             ccc
Q 042200          149 PFF  151 (181)
Q Consensus       149 ~~~  151 (181)
                      +..
T Consensus       160 ~~~  162 (286)
T 3gpi_A          160 PGR  162 (286)
T ss_dssp             TTB
T ss_pred             CCc
Confidence            753

>4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis}

Probab=99.12  E-value=6.9e-10  Score=88.94  Aligned_cols=138  Identities=13%  Similarity=0.136  Sum_probs=89.5

Q ss_pred             cccC---CCEEEEeecchHHH---HHHHhHcCC-------------CCceEEEeeecC------ChhHHHHHHHhcccCC
Q 042200            2 FIQH---RAKVIIADVQDDLC---RALCKEFDS-------------DELISYVCCNVT------IDSDVKNVFDFTKFGK   56 (181)
Q Consensus         2 l~~~---G~~Vv~~~r~~~~~---~~~~~~~~~-------------~~~~~~~~~D~~------~~~~i~~~~~~~~~~~   56 (181)
                      |+++   |++|++++|+.+..   +++.+.+..             ..++.++.+|++      +.+++..+++     +
T Consensus        93 Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~-----~  167 (478)
T 4dqv_A           93 LLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSEPDLGLDQPMWRRLAE-----T  167 (478)
T ss_dssp             HHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHH-----H
T ss_pred             HHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCCcccCCCHHHHHHHHc-----C
Confidence            5566   89999999975433   222222221             037999999999      5567777776     4


Q ss_pred             ccEEEEcccccCCCCCCccc---CCHHHHHHhhheeec--ceeEEEeccccccccCcc----------------------
Q 042200           57 LDIMFNNAGIISNMDRTTLD---TDNEKVKRVMIMVVF--LGVLLFTANLATETIGEA----------------------  109 (181)
Q Consensus        57 id~vi~~ag~~~~~~~~~~~---~~~~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~----------------------  109 (181)
                      +|+||||||....  ....+   .......+.++....  .+++|++||.+.+.....                      
T Consensus       168 ~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~~E~~~~~p~~~~~~~~~~~  245 (478)
T 4dqv_A          168 VDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAFTEDADIRVISPTRTVDGGW  245 (478)
T ss_dssp             CCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTCCSSSCHHHHCCEEECCTTS
T ss_pred             CCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCcCCcccccccCccccccccc
Confidence            8999999997643  21111   111111111111111  358999999654322110                      


Q ss_pred             chhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          110 LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       110 ~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ...|+.+|.+.+.+++.++.+.   |++++.++||.|.++
T Consensus       246 ~~~Y~~sK~~~E~~~~~~~~~~---gi~~~ivRpg~v~G~  282 (478)
T 4dqv_A          246 AGGYGTSKWAGEVLLREANDLC---ALPVAVFRCGMILAD  282 (478)
T ss_dssp             EECHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECC
T ss_pred             ccchHHHHHHHHHHHHHHHHHh---CCCeEEEECceeeCC
Confidence            1339999999999999998876   799999999999876

>1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A*

Probab=99.12  E-value=5.1e-11  Score=89.48  Aligned_cols=116  Identities=11%  Similarity=0.028  Sum_probs=83.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+ +|++|++++|+..                .+.+|++|.+++.++++.   .++|+|||+||....  .    ...++
T Consensus        20 L~-~g~~V~~~~r~~~----------------~~~~D~~d~~~~~~~~~~---~~~d~vih~a~~~~~--~----~~~~~   73 (299)
T 1n2s_A           20 LA-PVGNLIALDVHSK----------------EFCGDFSNPKGVAETVRK---LRPDVIVNAAAHTAV--D----KAESE   73 (299)
T ss_dssp             TT-TTSEEEEECTTCS----------------SSCCCTTCHHHHHHHHHH---HCCSEEEECCCCCCH--H----HHTTC
T ss_pred             hh-cCCeEEEeccccc----------------cccccCCCHHHHHHHHHh---cCCCEEEECcccCCH--h----hhhcC
Confidence            55 6888888888651                357899999999998884   158999999996532  1    11122


Q ss_pred             HHHhhheeec------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           82 VKRVMIMVVF------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        82 ~~~~~~~n~~------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +...+++|+.            +.++|++||...+.+.           .+...|+.+|.+.+.+++.++.       ++
T Consensus        74 ~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~  146 (299)
T 1n2s_A           74 PELAQLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQDNCP-------KH  146 (299)
T ss_dssp             HHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHHHCS-------SE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCcEEEEecccEEeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHhCC-------Ce
Confidence            3444455544            3489999997654322           1256899999999999887643       78


Q ss_pred             EEEecCcccCcc
Q 042200          139 NSIAHIVSATPF  150 (181)
Q Consensus       139 ~~i~Pg~v~t~~  150 (181)
                      +.++|+.+.++.
T Consensus       147 ~ilRp~~v~G~~  158 (299)
T 1n2s_A          147 LIFRTSWVYAGK  158 (299)
T ss_dssp             EEEEECSEECSS
T ss_pred             EEEeeeeecCCC
Confidence            999999998875

>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0

Probab=99.11  E-value=5.9e-11  Score=88.68  Aligned_cols=99  Identities=14%  Similarity=0.057  Sum_probs=71.8

Q ss_pred             eeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec------------ceeEEEeccccc
Q 042200           36 CCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------LGVLLFTANLAT  103 (181)
Q Consensus        36 ~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------~~~iv~iss~~~  103 (181)
                      .+|++|.+++.++++.   .++|+|||+||....  .    ...+++...+++|+.            +.++|++||...
T Consensus        39 ~~D~~d~~~~~~~~~~---~~~d~vi~~a~~~~~--~----~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~~v  109 (287)
T 3sc6_A           39 LLDITNISQVQQVVQE---IRPHIIIHCAAYTKV--D----QAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTDYV  109 (287)
T ss_dssp             TSCTTCHHHHHHHHHH---HCCSEEEECCCCCCH--H----HHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGG
T ss_pred             ccCCCCHHHHHHHHHh---cCCCEEEECCcccCh--H----HHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchhhh
Confidence            4799999999999984   258999999997643  1    111334555555554            458999999765


Q ss_pred             cccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          104 ETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       104 ~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +.+.           .+...|+.+|.+.+.+++.++.       +.+.++|+.+.++.
T Consensus       110 y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~-------~~~ilR~~~v~G~~  160 (287)
T 3sc6_A          110 FQGDRPEGYDEFHNPAPINIYGASKYAGEQFVKELHN-------KYFIVRTSWLYGKY  160 (287)
T ss_dssp             SCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHCS-------SEEEEEECSEECSS
T ss_pred             cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-------CcEEEeeeeecCCC
Confidence            4321           2356899999999999887654       45789999998764

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=99.09  E-value=1.7e-10  Score=85.96  Aligned_cols=122  Identities=6%  Similarity=0.070  Sum_probs=83.1

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++  |++|++++|+.++.+....     ..+.++.+|++|.+++.++++     ++|+|||+||....  .     ..
T Consensus        19 L~~~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~~~~~~~~-----~~d~vi~~a~~~~~--~-----~~   81 (286)
T 2zcu_A           19 LMKTVPASQIVAIVRNPAKAQALAA-----QGITVRQADYGDEAALTSALQ-----GVEKLLLISSSEVG--Q-----RA   81 (286)
T ss_dssp             HTTTSCGGGEEEEESCTTTCHHHHH-----TTCEEEECCTTCHHHHHHHTT-----TCSEEEECC---------------
T ss_pred             HHhhCCCceEEEEEcChHhhhhhhc-----CCCeEEEcCCCCHHHHHHHHh-----CCCEEEEeCCCCch--H-----HH
Confidence            5666  9999999998765543322     157889999999999988887     37999999995311  1     11


Q ss_pred             HHHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           80 EKVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        80 ~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +...+.++.-..  .+++|++||....   +....|+.+|.+.+.+++.       .|++++.++||.+.+++
T Consensus        82 ~~~~~l~~a~~~~~~~~~v~~Ss~~~~---~~~~~y~~sK~~~e~~~~~-------~~~~~~ilrp~~~~~~~  144 (286)
T 2zcu_A           82 PQHRNVINAAKAAGVKFIAYTSLLHAD---TSPLGLADEHIETEKMLAD-------SGIVYTLLRNGWYSENY  144 (286)
T ss_dssp             CHHHHHHHHHHHHTCCEEEEEEETTTT---TCCSTTHHHHHHHHHHHHH-------HCSEEEEEEECCBHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEECCCCCC---CCcchhHHHHHHHHHHHHH-------cCCCeEEEeChHHhhhh
Confidence            112222221111  3689999997664   2335799999999988763       38999999999877654

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=99.07  E-value=2.7e-10  Score=84.98  Aligned_cols=124  Identities=9%  Similarity=0.057  Sum_probs=85.5

Q ss_pred             cccC--CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQH--RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~--G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++  |++|++++|+.++.+....     ..+.++.+|++|.+++.++++     ++|+|||+||...   ..  +...
T Consensus        20 L~~~~~g~~V~~~~r~~~~~~~l~~-----~~~~~~~~D~~d~~~l~~~~~-----~~d~vi~~a~~~~---~~--~~n~   84 (287)
T 2jl1_A           20 LLKKVPASQIIAIVRNVEKASTLAD-----QGVEVRHGDYNQPESLQKAFA-----GVSKLLFISGPHY---DN--TLLI   84 (287)
T ss_dssp             HTTTSCGGGEEEEESCTTTTHHHHH-----TTCEEEECCTTCHHHHHHHTT-----TCSEEEECCCCCS---CH--HHHH
T ss_pred             HHHhCCCCeEEEEEcCHHHHhHHhh-----cCCeEEEeccCCHHHHHHHHh-----cCCEEEEcCCCCc---Cc--hHHH
Confidence            5677  9999999998765544322     157889999999999988887     3899999999531   10  0011


Q ss_pred             HHHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           80 EKVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        80 ~~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ....+.++.-..  .+++|++||....   .....|+.+|.+.+.+++.       .|++++.++||.+.+++
T Consensus        85 ~~~~~l~~a~~~~~~~~~v~~Ss~~~~---~~~~~y~~~K~~~E~~~~~-------~~~~~~ilrp~~~~~~~  147 (287)
T 2jl1_A           85 VQHANVVKAARDAGVKHIAYTGYAFAE---ESIIPLAHVHLATEYAIRT-------TNIPYTFLRNALYTDFF  147 (287)
T ss_dssp             HHHHHHHHHHHHTTCSEEEEEEETTGG---GCCSTHHHHHHHHHHHHHH-------TTCCEEEEEECCBHHHH
T ss_pred             HHHHHHHHHHHHcCCCEEEEECCCCCC---CCCCchHHHHHHHHHHHHH-------cCCCeEEEECCEecccc
Confidence            111222211111  3589999997654   2235799999999988753       48999999999887654

>4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens}

Probab=99.07  E-value=5.1e-10  Score=84.25  Aligned_cols=136  Identities=7%  Similarity=0.015  Sum_probs=91.6

Q ss_pred             CCCEEEEeecchHHHHHHHhHcCCC--------CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            5 HRAKVIIADVQDDLCRALCKEFDSD--------ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         5 ~G~~Vv~~~r~~~~~~~~~~~~~~~--------~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      .+-+|++++-+---...+++.+...        ..+..+.+|++|.+++.++++.   .++|+|||+||....  ...  
T Consensus         5 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~~~~~~~~~D~~d~~~~~~~~~~---~~~d~Vih~A~~~~~--~~~--   77 (319)
T 4b8w_A            5 QSMRILVTGGSGLVGKAIQKVVADGAGLPGEDWVFVSSKDADLTDTAQTRALFEK---VQPTHVIHLAAMVGG--LFR--   77 (319)
T ss_dssp             CCCEEEEETCSSHHHHHHHHHHHTTTCCTTCEEEECCTTTCCTTSHHHHHHHHHH---SCCSEEEECCCCCCC--HHH--
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHhcCCcccccccccCceecccCCHHHHHHHHhh---cCCCEEEECceeccc--ccc--
Confidence            3456778877654444444444221        2334457899999999999984   358999999997532  111  


Q ss_pred             CCHHHHHHhhheeec-------------ceeEEEecccccccc----------------CccchhhHhhHHHHHHHHHHH
Q 042200           77 TDNEKVKRVMIMVVF-------------LGVLLFTANLATETI----------------GEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~----------------~~~~~~y~~sK~a~~~l~~~l  127 (181)
                       ..++....+++|+.             .+++|++||...+..                .+....|+.+|.+.+.+++.+
T Consensus        78 -~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~E~~~~~~  156 (319)
T 4b8w_A           78 -NIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNGPPHNSNFGYSYAKRMIDVQNRAY  156 (319)
T ss_dssp             -HTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBSCCCSSSHHHHHHHHHHHHHHHHH
T ss_pred             -cccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccCCCCCCcchHHHHHHHHHHHHHHH
Confidence             11222334444443             358999999755321                112225999999999999999


Q ss_pred             HHHhcCCCeEEEEEecCcccCccc
Q 042200          128 CVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      +.+.   |++++.++|+.+.++..
T Consensus       157 ~~~~---~~~~~ilRp~~v~Gp~~  177 (319)
T 4b8w_A          157 FQQY---GCTFTAVIPTNVFGPHD  177 (319)
T ss_dssp             HHHH---CCEEEEEEECEEECTTC
T ss_pred             HHhh---CCCEEEEeeccccCCCC
Confidence            8887   79999999999988753

>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}

Probab=99.06  E-value=3.5e-10  Score=91.19  Aligned_cols=138  Identities=9%  Similarity=-0.006  Sum_probs=88.5

Q ss_pred             cccCCCEEEEeecchHH---HHHHHh---H---------cCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRAKVIIADVQDDL---CRALCK---E---------FDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~---~~~~~~---~---------~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |.+.|++|++++|+...   ..+..+   .         ..  .++.++.+|+++.+++.   .   ..++|+||||||.
T Consensus       170 L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~--~~v~~v~~Dl~d~~~l~---~---~~~~D~Vih~Aa~  241 (508)
T 4f6l_B          170 LQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMML--SNIEVIVGDFECMDDVV---L---PENMDTIIHAGAR  241 (508)
T ss_dssp             TBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHS--TTEEEEEEBTTBCSSCC---C---SSCCSEEEECCCC
T ss_pred             HHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhcc--CceEEEecCCcccccCC---C---ccCCCEEEECCce
Confidence            67789999999998652   222211   1         12  37999999999988777   1   2469999999997


Q ss_pred             cCCCCCC---cccCCHHHHHHhhheeec-ceeEEEeccccc--ccc----------------CccchhhHhhHHHHHHHH
Q 042200           67 ISNMDRT---TLDTDNEKVKRVMIMVVF-LGVLLFTANLAT--ETI----------------GEALYDYLMSKYAVLGLM  124 (181)
Q Consensus        67 ~~~~~~~---~~~~~~~~~~~~~~~n~~-~~~iv~iss~~~--~~~----------------~~~~~~y~~sK~a~~~l~  124 (181)
                      .... ..   +.........+.++.... .+++|++||...  ...                ..+...|+.+|.+.+.++
T Consensus       242 ~~~~-~~~~~~~~~Nv~gt~~ll~~a~~~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~~~~~~~~~Y~~sK~~~E~~~  320 (508)
T 4f6l_B          242 TDHF-GDDDEFEKVNVQGTVDVIRLAQQHHARLIYVSTISVGTYFDIDTEDVTFSEADVYKGQLLTSPYTRSKFYSELKV  320 (508)
T ss_dssp             ---------CCHHHHHHHHHHHHHHHHTTTCEEEEEEESCTTSEECTTCSCCEECTTCSCSSBCCCSHHHHHHHHHHHHH
T ss_pred             ecCC-CCHHHHhhhHHHHHHHHHHHHHhCCCcEEEeCChhhccCCccCCcCcccccccccccccCCCcHHHHHHHHHHHH
Confidence            5421 11   111111111222211111 578999999776  100                114578999999999999


Q ss_pred             HHHHHHhcCCCeEEEEEecCcccCcccc
Q 042200          125 KNLCVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       125 ~~la~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      +.++.    .|++++.++||.+.++...
T Consensus       321 ~~~~~----~gi~~~ilRp~~v~G~~~~  344 (508)
T 4f6l_B          321 LEAVN----NGLDGRIVRVGNLTSPYNG  344 (508)
T ss_dssp             HHHHH----TTCEEEEEEECCEESCSSS
T ss_pred             HHHHH----cCCCEEEEecceeccCCCC
Confidence            87653    4899999999999987543

>2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii}

Probab=99.03  E-value=1.1e-10  Score=86.46  Aligned_cols=102  Identities=11%  Similarity=0.019  Sum_probs=75.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+ +|++|++++|+.+.     .   .  .   +.+|++|.+++.++++.   .++|+||||||....      ..+.++
T Consensus        20 L~-~g~~V~~~~r~~~~-----~---~--~---~~~Dl~~~~~~~~~~~~---~~~d~vi~~a~~~~~------~~~~~~   76 (273)
T 2ggs_A           20 LS-ERHEVIKVYNSSEI-----Q---G--G---YKLDLTDFPRLEDFIIK---KRPDVIINAAAMTDV------DKCEIE   76 (273)
T ss_dssp             HT-TTSCEEEEESSSCC-----T---T--C---EECCTTSHHHHHHHHHH---HCCSEEEECCCCCCH------HHHHHC
T ss_pred             Hh-cCCeEEEecCCCcC-----C---C--C---ceeccCCHHHHHHHHHh---cCCCEEEECCcccCh------hhhhhC
Confidence            45 48999999997631     1   1  2   78999999999999884   158999999996532      123345


Q ss_pred             HHHhhheeec------------ceeEEEeccccccccCc----------cchhhHhhHHHHHHHHHH
Q 042200           82 VKRVMIMVVF------------LGVLLFTANLATETIGE----------ALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        82 ~~~~~~~n~~------------~~~iv~iss~~~~~~~~----------~~~~y~~sK~a~~~l~~~  126 (181)
                      ++..+++|+.            ++++|++||...+.+.+          +...|+.+|.+++.+++.
T Consensus        77 ~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~~  143 (273)
T 2ggs_A           77 KEKAYKINAEAVRHIVRAGKVIDSYIVHISTDYVFDGEKGNYKEEDIPNPINYYGLSKLLGETFALQ  143 (273)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGGGSCSSSCSBCTTSCCCCSSHHHHHHHHHHHHHCC
T ss_pred             HHHHHHHhHHHHHHHHHHHHHhCCeEEEEecceeEcCCCCCcCCCCCCCCCCHHHHHHHHHHHHHhC
Confidence            6667777766            46899999987764432          356899999999998876

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=99.01  E-value=6.3e-10  Score=83.60  Aligned_cols=131  Identities=8%  Similarity=-0.038  Sum_probs=84.9

Q ss_pred             cccCC-CEEEEeecchHHHHH-HHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHR-AKVIIADVQDDLCRA-LCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++| ++|++++|+.++... ....    ..+.++.+|++|.+++.++++     ++|+|||++|....  ... +...
T Consensus        25 L~~~g~~~V~~~~R~~~~~~~~~l~~----~~~~~~~~D~~d~~~l~~~~~-----~~d~vi~~a~~~~~--~~~-~~~~   92 (299)
T 2wm3_A           25 LLEDGTFKVRVVTRNPRKKAAKELRL----QGAEVVQGDQDDQVIMELALN-----GAYATFIVTNYWES--CSQ-EQEV   92 (299)
T ss_dssp             HHHHCSSEEEEEESCTTSHHHHHHHH----TTCEEEECCTTCHHHHHHHHT-----TCSEEEECCCHHHH--TCH-HHHH
T ss_pred             HHhcCCceEEEEEcCCCCHHHHHHHH----CCCEEEEecCCCHHHHHHHHh-----cCCEEEEeCCCCcc--ccc-hHHH
Confidence            56778 999999998654321 1111    157889999999999998887     38999999986422  110 0001


Q ss_pred             HHHHHhhheeec--ceeEEEeccccccccC---ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccc
Q 042200           80 EKVKRVMIMVVF--LGVLLFTANLATETIG---EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus        80 ~~~~~~~~~n~~--~~~iv~iss~~~~~~~---~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      ....+.++.-..  .++||++|+.. ..+.   .....|+.+|.+++.+++.       .|++++.++||.+.+++..
T Consensus        93 ~~~~~~~~aa~~~gv~~iv~~S~~~-~~~~~~~~~~~~y~~sK~~~e~~~~~-------~gi~~~ilrp~~~~~~~~~  162 (299)
T 2wm3_A           93 KQGKLLADLARRLGLHYVVYSGLEN-IKKLTAGRLAAAHFDGKGEVEEYFRD-------IGVPMTSVRLPCYFENLLS  162 (299)
T ss_dssp             HHHHHHHHHHHHHTCSEEEECCCCC-HHHHTTTSCCCHHHHHHHHHHHHHHH-------HTCCEEEEECCEEGGGGGT
T ss_pred             HHHHHHHHHHHHcCCCEEEEEcCcc-ccccCCCcccCchhhHHHHHHHHHHH-------CCCCEEEEeecHHhhhchh
Confidence            111122211111  35889866543 3221   2246799999999988764       2799999999998887543

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=98.98  E-value=2e-09  Score=83.04  Aligned_cols=128  Identities=9%  Similarity=-0.053  Sum_probs=85.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeee-cCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCN-VTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D-~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.++...  ..+.....+.++.+| ++|.+++.++++     .+|+||||++....  ..    ...
T Consensus        25 L~~~g~~V~~~~R~~~~~~~--~~l~~~~~v~~v~~D~l~d~~~l~~~~~-----~~d~Vi~~a~~~~~--~~----~~~   91 (352)
T 1xgk_A           25 AAAVGHHVRAQVHSLKGLIA--EELQAIPNVTLFQGPLLNNVPLMDTLFE-----GAHLAFINTTSQAG--DE----IAI   91 (352)
T ss_dssp             HHHTTCCEEEEESCSCSHHH--HHHHTSTTEEEEESCCTTCHHHHHHHHT-----TCSEEEECCCSTTS--CH----HHH
T ss_pred             HHhCCCEEEEEECCCChhhH--HHHhhcCCcEEEECCccCCHHHHHHHHh-----cCCEEEEcCCCCCc--HH----HHH
Confidence            56789999999998654421  111111258889999 999999998887     37999999985421  11    011


Q ss_pred             HHHHhhheeec-c--eeEEEecccc-ccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           81 KVKRVMIMVVF-L--GVLLFTANLA-TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        81 ~~~~~~~~n~~-~--~~iv~iss~~-~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                       -.+.++.-.. +  +++|++||.. +..+.++...|+.+|.+++.+++.+       |++++.|+||.+.+..
T Consensus        92 -~~~l~~aa~~~g~v~~~V~~SS~~~~~~~~~~~~~y~~sK~~~E~~~~~~-------gi~~~ivrpg~~g~~~  157 (352)
T 1xgk_A           92 -GKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQL-------GLPSTFVYAGIYNNNF  157 (352)
T ss_dssp             -HHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHTS-------SSCEEEEEECEEGGGC
T ss_pred             -HHHHHHHHHHcCCccEEEEeCCccccccCCCCCccHHHHHHHHHHHHHHc-------CCCEEEEecceecCCc
Confidence             1222221111 2  5899999976 3444445578999999999888652       8999999999765443

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=98.97  E-value=3.5e-09  Score=78.91  Aligned_cols=123  Identities=7%  Similarity=-0.112  Sum_probs=84.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+..+......     ..+.++.+|++|.+          +.++|+|||+||....  .   ......
T Consensus        24 L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~D~~d~~----------~~~~d~vi~~a~~~~~--~---~~~~~~   83 (286)
T 3ius_A           24 LAPQGWRIIGTSRNPDQMEAIRA-----SGAEPLLWPGEEPS----------LDGVTHLLISTAPDSG--G---DPVLAA   83 (286)
T ss_dssp             HGGGTCEEEEEESCGGGHHHHHH-----TTEEEEESSSSCCC----------CTTCCEEEECCCCBTT--B---CHHHHH
T ss_pred             HHHCCCEEEEEEcChhhhhhHhh-----CCCeEEEecccccc----------cCCCCEEEECCCcccc--c---cHHHHH
Confidence            67889999999999876655433     26889999999943          2468999999997643  1   011112


Q ss_pred             HHHhhhee-ecceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           82 VKRVMIMV-VFLGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        82 ~~~~~~~n-~~~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      +.+.+... -..+++|++||...+...           .+...|+.+|.+.+.+++.+      .|++++.++|+.+.++
T Consensus        84 l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~------~~~~~~ilRp~~v~G~  157 (286)
T 3ius_A           84 LGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAV------PNLPLHVFRLAGIYGP  157 (286)
T ss_dssp             HHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHHHS------TTCCEEEEEECEEEBT
T ss_pred             HHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHHhh------cCCCEEEEeccceECC
Confidence            22222111 113689999987544221           23457999999999988776      5899999999999876


Q ss_pred             c
Q 042200          150 F  150 (181)
Q Consensus       150 ~  150 (181)
                      .
T Consensus       158 ~  158 (286)
T 3ius_A          158 G  158 (286)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}

Probab=98.95  E-value=1.2e-10  Score=88.00  Aligned_cols=90  Identities=8%  Similarity=-0.046  Sum_probs=59.8

Q ss_pred             CccEEEEcccccCCCCCCcccCCHHHHH-Hhhheeec-------ceeEEEeccccccccC-----------ccchhhHhh
Q 042200           56 KLDIMFNNAGIISNMDRTTLDTDNEKVK-RVMIMVVF-------LGVLLFTANLATETIG-----------EALYDYLMS  116 (181)
Q Consensus        56 ~id~vi~~ag~~~~~~~~~~~~~~~~~~-~~~~~n~~-------~~~iv~iss~~~~~~~-----------~~~~~y~~s  116 (181)
                      ++|+|||+||....  ......+.+.++ -....|+.       .+++|++||...+...           .+...|+.+
T Consensus        69 ~~d~vi~~a~~~~~--~~~~~~~~~~~~n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p~~~Y~~s  146 (321)
T 3vps_A           69 DVRLVYHLASHKSV--PRSFKQPLDYLDNVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSPRSPYAAS  146 (321)
T ss_dssp             TEEEEEECCCCCCH--HHHTTSTTTTHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHHH
T ss_pred             cCCEEEECCccCCh--HHHHhCHHHHHHHHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCCCChhHHH
Confidence            58999999997642  111111111111 11111222       3689999997654321           235789999


Q ss_pred             HHHHHHHHHHHHHHhcCCCe-EEEEEecCcccCcc
Q 042200          117 KYAVLGLMKNLCVELGQYDI-RVNSIAHIVSATPF  150 (181)
Q Consensus       117 K~a~~~l~~~la~~~~~~~i-~v~~i~Pg~v~t~~  150 (181)
                      |.+.+.+++.++.+.   |+ +++.++|+.+.++.
T Consensus       147 K~~~E~~~~~~~~~~---~~~~~~ilRp~~v~G~~  178 (321)
T 3vps_A          147 KVGLEMVAGAHQRAS---VAPEVGIVRFFNVYGPG  178 (321)
T ss_dssp             HHHHHHHHHHHHHSS---SSCEEEEEEECEEECTT
T ss_pred             HHHHHHHHHHHHHHc---CCCceEEEEeccccCcC
Confidence            999999999988765   78 99999999999875

>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A

Probab=98.83  E-value=3.9e-08  Score=75.98  Aligned_cols=132  Identities=12%  Similarity=0.082  Sum_probs=90.2

Q ss_pred             EEEEeecchHHHHHHHhHcCCCCceEEEeeec-CChhHHHHHHHhcccCCccEEEEcccccCCC-CCCcccCCHHHHHHh
Q 042200            8 KVIIADVQDDLCRALCKEFDSDELISYVCCNV-TIDSDVKNVFDFTKFGKLDIMFNNAGIISNM-DRTTLDTDNEKVKRV   85 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~-~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~-~~~~~~~~~~~~~~~   85 (181)
                      +|++++-+---...+++.+...+.+.++.+|. +|.+++.++++.     +|+|||+||..... +..+.+.......+.
T Consensus         2 ~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~~d~~~l~~~~~~-----~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l   76 (369)
T 3st7_A            2 NIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEELESALLK-----ADFIVHLAGVNRPEHDKEFSLGNVSYLDHV   76 (369)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHCCCEEEECCTTCCHHHHHHHHHH-----CSEEEECCCSBCTTCSTTCSSSCCBHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHhcc-----CCEEEECCcCCCCCCHHHHHHHHHHHHHHH
Confidence            46677666555555555553322347888999 999999999883     89999999976541 011112222222222


Q ss_pred             hheeec---ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200           86 MIMVVF---LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus        86 ~~~n~~---~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ++.-..   ..++|++||.....    ...|+.+|.+.+.+++.++.+.   |+++..++|+.+..+..
T Consensus        77 ~~a~~~~~~~~~~v~~Ss~~~~~----~~~Y~~sK~~~E~~~~~~~~~~---g~~~~i~R~~~v~G~~~  138 (369)
T 3st7_A           77 LDILTRNTKKPAILLSSSIQATQ----DNPYGESKLQGEQLLREYAEEY---GNTVYIYRWPNLFGKWC  138 (369)
T ss_dssp             HHHHTTCSSCCEEEEEEEGGGGS----CSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTTC
T ss_pred             HHHHHHhCCCCeEEEeCchhhcC----CCCchHHHHHHHHHHHHHHHHh---CCCEEEEECCceeCCCC
Confidence            222111   24899999976654    5789999999999999998887   79999999999988753

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=98.79  E-value=2.8e-08  Score=74.87  Aligned_cols=129  Identities=9%  Similarity=0.035  Sum_probs=80.3

Q ss_pred             cccCCCEEEEeecch-----HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQD-----DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-----~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+.     ++.+.. ..+.. ..+.++.+|++|.+++.++++     ++|+|||++|....  ..-..
T Consensus        24 L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~~-~~~~~~~~D~~d~~~l~~~~~-----~~d~vi~~a~~~~~--~~~~~   94 (313)
T 1qyd_A           24 SISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ-LGAKLIEASLDDHQRLVDALK-----QVDVVISALAGGVL--SHHIL   94 (313)
T ss_dssp             HHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT-TTCEEECCCSSCHHHHHHHHT-----TCSEEEECCCCSSS--STTTT
T ss_pred             HHhCCCcEEEEECCCcccchhHHHHH-HHHHh-CCeEEEeCCCCCHHHHHHHHh-----CCCEEEECCccccc--hhhHH
Confidence            678899999999983     333332 22211 268899999999999998887     38999999997643  21111


Q ss_pred             CCHHHHHHhhhee-ecceeEEEecccccccc------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           77 TDNEKVKRVMIMV-VFLGVLLFTANLATETI------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        77 ~~~~~~~~~~~~n-~~~~~iv~iss~~~~~~------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ....-++...+.. +  +++|+ |+......      .+....| .+|.+++.+++.       .|++++.++||++.+.
T Consensus        95 ~~~~l~~aa~~~g~v--~~~v~-S~~g~~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~g~~~~ilrp~~~~~~  163 (313)
T 1qyd_A           95 EQLKLVEAIKEAGNI--KRFLP-SEFGMDPDIMEHALQPGSITF-IDKRKVRRAIEA-------ASIPYTYVSSNMFAGY  163 (313)
T ss_dssp             THHHHHHHHHHSCCC--SEEEC-SCCSSCTTSCCCCCSSTTHHH-HHHHHHHHHHHH-------TTCCBCEEECCEEHHH
T ss_pred             HHHHHHHHHHhcCCC--ceEEe-cCCcCCccccccCCCCCcchH-HHHHHHHHHHHh-------cCCCeEEEEeceeccc
Confidence            1111122222222 2  36664 43321111      1334568 999998887752       3788999999887654


Q ss_pred             c
Q 042200          150 F  150 (181)
Q Consensus       150 ~  150 (181)
                      +
T Consensus       164 ~  164 (313)
T 1qyd_A          164 F  164 (313)
T ss_dssp             H
T ss_pred             c
Confidence            3

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=98.76  E-value=2.8e-08  Score=74.68  Aligned_cols=126  Identities=8%  Similarity=0.084  Sum_probs=80.3

Q ss_pred             cccCCCEEEEeecch-------HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQD-------DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~-------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|++++|+.       ++.+.. ..+.. ..+.++.+|++|.+++.++++     ++|+|||++|....     
T Consensus        22 L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~-~~v~~v~~D~~d~~~l~~~~~-----~~d~vi~~a~~~~~-----   89 (307)
T 2gas_A           22 SIKAGNPTYALVRKTITAANPETKEELI-DNYQS-LGVILLEGDINDHETLVKAIK-----QVDIVICAAGRLLI-----   89 (307)
T ss_dssp             HHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH-TTCEEEECCTTCHHHHHHHHT-----TCSEEEECSSSSCG-----
T ss_pred             HHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh-CCCEEEEeCCCCHHHHHHHHh-----CCCEEEECCccccc-----
Confidence            677899999999986       444432 22211 258889999999999998887     38999999996421     


Q ss_pred             ccCCHHHHHHhhhee-ecceeEEEecccccc-----ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           75 LDTDNEKVKRVMIMV-VFLGVLLFTANLATE-----TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n-~~~~~iv~iss~~~~-----~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                       .....-++...+.. +  +++| .|+....     ...|....| .+|.+++.+++.       .|++++.++||++.+
T Consensus        90 -~~~~~l~~aa~~~g~v--~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~i~~~~lrp~~~~~  157 (307)
T 2gas_A           90 -EDQVKIIKAIKEAGNV--KKFF-PSEFGLDVDRHDAVEPVRQVF-EEKASIRRVIEA-------EGVPYTYLCCHAFTG  157 (307)
T ss_dssp             -GGHHHHHHHHHHHCCC--SEEE-CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEETT
T ss_pred             -ccHHHHHHHHHhcCCc--eEEe-ecccccCcccccCCCcchhHH-HHHHHHHHHHHH-------cCCCeEEEEcceeec
Confidence             11111122222221 2  3565 3432211     112334578 999998887753       278999999998887


Q ss_pred             ccc
Q 042200          149 PFF  151 (181)
Q Consensus       149 ~~~  151 (181)
                      .+.
T Consensus       158 ~~~  160 (307)
T 2gas_A          158 YFL  160 (307)
T ss_dssp             TTG
T ss_pred             ccc
Confidence            654

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=98.74  E-value=6.4e-08  Score=74.16  Aligned_cols=128  Identities=13%  Similarity=0.061  Sum_probs=83.9

Q ss_pred             cccCCCEEEEeecch----HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD----DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |++.|++|++++|+.    ++.+.. ..+.. ..+.++.+|++|.+++.+++++   .++|+|||++|....      ..
T Consensus        30 L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~-~~v~~~~~Dl~d~~~l~~~~~~---~~~d~Vi~~a~~~n~------~~   98 (346)
T 3i6i_A           30 SLDAHRPTYILARPGPRSPSKAKIF-KALED-KGAIIVYGLINEQEAMEKILKE---HEIDIVVSTVGGESI------LD   98 (346)
T ss_dssp             HHHTTCCEEEEECSSCCCHHHHHHH-HHHHH-TTCEEEECCTTCHHHHHHHHHH---TTCCEEEECCCGGGG------GG
T ss_pred             HHHCCCCEEEEECCCCCChhHHHHH-HHHHh-CCcEEEEeecCCHHHHHHHHhh---CCCCEEEECCchhhH------HH
Confidence            678899999999976    344322 22211 2688999999999999999985   358999999997422      11


Q ss_pred             CHHHHHHhhhee-ecceeEEEeccccccc----cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           78 DNEKVKRVMIMV-VFLGVLLFTANLATET----IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        78 ~~~~~~~~~~~n-~~~~~iv~iss~~~~~----~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +..-++...+.. +  .++|. |+.....    +.++...|+.+|.+++.+++.       .|++++.++||.+.+.+
T Consensus        99 ~~~l~~aa~~~g~v--~~~v~-S~~g~~~~e~~~~~p~~~y~~sK~~~e~~l~~-------~g~~~tivrpg~~~g~~  166 (346)
T 3i6i_A           99 QIALVKAMKAVGTI--KRFLP-SEFGHDVNRADPVEPGLNMYREKRRVRQLVEE-------SGIPFTYICCNSIASWP  166 (346)
T ss_dssp             HHHHHHHHHHHCCC--SEEEC-SCCSSCTTTCCCCTTHHHHHHHHHHHHHHHHH-------TTCCBEEEECCEESSCC
T ss_pred             HHHHHHHHHHcCCc--eEEee-cccCCCCCccCcCCCcchHHHHHHHHHHHHHH-------cCCCEEEEEeccccccc
Confidence            111122222222 1  24553 4432221    124567899999998887764       47999999999887754

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=98.66  E-value=4.8e-08  Score=72.86  Aligned_cols=126  Identities=13%  Similarity=0.091  Sum_probs=78.7

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |++. |++|++++|+.++.....   .  ..+.++.+|++|.+++.++++     ++|+|||+||....  ..   ...+
T Consensus        20 L~~~~g~~V~~~~R~~~~~~~~~---~--~~v~~~~~D~~d~~~l~~~~~-----~~d~vi~~a~~~~~--~~---~~~~   84 (289)
T 3e48_A           20 AIANHIDHFHIGVRNVEKVPDDW---R--GKVSVRQLDYFNQESMVEAFK-----GMDTVVFIPSIIHP--SF---KRIP   84 (289)
T ss_dssp             HHHTTCTTEEEEESSGGGSCGGG---B--TTBEEEECCTTCHHHHHHHTT-----TCSEEEECCCCCCS--HH---HHHH
T ss_pred             HhhCCCCcEEEEECCHHHHHHhh---h--CCCEEEEcCCCCHHHHHHHHh-----CCCEEEEeCCCCcc--ch---hhHH
Confidence            4555 899999999877543221   1  368899999999999998887     48999999997543  10   1112


Q ss_pred             HHHHhhheeec--ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200           81 KVKRVMIMVVF--LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus        81 ~~~~~~~~n~~--~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      ...+.++.-..  .++||++||......    ..|..++...  +++..   +...|++++.++||.+.+++.
T Consensus        85 ~~~~l~~aa~~~gv~~iv~~Ss~~~~~~----~~~~~~~~~~--~~e~~---~~~~g~~~~ilrp~~~~~~~~  148 (289)
T 3e48_A           85 EVENLVYAAKQSGVAHIIFIGYYADQHN----NPFHMSPYFG--YASRL---LSTSGIDYTYVRMAMYMDPLK  148 (289)
T ss_dssp             HHHHHHHHHHHTTCCEEEEEEESCCSTT----CCSTTHHHHH--HHHHH---HHHHCCEEEEEEECEESTTHH
T ss_pred             HHHHHHHHHHHcCCCEEEEEcccCCCCC----CCCccchhHH--HHHHH---HHHcCCCEEEEeccccccccH
Confidence            22222222111  368999999643322    2233333211  22222   233489999999999988753

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=98.58  E-value=2.2e-07  Score=70.33  Aligned_cols=124  Identities=8%  Similarity=0.009  Sum_probs=78.5

Q ss_pred             cccCCCEEEEeecch------HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQD------DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+.      ++.+. +..+.. ..+.++.+|++|.+++.++++     ++|+|||++|....      
T Consensus        24 L~~~g~~V~~~~R~~~~~~~~~~~~~-l~~~~~-~~v~~v~~D~~d~~~l~~a~~-----~~d~vi~~a~~~~~------   90 (321)
T 3c1o_A           24 SLSFSHPTFIYARPLTPDSTPSSVQL-REEFRS-MGVTIIEGEMEEHEKMVSVLK-----QVDIVISALPFPMI------   90 (321)
T ss_dssp             HHHTTCCEEEEECCCCTTCCHHHHHH-HHHHHH-TTCEEEECCTTCHHHHHHHHT-----TCSEEEECCCGGGS------
T ss_pred             HHhCCCcEEEEECCcccccChHHHHH-HHHhhc-CCcEEEEecCCCHHHHHHHHc-----CCCEEEECCCccch------
Confidence            678899999999985      23322 222211 258899999999999999887     38999999996421      


Q ss_pred             cCCHHHHHHhhhee-ecceeEEEeccccccc-c--C---ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           76 DTDNEKVKRVMIMV-VFLGVLLFTANLATET-I--G---EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        76 ~~~~~~~~~~~~~n-~~~~~iv~iss~~~~~-~--~---~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      .....-++...+.. +  +++| .|+ .+.. .  .   +....| .+|.+++.+++.    .   |++++.|+||.+.+
T Consensus        91 ~~~~~l~~aa~~~g~v--~~~v-~S~-~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~----~---~~~~~~lrp~~~~~  158 (321)
T 3c1o_A           91 SSQIHIINAIKAAGNI--KRFL-PSD-FGCEEDRIKPLPPFESVL-EKKRIIRRAIEA----A---ALPYTYVSANCFGA  158 (321)
T ss_dssp             GGGHHHHHHHHHHCCC--CEEE-CSC-CSSCGGGCCCCHHHHHHH-HHHHHHHHHHHH----H---TCCBEEEECCEEHH
T ss_pred             hhHHHHHHHHHHhCCc--cEEe-ccc-cccCccccccCCCcchHH-HHHHHHHHHHHH----c---CCCeEEEEeceecc
Confidence            11222222222222 2  3566 333 3311 0  1   224578 999999888763    2   68888899998765


Q ss_pred             cc
Q 042200          149 PF  150 (181)
Q Consensus       149 ~~  150 (181)
                      .+
T Consensus       159 ~~  160 (321)
T 3c1o_A          159 YF  160 (321)
T ss_dssp             HH
T ss_pred             cc
Confidence            43

>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2

Probab=98.55  E-value=3.2e-07  Score=68.91  Aligned_cols=125  Identities=10%  Similarity=0.106  Sum_probs=78.5

Q ss_pred             cccCCCEEEEeecch------HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcc
Q 042200            2 FIQHRAKVIIADVQD------DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~------~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      |+++|++|++++|+.      ++.+. ...+.. ..+.++.+|++|.+++.++++     ++|+|||++|....      
T Consensus        24 L~~~g~~V~~l~R~~~~~~~~~~~~~-~~~l~~-~~v~~v~~D~~d~~~l~~~~~-----~~d~vi~~a~~~~~------   90 (308)
T 1qyc_A           24 SLDLGHPTFLLVRESTASSNSEKAQL-LESFKA-SGANIVHGSIDDHASLVEAVK-----NVDVVISTVGSLQI------   90 (308)
T ss_dssp             HHHTTCCEEEECCCCCTTTTHHHHHH-HHHHHT-TTCEEECCCTTCHHHHHHHHH-----TCSEEEECCCGGGS------
T ss_pred             HHhCCCCEEEEECCcccccCHHHHHH-HHHHHh-CCCEEEEeccCCHHHHHHHHc-----CCCEEEECCcchhh------
Confidence            678899999999973      22222 222221 268899999999999999888     38999999996421      


Q ss_pred             cCCHHHHHHhhhee-ecceeEEEecccccccc-----CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           76 DTDNEKVKRVMIMV-VFLGVLLFTANLATETI-----GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        76 ~~~~~~~~~~~~~n-~~~~~iv~iss~~~~~~-----~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      .....-++...+.. +  +++| .|+......     .|....| .+|.+++.+++.       .|++++.++||.+.+.
T Consensus        91 ~~~~~l~~aa~~~g~v--~~~v-~S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~~r~~~~~~~  159 (308)
T 1qyc_A           91 ESQVNIIKAIKEVGTV--KRFF-PSEFGNDVDNVHAVEPAKSVF-EVKAKVRRAIEA-------EGIPYTYVSSNCFAGY  159 (308)
T ss_dssp             GGGHHHHHHHHHHCCC--SEEE-CSCCSSCTTSCCCCTTHHHHH-HHHHHHHHHHHH-------HTCCBEEEECCEEHHH
T ss_pred             hhHHHHHHHHHhcCCC--ceEe-ecccccCccccccCCcchhHH-HHHHHHHHHHHh-------cCCCeEEEEeceeccc
Confidence            11122222222222 2  3565 344321211     1224568 899998887763       2688889999987664


Q ss_pred             c
Q 042200          150 F  150 (181)
Q Consensus       150 ~  150 (181)
                      +
T Consensus       160 ~  160 (308)
T 1qyc_A          160 F  160 (308)
T ss_dssp             H
T ss_pred             c
Confidence            3

>3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A*

Probab=98.53  E-value=7.3e-08  Score=65.90  Aligned_cols=63  Identities=19%  Similarity=0.184  Sum_probs=49.2

Q ss_pred             cccCCCEEEEeecchHHH------HHHHhHcCCCCceEEEeeecCCh--hHHHHHHHh--cccCCccEEEEccccc
Q 042200            2 FIQHRAKVIIADVQDDLC------RALCKEFDSDELISYVCCNVTID--SDVKNVFDF--TKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~------~~~~~~~~~~~~~~~~~~D~~~~--~~i~~~~~~--~~~~~id~vi~~ag~~   67 (181)
                      |+++|++|++..|+....      .+..++..  .++..+.+|+++.  ++++++++.  .++|+ |++|||||+.
T Consensus        36 La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~G--~~~~~i~~Dv~~~~~~~v~~~~~~i~~~~G~-dVLVnnAgg~  108 (157)
T 3gxh_A           36 LKQAGVDVVINLMPDSSKDAHPDEGKLVTQAG--MDYVYIPVDWQNPKVEDVEAFFAAMDQHKGK-DVLVHCLANY  108 (157)
T ss_dssp             HHHTTCCEEEECSCTTSTTSCTTHHHHHHHTT--CEEEECCCCTTSCCHHHHHHHHHHHHHTTTS-CEEEECSBSH
T ss_pred             HHHcCCCEEEECCCcccccccccHHHHHHHcC--CeEEEecCCCCCCCHHHHHHHHHHHHhcCCC-CEEEECCCCC
Confidence            678999999998864332      22333333  3788899999999  999999998  56888 9999999974

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=98.47  E-value=1.9e-07  Score=70.58  Aligned_cols=124  Identities=9%  Similarity=0.009  Sum_probs=76.9

Q ss_pred             cccCCCEEEEeecchH-HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDD-LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|++++|+.. ..+. ...+.. ..+.++.+|++|.+++.++++     ++|+|||+++....      .....
T Consensus        31 L~~~g~~V~~l~R~~~~~~~~-~~~l~~-~~v~~v~~Dl~d~~~l~~a~~-----~~d~vi~~a~~~~~------~~~~~   97 (318)
T 2r6j_A           31 SLKLGHPTYVFTRPNSSKTTL-LDEFQS-LGAIIVKGELDEHEKLVELMK-----KVDVVISALAFPQI------LDQFK   97 (318)
T ss_dssp             HHHTTCCEEEEECTTCSCHHH-HHHHHH-TTCEEEECCTTCHHHHHHHHT-----TCSEEEECCCGGGS------TTHHH
T ss_pred             HHHCCCcEEEEECCCCchhhH-HHHhhc-CCCEEEEecCCCHHHHHHHHc-----CCCEEEECCchhhh------HHHHH
Confidence            6788999999999864 2221 121211 258889999999999999887     38999999996421      11112


Q ss_pred             HHHHhhhee-ecceeEEEecccccccc-----CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           81 KVKRVMIMV-VFLGVLLFTANLATETI-----GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        81 ~~~~~~~~n-~~~~~iv~iss~~~~~~-----~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      -++...+.. +  +++|+ |+......     .+....| .+|.+++.+++.       .|++++.++||.+...
T Consensus        98 l~~aa~~~g~v--~~~v~-S~~g~~~~~~~~~~p~~~~y-~sK~~~e~~~~~-------~~~~~~~lr~~~~~~~  161 (318)
T 2r6j_A           98 ILEAIKVAGNI--KRFLP-SDFGVEEDRINALPPFEALI-ERKRMIRRAIEE-------ANIPYTYVSANCFASY  161 (318)
T ss_dssp             HHHHHHHHCCC--CEEEC-SCCSSCTTTCCCCHHHHHHH-HHHHHHHHHHHH-------TTCCBEEEECCEEHHH
T ss_pred             HHHHHHhcCCC--CEEEe-eccccCcccccCCCCcchhH-HHHHHHHHHHHh-------cCCCeEEEEcceehhh
Confidence            122222222 2  35653 43221111     1223468 899998887753       3788889999876654

>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*

Probab=98.43  E-value=2.9e-07  Score=70.68  Aligned_cols=124  Identities=10%  Similarity=-0.020  Sum_probs=77.8

Q ss_pred             cccCC-----CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHR-----AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G-----~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|     ++|++++|+.....     +. ..++.++.+|++|.+++.++++.  .+++|+|||+||....       
T Consensus        21 L~~~g~~~~~~~V~~~~r~~~~~~-----~~-~~~~~~~~~Dl~d~~~~~~~~~~--~~~~d~vih~a~~~~~-------   85 (364)
T 2v6g_A           21 LPLADTPGGPWKVYGVARRTRPAW-----HE-DNPINYVQCDISDPDDSQAKLSP--LTDVTHVFYVTWANRS-------   85 (364)
T ss_dssp             TTSTTCTTCSEEEEEEESSCCCSC-----CC-SSCCEEEECCTTSHHHHHHHHTT--CTTCCEEEECCCCCCS-------
T ss_pred             HHhCCCCCCceEEEEEeCCCCccc-----cc-cCceEEEEeecCCHHHHHHHHhc--CCCCCEEEECCCCCcc-------
Confidence            67888     99999999764322     11 13688999999999999988873  2248999999996532       


Q ss_pred             CCHHHHHHhhheeec-----------c----eeEE-------EeccccccccC--------------ccchhhHhhHHHH
Q 042200           77 TDNEKVKRVMIMVVF-----------L----GVLL-------FTANLATETIG--------------EALYDYLMSKYAV  120 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------~----~~iv-------~iss~~~~~~~--------------~~~~~y~~sK~a~  120 (181)
                       +   ....+++|+.           .    .++|       ++||...+...              +....|    .+.
T Consensus        86 -~---~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~~~~~E~~~~~~~~~~y----~~~  157 (364)
T 2v6g_A           86 -T---EQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFY----YDL  157 (364)
T ss_dssp             -S---HHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCCSSBCTTSCCCSSCCHH----HHH
T ss_pred             -h---HHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCCCCCCccccCCccchhh----HHH
Confidence             1   1222233322           1    2555       67776433211              112345    234


Q ss_pred             HHHHHHHHHHhcCCC-eEEEEEecCcccCccc
Q 042200          121 LGLMKNLCVELGQYD-IRVNSIAHIVSATPFF  151 (181)
Q Consensus       121 ~~l~~~la~~~~~~~-i~v~~i~Pg~v~t~~~  151 (181)
                      +.+++.++.   .+| +++..++|+.+..+..
T Consensus       158 E~~~~~~~~---~~~~~~~~ilRp~~v~G~~~  186 (364)
T 2v6g_A          158 EDIMLEEVE---KKEGLTWSVHRPGNIFGFSP  186 (364)
T ss_dssp             HHHHHHHHT---TSTTCEEEEEEESSEECCCT
T ss_pred             HHHHHHHhh---cCCCceEEEECCCceeCCCC
Confidence            444444432   245 9999999999998754

>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}

Probab=98.24  E-value=1.3e-06  Score=70.57  Aligned_cols=120  Identities=8%  Similarity=-0.118  Sum_probs=72.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+..+.             ..+.+|+.+.  +    . ..+.++|+|||+||....  .   ..+.+.
T Consensus       167 L~~~G~~V~~l~R~~~~~-------------~~v~~d~~~~--~----~-~~l~~~D~Vih~A~~~~~--~---~~~~~~  221 (516)
T 3oh8_A          167 LQTGGHEVIQLVRKEPKP-------------GKRFWDPLNP--A----S-DLLDGADVLVHLAGEPIF--G---RFNDSH  221 (516)
T ss_dssp             HHHTTCEEEEEESSSCCT-------------TCEECCTTSC--C----T-TTTTTCSEEEECCCC----------CCGGG
T ss_pred             HHHCCCEEEEEECCCCCc-------------cceeecccch--h----H-HhcCCCCEEEECCCCccc--c---ccchhH
Confidence            567788888888875431             1256677542  1    1 123468999999997543  2   222333


Q ss_pred             HHHhhheeec--------------ceeEEEeccccccc-cC----------ccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           82 VKRVMIMVVF--------------LGVLLFTANLATET-IG----------EALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        82 ~~~~~~~n~~--------------~~~iv~iss~~~~~-~~----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      ....+++|+.              .+++|++||...+. ..          .+...|+.+|..++.+.+    .....|+
T Consensus       222 ~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~----~~~~~gi  297 (516)
T 3oh8_A          222 KEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATA----PASDAGK  297 (516)
T ss_dssp             HHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH----HHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH----HHHhCCC
Confidence            4444444443              35899999966443 10          134457777777665543    2334589


Q ss_pred             EEEEEecCcccCcc
Q 042200          137 RVNSIAHIVSATPF  150 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~  150 (181)
                      +++.++||.+.++.
T Consensus       298 ~~~ilRp~~v~Gp~  311 (516)
T 3oh8_A          298 RVAFIRTGVALSGR  311 (516)
T ss_dssp             EEEEEEECEEEBTT
T ss_pred             CEEEEEeeEEECCC
Confidence            99999999998864

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=98.12  E-value=4e-07  Score=68.16  Aligned_cols=84  Identities=11%  Similarity=0.076  Sum_probs=59.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH-H
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN-E   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~-~   80 (181)
                      |+++|++|++++|+.+++++..+++.....+.++.+|+++.+++.++++.     +|+||||+|..... .+..+.+. +
T Consensus       139 L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~DvlVn~ag~g~~~-~~~~~~~~~~  212 (287)
T 1lu9_A          139 LAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKG-----AHFVFTAGAIGLEL-LPQAAWQNES  212 (287)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTT-----CSEEEECCCTTCCS-BCHHHHTTCT
T ss_pred             HHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHh-----CCEEEECCCccccC-CChhHcCchH
Confidence            67899999999999888887766553211356788999999998888773     79999999864221 22222332 4


Q ss_pred             HHHHhhheeec
Q 042200           81 KVKRVMIMVVF   91 (181)
Q Consensus        81 ~~~~~~~~n~~   91 (181)
                      .+...+++|+.
T Consensus       213 ~~~~~~dvn~~  223 (287)
T 1lu9_A          213 SIEIVADYNAQ  223 (287)
T ss_dssp             TCCEEEECCCS
T ss_pred             HHHHHHHhhhh
Confidence            55567777775

>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*

Probab=97.68  E-value=5e-05  Score=57.78  Aligned_cols=129  Identities=9%  Similarity=0.039  Sum_probs=74.8

Q ss_pred             cccCCC-------EEEEeecch--HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCC
Q 042200            2 FIQHRA-------KVIIADVQD--DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDR   72 (181)
Q Consensus         2 l~~~G~-------~Vv~~~r~~--~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~   72 (181)
                      |+++|+       +|++++++.  ++.+.....+... .+.++ .|+++.+++...++     ..|+|||+||....  .
T Consensus        24 L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~-~~~~~-~di~~~~~~~~a~~-----~~D~Vih~Ag~~~~--~   94 (327)
T 1y7t_A           24 IAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC-AFPLL-AGLEATDDPKVAFK-----DADYALLVGAAPRK--A   94 (327)
T ss_dssp             HHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT-TCTTE-EEEEEESCHHHHTT-----TCSEEEECCCCCCC--T
T ss_pred             HHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcc-ccccc-CCeEeccChHHHhC-----CCCEEEECCCcCCC--C
Confidence            455664       799999874  3333322233211 12223 57776666655554     47999999997643  1


Q ss_pred             CcccCCHHHHHHhhheeec------------c---eeEEEecccccc--------c-cCccchhhHhhHHHHHHHHHHHH
Q 042200           73 TTLDTDNEKVKRVMIMVVF------------L---GVLLFTANLATE--------T-IGEALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~------------~---~~iv~iss~~~~--------~-~~~~~~~y~~sK~a~~~l~~~la  128 (181)
                         ..+.++   .++.|+.            .   .+++++|+....        . +.++...|+.+|...+.+...++
T Consensus        95 ---~~~~~~---~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~~~p~~~yg~tkl~~er~~~~~a  168 (327)
T 1y7t_A           95 ---GMERRD---LLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPGLNPRNFTAMTRLDHNRAKAQLA  168 (327)
T ss_dssp             ---TCCHHH---HHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHH
T ss_pred             ---CCCHHH---HHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCCCChhheeccchHHHHHHHHHHH
Confidence               123222   2233332            2   367777775421        1 24456679999999999888888


Q ss_pred             HHhcCCCeEEEEEecCcccC
Q 042200          129 VELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus       129 ~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ..+   |+.+..++|+++..
T Consensus       169 ~~~---g~~~~~vr~~~V~G  185 (327)
T 1y7t_A          169 KKT---GTGVDRIRRMTVWG  185 (327)
T ss_dssp             HHH---TCCGGGEECCEEEB
T ss_pred             HHh---CcChhheeeeEEEc
Confidence            776   45555555554443

>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}

Probab=97.37  E-value=0.0005  Score=51.20  Aligned_cols=119  Identities=10%  Similarity=-0.077  Sum_probs=65.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|+++.|++..           ..+   ..|     .   ... ..+..+|.|||+||....  ......+...
T Consensus        20 L~~~G~~V~~l~R~~~~-----------~~~---~~~-----~---~~~-~~l~~~d~vihla~~~i~--~~~~~~~~~~   74 (298)
T 4b4o_A           20 LNARGHEVTLVSRKPGP-----------GRI---TWD-----E---LAA-SGLPSCDAAVNLAGENIL--NPLRRWNETF   74 (298)
T ss_dssp             HHHTTCEEEEEESSCCT-----------TEE---EHH-----H---HHH-HCCCSCSEEEECCCCCSS--CTTSCCCHHH
T ss_pred             HHHCCCEEEEEECCCCc-----------Cee---ecc-----h---hhH-hhccCCCEEEEeccCccc--chhhhhhhhh
Confidence            67889999999886431           121   111     1   111 123568999999986433  2333344444


Q ss_pred             HHHhhheeec---------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           82 VKRVMIMVVF---------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        82 ~~~~~~~n~~---------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      ....++.|+.               ..++|+.||...+...           .+...|+..+...+.     .......+
T Consensus        75 ~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~~~~~~~~~~~~e~-----~~~~~~~~  149 (298)
T 4b4o_A           75 QKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEA-----AARLPGDS  149 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSCSSHHHHHHHHHHH-----HHCCSSSS
T ss_pred             hhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccccchhHHHHHHHHH-----HHHhhccC
Confidence            4444444443               3346666665443221           122334444443332     12345678


Q ss_pred             eEEEEEecCcccCcc
Q 042200          136 IRVNSIAHIVSATPF  150 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~  150 (181)
                      +++..++|+.+..+.
T Consensus       150 ~~~~~~r~~~v~g~~  164 (298)
T 4b4o_A          150 TRQVVVRSGVVLGRG  164 (298)
T ss_dssp             SEEEEEEECEEECTT
T ss_pred             CceeeeeeeeEEcCC
Confidence            999999999998763

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=97.28  E-value=0.00077  Score=42.73  Aligned_cols=55  Identities=11%  Similarity=0.076  Sum_probs=44.2

Q ss_pred             cccCC-CEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHR-AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G-~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |++.| ++|++++|+.++.+...   .  ..+..+.+|+++.+++.++++     .+|+||++++.
T Consensus        24 l~~~g~~~v~~~~r~~~~~~~~~---~--~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~~~~   79 (118)
T 3ic5_A           24 LKTSSNYSVTVADHDLAALAVLN---R--MGVATKQVDAKDEAGLAKALG-----GFDAVISAAPF   79 (118)
T ss_dssp             HHHCSSEEEEEEESCHHHHHHHH---T--TTCEEEECCTTCHHHHHHHTT-----TCSEEEECSCG
T ss_pred             HHhCCCceEEEEeCCHHHHHHHH---h--CCCcEEEecCCCHHHHHHHHc-----CCCEEEECCCc
Confidence            56788 88999999988877654   1  156778999999988888776     48999999964

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=97.11  E-value=0.00077  Score=52.79  Aligned_cols=63  Identities=13%  Similarity=0.167  Sum_probs=51.0

Q ss_pred             cccCC---CEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHR---AKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G---~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++.|   .+|++++|+.+++++..+++...  .++..+.+|+++.+++.++++.   .++|+||||+|..
T Consensus        20 L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~---~~~DvVin~ag~~   87 (405)
T 4ina_A           20 MAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINE---VKPQIVLNIALPY   87 (405)
T ss_dssp             HHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHH---HCCSEEEECSCGG
T ss_pred             HHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHh---hCCCEEEECCCcc
Confidence            56677   38999999999998887776431  2578899999999999999985   2589999999853

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.00  E-value=0.0013  Score=52.16  Aligned_cols=58  Identities=14%  Similarity=0.115  Sum_probs=45.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++.|++|++++|+.+++++..+.+.   .+..+.+|+++.+++.++++     .+|+||||++..
T Consensus        22 L~~~G~~V~v~~R~~~~a~~la~~~~---~~~~~~~Dv~d~~~l~~~l~-----~~DvVIn~a~~~   79 (450)
T 1ff9_A           22 LTDSGIKVTVACRTLESAKKLSAGVQ---HSTPISLDVNDDAALDAEVA-----KHDLVISLIPYT   79 (450)
T ss_dssp             HHTTTCEEEEEESSHHHHHHTTTTCT---TEEEEECCTTCHHHHHHHHT-----TSSEEEECCC--
T ss_pred             HHhCcCEEEEEECCHHHHHHHHHhcC---CceEEEeecCCHHHHHHHHc-----CCcEEEECCccc
Confidence            56789999999999888776655443   47788999999998888776     489999999864

>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*

Probab=96.05  E-value=0.0054  Score=44.07  Aligned_cols=57  Identities=9%  Similarity=0.095  Sum_probs=37.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |+++|++|++++++.. ++     ...  .+  -.+|+++.+++...+.+ .++++|++|||||....
T Consensus        44 ~~~~Ga~V~l~~~~~~-l~-----~~~--g~--~~~dv~~~~~~~~~v~~-~~~~~Dili~~Aav~d~  100 (226)
T 1u7z_A           44 AARRGANVTLVSGPVS-LP-----TPP--FV--KRVDVMTALEMEAAVNA-SVQQQNIFIGCAAVADY  100 (226)
T ss_dssp             HHHTTCEEEEEECSCC-CC-----CCT--TE--EEEECCSHHHHHHHHHH-HGGGCSEEEECCBCCSE
T ss_pred             HHHCCCEEEEEECCcc-cc-----cCC--CC--eEEccCcHHHHHHHHHH-hcCCCCEEEECCcccCC
Confidence            6789999999987642 10     111  22  35688886665544433 56789999999997643

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=96.04  E-value=0.016  Score=46.26  Aligned_cols=57  Identities=19%  Similarity=0.145  Sum_probs=45.4

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++. |++|++++|+.++++++.+. .   .+..+.+|+++.+++..+++     ++|+|||+++..
T Consensus        42 L~~~~g~~V~v~~R~~~ka~~la~~-~---~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~tp~~   99 (467)
T 2axq_A           42 LAANDDINVTVACRTLANAQALAKP-S---GSKAISLDVTDDSALDKVLA-----DNDVVISLIPYT   99 (467)
T ss_dssp             HHTSTTEEEEEEESSHHHHHHHHGG-G---TCEEEECCTTCHHHHHHHHH-----TSSEEEECSCGG
T ss_pred             HHhCCCCeEEEEECCHHHHHHHHHh-c---CCcEEEEecCCHHHHHHHHc-----CCCEEEECCchh
Confidence            4566 78899999999888877654 2   35667899999988888776     379999999864

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=95.73  E-value=0.017  Score=43.63  Aligned_cols=80  Identities=16%  Similarity=0.151  Sum_probs=52.9

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      .+.|++|++++++.++++.. +++..  .   ..+|.++.+++.+.+.+ .. +++|++|+|+|..             .
T Consensus       167 ~~~G~~V~~~~~~~~~~~~~-~~~g~--~---~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~-------------~  226 (333)
T 1v3u_A          167 KLKGCKVVGAAGSDEKIAYL-KQIGF--D---AAFNYKTVNSLEEALKKASP-DGYDCYFDNVGGE-------------F  226 (333)
T ss_dssp             HHTTCEEEEEESSHHHHHHH-HHTTC--S---EEEETTSCSCHHHHHHHHCT-TCEEEEEESSCHH-------------H
T ss_pred             HHCCCEEEEEeCCHHHHHHH-HhcCC--c---EEEecCCHHHHHHHHHHHhC-CCCeEEEECCChH-------------H
Confidence            46899999999998887766 55532  1   33588875566666665 33 5799999999931             1


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      +...++.--..|+++.++...
T Consensus       227 ~~~~~~~l~~~G~~v~~g~~~  247 (333)
T 1v3u_A          227 LNTVLSQMKDFGKIAICGAIS  247 (333)
T ss_dssp             HHHHHTTEEEEEEEEECCCCC
T ss_pred             HHHHHHHHhcCCEEEEEeccc
Confidence            333433322268888887643

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=95.52  E-value=0.025  Score=37.02  Aligned_cols=55  Identities=15%  Similarity=0.099  Sum_probs=42.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.++|++|++++++++..+...+.     .+.++.+|.++.+.+.++-    ....|.||.+.+
T Consensus        25 L~~~g~~V~~id~~~~~~~~~~~~-----~~~~~~gd~~~~~~l~~~~----~~~~d~vi~~~~   79 (141)
T 3llv_A           25 LTAAGKKVLAVDKSKEKIELLEDE-----GFDAVIADPTDESFYRSLD----LEGVSAVLITGS   79 (141)
T ss_dssp             HHHTTCCEEEEESCHHHHHHHHHT-----TCEEEECCTTCHHHHHHSC----CTTCSEEEECCS
T ss_pred             HHHCCCeEEEEECCHHHHHHHHHC-----CCcEEECCCCCHHHHHhCC----cccCCEEEEecC
Confidence            567899999999999888766542     3667889999988776541    235799998877

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=94.98  E-value=0.047  Score=41.91  Aligned_cols=54  Identities=9%  Similarity=0.141  Sum_probs=43.4

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      +.+.++|.+++++.+++++..+      .+..+.+|++|.+++.++++.     .|+||++++..
T Consensus        35 L~~~~~v~~~~~~~~~~~~~~~------~~~~~~~d~~d~~~l~~~~~~-----~DvVi~~~p~~   88 (365)
T 3abi_A           35 LKDEFDVYIGDVNNENLEKVKE------FATPLKVDASNFDKLVEVMKE-----FELVIGALPGF   88 (365)
T ss_dssp             HTTTSEEEEEESCHHHHHHHTT------TSEEEECCTTCHHHHHHHHTT-----CSEEEECCCGG
T ss_pred             HhcCCCeEEEEcCHHHHHHHhc------cCCcEEEecCCHHHHHHHHhC-----CCEEEEecCCc
Confidence            4566899999999888876533      456788999999999998883     69999998864

>2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A*

Probab=94.86  E-value=0.0067  Score=49.04  Aligned_cols=77  Identities=14%  Similarity=0.026  Sum_probs=45.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCC---CCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNM---DRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~---~~~~~~~~   78 (181)
                      |++.|++|++++|+.+++++..+++..  ++.    ++.+   +    .....+.+|+||||+|.....   ..++.+.+
T Consensus       383 L~~~G~~V~i~~R~~~~a~~la~~~~~--~~~----~~~d---l----~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~  449 (523)
T 2o7s_A          383 AKEKGAKVVIANRTYERALELAEAIGG--KAL----SLTD---L----DNYHPEDGMVLANTTSMGMQPNVEETPISKDA  449 (523)
T ss_dssp             HHHHCC-CEEEESSHHHHHHHHHHTTC---CE----ETTT---T----TTC--CCSEEEEECSSTTCTTCTTCCSSCTTT
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHcCC--cee----eHHH---h----hhccccCceEEEECCCCCCCCCCCCCCCChHH
Confidence            678899999999999988888777643  221    2222   1    110113589999999974320   02344445


Q ss_pred             HHHHHHhhheeec
Q 042200           79 NEKVKRVMIMVVF   91 (181)
Q Consensus        79 ~~~~~~~~~~n~~   91 (181)
                      .+.+...+++|+.
T Consensus       450 ~~~~~~v~Dvny~  462 (523)
T 2o7s_A          450 LKHYALVFDAVYT  462 (523)
T ss_dssp             GGGEEEEEECCCS
T ss_pred             cCcCcEEEEEeeC
Confidence            5556666666664

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=94.77  E-value=0.13  Score=38.56  Aligned_cols=81  Identities=16%  Similarity=0.108  Sum_probs=50.0

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      .+.|++|++++|++++++...+ +..  .   ..+|.++.+..+.+.+.....++|++|+|+|.     ..        +
T Consensus       162 ~~~G~~V~~~~~~~~~~~~~~~-~g~--~---~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~g~-----~~--------~  222 (327)
T 1qor_A          162 KALGAKLIGTVGTAQKAQSALK-AGA--W---QVINYREEDLVERLKEITGGKKVRVVYDSVGR-----DT--------W  222 (327)
T ss_dssp             HHHTCEEEEEESSHHHHHHHHH-HTC--S---EEEETTTSCHHHHHHHHTTTCCEEEEEECSCG-----GG--------H
T ss_pred             HHcCCEEEEEeCCHHHHHHHHH-cCC--C---EEEECCCccHHHHHHHHhCCCCceEEEECCch-----HH--------H
Confidence            4579999999999877766543 432  2   23577776555555443212369999999992     11        2


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      +..++.--..|+++.+++..
T Consensus       223 ~~~~~~l~~~G~iv~~g~~~  242 (327)
T 1qor_A          223 ERSLDCLQRRGLMVSFGNSS  242 (327)
T ss_dssp             HHHHHTEEEEEEEEECCCTT
T ss_pred             HHHHHHhcCCCEEEEEecCC
Confidence            33333222368899887654

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=94.77  E-value=0.066  Score=37.08  Aligned_cols=81  Identities=10%  Similarity=0.049  Sum_probs=49.6

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      .+.|++|++++|++++.+.. +++..  .   ..+|.++.+..+.+.+....+++|++|+|+|.     .        .+
T Consensus        60 ~~~G~~V~~~~~~~~~~~~~-~~~g~--~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~-----~--------~~  120 (198)
T 1pqw_A           60 KMIGARIYTTAGSDAKREML-SRLGV--E---YVGDSRSVDFADEILELTDGYGVDVVLNSLAG-----E--------AI  120 (198)
T ss_dssp             HHHTCEEEEEESSHHHHHHH-HTTCC--S---EEEETTCSTHHHHHHHHTTTCCEEEEEECCCT-----H--------HH
T ss_pred             HHcCCEEEEEeCCHHHHHHH-HHcCC--C---EEeeCCcHHHHHHHHHHhCCCCCeEEEECCch-----H--------HH
Confidence            45799999999998776654 33322  1   23577776555555443212469999999972     1        13


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      ...++.--..|+++.+++..
T Consensus       121 ~~~~~~l~~~G~~v~~g~~~  140 (198)
T 1pqw_A          121 QRGVQILAPGGRFIELGKKD  140 (198)
T ss_dssp             HHHHHTEEEEEEEEECSCGG
T ss_pred             HHHHHHhccCCEEEEEcCCC
Confidence            33333222278999988754

>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}

Probab=94.65  E-value=0.0052  Score=44.31  Aligned_cols=59  Identities=10%  Similarity=0.151  Sum_probs=36.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |+++|++|++++|.... .   ....  ..+.  ..|+++.++....+.+ .++++|++|||||....
T Consensus        39 ~~~~Ga~V~lv~~~~~~-~---~~~~--~~~~--~~~v~s~~em~~~v~~-~~~~~Dili~aAAvsD~   97 (232)
T 2gk4_A           39 LLSAGYEVCLITTKRAL-K---PEPH--PNLS--IREITNTKDLLIEMQE-RVQDYQVLIHSMAVSDY   97 (232)
T ss_dssp             HHHTTCEEEEEECTTSC-C---CCCC--TTEE--EEECCSHHHHHHHHHH-HGGGCSEEEECSBCCSE
T ss_pred             HHHCCCEEEEEeCCccc-c---ccCC--CCeE--EEEHhHHHHHHHHHHH-hcCCCCEEEEcCccccc
Confidence            67899999999986431 0   0001  1232  3355554444444433 55789999999997654

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=94.56  E-value=0.01  Score=47.41  Aligned_cols=22  Identities=18%  Similarity=0.215  Sum_probs=17.5

Q ss_pred             cccCCCEEEEeecchHHHHHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALC   23 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~   23 (181)
                      |++.|++|+++++++..+....
T Consensus       284 Laa~GA~Viv~D~~~~~a~~Aa  305 (488)
T 3ond_A          284 LKQAGARVIVTEIDPICALQAT  305 (488)
T ss_dssp             HHHTTCEEEEECSCHHHHHHHH
T ss_pred             HHHCCCEEEEEcCCHHHHHHHH
Confidence            5688999999999987766544

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=94.18  E-value=0.14  Score=39.37  Aligned_cols=85  Identities=15%  Similarity=0.108  Sum_probs=50.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |...|++|++++|+.++++...+.+..  .   +.+|.++.+++.+.+.     ..|+||++++..... .+ .-...+.
T Consensus       185 l~~~Ga~V~~~d~~~~~~~~~~~~~g~--~---~~~~~~~~~~l~~~~~-----~~DvVi~~~g~~~~~-~~-~li~~~~  252 (369)
T 2eez_A          185 ALGMGAQVTILDVNHKRLQYLDDVFGG--R---VITLTATEANIKKSVQ-----HADLLIGAVLVPGAK-AP-KLVTRDM  252 (369)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHTTT--S---EEEEECCHHHHHHHHH-----HCSEEEECCC---------CCSCHHH
T ss_pred             HHhCCCEEEEEECCHHHHHHHHHhcCc--e---EEEecCCHHHHHHHHh-----CCCEEEECCCCCccc-cc-hhHHHHH
Confidence            457899999999999888766554543  2   4568888888877776     379999999965310 11 1112222


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      +. .+.   .++.||++++..
T Consensus       253 l~-~mk---~gg~iV~v~~~~  269 (369)
T 2eez_A          253 LS-LMK---EGAVIVDVAVDQ  269 (369)
T ss_dssp             HT-TSC---TTCEEEECC---
T ss_pred             HH-hhc---CCCEEEEEecCC
Confidence            21 111   157888888653

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=94.07  E-value=0.16  Score=33.68  Aligned_cols=57  Identities=12%  Similarity=0.117  Sum_probs=41.6

Q ss_pred             cccCCCEEEEeecc-hHHHHHHHhHcCCCCceEEEeeecCChhHHHHH-HHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQ-DDLCRALCKEFDSDELISYVCCNVTIDSDVKNV-FDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~-~~~~~~~~id~vi~~ag   65 (181)
                      |.+.|++|++++++ .+..+........  .+.++.+|.++.+.+.+. ++     ..|.||.+.+
T Consensus        22 L~~~g~~V~vid~~~~~~~~~~~~~~~~--~~~~i~gd~~~~~~l~~a~i~-----~ad~vi~~~~   80 (153)
T 1id1_A           22 LNQRGQNVTVISNLPEDDIKQLEQRLGD--NADVIPGDSNDSSVLKKAGID-----RCRAILALSD   80 (153)
T ss_dssp             HHHTTCCEEEEECCCHHHHHHHHHHHCT--TCEEEESCTTSHHHHHHHTTT-----TCSEEEECSS
T ss_pred             HHHCCCCEEEEECCChHHHHHHHHhhcC--CCeEEEcCCCCHHHHHHcChh-----hCCEEEEecC
Confidence            56789999999997 4555555444443  477889999998877665 33     4688888876

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=94.03  E-value=0.16  Score=32.63  Aligned_cols=56  Identities=13%  Similarity=0.272  Sum_probs=39.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.+.|++|++++|+++..+...+..    .+.++..|.++.+.+.+..    ....|+||++.+
T Consensus        23 L~~~g~~v~~~d~~~~~~~~~~~~~----~~~~~~~d~~~~~~l~~~~----~~~~d~vi~~~~   78 (140)
T 1lss_A           23 LSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDAG----IEDADMYIAVTG   78 (140)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHTT----TTTCSEEEECCS
T ss_pred             HHhCCCeEEEEECCHHHHHHHHHhc----CcEEEEcCCCCHHHHHHcC----cccCCEEEEeeC
Confidence            5678999999999988777665433    2456778888876654321    235799999976

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=93.80  E-value=0.08  Score=40.09  Aligned_cols=81  Identities=16%  Similarity=0.153  Sum_probs=51.7

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      ...|++|++++++.++++.+.+++..  .   ..+|.++.+++...+.+ .. +++|++|+|+|..             .
T Consensus       177 ~~~G~~V~~~~~~~~~~~~~~~~~g~--~---~~~d~~~~~~~~~~~~~~~~-~~~d~vi~~~g~~-------------~  237 (345)
T 2j3h_A          177 KMMGCYVVGSAGSKEKVDLLKTKFGF--D---DAFNYKEESDLTAALKRCFP-NGIDIYFENVGGK-------------M  237 (345)
T ss_dssp             HHTTCEEEEEESSHHHHHHHHHTSCC--S---EEEETTSCSCSHHHHHHHCT-TCEEEEEESSCHH-------------H
T ss_pred             HHCCCEEEEEeCCHHHHHHHHHHcCC--c---eEEecCCHHHHHHHHHHHhC-CCCcEEEECCCHH-------------H
Confidence            35799999999998887766545543  1   23477765555555555 32 5799999999841             2


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      +...++.--..|+++.++...
T Consensus       238 ~~~~~~~l~~~G~~v~~G~~~  258 (345)
T 2j3h_A          238 LDAVLVNMNMHGRIAVCGMIS  258 (345)
T ss_dssp             HHHHHTTEEEEEEEEECCCGG
T ss_pred             HHHHHHHHhcCCEEEEEcccc
Confidence            333333322378888876543

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=93.42  E-value=0.14  Score=38.60  Aligned_cols=60  Identities=8%  Similarity=0.066  Sum_probs=43.0

Q ss_pred             cccCCC-EEEEeecc---hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRA-KVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |++.|+ +|++++|+   .++++++.+++.....+.+...++.+.+++...+.     ..|+|||+...
T Consensus       173 L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~-----~aDiIINaTp~  236 (315)
T 3tnl_A          173 AALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA-----ESVIFTNATGV  236 (315)
T ss_dssp             HHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----TCSEEEECSST
T ss_pred             HHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----CCCEEEECccC
Confidence            678898 79999999   88888887766432123344557777777766665     36999998875

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=93.41  E-value=0.024  Score=42.07  Aligned_cols=58  Identities=21%  Similarity=0.182  Sum_probs=37.6

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |+++| +|++++|+.++++++.+++... .....+.+|+++.       . ..++.+|+||||+|...
T Consensus       147 L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~~-------~-~~~~~~DilVn~ag~~~  205 (287)
T 1nvt_A          147 LAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGL-------D-VDLDGVDIIINATPIGM  205 (287)
T ss_dssp             HTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECT-------T-CCCTTCCEEEECSCTTC
T ss_pred             HHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEeeH-------H-HhhCCCCEEEECCCCCC
Confidence            67889 9999999988887776655320 0000124455542       2 23467999999999754

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=93.38  E-value=0.2  Score=37.67  Aligned_cols=81  Identities=11%  Similarity=0.084  Sum_probs=49.0

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      .+.|++|++++|+.++++... ++..  .   ..+|.++.+..+.+.+.....++|++|+|+|.  .        .   +
T Consensus       167 ~~~G~~Vi~~~~~~~~~~~~~-~~g~--~---~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~g~--~--------~---~  227 (333)
T 1wly_A          167 RHLGATVIGTVSTEEKAETAR-KLGC--H---HTINYSTQDFAEVVREITGGKGVDVVYDSIGK--D--------T---L  227 (333)
T ss_dssp             HHTTCEEEEEESSHHHHHHHH-HHTC--S---EEEETTTSCHHHHHHHHHTTCCEEEEEECSCT--T--------T---H
T ss_pred             HHCCCEEEEEeCCHHHHHHHH-HcCC--C---EEEECCCHHHHHHHHHHhCCCCCeEEEECCcH--H--------H---H
Confidence            467999999999987776653 3433  2   23477765544444443112469999999994  1        1   2


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      +..++.--..|+++.++...
T Consensus       228 ~~~~~~l~~~G~iv~~g~~~  247 (333)
T 1wly_A          228 QKSLDCLRPRGMCAAYGHAS  247 (333)
T ss_dssp             HHHHHTEEEEEEEEECCCTT
T ss_pred             HHHHHhhccCCEEEEEecCC
Confidence            33332222267888876543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=93.35  E-value=0.071  Score=34.53  Aligned_cols=56  Identities=13%  Similarity=0.222  Sum_probs=38.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |.+.|++|++++++.+..+....    . ....+.+|.++.+.+.++    ...+.|+||++++.
T Consensus        25 l~~~g~~v~~~d~~~~~~~~~~~----~-~~~~~~~d~~~~~~l~~~----~~~~~d~vi~~~~~   80 (144)
T 2hmt_A           25 LHRMGHEVLAVDINEEKVNAYAS----Y-ATHAVIANATEENELLSL----GIRNFEYVIVAIGA   80 (144)
T ss_dssp             HHHTTCCCEEEESCHHHHHTTTT----T-CSEEEECCTTCHHHHHTT----TGGGCSEEEECCCS
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHH----h-CCEEEEeCCCCHHHHHhc----CCCCCCEEEECCCC
Confidence            56789999999998876654321    1 245677899887666543    12358999999884

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=93.19  E-value=0.13  Score=39.01  Aligned_cols=81  Identities=14%  Similarity=0.033  Sum_probs=52.2

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      ...|++|++++|+.++++.. +++..  .   ..+|+++.+++...+.+ .. +++|++|+++|..            +.
T Consensus       191 ~~~Ga~V~~~~~~~~~~~~~-~~~g~--~---~~~d~~~~~~~~~~~~~~~~-~~~D~vi~~~g~~------------~~  251 (347)
T 2hcy_A          191 KAMGYRVLGIDGGEGKEELF-RSIGG--E---VFIDFTKEKDIVGAVLKATD-GGAHGVINVSVSE------------AA  251 (347)
T ss_dssp             HHTTCEEEEEECSTTHHHHH-HHTTC--C---EEEETTTCSCHHHHHHHHHT-SCEEEEEECSSCH------------HH
T ss_pred             HHCCCcEEEEcCCHHHHHHH-HHcCC--c---eEEecCccHhHHHHHHHHhC-CCCCEEEECCCcH------------HH
Confidence            45799999999988777543 44432  1   23488866667666665 32 2799999999842            12


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      ++..++.--..|+++.+++..
T Consensus       252 ~~~~~~~l~~~G~iv~~g~~~  272 (347)
T 2hcy_A          252 IEASTRYVRANGTTVLVGMPA  272 (347)
T ss_dssp             HHHHTTSEEEEEEEEECCCCT
T ss_pred             HHHHHHHHhcCCEEEEEeCCC
Confidence            344433322268898887654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=93.15  E-value=0.17  Score=38.44  Aligned_cols=81  Identities=14%  Similarity=0.135  Sum_probs=50.0

Q ss_pred             ccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      .+.|+ +|++++++.++++...+++..  .   ..+|.++.+..+.+.+... +++|++|+|+|.             +.
T Consensus       182 ~~~Ga~~Vi~~~~~~~~~~~~~~~~g~--~---~~~d~~~~~~~~~~~~~~~-~~~d~vi~~~G~-------------~~  242 (357)
T 2zb4_A          182 HFLGCSRVVGICGTHEKCILLTSELGF--D---AAINYKKDNVAEQLRESCP-AGVDVYFDNVGG-------------NI  242 (357)
T ss_dssp             HHTTCSEEEEEESCHHHHHHHHHTSCC--S---EEEETTTSCHHHHHHHHCT-TCEEEEEESCCH-------------HH
T ss_pred             HHCCCCeEEEEeCCHHHHHHHHHHcCC--c---eEEecCchHHHHHHHHhcC-CCCCEEEECCCH-------------HH
Confidence            46799 999999998887766554543  1   2357776443333333221 279999999993             12


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      +...++.--..|+++.++...
T Consensus       243 ~~~~~~~l~~~G~iv~~G~~~  263 (357)
T 2zb4_A          243 SDTVISQMNENSHIILCGQIS  263 (357)
T ss_dssp             HHHHHHTEEEEEEEEECCCGG
T ss_pred             HHHHHHHhccCcEEEEECCcc
Confidence            333433222268888887654

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=93.08  E-value=0.2  Score=38.19  Aligned_cols=81  Identities=9%  Similarity=0.071  Sum_probs=49.9

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ...|++|++++|++++++.. +++..  .   ..+|.++.+..+.+.+.....++|++|+|+|..             .+
T Consensus       184 ~~~Ga~Vi~~~~~~~~~~~~-~~~g~--~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~G~~-------------~~  244 (354)
T 2j8z_A          184 RMAGAIPLVTAGSQKKLQMA-EKLGA--A---AGFNYKKEDFSEATLKFTKGAGVNLILDCIGGS-------------YW  244 (354)
T ss_dssp             HHTTCEEEEEESCHHHHHHH-HHHTC--S---EEEETTTSCHHHHHHHHTTTSCEEEEEESSCGG-------------GH
T ss_pred             HHcCCEEEEEeCCHHHHHHH-HHcCC--c---EEEecCChHHHHHHHHHhcCCCceEEEECCCch-------------HH
Confidence            46799999999998877765 45543  2   335777655445444432224699999999942             02


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      ...++.--..|+++.++...
T Consensus       245 ~~~~~~l~~~G~iv~~G~~~  264 (354)
T 2j8z_A          245 EKNVNCLALDGRWVLYGLMG  264 (354)
T ss_dssp             HHHHHHEEEEEEEEECCCTT
T ss_pred             HHHHHhccCCCEEEEEeccC
Confidence            33332222268888887543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=92.70  E-value=0.23  Score=32.33  Aligned_cols=55  Identities=5%  Similarity=-0.023  Sum_probs=41.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.+.|++|++++++++..+...+ .    .+.++.+|.++.+.+.++--    ...|.+|.+.+
T Consensus        26 L~~~g~~v~vid~~~~~~~~~~~-~----g~~~i~gd~~~~~~l~~a~i----~~ad~vi~~~~   80 (140)
T 3fwz_A           26 LLASDIPLVVIETSRTRVDELRE-R----GVRAVLGNAANEEIMQLAHL----ECAKWLILTIP   80 (140)
T ss_dssp             HHHTTCCEEEEESCHHHHHHHHH-T----TCEEEESCTTSHHHHHHTTG----GGCSEEEECCS
T ss_pred             HHHCCCCEEEEECCHHHHHHHHH-c----CCCEEECCCCCHHHHHhcCc----ccCCEEEEECC
Confidence            56789999999999988877654 1    46678899999887665411    24688888776

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=92.69  E-value=0.25  Score=37.21  Aligned_cols=81  Identities=14%  Similarity=0.169  Sum_probs=51.5

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ...|++|+++++++++++...+++..  .   ..+|.++.+..+.+.+.. .+++|++|+|+|..             .+
T Consensus       171 ~~~Ga~Vi~~~~~~~~~~~~~~~~g~--~---~~~~~~~~~~~~~~~~~~-~~~~d~vi~~~g~~-------------~~  231 (336)
T 4b7c_A          171 RLKGCRVVGIAGGAEKCRFLVEELGF--D---GAIDYKNEDLAAGLKREC-PKGIDVFFDNVGGE-------------IL  231 (336)
T ss_dssp             HHTTCEEEEEESSHHHHHHHHHTTCC--S---EEEETTTSCHHHHHHHHC-TTCEEEEEESSCHH-------------HH
T ss_pred             HHCCCEEEEEeCCHHHHHHHHHHcCC--C---EEEECCCHHHHHHHHHhc-CCCceEEEECCCcc-------------hH
Confidence            46899999999999888776565543  1   234666654444333322 24799999999931             23


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      ...++.--..|+++.++...
T Consensus       232 ~~~~~~l~~~G~iv~~G~~~  251 (336)
T 4b7c_A          232 DTVLTRIAFKARIVLCGAIS  251 (336)
T ss_dssp             HHHHTTEEEEEEEEECCCGG
T ss_pred             HHHHHHHhhCCEEEEEeecc
Confidence            34433322378899887654

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=92.46  E-value=0.26  Score=37.50  Aligned_cols=79  Identities=6%  Similarity=0.051  Sum_probs=48.1

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ...|++|+++++++++++. .+++..  .   ..+|.++.+..+.+.+.....++|++|+|+|..             .+
T Consensus       192 ~~~Ga~Vi~~~~~~~~~~~-~~~~ga--~---~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~G~~-------------~~  252 (351)
T 1yb5_A          192 RAYGLKILGTAGTEEGQKI-VLQNGA--H---EVFNHREVNYIDKIKKYVGEKGIDIIIEMLANV-------------NL  252 (351)
T ss_dssp             HHTTCEEEEEESSHHHHHH-HHHTTC--S---EEEETTSTTHHHHHHHHHCTTCEEEEEESCHHH-------------HH
T ss_pred             HHCCCEEEEEeCChhHHHH-HHHcCC--C---EEEeCCCchHHHHHHHHcCCCCcEEEEECCChH-------------HH
Confidence            4679999999999887774 344433  1   235777755444444332223699999999931             13


Q ss_pred             HHhhheeecceeEEEecc
Q 042200           83 KRVMIMVVFLGVLLFTAN  100 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss  100 (181)
                      ...++.--..|+++.++.
T Consensus       253 ~~~~~~l~~~G~iv~~g~  270 (351)
T 1yb5_A          253 SKDLSLLSHGGRVIVVGS  270 (351)
T ss_dssp             HHHHHHEEEEEEEEECCC
T ss_pred             HHHHHhccCCCEEEEEec
Confidence            333322222688888764

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=92.03  E-value=1.2  Score=33.50  Aligned_cols=80  Identities=15%  Similarity=0.023  Sum_probs=47.9

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      .+.|++|+++++++++++... ++..  .   ..+|.++.+ +...+.+ ....++|++|+++| . .   .        
T Consensus       188 ~~~G~~Vi~~~~~~~~~~~~~-~~ga--~---~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g-~-~---~--------  247 (343)
T 2eih_A          188 KLFGARVIATAGSEDKLRRAK-ALGA--D---ETVNYTHPD-WPKEVRRLTGGKGADKVVDHTG-A-L---Y--------  247 (343)
T ss_dssp             HHTTCEEEEEESSHHHHHHHH-HHTC--S---EEEETTSTT-HHHHHHHHTTTTCEEEEEESSC-S-S---S--------
T ss_pred             HHCCCEEEEEeCCHHHHHHHH-hcCC--C---EEEcCCccc-HHHHHHHHhCCCCceEEEECCC-H-H---H--------
Confidence            357999999999988776653 4433  2   125777654 3333333 22247999999999 2 1   1        


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      +...++.--..|+++.+++..
T Consensus       248 ~~~~~~~l~~~G~~v~~g~~~  268 (343)
T 2eih_A          248 FEGVIKATANGGRIAIAGASS  268 (343)
T ss_dssp             HHHHHHHEEEEEEEEESSCCC
T ss_pred             HHHHHHhhccCCEEEEEecCC
Confidence            222322222268888887654

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=91.90  E-value=0.38  Score=33.79  Aligned_cols=56  Identities=13%  Similarity=0.234  Sum_probs=42.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.+.|++|++++++++..+...+..    .+.++.+|.++.+.+.++--    ...|.+|.+.+
T Consensus        19 L~~~g~~v~vid~~~~~~~~l~~~~----~~~~i~gd~~~~~~l~~a~i----~~ad~vi~~~~   74 (218)
T 3l4b_C           19 MLSRKYGVVIINKDRELCEEFAKKL----KATIIHGDGSHKEILRDAEV----SKNDVVVILTP   74 (218)
T ss_dssp             HHHTTCCEEEEESCHHHHHHHHHHS----SSEEEESCTTSHHHHHHHTC----CTTCEEEECCS
T ss_pred             HHhCCCeEEEEECCHHHHHHHHHHc----CCeEEEcCCCCHHHHHhcCc----ccCCEEEEecC
Confidence            5678999999999999888765543    36678999999887765522    34688887765

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=90.46  E-value=0.36  Score=35.38  Aligned_cols=55  Identities=13%  Similarity=0.135  Sum_probs=36.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++.|++|++++|+.++++++.+++.....     ++..+.+++      .. +..|+||||++...
T Consensus       138 L~~~G~~V~v~~R~~~~~~~la~~~~~~~~-----~~~~~~~~~------~~-~~~DivVn~t~~~~  192 (271)
T 1nyt_A          138 LLSLDCAVTITNRTVSRAEELAKLFAHTGS-----IQALSMDEL------EG-HEFDLIINATSSGI  192 (271)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHTGGGSS-----EEECCSGGG------TT-CCCSEEEECCSCGG
T ss_pred             HHHcCCEEEEEECCHHHHHHHHHHhhccCC-----eeEecHHHh------cc-CCCCEEEECCCCCC
Confidence            567899999999999888888776643111     223332221      12 56899999999753

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=89.83  E-value=0.72  Score=34.64  Aligned_cols=81  Identities=19%  Similarity=0.221  Sum_probs=48.3

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ...|++|++++++.++++. .+++..  .   ...|.++.+..+.+.+.....++|++|+|+|..             .+
T Consensus       170 ~~~Ga~Vi~~~~~~~~~~~-~~~~ga--~---~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~-------------~~  230 (334)
T 3qwb_A          170 KMKGAHTIAVASTDEKLKI-AKEYGA--E---YLINASKEDILRQVLKFTNGKGVDASFDSVGKD-------------TF  230 (334)
T ss_dssp             HHTTCEEEEEESSHHHHHH-HHHTTC--S---EEEETTTSCHHHHHHHHTTTSCEEEEEECCGGG-------------GH
T ss_pred             HHCCCEEEEEeCCHHHHHH-HHHcCC--c---EEEeCCCchHHHHHHHHhCCCCceEEEECCChH-------------HH
Confidence            3579999999999888774 445543  1   234565544444443332224699999999941             12


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      +..++.--..|+++.++...
T Consensus       231 ~~~~~~l~~~G~iv~~G~~~  250 (334)
T 3qwb_A          231 EISLAALKRKGVFVSFGNAS  250 (334)
T ss_dssp             HHHHHHEEEEEEEEECCCTT
T ss_pred             HHHHHHhccCCEEEEEcCCC
Confidence            33333222268888887643

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=89.09  E-value=1  Score=34.19  Aligned_cols=80  Identities=18%  Similarity=0.083  Sum_probs=47.8

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ...|++|+++++++++++... ++..  .   ..+|.++.+..+.+.+.. .+++|++|+|+|..             .+
T Consensus       189 ~~~Ga~Vi~~~~~~~~~~~~~-~lGa--~---~~~~~~~~~~~~~~~~~~-~~g~Dvvid~~g~~-------------~~  248 (353)
T 4dup_A          189 RAFGAEVYATAGSTGKCEACE-RLGA--K---RGINYRSEDFAAVIKAET-GQGVDIILDMIGAA-------------YF  248 (353)
T ss_dssp             HHTTCEEEEEESSHHHHHHHH-HHTC--S---EEEETTTSCHHHHHHHHH-SSCEEEEEESCCGG-------------GH
T ss_pred             HHcCCEEEEEeCCHHHHHHHH-hcCC--C---EEEeCCchHHHHHHHHHh-CCCceEEEECCCHH-------------HH
Confidence            357999999999988876553 4443  1   224665544333333223 35799999999942             12


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      ...++.--..|+++.++...
T Consensus       249 ~~~~~~l~~~G~iv~~g~~~  268 (353)
T 4dup_A          249 ERNIASLAKDGCLSIIAFLG  268 (353)
T ss_dssp             HHHHHTEEEEEEEEECCCTT
T ss_pred             HHHHHHhccCCEEEEEEecC
Confidence            33333222268888877543

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=88.84  E-value=0.88  Score=34.35  Aligned_cols=81  Identities=12%  Similarity=0.114  Sum_probs=47.1

Q ss_pred             cC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            4 QH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         4 ~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      +. |++|+++++++++++.. +++..  .   ..+|.++.+..+.+.+....+++|++|+|+|..            ..+
T Consensus       193 ~~~Ga~Vi~~~~~~~~~~~~-~~~g~--~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~------------~~~  254 (347)
T 1jvb_A          193 AVSGATIIGVDVREEAVEAA-KRAGA--D---YVINASMQDPLAEIRRITESKGVDAVIDLNNSE------------KTL  254 (347)
T ss_dssp             HHTCCEEEEEESSHHHHHHH-HHHTC--S---EEEETTTSCHHHHHHHHTTTSCEEEEEESCCCH------------HHH
T ss_pred             HcCCCeEEEEcCCHHHHHHH-HHhCC--C---EEecCCCccHHHHHHHHhcCCCceEEEECCCCH------------HHH
Confidence            45 99999999998877655 44433  2   224666654433333322115799999999942            112


Q ss_pred             HHhhheeecceeEEEecccc
Q 042200           83 KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~  102 (181)
                      +..++.--..|+++.++...
T Consensus       255 ~~~~~~l~~~G~iv~~g~~~  274 (347)
T 1jvb_A          255 SVYPKALAKQGKYVMVGLFG  274 (347)
T ss_dssp             TTGGGGEEEEEEEEECCSSC
T ss_pred             HHHHHHHhcCCEEEEECCCC
Confidence            22322222268888877543

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=88.68  E-value=0.43  Score=32.47  Aligned_cols=56  Identities=4%  Similarity=-0.008  Sum_probs=38.8

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.+. |++|+++++++++.+.... .    .+..+.+|.++.+.+.++   ....+.|.||.+.+
T Consensus        58 L~~~~g~~V~vid~~~~~~~~~~~-~----g~~~~~gd~~~~~~l~~~---~~~~~ad~vi~~~~  114 (183)
T 3c85_A           58 LRARYGKISLGIEIREEAAQQHRS-E----GRNVISGDATDPDFWERI---LDTGHVKLVLLAMP  114 (183)
T ss_dssp             HHHHHCSCEEEEESCHHHHHHHHH-T----TCCEEECCTTCHHHHHTB---CSCCCCCEEEECCS
T ss_pred             HHhccCCeEEEEECCHHHHHHHHH-C----CCCEEEcCCCCHHHHHhc---cCCCCCCEEEEeCC
Confidence            4566 9999999999988776543 2    345677899887765543   01235799998776

>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A

Probab=88.66  E-value=0.54  Score=35.51  Aligned_cols=113  Identities=11%  Similarity=0.076  Sum_probs=57.5

Q ss_pred             EEEEeecc----hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH-
Q 042200            8 KVIIADVQ----DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV-   82 (181)
Q Consensus         8 ~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~-   82 (181)
                      +|++++++    .++++.....+... ...+ ..|++...+....++     ..|+|||+||.....     ..+.+++ 
T Consensus        38 ev~l~Di~~~~~~~~~~g~~~dl~~~-~~~~-~~~i~~~~~~~~al~-----~aD~Vi~~ag~~~~~-----g~~r~dl~  105 (329)
T 1b8p_A           38 ILQLLEIPNEKAQKALQGVMMEIDDC-AFPL-LAGMTAHADPMTAFK-----DADVALLVGARPRGP-----GMERKDLL  105 (329)
T ss_dssp             EEEEECCSCHHHHHHHHHHHHHHHTT-TCTT-EEEEEEESSHHHHTT-----TCSEEEECCCCCCCT-----TCCHHHHH
T ss_pred             EEEEEcCCCccccccchhhHHHHhhh-cccc-cCcEEEecCcHHHhC-----CCCEEEEeCCCCCCC-----CCCHHHHH
Confidence            79999998    55555444444321 0111 235554444555554     479999999975431     1222221 


Q ss_pred             HHhhheeec-----------ceeEEEecccccc--------c-cCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           83 KRVMIMVVF-----------LGVLLFTANLATE--------T-IGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        83 ~~~~~~n~~-----------~~~iv~iss~~~~--------~-~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      ...+.+-..           .+.+|++|.....        . ++|+...++.+..--..+...++..+.
T Consensus       106 ~~N~~i~~~i~~~i~~~~~p~a~ii~~SNPv~~~t~~~~~~~~~~p~~~v~g~t~Ld~~r~~~~la~~lg  175 (329)
T 1b8p_A          106 EANAQIFTVQGKAIDAVASRNIKVLVVGNPANTNAYIAMKSAPSLPAKNFTAMLRLDHNRALSQIAAKTG  175 (329)
T ss_dssp             HHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTTSCGGGEEECCHHHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHhcCCCeEEEEccCchHHHHHHHHHHcCCCCHHHEEEeecHHHHHHHHHHHHHhC
Confidence            111111110           2478888875531        1 334444566665444445555665553

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=88.57  E-value=1  Score=33.69  Aligned_cols=80  Identities=14%  Similarity=0.089  Sum_probs=48.3

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|+++++++++++... ++..  .   ...|.++.+..+.+.+.....++|++|+|+|..             .+.
T Consensus       163 ~~Ga~Vi~~~~~~~~~~~~~-~~Ga--~---~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~-------------~~~  223 (325)
T 3jyn_A          163 ALGAKLIGTVSSPEKAAHAK-ALGA--W---ETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQD-------------TWL  223 (325)
T ss_dssp             HHTCEEEEEESSHHHHHHHH-HHTC--S---EEEETTTSCHHHHHHHHTTTCCEEEEEESSCGG-------------GHH
T ss_pred             HCCCEEEEEeCCHHHHHHHH-HcCC--C---EEEeCCCccHHHHHHHHhCCCCceEEEECCChH-------------HHH
Confidence            57999999999988777553 4543  1   234666654444443332224699999999941             123


Q ss_pred             HhhheeecceeEEEecccc
Q 042200           84 RVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        84 ~~~~~n~~~~~iv~iss~~  102 (181)
                      ..++.--.+|+++.++...
T Consensus       224 ~~~~~l~~~G~iv~~g~~~  242 (325)
T 3jyn_A          224 TSLDSVAPRGLVVSFGNAS  242 (325)
T ss_dssp             HHHTTEEEEEEEEECCCTT
T ss_pred             HHHHHhcCCCEEEEEecCC
Confidence            3333222278888887654

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=88.31  E-value=0.91  Score=34.11  Aligned_cols=61  Identities=8%  Similarity=0.071  Sum_probs=39.4

Q ss_pred             cccCCC-EEEEeecc---hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRA-KVIIADVQ---DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~---~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++.|+ +|.++.|+   .++++++.+++...........+..+.+.+...+.     ..|+|||+....
T Consensus       167 L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~-----~~DiIINaTp~G  231 (312)
T 3t4e_A          167 AAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALA-----SADILTNGTKVG  231 (312)
T ss_dssp             HHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----HCSEEEECSSTT
T ss_pred             HHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhcc-----CceEEEECCcCC
Confidence            677898 79999999   88888877766432112233445555433344444     268999988753

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=87.97  E-value=1.6  Score=33.20  Aligned_cols=77  Identities=12%  Similarity=0.103  Sum_probs=46.6

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|++++++.++++...+++..  .   ..+|.++.+.+.++     .+++|++|+++|....         .   +
T Consensus       209 ~~Ga~Vi~~~~~~~~~~~~~~~lGa--~---~v~~~~~~~~~~~~-----~~~~D~vid~~g~~~~---------~---~  266 (366)
T 1yqd_A          209 AFGSKVTVISTSPSKKEEALKNFGA--D---SFLVSRDQEQMQAA-----AGTLDGIIDTVSAVHP---------L---L  266 (366)
T ss_dssp             HTTCEEEEEESCGGGHHHHHHTSCC--S---EEEETTCHHHHHHT-----TTCEEEEEECCSSCCC---------S---H
T ss_pred             HCCCEEEEEeCCHHHHHHHHHhcCC--c---eEEeccCHHHHHHh-----hCCCCEEEECCCcHHH---------H---H
Confidence            5789999999988877766555543  1   22466665443322     1469999999995321         1   1


Q ss_pred             HhhheeecceeEEEecccc
Q 042200           84 RVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        84 ~~~~~n~~~~~iv~iss~~  102 (181)
                      ..++.--..|+++.+++..
T Consensus       267 ~~~~~l~~~G~iv~~g~~~  285 (366)
T 1yqd_A          267 PLFGLLKSHGKLILVGAPE  285 (366)
T ss_dssp             HHHHHEEEEEEEEECCCCS
T ss_pred             HHHHHHhcCCEEEEEccCC
Confidence            1221111268888887654

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=87.21  E-value=1.3  Score=28.70  Aligned_cols=52  Identities=21%  Similarity=0.368  Sum_probs=35.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |.+.|++|++.+|+.++.+++.+++..  .  ..  +.   +++...+.     ..|+||.+.+..
T Consensus        40 l~~~g~~v~v~~r~~~~~~~~a~~~~~--~--~~--~~---~~~~~~~~-----~~Divi~at~~~   91 (144)
T 3oj0_A           40 FSYPQYKVTVAGRNIDHVRAFAEKYEY--E--YV--LI---NDIDSLIK-----NNDVIITATSSK   91 (144)
T ss_dssp             CCTTTCEEEEEESCHHHHHHHHHHHTC--E--EE--EC---SCHHHHHH-----TCSEEEECSCCS
T ss_pred             HHhCCCEEEEEcCCHHHHHHHHHHhCC--c--eE--ee---cCHHHHhc-----CCCEEEEeCCCC
Confidence            566898999999999988887776642  1  11  22   23344444     369999998864

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=87.14  E-value=1.1  Score=33.40  Aligned_cols=56  Identities=14%  Similarity=0.189  Sum_probs=37.3

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++.|+ +|++.+|+.++++++.+.+.....      ++.+.+++...+.     ..|+||++.+...
T Consensus       160 L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~------~~~~~~~~~~~~~-----~aDivIn~t~~~~  216 (297)
T 2egg_A          160 LLSTAAERIDMANRTVEKAERLVREGDERRS------AYFSLAEAETRLA-----EYDIIINTTSVGM  216 (297)
T ss_dssp             HHTTTCSEEEEECSSHHHHHHHHHHSCSSSC------CEECHHHHHHTGG-----GCSEEEECSCTTC
T ss_pred             HHHCCCCEEEEEeCCHHHHHHHHHHhhhccC------ceeeHHHHHhhhc-----cCCEEEECCCCCC
Confidence            567898 899999999999888877653110      1112233333333     4799999998653

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=86.85  E-value=6.4  Score=28.25  Aligned_cols=59  Identities=20%  Similarity=0.393  Sum_probs=41.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcC-------------------CCCceEEEeeecCChhHHHHHHHhcccCCccEEEE
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFD-------------------SDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFN   62 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~-------------------~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~   62 (181)
                      |+++|++|+.++.++..++.+.+...                   ...++.++.+|+.+...     .  ..++.|+|+.
T Consensus        86 La~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~-----~--~~~~FD~V~~  158 (252)
T 2gb4_A           86 FADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPR-----A--NIGKFDRIWD  158 (252)
T ss_dssp             HHHTTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGG-----G--CCCCEEEEEE
T ss_pred             HHHCCCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCc-----c--cCCCEEEEEE
Confidence            67889999999999888877655442                   11468899999877431     1  1256899987


Q ss_pred             ccccc
Q 042200           63 NAGII   67 (181)
Q Consensus        63 ~ag~~   67 (181)
                      ++...
T Consensus       159 ~~~l~  163 (252)
T 2gb4_A          159 RGALV  163 (252)
T ss_dssp             SSSTT
T ss_pred             hhhhh
Confidence            65543

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=86.84  E-value=0.92  Score=34.15  Aligned_cols=79  Identities=11%  Similarity=0.071  Sum_probs=46.7

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|+++++++++++.+. ++..  .   ...|.++.+..+.+.+.....++|++|+|+|...             ..
T Consensus       167 ~~Ga~Vi~~~~~~~~~~~~~-~lga--~---~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~~~-------------~~  227 (340)
T 3gms_A          167 ILNFRLIAVTRNNKHTEELL-RLGA--A---YVIDTSTAPLYETVMELTNGIGADAAIDSIGGPD-------------GN  227 (340)
T ss_dssp             HHTCEEEEEESSSTTHHHHH-HHTC--S---EEEETTTSCHHHHHHHHTTTSCEEEEEESSCHHH-------------HH
T ss_pred             HcCCEEEEEeCCHHHHHHHH-hCCC--c---EEEeCCcccHHHHHHHHhCCCCCcEEEECCCChh-------------HH
Confidence            57999999999887776543 3443  2   2236655443333333222247999999999531             12


Q ss_pred             Hhhheeec-ceeEEEecccc
Q 042200           84 RVMIMVVF-LGVLLFTANLA  102 (181)
Q Consensus        84 ~~~~~n~~-~~~iv~iss~~  102 (181)
                      ..++ .+. +|+++.++...
T Consensus       228 ~~~~-~l~~~G~iv~~G~~~  246 (340)
T 3gms_A          228 ELAF-SLRPNGHFLTIGLLS  246 (340)
T ss_dssp             HHHH-TEEEEEEEEECCCTT
T ss_pred             HHHH-HhcCCCEEEEEeecC
Confidence            2222 122 78999887644

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=86.74  E-value=1.9  Score=31.50  Aligned_cols=55  Identities=13%  Similarity=0.244  Sum_probs=35.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++.|++|++++|+.++++++.+.+.....+.  .+|+   +++      .. +..|+|||+++...
T Consensus       138 L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~--~~~~---~~~------~~-~~~DivIn~t~~~~  192 (272)
T 1p77_A          138 LLQAQQNIVLANRTFSKTKELAERFQPYGNIQ--AVSM---DSI------PL-QTYDLVINATSAGL  192 (272)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHGGGSCEE--EEEG---GGC------CC-SCCSEEEECCCC--
T ss_pred             HHHCCCEEEEEECCHHHHHHHHHHccccCCeE--EeeH---HHh------cc-CCCCEEEECCCCCC
Confidence            56789999999999988888877654211121  2232   111      11 36899999999754

>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23

Probab=86.44  E-value=2.2  Score=31.62  Aligned_cols=62  Identities=13%  Similarity=0.101  Sum_probs=44.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      |++++.+|+.+|++++.++.+.+ +.. .++.++..|..+.+   ..+.+...+++|+|+.+-|...
T Consensus        40 il~~~g~VigiD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~---~~L~~~g~~~vDgIL~DLGvSS  101 (285)
T 1wg8_A           40 ILERGGRVIGLDQDPEAVARAKG-LHL-PGLTVVQGNFRHLK---RHLAALGVERVDGILADLGVSS  101 (285)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHH-TCC-TTEEEEESCGGGHH---HHHHHTTCSCEEEEEEECSCCH
T ss_pred             HHHCCCEEEEEeCCHHHHHHHHh-hcc-CCEEEEECCcchHH---HHHHHcCCCCcCEEEeCCcccc
Confidence            34457799999999988877666 644 57999988887644   4444411257999999888643

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=86.17  E-value=2.6  Score=31.89  Aligned_cols=83  Identities=8%  Similarity=-0.001  Sum_probs=50.9

Q ss_pred             cCCCE-EEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            4 QHRAK-VIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         4 ~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      ..|++ |+++++++++++...+ +..  .+..+..|-.+.+++...+.+ ....++|++|.++|..            ..
T Consensus       201 ~~Ga~~Vi~~~~~~~~~~~a~~-l~~--~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~------------~~  265 (363)
T 3m6i_A          201 AAGACPLVITDIDEGRLKFAKE-ICP--EVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVE------------SS  265 (363)
T ss_dssp             HTTCCSEEEEESCHHHHHHHHH-HCT--TCEEEECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCH------------HH
T ss_pred             HcCCCEEEEECCCHHHHHHHHH-hch--hcccccccccchHHHHHHHHHHhCCCCCCEEEECCCCh------------HH
Confidence            57887 9999998887776543 422  344455555556666666655 3334799999999842            11


Q ss_pred             HHHhhheeecceeEEEeccc
Q 042200           82 VKRVMIMVVFLGVLLFTANL  101 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~  101 (181)
                      +...++.--..|+++.++..
T Consensus       266 ~~~~~~~l~~~G~iv~~G~~  285 (363)
T 3m6i_A          266 IAAAIWAVKFGGKVFVIGVG  285 (363)
T ss_dssp             HHHHHHHSCTTCEEEECCCC
T ss_pred             HHHHHHHhcCCCEEEEEccC
Confidence            33333322226888887653

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=85.82  E-value=2.5  Score=33.48  Aligned_cols=56  Identities=13%  Similarity=0.175  Sum_probs=41.3

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.++|++|++++++++.++.+.+.+    .+..+.+|.++.+-++++=-    ...|.+|-..+
T Consensus        22 L~~~~~~v~vId~d~~~~~~~~~~~----~~~~i~Gd~~~~~~L~~Agi----~~ad~~ia~t~   77 (461)
T 4g65_A           22 LVGENNDITIVDKDGDRLRELQDKY----DLRVVNGHASHPDVLHEAGA----QDADMLVAVTN   77 (461)
T ss_dssp             TCSTTEEEEEEESCHHHHHHHHHHS----SCEEEESCTTCHHHHHHHTT----TTCSEEEECCS
T ss_pred             HHHCCCCEEEEECCHHHHHHHHHhc----CcEEEEEcCCCHHHHHhcCC----CcCCEEEEEcC
Confidence            6789999999999999998877766    36678889998887765522    23456655443

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=85.57  E-value=0.36  Score=35.76  Aligned_cols=57  Identities=18%  Similarity=0.281  Sum_probs=37.1

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |++.|+ +|++++|+.++++++.+++... ..+.....+.   +++...+..     .|+|||+...
T Consensus       146 L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~---~~l~~~l~~-----~DiVInaTp~  204 (283)
T 3jyo_A          146 LVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDA---RGIEDVIAA-----ADGVVNATPM  204 (283)
T ss_dssp             HHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECS---TTHHHHHHH-----SSEEEECSST
T ss_pred             HHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCH---HHHHHHHhc-----CCEEEECCCC
Confidence            567898 6999999999888887766431 1122223333   345455552     6999999865

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=85.43  E-value=1.5  Score=31.07  Aligned_cols=52  Identities=12%  Similarity=0.095  Sum_probs=38.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHH-HHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNV-FDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~-~~~~~~~~id~vi~~ag   65 (181)
                      |.+.|+ |++++++++..+...   .   .+.++.+|.++.+.+.++ ++     ..|.||.+.+
T Consensus        28 L~~~g~-v~vid~~~~~~~~~~---~---~~~~i~gd~~~~~~l~~a~i~-----~ad~vi~~~~   80 (234)
T 2aef_A           28 LRGSEV-FVLAEDENVRKKVLR---S---GANFVHGDPTRVSDLEKANVR-----GARAVIVDLE   80 (234)
T ss_dssp             STTSEE-EEEESCGGGHHHHHH---T---TCEEEESCTTCHHHHHHTTCT-----TCSEEEECCS
T ss_pred             HHhCCe-EEEEECCHHHHHHHh---c---CCeEEEcCCCCHHHHHhcCcc-----hhcEEEEcCC
Confidence            567889 999999988776554   2   477889999998877655 33     4688887765

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=84.63  E-value=2.2  Score=32.13  Aligned_cols=79  Identities=15%  Similarity=0.024  Sum_probs=42.9

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      ...|++|++++++.++++.. +++..  . ..  .|..  +++...+.+ ....++|++|+|+|..          .   
T Consensus       181 ~~~Ga~Vi~~~~~~~~~~~~-~~~ga--~-~v--~~~~--~~~~~~v~~~~~~~g~Dvvid~~g~~----------~---  239 (342)
T 4eye_A          181 KGMGAKVIAVVNRTAATEFV-KSVGA--D-IV--LPLE--EGWAKAVREATGGAGVDMVVDPIGGP----------A---  239 (342)
T ss_dssp             HHTTCEEEEEESSGGGHHHH-HHHTC--S-EE--EESS--TTHHHHHHHHTTTSCEEEEEESCC------------C---
T ss_pred             HHcCCEEEEEeCCHHHHHHH-HhcCC--c-EE--ecCc--hhHHHHHHHHhCCCCceEEEECCchh----------H---
Confidence            35799999999988777544 44443  1 22  2444  334444443 2223699999999942          1   


Q ss_pred             HHHhhheeecceeEEEecccc
Q 042200           82 VKRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~~  102 (181)
                      +...++.--..|+++.++...
T Consensus       240 ~~~~~~~l~~~G~iv~~G~~~  260 (342)
T 4eye_A          240 FDDAVRTLASEGRLLVVGFAA  260 (342)
T ss_dssp             HHHHHHTEEEEEEEEEC----
T ss_pred             HHHHHHhhcCCCEEEEEEccC
Confidence            233333222268888877543

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=84.19  E-value=1.7  Score=33.23  Aligned_cols=57  Identities=14%  Similarity=0.130  Sum_probs=36.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      +...|++|++++|+.++++...+....  .+   .++..+.+++...+.     ..|+||++++...
T Consensus       186 a~~~Ga~V~v~dr~~~r~~~~~~~~~~--~~---~~~~~~~~~~~~~~~-----~~DvVI~~~~~~~  242 (361)
T 1pjc_A          186 AVGLGAQVQIFDINVERLSYLETLFGS--RV---ELLYSNSAEIETAVA-----EADLLIGAVLVPG  242 (361)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHHGG--GS---EEEECCHHHHHHHHH-----TCSEEEECCCCTT
T ss_pred             HHhCCCEEEEEeCCHHHHHHHHHhhCc--ee---EeeeCCHHHHHHHHc-----CCCEEEECCCcCC
Confidence            456899999999999888776544322  22   122334455544444     4799999998643

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=83.62  E-value=0.76  Score=30.34  Aligned_cols=57  Identities=14%  Similarity=0.045  Sum_probs=36.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGI   66 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~   66 (181)
                      |.+.|++|++++|++++.+....   . ..+..+..|.++.+.+...    .....|.||.+.+.
T Consensus        38 L~~~g~~V~vid~~~~~~~~~~~---~-~g~~~~~~d~~~~~~l~~~----~~~~ad~Vi~~~~~   94 (155)
T 2g1u_A           38 ASSSGHSVVVVDKNEYAFHRLNS---E-FSGFTVVGDAAEFETLKEC----GMEKADMVFAFTND   94 (155)
T ss_dssp             HHHTTCEEEEEESCGGGGGGSCT---T-CCSEEEESCTTSHHHHHTT----TGGGCSEEEECSSC
T ss_pred             HHhCCCeEEEEECCHHHHHHHHh---c-CCCcEEEecCCCHHHHHHc----CcccCCEEEEEeCC
Confidence            55789999999999876543221   1 1344666788876654432    11247999998873

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=82.58  E-value=3.1  Score=31.57  Aligned_cols=76  Identities=18%  Similarity=0.229  Sum_probs=43.2

Q ss_pred             cCCCEEEEeecch---HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            4 QHRAKVIIADVQD---DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         4 ~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      ..|++|++++++.   ++++. ++++..    ..+  | ++ +-.+.+.+ .. +++|++|+++|...            
T Consensus       202 ~~Ga~Vi~~~~~~~~~~~~~~-~~~~ga----~~v--~-~~-~~~~~~~~-~~-~~~d~vid~~g~~~------------  258 (366)
T 2cdc_A          202 TYGLEVWMANRREPTEVEQTV-IEETKT----NYY--N-SS-NGYDKLKD-SV-GKFDVIIDATGADV------------  258 (366)
T ss_dssp             HHTCEEEEEESSCCCHHHHHH-HHHHTC----EEE--E-CT-TCSHHHHH-HH-CCEEEEEECCCCCT------------
T ss_pred             hCCCEEEEEeCCccchHHHHH-HHHhCC----cee--c-hH-HHHHHHHH-hC-CCCCEEEECCCChH------------
Confidence            5789999999987   76643 344532    223  5 44 21222221 11 57999999999531            


Q ss_pred             HH-HHhhheeecceeEEEecccc
Q 042200           81 KV-KRVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        81 ~~-~~~~~~n~~~~~iv~iss~~  102 (181)
                      .+ +..++.--..|+++.++...
T Consensus       259 ~~~~~~~~~l~~~G~iv~~g~~~  281 (366)
T 2cdc_A          259 NILGNVIPLLGRNGVLGLFGFST  281 (366)
T ss_dssp             HHHHHHGGGEEEEEEEEECSCCC
T ss_pred             HHHHHHHHHHhcCCEEEEEecCC
Confidence            12 33333222268888887643

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=82.17  E-value=2.9  Score=31.71  Aligned_cols=80  Identities=15%  Similarity=0.037  Sum_probs=47.5

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ..|++|+++++++++++.. +++..  .   ...| .+.+++...+.+ ....++|++|.++|.     ..        +
T Consensus       211 ~~Ga~Vi~~~~~~~~~~~~-~~lGa--~---~vi~-~~~~~~~~~v~~~~~g~g~D~vid~~g~-----~~--------~  270 (363)
T 3uog_A          211 ATGAEVIVTSSSREKLDRA-FALGA--D---HGIN-RLEEDWVERVYALTGDRGADHILEIAGG-----AG--------L  270 (363)
T ss_dssp             HTTCEEEEEESCHHHHHHH-HHHTC--S---EEEE-TTTSCHHHHHHHHHTTCCEEEEEEETTS-----SC--------H
T ss_pred             HcCCEEEEEecCchhHHHH-HHcCC--C---EEEc-CCcccHHHHHHHHhCCCCceEEEECCCh-----HH--------H
Confidence            5799999999998877664 45543  1   1235 443444444444 222379999999992     11        2


Q ss_pred             HHhhheeecceeEEEeccccc
Q 042200           83 KRVMIMVVFLGVLLFTANLAT  103 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~~  103 (181)
                      ...++.--..|+++.++...+
T Consensus       271 ~~~~~~l~~~G~iv~~G~~~~  291 (363)
T 3uog_A          271 GQSLKAVAPDGRISVIGVLEG  291 (363)
T ss_dssp             HHHHHHEEEEEEEEEECCCSS
T ss_pred             HHHHHHhhcCCEEEEEecCCC
Confidence            333322222788888876443

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=81.28  E-value=3.7  Score=31.51  Aligned_cols=56  Identities=18%  Similarity=0.173  Sum_probs=38.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      +...|++|++.+|+.++++...+.+..  .+   .++..+.+++...+.     ..|+||++++..
T Consensus       187 a~~~Ga~V~~~d~~~~~l~~~~~~~g~--~~---~~~~~~~~~l~~~l~-----~aDvVi~~~~~p  242 (377)
T 2vhw_A          187 ANGMGATVTVLDINIDKLRQLDAEFCG--RI---HTRYSSAYELEGAVK-----RADLVIGAVLVP  242 (377)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHTTT--SS---EEEECCHHHHHHHHH-----HCSEEEECCCCT
T ss_pred             HHhCCCEEEEEeCCHHHHHHHHHhcCC--ee---EeccCCHHHHHHHHc-----CCCEEEECCCcC
Confidence            346899999999999888776554543  22   234555666666655     379999998854

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	181
d2bgka1	268	c.2.1.2 (A:11-278) Rhizome secoisolariciresinol de	6e-26
d1spxa_	264	c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nemato	1e-19
d2d1ya1	248	c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {T	3e-19
d2ew8a1	247	c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenas	5e-18
d1zk4a1	251	c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase	7e-18
d1ydea1	250	c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase	1e-17
d1hxha_	253	c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydroge	1e-17
d1xkqa_	272	c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorh	8e-17
d1cyda_	242	c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus muscul	4e-16
d1fmca_	255	c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase	9e-16
d1xhla_	274	c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorh	9e-16
d1gz6a_	302	c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do	2e-15
d1xg5a_	257	c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41	2e-15
d1hdca_	254	c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydr	3e-15
d1xq1a_	259	c.2.1.2 (A:) Tropinone reductase {Thale cress (Ara	1e-14
d1yxma1	297	c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re	1e-14
d1ulsa_	242	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-14
d1pr9a_	244	c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapie	3e-14
d1vl8a_	251	c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga	4e-14
d2a4ka1	241	c.2.1.2 (A:2-242) beta-keto acyl carrier protein r	4e-14
d2ae2a_	259	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	5e-14
d1zmta1	252	c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Ag	1e-13
d2c07a1	251	c.2.1.2 (A:54-304) beta-keto acyl carrier protein	2e-13
d1yb1a_	244	c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase	2e-13
d1w6ua_	294	c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondr	2e-13
d1bdba_	276	c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehy	3e-13
d2gdza1	254	c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrog	4e-13
d1sbya1	254	c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase	5e-13
d2rhca1	257	c.2.1.2 (A:5-261) beta-keto acyl carrier protein r	7e-13
d1nffa_	244	c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycob	3e-12
d1g0oa_	272	c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase	3e-12
d1ae1a_	258	c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datu	7e-12
d1iy8a_	258	c.2.1.2 (A:) Levodione reductase {Corynebacterium	9e-12
d2ag5a1	245	c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami	1e-11
d1gega_	255	c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Kl	2e-11
d1h5qa_	260	c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Aga	2e-11
d1ja9a_	259	c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reduc	5e-11
d1geea_	261	c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megat	6e-11
d1zema1	260	c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconoba	1e-10
d2bd0a1	240	c.2.1.2 (A:2-241) Bacterial sepiapterin reductase	1e-10
d1o5ia_	234	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-10
d1xu9a_	269	c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase	2e-10
d1x1ta1	260	c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydroge	3e-09
d1mxha_	266	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	9e-09
d1dhra_	236	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	1e-08
d1q7ba_	243	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	1e-08
d1edoa_	244	c.2.1.2 (A:) beta-keto acyl carrier protein reduct	2e-08
d1k2wa_	256	c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter s	2e-08
d1uaya_	241	c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogena	2e-08
d1ooea_	235	c.2.1.2 (A:) Dihydropteridin reductase (pteridine	3e-08
d1yo6a1	250	c.2.1.2 (A:1-250) Putative carbonyl reductase snif	1e-07
d1uzma1	237	c.2.1.2 (A:9-245) beta-keto acyl carrier protein r	2e-07
d1wmaa1	275	c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydrox	8e-07
d1oaaa_	259	c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus mus	9e-07
d1jtva_	285	c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroi	7e-06
d1snya_	248	c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly	2e-05
d1qsga_	258	c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli	1e-04
d2o23a1	248	c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydr	6e-04

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} Length = 268

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

 Score = 97.8 bits (243), Expect = 6e-26
 Identities = 80/200 (40%), Positives = 122/200 (61%), Gaps = 20/200 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+++ AKV+IAD+ DD  + +C    S ++IS+V C+VT D DV+N+ D T  K GKLDI
Sbjct: 26  FVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDI 85

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL-----------------GVLLFTANLA 102
           MF N G++S    + L+  NE  KRVM + V+                  G ++FTA+++
Sbjct: 86  MFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASIS 145

Query: 103 TETIGEAL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
           + T GE + + Y  +K+AVLGL  +LC ELG+Y IRVN ++  + A+P   +  G+D   
Sbjct: 146 SFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSR 205

Query: 162 FKELLYASANLKGVVLKAAD 181
            +EL + +ANLKG +L+A D
Sbjct: 206 VEELAHQAANLKGTLLRAED 225

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 264

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 81.2 bits (200), Expect = 1e-19
 Identities = 48/201 (23%), Positives = 80/201 (39%), Gaps = 28/201 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL----ISYVCCNVTIDSDVKNVFDFT--KFG 55
           F +  AKV I     +      ++  +  +    ++ V  +VT D+    +   T  KFG
Sbjct: 25  FAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFG 84

Query: 56  KLDIMFNNAGII--SNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETI------- 106
           KLDI+ NNAG     +  +T      E     +  +    V+  T               
Sbjct: 85  KLDILVNNAGAAIPDSQSKTGTAQSIESYDATL-NLNLRSVIALTKKAVPHLSSTKGEIV 143

Query: 107 -----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
                            Y ++K A+    +N  ++L Q+ IRVNSI+  + AT F  +AM
Sbjct: 144 NISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFG-SAM 202

Query: 156 GIDKKTFKELLYASANLKGVV 176
           G+ ++T K+     A +K  V
Sbjct: 203 GMPEETSKKFYSTMATMKECV 223

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

 Score = 79.9 bits (197), Expect = 3e-19
 Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 28/178 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A V + D++ +      KE       ++   ++  + +     +      G++D+
Sbjct: 25  FAREGALVALCDLRPEG-----KEVAEAIGGAFFQVDLEDERERVRFVEEAAYALGRVDV 79

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT------------------ANL 101
           + NNA I      + L     + +RV+  V     +  +                  A++
Sbjct: 80  LVNNAAI--AAPGSALTVRLPEWRRVL-EVNLTAPMHLSALAAREMRKVGGGAIVNVASV 136

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
                 +    Y  SK  ++ L ++L ++L    IRVN++A    AT     A+ +  
Sbjct: 137 QGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSP 194

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} Length = 247

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

 Score = 76.5 bits (188), Expect = 5e-18
 Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 20/168 (11%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           F    A + IAD+       A  +       +  V C+V+   DV+         FG+ D
Sbjct: 25  FAVEGADIAIADLVPAPEAEAAIRNLGRR--VLTVKCDVSQPGDVEAFGKQVISTFGRCD 82

Query: 59  IMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL--------------GVLLFTANLAT 103
           I+ NNAGI   +    L  +  +K   + +   FL              G ++   +   
Sbjct: 83  ILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTY 142

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
               EA   Y+ +K A +G  + L  +LG+  I VN+IA  +  T   
Sbjct: 143 WLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATT 190

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

 Score = 76.2 bits (187), Expect = 7e-18
 Identities = 35/181 (19%), Positives = 76/181 (41%), Gaps = 24/181 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F++  AKV+I     D+     K   + + I +   + + +     +FD T   FG +  
Sbjct: 26  FVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVST 85

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL------------------GVLLFTANL 101
           + NNAGI   ++++  +T   + ++++ + +                      ++  +++
Sbjct: 86  LVNNAGI--AVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSI 143

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVE--LGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
                  +L  Y  SK AV  + K+  ++  L  YD+RVN++      TP   +  G ++
Sbjct: 144 EGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEE 203

Query: 160 K 160
            
Sbjct: 204 A 204

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.7 bits (186), Expect = 1e-17
 Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 20/181 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   A+V+I D  +   RAL +E        ++ C+VT + DVK +   T  +FG+LD 
Sbjct: 26  FVNSGARVVICDKDESGGRALEQELPG---AVFILCDVTQEDDVKTLVSETIRRFGRLDC 82

Query: 60  MFNNAGIISNMDRT--TLDTDNEKVKRVMIMVVFL-------------GVLLFTANLATE 104
           + NNAG      R   T      ++  + ++  +              G ++  ++L   
Sbjct: 83  VVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA 142

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
                   Y+ +K AV  + K L ++   Y +RVN I+     TP +     +       
Sbjct: 143 IGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRAS 202

Query: 165 L 165
           +
Sbjct: 203 I 203

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} Length = 253

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

 Score = 75.4 bits (185), Expect = 1e-17
 Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 22/190 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   AKV  +D+ +   + L  E     +  +V  +V+ ++D   V      + G L++
Sbjct: 26  LLGEGAKVAFSDINEAAGQQLAAELGERSM--FVRHDVSSEADWTLVMAAVQRRLGTLNV 83

Query: 60  MFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL-------------GVLLFTANLATET 105
           + NNAGI+   D  T   ++  ++ ++    VF+             G ++  A++++  
Sbjct: 84  LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWL 143

Query: 106 IGEALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIAHIVSATPFFCNAMGIDKKTFK 163
             E    Y  SK AV  L +   +   +  Y IRVNSI      TP    ++   K   K
Sbjct: 144 PIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASL--PKGVSK 201

Query: 164 ELLYASANLK 173
           E++     L 
Sbjct: 202 EMVLHDPKLN 211

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 73.5 bits (180), Expect = 8e-17
 Identities = 38/200 (19%), Positives = 78/200 (39%), Gaps = 26/200 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL----ISYVCCNVTIDSDVKNVFDFT--KFG 55
           F Q  A V I     +      +      +    ++ V  +VT +     + + T  +FG
Sbjct: 25  FAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFG 84

Query: 56  KLDIMFNNAGII--SNMDRTTLDTDNEKVKRVM---IMVVFL--------------GVLL 96
           K+D++ NNAG         T  D   +   + +   +  V                 ++ 
Sbjct: 85  KIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVN 144

Query: 97  FTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG 156
            ++ +A          Y ++K A+    ++  ++L ++ IRVNS++  +  T F  NAMG
Sbjct: 145 VSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFT-NAMG 203

Query: 157 IDKKTFKELLYASANLKGVV 176
           +  +  ++     A+ K  +
Sbjct: 204 MPDQASQKFYNFMASHKECI 223

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 71.2 bits (174), Expect = 4e-16
 Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 26/183 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
                AKV+     +    +L KE      I  VC ++      +        G +D++ 
Sbjct: 25  LHASGAKVVAVTRTNSDLVSLAKECPG---IEPVCVDLGDWDATEKALG--GIGPVDLLV 79

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTANLAT 103
           NNA +   + +  L+   E   R   + +                    G ++  +++  
Sbjct: 80  NNAAL--VIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA 137

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFK 163
                 L  Y  +K A+  L K + +ELG + IRVNS+   V  T      +  D +  +
Sbjct: 138 HVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMG-KKVSADPEFAR 196

Query: 164 ELL 166
           +L 
Sbjct: 197 KLK 199

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

 Score = 70.5 bits (172), Expect = 9e-16
 Identities = 36/174 (20%), Positives = 61/174 (35%), Gaps = 23/174 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           F    A V+++D+  D    +  E            C++T + ++  + DF   K GK+D
Sbjct: 31  FATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVD 90

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKY 118
           I+ NNAG          D      +R   + VF    L                  ++  
Sbjct: 91  ILVNNAGG---GGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSM 147

Query: 119 -----------------AVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
                            A   L++N+  +LG+ +IRVN IA     T    + +
Sbjct: 148 AAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVI 201

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} Length = 274

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 70.8 bits (173), Expect = 9e-16
 Identities = 45/199 (22%), Positives = 76/199 (38%), Gaps = 26/199 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDFT--KFG 55
           F +  A+V I    +D      ++        E I+ V  +VT  S   ++ + T  KFG
Sbjct: 24  FAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG 83

Query: 56  KLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTAN--------------- 100
           K+DI+ NNAG          D   E  ++    + F  V+  T                 
Sbjct: 84  KIDILVNNAGANLADGTANTDQPVELYQKTF-KLNFQAVIEMTQKTKEHLIKTKGEIVNV 142

Query: 101 ---LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI 157
              +A          Y  +K A+    +   ++L Q+ +RVNS++    AT F   AMG+
Sbjct: 143 SSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFM-GAMGL 201

Query: 158 DKKTFKELLYASANLKGVV 176
            +    +L     + K  +
Sbjct: 202 PETASDKLYSFIGSRKECI 220

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.4 bits (172), Expect = 2e-15
 Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 24/165 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELIS-------YVCCNVTIDSDVKNVFDFT-- 52
           F +  A V++ D+  D          +D+++            N       + +      
Sbjct: 27  FAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTALD 86

Query: 53  KFGKLDIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL--------------GVLLF 97
            FG++D++ NNAGI+ +   + +  ++ + ++RV +   F               G ++ 
Sbjct: 87  TFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIM 146

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA 142
           TA+ +         +Y  +K  +LGL   L +E  + +I  N+IA
Sbjct: 147 TASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIA 191

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.0 bits (171), Expect = 2e-15
 Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 26/189 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFT--KFGK 56
            +Q   KV+           L  E  S      +    C+++ + D+ ++F     +   
Sbjct: 30  LVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 89

Query: 57  LDIMFNNAGIISNMDRTTLDT-DNEKVKRVMIMVVFL----------------GVLLFTA 99
           +DI  NNAG+       +  T   + +  V ++ + +                G ++   
Sbjct: 90  VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININ 149

Query: 100 NLATETI--GEALYDYLMSKYAVLGLMKNLCVEL--GQYDIRVNSIAHIVSATPFFCNAM 155
           +++   +      + Y  +KYAV  L + L  EL   Q  IR   I+  V  T F     
Sbjct: 150 SMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLH 209

Query: 156 GIDKKTFKE 164
             D +    
Sbjct: 210 DKDPEKAAA 218

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

 Score = 69.2 bits (169), Expect = 3e-15
 Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 19/167 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   A+V++ADV D+   A  +E        Y   +VTI+ D + V  +   +FG +D 
Sbjct: 25  AVAAGARVVLADVLDEEGAATARELGDA--ARYQHLDVTIEEDWQRVVAYAREEFGSVDG 82

Query: 60  MFNNAGIIS---------NMDRTTLDTDNEKVKRVMIMVVFL------GVLLFTANLATE 104
           + NNAGI +            R  ++ +   V   M  V+        G ++  ++ A  
Sbjct: 83  LVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                   Y  SK+ V GL K   VELG   IRVNS+   ++ TP  
Sbjct: 143 MGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT 189

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 67.7 bits (165), Expect = 1e-14
 Identities = 33/181 (18%), Positives = 58/181 (32%), Gaps = 25/181 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTK---FGKL 57
           F    A +      +        ++      ++   C+ ++  + + +         GKL
Sbjct: 28  FAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKL 87

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT------------------A 99
           DI+ NN G I    + TLD   E     +           +                  +
Sbjct: 88  DILINNLGAIR--SKPTLDYTAEDFSFHI-STNLESAYHLSQLAHPLLKASGCGNIIFMS 144

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
           ++A          Y  +K A+  L +NL  E     IR N++A  V ATP        + 
Sbjct: 145 SIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEF 204

Query: 160 K 160
           K
Sbjct: 205 K 205

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 1e-14
 Identities = 32/197 (16%), Positives = 70/197 (35%), Gaps = 28/197 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL------ISYVCCNVTIDSDVKNVFDFT--K 53
            ++  + V+IA  + +  ++   E  ++        +  + CN+  + +V N+   T   
Sbjct: 32  LLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 91

Query: 54  FGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDY 113
           FGK++ + NN G       +  +  + K    ++     G       + +  + E     
Sbjct: 92  FGKINFLVNNGGG---QFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSI 148

Query: 114 LM-----------------SKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG 156
           +                  ++  V  L K+L +E     IR+N +A  V  +       G
Sbjct: 149 VNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYG 208

Query: 157 IDKKTFKELLYASANLK 173
              ++F E  +     K
Sbjct: 209 SWGQSFFEGSFQKIPAK 225

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Length = 242

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

 Score = 67.3 bits (164), Expect = 1e-14
 Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 20/165 (12%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A+++  D+++   R   +   +      V  +V   + V+  F       G+LD 
Sbjct: 25  FAKEGARLVACDIEEGPLREAAEAVGAH----PVVMDVADPASVERGFAEALAHLGRLDG 80

Query: 60  MFNNAGI-----ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEA----- 109
           + + AGI        M     +           +V                +  A     
Sbjct: 81  VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYL 140

Query: 110 ----LYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
                 +Y  S   V+GL + L +ELG++ IRVN++A     T  
Sbjct: 141 GNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRM 185

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.2 bits (161), Expect = 3e-14
 Identities = 33/183 (18%), Positives = 62/183 (33%), Gaps = 26/183 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
                A+V+          +L +E      I  VC ++      +        G +D++ 
Sbjct: 27  LHATGARVVAVSRTQADLDSLVRECPG---IEPVCVDLGDWEATERALG--SVGPVDLLV 81

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA------------------NLAT 103
           NNA +   + +  L+   E   R   + +   + +                     +  +
Sbjct: 82  NNAAV--ALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS 139

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFK 163
           +        Y  +K A+  L K + +ELG + IRVN++   V  T     A   D    K
Sbjct: 140 QRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMG-QATWSDPHKAK 198

Query: 164 ELL 166
            +L
Sbjct: 199 TML 201

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

 Score = 66.2 bits (161), Expect = 4e-14
 Identities = 40/187 (21%), Positives = 68/187 (36%), Gaps = 25/187 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELIS--YVCCNVTIDSDVKNVFDFT--KFGKL 57
             +    V++A    +      ++      +      C+V+   +VK + +    KFGKL
Sbjct: 25  LAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKL 84

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLAT-------------- 103
           D + N AGI  N      +   ++ ++V+ + +F    +     +               
Sbjct: 85  DTVVNAAGI--NRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGS 142

Query: 104 ----ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
               E     +  Y  SK  V  L K L  E G+Y IRVN IA     T     A+  D 
Sbjct: 143 LTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMT-EAVFSDP 201

Query: 160 KTFKELL 166
           +    +L
Sbjct: 202 EKLDYML 208

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

 Score = 65.9 bits (160), Expect = 4e-14
 Identities = 33/177 (18%), Positives = 61/177 (34%), Gaps = 16/177 (9%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F +  A ++  D ++ L        +++     V  +V+    V+ VF     +FG+L  
Sbjct: 25  FAREGASLVAVDREERLLAEAVAALEAE--AIAVVADVSDPKAVEAVFAEALEEFGRLHG 82

Query: 60  MFNNAGIISNMDRTTLDTDNEKV------------KRVMIMVVFLGVLLFTANLATETIG 107
           + + AG+  +     L  +  +              R    V+  G  L           
Sbjct: 83  VAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLGA 142

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
             L  Y   K  V+GL + L +EL +  +RVN +   +  TP          +    
Sbjct: 143 FGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVG 199

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

 Score = 65.8 bits (160), Expect = 5e-14
 Identities = 28/169 (16%), Positives = 58/169 (34%), Gaps = 19/169 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTK---FGKL 57
                A V               ++ S    +    C+++  S+ + + +       GKL
Sbjct: 28  LASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 87

Query: 58  DIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFLGVLLF--------------TANLA 102
           +I+ NNAGI+   +      ++   +  +     +   +L                ++++
Sbjct: 88  NILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVS 147

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                     Y  +K A+  L + L  E  + +IRVN +   V AT   
Sbjct: 148 GALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLV 196

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} Length = 252

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

 Score = 64.3 bits (156), Expect = 1e-13
 Identities = 21/168 (12%), Positives = 43/168 (25%), Gaps = 25/168 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
             +    V   D        L          +Y       + +   + +     +G++D+
Sbjct: 20  LSEAGHTVACHDESFKQKDEL-----EAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDV 74

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL-----------------A 102
           + +N                E  +  +  +      L  A                    
Sbjct: 75  LVSNDIFAPEFQ-PIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSAT 133

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
                + L  Y  ++     L   L  ELG+Y+I V +I      +  
Sbjct: 134 PFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSED 181

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 251

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

 Score = 63.9 bits (155), Expect = 2e-13
 Identities = 30/181 (16%), Positives = 58/181 (32%), Gaps = 18/181 (9%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTKFGKLDIM 60
             +  + VI        C ++  E  S     S    +V+   ++  V +       ++ 
Sbjct: 30  LAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 89

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL-----------------GVLLFTANLAT 103
                     D   L   N++ + V+   +                   G ++  +++  
Sbjct: 90  ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG 149

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFK 163
            T      +Y  SK  V+G  K+L  EL   +I VN+IA    ++          KK   
Sbjct: 150 LTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNII 209

Query: 164 E 164
            
Sbjct: 210 S 210

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.9 bits (155), Expect = 2e-13
 Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 21/175 (12%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
           F + ++K+++ D+          +       +     + +   D+ +       + G + 
Sbjct: 27  FAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 86

Query: 59  IMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL--------------GVLLFTANLAT 103
           I+ NNAG++   D         EK   V ++  F               G ++  A+ A 
Sbjct: 87  ILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG 146

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYD---IRVNSIAHIVSATPFFCNAM 155
                 L  Y  SK+A +G  K L  EL       ++   +      T F  N  
Sbjct: 147 HVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKNPS 201

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} Length = 294

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 2e-13
 Identities = 33/185 (17%), Positives = 64/185 (34%), Gaps = 20/185 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFD--FTKFGKL 57
                A+ +IA  + D+ +A  ++  S     +  + C+V     V+N         G  
Sbjct: 45  LSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHP 104

Query: 58  DIMFNNAGI----------------ISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL 101
           +I+ NNA                  I+++          ++ + +I        L    +
Sbjct: 105 NIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTI 164

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKT 161
             ET    +     +K  V  + K+L  E G+Y +R N I      T    + +      
Sbjct: 165 YAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTF 224

Query: 162 FKELL 166
            KE++
Sbjct: 225 EKEMI 229

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} Length = 276

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

 Score = 63.5 bits (154), Expect = 3e-13
 Identities = 36/175 (20%), Positives = 68/175 (38%), Gaps = 24/175 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           F+   AKV + D   +    L  +   +  +  +  +V    D K        +FGK+D 
Sbjct: 25  FVAEGAKVAVLDKSAERLAELETDHGDN--VLGIVGDVRSLEDQKQAASRCVARFGKIDT 82

Query: 60  MFNNAGI------ISNMDRTTLDTDNEKVKRVMIMVVFL-------------GVLLFTAN 100
           +  NAGI      + ++   +LD   ++V  + +                  G ++FT +
Sbjct: 83  LIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTIS 142

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
            A          Y  +K+A++GL++ L  EL  Y +RVN +      +     + 
Sbjct: 143 NAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVNGVGSGGINSDLRGPSS 196

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.5 bits (154), Expect = 4e-13
 Identities = 32/167 (19%), Positives = 63/167 (37%), Gaps = 17/167 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDFT--KFGK 56
            +   AKV + D   +               +   ++ C+V     +++ F      FG+
Sbjct: 23  LLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 82

Query: 57  LDIMFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFL---------GVLLFTANLATETI 106
           LDI+ NNAG+ +  +   TL  +   V     + +           G+++  ++LA    
Sbjct: 83  LDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMP 142

Query: 107 GEALYDYLMSKYAVLGLMKN--LCVELGQYDIRVNSIAHIVSATPFF 151
                 Y  SK+ ++G  ++  L   L    +R+N+I      T   
Sbjct: 143 VAQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAIL 189

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} Length = 254

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

 Score = 63.1 bits (153), Expect = 5e-13
 Identities = 26/165 (15%), Positives = 59/165 (35%), Gaps = 15/165 (9%)

Query: 2   FIQHRAKVIIADVQDDLCRALC--KEFDSDELISYVCCNVTID-SDVKNVFDFT--KFGK 56
            ++   K  +   + +   AL   K  +    I++   +VT+  ++ K +      +   
Sbjct: 25  LVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKT 84

Query: 57  LDIMFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFL---------GVLLFTANLATETI 106
           +DI+ N AGI+ +     T+  +   +      ++           G++    ++     
Sbjct: 85  VDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA 144

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
              +  Y  SK AV+    +L        +   SI   ++ TP  
Sbjct: 145 IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLV 189

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} Length = 257

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 62.4 bits (151), Expect = 7e-13
 Identities = 29/172 (16%), Positives = 58/172 (33%), Gaps = 24/172 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             +   +V +    ++  R   KE     +      C+V    +++ +      ++G +D
Sbjct: 22  LGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 81

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTA------------------- 99
           ++ NNAG        T +  +E    V+   +     +                      
Sbjct: 82  VLVNNAGR--PGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIA 139

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
           +   +        Y  SK+ V+G  K L +EL +  I VN++      TP  
Sbjct: 140 STGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMA 191

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 60.8 bits (147), Expect = 3e-12
 Identities = 44/169 (26%), Positives = 67/169 (39%), Gaps = 23/169 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
            +   AKV+  D+ D+  +A+  E    +   YV  +VT  +  K   D     FG L +
Sbjct: 26  MVAEGAKVVFGDILDEEGKAMAAEL--ADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV 83

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALY-------- 111
           + NNAGI      T  D    + +R++ + +    L   A +                  
Sbjct: 84  LVNNAGI--LNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIE 141

Query: 112 ---------DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                     Y  +K+AV GL K+  +ELG   IRVNSI   +  TP  
Sbjct: 142 GLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMT 190

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 272

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 60.9 bits (147), Expect = 3e-12
 Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 18/168 (10%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +   KVI+      +    +      +    + V  NV +  D+  +F+     FGKL
Sbjct: 38  LGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKL 97

Query: 58  DIMFNNAGIISNMD-RTTLDTDNEKVKRVMIMVVFL-------------GVLLFTANLAT 103
           DI+ +N+G++S    +     + ++V  +     F               ++L  +    
Sbjct: 98  DIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ 157

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                    Y  SK A+    + + +++    I VN +A     T  +
Sbjct: 158 AKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMY 205

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

 Score = 59.7 bits (144), Expect = 7e-12
 Identities = 33/183 (18%), Positives = 71/183 (38%), Gaps = 19/183 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTK---FGKL 57
                A+V      +       + +    L +    C++   ++   +         GKL
Sbjct: 26  LAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKL 85

Query: 58  DIMFNNAGIISNMDRTTLDTD---------------NEKVKRVMIMVVFLGVLLFTANLA 102
           +I+ NNAG++ + +                        ++   ++     G ++F +++A
Sbjct: 86  NILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIA 145

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTF 162
             +   ++  Y  SK A+  + K+L  E  + +IRVNS+A  V  TP    A+  +    
Sbjct: 146 GFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQK 205

Query: 163 KEL 165
           +E+
Sbjct: 206 EEI 208

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

 Score = 59.8 bits (144), Expect = 9e-12
 Identities = 43/176 (24%), Positives = 72/176 (40%), Gaps = 21/176 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDFT--KFGK 56
                AK+ + DV  +   A          D  +     +V+ ++ V+     T  +FG+
Sbjct: 24  LAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR 83

Query: 57  LDIMFNNAGIISNMDRTTLDTDNE----------------KVKRVMIMVVFLGVLLFTAN 100
           +D  FNNAGI    + T   T  E                +    ++     G+++ TA+
Sbjct: 84  IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTAS 143

Query: 101 LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG 156
           +           Y  +K+ V+GL +N  VE G+Y IR+N+IA     TP   N+M 
Sbjct: 144 VGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMK 199

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.9 bits (142), Expect = 1e-11
 Identities = 35/172 (20%), Positives = 63/172 (36%), Gaps = 26/172 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
           F +  AKVI  D+ +   + L K              + +    +      +  +LD++F
Sbjct: 26  FAREGAKVIATDINESKLQELEKY------PGIQTRVLDVTKKKQIDQFANEVERLDVLF 79

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATE 104
           N AG +     T LD + +     M + V                   G ++  +++A+ 
Sbjct: 80  NVAGFV--HHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASS 137

Query: 105 TIGEALY-DYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
             G      Y  +K AV+GL K++  +  Q  IR N +      TP     +
Sbjct: 138 VKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERI 189

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} Length = 255

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

 Score = 59.1 bits (142), Expect = 2e-11
 Identities = 32/169 (18%), Positives = 55/169 (32%), Gaps = 19/169 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
            ++    V IAD  D   +A+  E +        V  +V+    V    +      G  D
Sbjct: 21  LVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 80

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVK----------------RVMIMVVFLGVLLFTANLA 102
           ++ NNAG+  +    ++  +                              G ++   + A
Sbjct: 81  VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQA 140

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                  L  Y  SK+AV GL +    +L    I VN     +  TP +
Sbjct: 141 GHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMW 189

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

 Score = 58.9 bits (142), Expect = 2e-11
 Identities = 27/177 (15%), Positives = 50/177 (28%), Gaps = 31/177 (17%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
                A V +          + ++   +         C+V+    V           G +
Sbjct: 29  VAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPI 88

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVM-------------------------IMVVFL 92
             +  NAG+  ++ +   +  +E    V                           +VV  
Sbjct: 89  SGLIANAGV--SVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTS 146

Query: 93  GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP 149
            +     N ++         Y  SK A   L+K L  E     IRVN+++     T 
Sbjct: 147 SMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTD 203

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

 Score = 57.4 bits (138), Expect = 5e-11
 Identities = 33/170 (19%), Positives = 60/170 (35%), Gaps = 22/170 (12%)

Query: 2   FIQHRAKVII-ADVQDDLCRALCKEFDS-DELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +  A V++           +  E          +  +++  S+V  +FD     FG L
Sbjct: 26  LGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL 85

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL---------------GVLLFTANLA 102
           D + +N+G+   +    L+   E   +V  +                   G ++ T+++A
Sbjct: 86  DFVMSNSGM--EVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIA 143

Query: 103 TETIGEALYDYL-MSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
               G   +     SK AV G  +   V+ G   + VN IA     T  F
Sbjct: 144 AVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMF 193

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} Length = 261

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

 Score = 57.4 bits (138), Expect = 6e-11
 Identities = 37/181 (20%), Positives = 71/181 (39%), Gaps = 24/181 (13%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKL 57
           F   +AKV++    ++D   ++ +E          V  +VT++SDV N+      +FGKL
Sbjct: 27  FATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86

Query: 58  DIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------------LGVLLFTA 99
           D+M NNAG+      ++ +       +V+   +                    G ++  +
Sbjct: 87  DVMINNAGL--ENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMS 144

Query: 100 NLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDK 159
           ++  +        Y  SK  +  + + L +E     IRVN+I      TP         +
Sbjct: 145 SVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPE 204

Query: 160 K 160
           +
Sbjct: 205 Q 205

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

 Score = 56.7 bits (136), Expect = 1e-10
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 19/173 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFT--KFGKLD 58
             +    + + D+  +             +      C+VT +  V    D     FGK+D
Sbjct: 25  LAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKID 84

Query: 59  IMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFL----------------GVLLFTANLA 102
            +FNNAG             ++  + + I V                   G ++ TA++A
Sbjct: 85  FLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMA 144

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
                  +  Y  SK A++ L +   ++L  Y+IRVN+I+       F     
Sbjct: 145 GVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQ 197

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} Length = 240

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

 Score = 55.9 bits (134), Expect = 1e-10
 Identities = 25/163 (15%), Positives = 61/163 (37%), Gaps = 18/163 (11%)

Query: 7   AKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKLDIMFNN 63
             ++++         +  E  ++  L   +  +++  +DV+ +      ++G +D + NN
Sbjct: 33  PVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNN 92

Query: 64  AGIISNMDRTTLDT-DNEKVKRVMIMVVFL--------------GVLLFTANLATETIGE 108
           AG+      + L   D +      +   F               G + F  ++A      
Sbjct: 93  AGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFR 152

Query: 109 ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
               Y MSK+   GL++ + +   + ++R+  +      TP +
Sbjct: 153 HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMW 195

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} Length = 234

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 55.8 bits (134), Expect = 2e-10
 Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 27/170 (15%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
             Q  A+V I    ++L +     +        V C++    D+  +F+  K  ++DI+ 
Sbjct: 24  LSQEGAEVTICARNEELLKRSGHRY--------VVCDLR--KDLDLLFE--KVKEVDILV 71

Query: 62  NNA-----GIISNMDRTTLDT----------DNEKVKRVMIMVVFLGVLLFTANLATETI 106
            NA     G    +                    +     +     G ++   + +  + 
Sbjct: 72  LNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISP 131

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG 156
            E LY    ++ A+ G +K L  E+  Y I VN +A   + T      + 
Sbjct: 132 IENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLS 181

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.9 bits (134), Expect = 2e-10
 Identities = 21/174 (12%), Positives = 56/174 (32%), Gaps = 20/174 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEF--DSDELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +  A V++     +  + +             Y+   +   +  +          G L
Sbjct: 34  LAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGL 93

Query: 58  DIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL-------------GVLLFTANLAT 103
           D++  N    ++++    D  +  K   V  +   +             G ++  ++LA 
Sbjct: 94  DMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG 153

Query: 104 ETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVNSIAHIVSATPFFCNAM 155
           +     +  Y  SK+A+ G   ++  E    + ++ +      +  T     A+
Sbjct: 154 KVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV 207

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} Length = 260

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

 Score = 52.5 bits (125), Expect = 3e-09
 Identities = 24/175 (13%), Positives = 50/175 (28%), Gaps = 20/175 (11%)

Query: 2   FIQHRAKVIIADVQD-DLCRALCKEFDSDEL--ISYVCCNVTIDSDVKNVFDFT--KFGK 56
                A +++    D      +     +     + Y   +++    V+ + D    + G+
Sbjct: 24  LAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83

Query: 57  LDIMFNN--------AGIISNMDRTTLDTDNEKVKRVMIMVVFL-------GVLLFTANL 101
           +DI+ NN                   +   N                    G ++  A+ 
Sbjct: 84  IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA 143

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMG 156
                      Y+ +K+ V+G  K   +E     I  N+I      TP     + 
Sbjct: 144 HGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQIS 198

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} Length = 266

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

 Score = 51.0 bits (121), Expect = 9e-09
 Identities = 31/207 (14%), Positives = 65/207 (31%), Gaps = 49/207 (23%)

Query: 2   FIQHRAKVIIADV-QDDLCRALCKEFDSDE------LISYVCCNVTIDSDVKNVFDFT-- 52
             Q   +V++     +   + L  E ++            +  + ++    +++ D +  
Sbjct: 21  LHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 80

Query: 53  KFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYD 112
            FG+ D++ NNA          L  D+         +      LF +N          + 
Sbjct: 81  AFGRCDVLVNNASA--YYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFA 138

Query: 113 YLM---------------------------------SKYAVLGLMKNLCVELGQYDIRVN 139
                                               +K+A+ GL +   +EL    IRVN
Sbjct: 139 RRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVN 198

Query: 140 SIAHIVSATPFFCNAMGIDKKTFKELL 166
           ++A  +S  P       + ++T +E  
Sbjct: 199 AVAPGLSLLP-----PAMPQETQEEYR 220

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 236

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 50.6 bits (120), Expect = 1e-08
 Identities = 24/171 (14%), Positives = 48/171 (28%), Gaps = 23/171 (13%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVT-IDSDVKNVFDFTKFGKLDIM 60
           F      V   DV ++      +E  +  ++          D     V       K+D +
Sbjct: 22  FRARNWWVASIDVVEN------EEASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 75

Query: 61  FNNAGIISNMDRTTLDTDN--EKVKRVMIMVVFLGVLLF------------TANLATETI 106
              AG  +  +  +       + + +  I    +   L                 A    
Sbjct: 76  LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG 135

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYD--IRVNSIAHIVSATPFFCNAM 155
              +  Y M+K AV  L ++L  +           ++  +   TP    +M
Sbjct: 136 TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM 186

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} Length = 243

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

 Score = 50.5 bits (120), Expect = 1e-08
 Identities = 33/180 (18%), Positives = 65/180 (36%), Gaps = 19/180 (10%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
                AKVI     ++  +A+     ++     +  NVT  + +++V +    +FG++DI
Sbjct: 24  LAARGAKVIGTATSENGAQAISDYLGAN--GKGLMLNVTDPASIESVLEKIRAEFGEVDI 81

Query: 60  MFNNAGIISNMDR-TTLDTDNEKVKRVMIMVVFL--------------GVLLFTANLATE 104
           + NNAGI  +       D +   +    +  VF               G ++   ++   
Sbjct: 82  LVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGT 141

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
                  +Y  +K  ++G  K+L  E+    I VN +A     T          +     
Sbjct: 142 MGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILA 201

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} Length = 244

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

 Score = 50.1 bits (119), Expect = 2e-08
 Identities = 30/182 (16%), Positives = 65/182 (35%), Gaps = 19/182 (10%)

Query: 2   FIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFT--KFGKL 57
             +   KV++   +       + K+ ++          +V+ ++DV+ +       +G +
Sbjct: 21  LGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80

Query: 58  DIMFNNAGIISNMDRTTLDTDN-EKVKRVMIMVVFL--------------GVLLFTANLA 102
           D++ NNAGI  +     +     ++V  + +  VFL              G ++  A++ 
Sbjct: 81  DVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVV 140

Query: 103 TETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTF 162
                    +Y  +K  V+G  K    E    +I VN +     A+          +K  
Sbjct: 141 GLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKI 200

Query: 163 KE 164
             
Sbjct: 201 LG 202

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} Length = 256

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 24/170 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
           +++  A+V IAD+  +  RA   E         +  +VT  + +         ++G +DI
Sbjct: 25  YVREGARVAIADINLEAARATAAEIGPA--ACAIALDVTDQASIDRCVAELLDRWGSIDI 82

Query: 60  MFNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTAN------------------L 101
           + NN           ++   E   R+  + V   + +  A                    
Sbjct: 83  LVNN--AALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQ 140

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
           A       +  Y  +K AV+ L ++  + L ++ I VN+IA  V     +
Sbjct: 141 AGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHW 190

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 241

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score = 49.8 bits (118), Expect = 2e-08
 Identities = 30/178 (16%), Positives = 59/178 (33%), Gaps = 15/178 (8%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFD--SDELISYVCCNVTIDSDVKNVFDFTKFGKLDI 59
                 +V++ D++ +    +  E D   +E +         ++ +  V      G  + 
Sbjct: 21  LKARGYRVVVLDLRREGEDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEK 80

Query: 60  MFNNAGIISN-MDRTTLDTDNEKVKRVMIMVVFL------------GVLLFTANLATETI 106
           +    G       R  L+ +      V+ +  +             GV++ TA++A    
Sbjct: 81  ILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEG 140

Query: 107 GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKE 164
                 Y  SK  V+ L      EL  + IRV ++A  +  TP         K +   
Sbjct: 141 QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAA 198

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} Length = 235

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

 Score = 49.5 bits (117), Expect = 3e-08
 Identities = 25/170 (14%), Positives = 50/170 (29%), Gaps = 21/170 (12%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
           F ++   V+  D+  +         D +             S ++      +  ++D +F
Sbjct: 22  FKKNGYTVLNIDLSANDQADSNILVDGN-----KNWTEQEQSILEQTASSLQGSQVDGVF 76

Query: 62  NNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVL--------------LFTANLATETIG 107
             AG  +    ++ D        +   V    +                 T   A     
Sbjct: 77  CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT 136

Query: 108 EALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNSIAHIVSATPFFCNAM 155
            ++  Y M+K AV  L  +L  +      +  V +I  +   TP     M
Sbjct: 137 PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM 186

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 47.6 bits (112), Expect = 1e-07
 Identities = 30/194 (15%), Positives = 54/194 (27%), Gaps = 44/194 (22%)

Query: 5   HRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTK--FGK--LDIM 60
           +   +I      +    L    DS   +  +   VT D  +           G   L ++
Sbjct: 28  NIRHIIATARDVEKATELKSIKDSR--VHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLL 85

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT---------------------- 98
            NNAG++  +   T    N  V    + V    V+L T                      
Sbjct: 86  INNAGVL--LSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVS 143

Query: 99  --------------ANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHI 144
                          +  + +    +  Y MSK A+    + L V+L   ++ V +    
Sbjct: 144 RAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPG 203

Query: 145 VSATPFFCNAMGID 158
              T        + 
Sbjct: 204 WVQTNLGGKNAALT 217

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 237

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 46.6 bits (110), Expect = 2e-07
 Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 27/166 (16%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFT--KFGKLDI 59
                 KV +        + L            V  +VT    V   F       G +++
Sbjct: 27  LAADGHKVAVTHRGSGAPKGL----------FGVEVDVTDSDAVDRAFTAVEEHQGPVEV 76

Query: 60  MFNNA-----GIISNMDRTTLDTDNE----------KVKRVMIMVVFLGVLLFTANLATE 104
           + +NA       +  M     +              +     +     G ++F  +++  
Sbjct: 77  LVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL 136

Query: 105 TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF 150
                  +Y  SK  V+G+ +++  EL + ++  N +A     T  
Sbjct: 137 WGIGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDM 182

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 275

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (107), Expect = 8e-07
 Identities = 17/98 (17%), Positives = 36/98 (36%), Gaps = 6/98 (6%)

Query: 4   QHRAKVIIADVQDDLCRALCKEFDSDEL-ISYVCCNVTIDSDVKNVFDFTK--FGKLDIM 60
                V++        +A  ++  ++ L   +   ++     ++ + DF +  +G LD++
Sbjct: 26  LFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVL 85

Query: 61  FNNAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFT 98
            NNAGI     +    T       V +   F G     
Sbjct: 86  VNNAGI---AFKVADPTPFHIQAEVTMKTNFFGTRDVC 120

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} Length = 259

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 45.2 bits (106), Expect = 9e-07
 Identities = 24/204 (11%), Positives = 59/204 (28%), Gaps = 31/204 (15%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDEL---ISYVCCNVTIDSDVKNVFDFTK------FGKL 57
           + ++++   + + R L +E  + +    +     ++  ++ V+ +    +        + 
Sbjct: 34  SVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQR 93

Query: 58  DIMFNNAGIISNMDRTTL-DTDNEKVKRVM-------------------IMVVFLGVLLF 97
            ++ NNA  + ++ +  L   D  +V                               ++ 
Sbjct: 94  LLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVN 153

Query: 98  TANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGI 157
            ++L      +    Y   K A   L + L  E     +RV S A           A   
Sbjct: 154 ISSLCALQPYKGWGLYCAGKAARDMLYQVLAAEE--PSVRVLSYAPGPLDNDMQQLARET 211

Query: 158 DKKTFKELLYASANLKGVVLKAAD 181
            K              G ++    
Sbjct: 212 SKDPELRSKLQKLKSDGALVDCGT 235

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.9 bits (100), Expect = 7e-06
 Identities = 16/68 (23%), Positives = 30/68 (44%)

Query: 93  GVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFC 152
           G +L T ++           Y  SK+A+ GL ++L V L  + + ++ I      T F  
Sbjct: 135 GRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFME 194

Query: 153 NAMGIDKK 160
             +G  ++
Sbjct: 195 KVLGSPEE 202

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 41.2 bits (95), Expect = 2e-05
 Identities = 25/187 (13%), Positives = 53/187 (28%), Gaps = 36/187 (19%)

Query: 7   AKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF----TKFGKLDIMFN 62
             +       +  + L     +   I  +  ++        +       TK   L+++FN
Sbjct: 30  QHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFN 89

Query: 63  NAGIISNMDRTTLDTDNEKVKRVMIMVVFLGVLLFTANL--------------------- 101
           N   I+          ++++   +     + ++L  A L                     
Sbjct: 90  N-AGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAA 148

Query: 102 ----------ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF 151
                             +Y Y  SK A+    K+L V+L    I   S+      T   
Sbjct: 149 IINMSSILGSIQGNTDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG 208

Query: 152 CNAMGID 158
            ++  +D
Sbjct: 209 GSSAPLD 215

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} Length = 258

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 22/174 (12%), Positives = 54/174 (31%), Gaps = 20/174 (11%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFD--FTKFGKLDI 59
             +  A++      D L   + +          + C+V  D+ +  +F      + K D 
Sbjct: 27  MHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDG 86

Query: 60  MFNNAGI--ISNMDRTTLDTDNEKVKRVMIMVVFLGV----------------LLFTANL 101
             ++ G      +D   ++    +  ++   +                     LL  + L
Sbjct: 87  FVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYL 146

Query: 102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAM 155
             E          ++K ++   ++ +   +G   +RVN+I+     T       
Sbjct: 147 GAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIK 200

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} Length = 248

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (85), Expect = 6e-04
 Identities = 37/207 (17%), Positives = 69/207 (33%), Gaps = 31/207 (14%)

Query: 2   FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMF 61
            +   A  ++ D+ +    A  K+  ++ + +        D          KFG++D+  
Sbjct: 25  LVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAV 84

Query: 62  NNAGIISNMDRTTLDTDN-------EKVKRVMIMVVFL--------------------GV 94
           N AGI        L           ++V  V +M  F                     GV
Sbjct: 85  NCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGV 144

Query: 95  LLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNA 154
           ++ TA++A          Y  SK  ++G+   +  +L    IRV +IA  +  TP   + 
Sbjct: 145 IINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL 204

Query: 155 MGIDKKTFKELLYASANLKGVVLKAAD 181
                +     L +       +   A+
Sbjct: 205 P----EKVCNFLASQVPFPSRLGDPAE 227

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	181
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	100.0
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	100.0
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	100.0
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	100.0
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	100.0
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	100.0
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	100.0
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	100.0
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	100.0
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	100.0
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	100.0
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	100.0
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	100.0
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	100.0
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	100.0
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	100.0
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	100.0
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	100.0
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	100.0
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	100.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	100.0
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	100.0
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	100.0
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	100.0
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	100.0
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	100.0
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	100.0
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	100.0
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	100.0
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	100.0
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	100.0
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	100.0
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	100.0
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	100.0
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	100.0
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	100.0
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	100.0
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	100.0
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	100.0
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	100.0
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	100.0
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	100.0
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	100.0
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	100.0
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	100.0
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	99.98
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	99.97
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	99.97
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	99.97
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	99.97
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	99.97
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	99.96
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	99.96
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	99.96
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	99.95
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	99.95
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	99.95
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	99.95
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	99.94
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	99.94
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	99.94
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	99.93
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	99.93
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	99.89
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	99.88
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	99.34
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	99.25
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.2
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	99.15
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	99.07
d1kewa_	361	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	99.06
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	98.98
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	98.98
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	98.94
d1gy8a_	383	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.84
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	98.81
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	98.81
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	98.81
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	98.81
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	98.78
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	98.75
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	98.72
d1oc2a_	346	dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus	98.71
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	98.71
d1e6ua_	315	GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (	98.67
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	98.67
d1r6da_	322	dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces	98.56
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	97.87
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	97.83
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	97.81
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	97.74
d1n2sa_	298	dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S	97.71
d1eq2a_	307	ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric	97.57
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	97.23
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	97.12
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	96.63
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	96.6
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	93.86
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	92.98
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	92.74
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	91.4
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	90.6
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	88.36
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	88.08
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	86.78
d1wg8a2	182	TM0872, methyltransferase domain {Thermus thermoph	86.06
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	85.59
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	84.82
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	84.55
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	84.16
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	83.85
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	83.69
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	83.64
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	83.36
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	82.87
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	82.23
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	81.93
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	80.52
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	80.38
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	80.35

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=5.9e-40  Score=241.52  Aligned_cols=174  Identities=21%  Similarity=0.252  Sum_probs=156.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+++.++++.+++... .++.++.+|+++++++++++++  .++|++|++|||||....  ..+.+.
T Consensus        29 ~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnag~~~~--~~~~~~  106 (251)
T d2c07a1          29 MLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVDILVNNAGITRD--NLFLRM  106 (251)
T ss_dssp             HHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEECCCCCCC--CCTTTC
T ss_pred             HHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCceeeeeccccccc--cccccc
Confidence            37899999999999999999998888665 6899999999999999999999  888999999999999877  888899


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++++++|+.                 .|+||++||.++..+.++...|++||+|+.+|+|+|+.|++++|||||+
T Consensus       107 ~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~  186 (251)
T d2c07a1         107 KNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGNVGQANYSSSKAGVIGFTKSLAKELASRNITVNA  186 (251)
T ss_dssp             CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEE
Confidence            99999999999999                 6999999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|+|....   .++..+.+....  |++|+++|+|
T Consensus       187 V~PG~v~T~~~~~~---~~~~~~~~~~~~--pl~R~~~ped  222 (251)
T d2c07a1         187 IAPGFISSDMTDKI---SEQIKKNIISNI--PAGRMGTPEE  222 (251)
T ss_dssp             EEECSBCC-----C---CHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EccCCEeccccccc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999998765   456667777776  9999999986

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=6e-40  Score=242.39  Aligned_cols=177  Identities=19%  Similarity=0.224  Sum_probs=159.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+++.++++.+++... .++.++.+|++|++++++++++  .+||+||+||||||....  .++.++
T Consensus        21 ~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~   98 (257)
T d2rhca1          21 RLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDVLVNNAGRPGG--GATAEL   98 (257)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCC--SCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCEEEecccccCC--CChHHc
Confidence            37899999999999999999988887654 5899999999999999999999  889999999999999877  889999


Q ss_pred             CHHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           78 DNEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.++|++++++|+.                   .|+||+++|..+..+.+.+..|+++|+|+.+|+|+|+.|++++||||
T Consensus        99 ~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrV  178 (257)
T d2rhca1          99 ADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGVVHAAPYSASKHGVVGFTKALGLELARTGITV  178 (257)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred             CHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCcccccccccccccccccchhHHHHHHHHHHHHHHHHHHhhhhCcEE
Confidence            99999999999999                   57999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcC--------CChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMG--------IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+|+|+|+....+        ..++..+.+.+.+  |++|+++|+|
T Consensus       179 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~--PlgR~~~ped  227 (257)
T d2rhca1         179 NAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARV--PIGRYVQPSE  227 (257)
T ss_dssp             EEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             EEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999999866532        1345566666666  9999999986

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=6.4e-40  Score=240.21  Aligned_cols=172  Identities=20%  Similarity=0.236  Sum_probs=158.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+++.++++.+++..  ++..+.+|+++++++++++++  .++|++|++|||||....  .++.+.+
T Consensus        23 ~l~~~G~~Vv~~~r~~~~l~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~--~~~~~~~   98 (243)
T d1q7ba_          23 TLAARGAKVIGTATSENGAQAISDYLGA--NGKGLMLNVTDPASIESVLEKIRAEFGEVDILVNNAGITRD--NLLMRMK   98 (243)
T ss_dssp             HHHHTTCEEEEEESSHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHcCCEEEEEeCCHHHHHHHHHHhCC--CCcEEEEEecCHHHhhhhhhhhhcccCCcceehhhhhhccc--ccccccc
Confidence            3789999999999999999999888876  788999999999999999999  888999999999999877  8899999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++.+++|+.                 .|+||++||.++..+.++..+|+++|+|+.+|+|+++.|++++|||||+|
T Consensus        99 ~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I  178 (243)
T d1q7ba_          99 DEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVV  178 (243)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             ccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCCCCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEE
Confidence            9999999999999                 68999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++++..   .++..+.+.+..  |++|+++|||
T Consensus       179 ~PG~i~T~~~~~~---~~~~~~~~~~~~--pl~R~~~ped  213 (243)
T d1q7ba_         179 APGFIETDMTRAL---SDDQRAGILAQV--PAGRLGGAQE  213 (243)
T ss_dssp             EECSBCCHHHHTS---CHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             ecceEechhhhhh---hhhHHHHHHhcC--CCCCCCCHHH
Confidence            9999999998776   345566666666  9999999986

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=1.3e-39  Score=239.52  Aligned_cols=176  Identities=23%  Similarity=0.272  Sum_probs=158.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+++++..+++...  .++.++.+|+++++++++++++  .++|+||+||||||....  .++.+
T Consensus        24 ~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~--~~~~~  101 (251)
T d1vl8a_          24 GLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLDTVVNAAGINRR--HPAEE  101 (251)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChhh
Confidence            37899999999999999888877766432  4789999999999999999999  788999999999998776  89999


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|++.+++|+.                 .|+||+++|..+. .+.+.+..|+++|+|+.+|+|+|+.|++++||||
T Consensus       102 ~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrV  181 (251)
T d1vl8a_         102 FPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTMPNISAYAASKGGVASLTKALAKEWGRYGIRV  181 (251)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCSSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             CCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccCccccchHHHHHhHHHHHHHHHHHhcccCeEE
Confidence            999999999999999                 6899999997664 5778889999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|+|.+.... +++..+.+.+..  |++|+++|||
T Consensus       182 N~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~--pl~R~~~ped  221 (251)
T d1vl8a_         182 NVIAPGWYRTKMTEAVFS-DPEKLDYMLKRI--PLGRTGVPED  221 (251)
T ss_dssp             EEEEECCBCSTTTHHHHT-CHHHHHHHHHTC--TTSSCBCGGG
T ss_pred             EEEeeCcccCHHHHhccC-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999999887765 677888888887  9999999987

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.6e-39  Score=239.64  Aligned_cols=174  Identities=26%  Similarity=0.359  Sum_probs=157.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.++++++.+++... .++.++.||+++++++++++++  .++|++|++|||||....  .++ +.
T Consensus        30 ~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~--~~~-e~  106 (255)
T d1fmca_          30 TFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDILVNNAGGGGP--KPF-DM  106 (255)
T ss_dssp             HHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCT-TC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEeeeCCcCCCC--Ccc-cC
Confidence            37899999999999999999998887654 5899999999999999999999  788999999999998765  555 78


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++++++|+.                 .|+||++||.++..+.+++..|+++|+|+.+|+|+|+.|++++|||||+
T Consensus       107 ~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~  186 (255)
T d1fmca_         107 PMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKNINMTSYASSKAAASHLVRNMAFDLGEKNIRVNG  186 (255)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred             CHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccccccccchhHHHHHHHHHHHHHHHhCccCeEEEE
Confidence            99999999999999                 6789999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+|+|++.....  .++..+.+.+..  |++|+++|+|
T Consensus       187 I~PG~i~T~~~~~~~--~~e~~~~~~~~~--pl~R~g~ped  223 (255)
T d1fmca_         187 IAPGAILTDALKSVI--TPEIEQKMLQHT--PIRRLGQPQD  223 (255)
T ss_dssp             EEECSBCSHHHHTTC--CHHHHHHHHHTC--SSCSCBCHHH
T ss_pred             eeeCcCcChHhhccC--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999887654  567777777777  9999999986

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=100.00  E-value=1e-39  Score=240.84  Aligned_cols=177  Identities=22%  Similarity=0.234  Sum_probs=158.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|++++++++.+++... .++.++.||+++++++++++++  .+||++|+||||||....  .++.++
T Consensus        20 ~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~   97 (255)
T d1gega_          20 RLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVIVNNAGVAPS--TPIESI   97 (255)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEEEECCCCCCC--BCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeccccccc--CcHHHh
Confidence            37899999999999999999988887654 5899999999999999999999  889999999999999876  899999


Q ss_pred             CHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           78 DNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        78 ~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.++|++.+++|+.                  .+.|+++||.++..+.+.+..|+++|+|+.+|+|+|+.|++++|||||
T Consensus        98 ~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN  177 (255)
T d1gega_          98 TPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGNPELAVYSSSKFAVRGLTQTAARDLAPLGITVN  177 (255)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             hhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccCcccccchhCHHHHHhhHHHHHHHhhhhCcEEE
Confidence            99999999999999                  578999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCC--------ChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI--------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|+++....+.        ..+..+++.+..  |++|+++|+|
T Consensus       178 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--pl~R~~~pee  225 (255)
T d1gega_         178 GYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRI--TLGRLSEPED  225 (255)
T ss_dssp             EEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcC--CCCCCcCHHH
Confidence            999999999987665322        234455556666  9999999986

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=100.00  E-value=2.7e-39  Score=238.63  Aligned_cols=175  Identities=22%  Similarity=0.245  Sum_probs=158.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.||+++++++++++++  .++|+||++|||||....  .++.+++
T Consensus        24 ~la~~Ga~V~~~~r~~~~l~~~~~~~~~--~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~--~~~~~~~   99 (256)
T d1k2wa_          24 AYVREGARVAIADINLEAARATAAEIGP--AACAIALDVTDQASIDRCVAELLDRWGSIDILVNNAALFDL--APIVEIT   99 (256)
T ss_dssp             HHHHTTEEEEEEESCHHHHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhCC--ceEEEEeeCCCHHHHHHHHHHHHHHhCCccEEEeecccccc--cccccCC
Confidence            3789999999999999999999999976  799999999999999999999  788999999999999877  8899999


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|++.+++|+.                  .|+||++||.++..+.+.+..|+++|+|+.+|+|+|+.|++++|||||+
T Consensus       100 ~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~  179 (256)
T d1k2wa_         100 RESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGEALVGVYCATKAAVISLTQSAGLNLIRHGINVNA  179 (256)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhccccccccchhhhhhHHHHHHHHHHHHhcccCeEEEE
Confidence            9999999999998                  5899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcC--------CChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMG--------IDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++++....        ..++..+.+.+.+  |++|+++|+|
T Consensus       180 V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--PlgR~~~p~e  226 (256)
T d1k2wa_         180 IAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAV--PFGRMGRAED  226 (256)
T ss_dssp             EEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHS--TTSSCBCHHH
T ss_pred             EecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998765432        1345566667777  9999999986

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=100.00  E-value=1.4e-39  Score=240.26  Aligned_cols=178  Identities=25%  Similarity=0.291  Sum_probs=154.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC---CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS---DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++..+++..   ..++..+.||++|++++++++++  .++|++|+||||||+.... .++.
T Consensus        23 ~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~-~~~~  101 (258)
T d1iy8a_          23 RLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRIDGFFNNAGIEGKQ-NPTE  101 (258)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCC-BCGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCCCCEEEECCcccccC-Cchh
Confidence            3789999999999999998887766532   25789999999999999999999  8889999999999976542 6788


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +++.++|++++++|+.                 .|+||++||.++..+.+....|+++|+++.+|+|+|+.|++++||||
T Consensus       102 ~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrV  181 (258)
T d1iy8a_         102 SFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGIGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRI  181 (258)
T ss_dssp             GSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBCSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             hhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCCCCchHHHHHHHHHHHHHHHHHHHhCccCceE
Confidence            8999999999999999                 78999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCC-----ChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGI-----DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+++|+|.......     ..+..+.+....  |++|+++|+|
T Consensus       182 N~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~--pl~R~~~p~d  227 (258)
T d1iy8a_         182 NAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVN--PSKRYGEAPE  227 (258)
T ss_dssp             EEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             EEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999987665321     233444555555  9999999986

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=100.00  E-value=2e-39  Score=237.72  Aligned_cols=174  Identities=17%  Similarity=0.196  Sum_probs=155.1

Q ss_pred             CcccCCCEEEEee-cchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIAD-VQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~-r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++.+ |+++.++++.++++.. .++.++++|++|.+++++++++  .++|++|++|||||....  .++.+
T Consensus        20 ~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAg~~~~--~~~~~   97 (244)
T d1edoa_          20 SLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDVVVNNAGITRD--TLLIR   97 (244)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCccccccccccc--cchhc
Confidence            3789999999875 5667777776666432 5889999999999999999999  888999999999999877  89999


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|++++++|+.                 .|+||++||.++..+.++...|+++|+|+.+|+|+|+.|++++|||||
T Consensus        98 ~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN  177 (244)
T d1edoa_          98 MKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGNIGQANYAAAKAGVIGFSKTAAREGASRNINVN  177 (244)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEE
T ss_pred             cchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCCCCCHHHHHHHHHHHHChHHHHHHHhhhCcEEE
Confidence            999999999999999                 799999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|+|...+   .++..+.+.+..  |++|+++|+|
T Consensus       178 ~I~PG~i~T~~~~~~---~~~~~~~~~~~~--pl~R~~~p~d  214 (244)
T d1edoa_         178 VVCPGFIASDMTAKL---GEDMEKKILGTI--PLGRTGQPEN  214 (244)
T ss_dssp             EEEECSBCSHHHHTT---CHHHHHHHHTSC--TTCSCBCHHH
T ss_pred             EEecceeccHHHHHh---hHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999998765   446666666666  9999999986

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=100.00  E-value=4.2e-39  Score=237.94  Aligned_cols=177  Identities=19%  Similarity=0.207  Sum_probs=158.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccC-CccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFG-KLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~-~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|++++++++.+++... .++.++.||+++++++++++++  .+++ ++|++|||||....  .++.+
T Consensus        27 ~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~idilvnnAG~~~~--~~~~~  104 (259)
T d2ae2a_          27 ELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIY--KEAKD  104 (259)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCCceEEEECCceecc--Ccccc
Confidence            37899999999999999999998888654 6788999999999999999998  6676 79999999999877  88999


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|++++++|+.                 .|+||++||..+..+.+....|+++|+++.+|+|+|+.|++++|||||
T Consensus       105 ~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN  184 (259)
T d2ae2a_         105 YTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVN  184 (259)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEE
T ss_pred             CCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccccccccchHHHHHHHHHHHHHHHHHhCcCceEEE
Confidence            999999999999998                 789999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCC--ChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI--DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+|+|++.+.....  .++..+++....  |++|+++|||
T Consensus       185 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--pl~R~g~ped  226 (259)
T d2ae2a_         185 GVGPGVIATSLVEMTIQDPEQKENLNKLIDRC--ALRRMGEPKE  226 (259)
T ss_dssp             EEEECSBCSHHHHHHTTSHHHHHHHHHHHHTS--TTCSCBCHHH
T ss_pred             EeeeCcccCHHHHhhhhchhhHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999998776542  234455556666  9999999986

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-39  Score=236.32  Aligned_cols=175  Identities=25%  Similarity=0.371  Sum_probs=155.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+++.++++.+++.   .+.++.||++|++++++++++  .+++++|++|||||..... .++.+.+
T Consensus        25 ~la~~Ga~V~i~~r~~~~~~~~~~~~~---~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~-~~~~~~~  100 (250)
T d1ydea1          25 AFVNSGARVVICDKDESGGRALEQELP---GAVFILCDVTQEDDVKTLVSETIRRFGRLDCVVNNAGHHPPP-QRPEETS  100 (250)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHCT---TEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-CCGGGCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHhcC---CCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccccc-ccccccc
Confidence            378999999999999999999888876   488999999999999999999  8889999999999976442 6678899


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      .++|++++++|+.                +|+||++||.++..+.+....|+++|+++.+|+|+|+.|++++|||||+|+
T Consensus       101 ~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~  180 (250)
T d1ydea1         101 AQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQAQAVPYVATKGAVTAMTKALALDESPYGVRVNCIS  180 (250)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEE
T ss_pred             HHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccccCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEe
Confidence            9999999999999                689999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCC---hHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGID---KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+|+|++.+....   .+.+++.....  |++|+++|+|
T Consensus       181 PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--pl~R~g~p~e  220 (250)
T d1ydea1         181 PGNIWTPLWEELAALMPDPRASIREGMLAQ--PLGRMGQPAE  220 (250)
T ss_dssp             ECSBCCHHHHHHHTTSSSHHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             eCCCCChhHHHHhhcCCCHHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999987765433   34455555555  9999999986

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-38  Score=233.02  Aligned_cols=171  Identities=22%  Similarity=0.242  Sum_probs=157.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|++++++++.+++..   +..+.+|++|+++++++++  +++++|+||||||....  .++.+++.+
T Consensus        24 ~la~~Ga~V~~~~r~~~~l~~~~~~~~~---~~~~~~Dv~~~~~v~~~~~--~~g~iDilVnnAg~~~~--~~~~~~~~~   96 (242)
T d1cyda_          24 ALHASGAKVVAVTRTNSDLVSLAKECPG---IEPVCVDLGDWDATEKALG--GIGPVDLLVNNAALVIM--QPFLEVTKE   96 (242)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHSTT---CEEEECCTTCHHHHHHHHT--TCCCCSEEEECCCCCCC--BCGGGCCHH
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHhcCC---CeEEEEeCCCHHHHHHHHH--HcCCCeEEEECCccccc--hhHHHHHHH
Confidence            3789999999999999999999888864   7789999999999998887  68899999999999877  899999999


Q ss_pred             HHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           81 KVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        81 ~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +|+..+++|+.                  .|+||+++|.++..+.+....|+++|+|+.+|+|+|+.|++++|||||+|+
T Consensus        97 ~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~  176 (242)
T d1cyda_          97 AFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTFPNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVN  176 (242)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccCCccccccchHHHHHHHHHHHHHHhCccCeecccCC
Confidence            99999999999                  589999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+++|++.+.... +++..+.+.+..  |++|+++|||
T Consensus       177 PG~i~T~~~~~~~~-~~~~~~~~~~~~--pl~R~~~pee  212 (242)
T d1cyda_         177 PTVVLTDMGKKVSA-DPEFARKLKERH--PLRKFAEVED  212 (242)
T ss_dssp             ECCBTTHHHHHHTC-CHHHHHHHHHHS--TTSSCBCHHH
T ss_pred             CCCccCHHHHhhcC-CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999887755 677888888887  9999999986

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=100.00  E-value=1.1e-38  Score=235.85  Aligned_cols=178  Identities=21%  Similarity=0.278  Sum_probs=156.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.+.++++.+++... .++.++.||+++++++++++++  .++|++|++|||||..... .++.++
T Consensus        24 ~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnaG~~~~~-~~~~~~  102 (260)
T d1zema1          24 RLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKIDFLFNNAGYQGAF-APVQDY  102 (260)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCC-BCGGGC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCeehhhhcccccc-Cccccc
Confidence            37899999999999999999998888665 6899999999999999999999  8889999999999986542 678999


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++.+++|+.                 .|+||++||.++..+.+.+..|+++|+|+.+|+|+|+.|++++|||||+
T Consensus       103 ~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~  182 (260)
T d1zema1         103 PSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGPPNMAAYGTSKGAIIALTETAALDLAPYNIRVNA  182 (260)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             cHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCCcchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEE
Confidence            99999999999999                 7999999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhc------------CCCh-HHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAM------------GIDK-KTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+|+|+|.....            ..++ +..+.+....  |++|+++|+|
T Consensus       183 I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Pl~R~g~ped  234 (260)
T d1zema1         183 ISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSV--PMRRYGDINE  234 (260)
T ss_dssp             EEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTS--TTSSCBCGGG
T ss_pred             eccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999764321            1122 3345555566  9999999987

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=100.00  E-value=1.1e-38  Score=234.60  Aligned_cols=175  Identities=21%  Similarity=0.272  Sum_probs=156.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+++..+++....++.++.||++|++++++++++  .++|+||+||||||....  .++.+++
T Consensus        25 ~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~--~~~~~~~  102 (251)
T d1zk4a1          25 KFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTLVNNAGIAVN--KSVEETT  102 (251)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCTTTCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeccccccc--cchhccc
Confidence            378999999999999999999988887556899999999999999999999  788999999999999877  8999999


Q ss_pred             HHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHH--hcCCCeEE
Q 042200           79 NEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVE--LGQYDIRV  138 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~--~~~~~i~v  138 (181)
                      .++|++++++|+.                  +++||++||.++..+.+....|+++|+++.+|+++++.|  ++++||||
T Consensus       103 ~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrV  182 (251)
T d1zk4a1         103 TAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGDPSLGAYNASKGAVRIMSKSAALDCALKDYDVRV  182 (251)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred             ccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccCCCchhHHHHHHHHhcchHHHHHHHhcCCCcEEE
Confidence            9999999999999                  358999999999999999999999999999999999998  56899999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+|+|+|....+  .++.........  |++|+++|||
T Consensus       183 N~I~PG~i~T~~~~~~~--~~~~~~~~~~~~--pl~R~~~ped  221 (251)
T d1zk4a1         183 NTVHPGYIKTPLVDDLP--GAEEAMSQRTKT--PMGHIGEPND  221 (251)
T ss_dssp             EEEEECCBCCHHHHTST--THHHHHTSTTTC--TTSSCBCHHH
T ss_pred             EEEeCCCCCChhHHhcC--CHHHHHHHHhCC--CCCCCcCHHH
Confidence            99999999999987754  333344444445  9999999986

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=100.00  E-value=7.8e-39  Score=236.60  Aligned_cols=176  Identities=22%  Similarity=0.264  Sum_probs=156.2

Q ss_pred             CcccCCCEEEEeecch-HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQD-DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+. +.+++..+++... .++.++.||+++++++++++++  .++|+||++|||||....  .++.+
T Consensus        26 ~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~  103 (261)
T d1geea_          26 RFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNAGLENP--VSSHE  103 (261)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCCCEeeccceecCC--cchhh
Confidence            3789999999999984 5667666666443 5889999999999999999999  788999999999999877  88999


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      ++.++|++++++|+.                  ++.||++||.++..+.+....|+++|+|+.+|+|+|+.|++++||||
T Consensus       104 ~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrV  183 (261)
T d1geea_         104 MSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRV  183 (261)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEE
T ss_pred             cCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhcccCccccccccCCccchhhHHHHHHHhhhhCcEE
Confidence            999999999999999                  34699999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+|+|++...... +++..+++.+..  |++|+++|||
T Consensus       184 N~I~PG~v~T~~~~~~~~-~~~~~~~~~~~~--pl~R~~~ped  223 (261)
T d1geea_         184 NNIGPGAINTPINAEKFA-DPEQRADVESMI--PMGYIGEPEE  223 (261)
T ss_dssp             EEEEECSBCSGGGHHHHH-SHHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEeeCcCcCHhHhhhcC-CHHHHHHHHhcC--CCCCCCCHHH
Confidence            999999999999877654 566667777676  9999999986

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.9e-38  Score=232.21  Aligned_cols=167  Identities=28%  Similarity=0.342  Sum_probs=152.9

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|++++++++.+++..  ++.++.||++|++++++++++  .+++++|++|||||....  .++.+++
T Consensus        25 ~la~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idilinnAG~~~~--~~~~~~~  100 (244)
T d1nffa_          25 AMVAEGAKVVFGDILDEEGKAMAAELAD--AARYVHLDVTQPAQWKAAVDTAVTAFGGLHVLVNNAGILNI--GTIEDYA  100 (244)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHTGG--GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTSC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhhC--cceEEEeecCCHHHHHHHHHHHHHHhCCCeEEEECCcccCC--CchhhCC
Confidence            3789999999999999999999998876  788999999999999999999  778999999999999877  8899999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++++++|+.                 .|+||++||.++..+.+.+..|+++|+++.+|+|+++.|++++|||||+|
T Consensus       101 ~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I  180 (244)
T d1nffa_         101 LTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGTVACHGYTATKFAVRGLTKSTALELGPSGIRVNSI  180 (244)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccccccccccchhhHHHHHHHHHHHHHHHhcccCEEEEEE
Confidence            9999999999999                 68999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|+|....++..        .+.  |++|+++|+|
T Consensus       181 ~PG~i~T~~~~~~~~~~--------~~~--pl~R~~~p~d  210 (244)
T d1nffa_         181 HPGLVKTPMTDWVPEDI--------FQT--ALGRAAEPVE  210 (244)
T ss_dssp             EECCBCSGGGTTSCTTC--------SCC--SSSSCBCHHH
T ss_pred             eeCCccChhHhhhhHHH--------Hhc--cccCCCCHHH
Confidence            99999999986654321        123  8899999976

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=100.00  E-value=1e-38  Score=236.11  Aligned_cols=177  Identities=16%  Similarity=0.210  Sum_probs=145.8

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+ .+.+++..+++...  .++.++.+|++|.+++++++++  .++|++|+||||||....  .++.
T Consensus        23 ~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~  100 (260)
T d1x1ta1          23 ALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRIDILVNNAGIQHT--ALIE  100 (260)
T ss_dssp             HHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCC--CCGG
T ss_pred             HHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCCCcEEEeecccccC--Cchh
Confidence            378999999999997 56666666655332  4799999999999999999999  888999999999999877  8899


Q ss_pred             cCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           76 DTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      +.+.++|++.+++|+.                 .|+||++||.++..+.+++..|+++|+++.+|+|+|+.|++++||||
T Consensus       101 ~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrV  180 (260)
T d1x1ta1         101 DFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVASANKSAYVAAKHGVVGFTKVTALETAGQGITA  180 (260)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEE
T ss_pred             hhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceeccCCcchhhhhhhhHHHhHHHHHHHhchhCcEE
Confidence            9999999999999999                 68999999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCC---------ChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGI---------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+|+|+|+......         +....+.+.+..  |++|+++|+|
T Consensus       181 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--Pl~R~g~ped  230 (260)
T d1x1ta1         181 NAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQ--PSLQFVTPEQ  230 (260)
T ss_dssp             EEEEECCBCC------------------------CHHHHC--TTCCCBCHHH
T ss_pred             EEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999998765432         111223344555  9999999986

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=100.00  E-value=8.2e-38  Score=232.16  Aligned_cols=181  Identities=44%  Similarity=0.748  Sum_probs=161.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+++++++..+++.....+.++.||+++++++++++++  .++|++|++|||||.....+..+.+.+
T Consensus        25 ~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~  104 (268)
T d2bgka1          25 LFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAG  104 (268)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcceeccccccccCCCcccccCc
Confidence            378999999999999999999999987666788999999999999999999  788999999999998765324577889


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccc-hhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEAL-YDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~-~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .++|+.++++|+.                 .|+||+++|..+..+.++. ..|+++|+|+.+|+|+|+.|++++|||||+
T Consensus       105 ~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~  184 (268)
T d2bgka1         105 NEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTAGEGVSHVYTATKHAVLGLTTSLCTELGEYGIRVNC  184 (268)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             HHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccccccccccccchhHHHHHhCHHHHHHHhChhCeEEEe
Confidence            9999999999999                 6899999999998876654 489999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|+|.......+++..++.......|++|+++|||
T Consensus       185 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~ped  225 (268)
T d2bgka1         185 VSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAED  225 (268)
T ss_dssp             EEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHHH
T ss_pred             cCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCHHH
Confidence            99999999999888877778878777765558899999986

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-38  Score=230.68  Aligned_cols=171  Identities=20%  Similarity=0.221  Sum_probs=156.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|++++++++.+++..   +..+.+|++|+++++++++  +++++|+||||||....  .++.+.+.+
T Consensus        26 ~la~~G~~V~~~~r~~~~l~~~~~~~~~---~~~~~~Dv~d~~~v~~~~~--~~g~iDilVnnAg~~~~--~~~~~~~~~   98 (244)
T d1pr9a_          26 ALHATGARVVAVSRTQADLDSLVRECPG---IEPVCVDLGDWEATERALG--SVGPVDLLVNNAAVALL--QPFLEVTKE   98 (244)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHSTT---CEEEECCTTCHHHHHHHHT--TCCCCCEEEECCCCCCC--BCGGGCCHH
T ss_pred             HHHHcCCEEEEEECCHHHHHHHHHhcCC---CeEEEEeCCCHHHHHHHHH--HhCCceEEEeccccccc--cchhhhhHH
Confidence            3789999999999999999999888864   7889999999999999887  67899999999999877  899999999


Q ss_pred             HHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEe
Q 042200           81 KVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIA  142 (181)
Q Consensus        81 ~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~  142 (181)
                      +|+..+++|+.                  .|+||++||.++..+.+....|+++|+|+.+|+|+|+.|++++|||||+|+
T Consensus        99 ~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~  178 (244)
T d1pr9a_          99 AFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAVTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVN  178 (244)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEE
T ss_pred             HHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccccchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence            99999999999                  689999999999999999999999999999999999999999999999999


Q ss_pred             cCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          143 HIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       143 Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||+|+|++.+...+ +++..+.+.+..  |++|+++|||
T Consensus       179 PG~v~T~~~~~~~~-~~~~~~~~~~~~--pl~R~~~pee  214 (244)
T d1pr9a_         179 PTVVMTSMGQATWS-DPHKAKTMLNRI--PLGKFAEVEH  214 (244)
T ss_dssp             ECCBCSHHHHTTSC-SHHHHHHHHTTC--TTCSCBCHHH
T ss_pred             eCcCcChHHhhhcc-ChHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999877654 566677777777  9999999986

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=100.00  E-value=1.3e-38  Score=235.18  Aligned_cols=175  Identities=21%  Similarity=0.253  Sum_probs=125.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+++++++..+++... .++.++.||+++++++++++++  .++ +++|++|||||....  .++.+
T Consensus        27 ~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~idilvnnAG~~~~--~~~~~  104 (259)
T d1xq1a_          27 EFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRS--KPTLD  104 (259)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTCCSEEEEECCC--------CC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCCcccccccccccCC--Cchhh
Confidence            37899999999999999999998887654 6899999999999999999998  666 689999999999877  88999


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      .+.++|+.++++|+.                 .|+||++||..+..+.+....|+++|+|+.+|+|+|+.|++++|||||
T Consensus       105 ~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN  184 (259)
T d1xq1a_         105 YTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRAN  184 (259)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEE
T ss_pred             CCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccccccccccccccccccchhhhhHHHHHHhcccCeEEE
Confidence            999999999999999                 689999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+|+|++.....+  ++..+...+..  |++|+++|||
T Consensus       185 ~V~PG~i~T~~~~~~~~--~~~~~~~~~~~--pl~R~~~ped  222 (259)
T d1xq1a_         185 AVAPAVIATPLAEAVYD--DEFKKVVISRK--PLGRFGEPEE  222 (259)
T ss_dssp             EEECCSCC-----------------------------CCGGG
T ss_pred             EeccCcccCHHhhhhch--HHHHHHHHhCC--CCCCCcCHHH
Confidence            99999999999877543  34455556666  9999999987

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-37  Score=228.21  Aligned_cols=169  Identities=22%  Similarity=0.279  Sum_probs=150.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+++++++..+++    ++.++.||++|++++++++++  .+++++|+||||||+...  .++.+.+
T Consensus        24 ~l~~~G~~V~~~~r~~~~l~~~~~~~----~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~   97 (242)
T d1ulsa_          24 LFAKEGARLVACDIEEGPLREAAEAV----GAHPVVMDVADPASVERGFAEALAHLGRLDGVVHYAGITRD--NFHWKMP   97 (242)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHTT----TCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCCCCCC--CCGGGCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHc----CCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEECCccccc--CchhhCc
Confidence            37899999999999999999888776    466889999999999999999  788999999999999877  8899999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++.+++|+.                 .+.++++|| .+..+.++...|+++|+|+.+|+|+|+.|++++|||||+|
T Consensus        98 ~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I  176 (242)
T d1ulsa_          98 LEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTAS-RVYLGNLGQANYAASMAGVVGLTRTLALELGRWGIRVNTL  176 (242)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECC-GGGGCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             chhhhccccccchhhhhhhhhccccccccccceeeeecc-ccccCCCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEE
Confidence            9999999999999                 455666555 5778889999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++....   .++..+......  |++|+++|||
T Consensus       177 ~PG~v~T~~~~~~---~~~~~~~~~~~~--pl~R~~~ped  211 (242)
T d1ulsa_         177 APGFIETRMTAKV---PEKVREKAIAAT--PLGRAGKPLE  211 (242)
T ss_dssp             EECSBCCTTTSSS---CHHHHHHHHHTC--TTCSCBCHHH
T ss_pred             eeCcccChhhhcC---CHHHHHHHHhcC--CCCCCCCHHH
Confidence            9999999997665   456667777777  9999999986

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=100.00  E-value=1.2e-38  Score=234.66  Aligned_cols=172  Identities=27%  Similarity=0.280  Sum_probs=154.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.++.||+++++++++++++  .++|++|++|||||....  .++.+.+
T Consensus        24 ~la~~Ga~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~--~~~~~~~   99 (254)
T d1hdca_          24 QAVAAGARVVLADVLDEEGAATARELGD--AARYQHLDVTIEEDWQRVVAYAREEFGSVDGLVNNAGISTG--MFLETES   99 (254)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHTTGG--GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--SCGGGSC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhCC--ceEEEEcccCCHHHHHHHHHHHHHHcCCccEEEecCccccc--ccccccc
Confidence            3789999999999999999999888865  899999999999999999999  788999999999999877  8899999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++.+++|+.                 .|+||++||.++..+.++...|+++|+|+.+|+|+|+.|++++|||||+|
T Consensus       100 ~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I  179 (254)
T d1hdca_         100 VERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGLALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSV  179 (254)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             ccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccccchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEe
Confidence            9999999999999                 69999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhccccccc-ccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVL-KAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e  181 (181)
                      +||+++|+|+....+..   .+...+..  |++|++ +|+|
T Consensus       180 ~PG~v~T~~~~~~~~~~---~~~~~~~~--pl~R~g~~Ped  215 (254)
T d1hdca_         180 HPGMTYTPMTAETGIRQ---GEGNYPNT--PMGRVGNEPGE  215 (254)
T ss_dssp             EECSBCCHHHHHHTCCC---STTSCTTS--TTSSCB-CHHH
T ss_pred             eeCcccCccchhcCHHH---HHHHHhCC--CCCCCCCCHHH
Confidence            99999999987764432   23334455  889998 4765

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=100.00  E-value=1.4e-37  Score=228.19  Aligned_cols=174  Identities=24%  Similarity=0.234  Sum_probs=140.4

Q ss_pred             CcccCCCEEEEeecch-HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|++ +..+...++...  ++.++.||++|++++++++++  .++|++|++|||||+...  .++.+.
T Consensus        24 ~la~~Ga~V~~~~~~~~~~~~~~~~~~g~--~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~--~~~~~~   99 (247)
T d2ew8a1          24 RFAVEGADIAIADLVPAPEAEAAIRNLGR--RVLTVKCDVSQPGDVEAFGKQVISTFGRCDILVNNAGIYPL--IPFDEL   99 (247)
T ss_dssp             HHHHTTCEEEEEESSCCHHHHHHHHHTTC--CEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGGC
T ss_pred             HHHHCCCEEEEEECCchHHHHHHHHHcCC--cEEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCC--CChHhC
Confidence            3789999999999976 444555555554  899999999999999999999  788999999999999877  899999


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      +.++|++.+++|+.                 .|+||++||.++..+.+....|++||+|+.+|+|+|+.|++++|||||+
T Consensus       100 ~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~  179 (247)
T d2ew8a1         100 TFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKIEAYTHYISTKAANIGFTRALASDLGKDGITVNA  179 (247)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCCSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred             CHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccCcccccchhhhccHHHHHHHHHHHhcccCeEEEE
Confidence            99999999999999                 6899999999999999999999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|++......  ++..+. ......|++|+++|||
T Consensus       180 I~PG~i~T~~~~~~~~--~~~~~~-~~~~~~~l~r~~~ped  217 (247)
T d2ew8a1         180 IAPSLVRTATTEASAL--SAMFDV-LPNMLQAIPRLQVPLD  217 (247)
T ss_dssp             EEECCC---------------------CTTSSSCSCCCTHH
T ss_pred             EeeCCCCCcccccccc--chhHHH-HHHHhccCCCCCCHHH
Confidence            9999999998766432  111222 2222238899999986

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.1e-37  Score=228.78  Aligned_cols=172  Identities=19%  Similarity=0.234  Sum_probs=147.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+++..+ ..+++.    ..+++||++|.+++++++++  .++|+||+||||||....  .++.+.+
T Consensus        24 ~la~~G~~V~~~~~~~~~~~-~~~~~~----~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~--~~~~~~~   96 (248)
T d2d1ya1          24 AFAREGALVALCDLRPEGKE-VAEAIG----GAFFQVDLEDERERVRFVEEAAYALGRVDVLVNNAAIAAP--GSALTVR   96 (248)
T ss_dssp             HHHHTTCEEEEEESSTTHHH-HHHHHT----CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--BCTTTCC
T ss_pred             HHHHCCCEEEEEECCHHHHH-HHHHcC----CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEEeCcCCCC--CChhhCC
Confidence            37899999999999987644 445543    45789999999999999999  888999999999999877  8899999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++++++|+.                 .|+||+++|.++..+.+....|+++|+++.+|+|+|+.|++++|||||+|
T Consensus        97 ~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I  176 (248)
T d2d1ya1          97 LPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAEQENAAYNASKGGLVNLTRSLALDLAPLRIRVNAV  176 (248)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEE
Confidence            9999999999999                 68999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCC--Ch-HHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGI--DK-KTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|++.......  ++ +..+.+.+..  |++|+++|+|
T Consensus       177 ~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~--pl~R~~~ped  217 (248)
T d2d1ya1         177 APGAIATEAVLEAIALSPDPERTRRDWEDLH--ALRRLGKPEE  217 (248)
T ss_dssp             EECSBCCHHHHHHHC--------CHHHHTTS--TTSSCBCHHH
T ss_pred             eeCCCCCchHHHHhhcCCCHHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999987665432  22 2334444444  8999999986

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=100.00  E-value=5.4e-37  Score=226.37  Aligned_cols=177  Identities=21%  Similarity=0.256  Sum_probs=153.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--ccc-CCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKF-GKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~-~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|++++++++.+++... ..+.++.||+++.+++++++++  +++ +.+|+||||||....  ..+.+
T Consensus        25 ~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~idilinnag~~~~--~~~~~  102 (258)
T d1ae1a_          25 ELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIH--KEAKD  102 (258)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSCCCEEEECCCCCCC--CCTTT
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCCcEEEecccccccc--Ccccc
Confidence            37899999999999999999888887654 6788999999999999999998  666 579999999999887  89999


Q ss_pred             CCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      ++.++|++++++|+.                 .|+||++||..+..+.+.+..|+++|+++++|+|.|++|++++|||||
T Consensus       103 ~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN  182 (258)
T d1ae1a_         103 FTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVN  182 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred             CCHHHHhhhhhhccccccccccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHHHhcCcCcEEEE
Confidence            999999999999999                 789999999999999999999999999999999999999999999999


Q ss_pred             EEecCcccCcccchhcCC---ChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI---DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+++|+|....+..   ..+..+++....  |++|+++|+|
T Consensus       183 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~--plgR~~~ped  225 (258)
T d1ae1a_         183 SVAPGVILTPLVETAIKKNPHQKEEIDNFIVKT--PMGRAGKPQE  225 (258)
T ss_dssp             EEEECSBC-------------CHHHHHHHHHHS--TTCSCBCHHH
T ss_pred             EEeeCcccCcchhhhhhhhhhhHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999998776554   556777777777  9999999986

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=7e-38  Score=228.43  Aligned_cols=164  Identities=18%  Similarity=0.193  Sum_probs=138.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.+          .++..+.+|++|++++++++++  .+++++|++|||||....  .++.+.+
T Consensus        26 ~la~~Ga~V~~~~r~~~~~----------~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnnAG~~~~--~~~~~~~   93 (237)
T d1uzma1          26 RLAADGHKVAVTHRGSGAP----------KGLFGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSNAGLSAD--AFLMRMT   93 (237)
T ss_dssp             HHHHTTCEEEEEESSSCCC----------TTSEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEECSCCC-------CCC
T ss_pred             HHHHCCCEEEEEECCcchh----------cCceEEEEecCCHHHHHHHHHHHHHhcCCceEEEeeeccccc--ccHhhCC
Confidence            3789999999999986432          2577899999999999999999  788999999999999877  8899999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++++++|+.                 .|+||++||.++..+.++...|++||+|+.+|+|+|+.|++++|||||+|
T Consensus        94 ~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I  173 (237)
T d1uzma1          94 EEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIGNQANYAASKAGVIGMARSIARELSKANVTANVV  173 (237)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEE
T ss_pred             HHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCCcccHHHHHHHHHHHHHHHHHHhhhhcCCceeeee
Confidence            9999999999999                 68999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+++|+|.+.+   +++..+...+.+  |++|+++|||
T Consensus       174 ~PG~v~T~~~~~~---~~~~~~~~~~~~--pl~R~~~ped  208 (237)
T d1uzma1         174 APGYIDTDMTRAL---DERIQQGALQFI--PAKRVGTPAE  208 (237)
T ss_dssp             EECSBCCHHHHHS---CHHHHHHHGGGC--TTCSCBCHHH
T ss_pred             eeCcCCChhhhcc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999998765   445556666666  9999999986

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=100.00  E-value=2.6e-37  Score=227.48  Aligned_cols=175  Identities=23%  Similarity=0.274  Sum_probs=153.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|++++++++.+++..  +..++.+|+++.+++++++++  .+++++|++|||||....  .++.+.+
T Consensus        25 ~la~~Ga~V~~~~~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDilVnnAG~~~~--~~~~~~~  100 (253)
T d1hxha_          25 LLLGEGAKVAFSDINEAAGQQLAAELGE--RSMFVRHDVSSEADWTLVMAAVQRRLGTLNVLVNNAGILLP--GDMETGR  100 (253)
T ss_dssp             HHHHTTCEEEEECSCHHHHHHHHHHHCT--TEEEECCCTTCHHHHHHHHHHHHHHHCSCCEEEECCCCCCC--BCTTTCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHhCC--CeEEEEeecCCHHHHHHHHHHHHHHhCCCCeEEecccccCC--CCcccCC
Confidence            3789999999999999999999999876  788999999999999999999  788999999999999877  8899999


Q ss_pred             HHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC--CCeEEEE
Q 042200           79 NEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ--YDIRVNS  140 (181)
Q Consensus        79 ~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~--~~i~v~~  140 (181)
                      .++|++.+++|+.                +|+||++||.++..+.+....|+++|+|+.+|+|+++.|+++  ++||||+
T Consensus       101 ~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~  180 (253)
T d1hxha_         101 LEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPIEQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNS  180 (253)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             HHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCccccccccchhHHHHHHHHHHHHHHhhcCCCEEEEE
Confidence            9999999999998                799999999999999999999999999999999999999987  5699999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHh--hcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYAS--ANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~e  181 (181)
                      |+||+++|++.+...+...  .++.....  ..|++|+++|||
T Consensus       181 I~PG~i~T~~~~~~~~~~~--~~~~~~~~~~~~~~gr~~~ped  221 (253)
T d1hxha_         181 IHPDGIYTPMMQASLPKGV--SKEMVLHDPKLNRAGRAYMPER  221 (253)
T ss_dssp             EEESEECCHHHHHHSCTTC--CHHHHBCBTTTBTTCCEECHHH
T ss_pred             EeECCCcCHhHHhhCcchh--hHHHHHhCccccccCCCCCHHH
Confidence            9999999999876554321  12222221  127899999975

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=7.5e-37  Score=227.53  Aligned_cols=181  Identities=21%  Similarity=0.205  Sum_probs=151.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC----CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|++|++++|++++++++.+++...    .++.++.+|+++++++++++++  .+||++|++|||||.....+...
T Consensus        23 ~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~  102 (274)
T d1xhla_          23 IFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFGKIDILVNNAGANLADGTAN  102 (274)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcCCceEEEeeccccccccccc
Confidence            37899999999999999999888877432    4789999999999999999999  78899999999999765422455


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.+.++|+.++++|+.                 .+.|+++||.++..+.+++..|+++|+|+.+|+|+++.|++++|||
T Consensus       103 ~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIr  182 (274)
T d1xhla_         103 TDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQAHSGYPYYACAKAALDQYTRCTAIDLIQHGVR  182 (274)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGTCE
T ss_pred             ccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhccccCCCCceehhhhhHHHHHHHHHHHHHhHhCCc
Confidence            66788999999999999                 6788888888888899999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCCC--hHHHHHHHHHh--hcccccccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGID--KKTFKELLYAS--ANLKGVVLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~e  181 (181)
                      ||+|+||+|+|++........  .+..+++....  ..|++|+++|+|
T Consensus       183 VN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~g~ped  230 (274)
T d1xhla_         183 VNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHCGKPEE  230 (274)
T ss_dssp             EEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             eeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCCcCHHH
Confidence            999999999999887764321  12223332221  139999999986

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=100.00  E-value=1.4e-36  Score=225.91  Aligned_cols=180  Identities=18%  Similarity=0.233  Sum_probs=147.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC----CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DR   72 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~   72 (181)
                      +|+++|++|++++|+.++++++.+++...    .++.++.||+++++++++++++  .++|++|++|||||.....  ..
T Consensus        24 ~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~  103 (272)
T d1xkqa_          24 LFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGT  103 (272)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHhCCceEEEeCCcccCcccccc
Confidence            37899999999999999999988887542    4789999999999999999999  7889999999999987651  12


Q ss_pred             CcccCCHHHHHHhhheeec----------------ceeEEEecc-ccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           73 TTLDTDNEKVKRVMIMVVF----------------LGVLLFTAN-LATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~----------------~~~iv~iss-~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      ...+.+.++|++++++|+.                +|.+|+++| .++..+.+.+..|+++|+|+.+|+|+|+.|++++|
T Consensus       104 ~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~g  183 (272)
T d1xkqa_         104 TGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQAQPDFLYYAIAKAALDQYTRSTAIDLAKFG  183 (272)
T ss_dssp             CGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             cchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccCCCCcchhhhHHHHHHHHHHHHHHHhcccC
Confidence            3346778899999999998                456666655 56788999999999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCCChHHH---HHHHHHh--hcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGIDKKTF---KELLYAS--ANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~~~~~~---~~~~~~~--~~~~~~~~~~~e  181 (181)
                      ||||+|+||+|+|+|+...... ++..   .+.....  ..|++|+++|||
T Consensus       184 IrVN~I~PG~i~T~~~~~~~~~-~~~~~~~~~~~~~~~~~~PlgR~g~ped  233 (272)
T d1xkqa_         184 IRVNSVSPGMVETGFTNAMGMP-DQASQKFYNFMASHKECIPIGAAGKPEH  233 (272)
T ss_dssp             CEEEEEEECCBCSSHHHHTTCC-HHHHHHHHHHHHHCTTTCTTSSCBCHHH
T ss_pred             eEEEEEeeCCCcchhhhccCCc-hHHHHHHHHHHHHHhcCCCCCCCcCHHH
Confidence            9999999999999998776542 2222   2222211  238999999986

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=100.00  E-value=2e-36  Score=224.23  Aligned_cols=179  Identities=24%  Similarity=0.235  Sum_probs=140.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC----CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD----ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DR   72 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~----~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~   72 (181)
                      +|+++|++|++++|+.++++++.+++...    .++.++.+|+++.+++++++++  .++|++|++|||||.....  ..
T Consensus        24 ~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~  103 (264)
T d1spxa_          24 LFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGKLDILVNNAGAAIPDSQSK  103 (264)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC---------
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEeecccccccCCcccc
Confidence            37899999999999999999888877432    4699999999999999999999  8889999999999986431  13


Q ss_pred             CcccCCHHHHHHhhheeec----------------ceeEEEecccc-ccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           73 TTLDTDNEKVKRVMIMVVF----------------LGVLLFTANLA-TETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~----------------~~~iv~iss~~-~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      .+.+.+.++|+..+++|+.                .|.+|+++|.. +..+.+....|+++|+|+.+|+|+|+.|++++|
T Consensus       104 ~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~g  183 (264)
T d1spxa_         104 TGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHATPDFPYYSIAKAAIDQYTRNTAIDLIQHG  183 (264)
T ss_dssp             ----CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSCCTTSHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred             ccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeeccccccCCCchhhhhhhhhHHHHHHHHHHHhcccC
Confidence            4566788999999999999                56777777765 577889999999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCC------ChHHHHHHHHHhhcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGI------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||||+|+||+|+|+|.......      ..+..+.+.+..  |++|+++|+|
T Consensus       184 IrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~--Pl~R~g~ped  233 (264)
T d1spxa_         184 IRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECV--PAGVMGQPQD  233 (264)
T ss_dssp             CEEEEEEECCBCCCC--------------HHHHHHHHHHC--TTSSCBCHHH
T ss_pred             eEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999999987654321      223344455555  9999999986

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=100.00  E-value=4.4e-36  Score=221.87  Aligned_cols=174  Identities=18%  Similarity=0.160  Sum_probs=151.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+++++..+++...  .++.++.||+++++++++++++  .+++++|++|||||....  .++.+
T Consensus        28 ~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnAg~~~~--~~~~~  105 (260)
T d1h5qa_          28 AVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPISGLIANAGVSVV--KPATE  105 (260)
T ss_dssp             HHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEEEEEECCCCCCC--SCGGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCCCcEeccccccccc--CCHHH
Confidence            37899999999999988777776665332  4799999999999999999999  788999999999999877  88999


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccc-------cCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATET-------IGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~-------~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      .+.++|++.+++|+.                  .+.|+++++.....       +.++...|+++|+|+.+|+|+|+.|+
T Consensus       106 ~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el  185 (260)
T d1h5qa_         106 LTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIINQSSLNGSLTQVFYNSSKAACSNLVKGLAAEW  185 (260)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCCEEETTEECSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             hccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccccccccccCccccchhhhhhhHHHHHHHHHHHh
Confidence            999999999999998                  67788877765543       33567899999999999999999999


Q ss_pred             cCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          132 GQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +++|||||+|+||+|+|++....   +++..+...+..  |++|+++|||
T Consensus       186 ~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~--pl~R~g~ped  230 (260)
T d1h5qa_         186 ASAGIRVNALSPGYVNTDQTAHM---DKKIRDHQASNI--PLNRFAQPEE  230 (260)
T ss_dssp             GGGTEEEEEEEECSBCCGGGGGS---CHHHHHHHHHTC--TTSSCBCGGG
T ss_pred             chhCeEEeecCCCcccCcchhcc---CHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999999999999998765   557777777777  9999999987

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=100.00  E-value=4.2e-37  Score=226.39  Aligned_cols=173  Identities=12%  Similarity=0.087  Sum_probs=150.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+.++++....     ..+..+|+++.+++++++++  ++||+||++|||||..... .++.+.+
T Consensus        19 ~la~~Ga~V~i~~r~~~~~~~~~~~~-----~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg~~~~~-~~~~~~~   92 (252)
T d1zmta1          19 RLSEAGHTVACHDESFKQKDELEAFA-----ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDIFAPEF-QPIDKYA   92 (252)
T ss_dssp             HHHHTTCEEEECCGGGGSHHHHHHHH-----HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECCCCCCC-CCGGGSC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHhhh-----CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCcCCCCC-CChhhCC
Confidence            37899999999999987776654322     22457899999999999998  8899999999999976442 6888999


Q ss_pred             HHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           79 NEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        79 ~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .++|++.+++|+.                 .|+||++||.++..+.+....|+++|+++.+|+|+|+.|++++|||||+|
T Consensus        93 ~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I  172 (252)
T d1zmta1          93 VEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWKELSTYTSARAGACTLANALSKELGEYNIPVFAI  172 (252)
T ss_dssp             HHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEE
T ss_pred             HHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccccccccccccccHHHHHHHHHHHhcccCcEEEEE
Confidence            9999999999998                 68999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhc-----CCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAM-----GIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+|+|++.....     +..++..+.+.+..  |++|+++|||
T Consensus       173 ~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~--pl~R~g~ped  215 (252)
T d1zmta1         173 GPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVT--ALQRLGTQKE  215 (252)
T ss_dssp             EESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHS--SSSSCBCHHH
T ss_pred             ecCCCcCcchhhhhhcccccCCHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999999876543     23667777788777  9999999986

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=100.00  E-value=4.1e-36  Score=219.48  Aligned_cols=154  Identities=17%  Similarity=0.264  Sum_probs=143.2

Q ss_pred             cccCCCE-------EEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC
Q 042200            2 FIQHRAK-------VIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         2 l~~~G~~-------Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~   71 (181)
                      |+++|++       |++++|+.+.++++.+++.+. .++.++.||++|.+++++++++  .++|++|+||||||....  
T Consensus        21 la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~--   98 (240)
T d2bd0a1          21 FARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERYGHIDCLVNNAGVGRF--   98 (240)
T ss_dssp             HHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHTSCCSEEEECCCCCCC--
T ss_pred             HHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCcceeecccccccC--
Confidence            6778886       999999999999998888665 6889999999999999999999  889999999999999877  


Q ss_pred             CCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           72 RTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      .++.+.+.++|++++++|+.                 .|+||++||.++..+.+++..|+++|+|+.+|+++|+.|++++
T Consensus        99 ~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~~~~~~Y~asK~al~~lt~~la~el~~~  178 (240)
T d2bd0a1          99 GALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAATKAFRHSSIYCMSKFGQRGLVETMRLYARKC  178 (240)
T ss_dssp             CCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             CccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhcCCCCCChHHHHHHHHHHHHHHHHHHHhCcC
Confidence            89999999999999999999                 6899999999999999999999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMGI  157 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~~  157 (181)
                      |||||+|+||+++|+|++...+.
T Consensus       179 gIrvn~i~PG~v~T~~~~~~~~~  201 (240)
T d2bd0a1         179 NVRITDVQPGAVYTPMWGKVDDE  201 (240)
T ss_dssp             TEEEEEEEECCBCSTTTCCCCST
T ss_pred             CeEEEEeeeCcccCchhhhcCHh
Confidence            99999999999999998776543

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=100.00  E-value=3.5e-36  Score=220.03  Aligned_cols=171  Identities=21%  Similarity=0.266  Sum_probs=148.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|++++|+.+++++..+++..  ++.+++||+++++++++++++  .+++++|++|||||....  .++.+.+
T Consensus        24 ~l~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiLinnAg~~~~--~~~~~~~   99 (241)
T d2a4ka1          24 LFAREGASLVAVDREERLLAEAVAALEA--EAIAVVADVSDPKAVEAVFAEALEEFGRLHGVAHFAGVAHS--ALSWNLP   99 (241)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHTCCS--SEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEEGGGGTTT--TC----C
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHcCC--ceEEEEecCCCHHHHHHHHHHHHHHhCCccEeccccccccc--cchhhhh
Confidence            3789999999999999999999888876  899999999999999999999  778999999999999877  8899999


Q ss_pred             HHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           79 NEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        79 ~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      .++|+..+++|+.               .+.++++ |..+..+.+++..|+++|+|+++|+|+|++|++++|||||+|+|
T Consensus       100 ~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~-ss~a~~~~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~P  178 (241)
T d2a4ka1         100 LEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLT-GSVAGLGAFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLP  178 (241)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEE-CCCTTCCHHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEE
T ss_pred             ccccccccccccccccccccccccccccccceeec-cccccccccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeecc
Confidence            9999999999999               4445544 44555666889999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+++|++...+   .++..+++.+..  |++|+++|+|
T Consensus       179 G~v~T~~~~~~---~~~~~~~~~~~~--p~~r~~~p~d  211 (241)
T d2a4ka1         179 GLIQTPMTAGL---PPWAWEQEVGAS--PLGRAGRPEE  211 (241)
T ss_dssp             CSBCCGGGTTS---CHHHHHHHHHTS--TTCSCBCHHH
T ss_pred             CcCCCHHHHhh---hHhHHHHHHhCC--CCCCCcCHHH
Confidence            99999987665   567777887777  9999999976

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-36  Score=225.35  Aligned_cols=176  Identities=16%  Similarity=0.173  Sum_probs=152.8

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC------CCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS------DELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDR   72 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~------~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~   72 (181)
                      +|+++|++|++++|+.+++++..+++..      ..++.++.||++|++++++++++  .+++++|+||||||....  .
T Consensus        31 ~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDiLVnnAg~~~~--~  108 (297)
T d1yxma1          31 ELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFL--S  108 (297)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--C
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHHHhCCeEEEEeecccccc--C
Confidence            3789999999999999998888776632      15899999999999999999999  778999999999998877  8


Q ss_pred             CcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           73 TTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                      ++.+.+.++|++.+++|+.                 .+.||++|+ ++..+.+....|+++|+|+.+|+|+++.|++++|
T Consensus       109 ~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss-~~~~~~~~~~~Y~asKaal~~ltk~lA~el~~~g  187 (297)
T d1yxma1         109 PAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIV-PTKAGFPLAVHSGAARAGVYNLTKSLALEWACSG  187 (297)
T ss_dssp             CGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECC-CCTTCCTTCHHHHHHHHHHHHHHHHHHHHTGGGT
T ss_pred             chhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccc-cccccccccccchhHHHHHHHHHHHHHHHhcccC
Confidence            9999999999999999999                 677888765 5667788999999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchhcCC-ChHHHHHHHHHhhcccccccccCC
Q 042200          136 IRVNSIAHIVSATPFFCNAMGI-DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ||||+|+||+|.|++....... .++..+...+..  |++|+++|+|
T Consensus       188 IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--plgR~g~ped  232 (297)
T d1yxma1         188 IRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKI--PAKRIGVPEE  232 (297)
T ss_dssp             EEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGS--TTSSCBCTHH
T ss_pred             ceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcC--CCCCCcCHHH
Confidence            9999999999999987654432 445556666666  9999999986

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-35  Score=218.15  Aligned_cols=169  Identities=18%  Similarity=0.227  Sum_probs=146.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.+++++..+++...   .++.++.||++++++++++++.  .++|++|+||||||....  .   
T Consensus        22 ~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVnnAg~~~~--~---   96 (254)
T d2gdza1          22 ALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGRLDILVNNAGVNNE--K---   96 (254)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCCCCCS--S---
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCCcCeeccccccccc--c---
Confidence            37899999999999999999988887653   5799999999999999999999  788999999999998654  2   


Q ss_pred             cCCHHHHHHhhheeec--------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHH--HHHHhcC
Q 042200           76 DTDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKN--LCVELGQ  133 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~--la~~~~~  133 (181)
                           +|++.+++|+.                    .|+||++||.++..+.+.+..|+++|+|+.+|+|+  |+.|+++
T Consensus        97 -----~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltrs~ala~e~~~  171 (254)
T d2gdza1          97 -----NWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPVAQQPVYCASKHGIVGFTRSAALAANLMN  171 (254)
T ss_dssp             -----SHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             -----cchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCCCCccchHHHHHHHHHHHHHHHHHHHhcC
Confidence                 36777777776                    37899999999999999999999999999999997  6889999


Q ss_pred             CCeEEEEEecCcccCcccchhcCC-----ChHHHHHHHHHhhcccccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAMGI-----DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|||||+|+||+|+|+|++...+.     ..+..+.+...+  |++|+++|||
T Consensus       172 ~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~--p~~r~~~ped  222 (254)
T d2gdza1         172 SGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMI--KYYGILDPPL  222 (254)
T ss_dssp             CCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHH--HHHCCBCHHH
T ss_pred             CCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999999999998776532     234556666666  8999999975

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=1.8e-35  Score=218.21  Aligned_cols=178  Identities=17%  Similarity=0.147  Sum_probs=144.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~~   76 (181)
                      +|+++|++|++++|+++..+...+.........++.+|+++.++++++++.  .+++++|++|||||.....  ...+.+
T Consensus        29 ~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~  108 (256)
T d1ulua_          29 KLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYID  108 (256)
T ss_dssp             HHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGG
T ss_pred             HHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCCceEEEeccccccccccccchhh
Confidence            378999999999998654444332222224678899999999999999999  7789999999999986431  145678


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.++|+..+++|+.               .|+||++||..+..+.+....|+++|+|+.+|+|+++.|++++|||||+|
T Consensus       109 ~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I  188 (256)
T d1ulua_         109 TRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASEKVVPKYNVMAIAKAALEASVRYLAYELGPKGVRVNAI  188 (256)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEE
T ss_pred             hhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHhcCCCCCchHHHHHHHHHHHHHHHHHHHhcccCCEEeee
Confidence            889999999999998               78999999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||++.|++...... .++..+.+.+..  |++|+++|||
T Consensus       189 ~PG~i~t~~~~~~~~-~~~~~~~~~~~~--pl~R~~~ped  225 (256)
T d1ulua_         189 SAGPVRTVAARSIPG-FTKMYDRVAQTA--PLRRNITQEE  225 (256)
T ss_dssp             EECCC-----------CHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             ccceeeeccccchhh-hHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999998766543 567777778777  9999999986

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=100.00  E-value=4.1e-35  Score=218.29  Aligned_cols=176  Identities=21%  Similarity=0.194  Sum_probs=147.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC---CCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD---RTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~---~~~~   75 (181)
                      +|+++|++|++++|+++++++..+++..  ++..+.+|+++.+++++++++  .+++++|++|||||+.....   ....
T Consensus        24 ~la~~Ga~V~i~~r~~~~l~~~~~~~~~--~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~  101 (276)
T d1bdba_          24 RFVAEGAKVAVLDKSAERLAELETDHGD--NVLGIVGDVRSLEDQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPE  101 (276)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHGG--GEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCT
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHcCC--CeeEEecccccHHHHHHHHHHHHHHhCCcccccccccccCCCCccccccc
Confidence            3789999999999999999988888765  899999999999999999999  78899999999999865420   1223


Q ss_pred             cCCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEE
Q 042200           76 DTDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVN  139 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~  139 (181)
                      +.+.+.|++++++|+.                +|.||+++|..+..+.+....|+++|+|+.+|+|+|+.|++++ ||||
T Consensus       102 e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~~~~~~~~~Y~asKaal~~ltr~lA~ela~~-IrVN  180 (276)
T d1bdba_         102 ESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGFYPNGGGPLYTAAKHAIVGLVRELAFELAPY-VRVN  180 (276)
T ss_dssp             TTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGTSTTSSCHHHHHHHHHHHHHHHHHHHHHTTT-CEEE
T ss_pred             cchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhccCCCCCchHHHHHHHHHHHHHHHHHHhhcc-eEEc
Confidence            3445679999999998                7899999999999999999999999999999999999999985 9999


Q ss_pred             EEecCcccCcccchhcCC-------ChHHHHHHHHHhhcccccccccCC
Q 042200          140 SIAHIVSATPFFCNAMGI-------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|+||+|+|+|.......       .++..+.+....  |++|+++|+|
T Consensus       181 ~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~--PlgR~g~pee  227 (276)
T d1bdba_         181 GVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVL--PIGRMPEVEE  227 (276)
T ss_dssp             EEEECCCCSCCCCCGGGC---------CHHHHHTTTC--TTSSCCCGGG
T ss_pred             ccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999999987554322       222333444444  9999999987

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-34  Score=213.86  Aligned_cols=174  Identities=23%  Similarity=0.247  Sum_probs=150.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|++++++++.+++...   .++.++.||+++++++++++++  .++++||++|||||....  .++.
T Consensus        29 ~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~iD~lVnnAg~~~~--~~~~  106 (257)
T d1xg5a_          29 ALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARP--DTLL  106 (257)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCCCSEEEECCCCCCC--CCTT
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCCCCEEEecccccCC--Cccc
Confidence            37899999999999999999988887543   5789999999999999999999  788999999999999877  8899


Q ss_pred             cCCHHHHHHhhheeec-------------------ceeEEEecccccccc--CccchhhHhhHHHHHHHHHHHHHHh--c
Q 042200           76 DTDNEKVKRVMIMVVF-------------------LGVLLFTANLATETI--GEALYDYLMSKYAVLGLMKNLCVEL--G  132 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~--~~~~~~y~~sK~a~~~l~~~la~~~--~  132 (181)
                      +.+.++|+..+++|+.                   +|+||++||.++...  .+....|+++|+++.+|+|+|+.|+  +
T Consensus       107 ~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~p~~~~~~Y~~sKaal~~ltr~la~el~~~  186 (257)
T d1xg5a_         107 SGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRVLPLSVTHFYSATKYAVTALTEGLRQELREA  186 (257)
T ss_dssp             TCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSCCSCGGGHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             cccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcCCCCCcccHHHHHHHHHHHhCHHHHHHHHHhC
Confidence            9999999999999998                   589999999998754  4556779999999999999999998  7


Q ss_pred             CCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          133 QYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++||+||+|+||+++|++.....+   +..+......  |++|+++|||
T Consensus       187 ~~~I~vn~i~PG~i~t~~~~~~~~---~~~~~~~~~~--~~~r~~~ped  230 (257)
T d1xg5a_         187 QTHIRATCISPGVVETQFAFKLHD---KDPEKAAATY--EQMKCLKPED  230 (257)
T ss_dssp             TCCCEEEEEEESCBCSSHHHHHTT---TCHHHHHHHH--C---CBCHHH
T ss_pred             CCCEEEEEEeCCCCCChhhhhcCh---hhHHHHHhcC--CCCCCcCHHH
Confidence            899999999999999999887754   3345566666  8899999986

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=217.12  Aligned_cols=177  Identities=20%  Similarity=0.146  Sum_probs=154.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.+++++..+++...  .++.++.||+++.++++++++.  .+++++|++|||||....  ..+..
T Consensus        44 ~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iDilvnnAg~~~~--~~~~~  121 (294)
T d1w6ua_          44 LLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPNIVINNAAGNFI--SPTER  121 (294)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEEECCCCCCC--SCGGG
T ss_pred             HHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccchhhhhhhhccc--ccccc
Confidence            37899999999999999888887766432  5788999999999999999988  788999999999998877  88888


Q ss_pred             CCHHHHHHhhheeec------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           77 TDNEKVKRVMIMVVF------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+.++|+..+.+|+.                  .+.++.++|.++..+.+....|+++|+|+.+|+|+++.+++++||||
T Consensus       122 ~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~~~~~~~YsasKaal~~ltk~lA~ela~~gIrV  201 (294)
T d1w6ua_         122 LSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETGSGFVVPSASAKAGVEAMSKSLAAEWGKYGMRF  201 (294)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEE
T ss_pred             chhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhcccccchHHHHHHHHHHHHHHHHHHHhHhCeEE
Confidence            999999999988877                  67889999999999999999999999999999999999999999999


Q ss_pred             EEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          139 NSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+||+|+|++.....+..++..++..+..  |++|+++|||
T Consensus       202 N~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~--pl~R~~~ped  242 (294)
T d1w6ua_         202 NVIQPGPIKTKGAFSRLDPTGTFEKEMIGRI--PCGRLGTVEE  242 (294)
T ss_dssp             EEEEECCBCC------CCTTSHHHHHHHTTC--TTSSCBCHHH
T ss_pred             EEEccCccccchhhhccCCcHHHHHHHhhcC--CCCCCCCHHH
Confidence            9999999999998887776777888888887  9999999986

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=4.4e-34  Score=208.01  Aligned_cols=163  Identities=23%  Similarity=0.285  Sum_probs=141.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|++++|+++.+++.        ...++.||+++.  ++.+++  +++++|++|||||....  .++.+++.+
T Consensus        23 ~l~~~Ga~V~~~~r~~~~l~~~--------~~~~~~~Dv~~~--~~~~~~--~~g~iD~lVnnAG~~~~--~~~~~~~~~   88 (234)
T d1o5ia_          23 VLSQEGAEVTICARNEELLKRS--------GHRYVVCDLRKD--LDLLFE--KVKEVDILVLNAGGPKA--GFFDELTNE   88 (234)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHT--------CSEEEECCTTTC--HHHHHH--HSCCCSEEEECCCCCCC--BCGGGCCHH
T ss_pred             HHHHCCCEEEEEECCHHHHHhc--------CCcEEEcchHHH--HHHHHH--HhCCCcEEEecccccCC--cchhhhhhH
Confidence            3789999999999998877643        345678999863  555555  67899999999998776  889999999


Q ss_pred             HHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           81 KVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        81 ~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      +|++.+++|+.                 .|+||+++|..+..+.+....|+++|+|+.+|+|+++.|++++|||||+|+|
T Consensus        89 ~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~P  168 (234)
T d1o5ia_          89 DFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPIENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAP  168 (234)
T ss_dssp             HHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHhcccCeEEeeccc
Confidence            99999999998                 6899999999999999999999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+++|++.....  +++..+.+.+..  |++|+++|||
T Consensus       169 G~v~T~~~~~~~--~~~~~~~~~~~~--pl~R~~~ped  202 (234)
T d1o5ia_         169 GWTETERVKELL--SEEKKKQVESQI--PMRRMAKPEE  202 (234)
T ss_dssp             CSBCCTTHHHHS--CHHHHHHHHTTS--TTSSCBCHHH
T ss_pred             Cccchhhhhhhc--CHHHHHHHHhcC--CCCCCcCHHH
Confidence            999999887765  345556666666  9999999986

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=3.9e-34  Score=211.31  Aligned_cols=177  Identities=21%  Similarity=0.187  Sum_probs=147.0

Q ss_pred             CcccCCCEEEEeec-chHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADV-QDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r-~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++++ +++.++++.+++... .++..+.||++|++++++++++  .++++||++|||||....  .++.+
T Consensus        25 ~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilinnag~~~~--~~~~~  102 (259)
T d1ja9a_          25 ELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGLDFVMSNSGMEVW--CDELE  102 (259)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCEEEEECCCCCCCC--CCGGG
T ss_pred             HHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCCCcEEEeccccccc--ccccc
Confidence            37899999998755 566677777776544 5899999999999999999999  788999999999999877  88999


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|+..+++|+.               .+.+++++|..+. .+.+.+..|+++|+|+.+|+|+|++|++++|||||+
T Consensus       103 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~  182 (259)
T d1ja9a_         103 VTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGIPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNC  182 (259)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSCCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             chHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCCCCchhHHHHHHHHHHHHHHHHHHHhhcCeEEec
Confidence            999999999999998               5677777666554 468899999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC---------ChHH-HHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI---------DKKT-FKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+++|+|.+.....         .++. .+...+..  |++|+++|+|
T Consensus       183 I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--pl~R~g~p~e  231 (259)
T d1ja9a_         183 IAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN--PLKRIGYPAD  231 (259)
T ss_dssp             EEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS--TTSSCBCHHH
T ss_pred             cCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC--CCCCCcCHHH
Confidence            99999999987553211         2233 34444555  9999999975

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-34  Score=211.65  Aligned_cols=152  Identities=18%  Similarity=0.287  Sum_probs=139.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.++++++.+++.+. .++.++.||++|.+++++++++  .++|++|++|||||....  ..+.+.
T Consensus        26 ~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~idilinnag~~~~--~~~~~~  103 (244)
T d1yb1a_          26 EFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVSILVNNAGVVYT--SDLFAT  103 (244)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCSEEEECCCCCCC--CCCGGG
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCceeEeecccccc--cccccc
Confidence            37899999999999999999998887654 6899999999999999999999  788999999999999887  788889


Q ss_pred             CHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC---CCeE
Q 042200           78 DNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ---YDIR  137 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~---~~i~  137 (181)
                      +.+.|++++++|+.                 .|+||++||.++..+.++++.|+++|+|+.+|+++|+.|+++   +||+
T Consensus       104 ~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~  183 (244)
T d1yb1a_         104 QDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVSVPFLLAYCSSKFAAVGFHKTLTDELAALQITGVK  183 (244)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEE
T ss_pred             chhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEE
Confidence            99999999999999                 789999999999999999999999999999999999999865   5899


Q ss_pred             EEEEecCcccCcccchh
Q 042200          138 VNSIAHIVSATPFFCNA  154 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~  154 (181)
                      ||+|+||+|+|+|.++.
T Consensus       184 V~~i~PG~v~T~~~~~~  200 (244)
T d1yb1a_         184 TTCLCPNFVNTGFIKNP  200 (244)
T ss_dssp             EEEEEETHHHHCSTTCT
T ss_pred             EEEEEcCCCCChhhhCc
Confidence            99999999999987654

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=100.00  E-value=4.5e-33  Score=206.89  Aligned_cols=179  Identities=20%  Similarity=0.213  Sum_probs=148.4

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+ ++.++++.+++... .++.++.+|+++++++++++++  .+++++|++|||+|....  .++.+
T Consensus        37 ~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~idilV~nag~~~~--~~~~~  114 (272)
T d1g0oa_          37 ELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLDIVCSNSGVVSF--GHVKD  114 (272)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--CCGGG
T ss_pred             HHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCCCCccccccccchh--hhhhh
Confidence            378999999999887 56677777766544 5899999999999999999999  788999999999998877  88999


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccc-cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATET-IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~-~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      .+.++|++.+++|+.               .|++++++|..+.. +.+....|+++|+|+++|+|+++.|++++|||||+
T Consensus       115 ~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~  194 (272)
T d1g0oa_         115 VTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAVPKHAVYSGSKGAIETFARCMAIDMADKKITVNV  194 (272)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSCSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEE
T ss_pred             hhhhHHHHHhhhccceeeeeccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEE
Confidence            999999999999999               67888888876554 56777889999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCC--------ChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGI--------DKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||+|+|++.+.+...        .++..++.......|++|+++|+|
T Consensus       195 I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~~~pee  243 (272)
T d1g0oa_         195 VAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRRVGLPID  243 (272)
T ss_dssp             EEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCSCBCHHH
T ss_pred             EccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCCCCcCHHH
Confidence            99999999987665432        223333322222339999999986

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9.4e-33  Score=203.84  Aligned_cols=175  Identities=14%  Similarity=0.092  Sum_probs=149.0

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCC---CceEEEeeecCChhHHHHHHHh-c-----ccCCccEEEEcccccCCC-CC
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSD---ELISYVCCNVTIDSDVKNVFDF-T-----KFGKLDIMFNNAGIISNM-DR   72 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~---~~~~~~~~D~~~~~~i~~~~~~-~-----~~~~id~vi~~ag~~~~~-~~   72 (181)
                      .++|++|++++|+.++++++.+++.+.   .++.++.||++++++++++++. .     .++.+|++|||||..... ..
T Consensus        30 ~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~  109 (259)
T d1oaaa_          30 LSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKG  109 (259)
T ss_dssp             BCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSC
T ss_pred             ccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCC
Confidence            358999999999999999988877442   5789999999999999999876 2     245789999999986542 25


Q ss_pred             CcccCCHHHHHHhhheeec-------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           73 TTLDTDNEKVKRVMIMVVF-------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        73 ~~~~~~~~~~~~~~~~n~~-------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      ++.+.+.++|+.++++|+.                   .|+||++||.++..+.+++..|++||+++.+|+++|+.|  .
T Consensus       110 ~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e--~  187 (259)
T d1oaaa_         110 FLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCALQPYKGWGLYCAGKAARDMLYQVLAAE--E  187 (259)
T ss_dssp             GGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGGTSCCTTCHHHHHHHHHHHHHHHHHHHH--C
T ss_pred             ccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccccCCCccchHHHHHHHHHHHHHHHHHhC--C
Confidence            6788899999999999999                   379999999999999999999999999999999999998  5


Q ss_pred             CCeEEEEEecCcccCcccchhc--CCChHHHHHHHHHhhcccccccccCC
Q 042200          134 YDIRVNSIAHIVSATPFFCNAM--GIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +|||||+|+||+|.|+|.+...  ..+++..+.+....  |++|+++|+|
T Consensus       188 ~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~p~e  235 (259)
T d1oaaa_         188 PSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK--SDGALVDCGT  235 (259)
T ss_dssp             TTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH--HTTCSBCHHH
T ss_pred             CCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC--CCCCCCCHHH
Confidence            6999999999999999876653  23566666666666  7899999975

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-33  Score=205.13  Aligned_cols=170  Identities=24%  Similarity=0.293  Sum_probs=145.1

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+++++++..++.    .+....+|+.+.+.++....  .++++|+||||||....  .++.+.+.+.
T Consensus        26 la~~G~~Vi~~~r~~~~l~~~~~~~----~~~~~~~d~~~~~~~~~~~~--~~~~id~lVn~ag~~~~--~~~~~~~~~~   97 (245)
T d2ag5a1          26 FAREGAKVIATDINESKLQELEKYP----GIQTRVLDVTKKKQIDQFAN--EVERLDVLFNVAGFVHH--GTVLDCEEKD   97 (245)
T ss_dssp             HHHTTCEEEEEESCHHHHGGGGGST----TEEEEECCTTCHHHHHHHHH--HCSCCSEEEECCCCCCC--BCGGGCCHHH
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHhcc----CCceeeeecccccccccccc--ccccceeEEecccccCC--CChhhCCHHH
Confidence            7899999999999998887654432    57888999999888877776  56789999999999887  8899999999


Q ss_pred             HHHhhheeec-----------------ceeEEEecccccc-ccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEec
Q 042200           82 VKRVMIMVVF-----------------LGVLLFTANLATE-TIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAH  143 (181)
Q Consensus        82 ~~~~~~~n~~-----------------~~~iv~iss~~~~-~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~P  143 (181)
                      |+..+++|+.                 .|+||+++|..+. .+.+....|+++|+|+++|+|+||.|++++|||||+|+|
T Consensus        98 ~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~P  177 (245)
T d2ag5a1          98 WDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGVVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCP  177 (245)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCCTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEE
T ss_pred             HHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCCccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEee
Confidence            9999999999                 6899999998775 578889999999999999999999999999999999999


Q ss_pred             CcccCcccchhcCC--C-hHHHHHHHHHhhcccccccccCC
Q 042200          144 IVSATPFFCNAMGI--D-KKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       144 g~v~t~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+|+|++.......  . .+..+.+.+..  |++|+++|+|
T Consensus       178 G~i~T~~~~~~~~~~~~~~~~~~~~~~~~--pl~R~~~ped  216 (245)
T d2ag5a1         178 GTVDTPSLQERIQARGNPEEARNDFLKRQ--KTGRFATAEE  216 (245)
T ss_dssp             SCEECHHHHHHHHHSSSHHHHHHHHHHTC--TTSSCEEHHH
T ss_pred             ceeechhhHhhhhhhhhhHHHHHHHHhcC--CCCCCcCHHH
Confidence            99999987664332  2 23445555666  9999999976

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=4.1e-32  Score=202.78  Aligned_cols=153  Identities=17%  Similarity=0.147  Sum_probs=128.1

Q ss_pred             cccCCCEEEEe---ecc---hHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIA---DVQ---DDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~---~r~---~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|+++   .|+   .+.+.+..+++... .++.++.||++|.+++.+++++...+.+|++|||||....  ..+
T Consensus        22 la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~idilvnnag~~~~--~~~   99 (285)
T d1jtva_          22 LASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGRVDVLVCNAGLGLL--GPL   99 (285)
T ss_dssp             HHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSCCSEEEECCCCCCC--SCG
T ss_pred             HHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccchhhhhhccccccc--ccc
Confidence            67889875544   444   34555666666554 6899999999999999999998223789999999999877  888


Q ss_pred             ccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .+.+.++|+..+++|+.                 .|+||++||.++..+.+.+..|++||+|+.+|+++|+.|++++||+
T Consensus       100 ~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~~~~~~Y~asKaal~~l~~~la~El~~~gIr  179 (285)
T d1jtva_         100 EALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVH  179 (285)
T ss_dssp             GGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEE
T ss_pred             cchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCCCCchHHHHHHHHHHHHHHHHHHHhhccCcE
Confidence            99999999999999998                 6999999999999999999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcC
Q 042200          138 VNSIAHIVSATPFFCNAMG  156 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~  156 (181)
                      ||+|+||+|+|+|+.+...
T Consensus       180 Vn~V~PG~v~T~~~~~~~~  198 (285)
T d1jtva_         180 LSLIECGPVHTAFMEKVLG  198 (285)
T ss_dssp             EEEEEECCBCC-------C
T ss_pred             EEEEecCCCCChHHHHhcc
Confidence            9999999999999877654

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.97  E-value=2.3e-32  Score=205.52  Aligned_cols=150  Identities=20%  Similarity=0.252  Sum_probs=134.3

Q ss_pred             CcccCCCEEEEeecc---------hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCC
Q 042200            1 VFIQHRAKVIIADVQ---------DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~---------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~   69 (181)
                      +|+++|++|++++|+         .+.+++..+++..  ......+|+++.+++++++++  .++|+||+||||||+...
T Consensus        26 ~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~  103 (302)
T d1gz6a_          26 AFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR--RGGKAVANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRD  103 (302)
T ss_dssp             HHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH--TTCEEEEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCC
T ss_pred             HHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh--cccccccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCC
Confidence            378999999998664         5567777777665  456678999999999999998  789999999999999887


Q ss_pred             CCCCcccCCHHHHHHhhheeec-----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           70 MDRTTLDTDNEKVKRVMIMVVF-----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        70 ~~~~~~~~~~~~~~~~~~~n~~-----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                        .++.+++.++|+.++++|+.                 .|+||++||.++..+.+++..|++||+++.+|+++|+.|++
T Consensus       104 --~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~E~~  181 (302)
T d1gz6a_         104 --RSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGR  181 (302)
T ss_dssp             --CCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCTTCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred             --CChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence              89999999999999999999                 68999999999999999999999999999999999999999


Q ss_pred             CCCeEEEEEecCcccCcccchh
Q 042200          133 QYDIRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ++|||||+|+||++.|++...+
T Consensus       182 ~~gIrVN~I~PG~~~t~~~~~~  203 (302)
T d1gz6a_         182 KNNIHCNTIAPNAGSRMTETVM  203 (302)
T ss_dssp             GGTEEEEEEEEECCSTTTGGGS
T ss_pred             ccCCceeeeCCCCCCcchhhcC
Confidence            9999999999999988765443

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.5e-31  Score=194.98  Aligned_cols=174  Identities=22%  Similarity=0.264  Sum_probs=144.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC----CCCc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM----DRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~----~~~~   74 (181)
                      +|+++|++|++++|+.+.+++..+++..  ......+|+.+.+.++..+..  ..+..+|.++++++.....    ..++
T Consensus        24 ~la~~G~~V~~~~r~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (248)
T d2o23a1          24 RLVGQGASAVLLDLPNSGGEAQAKKLGN--NCVFAPADVTSEKDVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKG  101 (248)
T ss_dssp             HHHHTTCEEEEEECTTSSHHHHHHHHCT--TEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTT
T ss_pred             HHHHCCCEEEEEeCChHHHHHHHHHhCC--CcccccccccccccccccccccccccccccccccccccccCCCccccccc
Confidence            4789999999999999999999999876  788999999999999888888  5667899999998865431    1455


Q ss_pred             ccCCHHHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHh
Q 042200           75 LDTDNEKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVEL  131 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~  131 (181)
                      .+.+.+.|++++++|+.                       .|+||++||..+..+.+++..|+++|+|+++|+|+|+.|+
T Consensus       102 ~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~e~  181 (248)
T d2o23a1         102 QTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDL  181 (248)
T ss_dssp             EECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhhccCCCCchHHHHHHHHHHHHHHHHHHHh
Confidence            66788999999999987                       4799999999999999999999999999999999999999


Q ss_pred             cCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhccc-ccccccCC
Q 042200          132 GQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLK-GVVLKAAD  181 (181)
Q Consensus       132 ~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e  181 (181)
                      +++|||||+|+||+++|+|...+++   +..+.+.+..  |+ +|+++|||
T Consensus       182 ~~~gIrvN~I~PG~i~T~~~~~~~~---~~~~~~~~~~--pl~~R~g~pee  227 (248)
T d2o23a1         182 APIGIRVMTIAPGLFGTPLLTSLPE---KVCNFLASQV--PFPSRLGDPAE  227 (248)
T ss_dssp             GGGTEEEEEEEECCBCCC-------------CHHHHTC--SSSCSCBCHHH
T ss_pred             cccCcceeeeccCceecchhhcCCH---HHHHHHHhcC--CCCCCCcCHHH
Confidence            9999999999999999999877643   4455555665  65 99999986

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.97  E-value=2.1e-30  Score=189.98  Aligned_cols=165  Identities=15%  Similarity=0.109  Sum_probs=135.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh----cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF----TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~----~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|+.++++++.+......++.++.||++|.++++++++.    .+++++|++|||||..... ..+.+.
T Consensus        25 ~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~-~~~~~~  103 (248)
T d1snya_          25 LPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKS-ARITAV  103 (248)
T ss_dssp             SSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCC-CCGGGC
T ss_pred             HHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcCCcceEEeeccccccC-cccccC
Confidence            46789999999999877766543222225899999999999999999986    3678999999999986652 467788


Q ss_pred             CHHHHHHhhheeec----------------------------ceeEEEecccccccc---CccchhhHhhHHHHHHHHHH
Q 042200           78 DNEKVKRVMIMVVF----------------------------LGVLLFTANLATETI---GEALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        78 ~~~~~~~~~~~n~~----------------------------~~~iv~iss~~~~~~---~~~~~~y~~sK~a~~~l~~~  126 (181)
                      +.++|+.++++|+.                            +|++|+++|..+...   .+++..|++||+|+.+|+++
T Consensus       104 ~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~~~~~~~~Y~aSKaal~~lt~~  183 (248)
T d1snya_         104 RSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNTDGGMYAYRTSKSALNAATKS  183 (248)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCCSCCCHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence            99999999999998                            378999999887653   45677999999999999999


Q ss_pred             HHHHhcCCCeEEEEEecCcccCcccchhcCC-ChHHHHHHHH
Q 042200          127 LCVELGQYDIRVNSIAHIVSATPFFCNAMGI-DKKTFKELLY  167 (181)
Q Consensus       127 la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~-~~~~~~~~~~  167 (181)
                      ++.+++++||+||+|+||+++|+|.....+. .++..+++..
T Consensus       184 la~e~~~~gI~vn~v~PG~v~T~m~~~~~~~~~~~~~~~i~~  225 (248)
T d1snya_         184 LSVDLYPQRIMCVSLHPGWVKTDMGGSSAPLDVPTSTGQIVQ  225 (248)
T ss_dssp             HHHHHGGGTCEEEEECCCSBCSTTTCTTCSBCHHHHHHHHHH
T ss_pred             HHHHhCCCCeEEEEcCCCcccCCcccccCCCCchHHHHHHHH
Confidence            9999999999999999999999998776543 3344444433

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=4.5e-30  Score=189.13  Aligned_cols=177  Identities=14%  Similarity=0.076  Sum_probs=143.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCC---CCccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMD---RTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~---~~~~~   76 (181)
                      |+++|++|++++|+++..+...+..........+.+|+++..++...+..  ..++++|++|||++......   .....
T Consensus        27 l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~  106 (258)
T d1qsga_          27 MHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNA  106 (258)
T ss_dssp             HHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHH
T ss_pred             HHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccccceEEEeeccccccccccccccc
Confidence            68999999999998654443322222224678889999999999999988  77899999999999865410   12234


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      ...+.|...+++|+.               ++.|+++||..+..+.|....|+++|+|+++|+|+++.+++++|||||+|
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~~~~~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I  186 (258)
T d1qsga_         107 VTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAERAIPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAI  186 (258)
T ss_dssp             CCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEE
T ss_pred             chHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhccCCCCcHHHHHHHHHHHHHHHHHHHHhCccCceeecc
Confidence            566778888888877               56799999999999999999999999999999999999999999999999


Q ss_pred             ecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          142 AHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       142 ~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      +||+|.|++...... .....+......  |++|+++|||
T Consensus       187 ~PG~i~T~~~~~~~~-~~~~~~~~~~~~--pl~R~~~pee  223 (258)
T d1qsga_         187 SAGPIRTLAASGIKD-FRKMLAHCEAVT--PIRRTVTIED  223 (258)
T ss_dssp             EECCCCCTTGGGSTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             cccccccccccccch-hhhHHHHHHhCC--CCCCCcCHHH
Confidence            999999999766533 556666777777  9999999986

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.1e-30  Score=194.28  Aligned_cols=160  Identities=14%  Similarity=0.131  Sum_probs=136.9

Q ss_pred             cccC-CCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQH-RAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~-G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++ |++|++++|+.+++++..+++++. .++.++.||++|.+++++++++  .++++||+||||||+...  ....+.
T Consensus        23 la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~iDiLVnNAGi~~~--~~~~~~  100 (275)
T d1wmaa1          23 LCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGLDVLVNNAGIAFK--VADPTP  100 (275)
T ss_dssp             HHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSEEEEEECCCCCCC--TTCCSC
T ss_pred             HHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCCcEEEEEcCCcCCC--CCcccC
Confidence            5665 899999999999999998888654 6789999999999999999999  778999999999999876  777778


Q ss_pred             CHHHHHHhhheeec---------------ceeEEEeccccccccCc----------------------------------
Q 042200           78 DNEKVKRVMIMVVF---------------LGVLLFTANLATETIGE----------------------------------  108 (181)
Q Consensus        78 ~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~----------------------------------  108 (181)
                      +.++|+.++++|++               .|+||+++|..+..+.+                                  
T Consensus       101 ~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~  180 (275)
T d1wmaa1         101 FHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKG  180 (275)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccchhhhhhhcccccchhhhccccccchhccccc
Confidence            88999999999999               78999999987654322                                  


Q ss_pred             -------cchhhHhhHHHHHHHHHHHHHHhcC----CCeEEEEEecCcccCcccchhcCCChHHHH
Q 042200          109 -------ALYDYLMSKYAVLGLMKNLCVELGQ----YDIRVNSIAHIVSATPFFCNAMGIDKKTFK  163 (181)
Q Consensus       109 -------~~~~y~~sK~a~~~l~~~la~~~~~----~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~  163 (181)
                             +...|++||+++.+|++.+++++++    .||+||+|+||+|+|+|.++.....++...
T Consensus       181 ~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~~~~~~pee~A  246 (275)
T d1wmaa1         181 VHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGPKATKSPEEGA  246 (275)
T ss_dssp             CTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCTTCSBCHHHHT
T ss_pred             ccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccCcccCCHHHHH
Confidence                   2346999999999999999998864    589999999999999998876665665443

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=99.96  E-value=6.1e-31  Score=193.37  Aligned_cols=144  Identities=18%  Similarity=0.228  Sum_probs=122.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHh--HcCCCCceEEEeeecC-ChhHHHHHHHh--cccCCccEEEEcccccCCCCCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCK--EFDSDELISYVCCNVT-IDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~--~~~~~~~~~~~~~D~~-~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~   75 (181)
                      +|+++|++|++++|+.++.++..+  .......+.++.+|++ +.++++++++.  .++++||+||||||..        
T Consensus        24 ~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~--------   95 (254)
T d1sbya1          24 ELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLKTVDILINGAGIL--------   95 (254)
T ss_dssp             HHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHSCCCEEEECCCCC--------
T ss_pred             HHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcCCCCEEEeCCCCC--------
Confidence            378999999999887654443322  2222257999999998 66789999998  7789999999999954        


Q ss_pred             cCCHHHHHHhhheeec--------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCC
Q 042200           76 DTDNEKVKRVMIMVVF--------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYD  135 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~--------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~  135 (181)
                        +.++|+.++++|+.                    .|+||++||.++..+.+++..|+++|+|+.+|+++|+.+++++|
T Consensus        96 --~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~~~~~~~Y~asKaal~~~t~~la~el~~~g  173 (254)
T d1sbya1          96 --DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAIHQVPVYSASKAAVVSFTNSLAKLAPITG  173 (254)
T ss_dssp             --CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCCTTSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             --CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccCCCCCHHHHHHHHHHHHHHHHHHhhccccC
Confidence              24568899999998                    48899999999999999999999999999999999999999999


Q ss_pred             eEEEEEecCcccCcccchh
Q 042200          136 IRVNSIAHIVSATPFFCNA  154 (181)
Q Consensus       136 i~v~~i~Pg~v~t~~~~~~  154 (181)
                      ||||+|+||+|+|+|.+.+
T Consensus       174 IrVn~I~PG~v~T~~~~~~  192 (254)
T d1sbya1         174 VTAYSINPGITRTPLVHTF  192 (254)
T ss_dssp             EEEEEEEECSEESHHHHSC
T ss_pred             eEEEEEEeCCCcCcccccc
Confidence            9999999999999987654

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.2e-29  Score=185.07  Aligned_cols=152  Identities=14%  Similarity=0.152  Sum_probs=137.1

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+.++++++.+++...  ..+..+.+|+++.+.+...++.  ..++.+|++|||||....  ..+.+
T Consensus        33 ~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~--~~~~~  110 (269)
T d1xu9a_          33 HLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTS--LNLFH  110 (269)
T ss_dssp             HHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCC--CCCCC
T ss_pred             HHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccc--ccccc
Confidence            37899999999999999999887765332  5788999999999999999888  677899999999999877  78888


Q ss_pred             CCHHHHHHhhheeec----------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEE
Q 042200           77 TDNEKVKRVMIMVVF----------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRV  138 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v  138 (181)
                      .+.++|+..+++|+.                +|+||++||.++..+.|.+..|++||+|+++|+++|+.|++  +.||+|
T Consensus       111 ~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V  190 (269)
T d1xu9a_         111 DDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSI  190 (269)
T ss_dssp             SCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCCTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCCCCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEE
Confidence            999999999999998                78999999999999999999999999999999999999987  467999


Q ss_pred             EEEecCcccCcccchh
Q 042200          139 NSIAHIVSATPFFCNA  154 (181)
Q Consensus       139 ~~i~Pg~v~t~~~~~~  154 (181)
                      |+|+||+|+|+|+.+.
T Consensus       191 ~~v~PG~v~T~~~~~~  206 (269)
T d1xu9a_         191 TLCVLGLIDTETAMKA  206 (269)
T ss_dssp             EEEEECCBCCHHHHHH
T ss_pred             EEEecCcCCCcHHHHh
Confidence            9999999999987543

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=99.96  E-value=1.8e-29  Score=188.16  Aligned_cols=172  Identities=17%  Similarity=0.115  Sum_probs=129.5

Q ss_pred             CcccCCCEEEEeecc-hHHHHHHHhHcCCC--Cc-----------------eEEEeeecCChhHHHHHHHh--cccCCcc
Q 042200            1 VFIQHRAKVIIADVQ-DDLCRALCKEFDSD--EL-----------------ISYVCCNVTIDSDVKNVFDF--TKFGKLD   58 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~-~~~~~~~~~~~~~~--~~-----------------~~~~~~D~~~~~~i~~~~~~--~~~~~id   58 (181)
                      +|+++|++|++++++ .+.+++..+++.+.  ..                 +....+|+++.+++++++++  .++|+||
T Consensus        21 ~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~~~~v~~~~~~~~~~~G~iD  100 (284)
T d1e7wa_          21 GLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCD  100 (284)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCC
T ss_pred             HHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCCHHHHHHHHHHHHHHhCCCC
Confidence            378999999998775 55566555554321  22                 33456679999999999999  7889999


Q ss_pred             EEEEcccccCCCCCCcccCCHHHHH--------------Hhhheeec-----------------------ceeEEEeccc
Q 042200           59 IMFNNAGIISNMDRTTLDTDNEKVK--------------RVMIMVVF-----------------------LGVLLFTANL  101 (181)
Q Consensus        59 ~vi~~ag~~~~~~~~~~~~~~~~~~--------------~~~~~n~~-----------------------~~~iv~iss~  101 (181)
                      +||||||....  .++.+.+.++|+              ..+.+|+.                       .+.|++++|.
T Consensus       101 iLVnnAG~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~s~  178 (284)
T d1e7wa_         101 VLVNNASSFYP--TPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDA  178 (284)
T ss_dssp             EEEECCCCCCC--CCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCT
T ss_pred             EEEecCCccCC--CchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCcccccccc
Confidence            99999999876  666666655544              35566654                       4789999999


Q ss_pred             cccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcc-cccccccC
Q 042200          102 ATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANL-KGVVLKAA  180 (181)
Q Consensus       102 ~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~  180 (181)
                      ....+.+++..|+++|+++.+|+|+|+.|++++|||||+|+||++.+..  .   ..++..+......  | ++|+++||
T Consensus       179 ~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~--~---~~~~~~~~~~~~~--pl~~R~~~pe  251 (284)
T d1e7wa_         179 MTNQPLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--D---MPPAVWEGHRSKV--PLYQRDSSAA  251 (284)
T ss_dssp             TTTSCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--G---SCHHHHHHHHTTC--TTTTSCBCHH
T ss_pred             cccCCccceeeeccccccchhhhHHHHHHhCCccccccccccccccccc--c---CCHHHHHHHHhcC--CCCCCCCCHH
Confidence            9999999999999999999999999999999999999999999865532  2   2556777777776  5 59999998


Q ss_pred             C
Q 042200          181 D  181 (181)
Q Consensus       181 e  181 (181)
                      |
T Consensus       252 e  252 (284)
T d1e7wa_         252 E  252 (284)
T ss_dssp             H
T ss_pred             H
Confidence            6

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=99.95  E-value=1.6e-28  Score=186.73  Aligned_cols=150  Identities=13%  Similarity=0.181  Sum_probs=119.6

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCC---------C----CceEEE--------------------eeecCChhHHHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDS---------D----ELISYV--------------------CCNVTIDSDVKN   47 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~---------~----~~~~~~--------------------~~D~~~~~~i~~   47 (181)
                      +|+++|++|+++++..............         .    ......                    .+|+++.+++++
T Consensus        23 ~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~  102 (329)
T d1uh5a_          23 ELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIED  102 (329)
T ss_dssp             HHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCCCSHHH
T ss_pred             HHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhcccchhhhhhhhhhhhhHHHHHH
Confidence            3789999999999876544333221110         0    112222                    236778888999


Q ss_pred             HHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccccCcc-
Q 042200           48 VFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEA-  109 (181)
Q Consensus        48 ~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~-  109 (181)
                      +++.  ..||+||++|||||.......++.+.+.++|+..+++|++               .|+||++||.++..+.|+ 
T Consensus       103 ~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p~y  182 (329)
T d1uh5a_         103 VANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVPGY  182 (329)
T ss_dssp             HHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTC
T ss_pred             HHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccccccc
Confidence            9988  7889999999999986543367888999999999999986               689999999999888876 


Q ss_pred             chhhHhhHHHHHHHHHHHHHHhcC-CCeEEEEEecCcccCcc
Q 042200          110 LYDYLMSKYAVLGLMKNLCVELGQ-YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       110 ~~~y~~sK~a~~~l~~~la~~~~~-~~i~v~~i~Pg~v~t~~  150 (181)
                      ...|+++|+++++|+|+|+.|+++ +|||||+|+||+|+|++
T Consensus       183 ~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a  224 (329)
T d1uh5a_         183 GGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRA  224 (329)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTT
T ss_pred             chhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchh
Confidence            567899999999999999999986 69999999999999954

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=1.1e-27  Score=175.64  Aligned_cols=155  Identities=15%  Similarity=0.159  Sum_probs=120.1

Q ss_pred             CcccCCC--EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh--cccC--CccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRA--KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF--TKFG--KLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~--~~~~--~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|+  .|++++|+.++++++.+....  ++.++.||+++.++++++++.  ..++  ++|+||||||..... .++
T Consensus        22 ~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~--~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~idilinnAG~~~~~-~~~   98 (250)
T d1yo6a1          22 QLVKDKNIRHIIATARDVEKATELKSIKDS--RVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLSLLINNAGVLLSY-GTN   98 (250)
T ss_dssp             HHHTCTTCCEEEEEESSGGGCHHHHTCCCT--TEEEEECCTTCHHHHHHHHHHHHHHHGGGCCCEEEECCCCCCCB-CTT
T ss_pred             HHHHCCCCCEEEEEeCCHHHHHHHHHhhCC--ceEEEEEecCCHHHHHHHHHHHHHHhCCCCeEEEEEcCcccCCC-Ccc
Confidence            3788896  699999999888876554443  799999999999999999998  4444  499999999986543 567


Q ss_pred             ccCCHHHHHHhhheeec----------------------------ceeEEEecccccccc-------CccchhhHhhHHH
Q 042200           75 LDTDNEKVKRVMIMVVF----------------------------LGVLLFTANLATETI-------GEALYDYLMSKYA  119 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~----------------------------~~~iv~iss~~~~~~-------~~~~~~y~~sK~a  119 (181)
                      .+.+.++|++.+++|+.                            .+.++++++......       ..+..+|++||+|
T Consensus        99 ~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaa  178 (250)
T d1yo6a1          99 TEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTSGSAQFPVLAYRMSKAA  178 (250)
T ss_dssp             SCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceeccccccccccccccCCcccccchhHHHHHHHHHH
Confidence            78889999999999999                            367888887665543       2345679999999


Q ss_pred             HHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCC
Q 042200          120 VLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGID  158 (181)
Q Consensus       120 ~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~  158 (181)
                      +.+|+++|+.+++++||+||+|+||+|+|+|+.......
T Consensus       179 l~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~~~~~~~  217 (250)
T d1yo6a1         179 INMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGKNAALT  217 (250)
T ss_dssp             HHHHHHHHHHHTGGGTCEEEEEECCCC------------
T ss_pred             HHHHHHHHHHHhcccCeEEEEEecCCCCCCCCCCCCCCC
Confidence            999999999999999999999999999999976644333

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=99.95  E-value=1.3e-27  Score=176.69  Aligned_cols=177  Identities=13%  Similarity=0.088  Sum_probs=137.7

Q ss_pred             CcccCCCEEEEeecchHHHHH-HHhHcCCCCceEEEeeecCChhHHHHHHHh-----cccCCccEEEEcccccCC---CC
Q 042200            1 VFIQHRAKVIIADVQDDLCRA-LCKEFDSDELISYVCCNVTIDSDVKNVFDF-----TKFGKLDIMFNNAGIISN---MD   71 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-----~~~~~id~vi~~ag~~~~---~~   71 (181)
                      +|+++|++|++++|+.+++.+ ..+++..  +...+.||+++++++.++++.     ..++++|++|||+|+...   ..
T Consensus        27 ~la~~Ga~Vil~~~~~~~~~~~~~~~~~~--~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~  104 (268)
T d2h7ma1          27 VAQEQGAQLVLTGFDRLRLIQRITDRLPA--KAPLLELDVQNEEHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGI  104 (268)
T ss_dssp             HHHHTTCEEEEEECSCHHHHHHHHTTSSS--CCCEEECCTTCHHHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTT
T ss_pred             HHHHcCCEEEEEeCChHHHHHHHHHHcCC--ceeeEeeecccccccccccchhhhccccCCCcceeeecccccCcccccc
Confidence            378999999999999877644 4444443  677899999999998888777     345789999999997543   11


Q ss_pred             CCcccCCHHHHHHhhheeec--------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           72 RTTLDTDNEKVKRVMIMVVF--------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        72 ~~~~~~~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      .++.+.+.+.|...+..|+.              .+.+++++|.....+.|.+..|+++|+++.+|+|+++.+++++|||
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIr  184 (268)
T d2h7ma1         105 NPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPSRAMPAYNWMTVAKSALESVNRFVAREAGKYGVR  184 (268)
T ss_dssp             SCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCSSCCTTTHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred             ccccccchhhhhhhhhhhhhHHHHHHHHHhhhcccccccccccccccccCcccchhhccccchhhccccchhhhhccCCc
Confidence            45667888999999988887              4556667777778888999999999999999999999999999999


Q ss_pred             EEEEecCcccCcccchhcCC--C-------hHHHHHHHHHhhccccc-ccccCC
Q 042200          138 VNSIAHIVSATPFFCNAMGI--D-------KKTFKELLYASANLKGV-VLKAAD  181 (181)
Q Consensus       138 v~~i~Pg~v~t~~~~~~~~~--~-------~~~~~~~~~~~~~~~~~-~~~~~e  181 (181)
                      ||+|+||++.|+++......  .       +...+...+..  |++| +++|+|
T Consensus       185 VN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--pl~rr~~~p~d  236 (268)
T d2h7ma1         185 SNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRA--PIGWNMKDATP  236 (268)
T ss_dssp             EEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHC--TTCCCTTCCHH
T ss_pred             ceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcC--CCCCCCCCHHH
Confidence            99999999999988765432  1       11122222333  7665 999975

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=99.95  E-value=8.8e-28  Score=178.22  Aligned_cols=177  Identities=14%  Similarity=0.152  Sum_probs=133.2

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh--cccCCccEEEEcccccCCC--CCCcc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF--TKFGKLDIMFNNAGIISNM--DRTTL   75 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~--~~~~~id~vi~~ag~~~~~--~~~~~   75 (181)
                      +|+++|++|++++|+++..+ .++++... ....++.+|+++.+++.+++++  ..++++|++|||+|.....  ...+.
T Consensus        26 ~la~~Ga~V~i~~r~~~~~~-~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~  104 (274)
T d2pd4a1          26 SCFNQGATLAFTYLNESLEK-RVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLL  104 (274)
T ss_dssp             HHHTTTCEEEEEESSTTTHH-HHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGG
T ss_pred             HHHHCCCEEEEEeCCHHHHH-HHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCCCeEEeecccccccccccccc
Confidence            37899999999999854222 22322221 3577899999999999999988  7789999999999986551  12233


Q ss_pred             cCCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEE
Q 042200           76 DTDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNS  140 (181)
Q Consensus        76 ~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~  140 (181)
                      ....+.+...+..+..               .+.|+++++.+...+.+....|+++|+++.+|+|+++.+++++|||||+
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~  184 (274)
T d2pd4a1         105 ETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGSTKYMAHYNVMGLAKAALESAVRYLAVDLGKHHIRVNA  184 (274)
T ss_dssp             GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSBCTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE
T ss_pred             cccchhhhhhhccccccccccccccccccccCcceeeecccccccccccchhhhHHHHHHHHHHHhhHHHhcCcCceecc
Confidence            3444445555444444               4557777777777778888999999999999999999999999999999


Q ss_pred             EecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          141 IAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       141 i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |+||.+.|++.....+ .++..+......  |++|+++|+|
T Consensus       185 I~PG~v~T~~~~~~~~-~~~~~~~~~~~~--p~~r~~~ped  222 (274)
T d2pd4a1         185 LSAGPIRTLASSGIAD-FRMILKWNEINA--PLRKNVSLEE  222 (274)
T ss_dssp             EEECCCCCTTGGGSTT-HHHHHHHHHHHS--TTSSCCCHHH
T ss_pred             cccCcccCccccccCc-hHHHHHHHhhhh--hccCCcCHHH
Confidence            9999999998766543 344444444555  8999999986

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=99.94  E-value=4.3e-27  Score=173.59  Aligned_cols=172  Identities=20%  Similarity=0.199  Sum_probs=129.0

Q ss_pred             CcccCCCEEEEeecchH-HHHHHHhHcCCC--CceEEEeeecCC----hhHHHHHHHh--cccCCccEEEEcccccCCCC
Q 042200            1 VFIQHRAKVIIADVQDD-LCRALCKEFDSD--ELISYVCCNVTI----DSDVKNVFDF--TKFGKLDIMFNNAGIISNMD   71 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-~~~~~~~~~~~~--~~~~~~~~D~~~----~~~i~~~~~~--~~~~~id~vi~~ag~~~~~~   71 (181)
                      +|+++|++|++++|+.+ ..+++.+++...  .+.....+|..+    .+.+.++++.  +++|++|++|||||+...  
T Consensus        20 ~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iDilvnnAG~~~~--   97 (266)
T d1mxha_          20 RLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAFGRCDVLVNNASAYYP--   97 (266)
T ss_dssp             HHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHHSCCCEEEECCCCCCC--
T ss_pred             HHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHhCCCCEEEECCccCCC--
Confidence            37899999999999854 445555555332  466666666654    5566777776  778999999999998765  


Q ss_pred             CCccc-----------CCHHHHHHhhheeec----------------------ceeEEEeccccccccCccchhhHhhHH
Q 042200           72 RTTLD-----------TDNEKVKRVMIMVVF----------------------LGVLLFTANLATETIGEALYDYLMSKY  118 (181)
Q Consensus        72 ~~~~~-----------~~~~~~~~~~~~n~~----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~  118 (181)
                      ..+.+           .....+...+..|+.                      .+.++.+++..+..+.+++..|++||+
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~asKa  177 (266)
T d1mxha_          98 TPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLPGFCVYTMAKH  177 (266)
T ss_dssp             CCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCTTCHHHHHHHH
T ss_pred             CcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhccccccCcchhhhhhhHH
Confidence            33221           122334444444444                      568889999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccc-cccCC
Q 042200          119 AVLGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVV-LKAAD  181 (181)
Q Consensus       119 a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~e  181 (181)
                      ++++|+|+++.+++++|||||+|+||+++|++..     .++..+++.+.+  |++|. ++|||
T Consensus       178 al~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~-----~~~~~~~~~~~~--pl~r~~~~pee  234 (266)
T d1mxha_         178 ALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAM-----PQETQEEYRRKV--PLGQSEASAAQ  234 (266)
T ss_dssp             HHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSS-----CHHHHHHHHTTC--TTTSCCBCHHH
T ss_pred             HHhhhHHHHHHHhCccCcEEEEeccCcEeccccC-----CHHHHHHHHhcC--CCCCCCCCHHH
Confidence            9999999999999999999999999999998532     446666667666  88664 89976

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=99.94  E-value=2.2e-27  Score=172.78  Aligned_cols=166  Identities=21%  Similarity=0.187  Sum_probs=134.0

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCC--CCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNM--DRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~--~~~~~~~   77 (181)
                      +|+++|++|++++|+++.           .+.....+|+++......+... ......+.++++++.....  .......
T Consensus        20 ~la~~Ga~V~i~~~~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (241)
T d1uaya_          20 ALKARGYRVVVLDLRREG-----------EDLIYVEGDVTREEDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPH   88 (241)
T ss_dssp             HHHHHTCEEEEEESSCCS-----------SSSEEEECCTTCHHHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBC
T ss_pred             HHHHCCCEEEEEECCccc-----------ccceEeeccccchhhhHHHHHhhhccccccchhhhhhccccccccccccch
Confidence            378999999999998542           2566789999999999888887 4344566777777754331  1334456


Q ss_pred             CHHHHHHhhheeec-----------------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCC
Q 042200           78 DNEKVKRVMIMVVF-----------------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQY  134 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-----------------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~  134 (181)
                      +.+.|+..+++|+.                       .|+||++||..+..+.+++..|+++|+|+.+|+|+|+.|++++
T Consensus        89 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~~~~~Y~asKaal~~lt~~lA~ela~~  168 (241)
T d1uaya_          89 GLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQIGQAAYAASKGGVVALTLPAARELAGW  168 (241)
T ss_dssp             CHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCTTCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred             hHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCCCchhhHHHHHHHHHHHHHHHHHHhhc
Confidence            77889999998887                       5899999999999999999999999999999999999999999


Q ss_pred             CeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          135 DIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       135 ~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      |||||+|+||+|+|++....   .++..+++..+.+ +++|+++|||
T Consensus       169 gIrVN~V~PG~i~T~~~~~~---~~~~~~~~~~~~~-~~~R~g~ped  211 (241)
T d1uaya_         169 GIRVVTVAPGLFDTPLLQGL---PEKAKASLAAQVP-FPPRLGRPEE  211 (241)
T ss_dssp             TEEEEEEEECSCSSHHHHTS---CHHHHHHHHTTCC-SSCSCCCHHH
T ss_pred             CCceeeecCCcccccccchh---hhhHHHHHHhcCC-CCCCCcCHHH
Confidence            99999999999999987665   4455556665552 4599999986

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=99.94  E-value=7.5e-27  Score=174.93  Aligned_cols=178  Identities=15%  Similarity=0.069  Sum_probs=132.3

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCC-------------CceEEEeee--------------------cCChhHHHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSD-------------ELISYVCCN--------------------VTIDSDVKN   47 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~D--------------------~~~~~~i~~   47 (181)
                      +|+++|++|++++|+..............             ..-....+|                    .++..++++
T Consensus        29 ~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~  108 (297)
T d1d7oa_          29 SLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPEDVPEDVKANKRYAGSSNWTVQE  108 (297)
T ss_dssp             HHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGGGSCHHHHTSHHHHHCCCCSHHH
T ss_pred             HHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhccccccchhhhhhhhhhhhccHHHHHH
Confidence            37899999999999865443322211100             011222232                    345556677


Q ss_pred             HHHh--cccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec---------------ceeEEEeccccccc-cCcc
Q 042200           48 VFDF--TKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF---------------LGVLLFTANLATET-IGEA  109 (181)
Q Consensus        48 ~~~~--~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~-~~~~  109 (181)
                      ++++  .+||+||++|||||.......++.+.+.++|++.+++|+.               .+.++.+++.+... ..+.
T Consensus       109 ~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  188 (297)
T d1d7oa_         109 AAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIPGY  188 (297)
T ss_dssp             HHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCTTC
T ss_pred             HHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccccc
Confidence            8777  7789999999999986543367888999999999999998               55666666655543 4467


Q ss_pred             chhhHhhHHHHHHHHHHHHHHhc-CCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          110 LYDYLMSKYAVLGLMKNLCVELG-QYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       110 ~~~y~~sK~a~~~l~~~la~~~~-~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ...|+++|+++.++++.++.+++ ++|||||+|+||++.|++...... .++..+...+..  |++|+++|||
T Consensus       189 ~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~--PlgR~~~pee  258 (297)
T d1d7oa_         189 GGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGF-IDTMIEYSYNNA--PIQKTLTADE  258 (297)
T ss_dssp             TTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSH-HHHHHHHHHHHS--SSCCCBCHHH
T ss_pred             ccceecccccccccccccchhccccceEEecccccccccchhhhhccC-CHHHHHHHHhCC--CCCCCCCHHH
Confidence            77899999999999999999996 689999999999999998765432 445666667776  9999999986

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.93  E-value=4e-27  Score=171.23  Aligned_cols=146  Identities=16%  Similarity=0.061  Sum_probs=119.4

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh----cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF----TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~----~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++++....         ......+.+|.++.++.+.+...    ...+++|+||||||..... ..+.+
T Consensus        21 ~l~~~G~~V~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~lInnAG~~~~~-~~~~~   90 (236)
T d1dhra_          21 AFRARNWWVASIDVVENEE---------ASASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAILCVAGGWAGG-NAKSK   90 (236)
T ss_dssp             HHHTTTCEEEEEESSCCTT---------SSEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCB-CTTCT
T ss_pred             HHHHCCCEEEEEeCCcccc---------ccccceeecccCcHHHHHHHHHHHHHHhCCCCceEEEECCcccccc-cchhc
Confidence            3789999999998865321         12455667788887777766666    2235799999999975541 44556


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v~  139 (181)
                      .+.+.|+..+++|+.               .|+||++||.++..+.+.+..|++||+|+.+|+++|+.|++  ++||+||
T Consensus        91 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn  170 (236)
T d1dhra_          91 SLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAI  170 (236)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEE
T ss_pred             CCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCccCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEE
Confidence            677889999999988               78999999999999999999999999999999999999998  5799999


Q ss_pred             EEecCcccCcccchhcC
Q 042200          140 SIAHIVSATPFFCNAMG  156 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~  156 (181)
                      +|+||+++|+|.+...+
T Consensus       171 ~v~PG~v~T~~~~~~~~  187 (236)
T d1dhra_         171 AVLPVTLDTPMNRKSMP  187 (236)
T ss_dssp             EEEESCEECHHHHHHST
T ss_pred             EEEeccCcCCcchhhCc
Confidence            99999999999766543

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=99.93  E-value=1e-26  Score=168.91  Aligned_cols=146  Identities=18%  Similarity=0.120  Sum_probs=118.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh----cccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF----TKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~----~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|++++|+++...         .....+.+|+.+.++.....+.    .++++||+||||||..... ..+.+
T Consensus        21 ~l~~~G~~V~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~linnAG~~~~~-~~~~~   90 (235)
T d1ooea_          21 FFKKNGYTVLNIDLSANDQA---------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGVFCVAGGWAGG-SASSK   90 (235)
T ss_dssp             HHHHTTEEEEEEESSCCTTS---------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEEECCCCCCCB-CTTST
T ss_pred             HHHHCCCEEEEEECCchhcc---------cccceeccccCchhHHHHHHHHHHHHhcCCCeeEEEECCcccccc-ccccc
Confidence            37899999999999864211         1344566777776666555544    4568999999999986542 34455


Q ss_pred             CCHHHHHHhhheeec---------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhc--CCCeEEE
Q 042200           77 TDNEKVKRVMIMVVF---------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELG--QYDIRVN  139 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~---------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~--~~~i~v~  139 (181)
                      .+.+.|+.++++|+.               .|+||++||..+..+.+++..|+++|+|+.+|+++|+.|++  +.+|+||
T Consensus        91 ~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~  170 (235)
T d1ooea_          91 DFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVL  170 (235)
T ss_dssp             THHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEE
T ss_pred             CcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcccccchHHHHHHHHHHHHHHHHHhccCCCceEEE
Confidence            566889999999998               78999999999999999999999999999999999999998  4799999


Q ss_pred             EEecCcccCcccchhcC
Q 042200          140 SIAHIVSATPFFCNAMG  156 (181)
Q Consensus       140 ~i~Pg~v~t~~~~~~~~  156 (181)
                      +|+||+++|++.+...+
T Consensus       171 ~i~Pg~~~T~~~~~~~~  187 (235)
T d1ooea_         171 TIMPVTLDTPMNRKWMP  187 (235)
T ss_dssp             EEEESCBCCHHHHHHST
T ss_pred             EEecCcCcCcchhhhCc
Confidence            99999999998776543

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=99.89  E-value=4.5e-25  Score=161.91  Aligned_cols=162  Identities=14%  Similarity=0.084  Sum_probs=96.5

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh---cccCCccEEEEcccccCCCCCCcccC
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF---TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~---~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      +|+++|++|++++|+.++                ..+|+++.+........   ...+.+|++|||||..... ..+...
T Consensus        20 ~la~~Ga~V~~~~~~~~~----------------~~~d~~~~~~~~~~~~~~~~~~~~~id~lv~~Ag~~~~~-~~~~~~   82 (257)
T d1fjha_          20 VLEAAGHQIVGIDIRDAE----------------VIADLSTAEGRKQAIADVLAKCSKGMDGLVLCAGLGPQT-KVLGNV   82 (257)
T ss_dssp             HHHHTTCEEEEEESSSSS----------------EECCTTSHHHHHHHHHHHHTTCTTCCSEEEECCCCCTTC-SSHHHH
T ss_pred             HHHHCCCEEEEEECChHH----------------HHHHhcCHHHHHHHHHHHHHHhCCCCcEEEEcCCCCCcH-HHHHHH
Confidence            378999999999986431                35688888888777655   3446799999999976441 111110


Q ss_pred             C---H--------HHHHHhhheee--------c-----------------ceeEEEeccccccccC-ccchhhHhhHHHH
Q 042200           78 D---N--------EKVKRVMIMVV--------F-----------------LGVLLFTANLATETIG-EALYDYLMSKYAV  120 (181)
Q Consensus        78 ~---~--------~~~~~~~~~n~--------~-----------------~~~iv~iss~~~~~~~-~~~~~y~~sK~a~  120 (181)
                      .   .        ..+....+.+.        .                 .|.+++++|..+..+. ++..+|++||+|+
T Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal  162 (257)
T d1fjha_          83 VSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARAIVEHAGEQGGNLAYAGSKNAL  162 (257)
T ss_dssp             HHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhhhccCCcEEEEeeehhccCCCcchHHHHHHhhhh
Confidence            0   0        00000000000        0                 3456666665554433 3455799999999


Q ss_pred             HHHHHHHHHHhcCCCeEEEEEecCcccCcccchhcCCChHHHHHHHHHhhcccccccccCC
Q 042200          121 LGLMKNLCVELGQYDIRVNSIAHIVSATPFFCNAMGIDKKTFKELLYASANLKGVVLKAAD  181 (181)
Q Consensus       121 ~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e  181 (181)
                      ++|+|+|+.|++++|||||+|+||+++|++++.... +++..+.+.+.. .|++|+++|+|
T Consensus       163 ~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~~~~-~PlgR~g~p~e  221 (257)
T d1fjha_         163 TVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQ-DPRYGESIAKFV-PPMGRRAEPSE  221 (257)
T ss_dssp             HHHHHHTHHHHHHTTCEEEEEEECC----------------------CC-CSTTSCCCTHH
T ss_pred             hccccccccccccccccccccccCCcCChhHHhhcC-CHHHHHHHHhcC-CCCCCCcCHHH
Confidence            999999999999999999999999999999877654 444445544442 38999999986

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.88  E-value=3.7e-23  Score=151.97  Aligned_cols=143  Identities=16%  Similarity=0.178  Sum_probs=120.9

Q ss_pred             CcccCCC-EEEEeecch---HHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRA-KVIIADVQD---DLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~-~Vv~~~r~~---~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|+++|+ +|++++|+.   +..++..+++... .++.++.||++|.++++++++. .+.+++|+||||+|....  ..+
T Consensus        28 ~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~i~~vv~~ag~~~~--~~~  105 (259)
T d2fr1a1          28 WLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVPLSAVFHAAATLDD--GTV  105 (259)
T ss_dssp             HHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSCEEEEEECCCCCCC--CCG
T ss_pred             HHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccccccccccccccccccccc--ccc
Confidence            3688998 589999863   4455555555433 5899999999999999999999 666789999999999887  889


Q ss_pred             ccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEE
Q 042200           75 LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSI  141 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i  141 (181)
                      .+.+.++|+.++++|+.             .++||++||.++..+.+++..|+++|+++++|++.++    ..|+++++|
T Consensus       106 ~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~~~~~~YaAaka~l~~la~~~~----~~Gi~v~~I  181 (259)
T d2fr1a1         106 DTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGAPGLGGYAPGNAYLDGLAQQRR----SDGLPATAV  181 (259)
T ss_dssp             GGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCCTTCTTTHHHHHHHHHHHHHHH----HTTCCCEEE
T ss_pred             ccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCCcccHHHHHHHHhHHHHHHHHH----hCCCCEEEC
Confidence            99999999999999998             6789999999999999999999999999998876654    458999999


Q ss_pred             ecCcccCc
Q 042200          142 AHIVSATP  149 (181)
Q Consensus       142 ~Pg~v~t~  149 (181)
                      +||.+.++
T Consensus       182 ~pg~~~~~  189 (259)
T d2fr1a1         182 AWGTWAGS  189 (259)
T ss_dssp             EECCBC--
T ss_pred             CCCcccCC
Confidence            99988654

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=99.34  E-value=2.3e-12  Score=97.73  Aligned_cols=138  Identities=7%  Similarity=-0.020  Sum_probs=92.9

Q ss_pred             CcccCCCEEEEeecchH-----HHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQDD-----LCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|++.|++|++++|...     +.+......... .++.++.+|++|.+++.++++.   ..+|+|||+|+....  ...
T Consensus        20 ~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~v~h~aa~~~~--~~~   94 (357)
T d1db3a_          20 FLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILRE---VQPDEVYNLGAMSHV--AVS   94 (357)
T ss_dssp             HHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHH---HCCSEEEECCCCCTT--TTT
T ss_pred             HHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhc---cCCCEEEEeeccccc--chh
Confidence            36789999999999543     222222211111 5799999999999999999985   347999999998664  221


Q ss_pred             ccCCHHHHHHhhheeec----------------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF----------------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~l  127 (181)
                      .    ++....+++|+.                ..++|++||...+-.           ..+...|+.+|.+.+.+++.+
T Consensus        95 ~----~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~~~~P~~~Y~~sK~~~E~~~~~~  170 (357)
T d1db3a_          95 F----ESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNY  170 (357)
T ss_dssp             T----SCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             h----hCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence            1    112222333332                246999998653311           124568999999999999999


Q ss_pred             HHHhcCCCeEEEEEecCcccCcc
Q 042200          128 CVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +..+   ++.+..++|+.+..|.
T Consensus       171 ~~~~---~l~~~ilR~~~vyGp~  190 (357)
T d1db3a_         171 RESY---GMYACNGILFNHESPR  190 (357)
T ss_dssp             HHHH---CCCEEEEEECCEECTT
T ss_pred             HHHh---CCCEEEEEeccccCCC
Confidence            9887   7999999999998875

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=99.25  E-value=3.4e-12  Score=88.70  Aligned_cols=113  Identities=7%  Similarity=-0.024  Sum_probs=80.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+.+++++..+++.....+....+|+++.+++++++.     ++|+||||||...      ..++.+.
T Consensus        43 la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~-----~iDilin~Ag~g~------~~~~~e~  111 (191)
T d1luaa1          43 LAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVK-----GAHFVFTAGAIGL------ELLPQAA  111 (191)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTT-----TCSEEEECCCTTC------CCBCHHH
T ss_pred             HHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhc-----CcCeeeecCcccc------ccCCHHH
Confidence            7899999999999999998887777543345678899999999988876     4899999999643      2478899


Q ss_pred             HHHhhheeec----------------ceeEEEeccccccccC-ccchhhHhhHHHHHHHHH
Q 042200           82 VKRVMIMVVF----------------LGVLLFTANLATETIG-EALYDYLMSKYAVLGLMK  125 (181)
Q Consensus        82 ~~~~~~~n~~----------------~~~iv~iss~~~~~~~-~~~~~y~~sK~a~~~l~~  125 (181)
                      |+..+++|+.                ......+++...+... .+...|+++|+++..+++
T Consensus       112 ~~~~~~~nv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~y~~sk~a~~~l~~  172 (191)
T d1luaa1         112 WQNESSIEIVADYNAQPPLGIGGIDATDKGKEYGGKRAFGALGIGGLKLKLHRACIAKLFE  172 (191)
T ss_dssp             HHTCTTCCEEEECCCSSSCSBTTCCTTCEEEEETTEEEECHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHhhhcceeehhHhhHHHHHHHhhhhccCcEEecceEEEeccCcCcHHHHHHHHHHHHHHh
Confidence            9999998876                1111122221111110 123469999998877664

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=99.20  E-value=8.2e-11  Score=88.28  Aligned_cols=136  Identities=13%  Similarity=0.107  Sum_probs=94.6

Q ss_pred             cccCCCEEEEeecch----HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRAKVIIADVQD----DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~----~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|++|++++|..    ..... .+.+.. .++.++++|++|.+.+.++++.   .++|+|||+|+....  +    .
T Consensus        20 L~~~g~~V~~~d~~~~~~~~~~~~-~~~~~~-~~~~~~~~Dl~d~~~l~~~~~~---~~~d~ViHlAa~~~~--~----~   88 (338)
T d1udca_          20 LLQNGHDVIILDNLCNSKRSVLPV-IERLGG-KHPTFVEGDIRNEALMTEILHD---HAIDTVIHFAGLKAV--G----E   88 (338)
T ss_dssp             HHHTTCEEEEEECCSSCCTTHHHH-HHHHHT-SCCEEEECCTTCHHHHHHHHHH---TTCSEEEECCSCCCH--H----H
T ss_pred             HHHCcCEEEEEECCCCcchhhHHH-HHhhcC-CCCEEEEeecCCHHHHHHHHhc---cCCCEEEECCCccch--h----h
Confidence            678999999998732    22222 122211 3788999999999999999985   458999999996432  1    1


Q ss_pred             CHHHHHHhhheeec-------------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHHHhc
Q 042200           78 DNEKVKRVMIMVVF-------------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCVELG  132 (181)
Q Consensus        78 ~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~~~~  132 (181)
                      +.++....+++|+.             -.++|++||...+.+.            .+...|+.+|.+.+.+++.....+.
T Consensus        89 ~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~  168 (338)
T d1udca_          89 SVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQP  168 (338)
T ss_dssp             HHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHHHST
T ss_pred             HHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcchHHHHHhhhhHHHHHHHhhcc
Confidence            12223344444444             3578888886654321            2466799999999999988777654


Q ss_pred             CCCeEEEEEecCcccCcc
Q 042200          133 QYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       133 ~~~i~v~~i~Pg~v~t~~  150 (181)
                        ++.+..++|+.+.++.
T Consensus       169 --~~~~~ilR~~~v~G~~  184 (338)
T d1udca_         169 --DWSIALLRYFNPVGAH  184 (338)
T ss_dssp             --TCEEEEEEECEEECCC
T ss_pred             --CCeEEEEeeccEEecc
Confidence              6888899999888764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.15  E-value=2.2e-10  Score=87.54  Aligned_cols=139  Identities=13%  Similarity=-0.050  Sum_probs=93.3

Q ss_pred             CcccCCCEEEEeecchH--------------------HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEE
Q 042200            1 VFIQHRAKVIIADVQDD--------------------LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIM   60 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~--------------------~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~v   60 (181)
                      +|++.|++|+++|....                    ..........  .++.++.+|++|.+.+..+++.   .++|+|
T Consensus        20 ~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~~~Dl~d~~~l~~~~~~---~~~d~V   94 (393)
T d1i24a_          20 HLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG--KSIELYVGDICDFEFLAESFKS---FEPDSV   94 (393)
T ss_dssp             HHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC--CCCEEEESCTTSHHHHHHHHHH---HCCSEE
T ss_pred             HHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcC--CCcEEEEccCCCHHHHHHHHHh---hcchhe
Confidence            37789999999973211                    1111111112  3689999999999999999985   258999


Q ss_pred             EEcccccCCCCCCcccCCHHHHHHhhheeec--------------ceeEEEecccccccc--------------------
Q 042200           61 FNNAGIISNMDRTTLDTDNEKVKRVMIMVVF--------------LGVLLFTANLATETI--------------------  106 (181)
Q Consensus        61 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~--------------~~~iv~iss~~~~~~--------------------  106 (181)
                      ||.||....   .......+.....++.|+.              ...+++.||......                    
T Consensus        95 iHlAa~~~~---~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~  171 (393)
T d1i24a_          95 VHFGEQRSA---PYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDT  171 (393)
T ss_dssp             EECCSCCCH---HHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGGCCCSSCBCSSEEEEEETTEEEE
T ss_pred             ecccccccc---ccccccccccccccccccccccHHHHHHHHhccccceeeccccccccccccccccccccccccccccc
Confidence            999997542   2222333434444444444              245666666543311                    


Q ss_pred             ----CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          107 ----GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       107 ----~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                          ..+...|+.+|.+.+.+++.++.++   ++++..++|+.+..+.
T Consensus       172 ~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~---~l~~~~lR~~~v~G~~  216 (393)
T d1i24a_         172 LPYPKQASSFYHLSKVHDSHNIAFTCKAW---GIRATDLNQGVVYGVK  216 (393)
T ss_dssp             EECCCCCCSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECSC
T ss_pred             cccccccccHHHHHhhhhccccccccccc---ceeeeecccccccCCC
Confidence                1233469999999999999888887   7999999999888764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=6.7e-10  Score=83.44  Aligned_cols=138  Identities=14%  Similarity=0.112  Sum_probs=92.0

Q ss_pred             CcccCCCEEEEeecc----hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            1 VFIQHRAKVIIADVQ----DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      +|+++|++|+++++.    .+...........  ++.++.+|++|.++++.++..   .++|+|||+|+....  ... .
T Consensus        20 ~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~--~v~~~~~Dl~d~~~l~~~~~~---~~~d~VihlAa~~~~--~~~-~   91 (347)
T d1z45a2          20 ELIENGYDCVVADNLSNSTYDSVARLEVLTKH--HIPFYEVDLCDRKGLEKVFKE---YKIDSVIHFAGLKAV--GES-T   91 (347)
T ss_dssp             HHHHTTCEEEEEECCSSCCTHHHHHHHHHHTS--CCCEEECCTTCHHHHHHHHHH---SCCCEEEECCSCCCH--HHH-H
T ss_pred             HHHHCcCeEEEEECCCCcchhHHHhHHhhccc--CCeEEEeecCCHHHHHHHHhc---cCCCEEEEccccccc--ccc-c
Confidence            377899999999762    2222222222222  688999999999999999985   358999999997643  111 1


Q ss_pred             CCHHHHHHhhheeec-------------ceeEEEecccccccc---------------CccchhhHhhHHHHHHHHHHHH
Q 042200           77 TDNEKVKRVMIMVVF-------------LGVLLFTANLATETI---------------GEALYDYLMSKYAVLGLMKNLC  128 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~---------------~~~~~~y~~sK~a~~~l~~~la  128 (181)
                      ..   ......+|+.             ..++|++||...+..               ..+...|+.+|.+.+.+++.+.
T Consensus        92 ~~---~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~  168 (347)
T d1z45a2          92 QI---PLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLGPTNPYGHTKYAIENILNDLY  168 (347)
T ss_dssp             HS---HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred             cC---cccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCCCCChhHhHHHHHHHHHHHHH
Confidence            11   1222333332             357999998665421               1245679999999999998887


Q ss_pred             HHhcCCCeEEEEEecCcccCcc
Q 042200          129 VELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       129 ~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .... .++.+..++|+.+..+.
T Consensus       169 ~~~~-~~~~~~~lR~~~v~g~~  189 (347)
T d1z45a2         169 NSDK-KSWKFAILRYFNPIGAH  189 (347)
T ss_dssp             HHST-TSCEEEEEEECEEECCC
T ss_pred             Hhhc-cCCcEEEEeecceEeec
Confidence            6543 37888888887776543

>d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=99.06  E-value=1e-10  Score=88.61  Aligned_cols=137  Identities=7%  Similarity=0.000  Sum_probs=92.7

Q ss_pred             cccCCCEEE-EeecchHHH-HHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRAKVI-IADVQDDLC-RALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~~Vv-~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |++.|+.|+ ++++..... ......+....++.++.+|++|.+++.++++.   ..+|+|||+|+....  ......+ 
T Consensus        20 L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~VihlAa~~~~--~~~~~~p-   93 (361)
T d1kewa_          20 IIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQ---YQPDAVMHLAAESHV--DRSITGP-   93 (361)
T ss_dssp             HHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--HHHHHCT-
T ss_pred             HHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHh---CCCCEEEECccccch--hhHHhCH-
Confidence            678898754 444422111 11123333335799999999999999999985   258999999997543  2211122 


Q ss_pred             HHHHHhhheeec----------------------ceeEEEecccccccc---------------------CccchhhHhh
Q 042200           80 EKVKRVMIMVVF----------------------LGVLLFTANLATETI---------------------GEALYDYLMS  116 (181)
Q Consensus        80 ~~~~~~~~~n~~----------------------~~~iv~iss~~~~~~---------------------~~~~~~y~~s  116 (181)
                         ...+++|+.                      ..++|++||...+-.                     ..+...|+.+
T Consensus        94 ---~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~e~~~~~p~s~Yg~s  170 (361)
T d1kewa_          94 ---AAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSAS  170 (361)
T ss_dssp             ---HHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBCTTSCCCCCSHHHHH
T ss_pred             ---HHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcccCCCCCCCCHHHHH
Confidence               223343332                      237999999765421                     1134569999


Q ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          117 KYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       117 K~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      |.+.+.+++.++..+   |+.+..++|+.+..|.
T Consensus       171 K~~~E~~~~~~~~~~---~i~~~~lR~~~vyGp~  201 (361)
T d1kewa_         171 KASSDHLVRAWRRTY---GLPTIVTNCSNNYGPY  201 (361)
T ss_dssp             HHHHHHHHHHHHHHH---CCCEEEEEECEEESTT
T ss_pred             HHHHHHHHHHHHHHh---CCCEEEEecCceECcC
Confidence            999999999999887   7999999999998874

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=5.7e-10  Score=83.58  Aligned_cols=137  Identities=7%  Similarity=-0.082  Sum_probs=90.6

Q ss_pred             cccCCCEEEEeecchH-----HHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQDD-----LCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|+.++|...     .++.........  .++.++.+|++|.+.+.+++..   ..+++++|+++....  .  
T Consensus        21 Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~~~v~~~~a~~~~--~--   93 (347)
T d1t2aa_          21 LLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINE---VKPTEIYNLGAQSHV--K--   93 (347)
T ss_dssp             HHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--H--
T ss_pred             HHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhh---cccceeeeeeecccc--c--
Confidence            6789999999999532     111111111111  3789999999999999999986   346889999986543  1  


Q ss_pred             ccCCHHHHHHhhheeec----------------ceeEEEecccccccc-----------CccchhhHhhHHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF----------------LGVLLFTANLATETI-----------GEALYDYLMSKYAVLGLMKNL  127 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~----------------~~~iv~iss~~~~~~-----------~~~~~~y~~sK~a~~~l~~~l  127 (181)
                        ...+.....+++|+.                ..++|++||.+.+..           ..+...|+.+|.+.+.++..+
T Consensus        94 --~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~P~~~Yg~sK~~aE~~~~~~  171 (347)
T d1t2aa_          94 --ISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNF  171 (347)
T ss_dssp             --HHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred             --hhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence              111112222333322                247899888654311           124567999999999999998


Q ss_pred             HHHhcCCCeEEEEEecCcccCcc
Q 042200          128 CVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       128 a~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +..+   ++.+..++|+.+..|.
T Consensus       172 ~~~~---~~~~~ilr~~~vyGp~  191 (347)
T d1t2aa_         172 REAY---NLFAVNGILFNHESPR  191 (347)
T ss_dssp             HHHH---CCEEEEEEECCEECTT
T ss_pred             HHHh---CCCEEEEEecceeCCC
Confidence            8876   7899999998888763

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.98  E-value=6.4e-10  Score=82.99  Aligned_cols=141  Identities=11%  Similarity=-0.015  Sum_probs=90.4

Q ss_pred             cccCCCEEEEeecchH-----HHHHHHhHcCC--CCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            2 FIQHRAKVIIADVQDD-----LCRALCKEFDS--DELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~--~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      |+++|++|+.++|...     +..........  ...+.++.+|+++.+++.+.++.   .++|+|||+|+....  ...
T Consensus        21 Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~---~~~D~Vih~Aa~~~~--~~~   95 (339)
T d1n7ha_          21 LLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDV---IKPDEVYNLAAQSHV--AVS   95 (339)
T ss_dssp             HHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--HHH
T ss_pred             HHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhh---hccchhhhccccccc--ccc
Confidence            6789999999998432     21111111100  14788999999999999999985   358999999997543  111


Q ss_pred             ccCCHHHHHHhhhee--ec------------ceeEEEecccccccc----------CccchhhHhhHHHHHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMV--VF------------LGVLLFTANLATETI----------GEALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n--~~------------~~~iv~iss~~~~~~----------~~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      .+.+.+.++..+...  +.            ..++++.||......          ..+...|+.+|.+.+.+++.++..
T Consensus        96 ~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  175 (339)
T d1n7ha_          96 FEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREA  175 (339)
T ss_dssp             HHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             ccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCCCCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence            122222222221111  11            224555554332211          125668999999999999998887


Q ss_pred             hcCCCeEEEEEecCcccCcc
Q 042200          131 LGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      +   ++.+..++|+.+..|.
T Consensus       176 ~---~~~~~ilR~~~vyGp~  192 (339)
T d1n7ha_         176 Y---GLFACNGILFNHESPR  192 (339)
T ss_dssp             H---CCEEEEEEECCEECTT
T ss_pred             h---CCCEEEEEEccccCCC
Confidence            7   7999999999998875

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=98.94  E-value=9e-10  Score=82.63  Aligned_cols=138  Identities=14%  Similarity=0.126  Sum_probs=92.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHc---CCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEF---DSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|++|+.+.|+..+........   ........+..|+++.+++..++.     ..|+++|+++....  .    .+
T Consensus        31 Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~-----~~~~v~~~a~~~~~--~----~~   99 (342)
T d1y1pa1          31 LLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIK-----GAAGVAHIASVVSF--S----NK   99 (342)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTT-----TCSEEEECCCCCSC--C----SC
T ss_pred             HHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcc-----cchhhhhhcccccc--c----cc
Confidence            6789999999999876655443221   111345567889999988777666     47999999997543  1    12


Q ss_pred             HHH-HHHhh--heeec--------ceeEEEecccccccc-------------------------------CccchhhHhh
Q 042200           79 NEK-VKRVM--IMVVF--------LGVLLFTANLATETI-------------------------------GEALYDYLMS  116 (181)
Q Consensus        79 ~~~-~~~~~--~~n~~--------~~~iv~iss~~~~~~-------------------------------~~~~~~y~~s  116 (181)
                      ... ++..+  ..|++        ..++|++||..+...                               ..+...|+.+
T Consensus       100 ~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~e~~~~~p~~~Y~~s  179 (342)
T d1y1pa1         100 YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAAS  179 (342)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSCTTSTTHHHHHHHHH
T ss_pred             ccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCccccccccccccccccccccccCCCCCcCcccch
Confidence            211 12111  12222        358899998654321                               1133469999


Q ss_pred             HHHHHHHHHHHHHHhcCCCeEEEEEecCcccCccc
Q 042200          117 KYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPFF  151 (181)
Q Consensus       117 K~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~~  151 (181)
                      |.+.+.++..++..+.. ++++.+++|+.+..|..
T Consensus       180 K~~~E~~~~~~~~~~~~-~~~~~~i~p~~v~Gp~~  213 (342)
T d1y1pa1         180 KTEAELAAWKFMDENKP-HFTLNAVLPNYTIGTIF  213 (342)
T ss_dssp             HHHHHHHHHHHHHHHCC-SSEEEEEEESEEECCCS
T ss_pred             hHhHHHHHHHhhhhccc-ccccceecccceeCCCC
Confidence            99999999999888754 68899999998887744

>d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Trypanosoma brucei [TaxId: 5691]

Probab=98.84  E-value=2.2e-08  Score=75.86  Aligned_cols=114  Identities=11%  Similarity=0.119  Sum_probs=78.5

Q ss_pred             CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhh--heeec-------ceeEEEecc
Q 042200           30 ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVM--IMVVF-------LGVLLFTAN  100 (181)
Q Consensus        30 ~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~--~~n~~-------~~~iv~iss  100 (181)
                      ..+.++.+|++|.+.++++++.  ..++|+|||+|+....  ..........++..+  ..|++       ...++++++
T Consensus        69 ~~~~~~~~Di~d~~~l~~~~~~--~~~~d~ViH~Aa~~~~--~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s  144 (383)
T d1gy8a_          69 RYAALEVGDVRNEDFLNGVFTR--HGPIDAVVHMCAFLAV--GESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSS  144 (383)
T ss_dssp             CCCEEEESCTTCHHHHHHHHHH--SCCCCEEEECCCCCCH--HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             cceEEEECcccCHHHhhhhhhc--cceeehhhcccccccc--cccccccccccccccccccccchhhhccCCcccccccc
Confidence            4688999999999999999985  4468999999997654  222222222222222  11111       345666665


Q ss_pred             cccccc------------------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          101 LATETI------------------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       101 ~~~~~~------------------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ......                  ..+...|+.+|.+.+.+++.+...+   |+.+..++|+.+..+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~---gl~~~~lR~~~vyG~~  209 (383)
T d1gy8a_         145 AAIFGNPTMGSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAY---GIKGICLRYFNACGAH  209 (383)
T ss_dssp             GGGTBSCCC-----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHH---CCEEEEEEECEEECCC
T ss_pred             cccccccccccccccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHh---CCCEEEEecceeeccC
Confidence            443321                  1246779999999999999998887   7999999999888764

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=98.81  E-value=8.8e-09  Score=76.38  Aligned_cols=135  Identities=13%  Similarity=0.005  Sum_probs=84.4

Q ss_pred             CcccCCCEEEEeecch-HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            1 VFIQHRAKVIIADVQD-DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      +|+++|++|+++++.. .........+....++.++.+|+++.+++.++++.   .++|+|||+|+....  .    ...
T Consensus        19 ~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~~~~~~i~~Di~~~~~l~~~~~~---~~~d~Vih~aa~~~~--~----~~~   89 (338)
T d1orra_          19 FALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRLITK---YMPDSCFHLAGQVAM--T----TSI   89 (338)
T ss_dssp             HHHHTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH---HCCSEEEECCCCCCH--H----HHH
T ss_pred             HHHHCcCEEEEEECCCcccchhHHHHhhccCCcEEEEcccCCHHHHHHHHHh---cCCceEEeecccccc--c----ccc
Confidence            3678999999987521 11111222222224789999999999999999985   358999999997643  1    111


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccC----------------------------ccchhhHhhHH
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIG----------------------------EALYDYLMSKY  118 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~----------------------------~~~~~y~~sK~  118 (181)
                      ++....+++|+.             ..+.+++||.....+.                            .+...|+.+|.
T Consensus        90 ~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~k~  169 (338)
T d1orra_          90 DNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKG  169 (338)
T ss_dssp             HCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEETTCTTCBCTTSCCCCCHHHHHHHH
T ss_pred             cChHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccCcccCCccccccccccccc
Confidence            222333333333             3345555555443321                            14567999999


Q ss_pred             HHHHHHHHHHHHhcCCCeEEEEEecCccc
Q 042200          119 AVLGLMKNLCVELGQYDIRVNSIAHIVSA  147 (181)
Q Consensus       119 a~~~l~~~la~~~~~~~i~v~~i~Pg~v~  147 (181)
                      ..+.+.......+   ++....+.|..+.
T Consensus       170 ~~e~~~~~~~~~~---~~~~~~~~~~~~~  195 (338)
T d1orra_         170 AADQYMLDYARIF---GLNTVVFRHSSMY  195 (338)
T ss_dssp             HHHHHHHHHHHHH---CCEEEEEEECCEE
T ss_pred             hhhhhhhhhhhcc---Cccccccccccee
Confidence            9999999888888   4455555544333

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=7.5e-09  Score=72.05  Aligned_cols=129  Identities=8%  Similarity=-0.004  Sum_probs=83.7

Q ss_pred             CcccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            1 VFIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      +|+++|++|.++.|+.+++...    .. ..+.++.+|++|.+++.++++     +.|+|||++|....  ........+
T Consensus        22 ~Ll~~g~~V~~~~R~~~~~~~~----~~-~~~~~~~gD~~d~~~l~~al~-----~~d~vi~~~g~~~~--~~~~~~~~~   89 (205)
T d1hdoa_          22 QAVQAGYEVTVLVRDSSRLPSE----GP-RPAHVVVGDVLQAADVDKTVA-----GQDAVIVLLGTRND--LSPTTVMSE   89 (205)
T ss_dssp             HHHHTTCEEEEEESCGGGSCSS----SC-CCSEEEESCTTSHHHHHHHHT-----TCSEEEECCCCTTC--CSCCCHHHH
T ss_pred             HHHHCcCEEEEEEcChhhcccc----cc-cccccccccccchhhHHHHhc-----CCCEEEEEeccCCc--hhhhhhhHH
Confidence            3778999999999997764321    11 368899999999999988887     36999999997654  322223333


Q ss_pred             HHHHhhheeec--ceeEEEeccccccccCc----cchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           81 KVKRVMIMVVF--LGVLLFTANLATETIGE----ALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        81 ~~~~~~~~n~~--~~~iv~iss~~~~~~~~----~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ...+.++.--.  -.++|++||.......+    ....|...|...+.+.+       ..|++...|+|+.+..
T Consensus        90 ~~~~l~~aa~~~~v~r~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~e~~l~-------~~~~~~tiirp~~~~~  156 (205)
T d1hdoa_          90 GARNIVAAMKAHGVDKVVACTSAFLLWDPTKVPPRLQAVTDDHIRMHKVLR-------ESGLKYVAVMPPHIGD  156 (205)
T ss_dssp             HHHHHHHHHHHHTCCEEEEECCGGGTSCTTCSCGGGHHHHHHHHHHHHHHH-------HTCSEEEEECCSEEEC
T ss_pred             HHHHHHHHHHhcCCCeEEEEeeeeccCCCccccccccccchHHHHHHHHHH-------hcCCceEEEecceecC
Confidence            33333322111  35899998865543322    22245555555554432       3589999999987753

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=4.3e-09  Score=77.90  Aligned_cols=130  Identities=10%  Similarity=0.006  Sum_probs=80.9

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|......+.........++.....|+.     +.++     .++|+|||+|+....  ......    
T Consensus        21 L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~~-----~~~~-----~~~d~VihlAa~~~~--~~~~~~----   84 (312)
T d2b69a1          21 LMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV-----EPLY-----IEVDQIYHLASPASP--PNYMYN----   84 (312)
T ss_dssp             HHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTT-----SCCC-----CCCSEEEECCSCCSH--HHHTTC----
T ss_pred             HHHCcCEEEEEeCCCcCCHHHHHHhcCCCceEEEehHHH-----HHHH-----cCCCEEEECcccCCc--hhHHhC----
Confidence            678899999998743211111222221123444433332     2222     358999999997543  211111    


Q ss_pred             HHHhhheeec------------ceeEEEecccccccc----------------CccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           82 VKRVMIMVVF------------LGVLLFTANLATETI----------------GEALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        82 ~~~~~~~n~~------------~~~iv~iss~~~~~~----------------~~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      ....+++|+.            ..++|++||...+..                ..+...|+.+|.+.+.+++.++..+  
T Consensus        85 ~~~~~~~Nv~g~~~ll~~~~~~~~k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~--  162 (312)
T d2b69a1          85 PIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQE--  162 (312)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEGGGGBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHHHHHHHHcCCcEEEEEChheecCCCCCCCCccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHh--
Confidence            2233333333            457999988654421                1245679999999999999999888  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       |+.+..++|+.+..|.
T Consensus       163 -~~~~~~lR~~~vyGp~  178 (312)
T d2b69a1         163 -GVEVRVARIFNTFGPR  178 (312)
T ss_dssp             -CCCEEEEEECCEECTT
T ss_pred             -CCcEEEEEeeeEECCC
Confidence             7999999999999874

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.81  E-value=5.6e-09  Score=77.21  Aligned_cols=140  Identities=9%  Similarity=-0.050  Sum_probs=91.4

Q ss_pred             cccCCCEEEEeecchHHH-HHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRAKVIIADVQDDLC-RALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~-~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|++|+.++|..... ...++.+....++.++.+|++|.+++.+.+..   ...++++|+|+....  ......+.+
T Consensus        20 Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~~~~~~~a~~~~~--~~~~~~~~~   94 (321)
T d1rpna_          20 LLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIK---AQPQEVYNLAAQSFV--GASWNQPVT   94 (321)
T ss_dssp             HHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--HHHTTSHHH
T ss_pred             HHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcc---ccccccccccccccc--cccccchHH
Confidence            678999999999864321 12233333324789999999999999998886   335788888876543  111111222


Q ss_pred             HHHHhh--heeec--------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEE
Q 042200           81 KVKRVM--IMVVF--------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        81 ~~~~~~--~~n~~--------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v  138 (181)
                      .+...+  ..|+.        ..++++.|+ ....+.            .+...|+.+|.+.+.+++.++..+   ++++
T Consensus        95 ~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss-~~~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~  170 (321)
T d1rpna_          95 TGVVDGLGVTHLLEAIRQFSPETRFYQAST-SEMFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESF---GLHA  170 (321)
T ss_dssp             HHHHHTHHHHHHHHHHHHHCTTSEEEEEEE-GGGGCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCE
T ss_pred             HHhhhhhchHHHHHHHHHhCCCcccccccc-hhhcCcccCCCCCCCCCccccChhHHHHHHHHHHHHHHHhhc---CCcE
Confidence            222211  12222        335555555 333321            256789999999999999998887   6899


Q ss_pred             EEEecCcccCcc
Q 042200          139 NSIAHIVSATPF  150 (181)
Q Consensus       139 ~~i~Pg~v~t~~  150 (181)
                      ..++|+.+..|.
T Consensus       171 ~~lr~~~vyGp~  182 (321)
T d1rpna_         171 SSGILFNHESPL  182 (321)
T ss_dssp             EEEEECCEECTT
T ss_pred             EEEEEecccCCC
Confidence            999999888775

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=98.78  E-value=1.9e-08  Score=75.10  Aligned_cols=136  Identities=10%  Similarity=0.022  Sum_probs=92.4

Q ss_pred             CcccCCCEEEEeecc----hHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc
Q 042200            1 VFIQHRAKVIIADVQ----DDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT   74 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~----~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~   74 (181)
                      +|.++|++|++++|.    ..............  ..+.++.+|..|.........     ..+.++|.++....  .  
T Consensus        35 ~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~~~v~~~~a~~~~--~--  105 (341)
T d1sb8a_          35 TLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-----GVDYVLHQAALGSV--P--  105 (341)
T ss_dssp             HHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-----TCSEEEECCSCCCH--H--
T ss_pred             HHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeeccccccccccccc-----cccccccccccccc--c--
Confidence            367899999999872    22232222221111  478999999999887665554     46888999886543  1  


Q ss_pred             ccCCHHHHHHhhheeec-------------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHH
Q 042200           75 LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        75 ~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                        .+.++....+++|+.             ..++|++||...+...           .+...|+.+|.+.+.+++.++..
T Consensus       106 --~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~  183 (341)
T d1sb8a_         106 --RSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRC  183 (341)
T ss_dssp             --HHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred             --ccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCcchHHHHHHHHHHHHHHHH
Confidence              122333334444444             3489999987654321           24578999999999999999887


Q ss_pred             hcCCCeEEEEEecCcccCcc
Q 042200          131 LGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .   ++++..++|+.+.++.
T Consensus       184 ~---~i~~~ilR~~~v~G~~  200 (341)
T d1sb8a_         184 Y---GFSTIGLRYFNVFGRR  200 (341)
T ss_dssp             H---CCCCEEEEECCEECTT
T ss_pred             h---CCCeEEEEeceeeccC
Confidence            7   7899999999888764

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=98.75  E-value=6.6e-09  Score=77.58  Aligned_cols=134  Identities=12%  Similarity=0.079  Sum_probs=89.8

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |+++|+ +|+++++........    ....++.++.+|+++.+++.+.+..    ++|+|||+|+....  ....    +
T Consensus        20 Ll~~g~~~V~~ld~~~~~~~~~----~~~~~~~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~~~~~--~~~~----~   85 (342)
T d2blla1          20 LLREDHYEVYGLDIGSDAISRF----LNHPHFHFVEGDISIHSEWIEYHVK----KCDVVLPLVAIATP--IEYT----R   85 (342)
T ss_dssp             HHHSTTCEEEEEESCCGGGGGG----TTCTTEEEEECCTTTCSHHHHHHHH----HCSEEEECBCCCCH--HHHH----H
T ss_pred             HHHCCCCEEEEEeCCCcchhhh----ccCCCeEEEECccCChHHHHHHHHh----CCCccccccccccc--cccc----c
Confidence            667884 799998865433222    2224799999999998777664442    48999999997654  1111    2


Q ss_pred             HHHHhhheeec------------ceeEEEeccccccccC------------------ccchhhHhhHHHHHHHHHHHHHH
Q 042200           81 KVKRVMIMVVF------------LGVLLFTANLATETIG------------------EALYDYLMSKYAVLGLMKNLCVE  130 (181)
Q Consensus        81 ~~~~~~~~n~~------------~~~iv~iss~~~~~~~------------------~~~~~y~~sK~a~~~l~~~la~~  130 (181)
                      +....+..|+.            ..+++++||...+...                  .+...|+.+|.+.+.+++.++..
T Consensus        86 ~~~~~~~~nv~gt~~ll~~~~~~~~~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~  165 (342)
T d2blla1          86 NPLRVFELDFEENLRIIRYCVKYRKRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQLLDRVIWAYGEK  165 (342)
T ss_dssp             SHHHHHHHHTHHHHHHHHHHHHTTCEEEEECCGGGGBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCccccccccccccccccccccccccccccccccccccccccccccccccccccccCCCcchhhhcccchhhhhhhhhcc
Confidence            12233333333            3456666665543321                  13457999999999999999988


Q ss_pred             hcCCCeEEEEEecCcccCcccc
Q 042200          131 LGQYDIRVNSIAHIVSATPFFC  152 (181)
Q Consensus       131 ~~~~~i~v~~i~Pg~v~t~~~~  152 (181)
                      +   |+.+..++|+.+..+...
T Consensus       166 ~---~~~~~i~r~~~~~g~~~~  184 (342)
T d2blla1         166 E---GLQFTLFRPFNWMGPRLD  184 (342)
T ss_dssp             H---CCCEEEEEECSEECSSCC
T ss_pred             c---CceeEEeecccccccccc
Confidence            8   789999999888877433

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=4.9e-08  Score=72.88  Aligned_cols=141  Identities=9%  Similarity=0.137  Sum_probs=90.7

Q ss_pred             CcccCCCEEEEeecc----------hHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCC
Q 042200            1 VFIQHRAKVIIADVQ----------DDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNM   70 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~----------~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~   70 (181)
                      +|+++|+.|+++++.          ....+.. ..+.. .++.++.+|++|.+++.+++..   ..++.++|+||.... 
T Consensus        21 ~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~Dl~d~~~l~~~~~~---~~~~~i~h~Aa~~~~-   94 (346)
T d1ek6a_          21 ELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-QELTG-RSVEFEEMDILDQGALQRLFKK---YSFMAVIHFAGLKAV-   94 (346)
T ss_dssp             HHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-HHHHT-CCCEEEECCTTCHHHHHHHHHH---CCEEEEEECCSCCCH-
T ss_pred             HHHHCcCEEEEEECCCccccccccchHHHHHH-HHhcC-CCcEEEEeeccccccccccccc---cccccccccccccCc-
Confidence            367899999998741          2233322 22221 3789999999999999998885   457899999997643 


Q ss_pred             CCCcccCCHHHHHHhhh--eeec-------ceeEEEeccccccccC------------ccchhhHhhHHHHHHHHHHHHH
Q 042200           71 DRTTLDTDNEKVKRVMI--MVVF-------LGVLLFTANLATETIG------------EALYDYLMSKYAVLGLMKNLCV  129 (181)
Q Consensus        71 ~~~~~~~~~~~~~~~~~--~n~~-------~~~iv~iss~~~~~~~------------~~~~~y~~sK~a~~~l~~~la~  129 (181)
                       ......+.+.++..+.  .|+.       -.+++++||.......            .+...|+.+|.+.+..++.++.
T Consensus        95 -~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~~~~~~~Y~~~k~~~e~~~~~~~~  173 (346)
T d1ek6a_          95 -GESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQ  173 (346)
T ss_dssp             -HHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred             -HhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccccccCChHHHHHHHHHHHHHHHHH
Confidence             2111122222322221  1122       3468888776544321            2455799999999988887765


Q ss_pred             HhcCCCeEEEEEecCcccCcc
Q 042200          130 ELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       130 ~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ..  .++....++|+.+.++.
T Consensus       174 ~~--~~~~~~~lR~~~v~G~~  192 (346)
T d1ek6a_         174 AD--KTWNAVLLRYFNPTGAH  192 (346)
T ss_dssp             HC--TTCEEEEEEECEEECCC
T ss_pred             hc--cCCceEEEeecceeccC
Confidence            43  37888889998777653

>d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptococcus suis, serotype 2 [TaxId: 1307]

Probab=98.71  E-value=5.6e-09  Score=78.25  Aligned_cols=134  Identities=10%  Similarity=0.010  Sum_probs=87.7

Q ss_pred             cccCCCEEEEeecch---HHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            2 FIQHRAKVIIADVQD---DLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~---~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      |+++|+.|.+++++.   .........+.. .++.++.+|++|.+.+..++..     .+.++|.|+....  ......+
T Consensus        22 L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~-~~i~~~~~Di~d~~~~~~~~~~-----~~~v~~~a~~~~~--~~~~~~~   93 (346)
T d1oc2a_          22 VYNNHPDVHVTVLDKLTYAGNKANLEAILG-DRVELVVGDIADAELVDKLAAK-----ADAIVHYAAESHN--DNSLNDP   93 (346)
T ss_dssp             HHHHCTTCEEEEEECCCTTCCGGGTGGGCS-SSEEEEECCTTCHHHHHHHHTT-----CSEEEECCSCCCH--HHHHHCC
T ss_pred             HHHCCCCeEEEEEeCCCccccHHHHHHhhc-CCeEEEEccCCCHHHHHHHHhh-----hhhhhhhhhcccc--cchhhCc
Confidence            567787655554431   111111122221 4789999999999999888873     5779999987643  2111122


Q ss_pred             HHHHHHhhheeec------------ceeEEEeccccccccC-----------------------ccchhhHhhHHHHHHH
Q 042200           79 NEKVKRVMIMVVF------------LGVLLFTANLATETIG-----------------------EALYDYLMSKYAVLGL  123 (181)
Q Consensus        79 ~~~~~~~~~~n~~------------~~~iv~iss~~~~~~~-----------------------~~~~~y~~sK~a~~~l  123 (181)
                      .    ..+++|+.            ..++|++||...+...                       .+...|+.+|.+.+.+
T Consensus        94 ~----~~~~~N~~g~~nll~~~~~~~~k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~~e~~~~~p~s~Y~~sK~~~E~~  169 (346)
T d1oc2a_          94 S----PFIHTNFIGTYTLLEAARKYDIRFHHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLI  169 (346)
T ss_dssp             H----HHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGGCCBCCGGGSTTTTCSTTSSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred             c----cceeeehHhHHhhhhhhccccccccccccceEecccCccccccccccCcccccccCCCCCCCCHHHHHHHHHHHH
Confidence            2    33333443            5577877776544211                       1345799999999999


Q ss_pred             HHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          124 MKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       124 ~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ++.+..++   |+++..++|+.+..|.
T Consensus       170 ~~~~~~~~---~i~~~ilR~~~vyGp~  193 (346)
T d1oc2a_         170 VKAWVRSF---GVKATISNCSNNYGPY  193 (346)
T ss_dssp             HHHHHHHH---CCEEEEEEECCEESTT
T ss_pred             HHHHHHHc---CCCEEEEeecceeCCC
Confidence            99998887   8999999999998864

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=98.71  E-value=2.8e-08  Score=74.30  Aligned_cols=139  Identities=9%  Similarity=-0.081  Sum_probs=93.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |+++|++|++++|+..+.............+.++.+|++|.+++.+++..   ..+|+++|+|+....  .    .+.+.
T Consensus        28 Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~---~~~~~v~~~aa~~~~--~----~~~~~   98 (356)
T d1rkxa_          28 LQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIRE---FQPEIVFHMAAQPLV--R----LSYSE   98 (356)
T ss_dssp             HHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHH---HCCSEEEECCSCCCH--H----HHHHC
T ss_pred             HHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhh---chhhhhhhhhccccc--c----ccccC
Confidence            77899999999997654443333332223699999999999999998885   457999999996543  1    12222


Q ss_pred             HHHhhheeec--------------ceeEEEecccccccc------------CccchhhHhhHHHHHHHHHHHHHHhc---
Q 042200           82 VKRVMIMVVF--------------LGVLLFTANLATETI------------GEALYDYLMSKYAVLGLMKNLCVELG---  132 (181)
Q Consensus        82 ~~~~~~~n~~--------------~~~iv~iss~~~~~~------------~~~~~~y~~sK~a~~~l~~~la~~~~---  132 (181)
                      ....+++|+.              ...++..|+......            ..+...|+.+|.+.+.+.+.++.++.   
T Consensus        99 ~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~e~~~~~~~~~~~~~~  178 (356)
T d1rkxa_          99 PVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCAELVTSSYRNSFFNPA  178 (356)
T ss_dssp             HHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHHHHHHHHHHHHHSCGG
T ss_pred             CccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCCCCccccccccchhhhhHHhhhcccch
Confidence            3334444433              234444444332221            12456799999999999988887654   


Q ss_pred             ---CCCeEEEEEecCcccCc
Q 042200          133 ---QYDIRVNSIAHIVSATP  149 (181)
Q Consensus       133 ---~~~i~v~~i~Pg~v~t~  149 (181)
                         ..++.+..++|+.+..|
T Consensus       179 ~~~~~~~~~~~~r~~~vyGp  198 (356)
T d1rkxa_         179 NYGQHGTAVATVRAGNVIGG  198 (356)
T ss_dssp             GHHHHCCEEEEEECCCEECT
T ss_pred             hccccCceEEeccCCCeeCC
Confidence               34788999999887765

>d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase)
species: Escherichia coli [TaxId: 562]

Probab=98.67  E-value=3.1e-08  Score=72.91  Aligned_cols=135  Identities=15%  Similarity=0.141  Sum_probs=85.7

Q ss_pred             EEEEeecchHHHHHHHhHcCCCCceEE-----EeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH-HH
Q 042200            8 KVIIADVQDDLCRALCKEFDSDELISY-----VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN-EK   81 (181)
Q Consensus         8 ~Vv~~~r~~~~~~~~~~~~~~~~~~~~-----~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~-~~   81 (181)
                      +|++++-+---+..+++.|.+.+....     -.+|+.+.+.+..+++.   ..+|.++|+|+....  ........ +.
T Consensus         4 kIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~~~~~~~~~~~~~~~~---~~~d~v~~~a~~~~~--~~~~~~~~~~~   78 (315)
T d1e6ua_           4 RVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFAS---ERIDQVYLAAAKVGG--IVANNTYPADF   78 (315)
T ss_dssp             EEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTTCCTTCHHHHHHHHHH---HCCSEEEECCCCCCC--HHHHHHCHHHH
T ss_pred             EEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchhccccCHHHHHHHHhh---cCCCEEEEcchhccc--cccchhhHHHH
Confidence            355555554444445554443211111     14688899999888885   358999999987543  22111222 22


Q ss_pred             HHHhhh--eeec-------ceeEEEeccccccccC----------------ccchhhHhhHHHHHHHHHHHHHHhcCCCe
Q 042200           82 VKRVMI--MVVF-------LGVLLFTANLATETIG----------------EALYDYLMSKYAVLGLMKNLCVELGQYDI  136 (181)
Q Consensus        82 ~~~~~~--~n~~-------~~~iv~iss~~~~~~~----------------~~~~~y~~sK~a~~~l~~~la~~~~~~~i  136 (181)
                      ++..+.  .|+.       -.++|++||.+.+.+.                ++...|+.+|.+.+.+++.+..+.   |+
T Consensus        79 ~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~---gl  155 (315)
T d1e6ua_          79 IYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQY---GR  155 (315)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHHHHHHHHHHHHHH---CC
T ss_pred             HHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CC
Confidence            232222  1222       3579999997754321                223469999999999999998888   79


Q ss_pred             EEEEEecCcccCcc
Q 042200          137 RVNSIAHIVSATPF  150 (181)
Q Consensus       137 ~v~~i~Pg~v~t~~  150 (181)
                      ++..++|+.+..|.
T Consensus       156 ~~~ilR~~~vyGp~  169 (315)
T d1e6ua_         156 DYRSVMPTNLYGPH  169 (315)
T ss_dssp             EEEEEEECEEESTT
T ss_pred             CEEEEeeccEECCC
Confidence            99999999998874

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.67  E-value=3.8e-08  Score=73.97  Aligned_cols=134  Identities=12%  Similarity=0.102  Sum_probs=89.2

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH-H
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN-E   80 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~-~   80 (181)
                      |+++|++|+++++......  ...+   ....+..+|+.+.+++.++++     ++|+|||+|+....  ........ +
T Consensus        35 L~~~g~~V~~~d~~~~~~~--~~~~---~~~~~~~~D~~~~~~~~~~~~-----~~d~Vih~a~~~~~--~~~~~~~~~~  102 (363)
T d2c5aa1          35 LKHEGHYVIASDWKKNEHM--TEDM---FCDEFHLVDLRVMENCLKVTE-----GVDHVFNLAADMGG--MGFIQSNHSV  102 (363)
T ss_dssp             HHHTTCEEEEEESSCCSSS--CGGG---TCSEEEECCTTSHHHHHHHHT-----TCSEEEECCCCCCC--HHHHTTCHHH
T ss_pred             HHHCcCEEEEEeCCCccch--hhhc---ccCcEEEeechhHHHHHHHhh-----cCCeEeeccccccc--cccccccccc
Confidence            6789999999987432110  1111   246678889999888877665     47999999987654  22111221 1


Q ss_pred             HHHHhh--heeec-------ceeEEEeccccccccC------------------ccchhhHhhHHHHHHHHHHHHHHhcC
Q 042200           81 KVKRVM--IMVVF-------LGVLLFTANLATETIG------------------EALYDYLMSKYAVLGLMKNLCVELGQ  133 (181)
Q Consensus        81 ~~~~~~--~~n~~-------~~~iv~iss~~~~~~~------------------~~~~~y~~sK~a~~~l~~~la~~~~~  133 (181)
                      .+...+  ..|+.       ..++|++||.......                  .+...|+.+|.+.+.+++.+..++  
T Consensus       103 ~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~sK~~~E~~~~~~~~~~--  180 (363)
T d2c5aa1         103 IMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDF--  180 (363)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGSSBCCSSHHHHHHHHHHHHHHHHHHHH--
T ss_pred             ccccccchhhHHHHhHHhhCccccccccccccccccccccccccccccccCCcCCCCCHHHHHHHHHHHHHHHHHHHh--
Confidence            111111  12222       3579999996654311                  235579999999999999998887  


Q ss_pred             CCeEEEEEecCcccCcc
Q 042200          134 YDIRVNSIAHIVSATPF  150 (181)
Q Consensus       134 ~~i~v~~i~Pg~v~t~~  150 (181)
                       |+++..++|+.+..+.
T Consensus       181 -gl~~~ilR~~~vyG~~  196 (363)
T d2c5aa1         181 -GIECRIGRFHNIYGPF  196 (363)
T ss_dssp             -CCEEEEEEECCEECTT
T ss_pred             -CCCEEEEEeeeEeccC
Confidence             7999999999998764

>d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-glucose 4,6-dehydratase (RmlB)
species: Streptomyces venezuelae [TaxId: 54571]

Probab=98.56  E-value=2.2e-08  Score=74.14  Aligned_cols=111  Identities=9%  Similarity=0.033  Sum_probs=78.8

Q ss_pred             CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhh--eeec-------ceeEEEecc
Q 042200           30 ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMI--MVVF-------LGVLLFTAN  100 (181)
Q Consensus        30 ~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~--~n~~-------~~~iv~iss  100 (181)
                      .++.++..|.++.........     .+|.|+|+|+....  ........+.++..+.  .|+.       ..++|++||
T Consensus        55 ~~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a~~~~~--~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss  127 (322)
T d1r6da_          55 PRLRFVHGDIRDAGLLARELR-----GVDAIVHFAAESHV--DRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVST  127 (322)
T ss_dssp             TTEEEEECCTTCHHHHHHHTT-----TCCEEEECCSCCCH--HHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             CCeEEEEeccccchhhhcccc-----ccceEEeecccccc--cccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeec
Confidence            479999999999887775544     47999999987543  2222233333332222  1222       357999988


Q ss_pred             ccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200          101 LATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus       101 ~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      ...+...           .+...|+.+|.+.+.+++.+++++   ++.+..++|+.+..|.
T Consensus       128 ~~~yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~---~~~~~~lR~~~vyGp~  185 (322)
T d1r6da_         128 NQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTY---GLDVRITRCCNNYGPY  185 (322)
T ss_dssp             GGGGCCCSSSCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHH---CCCEEEEEECEEECTT
T ss_pred             ceeecCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCEEEEEeeeEECcC
Confidence            7654322           245689999999999999999887   7999999999998874

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.87  E-value=1.1e-05  Score=55.95  Aligned_cols=135  Identities=6%  Similarity=-0.081  Sum_probs=75.0

Q ss_pred             cccCCCE--EEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCc-----
Q 042200            2 FIQHRAK--VIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTT-----   74 (181)
Q Consensus         2 l~~~G~~--Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~-----   74 (181)
                      |+++|++  |+.+.|+.++....    ..  .+.++.+|+++.+++.++++     .+|.|||+++.........     
T Consensus        23 Ll~~g~~v~v~~~~R~~~~~~~~----~~--~~~~~~~d~~~~~~~~~~~~-----~~d~vi~~a~~~~~~~~~~~~~~~   91 (252)
T d2q46a1          23 LKEGSDKFVAKGLVRSAQGKEKI----GG--EADVFIGDITDADSINPAFQ-----GIDALVILTSAVPKMKPGFDPTKG   91 (252)
T ss_dssp             HHHTTTTCEEEEEESCHHHHHHT----TC--CTTEEECCTTSHHHHHHHHT-----TCSEEEECCCCCCEECTTCCTTSC
T ss_pred             HHHCCCcEEEEEEcCCHHHHHhc----cC--CcEEEEeeeccccccccccc-----cceeeEEEEeeccccccccchhhh
Confidence            6778865  66677887665433    32  67789999999999988887     3799999998754210000     


Q ss_pred             --ccCCHHHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhH-HHHHHHHHHHHHHhcCCCeEE
Q 042200           75 --LDTDNEKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSK-YAVLGLMKNLCVELGQYDIRV  138 (181)
Q Consensus        75 --~~~~~~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK-~a~~~l~~~la~~~~~~~i~v  138 (181)
                        .......+.....+|+.             .+...+.++.....+..+...+..++ .........+..+   .|+++
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  168 (252)
T d2q46a1          92 GRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLAD---SGTPY  168 (252)
T ss_dssp             CCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCGGGGGGGCCHHHHHHHHHHHHHH---SSSCE
T ss_pred             hhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcccccccccchhhhhhhhhhhhhc---ccccc
Confidence              00000001111111111             45666666655544433333332222 2222222233333   47899


Q ss_pred             EEEecCcccCcc
Q 042200          139 NSIAHIVSATPF  150 (181)
Q Consensus       139 ~~i~Pg~v~t~~  150 (181)
                      ..++|+.+..+.
T Consensus       169 ~ilRp~~v~g~~  180 (252)
T d2q46a1         169 TIIRAGGLLDKE  180 (252)
T ss_dssp             EEEEECEEECSC
T ss_pred             eeecceEEECCC
Confidence            999999887653

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.1e-06  Score=59.49  Aligned_cols=121  Identities=12%  Similarity=0.050  Sum_probs=73.1

Q ss_pred             cccCCC--EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCH
Q 042200            2 FIQHRA--KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         2 l~~~G~--~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      |+++|.  +|++++|++......   ..  ..+....+|+.+.+++...++     ..|++||++|....      ..+ 
T Consensus        34 Ll~~g~~~~v~~~~R~~~~~~~~---~~--~~i~~~~~D~~~~~~~~~~~~-----~~d~vi~~~~~~~~------~~~-   96 (232)
T d2bkaa1          34 ILEQGLFSKVTLIGRRKLTFDEE---AY--KNVNQEVVDFEKLDDYASAFQ-----GHDVGFCCLGTTRG------KAG-   96 (232)
T ss_dssp             HHHHTCCSEEEEEESSCCCCCSG---GG--GGCEEEECCGGGGGGGGGGGS-----SCSEEEECCCCCHH------HHH-
T ss_pred             HHhCCCCCEEEEEecChhhhccc---cc--ceeeeeeeccccccccccccc-----cccccccccccccc------ccc-
Confidence            556674  799999865322110   11  256667778877665554444     47999999986422      011 


Q ss_pred             HHHHHhhheeec-------------ceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCe-EEEEEecCc
Q 042200           80 EKVKRVMIMVVF-------------LGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDI-RVNSIAHIV  145 (181)
Q Consensus        80 ~~~~~~~~~n~~-------------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i-~v~~i~Pg~  145 (181)
                        .....++|+.             -.++|++|+..+..  .....|+.+|...+...+.    +   +. ++..++||+
T Consensus        97 --~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~--~~~~~Y~~~K~~~E~~l~~----~---~~~~~~IlRP~~  165 (232)
T d2bkaa1          97 --AEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADK--SSNFLYLQVKGEVEAKVEE----L---KFDRYSVFRPGV  165 (232)
T ss_dssp             --HHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHHHT----T---CCSEEEEEECCE
T ss_pred             --hhhhhhhcccccceeeecccccCccccccCCcccccc--CccchhHHHHHHhhhcccc----c---cccceEEecCce
Confidence              1111222222             35799999875543  2345699999888765432    2   33 477899999


Q ss_pred             ccCcc
Q 042200          146 SATPF  150 (181)
Q Consensus       146 v~t~~  150 (181)
                      +..+.
T Consensus       166 i~G~~  170 (232)
T d2bkaa1         166 LLCDR  170 (232)
T ss_dssp             EECTT
T ss_pred             eecCC
Confidence            98764

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=97.81  E-value=2.4e-05  Score=55.82  Aligned_cols=97  Identities=10%  Similarity=-0.031  Sum_probs=58.4

Q ss_pred             eecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHHHhhheeec------------ceeEEEecccccc
Q 042200           37 CNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVKRVMIMVVF------------LGVLLFTANLATE  104 (181)
Q Consensus        37 ~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~------------~~~iv~iss~~~~  104 (181)
                      +|++|.++++++++.   .++|+|||+|+....  .... ..   ....+..|+.            ...+++.||...+
T Consensus        36 ~D~~d~~~~~~~l~~---~~~d~vih~a~~~~~--~~~~-~~---~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ss~~v~  106 (281)
T d1vl0a_          36 LDITNVLAVNKFFNE---KKPNVVINCAAHTAV--DKCE-EQ---YDLAYKINAIGPKNLAAAAYSVGAEIVQISTDYVF  106 (281)
T ss_dssp             CCTTCHHHHHHHHHH---HCCSEEEECCCCCCH--HHHH-HC---HHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEGGGS
T ss_pred             ccCCCHHHHHHHHHH---cCCCEEEeecccccc--cccc-cc---chhhcccccccccccccccccccccccccccceee
Confidence            478999999999885   257999999997643  1111 11   1222222222            3455555554322


Q ss_pred             cc-----------CccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200          105 TI-----------GEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus       105 ~~-----------~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      ..           ..+...|+.+|...+.+++    ++   +.....++|+.+..+
T Consensus       107 ~~~~~~~~~e~~~~~~~~~~~~~k~~~e~~~~----~~---~~~~~i~R~~~vyG~  155 (281)
T d1vl0a_         107 DGEAKEPITEFDEVNPQSAYGKTKLEGENFVK----AL---NPKYYIVRTAWLYGD  155 (281)
T ss_dssp             CSCCSSCBCTTSCCCCCSHHHHHHHHHHHHHH----HH---CSSEEEEEECSEESS
T ss_pred             eccccccccccccccchhhhhhhhhHHHHHHH----Hh---CCCccccceeEEeCC
Confidence            11           1245568888877766554    23   467778999998776

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=97.74  E-value=1e-08  Score=70.34  Aligned_cols=66  Identities=6%  Similarity=-0.115  Sum_probs=39.4

Q ss_pred             cCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc-cchhcCCChHHHHHHHHHhhccccccc
Q 042200          106 IGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF-FCNAMGIDKKTFKELLYASANLKGVVL  177 (181)
Q Consensus       106 ~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (181)
                      .......|...+++....++..+.++....+.++.+.||.+.+.. .+++    ...+..+.+..  ++++.|
T Consensus       142 ~~~~~~~~~~~~a~~~~~a~~~~~~~~~~~~g~~~~~~G~l~~a~~~e~~----~~l~~~~~~~~--~~g~~G  208 (212)
T d1jaya_         142 NLDEKFDWDVPVCGDDDESKKVVMSLISEIDGLRPLDAGPLSNSRLVESL----TPLILNIMRFN--GMGELG  208 (212)
T ss_dssp             CTTCCCCEEEEEEESCHHHHHHHHHHHHHSTTEEEEEEESGGGHHHHHTH----HHHHHHHHHHH--TCCCCC
T ss_pred             CcccccCccceEEeCCHHHHHHHHHHHhhCCCeEEEEeChHHHHHHHHhH----HHHHHHHHHhC--CCCCCC
Confidence            333444555556555666777766666556778899999888753 2222    12344445555  667765

>d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD)
species: Salmonella enterica serovar typhimurium [TaxId: 90371]

Probab=97.71  E-value=0.00011  Score=52.44  Aligned_cols=113  Identities=9%  Similarity=-0.001  Sum_probs=62.3

Q ss_pred             EEEeecchHHHHHHHhHcCCCCceEE-------EeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            9 VIIADVQDDLCRALCKEFDSDELISY-------VCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         9 Vv~~~r~~~~~~~~~~~~~~~~~~~~-------~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      |++++-+---+..+++.+...+.+..       +.+|++|.+.++++++.   .++|+|||+||....  ......+...
T Consensus         3 ILItG~tGfiG~~l~~~L~~~g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~---~~~D~Vih~Aa~~~~--~~~~~~~~~~   77 (298)
T d1n2sa_           3 ILLFGKTGQVGWELQRSLAPVGNLIALDVHSKEFCGDFSNPKGVAETVRK---LRPDVIVNAAAHTAV--DKAESEPELA   77 (298)
T ss_dssp             EEEECTTSHHHHHHHHHTTTTSEEEEECTTCSSSCCCTTCHHHHHHHHHH---HCCSEEEECCCCCCH--HHHTTCHHHH
T ss_pred             EEEECCCCHHHHHHHHHHHhCCCEEEEECCCccccCcCCCHHHHHHHHHH---cCCCEEEEecccccc--cccccCcccc
Confidence            45555554444555555544221111       34699999999999985   347999999997643  2211122112


Q ss_pred             HHHhh--heeec------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHH
Q 042200           82 VKRVM--IMVVF------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKN  126 (181)
Q Consensus        82 ~~~~~--~~n~~------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~  126 (181)
                      +...+  ..++.      ..+++++||.......           .+...|+.+|.+.+.+.+.
T Consensus        78 ~~~n~~~~~~l~~~~~~~~~~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~~~  141 (298)
T d1n2sa_          78 QLLNATSVEAIAKAANETGAWVVHYSTDYVFPGTGDIPWQETDATSPLNVYGKTKLAGEKALQD  141 (298)
T ss_dssp             HHHHTHHHHHHHHHHTTTTCEEEEEEEGGGSCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHHH
T ss_pred             ccccccccccchhhhhccccccccccccccccCCCCCCCccccccCCCchHhhhhhhhhhhHHh
Confidence            21111  11111      4567777775443221           2446799999888766543

>d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: ADP-L-glycero-D-mannoheptose 6-epimerase
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=4.8e-05  Score=54.69  Aligned_cols=132  Identities=14%  Similarity=0.135  Sum_probs=75.5

Q ss_pred             cccCCC-EEEEeecchH--HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccC
Q 042200            2 FIQHRA-KVIIADVQDD--LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~--~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      |+++|+ .|+++++-..  +.... .+        ...+|..+.+........ ..+..+++++|.|+....  .   ..
T Consensus        19 L~~~g~~~V~~~d~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~aa~~~~--~---~~   84 (307)
T d1eq2a_          19 LNDKGITDILVVDNLKDGTKFVNL-VD--------LNIADYMDKEDFLIQIMAGEEFGDVEAIFHEGACSST--T---EW   84 (307)
T ss_dssp             HHTTTCCCEEEEECCSSGGGGHHH-HT--------SCCSEEEEHHHHHHHHHTTCCCSSCCEEEECCSCCCT--T---CC
T ss_pred             HHhCCCCeEEEEECCCCcchhhcc-cc--------cchhhhccchHHHHHHhhhhcccchhhhhhhcccccc--c---cc
Confidence            678896 5777764221  11111 11        122344444444444343 455678999999986543  1   11


Q ss_pred             CHHH-HHHhhhe--eec------ceeEEEeccccccccC-----------ccchhhHhhHHHHHHHHHHHHHHhcCCCeE
Q 042200           78 DNEK-VKRVMIM--VVF------LGVLLFTANLATETIG-----------EALYDYLMSKYAVLGLMKNLCVELGQYDIR  137 (181)
Q Consensus        78 ~~~~-~~~~~~~--n~~------~~~iv~iss~~~~~~~-----------~~~~~y~~sK~a~~~l~~~la~~~~~~~i~  137 (181)
                      +.+. ....+..  ++.      ..++++.||.....+.           .+...|+.+|.+.+.+++.+..++   ++.
T Consensus        85 ~~~~~~~~~~~~~~~~l~~~~~~~i~~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~~K~~~e~~~~~~~~~~---~~~  161 (307)
T d1eq2a_          85 DGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEA---NSQ  161 (307)
T ss_dssp             CHHHHHHHTHHHHHHHHHHHHHHTCCEEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHHHHHHHHHHHHHHGGGC---SSC
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccc---ccc
Confidence            2211 1211111  111      3346666665544321           356689999999999998887766   788


Q ss_pred             EEEEecCcccCcc
Q 042200          138 VNSIAHIVSATPF  150 (181)
Q Consensus       138 v~~i~Pg~v~t~~  150 (181)
                      +..++|..+..|.
T Consensus       162 ~~~~r~~~vyGp~  174 (307)
T d1eq2a_         162 IVGFRYFNVYGPR  174 (307)
T ss_dssp             EEEEEECEEESSS
T ss_pred             cccccceeEeecc
Confidence            9999999888774

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=97.23  E-value=0.002  Score=45.60  Aligned_cols=132  Identities=9%  Similarity=0.080  Sum_probs=75.4

Q ss_pred             cccCCCEEEEeecchHHH-----HHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDDLC-----RALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~-----~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|++++|+....     ......+.. ..+.++.+|+.+.......+..     .+.+||+++....      .
T Consensus        23 L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~-----~~~vi~~~~~~~~------~   90 (307)
T d1qyca_          23 SLDLGHPTFLLVRESTASSNSEKAQLLESFKA-SGANIVHGSIDDHASLVEAVKN-----VDVVISTVGSLQI------E   90 (307)
T ss_dssp             HHHTTCCEEEECCCCCTTTTHHHHHHHHHHHT-TTCEEECCCTTCHHHHHHHHHT-----CSEEEECCCGGGS------G
T ss_pred             HHHCCCeEEEEECCCccccchhHHHHHHhhcc-CCcEEEEeecccchhhhhhhhh-----ceeeeeccccccc------c
Confidence            678999999999963221     111222222 3578899999999988888873     6789999886543      1


Q ss_pred             CCHHHHHHhhheeecceeEEEeccccccccCccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCcc
Q 042200           77 TDNEKVKRVMIMVVFLGVLLFTANLATETIGEALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATPF  150 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~~  150 (181)
                      .....++......  ...+++.|+............+...+.........+..+.   ++....++|+.+..+.
T Consensus        91 ~~~~~~~a~~~~~--~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~r~~~v~g~~  159 (307)
T d1qyca_          91 SQVNIIKAIKEVG--TVKRFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAE---GIPYTYVSSNCFAGYF  159 (307)
T ss_dssp             GGHHHHHHHHHHC--CCSEEECSCCSSCTTSCCCCTTHHHHHHHHHHHHHHHHHH---TCCBEEEECCEEHHHH
T ss_pred             hhhHHHHHHHHhc--cccceeeeccccccccccccccccccccccccccchhhcc---CCCceecccceecCCC
Confidence            1122222222222  2356666665443333333333333333333333333333   6788889998887654

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=97.12  E-value=0.0026  Score=45.26  Aligned_cols=128  Identities=6%  Similarity=-0.081  Sum_probs=71.1

Q ss_pred             cccCCCEEEEeecchH-----HHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCccc
Q 042200            2 FIQHRAKVIIADVQDD-----LCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLD   76 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~-----~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~   76 (181)
                      |+++|++|+++.|+..     +.+.. ..+.. ..+.++.+|+++.+++.+.+.     ..+.++++++....  .    
T Consensus        23 L~~~G~~V~~~~R~~~~~~~~~~~~~-~~~~~-~~v~~v~~d~~d~~~~~~~~~-----~~~~~~~~~~~~~~--~----   89 (312)
T d1qyda_          23 SISLGHPTYVLFRPEVVSNIDKVQML-LYFKQ-LGAKLIEASLDDHQRLVDALK-----QVDVVISALAGGVL--S----   89 (312)
T ss_dssp             HHHTTCCEEEECCSCCSSCHHHHHHH-HHHHT-TTCEEECCCSSCHHHHHHHHT-----TCSEEEECCCCSSS--S----
T ss_pred             HHhCCCEEEEEECCCcccchhHHHHH-hhhcc-CCcEEEEeecccchhhhhhcc-----Ccchhhhhhhhccc--c----
Confidence            6789999999999632     22222 22221 268899999999999988877     36788888875433  1    


Q ss_pred             CCHHHHHHhhheeec--ceeEEEeccccccccC-----ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccCc
Q 042200           77 TDNEKVKRVMIMVVF--LGVLLFTANLATETIG-----EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSATP  149 (181)
Q Consensus        77 ~~~~~~~~~~~~n~~--~~~iv~iss~~~~~~~-----~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t~  149 (181)
                      .........+..-..  ..++++.||.......     .+...|..++...+    .+..+   .++....++|+.+..+
T Consensus        90 ~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---~~~~~~i~r~~~~~g~  162 (312)
T d1qyda_          90 HHILEQLKLVEAIKEAGNIKRFLPSEFGMDPDIMEHALQPGSITFIDKRKVR----RAIEA---ASIPYTYVSSNMFAGY  162 (312)
T ss_dssp             TTTTTHHHHHHHHHHSCCCSEEECSCCSSCTTSCCCCCSSTTHHHHHHHHHH----HHHHH---TTCCBCEEECCEEHHH
T ss_pred             cchhhhhHHHHHHHHhcCCcEEEEeeccccCCCcccccchhhhhhHHHHHHH----Hhhcc---cccceEEeccceeecC
Confidence            111111111111111  3456666765433221     12223444444333    23222   3677788888877654

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=96.63  E-value=0.0003  Score=48.08  Aligned_cols=81  Identities=14%  Similarity=0.106  Sum_probs=47.4

Q ss_pred             CCccEEEEcccccCCCCCCcccCCHHHH-HHhh--heeec-------ceeEEEeccccccccCccchhhHhhHHHHHHHH
Q 042200           55 GKLDIMFNNAGIISNMDRTTLDTDNEKV-KRVM--IMVVF-------LGVLLFTANLATETIGEALYDYLMSKYAVLGLM  124 (181)
Q Consensus        55 ~~id~vi~~ag~~~~~~~~~~~~~~~~~-~~~~--~~n~~-------~~~iv~iss~~~~~~~~~~~~y~~sK~a~~~l~  124 (181)
                      ..+|.+||++|....  ..   ...+.+ ...+  ..++.       -.+++++|+..+..  .....|..+|...+...
T Consensus        61 ~~~d~vi~~~g~~~~--~~---~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~--~~~~~y~~~K~~~E~~l  133 (212)
T d2a35a1          61 GSIDTAFCCLGTTIK--EA---GSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--KSSIFYNRVKGELEQAL  133 (212)
T ss_dssp             SCCSEEEECCCCCHH--HH---SSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--TCSSHHHHHHHHHHHHH
T ss_pred             cchheeeeeeeeecc--cc---ccccccccchhhhhhhccccccccccccccccccccccc--ccccchhHHHHHHhhhc
Confidence            468999999986432  10   111111 1111  11121       46799998865432  33567999998777544


Q ss_pred             HHHHHHhcCCCe-EEEEEecCcccCc
Q 042200          125 KNLCVELGQYDI-RVNSIAHIVSATP  149 (181)
Q Consensus       125 ~~la~~~~~~~i-~v~~i~Pg~v~t~  149 (181)
                      +       ..+. +...++|+++..+
T Consensus       134 ~-------~~~~~~~~I~Rp~~v~G~  152 (212)
T d2a35a1         134 Q-------EQGWPQLTIARPSLLFGP  152 (212)
T ss_dssp             T-------TSCCSEEEEEECCSEEST
T ss_pred             c-------ccccccceeeCCcceeCC
Confidence            3       2243 5778999998765

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=96.60  E-value=0.0058  Score=44.56  Aligned_cols=126  Identities=7%  Similarity=-0.044  Sum_probs=68.6

Q ss_pred             CcccCCCEEEEeecchHHHHHH-HhHcCCCCceEEEeeecCChhHH-HHHHHhcccCCccEEEEcccccCCCCCCcccCC
Q 042200            1 VFIQHRAKVIIADVQDDLCRAL-CKEFDSDELISYVCCNVTIDSDV-KNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTD   78 (181)
Q Consensus         1 ~l~~~G~~Vv~~~r~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~i-~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~   78 (181)
                      +|+++|++|+++.|+..+.... ....   ..+.++.+|++|..++ ..++.     ..|.++++......       ..
T Consensus        22 ~Ll~~G~~V~~l~R~~~~~~~~~~~~~---~~v~~~~gD~~d~~~~~~~a~~-----~~~~~~~~~~~~~~-------~~   86 (350)
T d1xgka_          22 VAAAVGHHVRAQVHSLKGLIAEELQAI---PNVTLFQGPLLNNVPLMDTLFE-----GAHLAFINTTSQAG-------DE   86 (350)
T ss_dssp             HHHHTTCCEEEEESCSCSHHHHHHHTS---TTEEEEESCCTTCHHHHHHHHT-----TCSEEEECCCSTTS-------CH
T ss_pred             HHHhCCCeEEEEECCcchhhhhhhccc---CCCEEEEeeCCCcHHHHHHHhc-----CCceEEeecccccc-------hh
Confidence            3678999999999986544321 2222   3689999999996654 44443     45666666543221       11


Q ss_pred             HHHHHHhhheeec--ceeEEEeccccccccC--ccchhhHhhHHHHHHHHHHHHHHhcCCCeEEEEEecCcccC
Q 042200           79 NEKVKRVMIMVVF--LGVLLFTANLATETIG--EALYDYLMSKYAVLGLMKNLCVELGQYDIRVNSIAHIVSAT  148 (181)
Q Consensus        79 ~~~~~~~~~~n~~--~~~iv~iss~~~~~~~--~~~~~y~~sK~a~~~l~~~la~~~~~~~i~v~~i~Pg~v~t  148 (181)
                      ...-.+.++....  ..+++.+||.......  .....|..+|...+.+.+.       .++....++|+....
T Consensus        87 ~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~vr~~~~~~  153 (350)
T d1xgka_          87 IAIGKDLADAAKRAGTIQHYIYSSMPDHSLYGPWPAVPMWAPKFTVENYVRQ-------LGLPSTFVYAGIYNN  153 (350)
T ss_dssp             HHHHHHHHHHHHHHSCCSEEEEEECCCGGGTSSCCCCTTTHHHHHHHHHHHT-------SSSCEEEEEECEEGG
T ss_pred             hhhhhHHHHHHHHhCCCceEEEeeccccccCCcccchhhhhhHHHHHHHHHh-------hccCceeeeeceeec
Confidence            1111222222211  2466777775543332  2334566677666554432       245666777765433

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=93.86  E-value=0.11  Score=33.33  Aligned_cols=83  Identities=8%  Similarity=-0.028  Sum_probs=48.4

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeec--CChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNV--TIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~--~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      ...|++|+++++++++++.. +++..  .. .+..|-  .+...+.+.+......++|++|.++|..            .
T Consensus        47 k~~Ga~vi~v~~~~~r~~~a-~~~ga--~~-~~~~~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~------------~  110 (170)
T d1e3ja2          47 KAYGAFVVCTARSPRRLEVA-KNCGA--DV-TLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNE------------K  110 (170)
T ss_dssp             HHTTCEEEEEESCHHHHHHH-HHTTC--SE-EEECCTTTSCHHHHHHHHHHHSSSCCSEEEECSCCH------------H
T ss_pred             hhhcccccccchHHHHHHHH-HHcCC--cE-EEeccccccccchhhhhhhcccccCCceeeecCCCh------------H
Confidence            35799999999999988655 34433  22 222222  2333444444432224689999999842            2


Q ss_pred             HHHHhhheeecceeEEEeccc
Q 042200           81 KVKRVMIMVVFLGVLLFTANL  101 (181)
Q Consensus        81 ~~~~~~~~n~~~~~iv~iss~  101 (181)
                      .++..++.--..|+++.++..
T Consensus       111 ~~~~a~~~~~~~G~iv~~G~~  131 (170)
T d1e3ja2         111 CITIGINITRTGGTLMLVGMG  131 (170)
T ss_dssp             HHHHHHHHSCTTCEEEECSCC
T ss_pred             HHHHHHHHHhcCCceEEEecC
Confidence            244444333337899988743

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=92.98  E-value=0.67  Score=29.90  Aligned_cols=82  Identities=16%  Similarity=0.129  Sum_probs=49.9

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|+.++++.++.+.. +++..  .   ..+|-++.+..+...+.....++|+++.+.|..             .++
T Consensus        52 ~~Ga~vi~~~~~~~~~~~~-~~~Ga--~---~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~vG~~-------------~~~  112 (182)
T d1v3va2          52 LKGCKVVGAAGSDEKIAYL-KQIGF--D---AAFNYKTVNSLEEALKKASPDGYDCYFDNVGGE-------------FLN  112 (182)
T ss_dssp             HTTCEEEEEESSHHHHHHH-HHTTC--S---EEEETTSCSCHHHHHHHHCTTCEEEEEESSCHH-------------HHH
T ss_pred             ccCCEEEEeCCCHHHHHHH-Hhhhh--h---hhcccccccHHHHHHHHhhcCCCceeEEecCch-------------hhh
Confidence            5799999999988776554 44433  1   123555555555554442225799999999831             234


Q ss_pred             HhhheeecceeEEEecccccc
Q 042200           84 RVMIMVVFLGVLLFTANLATE  104 (181)
Q Consensus        84 ~~~~~n~~~~~iv~iss~~~~  104 (181)
                      ..++.--..|+++.+......
T Consensus       113 ~~~~~l~~~G~~v~~G~~~~~  133 (182)
T d1v3va2         113 TVLSQMKDFGKIAICGAISVY  133 (182)
T ss_dssp             HHGGGEEEEEEEEECCCGGGT
T ss_pred             hhhhhccCCCeEEeecceeec
Confidence            444333337889988765443

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=92.74  E-value=0.087  Score=32.54  Aligned_cols=54  Identities=11%  Similarity=0.209  Sum_probs=40.5

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNN   63 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~   63 (181)
                      |.++|++|++++++++..++...++    .+.++..|.++.+.++++--    ...|.++-.
T Consensus        19 L~~~g~~v~vid~d~~~~~~~~~~~----~~~vi~Gd~~~~~~l~~~~i----~~a~~vv~~   72 (132)
T d1lssa_          19 LSEKGHDIVLIDIDKDICKKASAEI----DALVINGDCTKIKTLEDAGI----EDADMYIAV   72 (132)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHHC----SSEEEESCTTSHHHHHHTTT----TTCSEEEEC
T ss_pred             HHHCCCCcceecCChhhhhhhhhhh----hhhhccCcccchhhhhhcCh----hhhhhhccc
Confidence            5678999999999999988876654    35678899999887766532    235666654

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=91.40  E-value=0.42  Score=30.36  Aligned_cols=55  Identities=13%  Similarity=0.109  Sum_probs=39.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNA   64 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~a   64 (181)
                      |+++|++|++++|+.+++++..+.+..   ......+..+.......+..     .|.++...
T Consensus        21 L~~~g~~V~v~dr~~~~a~~l~~~~~~---~~~~~~~~~~~~~~~~~i~~-----~~~~i~~~   75 (182)
T d1e5qa1          21 LTDSGIKVTVACRTLESAKKLSAGVQH---STPISLDVNDDAALDAEVAK-----HDLVISLI   75 (182)
T ss_dssp             HHTTTCEEEEEESCHHHHHHHHTTCTT---EEEEECCTTCHHHHHHHHTT-----SSEEEECS
T ss_pred             HHhCCCEEEEEECChHHHHHHHhcccc---cccccccccchhhhHhhhhc-----cceeEeec
Confidence            678999999999999999998876653   45555566666666666653     35555444

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=90.60  E-value=1  Score=28.99  Aligned_cols=79  Identities=11%  Similarity=-0.008  Sum_probs=45.6

Q ss_pred             cCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCC--hhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCH
Q 042200            4 QHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTI--DSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDN   79 (181)
Q Consensus         4 ~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~--~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~   79 (181)
                      ..|+ +|+++++++++++.. +++..   -.++  |.++  ..+..+.+.+ ....++|++|.++|...           
T Consensus        50 ~~Ga~~Vi~~~~~~~~~~~a-~~lGa---~~vi--~~~~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~-----------  112 (182)
T d1vj0a2          50 SLGAENVIVIAGSPNRLKLA-EEIGA---DLTL--NRRETSVEERRKAIMDITHGRGADFILEATGDSR-----------  112 (182)
T ss_dssp             HTTBSEEEEEESCHHHHHHH-HHTTC---SEEE--ETTTSCHHHHHHHHHHHTTTSCEEEEEECSSCTT-----------
T ss_pred             cccccccccccccccccccc-ccccc---eEEE--eccccchHHHHHHHHHhhCCCCceEEeecCCchh-----------
Confidence            5787 799999999888654 55543   1222  4433  3333333333 22246999999998532           


Q ss_pred             HHHHHhhheeecceeEEEecc
Q 042200           80 EKVKRVMIMVVFLGVLLFTAN  100 (181)
Q Consensus        80 ~~~~~~~~~n~~~~~iv~iss  100 (181)
                       .++..++.--.+|+++.++-
T Consensus       113 -~~~~a~~~l~~~G~iv~~G~  132 (182)
T d1vj0a2         113 -ALLEGSELLRRGGFYSVAGV  132 (182)
T ss_dssp             -HHHHHHHHEEEEEEEEECCC
T ss_pred             -HHHHHHHHhcCCCEEEEEee
Confidence             13333333233788887763

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.36  E-value=0.91  Score=28.86  Aligned_cols=83  Identities=11%  Similarity=0.047  Sum_probs=50.0

Q ss_pred             ccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHH
Q 042200            3 IQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEK   81 (181)
Q Consensus         3 ~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~   81 (181)
                      ...|+ +|+++++++.+++-. +++..   -.++..+-.+.....+.+......++|++|.++|...            .
T Consensus        47 ~~~G~~~Vi~~d~~~~rl~~a-~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~------------~  110 (171)
T d1pl8a2          47 KAMGAAQVVVTDLSATRLSKA-KEIGA---DLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEA------------S  110 (171)
T ss_dssp             HHTTCSEEEEEESCHHHHHHH-HHTTC---SEEEECSSCCHHHHHHHHHHHHTSCCSEEEECSCCHH------------H
T ss_pred             HHcCCceEEeccCCHHHHHHH-HHhCC---cccccccccccccccccccccCCCCceEEEeccCCch------------h
Confidence            35688 699999999888754 45543   2333334444555555555422246899999999421            2


Q ss_pred             HHHhhheeecceeEEEeccc
Q 042200           82 VKRVMIMVVFLGVLLFTANL  101 (181)
Q Consensus        82 ~~~~~~~n~~~~~iv~iss~  101 (181)
                      ++..++.--.+|++++++..
T Consensus       111 ~~~a~~~~~~gG~iv~~G~~  130 (171)
T d1pl8a2         111 IQAGIYATRSGGTLVLVGLG  130 (171)
T ss_dssp             HHHHHHHSCTTCEEEECSCC
T ss_pred             HHHHHHHhcCCCEEEEEecC
Confidence            33333333337888887643

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=88.08  E-value=0.55  Score=29.40  Aligned_cols=59  Identities=7%  Similarity=-0.097  Sum_probs=40.8

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.++|.+|++++.+++.......+... ..+.++.+|.++++.++++--    ...+.+|-+.+
T Consensus        22 L~~~~~~v~vId~d~~~~~~~~~~~~~-~~~~vi~Gd~~d~~~L~~a~i----~~a~~vi~~~~   80 (153)
T d1id1a_          22 LNQRGQNVTVISNLPEDDIKQLEQRLG-DNADVIPGDSNDSSVLKKAGI----DRCRAILALSD   80 (153)
T ss_dssp             HHHTTCCEEEEECCCHHHHHHHHHHHC-TTCEEEESCTTSHHHHHHHTT----TTCSEEEECSS
T ss_pred             HHHcCCCEEEEeccchhHHHHHHHhhc-CCcEEEEccCcchHHHHHhcc----ccCCEEEEccc
Confidence            567889999999887766555554432 258889999999887665543    34677776654

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=86.78  E-value=1.6  Score=27.94  Aligned_cols=79  Identities=15%  Similarity=0.051  Sum_probs=47.1

Q ss_pred             cCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            4 QHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         4 ~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      ..|+ +|+++++++++++.. +++..   .  ..+|.++.+..+++.+.....++|++|.++|...            .+
T Consensus        49 ~~Ga~~Vi~~d~~~~r~~~a-~~lGa---~--~~i~~~~~~~~~~v~~~t~g~G~D~vid~~g~~~------------~~  110 (174)
T d1jqba2          49 LRGAGRIIGVGSRPICVEAA-KFYGA---T--DILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSE------------TL  110 (174)
T ss_dssp             TTTCSCEEEECCCHHHHHHH-HHHTC---S--EEECGGGSCHHHHHHHHTTTSCEEEEEECSSCTT------------HH
T ss_pred             cccccccccccchhhhHHHH-HhhCc---c--ccccccchhHHHHHHHHhhccCcceEEEccCCHH------------HH
Confidence            4676 599999998887655 44543   2  2345555444444444322246999999999532            13


Q ss_pred             HHhhheeecceeEEEecc
Q 042200           83 KRVMIMVVFLGVLLFTAN  100 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss  100 (181)
                      +..++.--..|+++.++-
T Consensus       111 ~~a~~~~~~~G~iv~~G~  128 (174)
T d1jqba2         111 SQAVKMVKPGGIISNINY  128 (174)
T ss_dssp             HHHHHHEEEEEEEEECCC
T ss_pred             HHHHHHHhcCCEEEEEee
Confidence            444433333788888763

>d1wg8a2 c.66.1.23 (A:5-108,A:207-284) TM0872, methyltransferase domain {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermus thermophilus [TaxId: 274]

Probab=86.06  E-value=1.1  Score=29.15  Aligned_cols=63  Identities=13%  Similarity=0.042  Sum_probs=44.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      +++++.+|+.+||+++..+.......  .++.++..+.++.++   .+.....+++|+|+.--|....
T Consensus        36 iL~~~~~viaiD~D~~ai~~a~~~~~--~~~~~~~~~f~~~~~---~l~~~~~~~vdgIl~DLGvSs~   98 (182)
T d1wg8a2          36 ILERGGRVIGLDQDPEAVARAKGLHL--PGLTVVQGNFRHLKR---HLAALGVERVDGILADLGVSSF   98 (182)
T ss_dssp             HHHTTCEEEEEESCHHHHHHHHHTCC--TTEEEEESCGGGHHH---HHHHTTCSCEEEEEEECSCCHH
T ss_pred             HhcccCcEEEEhhhhhHHHHHhhccc--cceeEeehHHHHHHH---HHHHcCCCccCEEEEEccCCHH
Confidence            45567799999999988776544333  378899888877444   4443123679999999987543

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=85.59  E-value=2.4  Score=30.02  Aligned_cols=63  Identities=8%  Similarity=0.014  Sum_probs=40.5

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      ++.|.+|+.++.++..++.+.+.+..+  .++.++..|..+..  +.+..  ...+.|.||.+......
T Consensus       164 a~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~--~~~~~--~~~~fD~Vi~DpP~~~~  228 (318)
T d1wxxa2         164 ALGFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLL--RRLEK--EGERFDLVVLDPPAFAK  228 (318)
T ss_dssp             HHHEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHH--HHHHH--TTCCEEEEEECCCCSCC
T ss_pred             HhcCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHh--hhhHh--hhcCCCEEEEcCCcccc
Confidence            445667999999988877766554332  46788887774422  22222  22468999998765443

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=84.82  E-value=1.9  Score=27.34  Aligned_cols=80  Identities=14%  Similarity=0.078  Sum_probs=48.6

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|+.+++++++.+.. +++..   -  ..+|.++++-.+++.+.....++|+++.+.|..             .+.
T Consensus        51 ~~Ga~Vi~~~~s~~k~~~~-~~lGa---~--~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g~~-------------~~~  111 (179)
T d1qora2          51 ALGAKLIGTVGTAQKAQSA-LKAGA---W--QVINYREEDLVERLKEITGGKKVRVVYDSVGRD-------------TWE  111 (179)
T ss_dssp             HHTCEEEEEESSHHHHHHH-HHHTC---S--EEEETTTSCHHHHHHHHTTTCCEEEEEECSCGG-------------GHH
T ss_pred             HhCCeEeecccchHHHHHH-HhcCC---e--EEEECCCCCHHHHHHHHhCCCCeEEEEeCccHH-------------HHH
Confidence            5689999999999887664 45543   1  234767755444443333334689999998832             123


Q ss_pred             HhhheeecceeEEEecccc
Q 042200           84 RVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        84 ~~~~~n~~~~~iv~iss~~  102 (181)
                      ..++.--..|+++.++...
T Consensus       112 ~~~~~l~~~G~~v~~g~~~  130 (179)
T d1qora2         112 RSLDCLQRRGLMVSFGNSS  130 (179)
T ss_dssp             HHHHTEEEEEEEEECCCTT
T ss_pred             HHHHHHhcCCeeeeccccc
Confidence            3333333368888776543

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=84.55  E-value=0.31  Score=29.82  Aligned_cols=55  Identities=13%  Similarity=0.178  Sum_probs=39.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |.+.|++|++++.+++..++....     ....+.+|.++.+.+.++--    ...|.+|-..+
T Consensus        19 L~~~g~~vvvid~d~~~~~~~~~~-----~~~~~~gd~~~~~~l~~a~i----~~a~~vi~~~~   73 (134)
T d2hmva1          19 LHRMGHEVLAVDINEEKVNAYASY-----ATHAVIANATEENELLSLGI----RNFEYVIVAIG   73 (134)
T ss_dssp             HHHTTCCCEEEESCHHHHHHTTTT-----CSEEEECCTTCTTHHHHHTG----GGCSEEEECCC
T ss_pred             HHHCCCeEEEecCcHHHHHHHHHh-----CCcceeeecccchhhhccCC----ccccEEEEEcC
Confidence            678899999999999988876432     24466789999887766522    13566666555

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.16  E-value=1.7  Score=27.54  Aligned_cols=78  Identities=6%  Similarity=0.069  Sum_probs=47.4

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|+++++++++.+. ++++..   ..  ..|.++.+-.+++.+.....++|+++.+.|..             .++
T Consensus        51 ~~G~~vi~~~~~~~~~~~-~~~~Ga---~~--vi~~~~~~~~~~i~~~t~~~g~d~v~d~~g~~-------------~~~  111 (174)
T d1yb5a2          51 AYGLKILGTAGTEEGQKI-VLQNGA---HE--VFNHREVNYIDKIKKYVGEKGIDIIIEMLANV-------------NLS  111 (174)
T ss_dssp             HTTCEEEEEESSHHHHHH-HHHTTC---SE--EEETTSTTHHHHHHHHHCTTCEEEEEESCHHH-------------HHH
T ss_pred             ccCccccccccccccccc-ccccCc---cc--ccccccccHHHHhhhhhccCCceEEeecccHH-------------HHH
Confidence            579999999988776654 445543   12  23666655444444432224699999998831             134


Q ss_pred             HhhheeecceeEEEecc
Q 042200           84 RVMIMVVFLGVLLFTAN  100 (181)
Q Consensus        84 ~~~~~n~~~~~iv~iss  100 (181)
                      ..++.--..|+++.++.
T Consensus       112 ~~~~~l~~~G~iv~~G~  128 (174)
T d1yb5a2         112 KDLSLLSHGGRVIVVGS  128 (174)
T ss_dssp             HHHHHEEEEEEEEECCC
T ss_pred             HHHhccCCCCEEEEEec
Confidence            44433222789998864

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=83.85  E-value=0.55  Score=30.47  Aligned_cols=61  Identities=7%  Similarity=0.085  Sum_probs=39.6

Q ss_pred             cccCCC-EEEEeecchHHHHHH---HhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRA-KVIIADVQDDLCRAL---CKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~---~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |++.|. ++.++.|+.++.+++   .+.+...........|+.+.+++...+.     ..|+|||+....
T Consensus        37 l~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~diiIN~Tp~G  101 (182)
T d1vi2a1          37 GAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA-----SADILTNGTKVG  101 (182)
T ss_dssp             HHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----TCSEEEECSSTT
T ss_pred             HhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----ccceeccccCCc
Confidence            456676 488889986554443   3333322234456778888887776665     369999998753

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=83.69  E-value=2.3  Score=27.12  Aligned_cols=56  Identities=14%  Similarity=0.228  Sum_probs=35.0

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      |.+.+.+|.++.|+.++++...+.+.....+.....|-            ......|++||+......
T Consensus        37 L~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~------------~~~~~~diiIN~tp~g~~   92 (171)
T d1p77a1          37 LLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS------------IPLQTYDLVINATSAGLS   92 (171)
T ss_dssp             HHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------------CCCSCCSEEEECCCC---
T ss_pred             HcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc------------ccccccceeeeccccccc
Confidence            34556779999999999888887775422333333221            112457999999886433

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=83.64  E-value=5.6  Score=28.02  Aligned_cols=62  Identities=13%  Similarity=0.012  Sum_probs=39.2

Q ss_pred             ccCCC-EEEEeecchHHHHHHHhHcC--CC--CceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccC
Q 042200            3 IQHRA-KVIIADVQDDLCRALCKEFD--SD--ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIIS   68 (181)
Q Consensus         3 ~~~G~-~Vv~~~r~~~~~~~~~~~~~--~~--~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~   68 (181)
                      ++.|+ +|+.++.+...++...+.+.  ..  .++.++..|+-  +.++.+..  +..+.|+||...-...
T Consensus       163 a~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~--~~l~~~~~--~~~~fD~Ii~DPP~f~  229 (317)
T d2b78a2         163 AMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVF--DYFKYARR--HHLTYDIIIIDPPSFA  229 (317)
T ss_dssp             HHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHH--HHHHHHHH--TTCCEEEEEECCCCC-
T ss_pred             HhCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHH--HHHHHHHh--hcCCCCEEEEcChhhc
Confidence            45677 59999998776665544432  21  46888888873  33444444  3346899999866543

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=83.36  E-value=2.9  Score=26.88  Aligned_cols=80  Identities=15%  Similarity=0.170  Sum_probs=45.5

Q ss_pred             CCCE-EEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHh-cccCCccEEEEcccccCCCCCCcccCCHHHH
Q 042200            5 HRAK-VIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDF-TKFGKLDIMFNNAGIISNMDRTTLDTDNEKV   82 (181)
Q Consensus         5 ~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~-~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~   82 (181)
                      .|++ |+.+++.+++......++..   .  ...|.++++ +.+.+++ .. .++|+++.+.|.             +.+
T Consensus        54 ~Ga~~vi~~~~~~e~~~~l~~~~ga---d--~vi~~~~~~-~~~~~~~~~~-~GvDvv~D~vGg-------------~~~  113 (187)
T d1vj1a2          54 LGCSRVVGICGTQEKCLFLTSELGF---D--AAVNYKTGN-VAEQLREACP-GGVDVYFDNVGG-------------DIS  113 (187)
T ss_dssp             TTCSEEEEEESSHHHHHHHHHHSCC---S--EEEETTSSC-HHHHHHHHCT-TCEEEEEESSCH-------------HHH
T ss_pred             cCCcceecccchHHHHhhhhhcccc---e--EEeeccchh-HHHHHHHHhc-cCceEEEecCCc-------------hhH
Confidence            6876 55556677777777777754   1  333555544 3444444 22 469999999983             234


Q ss_pred             HHhhheeecceeEEEecccccc
Q 042200           83 KRVMIMVVFLGVLLFTANLATE  104 (181)
Q Consensus        83 ~~~~~~n~~~~~iv~iss~~~~  104 (181)
                      +..++.--.+|+++.+.+.++.
T Consensus       114 ~~~~~~l~~~G~iv~~G~~s~~  135 (187)
T d1vj1a2         114 NTVISQMNENSHIILCGQISQY  135 (187)
T ss_dssp             HHHHTTEEEEEEEEEC------
T ss_pred             HHHhhhccccccEEEecccccc
Confidence            5555544448999988765543

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=82.87  E-value=3.3  Score=26.04  Aligned_cols=66  Identities=8%  Similarity=0.172  Sum_probs=44.7

Q ss_pred             cccCCC-EEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHH
Q 042200            2 FIQHRA-KVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNE   80 (181)
Q Consensus         2 l~~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~   80 (181)
                      |...|+ +|.++.|+.++.+++..++..  .       ..+.+++...+.     ..|+||++.+...+      -++.+
T Consensus        43 L~~~g~~~i~v~nRt~~ka~~l~~~~~~--~-------~~~~~~~~~~l~-----~~Divi~atss~~~------ii~~~  102 (159)
T d1gpja2          43 LVDRGVRAVLVANRTYERAVELARDLGG--E-------AVRFDELVDHLA-----RSDVVVSATAAPHP------VIHVD  102 (159)
T ss_dssp             HHHHCCSEEEEECSSHHHHHHHHHHHTC--E-------ECCGGGHHHHHH-----TCSEEEECCSSSSC------CBCHH
T ss_pred             HHhcCCcEEEEEcCcHHHHHHHHHhhhc--c-------cccchhHHHHhc-----cCCEEEEecCCCCc------cccHh
Confidence            456787 599999999999888887753  1       123455666665     37999999985433      25566


Q ss_pred             HHHHhhh
Q 042200           81 KVKRVMI   87 (181)
Q Consensus        81 ~~~~~~~   87 (181)
                      .++..+.
T Consensus       103 ~i~~~~~  109 (159)
T d1gpja2         103 DVREALR  109 (159)
T ss_dssp             HHHHHHH
T ss_pred             hhHHHHH
Confidence            6665543

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.23  E-value=4.2  Score=25.63  Aligned_cols=80  Identities=10%  Similarity=0.045  Sum_probs=46.7

Q ss_pred             cCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCCCCCCcccCCHHHHH
Q 042200            4 QHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISNMDRTTLDTDNEKVK   83 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~   83 (181)
                      ..|++|+++++++++.+. ++++..  . .  ..|.++.+-.+.+.+.....++|+++.+.|.             +.++
T Consensus        48 ~~g~~vi~~~~~~~~~~~-l~~~Ga--~-~--vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g~-------------~~~~  108 (183)
T d1pqwa_          48 MIGARIYTTAGSDAKREM-LSRLGV--E-Y--VGDSRSVDFADEILELTDGYGVDVVLNSLAG-------------EAIQ  108 (183)
T ss_dssp             HHTCEEEEEESSHHHHHH-HHTTCC--S-E--EEETTCSTHHHHHHHHTTTCCEEEEEECCCT-------------HHHH
T ss_pred             cccccceeeecccccccc-cccccc--c-c--cccCCccCHHHHHHHHhCCCCEEEEEecccc-------------hHHH
Confidence            568999999998877654 444433  1 2  2355554433444332333479999999982             1233


Q ss_pred             HhhheeecceeEEEecccc
Q 042200           84 RVMIMVVFLGVLLFTANLA  102 (181)
Q Consensus        84 ~~~~~n~~~~~iv~iss~~  102 (181)
                      ..++.--..|++|.++...
T Consensus       109 ~~~~~l~~~G~~v~~G~~~  127 (183)
T d1pqwa_         109 RGVQILAPGGRFIELGKKD  127 (183)
T ss_dssp             HHHHTEEEEEEEEECSCGG
T ss_pred             HHHHHhcCCCEEEEEccCC
Confidence            3333222278999886543

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=81.93  E-value=2.4  Score=27.10  Aligned_cols=57  Identities=14%  Similarity=0.115  Sum_probs=42.0

Q ss_pred             ccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEcccccCC
Q 042200            3 IQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGIISN   69 (181)
Q Consensus         3 ~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~~~   69 (181)
                      ...|++|.+.|.+.+++++.......  .+   ..-.++.+.+.+.+.+     -|+||.++-+...
T Consensus        52 ~~lGA~V~~~D~~~~~l~~l~~~~~~--~~---~~~~~~~~~l~~~~~~-----aDivI~aalipG~  108 (168)
T d1pjca1          52 VGLGAQVQIFDINVERLSYLETLFGS--RV---ELLYSNSAEIETAVAE-----ADLLIGAVLVPGR  108 (168)
T ss_dssp             HHTTCEEEEEESCHHHHHHHHHHHGG--GS---EEEECCHHHHHHHHHT-----CSEEEECCCCTTS
T ss_pred             hhCCCEEEEEeCcHHHHHHHHHhhcc--cc---eeehhhhhhHHHhhcc-----CcEEEEeeecCCc
Confidence            46799999999999988877665544  33   3335667777777763     6999999988765

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=80.52  E-value=1.6  Score=29.30  Aligned_cols=55  Identities=11%  Similarity=0.120  Sum_probs=37.4

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCC-CceEEEeeecCChhHHHHHHHhcccCCccEEEEccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSD-ELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAG   65 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag   65 (181)
                      |+++|.+|+.++.+++.++.+.+.+... .++.++..|+.+.+         ..++.|+|+...+
T Consensus        55 l~~~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~~---------~~~~fD~i~~~~~  110 (246)
T d1y8ca_          55 LCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLN---------INRKFDLITCCLD  110 (246)
T ss_dssp             HGGGSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCC---------CSCCEEEEEECTT
T ss_pred             HHHhCCccEeeccchhhhhhccccccccCccceeeccchhhhc---------ccccccccceeee
Confidence            6788999999999988776654443322 36888888886532         1146898885444

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=80.38  E-value=0.3  Score=31.98  Aligned_cols=82  Identities=10%  Similarity=0.006  Sum_probs=42.4

Q ss_pred             cCCCEEEEeecchHHHHH---HHhHcCCCCceEEEeeecCChhHHHHHHHh---cccCCccEEEEcccccCCCCCCcccC
Q 042200            4 QHRAKVIIADVQDDLCRA---LCKEFDSDELISYVCCNVTIDSDVKNVFDF---TKFGKLDIMFNNAGIISNMDRTTLDT   77 (181)
Q Consensus         4 ~~G~~Vv~~~r~~~~~~~---~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~---~~~~~id~vi~~ag~~~~~~~~~~~~   77 (181)
                      ..|++||.+.|+.+..++   .++++..   -..+.-|-.+..++...+.+   ...+++|+++.+.|..          
T Consensus        52 ~~Ga~vI~~v~~~~~~~~~~~~~~~lGa---d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~----------  118 (189)
T d1gu7a2          52 LLNFNSISVIRDRPNLDEVVASLKELGA---TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGK----------  118 (189)
T ss_dssp             HHTCEEEEEECCCTTHHHHHHHHHHHTC---SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHH----------
T ss_pred             hcCCeEEEEEecccccchHHhhhhhccc---cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcc----------
Confidence            468999998877554433   3445543   22232222222223333333   2335799999998732          


Q ss_pred             CHHHHHHhhheeecceeEEEeccc
Q 042200           78 DNEKVKRVMIMVVFLGVLLFTANL  101 (181)
Q Consensus        78 ~~~~~~~~~~~n~~~~~iv~iss~  101 (181)
                         .+...++.--..|++|.++..
T Consensus       119 ---~~~~~~~~l~~~G~~v~~G~~  139 (189)
T d1gu7a2         119 ---SSTGIARKLNNNGLMLTYGGM  139 (189)
T ss_dssp             ---HHHHHHHTSCTTCEEEECCCC
T ss_pred             ---hhhhhhhhhcCCcEEEEECCc
Confidence               122222221227899987654

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=80.35  E-value=1.6  Score=27.79  Aligned_cols=54  Identities=15%  Similarity=0.149  Sum_probs=34.7

Q ss_pred             cccCCCEEEEeecchHHHHHHHhHcCCCCceEEEeeecCChhHHHHHHHhcccCCccEEEEccccc
Q 042200            2 FIQHRAKVIIADVQDDLCRALCKEFDSDELISYVCCNVTIDSDVKNVFDFTKFGKLDIMFNNAGII   67 (181)
Q Consensus         2 l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~id~vi~~ag~~   67 (181)
                      |.+.|.+|.++.|+.++.++..+.+.....+..+.  ..+          ......|++||+....
T Consensus        37 l~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~--~~~----------~~~~~~dliIN~Tp~G   90 (170)
T d1nyta1          37 LLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALS--MDE----------LEGHEFDLIINATSSG   90 (170)
T ss_dssp             HHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECC--SGG----------GTTCCCSEEEECCSCG
T ss_pred             hcccceEEEeccchHHHHHHHHHHHhhcccccccc--ccc----------ccccccceeecccccC
Confidence            56778899999999999888877765422222222  111          0113579999998653