Citrus Sinensis ID: 042287


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------
TLTLDSCCLPQFGRERVSQQQQQQQRPTRLLKRSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK
cCECccccccccccHHHHHHHHHcccHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHccccEEEcEEccccccccccccc
TLTLDSCCLPQFGRERVSQQQQQQQRPTRLLKRSAMGKVHGSLARAGK***********************RMQYNRRFVTAVVGF***********
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
TLTLDSCCLPQFGRERVSQQQQQQQRPTRLLKRSAMGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
40S ribosomal protein S30 confidentP49689
40S ribosomal protein S30 probableP62867
40S ribosomal protein S30 probableO42952

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3IZ6, chain Z
Confidence level:very confident
Coverage over the Query: 36-97
View the alignment between query and template
View the model in PyMOL
Template: 2XZM, chain 9
Confidence level:confident
Coverage over the Query: 59-70
View the alignment between query and template
View the model in PyMOL