Citrus Sinensis ID: 042277

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------90
MNGPEELKRSNSAFESSVNINSEVEAKQRALLIEWLNSILPNLNFPIKASDEELRACLIDGTVLCQILKRLKPASVDEANYSYNSSMSRSGKIARFLTTLGKLGISRFEMSDLEKGSMKPVINCLLNLRAEYITGGDIRPLTSIITKSGSRQGDVSSPASLSPLFGEERRKVSSDSQFQRGLRSPVMSESSTALLHHVGHKFHEVFQLKQGCYADLPAAKITEMMKSTSLDNAPTQSLLSVVNGILDESVDRKNGEIPHRVACLLRKVVQEIERRISTQADHLRTQNNLFKTREEKYQSRIRVLEALASGTGEETEIVMNQLQQIKTEKSKLEEKKKLEDDDVAKLMKEKDQQMLENLALKQELEMAKKTYELRCLHMETEYKGAKSGFEERIKELEHLLQVSRNKVRELEANSDSKYQRWSRKESIYQSFMDLQHGALRELRFSSDSIKQEISKAQKSHADDLYCLGVRLKALAGAAENYHAVLAENRRLFNEVQDLKGNIRVYCRIRPFLPGQTKKQTTIEYIGENGELIFGNPSKPGKDGQRMFKFNKVFGPDATQAEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSGPHEEDWGVNYRALNDLFNLSQNRRSSIMYEVAVQMVEIYNEQVRDLLTNDVFWILAICFLDLHTLGIMSTSQPNGLAVPDASMHPVTSTEDVLELMDIGLKNRAIGATALNERSSRSHSVVTVHVRGKDLKTGIPLHGNLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDVNSYSESLSTLKFAERVSGVELGAARSSKEGRDVRELMEQVASLKDTIAKKDDEIERLQLLKDLKNVYPGVNSEKRGLNTF
ccccHHHHcccccccccccccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccHHHHHHHccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHcccccHHHHHHHHccccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccccccEEEEcccccEEEcccccccccccEEEEccCCccccccHHHHHHHHHHHHHHHHccccEEEEEccccccccEEEEccccccccccccccHHHHHHHHHHHHHcccccEEEEEEEEEEEEccccccccccccccHHHHHcccccccccccccccccCECcccCEEEcccHHHHHHHHHHHHcccHHHcccccccccccccEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccc
************************EAKQRALLIEWLNSILPNLNFPIKASDEELRACLIDGTVLCQILKRLKPASVDEANYSYNSSMSRSGKIARFLTTLGKLGISRFEMSDLEKGSMKPVINCLLNLRAEYITGGDIRPLTS********************************************************HKFHEVFQLKQGCYADLPAAKITE*************SLLSVVNGILDESVDRKNGEIPHRVACLLRKVVQEIERRISTQADHLRT**NLF*********RIRVLEA************************************************************AKKTYELRCLHMETEYKG***********L*HLL**************************IYQSFMDLQHGALRELR*****************ADDLYCLGVRLKALAGAAENYHAVLAENRRLFNEVQDLKGNIRVYCRIRPFLPGQTKKQTTIEYIGENGELIFG***********MFKFNKVFGPDATQAEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTY*******PHEEDWGVNYRALNDLFNLSQNRRSSIMYEVAVQMVEIYNEQVRDLLTNDVFWILAICFLDLHTLGIMST****GLAVPDASMHPVTSTEDVLELMDIGLKNRAIGATALNERSSRSHSVVTVHVRGKDLKTGIPLHGNLHLVDLAGSERVDR***TGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDVNSYSESLSTLKFAERVSGVELG**********************************LQLL********************
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MNGPEELKRSNSAFESSVNINSEVEAKQRALLIEWLNSILPNLNFPIKASDEELRACLIDGTVLCQILKRLKPASVDEANYSYNSSMSRSGKIARFLTTLGKLGISRFEMSDLEKGSMKPVINCLLNLRAEYITGGDIRPLTSIITKSGSRQGDVSSPASLSPLFGEERRKVSSDSQFQRGLRSPVMSESSTALLHHVGHKFHEVFQLKQGCYADLPAAKITEMMKSTSLDNAPTQSLLSVVNGILDESVDRKNGEIPHRVACLLRKVVQEIERRISTQADHLRTQNNLFKTREEKYQSRIRVLEALASGTGEExxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxYELRCLHMETEYKGAxxxxxxxxxxxxxxxxxxxxxxxxxxxxSDSKYQRWSRKESIYQSFMDLQHGALRELRFSSDSIKQEISKAQKSHADDLYCLGVRLKALAGAAENYHAVLAENRRLFNEVQDLKGNIRVYCRIRPFLPGQTKKQTTIEYIGENGELIFGNPSKPGKDGQRMFKFNKVFGPDATQAEVFSDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSGPHEEDWGVNYRALNDLFNLSQNRRSSIMYEVAVQMVEIYNEQVRDLLTNDVFWILAICFLDLHTLGIMSTSQPNGLAVPDASMHPVTSTEDVLELMDIGLKNRAIGATALNERSSRSHSVVTVHVRGKDLKTGIPLHGNLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSPHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDVNSYSESLSTLKFAERVSGVELGAARSSKEGRDxxxxxxxxxxxxxxxxxxxxxxxxxxxxKDLKNVYPGVNSEKRGLNTF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

No confident close homologs for annotation transfering were detected in SWISSPROT

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 4ETP, chain A
Confidence level:very confident
Coverage over the Query: 478-649,660-838
View the alignment between query and template
View the model in PyMOL
Template: 3COB, chain A
Confidence level:very confident
Coverage over the Query: 499-863
View the alignment between query and template
View the model in PyMOL
Template: 1WYM, chain A
Confidence level:very confident
Coverage over the Query: 27-141
View the alignment between query and template
View the model in PyMOL
Template: 2DFS, chain A
Confidence level:very confident
Coverage over the Query: 358-379
View the alignment between query and template
View the model in PyMOL
Template: 4ETP, chain B
Confidence level:probable
Coverage over the Query: 454-470,485-588,606-649,669-749,770-778,790-820
View the alignment between query and template
View the model in PyMOL
Template: 3TNU, chain B
Confidence level:probable
Coverage over the Query: 389-464
View the alignment between query and template
View the model in PyMOL
Template: 1DEQ, chain A
Confidence level:probable
Coverage over the Query: 254-286
View the alignment between query and template
View the model in PyMOL