Citrus Sinensis ID: 042201

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-
MGQGRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQTNRQNY
cccccHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEcccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHcccccccccEEEEEccccccccccccccccccccccccccccccccccccccccccccccccEEccccccccccccccccccccccccccHHHHHHHHHcccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHcEcEcccccccccccccEcccccHHHcccccccEcccccccEEHHHHHHHHHHHHHHHHHcHHHHHHcccHHHHHHHHHHHHHHHHHcccEccEEEEEEccHHHHHcccccHHHccccccEEEEEccEccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccHHHccccHHHHcccHHHHHHHHHHHHHHHcccHHHHHHHHcccccccccEccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccEEEccccEEEEcccccHHHHHHHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHHHHcccccccccEcccccccccccEcHHHHccccccccccEcccccHHHHHcccccccccccccEcccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccc
MGQGRITRLGVWGLILWHFLARNkvtaidhegfcstTTFAYRDALGKAILFfegqrsgklpesqrvkwrgnsalsdgkpenvnliggyydagdnvkfgwpMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILrahtspttlytqvgdgnadhqcwerpedmdtprtlyritsdspgseAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFAdkhrgsyqascpfycsysgyQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEffggnkqlSLFKIHVESFVCAlmpesssvriettpggllyirdssnlqyvTSATLLLFLYSKTLNtahinglqcgsahfsaSQISAFAKSQVDyilgknpmkmsymagfgskfplqihhrgasipsigahpakvscndgyssyyhssnpnpnvhvgaivggpdsndqfkdlrtdyshaepttymnaafvgsvaplLAQSEQEYLHFFQTNRQNY
MGQGRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFegqrsgklpesqrvkwrgnsalsdgkpenVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQTNRQNY
MGQGRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGseaaaesaaalaaasIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGyssyyhssnpnpnVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQTNRQNY
*****ITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEG**************************NVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCW******************************ALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYH*******VHVGAIV***************YSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFF*******
**********VWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQ****************
MGQGRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRIT***************LAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQTNRQNY
***GRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQT*****
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iiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRRooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MGQGRITRLGVWGLILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQTNRQNY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query511 2.2.26 [Sep-21-2011]
P22503496 Endoglucanase OS=Phaseolu N/A no 0.945 0.973 0.724 0.0
Q9SUS0479 Endoglucanase 20 OS=Arabi yes no 0.906 0.966 0.726 0.0
Q9SZ90478 Endoglucanase 18 OS=Arabi no no 0.921 0.985 0.693 0.0
Q6ZA06516 Endoglucanase 20 OS=Oryza yes no 0.864 0.856 0.674 1e-178
Q8LQ92499 Endoglucanase 3 OS=Oryza no no 0.876 0.897 0.527 1e-140
Q6YXT7523 Endoglucanase 19 OS=Oryza no no 0.884 0.864 0.519 1e-140
Q9SRX3501 Endoglucanase 1 OS=Arabid no no 0.872 0.890 0.540 1e-140
P05522494 Endoglucanase 1 OS=Persea N/A no 0.935 0.967 0.504 1e-138
O81416516 Endoglucanase 17 OS=Arabi no no 0.872 0.864 0.518 1e-136
Q652F9497 Endoglucanase 17 OS=Oryza no no 0.892 0.917 0.512 1e-136
>sp|P22503|GUN_PHAVU Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2 Back     alignment and function desciption
 Score =  741 bits (1913), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/487 (72%), Positives = 414/487 (85%), Gaps = 4/487 (0%)

Query: 14  LILWH-FLARNKVTAIDHEGFCSTT---TFAYRDALGKAILFFEGQRSGKLPESQRVKWR 69
           + LW   +  N +  +D     S++    + Y DAL KAILFFEGQRSGKLP SQRVKWR
Sbjct: 10  VFLWSSMVCHNGLAMMDDGKLTSSSGPPNYDYADALAKAILFFEGQRSGKLPSSQRVKWR 69

Query: 70  GNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLR 129
            +SALSDGK +NVNL+GGYYDAGDNVKFGWPMA+S SLLSWAAVEY+ EISSVNQLGYL+
Sbjct: 70  EDSALSDGKLQNVNLMGGYYDAGDNVKFGWPMAFSTSLLSWAAVEYESEISSVNQLGYLQ 129

Query: 130 GAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAA 189
            AIRWG DF+LRAHTSPTTLYTQVGDGNADH CWERPEDMDTPRT+Y+I ++SPG+E AA
Sbjct: 130 SAIRWGADFMLRAHTSPTTLYTQVGDGNADHNCWERPEDMDTPRTVYKIDANSPGTEVAA 189

Query: 190 ESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELL 249
           E AAAL+AASIVFKK+D+ YSS LL+HSKSLF+FADK+RGSY  SCPFYCSYSGYQDELL
Sbjct: 190 EYAAALSAASIVFKKIDAKYSSTLLSHSKSLFDFADKNRGSYSGSCPFYCSYSGYQDELL 249

Query: 250 WAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFK 309
           WAAAWLYKAS ++KYL Y++SNQGWSQ  SEFSWDNKF GAQ LL +EF+GG K L+  K
Sbjct: 250 WAAAWLYKASGESKYLSYIISNQGWSQTVSEFSWDNKFVGAQTLLTEEFYGGKKDLAKIK 309

Query: 310 IHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGL 369
              ESF+CA+MP S+S +I+TTPGGLL+ RDSSNLQY TS+T++LF++S+ LN  HING+
Sbjct: 310 TDAESFICAVMPGSNSRQIKTTPGGLLFTRDSSNLQYTTSSTMVLFIFSRILNRNHINGI 369

Query: 370 QCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPA 429
            CGS+HF+ASQI  FAK+QV+YILGKNPMKMSYM GFGSK+P Q+HHRG+SIPSI  HPA
Sbjct: 370 NCGSSHFTASQIRGFAKTQVEYILGKNPMKMSYMVGFGSKYPKQLHHRGSSIPSIKVHPA 429

Query: 430 KVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSV 489
           KV CN G S YY+S+NPNPN HVGAIVGGPDSND+F D R+DYSHAEPTTY+NAAFV S+
Sbjct: 430 KVGCNAGLSDYYNSANPNPNTHVGAIVGGPDSNDRFNDARSDYSHAEPTTYINAAFVASI 489

Query: 490 APLLAQS 496
           + LLA++
Sbjct: 490 SALLAKT 496
Involved in ripening fruit process.
Phaseolus vulgaris (taxid: 3885)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 4
>sp|Q9SUS0|GUN20_ARATH Endoglucanase 20 OS=Arabidopsis thaliana GN=At4g23560 PE=2 SV=1 Back     alignment and function description
>sp|Q9SZ90|GUN18_ARATH Endoglucanase 18 OS=Arabidopsis thaliana GN=At4g09740 PE=2 SV=2 Back     alignment and function description
>sp|Q6ZA06|GUN20_ORYSJ Endoglucanase 20 OS=Oryza sativa subsp. japonica GN=GLU15 PE=2 SV=1 Back     alignment and function description
>sp|Q8LQ92|GUN3_ORYSJ Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1 Back     alignment and function description
>sp|Q6YXT7|GUN19_ORYSJ Endoglucanase 19 OS=Oryza sativa subsp. japonica GN=Os08g0114200 PE=2 SV=1 Back     alignment and function description
>sp|Q9SRX3|GUN1_ARATH Endoglucanase 1 OS=Arabidopsis thaliana GN=CEL2 PE=2 SV=1 Back     alignment and function description
>sp|P05522|GUN1_PERAE Endoglucanase 1 OS=Persea americana GN=CEL1 PE=2 SV=1 Back     alignment and function description
>sp|O81416|GUN17_ARATH Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1 Back     alignment and function description
>sp|Q652F9|GUN17_ORYSJ Endoglucanase 17 OS=Oryza sativa subsp. japonica GN=GLU13 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
575404508 cellulase [Sambucus nigra] 0.978 0.984 0.746 0.0
429326604509 korrigan [Populus tomentosa] 0.949 0.952 0.750 0.0
347466559509 endo-1,4-beta-glucanase [Populus trichoc 0.949 0.952 0.746 0.0
255537593518 endo-1,4-beta-glucanase, putative [Ricin 0.960 0.947 0.729 0.0
224053849483 predicted protein [Populus trichocarpa] 0.925 0.979 0.757 0.0
1346225496 RecName: Full=Endoglucanase; AltName: Fu 0.945 0.973 0.724 0.0
1039431496 cellulase [Phaseolus vulgaris] 0.945 0.973 0.724 0.0
225426144 753 PREDICTED: endoglucanase-like [Vitis vin 0.949 0.644 0.751 0.0
297742245503 unnamed protein product [Vitis vinifera] 0.954 0.970 0.748 0.0
228690495 abscission cellulase 0.943 0.973 0.716 0.0
>gi|575404|emb|CAA52343.1| cellulase [Sambucus nigra] Back     alignment and taxonomy information
 Score =  762 bits (1967), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/504 (74%), Positives = 424/504 (84%), Gaps = 4/504 (0%)

Query: 11  VWGLILWHFLARNKVT-AIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWR 69
           +WGL+LW   A   V  A + EG  S TT+ Y+DAL KAILFFEGQRSGKLP +QRVKWR
Sbjct: 3   IWGLLLWCAFASGMVGGAKEDEGLYSATTYDYKDALTKAILFFEGQRSGKLPTNQRVKWR 62

Query: 70  GNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLR 129
           G+SALSDGKP NVNL GGYYDAGDNVKFGWPMAY+VSLLSWAAVEY++EIS  NQL YL+
Sbjct: 63  GDSALSDGKPHNVNLTGGYYDAGDNVKFGWPMAYTVSLLSWAAVEYKQEISPTNQLRYLQ 122

Query: 130 GAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAA 189
            AIRWGT++ILRAHTS TTLYTQVGDGN+DHQCWERPEDMDTPRTLY+ITS SPG+E AA
Sbjct: 123 TAIRWGTNYILRAHTSSTTLYTQVGDGNSDHQCWERPEDMDTPRTLYKITSTSPGTEVAA 182

Query: 190 ESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELL 249
           ++AAALAAASIVF++VDS YS++LL HSK LF+FAD++RGSYQASCPFYCSYSGYQDELL
Sbjct: 183 DNAAALAAASIVFQEVDSNYSAKLLRHSKLLFQFADQYRGSYQASCPFYCSYSGYQDELL 242

Query: 250 WAAAWLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFK 309
           WAAAWLYKAS D  YL+YVL NQGWS   SEFSWDNKFAGAQ LLAKEFFGG   L  FK
Sbjct: 243 WAAAWLYKASGDATYLNYVLGNQGWSHAVSEFSWDNKFAGAQTLLAKEFFGGKTNLGKFK 302

Query: 310 IHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGL 369
              ESF+CALMP SSSV+I+TTPGGLLY RDSSNLQYVTSA+++  +YSK LN A+I G+
Sbjct: 303 SDSESFICALMPGSSSVQIQTTPGGLLYTRDSSNLQYVTSASMVFLIYSKILNAANIKGV 362

Query: 370 QCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPA 429
           QCGS +F  SQI AFAKSQVDYILG NPMKMSYM GFGSK+PLQ+HHRGASIPS+  HPA
Sbjct: 363 QCGSVNFPTSQIKAFAKSQVDYILGNNPMKMSYMVGFGSKYPLQLHHRGASIPSMQIHPA 422

Query: 430 KVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSV 489
           +V CN+GYS++Y SS  NPN HVGAIVGGP+SNDQF D+R+DYSH E TTYMNAAFVGSV
Sbjct: 423 RVGCNEGYSAWYSSSKSNPNTHVGAIVGGPNSNDQFNDVRSDYSHLETTTYMNAAFVGSV 482

Query: 490 APLLA-QSEQEY--LHFFQTNRQN 510
           A L+   S +EY  LH   T   N
Sbjct: 483 AALVGDNSIREYMMLHINTTTMVN 506

Source: Sambucus nigra

Species: Sambucus nigra

Genus: Sambucus

Family: Adoxaceae

Order: Dipsacales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|429326604|gb|AFZ78642.1| korrigan [Populus tomentosa] Back     alignment and taxonomy information
>gi|347466559|gb|AEO97192.1| endo-1,4-beta-glucanase [Populus trichocarpa] gi|347466613|gb|AEO97219.1| endo-1,4-beta-glucanase [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255537593|ref|XP_002509863.1| endo-1,4-beta-glucanase, putative [Ricinus communis] gi|223549762|gb|EEF51250.1| endo-1,4-beta-glucanase, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224053849|ref|XP_002298010.1| predicted protein [Populus trichocarpa] gi|222845268|gb|EEE82815.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|1346225|sp|P22503.2|GUN_PHAVU RecName: Full=Endoglucanase; AltName: Full=Abscission cellulase; AltName: Full=Endo-1,4-beta-glucanase; Flags: Precursor gi|349601|gb|AAA02563.1| cellulase precursor [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|1039431|gb|AAC78504.1| cellulase [Phaseolus vulgaris] Back     alignment and taxonomy information
>gi|225426144|ref|XP_002272935.1| PREDICTED: endoglucanase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|297742245|emb|CBI34394.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|228690|prf||1808320A abscission cellulase Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query511
TAIR|locus:2128394479 GH9B15 "glycosyl hydrolase 9B1 0.906 0.966 0.678 1.1e-174
TAIR|locus:2118519478 GH9B14 "glycosyl hydrolase 9B1 0.906 0.968 0.672 1.1e-172
TAIR|locus:2024670501 CEL2 "cellulase 2" [Arabidopsi 0.878 0.896 0.503 1.3e-125
TAIR|locus:2137824516 GH9B13 "glycosyl hydrolase 9B1 0.872 0.864 0.483 2.8e-121
TAIR|locus:2101099486 GH9A4 "glycosyl hydrolase 9A4" 0.896 0.942 0.482 1.4e-117
TAIR|locus:2028441 627 GH9C1 "glycosyl hydrolase 9C1" 0.900 0.733 0.475 1.5e-113
TAIR|locus:2017704484 CEL5 "cellulase 5" [Arabidopsi 0.870 0.919 0.470 5.2e-113
TAIR|locus:2014205 620 GH9C2 "glycosyl hydrolase 9C2" 0.896 0.738 0.456 5.9e-112
TAIR|locus:2825314484 CEL3 "cellulase 3" [Arabidopsi 0.868 0.917 0.469 5.9e-112
TAIR|locus:2136073 626 GH9C3 "glycosyl hydrolase 9C3" 0.884 0.722 0.458 4.2e-111
TAIR|locus:2128394 GH9B15 "glycosyl hydrolase 9B15" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1697 (602.4 bits), Expect = 1.1e-174, P = 1.1e-174
 Identities = 315/464 (67%), Positives = 363/464 (78%)

Query:    33 FCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAG 92
             F S     Y DAL K+ILFFEGQRSGKLP +QRVKWR +SALSDG   NVNLIGGYYDAG
Sbjct:    16 FESLEALEYGDALNKSILFFEGQRSGKLPTNQRVKWRADSALSDGSLANVNLIGGYYDAG 75

Query:    93 DNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQ 152
             DNVKF WPM+++ +LLSWAA+EYQ EISSVNQLGYLR  I+WGTDFILRAHTSP  LYTQ
Sbjct:    76 DNVKFVWPMSFTTTLLSWAAIEYQNEISSVNQLGYLRSTIKWGTDFILRAHTSPNMLYTQ 135

Query:   153 VGDGNADHQCWERPEDMDTPRTLYRITSDSPGXXXXXXXXXXXXXXXIVFKKVDSIYSSR 212
             VGDGN+DH CWERPEDMDT RTLY I+S SPG               +VFK VDS YSS 
Sbjct:   136 VGDGNSDHSCWERPEDMDTSRTLYSISSSSPGSEAAGEAAAALAAASLVFKSVDSTYSST 195

Query:   213 LLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQ 272
             LLNH+K+LFEFADK+RGSYQASCPFYCSYSGYQDELLWAAAWLYKA+ D  Y++YV+SN+
Sbjct:   196 LLNHAKTLFEFADKYRGSYQASCPFYCSYSGYQDELLWAAAWLYKATGDKIYINYVISNK 255

Query:   273 GWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTP 332
              WSQ  +EFSWDNKF GAQ LL  EF+ G   L+ FK  VESFVCA+MP SSS +I+ TP
Sbjct:   256 DWSQAVNEFSWDNKFVGAQALLVSEFYNGANDLAKFKSDVESFVCAMMPGSSSQQIKPTP 315

Query:   333 GGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYI 392
             GGLL+IRDSSNLQYVT+AT +LF YSKTL  A +  +QCGS  F+ SQI  FAKSQVDYI
Sbjct:   316 GGLLFIRDSSNLQYVTTATTVLFHYSKTLTKAGVGSIQCGSTKFTVSQIRNFAKSQVDYI 375

Query:   393 LGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGXXXXXXXXXXXXXVHV 452
             LG NPMKMSYM GFG+K+P Q HHRG+S+PSI + P K+ CN G             VH+
Sbjct:   376 LGNNPMKMSYMVGFGTKYPTQPHHRGSSLPSIQSKPEKIDCNGGYSYYNSDTPNPN-VHI 434

Query:   453 GAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQS 496
             GAIVGGP+S+DQ+ D ++DYSHAEPTTY+NAAF+G VA L++ S
Sbjct:   435 GAIVGGPNSSDQYSDKKSDYSHAEPTTYINAAFIGPVAALISSS 478
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005576 "extracellular region" evidence=ISM
GO:0005975 "carbohydrate metabolic process" evidence=IEA
TAIR|locus:2118519 GH9B14 "glycosyl hydrolase 9B14" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2024670 CEL2 "cellulase 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2137824 GH9B13 "glycosyl hydrolase 9B13" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2101099 GH9A4 "glycosyl hydrolase 9A4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2028441 GH9C1 "glycosyl hydrolase 9C1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2017704 CEL5 "cellulase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2014205 GH9C2 "glycosyl hydrolase 9C2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2825314 CEL3 "cellulase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2136073 GH9C3 "glycosyl hydrolase 9C3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
P22503GUN_PHAVU3, ., 2, ., 1, ., 40.72480.94520.9737N/Ano
Q6ZA06GUN20_ORYSJ3, ., 2, ., 1, ., 40.67490.86490.8565yesno
P05522GUN1_PERAE3, ., 2, ., 1, ., 40.50400.93540.9676N/Ano
Q9SUS0GUN20_ARATH3, ., 2, ., 1, ., 40.72620.90600.9665yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.40.991
3rd Layer3.2.10.976

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
PLN02613498 PLN02613, PLN02613, endoglucanase 0.0
pfam00759437 pfam00759, Glyco_hydro_9, Glycosyl hydrolase famil 0.0
PLN02266510 PLN02266, PLN02266, endoglucanase 0.0
PLN02909486 PLN02909, PLN02909, Endoglucanase 0.0
PLN02308492 PLN02308, PLN02308, endoglucanase 0.0
PLN02340 614 PLN02340, PLN02340, endoglucanase 0.0
PLN00119489 PLN00119, PLN00119, endoglucanase 0.0
PLN02171 629 PLN02171, PLN02171, endoglucanase 0.0
PLN02345469 PLN02345, PLN02345, endoglucanase 0.0
PLN03009495 PLN03009, PLN03009, cellulase 1e-175
PLN02420525 PLN02420, PLN02420, endoglucanase 1e-168
PLN02175484 PLN02175, PLN02175, endoglucanase 1e-164
>gnl|CDD|215331 PLN02613, PLN02613, endoglucanase Back     alignment and domain information 
 Score =  868 bits (2244), Expect = 0.0
 Identities = 372/487 (76%), Positives = 418/487 (85%), Gaps = 8/487 (1%)

Query: 14  LILWHFLARNKVTAIDHEGFCSTTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSA 73
           +++  FLA   + A++           Y DAL K+ILFFEGQRSGKLP +QRVKWR +SA
Sbjct: 8   MLVGMFLAFESLVALESPD--------YGDALNKSILFFEGQRSGKLPTNQRVKWRADSA 59

Query: 74  LSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIR 133
           LSDGKPENVNL GGYYDAGDNVKFGWPMA++V+LLSWAA+EYQ EISSVNQLGYLR AIR
Sbjct: 60  LSDGKPENVNLTGGYYDAGDNVKFGWPMAFTVTLLSWAAIEYQNEISSVNQLGYLRSAIR 119

Query: 134 WGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAA 193
           WGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLY+ITS SPGSEAA E+AA
Sbjct: 120 WGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITSSSPGSEAAGEAAA 179

Query: 194 ALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAA 253
           ALAAAS+VFK VDS YSS+LLNH++SLFEFADK+RGSYQASCPFYCSYSGYQDELLWAAA
Sbjct: 180 ALAAASLVFKDVDSSYSSKLLNHARSLFEFADKYRGSYQASCPFYCSYSGYQDELLWAAA 239

Query: 254 WLYKASEDNKYLDYVLSNQGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVE 313
           WLYKA+ + KYL+YV+SN+GWSQ  +EFSWDNKFAGAQ LLA EF+GG   L+ FK  VE
Sbjct: 240 WLYKATGEKKYLNYVISNKGWSQAVNEFSWDNKFAGAQALLASEFYGGANDLAKFKTDVE 299

Query: 314 SFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGS 373
           SFVCALMP SSSV+I+TTPGGLL+ RDSSNLQYVT+AT +LF+YSKTL  A + G+QCGS
Sbjct: 300 SFVCALMPGSSSVQIKTTPGGLLFTRDSSNLQYVTTATTVLFIYSKTLTKAGVGGIQCGS 359

Query: 374 AHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSC 433
           A FSASQI  FAKSQVDYILG NPMKMSYM GFG+K+P QIHHRG+SIPSI   P KV C
Sbjct: 360 AQFSASQIRNFAKSQVDYILGNNPMKMSYMVGFGTKYPTQIHHRGSSIPSIQVLPEKVDC 419

Query: 434 NDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLL 493
           N G+SSYY+S  PNPNVHVGAIVGGPDSNDQ+ D R+DYSHAEPTTY+NAAFVGSVA L+
Sbjct: 420 NGGFSSYYNSDTPNPNVHVGAIVGGPDSNDQYSDKRSDYSHAEPTTYINAAFVGSVAALI 479

Query: 494 AQSEQEY 500
            Q  +  
Sbjct: 480 KQVSRLE 486

Length = 498
>gnl|CDD|216104 pfam00759, Glyco_hydro_9, Glycosyl hydrolase family 9 Back     alignment and domain information
>gnl|CDD|215150 PLN02266, PLN02266, endoglucanase Back     alignment and domain information
>gnl|CDD|178497 PLN02909, PLN02909, Endoglucanase Back     alignment and domain information
>gnl|CDD|177943 PLN02308, PLN02308, endoglucanase Back     alignment and domain information
>gnl|CDD|215194 PLN02340, PLN02340, endoglucanase Back     alignment and domain information
>gnl|CDD|177732 PLN00119, PLN00119, endoglucanase Back     alignment and domain information
>gnl|CDD|215115 PLN02171, PLN02171, endoglucanase Back     alignment and domain information
>gnl|CDD|177979 PLN02345, PLN02345, endoglucanase Back     alignment and domain information
>gnl|CDD|166650 PLN03009, PLN03009, cellulase Back     alignment and domain information
>gnl|CDD|178040 PLN02420, PLN02420, endoglucanase Back     alignment and domain information
>gnl|CDD|177832 PLN02175, PLN02175, endoglucanase Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 511
PLN02266510 endoglucanase 100.0
PLN02909486 Endoglucanase 100.0
PLN02613498 endoglucanase 100.0
PLN02340 614 endoglucanase 100.0
PLN02420525 endoglucanase 100.0
PLN02308492 endoglucanase 100.0
PLN00119489 endoglucanase 100.0
PLN02175484 endoglucanase 100.0
PLN02171 629 endoglucanase 100.0
PLN02345469 endoglucanase 100.0
PLN03009495 cellulase 100.0
PF00759444 Glyco_hydro_9: Glycosyl hydrolase family 9; InterP 100.0
COG1331667 Highly conserved protein containing a thioredoxin 97.36
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 97.21
KOG2787403 consensus Lanthionine synthetase C-like protein 1 96.12
cd00249384 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase d 94.78
PF07944520 DUF1680: Putative glycosyl hydrolase of unknown fu 94.66
PF03663370 Glyco_hydro_76: Glycosyl hydrolase family 76 ; Int 94.0
PF07221346 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcN 91.94
COG3533 589 Uncharacterized protein conserved in bacteria [Fun 86.78
>PLN02266 endoglucanase Back     alignment and domain information 
Probab=100.00  E-value=5.5e-124  Score=991.72  Aligned_cols=486  Identities=51%  Similarity=0.961  Sum_probs=441.0

Q ss_pred             hhHHHHHHHHHHH-HhhcCcccccCCCCcCC-----CchHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCC
Q 042201            6 ITRLGVWGLILWH-FLARNKVTAIDHEGFCS-----TTTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKP   79 (511)
Q Consensus         6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~w~~~s~~~Dg~~   79 (511)
                      +-|||+.-+  |+ +|| +++.+.+...|-+     |.+++|.++|++||+||++||||++|+.++++||++|++.|+.+
T Consensus         9 ~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~aL~~sl~fy~~QRsG~lp~~~~~~Wr~ds~~~Dg~~   85 (510)
T PLN02266          9 LLRLFIFLA--FSLLLC-NGFSSSSNNPFHHRHHPRLASHNYRDALTKSILFFEGQRSGKLPSSQRMTWRRDSGLSDGSA   85 (510)
T ss_pred             HHHHHHHHH--HHHHhc-CCCccccCCcccccCCCCCCcchHHHHHHHHHHHHHHhcCcCCCcccCCCCcccCCCCCCCc
Confidence            445554322  33 445 5566666655543     89999999999999999999999999999999999999999999


Q ss_pred             CccccccceecCCCCcccccchHHHHHHHHHHHHHcHHHHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCC
Q 042201           80 ENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNAD  159 (511)
Q Consensus        80 ~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~~~~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~d  159 (511)
                      .++||+|||||||||+||++|+++|+++|+|+++||++.+.  +++||||||||||+|||||||+.+|.||+|||++++|
T Consensus        86 ~~~DlsGGwyDAGD~~Kf~~p~a~s~t~L~w~~~ef~~~~~--~~~pd~Ldelkw~~D~llk~~~~~~~vy~qVg~~~~D  163 (510)
T PLN02266         86 MHVDLVGGYYDAGDNVKFGFPMAFTTTMLSWSVIEFGGLMK--SELQNAKDAIRWATDYLLKATAHPDTIYVQVGDANKD  163 (510)
T ss_pred             CcccCCCcceeCCCCceecchHHHHHHHHHHHHHhhhhccc--cccHHHHHHHHHHHHHHHHhccCCCeEEEEeCCCCCC
Confidence            99999999999999999999999999999999999999984  7999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccC-----C
Q 042201          160 HQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA-----S  234 (511)
Q Consensus       160 h~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~-----~  234 (511)
                      |.+|++||+++.+|++|.|+.++|||++++++|||||+||||||++||+||++||++||++|+||+++|+.|.+     .
T Consensus       164 h~~W~~Pe~~~~~R~~y~i~~~~pgsd~a~e~AAALAaas~vfk~~D~~yA~~~L~~Ak~ly~fa~~~~g~y~~~~~~~~  243 (510)
T PLN02266        164 HACWERPEDMDTPRSVFKVDKNTPGSDVAAETAAALAAASLVFRKSDPTYSKLLVRRAIRVFQFADKYRGAYSNGLKPDV  243 (510)
T ss_pred             cccCCChhhcCCCCeeEEeCCCCCchHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHhCCCCccCCCCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998765     2


Q ss_pred             CCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHcc---CCCCCCcccCcChhhHHHHhhccccccCCchH-HHHHHH
Q 042201          235 CPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQ---GWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQ-LSLFKI  310 (511)
Q Consensus       235 ~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~---~~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~-~~~~~~  310 (511)
                      +++|.+.+++.||++|||+|||++|||++|+++++.+.   +.......++||++..|+++||++++..+..+ ++.+++
T Consensus       244 ~~~y~s~s~~~DEl~WAAawLy~ATGd~~Yl~~~~~~~~~~g~~~~~~~~~WD~k~~ga~vLLa~~~~~~~~~~~~~yk~  323 (510)
T PLN02266        244 CPFYCSYSGYQDELLWGAAWLHKATKNPTYLNYIQVNGQILGADEFDNTFGWDNKHVGARILLSKAFLVQKVQSLHEYKG  323 (510)
T ss_pred             CCCcccCCcchHHHHHHHHHHHHHhCCHHHHHHHHHHHhhccccccCCccCcchhHHHHHHHHHHHHhhcchHHHHHHHH
Confidence            47888768899999999999999999999999998754   11223468999999999999998865433223 788999


Q ss_pred             HHHHHHHhhcCCCCCcccccCCCCceeecCCChHHHHHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccc
Q 042201          311 HVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVD  390 (511)
Q Consensus       311 ~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w~n~~~a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qld  390 (511)
                      .++.++|.+.+++|+..+++||+|+.|..+|+|+||+++++||+++|++++...+ .++.||+......+|+++|++|||
T Consensus       324 ~~d~~~~~~~~~~~~~~~~~TpGGL~~~~~wg~lrYa~~~afla~vya~~l~~~~-~~~~cg~~~~~~~~~~~fA~~Qid  402 (510)
T PLN02266        324 HADNFICSVIPGAPFSSTQYTPGGLLFKMSDSNMQYVTSTSFLLLTYAKYLTSAK-TVVNCGGTVVTPARLRSIAKKQVD  402 (510)
T ss_pred             HHHHHHHhccCCCCCCccccCCCeeEEeCCCCcHHHHHHHHHHHHHHHHHHHhcC-CceecCCCccCHHHHHHHHHhhhc
Confidence            9999999998888887889999999999999999999999999999999987654 467788766788999999999999


Q ss_pred             hhccCCCCCcceEeecCCCCCCCccccCCCCCCCCCCCCccccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcC
Q 042201          391 YILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRT  470 (511)
Q Consensus       391 YlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~  470 (511)
                      ||||+||+++|||||||.|+|++||||++|||++..+|.+.+|.+|+. +++++.|||++|.||||||||.+|.|.|+|.
T Consensus       403 YiLG~NP~~~SyvVG~G~~~P~~pHHR~as~p~~~~~~~~~~C~~g~~-~~~~~~~n~~vL~GAlVGGPd~~D~y~D~r~  481 (510)
T PLN02266        403 YLLGDNPLKMSYMVGYGPRYPRRIHHRGSSLPSVAAHPAKIQCSQGFS-IMNSQSPNPNVLVGAVVGGPDQHDRFPDERS  481 (510)
T ss_pred             eeccCCCCCCceEEecCCCCCccccccCCCCCCcccCccccCCCCCcc-ccCCCCCCcceecceeecCCCCCCCCCcccc
Confidence            999999999999999999999999999999999988999999999987 8999999999999999999999999999999


Q ss_pred             ccccCcccccCchHHHHHHhHhhccCCc
Q 042201          471 DYSHAEPTTYMNAAFVGSVAPLLAQSEQ  498 (511)
Q Consensus       471 ~y~~nEvaid~NA~~v~~la~l~~~~~~  498 (511)
                      +|++|||||||||+||++||+|.+.+++
T Consensus       482 ~y~~nEva~dyNA~~vgalA~l~~~yg~  509 (510)
T PLN02266        482 DYEQSEPATYINAPLVGALAYLAHSYGQ  509 (510)
T ss_pred             ccccCcceeecchHHHHHHHHHHHHhcC
Confidence            9999999999999999999999976543

>PLN02909 Endoglucanase Back     alignment and domain information
>PLN02613 endoglucanase Back     alignment and domain information
>PLN02340 endoglucanase Back     alignment and domain information
>PLN02420 endoglucanase Back     alignment and domain information
>PLN02308 endoglucanase Back     alignment and domain information
>PLN00119 endoglucanase Back     alignment and domain information
>PLN02175 endoglucanase Back     alignment and domain information
>PLN02171 endoglucanase Back     alignment and domain information
>PLN02345 endoglucanase Back     alignment and domain information
>PLN03009 cellulase Back     alignment and domain information
>PF00759 Glyco_hydro_9: Glycosyl hydrolase family 9; InterPro: IPR001701 O-Glycosyl hydrolases 3 Back     alignment and domain information
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>KOG2787 consensus Lanthionine synthetase C-like protein 1 [Defense mechanisms] Back     alignment and domain information
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid Back     alignment and domain information
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function Back     alignment and domain information
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5 Back     alignment and domain information
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
1ks8_A433 The Structure Of Endoglucanase From Termite, Nasuti 2e-84
1js4_A 605 EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Le 6e-76
2xfg_A466 Reassembly And Co-Crystallization Of A Family 9 Pro 1e-69
4dod_A475 The Structure Of Cbescii Cela Gh9 Module Length = 4 1e-66
1k72_A 614 The X-ray Crystal Structure Of Cel9g Complexed With 1e-57
1ga2_A 614 The Crystal Structure Of Endoglucanase 9g From Clos 1e-57
1ia6_A441 Crystal Structure Of The Cellulase Cel9m Of C. Cell 1e-55
2yik_A611 Catalytic Domain Of Clostridium Thermocellum Celt L 3e-45
3ez8_A537 Crystal Structure Of Endoglucanase Cel9a From The T 4e-10
1clc_A639 Three-Dimensional Structure Of Endoglucanase D At 1 9e-04
>pdb|1KS8|A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. Length = 433 Back     alignment and structure 
Iteration: 1

 Score =  309 bits (791), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 181/463 (39%), Positives = 253/463 (54%), Gaps = 42/463 (9%)
Query: 39  FAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFG 98
           + Y+  L  ++LF+E QRSG+LP  Q+V WR +SAL+D   +  +L GGY+DAGD VKFG
Sbjct: 3   YDYKQVLRDSLLFYEAQRSGRLPADQKVTWRKDSALNDQGDQGQDLTGGYFDAGDFVKFG 62
Query: 99  WPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNA 158
           +PMAY+ ++L+W  ++++   SS   L   R A++W TD+ ++AHTS    Y QVG G+A
Sbjct: 63  FPMAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQNEFYGQVGQGDA 122
Query: 159 DHQCWERPEDMDTPRTLYRITSDSPGXXXXXXXXXXXXXXXIVFKKVDSIYSSRLLNHSK 218
           DH  W RPEDM   R  Y+I +  PG               IVF+ VD  YS+ LL H++
Sbjct: 123 DHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHAR 182
Query: 219 SLFEFADKHRGSYQASCP----FYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLS---N 271
            LF+FA+ +RG Y  S      FY S + Y+DEL+WAAAWLY+A+ DN YL+   S    
Sbjct: 183 QLFDFANNYRGKYSDSITDARNFYAS-ADYRDELVWAAAWLYRATNDNTYLNTAESLYDE 241
Query: 272 QGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETT 331
            G        +WD+K +G Q+LLAK     NKQ   +K  V+S+V  L+        + T
Sbjct: 242 FGLQNWGGGLNWDSKVSGVQVLLAKL---TNKQ--AYKDTVQSYVNYLINNQ-----QKT 291
Query: 332 PGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDY 391
           P GLLYI     L++  +A  ++              L+      SAS    FA++Q+DY
Sbjct: 292 PKGLLYIDMWGTLRHAANAAFIM--------------LEAAELGLSASSYRQFAQTQIDY 337
Query: 392 ILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGXXXXXXXXXXXXXVH 451
            LG      S++ GFGS  P + HHR +S P     PA  +C+               V 
Sbjct: 338 ALGDG--GRSFVCGFGSNPPTRPHHRSSSCP-----PAPATCD---WNTFNSPDPNYHVL 387
Query: 452 VGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLA 494
            GA+VGGPD ND + D R+DY H E  T  NA F  ++A L+A
Sbjct: 388 SGALVGGPDQNDNYVDDRSDYVHNEVATDYNAGFQSALAALVA 430
>pdb|1JS4|A Chain A, EndoEXOCELLULASE:CELLOBIOSE FROM THERMOMONOSPORA Length = 605 Back     alignment and structure
>pdb|2XFG|A Chain A, Reassembly And Co-Crystallization Of A Family 9 Processive Endoglucanase From Separately Expressed Gh9 And Cbm3c Modules Length = 466 Back     alignment and structure
>pdb|4DOD|A Chain A, The Structure Of Cbescii Cela Gh9 Module Length = 475 Back     alignment and structure
>pdb|1K72|A Chain A, The X-ray Crystal Structure Of Cel9g Complexed With Cellotriose Length = 614 Back     alignment and structure
>pdb|1GA2|A Chain A, The Crystal Structure Of Endoglucanase 9g From Clostridium Cellulolyticum Complexed With Cellobiose Length = 614 Back     alignment and structure
>pdb|1IA6|A Chain A, Crystal Structure Of The Cellulase Cel9m Of C. Cellulolyticum Length = 441 Back     alignment and structure
>pdb|2YIK|A Chain A, Catalytic Domain Of Clostridium Thermocellum Celt Length = 611 Back     alignment and structure
>pdb|3EZ8|A Chain A, Crystal Structure Of Endoglucanase Cel9a From The Thermoacidophilic Alicyclobacillus Acidocaldarius Length = 537 Back     alignment and structure
>pdb|1CLC|A Chain A, Three-Dimensional Structure Of Endoglucanase D At 1.9 Angstroms Resolution Length = 639 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query511
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 1e-170
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 1e-170
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 1e-168
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 1e-167
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 1e-162
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 1e-156
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 1e-150
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 1e-141
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 1e-128
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 7e-73
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-04
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Length = 605 Back     alignment and structure
 Score =  493 bits (1270), Expect = e-170
 Identities = 175/481 (36%), Positives = 250/481 (51%), Gaps = 43/481 (8%)

Query: 39  FAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFG 98
           F Y +AL K++ F+E QRSGKLPE+ RV WRG+S L+DG    ++L GG+YDAGD+VKFG
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 99  WPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNA 158
           +PMA++ ++L+W A+E         Q+ YL+  +RW  D+ ++AH SP  LY QVGDG+A
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 159 DHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSK 218
           DH+ W   E M   R  +++    PGS+ AAE+AAA+AA+SIVF   D  Y++ L+ H+K
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 219 SLFEFADKHRGSYQASCP---FYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSN---- 271
            L+ FAD +RG Y    P   FY S+SGYQDEL+W A WLYKA+ D+ YL          
Sbjct: 184 QLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFL 243

Query: 272 -----QGWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSV 326
                          +WD+K  G  +LLAKE          +      ++       +  
Sbjct: 244 STEQQTDLRSYRWTIAWDDKSYGTYVLLAKET-----GKQKYIDDANRWLDYWTVGVNGQ 298

Query: 327 RIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAK 386
           R+  +PGG+  +     L+Y  +   +  +Y+K ++                 +   FA 
Sbjct: 299 RVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP-----------VRKQRYHDFAV 347

Query: 387 SQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNP 446
            Q++Y LG NP   SY+ GFG+  P   HHR A                 ++    S   
Sbjct: 348 RQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGS--------------WTDSIASPAE 393

Query: 447 NPNVHVGAIVGGPDS-NDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSEQEYLHFFQ 505
           N +V  GA+VGGP S ND + D R DY   E  T  NA F  ++A L+ +     L  F 
Sbjct: 394 NRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYGGTPLADFP 453

Query: 506 T 506
            
Sbjct: 454 P 454
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Length = 433 Back     alignment and structure
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Length = 466 Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Length = 614 Back     alignment and structure
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Length = 441 Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Length = 611 Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Length = 537 Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Length = 639 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Length = 609 Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Length = 586 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query511
1ia6_A441 Cellulase CEL9M; cellullase, alpha barrel, hydrola 100.0
2xfg_A466 Endoglucanase 1; hydrolase-sugar binding protein c 100.0
1ks8_A433 Endo-B-1,4-glucanase; cellulase, endoglucanase, te 100.0
1tf4_A 605 T. fusca endo/EXO-cellulase E4 catalytic domain an 100.0
2yik_A611 Endoglucanase; hydrolase; 2.10A {Clostridium therm 100.0
1g87_A 614 Endocellulase 9G; endoglucanase, cellulose binding 100.0
3gzk_A537 Cellulase; fold from GH9 from CAZY database, glyco 100.0
1clc_A639 Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycos 100.0
1ut9_A609 Cellulose 1,4-beta-cellobiosidase; hydrolase, glyc 100.0
3h7l_A586 Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, stru 100.0
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 95.85
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.67
2gz6_A388 N-acetyl-D-glucosamine 2-epimerase; anabaena SP. C 95.55
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 95.49
3gt5_A402 N-acetylglucosamine 2-epimerase; structural genomi 93.25
2zzr_A397 Unsaturated glucuronyl hydrolase; alpha barrel; 1. 93.03
2ahf_A377 Unsaturated glucuronyl hydrolase; alpha6/alpha6 ba 91.84
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 90.44
3k11_A445 Putative glycosyl hydrolase; structural genomics, 88.52
1nc5_A373 Hypothetical protein YTER; structural genomics, he 88.22
3k7x_A349 LIN0763 protein; Q92DQ0, LKR23, NESG, structural g 87.81
1fp3_A402 N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barr 85.76
3pmm_A382 Putative cytoplasmic protein; structural genomics, 85.1
2zbl_A421 Putative isomerase; N-acyl-D-glucosamine 2-epimera 80.28
3k11_A445 Putative glycosyl hydrolase; structural genomics, 80.01
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A* Back     alignment and structure
Probab=100.00  E-value=7.5e-112  Score=898.66  Aligned_cols=420  Identities=33%  Similarity=0.621  Sum_probs=379.6

Q ss_pred             chHHHHHHHHHHHHHHHHhhcCCCCC-CCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHc
Q 042201           37 TTFAYRDALGKAILFFEGQRSGKLPE-SQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEY  115 (511)
Q Consensus        37 ~~~~Y~~~l~~sl~fy~~QR~G~lp~-~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~  115 (511)
                      +.++|.++|++||+||++||||++|+ .++++||++||+.||.+.++||+|||||||||+||++|+++|+++|+|+++||
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~~~~~~~~~wr~~shl~Dg~~~~~Dl~GGwyDAGD~~Ky~~p~a~t~~~L~w~~~e~   81 (441)
T 1ia6_A            2 GTHDYSTALKDSIIFFDANKCGPQAGENNVFDWRGACHTTDGSDVGVDLTGGYHDAGDHVKFGLPQGYSAAILGWSLYEF   81 (441)
T ss_dssp             CCCCHHHHHHHHHHGGGGGBCBTTTTTTCSCTTCCCBCTTTTTTTTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHC
T ss_pred             ccchHHHHHHHHHHHHHHHcCCCCCCcccCCCCCCCCCccccCCCcccCCCCeeeCCCCCeeccchHHHHHHHHHHHHHh
Confidence            45789999999999999999999887 89999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceE-EEeCCCCcchHHHHHHHHH
Q 042201          116 QREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTL-YRITSDSPGSEAAAESAAA  194 (511)
Q Consensus       116 ~~~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~-~~~~~~~p~s~~a~~~AAa  194 (511)
                      ++.|++.+++||||||||||+|||||||+++|.||+|||++..||.+|++||+++.+|++ |.++.++|+|++++++|||
T Consensus        82 ~~~~~~~g~~~d~ldeikwg~D~llk~~~~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAa  161 (441)
T 1ia6_A           82 KESFDATGNTTKMLQQLKYFTDYFLKSHPNSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAA  161 (441)
T ss_dssp             HHHHHHTTCHHHHHHHHHHHHHHHHHTCCSTTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHH
T ss_pred             HHHHhhcCcHHHHHHHHHHHHHHHHHhccCCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999999999999 9999999999999999999


Q ss_pred             HHHhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccCCCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccCC
Q 042201          195 LAAASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQASCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQGW  274 (511)
Q Consensus       195 lA~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~~  274 (511)
                      ||+||||||++||+||++||++||++|+||++||+.+. .+++|++ +++.||++|||+|||++||+++|+++++++...
T Consensus       162 lAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~~~g~~~-~~~~Y~s-s~~~DE~~WAAa~Ly~aTgd~~Yl~~a~~~~~~  239 (441)
T 1ia6_A          162 LTLMYLNYKNIDSAYATKCLNAAKELYAMGKANQGVGN-GQSFYQA-TSFGDDLAWAATWLYTATNDSTYITDAEQFITL  239 (441)
T ss_dssp             HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCSCCC-CTTTSCC-CCSHHHHHHHHHHHHHHHCCTHHHHHHHHHTTC
T ss_pred             HHHHHHhccccCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCCCCC-CCchhHHHHHHHHHHHHhCCHHHHHHHHHHHhh
Confidence            99999999999999999999999999999999998765 5789999 999999999999999999999999999886421


Q ss_pred             C--------CCCcccCcChhhHHHHhhccccccCCchHHHHHHHHHHHHHHhhcCCCCCcccccCCCCceeecCCChHHH
Q 042201          275 S--------QVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNLQY  346 (511)
Q Consensus       275 ~--------~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w~n~~~  346 (511)
                      .        .....|+||++..++++||++.  .++   +.+++.++.+++.++     .+++++|+|+.|...||++++
T Consensus       240 ~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~---~~~~~~~~~~~~~~~-----~~~~~tp~Gl~~~~~WGs~~~  309 (441)
T 1ia6_A          240 GNTMNENKMQDKWTMCWDDMYVPAALRLAQI--TGK---QIYKDAIEFNFNYWK-----TQVTTTPGGLKWLSNWGVLRY  309 (441)
T ss_dssp             ------CGGGCSSCSSSSCCHHHHHHHHHHH--HCC---HHHHHHHHHHHHHHH-----HTSCBCTTSCBCCCSTTHHHH
T ss_pred             hhhcccccccCCCcCCccchHHHHHHHHHhc--cCc---HHHHHHHHHHHHHHH-----hhcccCCCCceecCCcchHHH
Confidence            1        1346789999999999888764  222   234444444443333     156789999998889999999


Q ss_pred             HHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCCCC
Q 042201          347 VTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGA  426 (511)
Q Consensus       347 a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~~~  426 (511)
                      ++|++||+++|++++               .+++|+++|++|||||||+||+++|||||||+|+|++||||+++||.   
T Consensus       310 ~~~~a~l~~~~~~~~---------------~~~~y~~~A~~qldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~---  371 (441)
T 1ia6_A          310 AAAESMVMLVYCKQN---------------PDQSLLDLAKKQVDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYT---  371 (441)
T ss_dssp             HHHHHHHHHHHHHHS---------------CCHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCC---
T ss_pred             HHHHHHHHHHHHhhc---------------CHHHHHHHHHHHHHHhcCCCCCCceeEEecCCCCCCCCcChhhccCC---
Confidence            999999999998863               24689999999999999999999999999999999999999998864   


Q ss_pred             CCCccccCCCCccccCCCCCCCCCcccceecCCCCCCCcccCcCccccCcccccCchHHHHHHhHhhccCC
Q 042201          427 HPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPDSNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSE  497 (511)
Q Consensus       427 ~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~~  497 (511)
                       +          +.++.|.|||++|+|+||||||..|+|.|+|++|++|||||||||+||++||+|....+
T Consensus       372 -~----------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y~~nEvai~~NA~~v~~la~l~~~~~  431 (441)
T 1ia6_A          372 -Y----------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQYQYTEVALDYNAGLVGVLAGAIKFFG  431 (441)
T ss_dssp             -C----------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCHHHHBCCHHHHHHHHHHHHHHHHHTC
T ss_pred             -c----------cccCCCCCCcccCccceeeCCCCCcCcCcccccccccccchhhhHHHHHHHHHHHHhcC
Confidence             1          13678999999999999999999999999999999999999999999999999988765
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum} Back     alignment and structure
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A Back     alignment and structure
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A* Back     alignment and structure
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum} Back     alignment and structure
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A* Back     alignment and structure
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A* Back     alignment and structure
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 Back     alignment and structure
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A* Back     alignment and structure
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP} Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa} Back     alignment and structure
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A* Back     alignment and structure
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A* Back     alignment and structure
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua} Back     alignment and structure
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3 Back     alignment and structure
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A Back     alignment and structure
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A* Back     alignment and structure
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 511
d1tf4a1460 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E 1e-168
d1g87a1454 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E 1e-159
d1ks8a_433 a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasu 1e-155
d1ia6a_431 a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clos 1e-150
d1ut9a1511 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobios 1e-115
d1clca1441 a.102.1.2 (A:135-575) CelD cellulase, C-terminal d 1e-114
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Length = 460 Back     information, alignment and structure

class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

 Score =  481 bits (1240), Expect = e-168
 Identities = 173/470 (36%), Positives = 248/470 (52%), Gaps = 43/470 (9%)

Query: 39  FAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFG 98
           F Y +AL K++ F+E QRSGKLPE+ RV WRG+S L+DG    ++L GG+YDAGD+VKFG
Sbjct: 4   FNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFG 63

Query: 99  WPMAYSVSLLSWAAVEYQREISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNA 158
           +PMA++ ++L+W A+E         Q+ YL+  +RW  D+ ++AH SP  LY QVGDG+A
Sbjct: 64  FPMAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDA 123

Query: 159 DHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALAAASIVFKKVDSIYSSRLLNHSK 218
           DH+ W   E M   R  +++    PGS+ AAE+AAA+AA+SIVF   D  Y++ L+ H+K
Sbjct: 124 DHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAK 183

Query: 219 SLFEFADKHRGSYQASCP---FYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQ--- 272
            L+ FAD +RG Y    P   FY S+SGYQDEL+W A WLYKA+ D+ YL          
Sbjct: 184 QLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYDFL 243

Query: 273 ------GWSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSV 326
                          +WD+K  G  +LLAKE          +      ++       +  
Sbjct: 244 STEQQTDLRSYRWTIAWDDKSYGTYVLLAKE-----TGKQKYIDDANRWLDYWTVGVNGQ 298

Query: 327 RIETTPGGLLYIRDSSNLQYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAK 386
           R+  +PGG+  +     L+Y  +   +  +Y+K ++                 +   FA 
Sbjct: 299 RVPYSPGGMAVLDTWGALRYAANTAFVALVYAKVIDDP-----------VRKQRYHDFAV 347

Query: 387 SQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSIGAHPAKVSCNDGYSSYYHSSNP 446
            Q++Y LG NP   SY+ GFG+  P   HHR A                 ++    S   
Sbjct: 348 RQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHG--------------SWTDSIASPAE 393

Query: 447 NPNVHVGAIVGGPDS-NDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQ 495
           N +V  GA+VGGP S ND + D R DY   E  T  NA F  ++A L+ +
Sbjct: 394 NRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEE 443
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Length = 454 Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Length = 433 Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Length = 431 Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Length = 511 Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Length = 441 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query511
d1tf4a1460 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1g87a1454 Endo/exocellulase:cellobiose E-4, N-terminal domai 100.0
d1ks8a_433 Endo-b-1,4-glucanase {Termite (Nasutitermes takasa 100.0
d1ia6a_431 Nonprocessive cellulase Cel9M {Clostridium cellulo 100.0
d1clca1441 CelD cellulase, C-terminal domain {Clostridium the 100.0
d1ut9a1511 Cellulose 1,4-beta-cellobiosidase CbhA {Clostridiu 100.0
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 91.25
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 89.8
d1w6ka1448 Lanosterol synthase {Human (Homo sapiens) [TaxId: 88.06
d1fp3a_402 N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) 86.1
d2afaa1411 Putative NAG isomerase YihS {Salmonella typhimuriu 84.91
>d1tf4a1 a.102.1.2 (A:1-460) Endo/exocellulase:cellobiose E-4, N-terminal domain {Thermomonospora fusca [TaxId: 2021]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha/alpha toroid
superfamily: Six-hairpin glycosidases
family: Cellulases catalytic domain
domain: Endo/exocellulase:cellobiose E-4, N-terminal domain
species: Thermomonospora fusca [TaxId: 2021]

Probab=100.00  E-value=8e-106  Score=857.67  Aligned_cols=431  Identities=40%  Similarity=0.725  Sum_probs=378.7

Q ss_pred             chHHHHHHHHHHHHHHHHhhcCCCCCCCCCCccCCCCCCCCCCCccccccceecCCCCcccccchHHHHHHHHHHHHHcH
Q 042201           37 TTFAYRDALGKAILFFEGQRSGKLPESQRVKWRGNSALSDGKPENVNLIGGYYDAGDNVKFGWPMAYSVSLLSWAAVEYQ  116 (511)
Q Consensus        37 ~~~~Y~~~l~~sl~fy~~QR~G~lp~~~~~~w~~~s~~~Dg~~~~~DlsGGWyDAGD~~Ky~~~~a~s~~~L~~~~~e~~  116 (511)
                      .+.+|.++|++||+||++||||.+|+.++++||++||+.||++.++||+|||||||||+||++|+++++++|+|++++||
T Consensus         2 ~~~~Y~~al~~sl~ff~~QRsG~~p~~~~~~wr~~s~~~Dg~~~~~DvsGGWyDAGD~~KY~~~~a~~~~~L~~a~~~~~   81 (460)
T d1tf4a1           2 PAFNYAEALQKSMFFYEAQRSGKLPENNRVSWRGDSGLNDGADVGLDLTGGWYDAGDHVKFGFPMAFTATMLAWGAIESP   81 (460)
T ss_dssp             CSSCHHHHHHHHHHHHHHTBCBSCCTTCCCTTCCCBCTTTTGGGTSCCCCSBCCSSSCCEEHHHHHHHHHHHHHHHHHCH
T ss_pred             CCCCHHHHHHHHHHHHHHccCcCCCcccCCCCCccccCCCcccCcCCCCCCceeCCCcceecccHHHHHHHHHHHHHHCh
Confidence            45789999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhcccchhHHHHHHHHHHHHHHhccCCCCeEEEEcCCCCCCCCCCCCCCCCCCCceEEEeCCCCcchHHHHHHHHHHH
Q 042201          117 REISSVNQLGYLRGAIRWGTDFILRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYRITSDSPGSEAAAESAAALA  196 (511)
Q Consensus       117 ~~~~s~n~~pdiLdE~kwg~D~llkm~~~~g~~y~~Vg~~~~dh~~w~~Pe~~~~~R~~~~~~~~~p~s~~a~~~AAalA  196 (511)
                      +.|+++|++||||||||||+|||+|||+++|.||+|||++..||+.|++|+.++.+|+.+.+..++|+|++++++|||||
T Consensus        82 ~~~~~~~~~pdlLdE~~wglD~llkmq~~~g~~y~qvgdg~~dh~~w~~~~~~~~~~~~~~~~~~~~~t~~~~~~aAalA  161 (460)
T d1tf4a1          82 EGYIRSGQMPYLKDNLRWVNDYFIKAHPSPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMA  161 (460)
T ss_dssp             HHHHHTTCHHHHHHHHHHHHHHHHHTCSBTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHH
T ss_pred             HhhhcCCCcHHHHHHHHHHHHHHHhcccCCCeEEEEecCCCccccccCCCcCCCCCCCcceecCCCccHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999998999999999999999999998888899999999999999


Q ss_pred             HhccccccCCHHHHHHHHHHHHHHHHHHHhcCCCccC---CCCccCCCCcchhHHHHHHHHHHHHcCChhHHHHHHHccC
Q 042201          197 AASIVFKKVDSIYSSRLLNHSKSLFEFADKHRGSYQA---SCPFYCSYSGYQDELLWAAAWLYKASEDNKYLDYVLSNQG  273 (511)
Q Consensus       197 ~as~vfk~~D~~yA~~~l~~A~~a~~~a~~~~~~y~~---~~~~Y~s~~~~~De~~wAAaeLy~aTg~~~Yl~~a~~~~~  273 (511)
                      +|||||+++||+||++||++||++|+||++||+.|.+   .+++|.+.+++.||++|||+|||++|||++|+++++....
T Consensus       162 ~as~v~~~~d~~~A~~~l~aA~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~De~~wAAaeLy~aTG~~~Y~~~a~~~~~  241 (460)
T d1tf4a1         162 ASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDELVWGAYWLYKATGDDSYLAKAEYEYD  241 (460)
T ss_dssp             HHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHGG
T ss_pred             HHHHhccccCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCcCCCccccchHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence            9999999999999999999999999999999998865   2233333388999999999999999999999999987541


Q ss_pred             ---------CCCCCcccCcChhhHHHHhhccccccCCchHHHHHHHHHHHHHHhhcCCCCCcccccCCCCceeecCCChH
Q 042201          274 ---------WSQVASEFSWDNKFAGAQMLLAKEFFGGNKQLSLFKIHVESFVCALMPESSSVRIETTPGGLLYIRDSSNL  344 (511)
Q Consensus       274 ---------~~~~~~~~~Wd~~~~g~~~lla~~~~~~~~~~~~~~~~ad~~~~~~~~~~~~~~~~~t~~g~~w~~~w~n~  344 (511)
                               .......++|+++..++.++|++..  .   ...+++.++.+++.+........++++++++.|...||++
T Consensus       242 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~la~~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WGsn  316 (460)
T d1tf4a1         242 FLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAKET--G---KQKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTWGAL  316 (460)
T ss_dssp             GSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHHHH--C---CHHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSSSHH
T ss_pred             hcccccccccccccccccccchhHHHHHHHHHHh--h---hhHHHHHHHHHHHHHhhhcccccCCcCCCcceecCCCchH
Confidence                     1123346889999888877775432  1   3455666677665544433323567788888888889999


Q ss_pred             HHHHHHHHHHHHHHHHhhhcccCccccCCCCCCHHHHHHHHHhccchhccCCCCCcceEeecCCCCCCCccccCCCCCCC
Q 042201          345 QYVTSATLLLFLYSKTLNTAHINGLQCGSAHFSASQISAFAKSQVDYILGKNPMKMSYMAGFGSKFPLQIHHRGASIPSI  424 (511)
Q Consensus       345 ~~a~n~a~l~~~ya~~l~~~~~~~~~~g~~~~~~~~y~~~a~~qldYlLG~Np~~~SyVtG~G~~~p~~phHR~ss~~~~  424 (511)
                      ++++|.+++++++++++.+.           .++.+|+++|++|||||||+||+++|||||+|+|+|++||||.++|+. 
T Consensus       317 ~~~~n~a~~~~~a~~~~~~~-----------~~~~~y~~~A~~qldylLG~Np~~~SyVtG~G~~~p~~pHHR~s~~~~-  384 (460)
T d1tf4a1         317 RYAANTAFVALVYAKVIDDP-----------VRKQRYHDFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSW-  384 (460)
T ss_dssp             HHHHHHHHHHHHHHHHCCCH-----------HHHHHHHHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTCS-
T ss_pred             HHHHHHHHHHHHHHHHhccc-----------CCHHHHHHHHHHhhheecccCCCCcCCCccCCCCCCCCCcCccccCCC-
Confidence            99999999999988764321           135789999999999999999999999999999999999999987643 


Q ss_pred             CCCCCccccCCCCccccCCCCCCCCCcccceecCCC-CCCCcccCcCccccCcccccCchHHHHHHhHhhccCC
Q 042201          425 GAHPAKVSCNDGYSSYYHSSNPNPNVHVGAIVGGPD-SNDQFKDLRTDYSHAEPTTYMNAAFVGSVAPLLAQSE  497 (511)
Q Consensus       425 ~~~p~~~~c~~g~~~~~~~~~pn~~~~~GalvGGPn-~~~~y~D~~~~y~~nEvaid~NA~~v~~la~l~~~~~  497 (511)
                                   .+.+..+.|||++|+|+|||||| +.+||+|++++|++||||||||||||++||+|++..+
T Consensus       385 -------------~~~~~~~~p~~~~l~G~lvGGPn~~~~~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~  445 (460)
T d1tf4a1         385 -------------TDSIASPAENRHVLYGALVGGPGSPNDAYTDDRQDYVANEVATDYNAGFSSALAMLVEEYG  445 (460)
T ss_dssp             -------------SSCTTSSSSCSSCCTTCBCCCCSSTTCCCCCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHC
T ss_pred             -------------ccccCCCCCCCCCcceeEecCCCCCCCCcCcCcchhhhhhhHHHHHHHHHHHHHHHHHhcC
Confidence                         11356789999999999999998 5899999999999999999999999999999988754
>d1g87a1 a.102.1.2 (A:3-456) Endo/exocellulase:cellobiose E-4, N-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]} Back     information, alignment and structure
>d1ks8a_ a.102.1.2 (A:) Endo-b-1,4-glucanase {Termite (Nasutitermes takasagoensis) [TaxId: 62960]} Back     information, alignment and structure
>d1ia6a_ a.102.1.2 (A:) Nonprocessive cellulase Cel9M {Clostridium cellulolyticum [TaxId: 1521]} Back     information, alignment and structure
>d1clca1 a.102.1.2 (A:135-575) CelD cellulase, C-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d1ut9a1 a.102.1.2 (A:306-816) Cellulose 1,4-beta-cellobiosidase CbhA {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d1w6ka1 a.102.4.2 (A:6-99,A:379-732) Lanosterol synthase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fp3a_ a.102.1.3 (A:) N-acyl-D-glucosamine 2-epimerase {Pig (Sus scrofa) [TaxId: 9823]} Back     information, alignment and structure
>d2afaa1 a.102.1.3 (A:4-415) Putative NAG isomerase YihS {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure